Query 042181
Match_columns 417
No_of_seqs 123 out of 139
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 05:43:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042181.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042181hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i18_A LMO2051 protein; alpha- 98.4 2.1E-07 7.2E-12 76.1 5.6 45 11-55 5-49 (100)
2 2kjp_A Uncharacterized protein 98.3 2.6E-07 8.8E-12 75.1 3.2 43 13-55 1-43 (91)
3 2eaq_A LIM domain only protein 98.2 7.8E-07 2.7E-11 70.4 4.3 46 11-56 26-74 (90)
4 2kl1_A YLBL protein; structure 98.2 8.2E-07 2.8E-11 72.0 4.4 45 12-56 4-48 (94)
5 2jxo_A Ezrin-radixin-moesin-bi 98.2 1.6E-06 5.3E-11 69.8 4.5 43 13-55 33-78 (98)
6 2i6v_A General secretion pathw 98.1 9.9E-07 3.4E-11 70.2 3.0 52 5-56 9-63 (87)
7 2l97_A HTRA, putative serine p 98.1 2.9E-06 9.9E-11 73.1 6.0 45 12-56 56-100 (134)
8 2pkt_A PDZ and LIM domain prot 98.1 1.4E-06 4.8E-11 69.2 3.4 43 13-55 27-72 (91)
9 2he4_A Na(+)/H(+) exchange reg 98.1 1.9E-06 6.5E-11 68.3 4.1 43 13-55 28-73 (90)
10 2pa1_A PDZ and LIM domain prot 98.1 1.8E-06 6.1E-11 68.1 3.9 43 13-55 26-71 (87)
11 2pzd_A Serine protease HTRA2; 98.1 2.2E-06 7.4E-11 70.9 4.3 44 12-55 34-78 (113)
12 1mfg_A ERB-B2 interacting prot 98.1 5.1E-06 1.8E-10 66.4 6.0 37 11-47 33-69 (95)
13 2fcf_A Multiple PDZ domain pro 98.0 3E-06 1E-10 68.6 4.2 43 13-55 39-85 (103)
14 2eeh_A PDZ domain-containing p 98.0 2.8E-06 9.4E-11 68.9 3.9 44 12-56 35-79 (100)
15 2v90_A PDZ domain-containing p 98.0 2.5E-06 8.4E-11 68.4 3.6 43 13-55 30-75 (96)
16 2dls_A PDZ-rhogef, RHO guanine 98.0 6.2E-06 2.1E-10 66.1 5.7 44 12-56 28-72 (93)
17 2d90_A PDZ domain containing p 98.0 6.3E-06 2.2E-10 66.8 5.8 44 12-55 29-75 (102)
18 2p3w_A Probable serine proteas 98.0 3.6E-06 1.2E-10 69.6 4.3 44 12-55 34-78 (112)
19 2vsp_A PDZ domain-containing p 98.0 1.8E-06 6.1E-11 68.7 2.3 44 12-55 26-72 (91)
20 3r68_A Na(+)/H(+) exchange reg 98.0 2.8E-06 9.6E-11 67.7 3.3 43 14-56 30-75 (95)
21 2rcz_A Tight junction protein 98.0 4.2E-06 1.4E-10 64.2 4.2 43 13-55 21-67 (81)
22 3sfj_A TAX1-binding protein 3; 98.0 3.5E-06 1.2E-10 68.4 3.8 43 12-54 44-89 (104)
23 2jil_A GRIP1 protein, glutamat 98.0 3.9E-06 1.3E-10 67.3 4.0 45 12-56 31-79 (97)
24 1g9o_A NHE-RF; PDZ domain, com 98.0 5E-06 1.7E-10 65.9 4.5 43 13-55 27-72 (91)
25 1wh1_A KIAA1095 protein; PDZ d 98.0 3.5E-06 1.2E-10 71.2 3.9 43 13-55 48-92 (124)
26 2hga_A Conserved protein MTH13 98.0 7.2E-06 2.5E-10 70.4 5.8 50 6-55 18-67 (125)
27 2h2b_A Tight junction protein 98.0 7.4E-06 2.5E-10 66.9 5.6 43 12-54 38-80 (107)
28 2ego_A General receptor for ph 98.0 4.4E-06 1.5E-10 67.2 4.1 45 12-56 36-83 (96)
29 1vb7_A PDZ and LIM domain 2; P 98.0 2.6E-06 9E-11 68.3 2.7 44 12-55 29-75 (94)
30 3cyy_A Tight junction protein 98.0 5.2E-06 1.8E-10 65.6 4.3 43 13-55 23-69 (92)
31 2edz_A PDZ domain-containing p 98.0 6.1E-06 2.1E-10 68.5 4.9 44 12-55 37-83 (114)
32 2w4f_A Protein LAP4; structura 98.0 3.8E-06 1.3E-10 67.2 3.5 41 11-51 32-73 (97)
33 2kv8_A RGS12, regulator of G-p 98.0 4.8E-06 1.6E-10 65.0 3.8 43 12-54 22-67 (83)
34 3ngh_A PDZ domain-containing p 98.0 3.5E-06 1.2E-10 68.7 3.1 44 12-55 25-71 (106)
35 2uzc_A Human pdlim5, PDZ and L 97.9 4.8E-06 1.6E-10 65.6 3.6 44 12-55 26-72 (88)
36 1n7t_A 99-MER peptide of densi 97.9 7.6E-06 2.6E-10 66.5 4.7 44 11-54 41-86 (103)
37 3khf_A Microtubule-associated 97.9 6E-06 2E-10 66.5 4.0 42 14-55 35-79 (99)
38 3bpu_A Membrane-associated gua 97.9 1.3E-05 4.3E-10 63.3 5.8 42 13-55 27-70 (88)
39 1wi2_A Riken cDNA 2700099C19; 97.9 6.9E-06 2.4E-10 67.1 4.4 45 12-56 40-87 (104)
40 2q9v_A Membrane-associated gua 97.9 8.4E-06 2.9E-10 64.4 4.7 45 12-56 26-74 (90)
41 1v5l_A PDZ and LIM domain 3; a 97.9 6E-06 2.1E-10 67.3 3.9 43 13-55 29-74 (103)
42 3tsv_A Tight junction protein 97.9 5.4E-06 1.8E-10 70.6 3.7 44 12-55 50-96 (124)
43 2iwq_A Multiple PDZ domain pro 97.9 8.3E-06 2.8E-10 69.4 4.6 45 12-56 58-106 (123)
44 1ihj_A INAD; intermolecular di 97.9 7.1E-06 2.4E-10 65.8 3.9 43 13-55 37-83 (98)
45 2i04_A Membrane-associated gua 97.9 9.2E-06 3.1E-10 63.5 4.4 44 12-55 24-71 (85)
46 1q3o_A Shank1; PDZ, GKAP, pept 97.9 8.5E-06 2.9E-10 67.0 4.3 43 13-55 45-90 (109)
47 2vz5_A TAX1-binding protein 3; 97.9 8.7E-06 3E-10 70.7 4.4 43 12-54 63-108 (139)
48 1rgw_A ZAsp protein; PDZ, cyph 97.9 6.1E-06 2.1E-10 64.4 3.1 43 12-54 24-69 (85)
49 2ejy_A 55 kDa erythrocyte memb 97.9 7.8E-06 2.7E-10 67.4 3.8 44 12-55 35-82 (97)
50 1uep_A Membrane associated gua 97.9 1.7E-05 5.7E-10 64.7 5.6 45 12-56 33-81 (103)
51 1wha_A KIAA0147 protein, scrib 97.9 8.5E-06 2.9E-10 66.5 3.8 43 12-54 37-83 (105)
52 1uez_A KIAA1526 protein; PDZ d 97.9 8.2E-06 2.8E-10 66.0 3.5 44 12-56 34-78 (101)
53 2e7k_A Maguk P55 subfamily mem 97.8 1.2E-05 4.3E-10 64.4 4.5 44 12-55 28-74 (91)
54 2f5y_A Regulator of G-protein 97.8 1.2E-05 3.9E-10 64.1 4.3 44 12-55 23-69 (91)
55 2q3g_A PDZ and LIM domain prot 97.8 9.7E-06 3.3E-10 64.0 3.8 43 12-54 26-71 (89)
56 2edv_A FERM and PDZ domain-con 97.8 6.8E-06 2.3E-10 66.5 2.9 44 12-56 30-73 (96)
57 1x5q_A LAP4 protein; PDZ domai 97.8 8.3E-06 2.8E-10 67.0 3.3 40 11-50 44-84 (110)
58 2yt7_A Amyloid beta A4 precurs 97.8 2.3E-05 7.7E-10 63.8 5.9 43 14-56 38-84 (101)
59 1qav_A Alpha-1 syntrophin (res 97.8 9.4E-06 3.2E-10 64.3 3.3 43 12-55 29-73 (90)
60 2kjd_A Sodium/hydrogen exchang 97.8 1.4E-05 4.9E-10 67.2 4.6 43 13-55 33-78 (128)
61 2i1n_A Discs, large homolog 3; 97.8 1.3E-05 4.4E-10 64.9 4.1 43 12-54 33-79 (102)
62 2fe5_A Presynaptic protein SAP 97.8 1.6E-05 5.4E-10 63.1 4.6 43 12-54 32-78 (94)
63 2z17_A Pleckstrin homology SEC 97.8 9.7E-06 3.3E-10 66.1 3.4 45 12-56 47-94 (104)
64 2jre_A C60-1 PDZ domain peptid 97.8 1.2E-05 4.1E-10 65.7 3.9 44 12-55 43-90 (108)
65 1m5z_A GRIP, AMPA receptor int 97.8 9.2E-06 3.1E-10 64.3 3.0 37 12-48 31-68 (91)
66 3id1_A Regulator of sigma E pr 97.8 1.2E-05 4E-10 65.4 3.6 42 15-56 4-46 (95)
67 2yub_A LIMK-2, LIM domain kina 97.8 1.1E-05 3.8E-10 68.4 3.4 44 12-55 43-91 (118)
68 1uit_A Human discs large 5 pro 97.8 1.1E-05 3.6E-10 67.2 3.2 43 12-54 41-84 (117)
69 1d5g_A Human phosphatase HPTP1 97.8 1.7E-05 5.7E-10 63.4 4.1 43 12-54 32-78 (96)
70 3cbz_A Dishevelled-2; PDZ doma 97.8 1.9E-05 6.4E-10 65.3 4.5 45 12-56 32-80 (108)
71 2qg1_A Multiple PDZ domain pro 97.8 1.7E-05 5.8E-10 62.8 4.0 43 12-54 28-74 (92)
72 1x5n_A Harmonin; PDZ domain, u 97.8 3.1E-05 1.1E-09 63.9 5.7 43 12-54 40-85 (114)
73 4e34_A Golgi-associated PDZ an 97.8 1.6E-05 5.5E-10 62.4 3.8 43 12-54 27-73 (87)
74 3o46_A Maguk P55 subfamily mem 97.8 2.3E-05 7.8E-10 62.5 4.7 44 12-55 27-74 (93)
75 1va8_A Maguk P55 subfamily mem 97.8 2.1E-05 7.2E-10 65.4 4.6 44 12-55 47-94 (113)
76 1qau_A Neuronal nitric oxide s 97.8 2.1E-05 7.3E-10 64.6 4.6 43 13-55 26-72 (112)
77 3e17_A Tight junction protein 97.8 2E-05 6.9E-10 62.8 4.3 44 12-55 20-67 (88)
78 2ehr_A INAD-like protein; PDZ 97.8 3.1E-05 1.1E-09 64.3 5.6 42 13-55 50-93 (117)
79 2koj_A Partitioning defective 97.8 1.9E-05 6.6E-10 64.8 4.2 43 13-55 39-85 (111)
80 2dmz_A INAD-like protein; PDZ 97.7 1.7E-05 5.6E-10 67.1 3.9 45 12-56 45-93 (129)
81 1ueq_A Membrane associated gua 97.7 2E-05 6.9E-10 66.4 4.3 44 12-55 43-90 (123)
82 2vwr_A Ligand of NUMB protein 97.7 1.3E-05 4.6E-10 64.0 3.0 36 12-47 28-65 (95)
83 2i4s_A General secretion pathw 97.7 1.3E-05 4.4E-10 65.9 3.0 44 13-56 37-81 (105)
84 2awx_A Synapse associated prot 97.7 1.9E-05 6.4E-10 64.5 3.9 43 12-55 32-76 (105)
85 3kzd_A TIAM-1, T-lymphoma inva 97.7 2.1E-05 7.2E-10 65.1 4.1 43 13-55 35-80 (94)
86 3qik_A Phosphatidylinositol 3, 97.7 2.8E-05 9.6E-10 65.6 4.9 45 12-56 38-85 (101)
87 2o2t_A Multiple PDZ domain pro 97.7 1.4E-05 4.8E-10 66.3 3.0 44 12-55 48-96 (117)
88 2eeg_A PDZ and LIM domain prot 97.7 1.2E-05 4E-10 64.5 2.4 36 12-47 31-67 (94)
89 2opg_A Multiple PDZ domain pro 97.7 2.5E-05 8.4E-10 62.6 4.3 36 13-48 30-67 (98)
90 2qbw_A PDZ-fibronectin fusion 97.7 3.3E-05 1.1E-09 68.8 5.6 44 11-55 22-65 (195)
91 1uf1_A KIAA1526 protein; PDZ d 97.7 1.9E-05 6.6E-10 66.7 3.8 44 12-56 45-89 (128)
92 1n7e_A AMPA receptor interacti 97.7 2.3E-05 7.9E-10 62.9 4.1 42 13-54 30-75 (97)
93 3qe1_A Sorting nexin-27, G pro 97.7 2.6E-05 9E-10 63.6 4.4 42 14-55 44-88 (107)
94 2vsv_A Rhophilin-2; scaffold p 97.7 2.3E-05 7.8E-10 65.9 4.1 44 12-55 43-89 (109)
95 2fne_A Multiple PDZ domain pro 97.7 2E-05 6.9E-10 66.3 3.8 44 12-55 52-99 (117)
96 1q7x_A PDZ2B domain of PTP-BAS 97.7 2.3E-05 7.8E-10 64.2 4.0 44 12-55 41-88 (108)
97 2jik_A Synaptojanin-2 binding 97.7 2.6E-05 8.9E-10 62.9 4.2 43 12-54 36-82 (101)
98 2kom_A Partitioning defective 97.7 3E-05 1E-09 65.4 4.6 43 13-55 58-104 (121)
99 2gzv_A PRKCA-binding protein; 97.7 2.7E-05 9.3E-10 65.2 4.3 43 13-55 50-96 (114)
100 2dkr_A LIN-7 homolog B; LIN-7B 97.7 2.9E-05 9.9E-10 61.5 4.3 43 12-54 29-75 (93)
101 1v5q_A GRIP1 homolog, glutamat 97.7 2.5E-05 8.5E-10 65.8 4.1 45 12-56 44-92 (122)
102 2qkv_A Inactivation-NO-after-p 97.7 1.8E-05 6.1E-10 63.9 3.1 36 12-47 30-67 (96)
103 1kwa_A Hcask/LIN-2 protein; PD 97.7 2.7E-05 9.4E-10 62.0 4.1 44 13-56 25-72 (88)
104 2la8_A Inactivation-NO-after-p 97.7 1.8E-05 6E-10 65.7 3.0 37 12-48 24-62 (106)
105 2djt_A Unnamed protein product 97.7 2.7E-05 9.1E-10 63.2 4.0 43 12-54 37-83 (104)
106 1y7n_A Amyloid beta A4 precurs 97.7 3E-05 1E-09 62.5 4.3 42 13-55 32-76 (90)
107 2byg_A Channel associated prot 97.7 3.4E-05 1.2E-09 64.8 4.6 43 12-54 53-99 (117)
108 3i4w_A Disks large homolog 4; 97.7 3.2E-05 1.1E-09 62.5 4.3 42 13-54 35-80 (104)
109 2dlu_A INAD-like protein; PDZ 97.7 3.3E-05 1.1E-09 63.5 4.4 44 12-55 37-84 (111)
110 2cs5_A Tyrosine-protein phosph 97.7 4.1E-05 1.4E-09 63.8 4.9 42 13-54 41-87 (119)
111 1te0_A Protease DEGS; two doma 97.6 5.2E-05 1.8E-09 73.5 6.3 44 12-55 243-287 (318)
112 3gsl_A Disks large homolog 4; 97.6 3.3E-05 1.1E-09 68.0 4.4 44 12-55 129-176 (196)
113 2zpm_A Regulator of sigma E pr 97.6 1.5E-05 5E-10 63.1 1.9 42 14-55 5-47 (91)
114 2r4h_A Membrane-associated gua 97.6 3E-05 1E-09 64.3 3.9 42 12-54 48-91 (112)
115 1uew_A Membrane associated gua 97.6 5.6E-05 1.9E-09 62.6 5.3 43 14-56 44-90 (114)
116 1vae_A Rhophilin 2, rhophilin, 97.6 2.5E-05 8.7E-10 65.4 3.3 45 12-56 35-82 (111)
117 2csj_A TJP2 protein; PDZ domai 97.6 2.4E-05 8.4E-10 65.1 3.2 43 12-54 45-89 (117)
118 2eno_A Synaptojanin-2-binding 97.6 3.5E-05 1.2E-09 64.4 4.0 43 12-54 46-92 (120)
119 1whd_A RGS3, regulator of G-pr 97.6 1.9E-05 6.4E-10 64.2 2.2 44 12-55 35-81 (100)
120 4amh_A Disks large homolog 1; 97.6 4.4E-05 1.5E-09 62.9 4.4 43 12-54 31-77 (106)
121 1wf7_A Enigma homologue protei 97.6 2.2E-05 7.5E-10 63.9 2.5 36 12-47 28-64 (103)
122 1x6d_A Interleukin-16; PDZ dom 97.6 2.5E-05 8.7E-10 65.1 2.9 43 13-55 42-88 (119)
123 2iwn_A Multiple PDZ domain pro 97.6 4.3E-05 1.5E-09 60.6 4.1 36 12-47 32-69 (97)
124 1lcy_A HTRA2 serine protease; 97.6 3.6E-05 1.2E-09 75.1 4.3 44 12-55 255-299 (325)
125 3l4f_D SH3 and multiple ankyri 97.6 6.9E-05 2.3E-09 64.4 5.6 43 13-55 65-110 (132)
126 1um1_A KIAA1849 protein, RSGI 97.6 4.2E-05 1.4E-09 62.8 4.0 42 12-54 35-78 (110)
127 2yuy_A RHO GTPase activating p 97.6 1.2E-05 4.1E-10 68.1 0.7 44 12-55 60-106 (126)
128 3axa_A Afadin, nectin-3, prote 97.6 4.3E-05 1.5E-09 62.3 3.9 42 12-54 37-80 (106)
129 2d8i_A T-cell lymphoma invasio 97.6 3.6E-05 1.2E-09 65.1 3.4 42 13-54 44-88 (114)
130 3b76_A E3 ubiquitin-protein li 97.6 5.3E-05 1.8E-09 64.1 4.3 43 13-55 53-99 (118)
131 1uju_A Scribble; PDZ domain, c 97.6 2.1E-05 7.2E-10 64.8 1.7 43 12-54 43-89 (111)
132 1wf8_A Neurabin-I; PDZ domain, 97.6 4.2E-05 1.4E-09 62.6 3.5 43 12-54 39-85 (107)
133 1y8t_A Hypothetical protein RV 97.5 9.5E-05 3.3E-09 71.6 6.4 44 12-55 241-285 (324)
134 2g5m_B Neurabin-2; spinophilin 97.5 4.8E-05 1.6E-09 62.7 3.7 37 12-48 34-72 (113)
135 2dm8_A INAD-like protein; PDZ 97.5 3.2E-05 1.1E-09 64.0 2.6 42 13-54 43-88 (116)
136 3stj_A Protease DEGQ; serine p 97.5 4.4E-05 1.5E-09 75.5 4.0 44 12-55 262-306 (345)
137 1nf3_C PAR-6B; semi-CRIB motif 97.5 5.7E-05 2E-09 64.1 4.1 44 12-55 64-111 (128)
138 2dc2_A GOPC, golgi associated 97.5 3.8E-05 1.3E-09 62.8 2.8 43 13-56 35-79 (103)
139 1tp5_A Presynaptic density pro 97.5 4.6E-05 1.6E-09 63.3 3.3 37 13-49 38-76 (119)
140 2db5_A INAD-like protein; PDZ 97.5 4.5E-05 1.5E-09 64.5 3.2 43 13-55 54-101 (128)
141 2eei_A PDZ domain-containing p 97.5 4.2E-05 1.4E-09 62.2 2.9 43 12-54 31-76 (106)
142 1wfv_A Membrane associated gua 97.5 3.2E-05 1.1E-09 62.4 2.2 42 13-54 36-81 (103)
143 1v62_A KIAA1719 protein; struc 97.5 5.6E-05 1.9E-09 63.2 3.8 42 14-55 43-88 (117)
144 3hpk_A Protein interacting wit 97.5 8.2E-05 2.8E-09 62.6 4.6 44 12-55 44-91 (125)
145 1w9e_A Syntenin 1; cell adhesi 97.5 5.9E-05 2E-09 66.2 3.7 43 12-54 26-70 (166)
146 3nfk_A Tyrosine-protein phosph 97.5 6.6E-05 2.2E-09 61.2 3.7 43 13-55 43-90 (107)
147 1b8q_A Protein (neuronal nitri 97.5 4E-05 1.4E-09 64.5 2.4 43 13-55 33-79 (127)
148 1i16_A Interleukin 16, LCF; cy 97.5 8.8E-05 3E-09 63.3 4.4 44 12-56 56-101 (130)
149 1wif_A RSGI RUH-020, riken cDN 97.5 7.7E-05 2.6E-09 64.5 4.1 45 11-55 47-95 (126)
150 2daz_A INAD-like protein; PDZ 97.5 7E-05 2.4E-09 63.0 3.6 35 13-47 51-87 (124)
151 2kpk_A Membrane-associated gua 97.4 9.2E-05 3.1E-09 63.0 4.3 44 13-56 43-90 (129)
152 1wfg_A Regulating synaptic mem 97.4 8.3E-05 2.8E-09 63.7 3.9 43 14-56 66-112 (131)
153 1ujd_A KIAA0559 protein; PDZ d 97.4 9.1E-05 3.1E-09 61.8 4.0 41 14-54 50-94 (117)
154 2d92_A INAD-like protein; PDZ 97.4 8.2E-05 2.8E-09 61.2 3.6 43 12-54 43-89 (108)
155 1p1d_A PDZ45, glutamate recept 97.4 7.9E-05 2.7E-09 67.0 3.7 45 12-56 134-182 (196)
156 3k1r_A Harmonin; protein-prote 97.4 7E-05 2.4E-09 67.7 3.4 43 12-54 109-154 (192)
157 3rle_A Golgi reassembly-stacki 97.4 5.3E-05 1.8E-09 69.5 2.6 44 12-55 15-60 (209)
158 1uhp_A Hypothetical protein KI 97.4 0.00011 3.7E-09 60.1 4.1 42 12-54 40-83 (107)
159 1wg6_A Hypothetical protein (r 97.4 0.00012 4.1E-09 62.3 4.2 43 13-55 55-101 (127)
160 1wi4_A Synip, syntaxin binding 97.4 0.00012 4.2E-09 60.6 3.9 43 13-55 41-87 (109)
161 2edp_A Fragment, shroom family 97.3 5.4E-05 1.9E-09 61.4 1.7 36 12-47 34-71 (100)
162 2iwo_A Multiple PDZ domain pro 97.3 9.3E-05 3.2E-09 62.5 3.0 42 12-54 52-95 (120)
163 3r0h_A INAD, inactivation-NO-a 97.3 0.00014 4.7E-09 65.2 4.0 44 12-55 135-182 (206)
164 3gsl_A Disks large homolog 4; 97.3 9.3E-05 3.2E-09 65.1 2.6 37 12-48 34-72 (196)
165 2lob_A Golgi-associated PDZ an 96.4 3.7E-05 1.3E-09 64.4 0.0 42 13-54 53-98 (112)
166 2qt5_A Glutamate receptor-inte 97.3 0.00016 5.6E-09 64.8 4.2 44 12-55 134-181 (200)
167 4a8c_A Periplasmic PH-dependen 97.3 0.00019 6.6E-09 72.9 5.0 43 13-55 363-406 (436)
168 1um7_A Synapse-associated prot 97.3 6.8E-05 2.3E-09 61.4 1.2 43 12-54 38-84 (113)
169 3qo6_A Protease DO-like 1, chl 97.3 0.00011 3.7E-09 72.4 2.8 43 13-55 251-305 (348)
170 3r0h_A INAD, inactivation-NO-a 97.2 0.00019 6.5E-09 64.3 4.1 34 13-46 45-80 (206)
171 3rle_A Golgi reassembly-stacki 97.2 0.00012 4E-09 67.2 2.7 43 13-56 112-156 (209)
172 4a8c_A Periplasmic PH-dependen 97.2 0.00023 7.8E-09 72.4 5.1 44 12-55 262-306 (436)
173 1ujv_A Membrane associated gua 97.2 0.00046 1.6E-08 55.8 5.5 43 12-55 31-75 (96)
174 3pv2_A DEGQ; trypsin fold, PDZ 97.2 0.00017 5.9E-09 73.8 3.7 43 13-55 386-429 (451)
175 3pv2_A DEGQ; trypsin fold, PDZ 97.2 0.00023 7.8E-09 72.9 4.3 44 13-56 282-326 (451)
176 2krg_A Na(+)/H(+) exchange reg 97.1 0.00014 4.7E-09 68.1 2.2 43 14-56 34-79 (216)
177 1p1d_A PDZ45, glutamate recept 97.1 0.00025 8.6E-09 63.7 3.6 44 12-55 35-82 (196)
178 3num_A Serine protease HTRA1; 97.1 7.6E-05 2.6E-09 72.8 0.0 44 12-55 253-297 (332)
179 2qt5_A Glutamate receptor-inte 97.1 0.00035 1.2E-08 62.7 4.1 44 12-55 32-79 (200)
180 3egg_C Spinophilin; PP1, serin 97.0 0.00045 1.6E-08 62.2 4.2 44 12-55 110-157 (170)
181 1v6b_A Harmonin isoform A1; st 97.0 0.00048 1.6E-08 57.7 4.0 43 14-56 44-90 (118)
182 4fgm_A Aminopeptidase N family 97.0 0.00034 1.2E-08 74.3 3.7 43 12-55 495-538 (597)
183 3tsz_A Tight junction protein 96.9 0.00049 1.7E-08 69.5 3.9 44 12-55 30-76 (391)
184 1ky9_A Protease DO, DEGP, HTRA 96.9 0.00038 1.3E-08 71.2 2.8 44 12-55 285-329 (448)
185 4fln_A Protease DO-like 2, chl 96.8 0.001 3.5E-08 70.2 5.6 45 12-56 414-459 (539)
186 1ufx_A KIAA1526 protein; PDZ d 96.8 0.00057 1.9E-08 56.1 2.8 42 15-56 34-79 (103)
187 1fc6_A Photosystem II D1 prote 96.7 0.00089 3E-08 66.8 4.0 43 12-54 98-143 (388)
188 4fln_A Protease DO-like 2, chl 96.6 0.001 3.5E-08 70.2 3.8 38 12-49 276-313 (539)
189 3shw_A Tight junction protein 96.6 0.0011 3.9E-08 68.7 4.1 45 12-56 22-69 (468)
190 1ky9_A Protease DO, DEGP, HTRA 96.5 0.00042 1.4E-08 70.9 0.0 44 12-55 382-426 (448)
191 1z87_A Alpha-1-syntrophin; pro 96.5 0.0014 4.7E-08 63.3 3.4 43 13-55 103-149 (263)
192 1r6j_A Syntenin 1; PDZ, membra 96.4 0.0016 5.6E-08 52.3 2.8 41 13-54 24-67 (82)
193 2xkx_A Disks large homolog 4; 96.3 0.0035 1.2E-07 67.6 5.4 45 12-56 330-378 (721)
194 1w9e_A Syntenin 1; cell adhesi 96.1 0.0023 7.9E-08 56.0 2.4 35 13-48 108-143 (166)
195 3k50_A Putative S41 protease; 95.9 0.0028 9.7E-08 64.4 2.5 35 14-48 91-126 (403)
196 2xkx_A Disks large homolog 4; 95.8 0.0073 2.5E-07 65.1 5.2 44 12-55 183-230 (721)
197 3suz_A Amyloid beta A4 precurs 95.7 0.0024 8.1E-08 64.1 0.9 43 13-55 232-278 (388)
198 3suz_A Amyloid beta A4 precurs 94.7 0.0053 1.8E-07 61.5 0.0 41 15-55 317-360 (388)
199 3soe_A Membrane-associated gua 94.5 0.059 2E-06 45.8 6.0 44 12-56 33-78 (113)
200 3gge_A PDZ domain-containing p 94.3 0.022 7.7E-07 47.3 2.9 43 14-56 29-75 (95)
201 1k32_A Tricorn protease; prote 94.2 0.037 1.3E-06 60.4 5.2 44 11-55 746-800 (1045)
202 3b4r_A Putative zinc metallopr 94.0 0.044 1.5E-06 51.5 4.5 36 259-294 124-159 (224)
203 1gyt_A Cytosol aminopeptidase; 33.3 23 0.00079 37.1 3.1 33 16-48 318-352 (503)
204 1lam_A Leucine aminopeptidase; 30.0 25 0.00085 36.7 2.6 33 16-48 298-332 (484)
205 3ij3_A Cytosol aminopeptidase; 29.6 29 0.001 36.3 3.1 33 16-48 298-332 (482)
206 3jru_B Probable cytosol aminop 29.5 29 0.001 36.3 3.1 33 16-48 310-344 (490)
207 3pei_A Cytosol aminopeptidase; 29.0 27 0.00092 36.5 2.7 34 16-49 299-334 (486)
208 2xpn_B SPT6, chromatin structu 28.9 23 0.00079 22.8 1.3 13 386-398 2-14 (26)
209 3dor_A Protein CT_858, CPAF; m 28.5 57 0.002 34.9 5.1 31 12-45 95-125 (583)
210 3kzw_A Cytosol aminopeptidase; 28.0 32 0.0011 36.3 3.1 33 16-48 331-365 (515)
211 3h8g_F Cytosol aminopeptidase; 27.7 29 0.00098 36.4 2.6 33 16-48 315-349 (497)
212 2hc9_A Leucine aminopeptidase 27.6 33 0.0011 36.0 3.0 32 16-47 300-333 (491)
213 4efd_A Aminopeptidase; structu 25.0 38 0.0013 35.8 3.0 33 16-48 338-372 (522)
214 3kr4_A M17 leucyl aminopeptida 24.1 41 0.0014 35.5 3.0 33 16-48 342-376 (528)
No 1
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.44 E-value=2.1e-07 Score=76.08 Aligned_cols=45 Identities=24% Similarity=0.521 Sum_probs=42.9
Q ss_pred eCCceEEEEeCCCCCCCCCCCCCCeEEeeCCeecCChhhHHHHHH
Q 042181 11 QCEGTMVLDVPSTSPLSGYLSPGDVIVSLDGIHIHNEQDWMEVAA 55 (417)
Q Consensus 11 ~g~Gv~V~~V~~~SPl~ggL~~GDvI~sINgc~V~~~~dW~~cL~ 55 (417)
...|++|.+|.++|||++||++||+|++|||.+|.+.+++.+.|.
T Consensus 5 ~~~Gv~V~~V~~~spA~~GL~~GD~I~~Ing~~v~~~~dl~~~l~ 49 (100)
T 3i18_A 5 TYDGVYVMSVKDDVPAADVLHAGDLITEIDGNAFKSSQEFIDYIH 49 (100)
T ss_dssp CCCCEEEEEECTTSGGGGTCCTTCEEEEETTBCCSSHHHHHHHHH
T ss_pred eCCCEEEEEeCCCCchHHCCCCCCEEEEECCEECCCHHHHHHHHH
Confidence 478999999999999999999999999999999999999999995
No 2
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.31 E-value=2.6e-07 Score=75.07 Aligned_cols=43 Identities=23% Similarity=0.417 Sum_probs=40.5
Q ss_pred CceEEEEeCCCCCCCCCCCCCCeEEeeCCeecCChhhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSGYLSPGDVIVSLDGIHIHNEQDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~ggL~~GDvI~sINgc~V~~~~dW~~cL~ 55 (417)
+|++|.+|.++|||+.+|++||+|++|||.+|.+.+++.+.+.
T Consensus 1 ~Gv~V~~V~~~spA~~GL~~GD~I~~InG~~v~~~~~l~~~l~ 43 (91)
T 2kjp_A 1 NGIYASSVVENMPAKGKIEVGDKIISADGKNYQSAEKLIDYIS 43 (91)
T ss_dssp CCSSCCCCCCSSCCSSCCCSSCEEEEETTBCCSSHHHHHHHHS
T ss_pred CceEEEEECCCChHHHcCCCCCEEEEECCEECCCHHHHHHHHH
Confidence 4899999999999999999999999999999999999998883
No 3
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.23 E-value=7.8e-07 Score=70.41 Aligned_cols=46 Identities=24% Similarity=0.419 Sum_probs=41.9
Q ss_pred eCCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeec--CChhhHHHHHHh
Q 042181 11 QCEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHI--HNEQDWMEVAAL 56 (417)
Q Consensus 11 ~g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V--~~~~dW~~cL~~ 56 (417)
...|++|..|.++|||+. ||++||+|++|||.+| .+.+++.+.+..
T Consensus 26 ~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~ 74 (90)
T 2eaq_A 26 DIPGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAK 74 (90)
T ss_dssp ETTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHHHHHHHHH
T ss_pred cCCCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHHHHHHHHh
Confidence 367999999999999998 8999999999999999 888999888853
No 4
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.23 E-value=8.2e-07 Score=72.03 Aligned_cols=45 Identities=27% Similarity=0.460 Sum_probs=42.2
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCeEEeeCCeecCChhhHHHHHHh
Q 042181 12 CEGTMVLDVPSTSPLSGYLSPGDVIVSLDGIHIHNEQDWMEVAAL 56 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~ggL~~GDvI~sINgc~V~~~~dW~~cL~~ 56 (417)
..|++|.+|.++|||+.+|++||+|++|||.+|.+.+++.+.+..
T Consensus 4 ~~Gv~V~~V~~~spA~~GL~~GD~Il~InG~~v~~~~~l~~~l~~ 48 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAGRLEAGDRIAAIDGQPINTSEQIVSYVRE 48 (94)
T ss_dssp CCCEECCCCCTTSTTBTTBCTTCEEEEETTBCCCCHHHHHHHHHH
T ss_pred CCcEEEEEECCCChHHhCCCCCCEEEEECCEECCCHHHHHHHHHh
Confidence 579999999999999999999999999999999999999998853
No 5
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.15 E-value=1.6e-06 Score=69.84 Aligned_cols=43 Identities=23% Similarity=0.378 Sum_probs=40.2
Q ss_pred CceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCC--hhhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHN--EQDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~--~~dW~~cL~ 55 (417)
.|++|..|.++|||+. ||++||+|++|||.+|.+ .+++.+.|.
T Consensus 33 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~ 78 (98)
T 2jxo_A 33 PGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIR 78 (98)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3999999999999998 899999999999999999 888888884
No 6
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.13 E-value=9.9e-07 Score=70.21 Aligned_cols=52 Identities=17% Similarity=0.183 Sum_probs=43.7
Q ss_pred cccceeeCC--ceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChhhHHHHHHh
Q 042181 5 LFPFYKQCE--GTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQDWMEVAAL 56 (417)
Q Consensus 5 LsP~Y~~g~--Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~dW~~cL~~ 56 (417)
+.|.+..+. |+.|..+.|+|||+. ||++||+|++|||.+|.+.+|+.+.+..
T Consensus 9 ~~p~~~~g~~~G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~~~d~~~~~~~ 63 (87)
T 2i6v_A 9 LSQVKRDDKVLGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQS 63 (87)
T ss_dssp EEEEEETTEEEEEEEEECSCHHHHHHTTCCTTCEEEEETTEETTCHHHHHHHHHT
T ss_pred eEEEeeCCeEEEEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCCHHHHHHHHHh
Confidence 345555443 888999999998888 9999999999999999999999888853
No 7
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.13 E-value=2.9e-06 Score=73.10 Aligned_cols=45 Identities=29% Similarity=0.332 Sum_probs=42.1
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCeEEeeCCeecCChhhHHHHHHh
Q 042181 12 CEGTMVLDVPSTSPLSGYLSPGDVIVSLDGIHIHNEQDWMEVAAL 56 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~ggL~~GDvI~sINgc~V~~~~dW~~cL~~ 56 (417)
..|++|.+|.++|||+.||++||+|++|||.+|.+.+++.+.+..
T Consensus 56 ~~g~~V~~V~~~spA~aGL~~GD~I~~inG~~v~~~~~l~~~l~~ 100 (134)
T 2l97_A 56 TSGVIVRSVQSNMPANGHLEKYDVITKVDDKEIASSTDLQSALYN 100 (134)
T ss_dssp CSCEEEEECSTTSGGGTTSCSSCEEEEETTEECCCHHHHHHHHHH
T ss_pred CCCEEEEEECCCCchHHCCCCCCEEEEECCEEcCCHHHHHHHHHh
Confidence 579999999999999988999999999999999999999998853
No 8
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.11 E-value=1.4e-06 Score=69.19 Aligned_cols=43 Identities=23% Similarity=0.219 Sum_probs=39.8
Q ss_pred CceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChh--hHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQ--DWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~--dW~~cL~ 55 (417)
.|++|..|.++|||+. ||++||+|++|||.+|.+.+ ++.+.+.
T Consensus 27 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~ 72 (91)
T 2pkt_A 27 QPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIK 72 (91)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 5899999999999997 89999999999999999988 8888774
No 9
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.10 E-value=1.9e-06 Score=68.30 Aligned_cols=43 Identities=16% Similarity=0.282 Sum_probs=39.6
Q ss_pred CceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCCh--hhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNE--QDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~--~dW~~cL~ 55 (417)
.|++|..|.++|||+. ||++||+|++|||.+|.+. +++.+.|.
T Consensus 28 ~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~ 73 (90)
T 2he4_A 28 PGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIK 73 (90)
T ss_dssp SSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCHHHHHHHHT
T ss_pred CCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 5899999999999998 8999999999999999998 78887773
No 10
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.10 E-value=1.8e-06 Score=68.06 Aligned_cols=43 Identities=23% Similarity=0.332 Sum_probs=40.0
Q ss_pred CceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCC--hhhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHN--EQDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~--~~dW~~cL~ 55 (417)
.|++|..|.++|||+. ||++||+|++|||.+|.+ .+++.+.+.
T Consensus 26 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~ 71 (87)
T 2pa1_A 26 TPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQSKIR 71 (87)
T ss_dssp EEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCHHHHHHHHH
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4899999999999998 899999999999999999 788888885
No 11
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.09 E-value=2.2e-06 Score=70.86 Aligned_cols=44 Identities=30% Similarity=0.432 Sum_probs=41.6
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~dW~~cL~ 55 (417)
..|++|.+|.++|||+. ||++||+|++|||.+|.+.+++.+.+.
T Consensus 34 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~ 78 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVYEAVR 78 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHH
T ss_pred CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCHHHHHHHHh
Confidence 68999999999999998 999999999999999999999988884
No 12
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.07 E-value=5.1e-06 Score=66.42 Aligned_cols=37 Identities=32% Similarity=0.510 Sum_probs=34.6
Q ss_pred eCCceEEEEeCCCCCCCCCCCCCCeEEeeCCeecCCh
Q 042181 11 QCEGTMVLDVPSTSPLSGYLSPGDVIVSLDGIHIHNE 47 (417)
Q Consensus 11 ~g~Gv~V~~V~~~SPl~ggL~~GDvI~sINgc~V~~~ 47 (417)
.+.|++|..|.++|||+++|++||+|++|||.+|.+.
T Consensus 33 ~~~gv~V~~V~~~spA~~gL~~GD~I~~vng~~v~~~ 69 (95)
T 1mfg_A 33 DDDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINI 69 (95)
T ss_dssp TCCCEEEEEECTTSTTTTTCCTTCEEEEETTEECTTC
T ss_pred CCCCEEEEEECCCCchhhCCCCCCEEEEECCEEcCCC
Confidence 3679999999999999999999999999999999884
No 13
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.04 E-value=3e-06 Score=68.58 Aligned_cols=43 Identities=30% Similarity=0.529 Sum_probs=38.7
Q ss_pred CceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL~ 55 (417)
.|++|..|.++|||+. | |++||+|++|||.+|.+ .+++.+.|.
T Consensus 39 ~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~ 85 (103)
T 2fcf_A 39 RGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIR 85 (103)
T ss_dssp --EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 6999999999999998 8 99999999999999998 888888884
No 14
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.04 E-value=2.8e-06 Score=68.89 Aligned_cols=44 Identities=20% Similarity=0.258 Sum_probs=38.7
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChhhHHHHHHh
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQDWMEVAAL 56 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~dW~~cL~~ 56 (417)
+.|++|..|.++|||+. ||++||+|++|||.+|.+.+ |.+.+..
T Consensus 35 ~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~-~~~~~~~ 79 (100)
T 2eeh_A 35 GLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTT-MGSAVKV 79 (100)
T ss_dssp TCCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCC-HHHHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HHHHHHh
Confidence 46999999999999998 89999999999999999975 5555543
No 15
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=98.04 E-value=2.5e-06 Score=68.42 Aligned_cols=43 Identities=16% Similarity=0.326 Sum_probs=39.4
Q ss_pred CceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCC--hhhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHN--EQDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~--~~dW~~cL~ 55 (417)
.|++|.+|.++|||+. ||++||+|++|||.+|.+ .+++.+.+.
T Consensus 30 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~ 75 (96)
T 2v90_A 30 PGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQ 75 (96)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3899999999999998 899999999999999999 688888774
No 16
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.02 E-value=6.2e-06 Score=66.07 Aligned_cols=44 Identities=23% Similarity=0.279 Sum_probs=38.4
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChhhHHHHHHh
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQDWMEVAAL 56 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~dW~~cL~~ 56 (417)
+.|++|..|.++|||+. ||++||+|++|||.+|.+.++. +.+..
T Consensus 28 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~-~~~~~ 72 (93)
T 2dls_A 28 DRIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHL-EVVKL 72 (93)
T ss_dssp SSSCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCHH-HHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH-HHHHh
Confidence 67999999999999998 8999999999999999997554 55543
No 17
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.02 E-value=6.3e-06 Score=66.84 Aligned_cols=44 Identities=20% Similarity=0.388 Sum_probs=38.9
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCCh--hhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNE--QDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~--~dW~~cL~ 55 (417)
..|++|..|.++|||+. ||++||+|++|||.+|.+. ++..+.+.
T Consensus 29 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~ 75 (102)
T 2d90_A 29 QKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIR 75 (102)
T ss_dssp SSSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 46999999999999999 8999999999999999984 56666664
No 18
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.02 E-value=3.6e-06 Score=69.56 Aligned_cols=44 Identities=25% Similarity=0.428 Sum_probs=41.2
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~dW~~cL~ 55 (417)
..|++|..|.++|||+. ||++||+|++|||.+|.+.+++.+.+.
T Consensus 34 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~ 78 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVDSSELQEAVL 78 (112)
T ss_dssp CSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHH
T ss_pred CCCeEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHHHHHHh
Confidence 68999999999999997 999999999999999999999988883
No 19
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=98.02 E-value=1.8e-06 Score=68.74 Aligned_cols=44 Identities=18% Similarity=0.335 Sum_probs=39.1
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecC--ChhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIH--NEQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~--~~~dW~~cL~ 55 (417)
..|++|..|.++|||+. ||++||+|++|||.+|. +.+++.+.|.
T Consensus 26 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~ 72 (91)
T 2vsp_A 26 LPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQ 72 (91)
T ss_dssp CSCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHT
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 36899999999999998 89999999999999999 8888888874
No 20
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.01 E-value=2.8e-06 Score=67.68 Aligned_cols=43 Identities=21% Similarity=0.390 Sum_probs=40.0
Q ss_pred ceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCCh--hhHHHHHHh
Q 042181 14 GTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNE--QDWMEVAAL 56 (417)
Q Consensus 14 Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~--~dW~~cL~~ 56 (417)
|++|..|.++|||+. ||++||+|++|||.+|.+. +++.+.|..
T Consensus 30 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~ 75 (95)
T 3r68_A 30 GQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRK 75 (95)
T ss_dssp SEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCHHHHHHHHHT
T ss_pred CEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 999999999999999 9999999999999999998 888888853
No 21
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.00 E-value=4.2e-06 Score=64.17 Aligned_cols=43 Identities=16% Similarity=0.250 Sum_probs=39.6
Q ss_pred CceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecC--ChhhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIH--NEQDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~--~~~dW~~cL~ 55 (417)
.|++|..|.++|||+. + |++||+|++|||.+|. +.++..+.+.
T Consensus 21 ~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~ 67 (81)
T 2rcz_A 21 SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIE 67 (81)
T ss_dssp EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 6899999999999987 8 9999999999999999 8888887774
No 22
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.00 E-value=3.5e-06 Score=68.37 Aligned_cols=43 Identities=21% Similarity=0.195 Sum_probs=38.2
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChh--hHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQ--DWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~--dW~~cL 54 (417)
..|++|..|.++|||+. ||++||+|++|||.+|.+.+ ++.+.+
T Consensus 44 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l 89 (104)
T 3sfj_A 44 DKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRL 89 (104)
T ss_dssp CCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 78999999999999998 99999999999999998765 555555
No 23
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.00 E-value=3.9e-06 Score=67.26 Aligned_cols=45 Identities=22% Similarity=0.417 Sum_probs=41.0
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHHHh
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVAAL 56 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL~~ 56 (417)
..|++|..|.++|||+. | |++||+|++|||.+|.+ .+++.+.+..
T Consensus 31 ~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 79 (97)
T 2jil_A 31 SRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ 79 (97)
T ss_dssp CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 45899999999999998 8 99999999999999999 8888888853
No 24
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=97.99 E-value=5e-06 Score=65.86 Aligned_cols=43 Identities=23% Similarity=0.292 Sum_probs=37.6
Q ss_pred CceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCC--hhhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHN--EQDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~--~~dW~~cL~ 55 (417)
.|++|..|.++|||+. ||++||+|++|||.+|.+ .++..+.+.
T Consensus 27 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~ 72 (91)
T 1g9o_A 27 LGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIR 72 (91)
T ss_dssp SSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 5999999999999998 899999999999999998 455555553
No 25
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.99 E-value=3.5e-06 Score=71.17 Aligned_cols=43 Identities=19% Similarity=0.399 Sum_probs=40.4
Q ss_pred CceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCChhhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNEQDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~~dW~~cL~ 55 (417)
.|++|..|.++|||+. | |++||+|++|||.+|.+.+++.+.|.
T Consensus 48 ~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~l~ 92 (124)
T 1wh1_A 48 IGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREEAVALLT 92 (124)
T ss_dssp CCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCSHHHHHHHHT
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCHHHHHHHHH
Confidence 7999999999999998 8 99999999999999999888888884
No 26
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=97.99 E-value=7.2e-06 Score=70.42 Aligned_cols=50 Identities=28% Similarity=0.335 Sum_probs=42.2
Q ss_pred ccceeeCCceEEEEeCCCCCCCCCCCCCCeEEeeCCeecCChhhHHHHHH
Q 042181 6 FPFYKQCEGTMVLDVPSTSPLSGYLSPGDVIVSLDGIHIHNEQDWMEVAA 55 (417)
Q Consensus 6 sP~Y~~g~Gv~V~~V~~~SPl~ggL~~GDvI~sINgc~V~~~~dW~~cL~ 55 (417)
.+......|++|.+|.++|||+..|++||+|++|||.+|.+.+++.+.+.
T Consensus 18 ~~~~~~~~gv~V~~V~~~spA~~aL~~GD~Il~InG~~v~~~~dl~~~l~ 67 (125)
T 2hga_A 18 YFQGHQPDGVQIDSVVPGSPASKVLTPGLVIESINGMPTSNLTTYSAALK 67 (125)
T ss_dssp -----CCCCEEEEEECSSSGGGGTSCTTCEEEEETTEECSSHHHHHHHHT
T ss_pred ccccCCCCceEEEEECCCChHHHhcCCCCEEEEECCEEcCCHHHHHHHHH
Confidence 33444578999999999999987899999999999999999999999884
No 27
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=97.99 E-value=7.4e-06 Score=66.85 Aligned_cols=43 Identities=21% Similarity=0.360 Sum_probs=38.7
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCeEEeeCCeecCChhhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSGYLSPGDVIVSLDGIHIHNEQDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~ggL~~GDvI~sINgc~V~~~~dW~~cL 54 (417)
..|++|..|.++|||+++|++||+|++|||.+|.+.++....+
T Consensus 38 ~~gv~V~~V~~~spA~agl~~GD~I~~vng~~v~~~~~~~~~~ 80 (107)
T 2h2b_A 38 ETSIVISDVLKGGPAEGQLQENDRVAMVNGVSMDNVEHAFAVQ 80 (107)
T ss_dssp CCCEEEEEECTTSTTBTTBCTTCEEEEETTEECTTCCHHHHHH
T ss_pred CCCEEEEEECCCCchhhCCCCCCEEEEECCEECCCccHHHHHH
Confidence 4699999999999999889999999999999999987766555
No 28
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=97.98 E-value=4.4e-06 Score=67.23 Aligned_cols=45 Identities=27% Similarity=0.439 Sum_probs=40.3
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCC--hhhHHHHHHh
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHN--EQDWMEVAAL 56 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~--~~dW~~cL~~ 56 (417)
..|++|..|.++|||+. ||++||+|++|||.+|.+ .+++.+.|..
T Consensus 36 ~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~ 83 (96)
T 2ego_A 36 EMVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDIIKA 83 (96)
T ss_dssp CEEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 35899999999999998 899999999999999999 5888888753
No 29
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.98 E-value=2.6e-06 Score=68.28 Aligned_cols=44 Identities=23% Similarity=0.317 Sum_probs=40.0
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCCh--hhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNE--QDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~--~dW~~cL~ 55 (417)
..|++|..|.++|||+. ||++||+|++|||.+|.+. +++.+.+.
T Consensus 29 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~ 75 (94)
T 1vb7_A 29 HTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQSKIR 75 (94)
T ss_dssp TEEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 35899999999999998 8999999999999999997 88887774
No 30
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=97.97 E-value=5.2e-06 Score=65.61 Aligned_cols=43 Identities=16% Similarity=0.250 Sum_probs=39.9
Q ss_pred CceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecC--ChhhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIH--NEQDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~--~~~dW~~cL~ 55 (417)
.|++|..|.++|||+. | |++||+|++|||.+|. +.+++.+.+.
T Consensus 23 ~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~ 69 (92)
T 3cyy_A 23 SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIE 69 (92)
T ss_dssp EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 6999999999999997 8 9999999999999999 8888888774
No 31
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=97.97 E-value=6.1e-06 Score=68.49 Aligned_cols=44 Identities=20% Similarity=0.433 Sum_probs=39.1
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCCh--hhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNE--QDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~--~dW~~cL~ 55 (417)
..|++|..|.++|||+. ||++||+|++|||.+|.+. +++.+.+.
T Consensus 37 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~ 83 (114)
T 2edz_A 37 TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVR 83 (114)
T ss_dssp CCSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHHHHHHHHH
T ss_pred CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 47999999999999999 8999999999999999984 66766663
No 32
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=97.97 E-value=3.8e-06 Score=67.16 Aligned_cols=41 Identities=17% Similarity=0.385 Sum_probs=37.4
Q ss_pred eCCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChhhHH
Q 042181 11 QCEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQDWM 51 (417)
Q Consensus 11 ~g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~dW~ 51 (417)
.+.|++|..|.++|||+. ||++||+|++|||.+|.+.++..
T Consensus 32 ~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~ 73 (97)
T 2w4f_A 32 DDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHE 73 (97)
T ss_dssp TBCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH
T ss_pred CCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCHHH
Confidence 368999999999999998 89999999999999999977654
No 33
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=97.96 E-value=4.8e-06 Score=65.01 Aligned_cols=43 Identities=21% Similarity=0.269 Sum_probs=38.9
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCCh--hhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNE--QDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~--~dW~~cL 54 (417)
+.|++|..|.++|||+. ||++||+|++|||.+|.+. ++..+.+
T Consensus 22 ~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l 67 (83)
T 2kv8_A 22 QAPCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHEDVVKLI 67 (83)
T ss_dssp SSSCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHHHHHHHH
T ss_pred CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 66899999999999998 8999999999999999987 6666666
No 34
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=97.96 E-value=3.5e-06 Score=68.67 Aligned_cols=44 Identities=20% Similarity=0.447 Sum_probs=39.3
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChh--hHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQ--DWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~--dW~~cL~ 55 (417)
..|++|..|.++|||+. ||++||+|++|||.+|.+.+ ++.+.+.
T Consensus 25 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~ 71 (106)
T 3ngh_A 25 TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVR 71 (106)
T ss_dssp CCSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45899999999999988 89999999999999999876 7777774
No 35
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=97.94 E-value=4.8e-06 Score=65.56 Aligned_cols=44 Identities=16% Similarity=0.195 Sum_probs=38.4
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCCh--hhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNE--QDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~--~dW~~cL~ 55 (417)
+.|++|..|.++|||+. ||++||+|++|||.+|.+. ++..+.+.
T Consensus 26 ~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~ 72 (88)
T 2uzc_A 26 NMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLEAQNKIK 72 (88)
T ss_dssp TEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45899999999999998 8999999999999999987 56665553
No 36
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=97.94 E-value=7.6e-06 Score=66.49 Aligned_cols=44 Identities=27% Similarity=0.419 Sum_probs=37.7
Q ss_pred eCCceEEEEeCCCCCCCCCCCCCCeEEeeCCeecCCh--hhHHHHH
Q 042181 11 QCEGTMVLDVPSTSPLSGYLSPGDVIVSLDGIHIHNE--QDWMEVA 54 (417)
Q Consensus 11 ~g~Gv~V~~V~~~SPl~ggL~~GDvI~sINgc~V~~~--~dW~~cL 54 (417)
.+.|++|..|.++|||+++|++||+|++|||.+|.+. ++....+
T Consensus 41 ~~~gv~V~~V~~~spA~~gL~~GD~I~~vng~~v~~~~~~~~~~~~ 86 (103)
T 1n7t_A 41 DDDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQAVSLL 86 (103)
T ss_dssp SCCSEECCCBSSSSTTSSSCCTTCEEEEETTEECSSCCHHHHHHHH
T ss_pred CCCCEEEEEECCCCchHHCCCCCCEEEEECCEECCCCCHHHHHHHh
Confidence 4679999999999999999999999999999999874 3444444
No 37
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=97.93 E-value=6e-06 Score=66.52 Aligned_cols=42 Identities=26% Similarity=0.352 Sum_probs=38.5
Q ss_pred ceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecC--ChhhHHHHHH
Q 042181 14 GTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIH--NEQDWMEVAA 55 (417)
Q Consensus 14 Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~--~~~dW~~cL~ 55 (417)
|++|..|.++|||+. ||++||+|++|||.+|. +.++..+.+.
T Consensus 35 g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~ 79 (99)
T 3khf_A 35 HHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMDVVELLL 79 (99)
T ss_dssp EEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 889999999999998 89999999999999999 6777777774
No 38
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=97.93 E-value=1.3e-05 Score=63.27 Aligned_cols=42 Identities=24% Similarity=0.355 Sum_probs=34.5
Q ss_pred CceEEEEeCCCCCCCCCCCCCCeEEeeCCeecCCh--hhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSGYLSPGDVIVSLDGIHIHNE--QDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~ggL~~GDvI~sINgc~V~~~--~dW~~cL~ 55 (417)
.|++|..| ++|||+++|++||+|++|||.+|.+. ++..+.+.
T Consensus 27 ~~~~v~~v-~~spA~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~ 70 (88)
T 3bpu_A 27 GGQRVKQI-VDSPRSRGLKEGDLIVEVNKKNVQALTHNQVVDMLV 70 (88)
T ss_dssp SSEEEEEC-CC--CCTTCCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred CcEEEEEe-cCChhHhCCCCCCEEEEECCEEcCCCCHHHHHHHHH
Confidence 58888887 99999989999999999999999986 66666663
No 39
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.93 E-value=6.9e-06 Score=67.10 Aligned_cols=45 Identities=16% Similarity=0.258 Sum_probs=40.4
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCC--hhhHHHHHHh
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHN--EQDWMEVAAL 56 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~--~~dW~~cL~~ 56 (417)
+.|++|..|.++|||+. ||++||+|++|||.+|.+ .++..+.|..
T Consensus 40 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~ 87 (104)
T 1wi2_A 40 QLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEILKT 87 (104)
T ss_dssp CCCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred CCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC
Confidence 36899999999999997 999999999999999999 7777777753
No 40
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=97.92 E-value=8.4e-06 Score=64.40 Aligned_cols=45 Identities=18% Similarity=0.206 Sum_probs=38.3
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecC--ChhhHHHHHHh
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIH--NEQDWMEVAAL 56 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~--~~~dW~~cL~~ 56 (417)
+.|++|..|.++|||+. | |++||+|++|||.+|. +.++..+.+..
T Consensus 26 ~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 74 (90)
T 2q9v_A 26 GEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQ 74 (90)
T ss_dssp TSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHH
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 36899999999999998 8 9999999999999995 46666666643
No 41
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.92 E-value=6e-06 Score=67.34 Aligned_cols=43 Identities=23% Similarity=0.408 Sum_probs=39.8
Q ss_pred CceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCC--hhhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHN--EQDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~--~~dW~~cL~ 55 (417)
.|++|..|.++|||+. +|++||+|++|||.+|.+ .+++.+.|.
T Consensus 29 ~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~ 74 (103)
T 1v5l_A 29 QPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIK 74 (103)
T ss_dssp EEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHHHHHHT
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4899999999999997 999999999999999999 888888884
No 42
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=97.92 E-value=5.4e-06 Score=70.63 Aligned_cols=44 Identities=23% Similarity=0.280 Sum_probs=40.7
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCCh--hhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNE--QDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~--~dW~~cL~ 55 (417)
+.|++|..|.++|||+. ||++||+|++|||.+|.+. +++.+.|.
T Consensus 50 ~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~ 96 (124)
T 3tsv_A 50 DVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLL 96 (124)
T ss_dssp TSCEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 46999999999999997 8999999999999999998 88888885
No 43
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=97.90 E-value=8.3e-06 Score=69.37 Aligned_cols=45 Identities=29% Similarity=0.483 Sum_probs=40.8
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHHHh
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVAAL 56 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL~~ 56 (417)
..|++|..|.++|||+. | |++||+|++|||.+|.+ .++..+.|..
T Consensus 58 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 106 (123)
T 2iwq_A 58 MRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRK 106 (123)
T ss_dssp CCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 46999999999999998 8 99999999999999998 8888888753
No 44
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=97.90 E-value=7.1e-06 Score=65.83 Aligned_cols=43 Identities=28% Similarity=0.422 Sum_probs=39.2
Q ss_pred CceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCCh--hhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNE--QDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~--~dW~~cL~ 55 (417)
.|++|..|.++|||+. | |++||+|++|||.+|.+. +++.+.+.
T Consensus 37 ~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~ 83 (98)
T 1ihj_A 37 TGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIK 83 (98)
T ss_dssp EEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 4899999999999998 8 999999999999999996 77777774
No 45
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=97.89 E-value=9.2e-06 Score=63.53 Aligned_cols=44 Identities=18% Similarity=0.191 Sum_probs=38.4
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL~ 55 (417)
..|++|..|.++|||+. | |++||+|++|||.+|.+ .++..+.+.
T Consensus 24 ~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~ 71 (85)
T 2i04_A 24 DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQ 71 (85)
T ss_dssp TBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 35699999999999988 8 99999999999999994 577777774
No 46
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=97.89 E-value=8.5e-06 Score=66.96 Aligned_cols=43 Identities=12% Similarity=0.135 Sum_probs=39.3
Q ss_pred CceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCCh--hhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNE--QDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~--~dW~~cL~ 55 (417)
.|++|..|.++|||+. ||++||+|++|||.+|.+. ++..+.+.
T Consensus 45 ~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~ 90 (109)
T 1q3o_A 45 ALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIR 90 (109)
T ss_dssp SSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4899999999999998 8999999999999999998 77777774
No 47
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=97.88 E-value=8.7e-06 Score=70.72 Aligned_cols=43 Identities=21% Similarity=0.220 Sum_probs=39.3
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCC--hhhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHN--EQDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~--~~dW~~cL 54 (417)
..|++|.+|.++|||+. ||++||+|++|||.+|.+ .++..+.|
T Consensus 63 ~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l 108 (139)
T 2vz5_A 63 DKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRL 108 (139)
T ss_dssp CCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Confidence 57999999999999998 999999999999999994 67777777
No 48
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=97.88 E-value=6.1e-06 Score=64.40 Aligned_cols=43 Identities=19% Similarity=0.258 Sum_probs=36.5
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCCh--hhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNE--QDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~--~dW~~cL 54 (417)
+.|++|..|.++|||+. +|++||+|++|||.+|.+. ++..+.+
T Consensus 24 ~~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~ 69 (85)
T 1rgw_A 24 NMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKI 69 (85)
T ss_dssp TSCCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHHHHHHHH
T ss_pred CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHH
Confidence 35899999999999987 8999999999999999987 4444444
No 49
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=97.87 E-value=7.8e-06 Score=67.39 Aligned_cols=44 Identities=16% Similarity=0.228 Sum_probs=40.3
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL~ 55 (417)
+.|++|..|.++|||+. | |++||+|++|||.+|.+ .+++.+.+.
T Consensus 35 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~ 82 (97)
T 2ejy_A 35 KQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMK 82 (97)
T ss_dssp TCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHH
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 46999999999999998 8 99999999999999996 788888875
No 50
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.86 E-value=1.7e-05 Score=64.71 Aligned_cols=45 Identities=20% Similarity=0.290 Sum_probs=39.1
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHHHh
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVAAL 56 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL~~ 56 (417)
+.|++|..|.++|||+. | |++||+|++|||.+|.+ .++..+.|..
T Consensus 33 ~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~ 81 (103)
T 1uep_A 33 GQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHH 81 (103)
T ss_dssp TSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHH
T ss_pred CCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 46899999999999998 7 99999999999999976 6677766643
No 51
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.86 E-value=8.5e-06 Score=66.54 Aligned_cols=43 Identities=16% Similarity=0.314 Sum_probs=37.7
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL 54 (417)
+.|++|..|.++|||+. | |++||+|++|||.+|.+ .++..+.+
T Consensus 37 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l 83 (105)
T 1wha_A 37 DAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLL 83 (105)
T ss_dssp CCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHH
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 57999999999999988 8 99999999999999998 55555555
No 52
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.85 E-value=8.2e-06 Score=66.05 Aligned_cols=44 Identities=20% Similarity=0.129 Sum_probs=38.8
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChhhHHHHHHh
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQDWMEVAAL 56 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~dW~~cL~~ 56 (417)
+.|++|..|.++|||+. +|++||+|++|||.+|.+.++ .+.+..
T Consensus 34 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~-~~~~~~ 78 (101)
T 1uez_A 34 GVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTH-AEAVKA 78 (101)
T ss_dssp TCCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCH-HHHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCH-HHHHHh
Confidence 46999999999999998 899999999999999999877 555543
No 53
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.85 E-value=1.2e-05 Score=64.41 Aligned_cols=44 Identities=14% Similarity=0.213 Sum_probs=39.8
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeec-CChhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHI-HNEQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V-~~~~dW~~cL~ 55 (417)
+.|++|..|.++|||+. + |++||+|++|||.+| .+.+++.+.|.
T Consensus 28 ~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v~~~~~~~~~~l~ 74 (91)
T 2e7k_A 28 GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPVGSDPRALQELLR 74 (91)
T ss_dssp SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCHHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCHHHHHHHHH
Confidence 57999999999999997 5 999999999999999 77888888774
No 54
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=97.85 E-value=1.2e-05 Score=64.13 Aligned_cols=44 Identities=16% Similarity=0.085 Sum_probs=38.2
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCC--hhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHN--EQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~--~~dW~~cL~ 55 (417)
+.|++|..|.++|||+. ||++||+|++|||.+|.+ .++..+.+.
T Consensus 23 ~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~ 69 (91)
T 2f5y_A 23 DSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIR 69 (91)
T ss_dssp SSSCEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 67899999999999998 999999999999999996 456665553
No 55
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=97.85 E-value=9.7e-06 Score=64.04 Aligned_cols=43 Identities=12% Similarity=0.069 Sum_probs=36.4
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCCh--hhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNE--QDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~--~dW~~cL 54 (417)
+.|++|..|.++|||+. ||++||+|++|||.+|.+. ++..+.+
T Consensus 26 ~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~ 71 (89)
T 2q3g_A 26 NVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIEAQNKI 71 (89)
T ss_dssp TEEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 46899999999999998 8999999999999999964 4444444
No 56
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.84 E-value=6.8e-06 Score=66.45 Aligned_cols=44 Identities=20% Similarity=0.358 Sum_probs=37.6
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCeEEeeCCeecCChhhHHHHHHh
Q 042181 12 CEGTMVLDVPSTSPLSGYLSPGDVIVSLDGIHIHNEQDWMEVAAL 56 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~ggL~~GDvI~sINgc~V~~~~dW~~cL~~ 56 (417)
..|++|..|.++|||+++|++||+|++|||.+|.+. +|.+++..
T Consensus 30 ~~~~~V~~V~~~spA~agL~~GD~Il~ing~~v~~~-~~~~~~~~ 73 (96)
T 2edv_A 30 SLPLTVVAVTAGGSAHGKLFPGDQILQMNNEPAEDL-SWERAVDI 73 (96)
T ss_dssp SSSCBCCCBCSSSSSTTTSCTTCBEEEESSCBSTTC-CHHHHHHH
T ss_pred CCCeEEEEECCCCchhhCCCCCCEEEEECCEECCCC-CHHHHHHH
Confidence 568999999999999889999999999999999875 45555543
No 57
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.83 E-value=8.3e-06 Score=67.02 Aligned_cols=40 Identities=18% Similarity=0.411 Sum_probs=36.2
Q ss_pred eCCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChhhH
Q 042181 11 QCEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQDW 50 (417)
Q Consensus 11 ~g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~dW 50 (417)
...|++|..|.++|||+. ||++||+|++|||.+|.+.++.
T Consensus 44 ~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~ 84 (110)
T 1x5q_A 44 DDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHH 84 (110)
T ss_dssp TCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHH
T ss_pred CCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHH
Confidence 368999999999999998 8999999999999999986543
No 58
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=97.83 E-value=2.3e-05 Score=63.82 Aligned_cols=43 Identities=14% Similarity=0.206 Sum_probs=38.9
Q ss_pred ceEEEEeCCCCCCCC--CCCCCCeEEeeCCeec--CChhhHHHHHHh
Q 042181 14 GTMVLDVPSTSPLSG--YLSPGDVIVSLDGIHI--HNEQDWMEVAAL 56 (417)
Q Consensus 14 Gv~V~~V~~~SPl~g--gL~~GDvI~sINgc~V--~~~~dW~~cL~~ 56 (417)
|++|..|.++|||+. +|++||+|++|||.+| .+.++..+.|..
T Consensus 38 ~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~ 84 (101)
T 2yt7_A 38 TAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRE 84 (101)
T ss_dssp CEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHH
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 699999999999996 6999999999999999 778888888854
No 59
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=97.82 E-value=9.4e-06 Score=64.25 Aligned_cols=43 Identities=16% Similarity=0.161 Sum_probs=36.3
Q ss_pred CCceEEEEeCCCCCCC--CCCCCCCeEEeeCCeecCChhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLS--GYLSPGDVIVSLDGIHIHNEQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~--ggL~~GDvI~sINgc~V~~~~dW~~cL~ 55 (417)
+.|++|..|.++|||+ |+|++||+|++|||.+|.+. +|.+.+.
T Consensus 29 ~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~-~~~~~~~ 73 (90)
T 1qav_A 29 KMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSA-THDEAVQ 73 (90)
T ss_dssp TEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTC-CHHHHHH
T ss_pred CCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCC-CHHHHHH
Confidence 3689999999999999 48999999999999999875 3444443
No 60
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=97.82 E-value=1.4e-05 Score=67.15 Aligned_cols=43 Identities=23% Similarity=0.378 Sum_probs=40.2
Q ss_pred CceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCC--hhhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHN--EQDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~--~~dW~~cL~ 55 (417)
.|++|..|.++|||+. ||++||+|++|||.+|.+ .+++.+.|.
T Consensus 33 ~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~ 78 (128)
T 2kjd_A 33 PGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIR 78 (128)
T ss_dssp CSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4899999999999998 899999999999999999 888888884
No 61
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=97.82 E-value=1.3e-05 Score=64.88 Aligned_cols=43 Identities=9% Similarity=0.179 Sum_probs=37.0
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL 54 (417)
+.|++|..|.++|||+. | |++||+|++|||.+|.+ .++..+.+
T Consensus 33 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~ 79 (102)
T 2i1n_A 33 DPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEAL 79 (102)
T ss_dssp CCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 56999999999999997 8 99999999999999987 44444444
No 62
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=97.81 E-value=1.6e-05 Score=63.14 Aligned_cols=43 Identities=7% Similarity=0.156 Sum_probs=36.9
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCCh--hhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNE--QDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~--~dW~~cL 54 (417)
+.|++|..|.++|||+. | |++||+|++|||.+|.+. ++..+.+
T Consensus 32 ~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~ 78 (94)
T 2fe5_A 32 DNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASL 78 (94)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHH
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 46999999999999987 7 999999999999999884 4455444
No 63
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=97.81 E-value=9.7e-06 Score=66.08 Aligned_cols=45 Identities=18% Similarity=0.299 Sum_probs=40.7
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecC--ChhhHHHHHHh
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIH--NEQDWMEVAAL 56 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~--~~~dW~~cL~~ 56 (417)
..|++|..|.++|||+. ||++||+|++|||.+|. +.++..+.|..
T Consensus 47 ~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~ 94 (104)
T 2z17_A 47 EMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIRS 94 (104)
T ss_dssp SCCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCHHHHHHHHHH
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHHh
Confidence 36999999999999998 89999999999999999 77888888753
No 64
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=97.81 E-value=1.2e-05 Score=65.72 Aligned_cols=44 Identities=23% Similarity=0.354 Sum_probs=38.6
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL~ 55 (417)
+.|++|..|.++|||+. | |++||+|++|||.+|.+ .++..+.+.
T Consensus 43 ~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~ 90 (108)
T 2jre_A 43 ATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLR 90 (108)
T ss_dssp CCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHH
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45999999999999987 8 99999999999999998 566666664
No 65
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=97.80 E-value=9.2e-06 Score=64.30 Aligned_cols=37 Identities=16% Similarity=0.251 Sum_probs=34.2
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChh
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQ 48 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~ 48 (417)
..|++|..|.++|||+. ||++||+|++|||.+|.+.+
T Consensus 31 ~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~ 68 (91)
T 1m5z_A 31 EKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFD 68 (91)
T ss_dssp SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC
Confidence 36999999999999997 99999999999999999854
No 66
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=97.80 E-value=1.2e-05 Score=65.43 Aligned_cols=42 Identities=17% Similarity=0.196 Sum_probs=38.7
Q ss_pred eEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChhhHHHHHHh
Q 042181 15 TMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQDWMEVAAL 56 (417)
Q Consensus 15 v~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~dW~~cL~~ 56 (417)
.+|.+|.++|||+. ||++||+|++|||.+|.+.+|+.+.|..
T Consensus 4 p~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~d~~~~l~~ 46 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQLVD 46 (95)
T ss_dssp CBEEEECTTSHHHHTTCCTTCEEEEETTEECSSHHHHHHHHHH
T ss_pred CEEEeeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHH
Confidence 36899999999998 9999999999999999999999998853
No 67
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.79 E-value=1.1e-05 Score=68.43 Aligned_cols=44 Identities=20% Similarity=0.355 Sum_probs=41.3
Q ss_pred CCceEEEEeCC--CCCCCC-CCCCCCeEEeeCCeecCCh--hhHHHHHH
Q 042181 12 CEGTMVLDVPS--TSPLSG-YLSPGDVIVSLDGIHIHNE--QDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~--~SPl~g-gL~~GDvI~sINgc~V~~~--~dW~~cL~ 55 (417)
+.|++|..|.+ +|||+. ||++||+|++|||.+|.+. +++.+.|.
T Consensus 43 ~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~dl~~~l~ 91 (118)
T 2yub_A 43 ATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAIK 91 (118)
T ss_dssp CCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHHHHHHHH
T ss_pred CCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHH
Confidence 47999999999 999998 8999999999999999998 99999885
No 68
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.78 E-value=1.1e-05 Score=67.22 Aligned_cols=43 Identities=21% Similarity=0.237 Sum_probs=39.1
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChhhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~dW~~cL 54 (417)
+.|++|..|.++|||+. ||++||+|++|||.+|.+.++....+
T Consensus 41 ~~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~~~~ 84 (117)
T 1uit_A 41 KGGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQQARL 84 (117)
T ss_dssp TSCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCHHHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 47999999999999998 99999999999999999987776655
No 69
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=97.77 E-value=1.7e-05 Score=63.39 Aligned_cols=43 Identities=16% Similarity=0.305 Sum_probs=36.7
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCCh--hhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNE--QDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~--~dW~~cL 54 (417)
+.|++|..|.++|||+. | |++||+|++|||.+|.+. ++..+.+
T Consensus 32 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l 78 (96)
T 1d5g_A 32 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETL 78 (96)
T ss_dssp SSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 36999999999999987 8 999999999999999954 5555555
No 70
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=97.77 E-value=1.9e-05 Score=65.30 Aligned_cols=45 Identities=16% Similarity=0.332 Sum_probs=39.5
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHHHh
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVAAL 56 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL~~ 56 (417)
..|++|..|.++|||+. | |++||+|++|||.+|.+ .++..+.|..
T Consensus 32 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 80 (108)
T 3cbz_A 32 DGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRD 80 (108)
T ss_dssp CCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHH
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 47899999999999997 8 99999999999999999 6666666643
No 71
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=97.77 E-value=1.7e-05 Score=62.85 Aligned_cols=43 Identities=21% Similarity=0.280 Sum_probs=36.4
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCCh--hhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNE--QDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~--~dW~~cL 54 (417)
+.|++|..|.++|||+. | |++||+|++|||.+|.+. ++....+
T Consensus 28 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~ 74 (92)
T 2qg1_A 28 DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALL 74 (92)
T ss_dssp SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 35999999999999988 8 999999999999999874 4444444
No 72
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=97.77 E-value=3.1e-05 Score=63.95 Aligned_cols=43 Identities=26% Similarity=0.305 Sum_probs=37.9
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChhh--HHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQD--WMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~d--W~~cL 54 (417)
..|++|..|.++|||+. +|++||+|++|||.+|.+.++ +.+.+
T Consensus 40 ~~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~ 85 (114)
T 1x5n_A 40 KPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVNVL 85 (114)
T ss_dssp SCSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCTTHHHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 46999999999999998 899999999999999998754 55555
No 73
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=97.76 E-value=1.6e-05 Score=62.40 Aligned_cols=43 Identities=16% Similarity=0.436 Sum_probs=36.6
Q ss_pred CCceEEEEeCCCCCCC--CCCCCCCeEEeeCCeecCCh--hhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLS--GYLSPGDVIVSLDGIHIHNE--QDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~--ggL~~GDvI~sINgc~V~~~--~dW~~cL 54 (417)
+.|++|..|.++|||+ ++|++||+|++|||.+|.+. +++.+.+
T Consensus 27 ~~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~ 73 (87)
T 4e34_A 27 GVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTIL 73 (87)
T ss_dssp TEEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3579999999999999 58999999999999999765 5555555
No 74
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=97.76 E-value=2.3e-05 Score=62.51 Aligned_cols=44 Identities=14% Similarity=0.280 Sum_probs=39.6
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeec--CChhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHI--HNEQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V--~~~~dW~~cL~ 55 (417)
+.|++|..|.++|||+. | |++||+|++|||.+| .+.++..+.|.
T Consensus 27 ~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~ 74 (93)
T 3o46_A 27 TGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILA 74 (93)
T ss_dssp TCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 47899999999999998 7 999999999999999 67777777774
No 75
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.76 E-value=2.1e-05 Score=65.37 Aligned_cols=44 Identities=14% Similarity=0.348 Sum_probs=39.6
Q ss_pred CCceEEEEeCCCCCCCC-CC-CCCCeEEeeCCeecC--ChhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YL-SPGDVIVSLDGIHIH--NEQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL-~~GDvI~sINgc~V~--~~~dW~~cL~ 55 (417)
+.|++|..|.++|||+. || ++||+|++|||.+|. +.+++.+.|.
T Consensus 47 ~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~ 94 (113)
T 1va8_A 47 MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLS 94 (113)
T ss_dssp SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57999999999999998 88 999999999999999 5667777774
No 76
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=97.76 E-value=2.1e-05 Score=64.61 Aligned_cols=43 Identities=16% Similarity=0.244 Sum_probs=39.6
Q ss_pred CceEEEEeCCCCCCCC-CC-CCCCeEEeeCCeecCC--hhhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-YL-SPGDVIVSLDGIHIHN--EQDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-gL-~~GDvI~sINgc~V~~--~~dW~~cL~ 55 (417)
.|++|.+|.++|||+. || ++||+|++|||.+|.+ .+++.+.+.
T Consensus 26 ~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~ 72 (112)
T 1qau_A 26 PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLR 72 (112)
T ss_dssp SCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred CCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4899999999999998 87 9999999999999999 888888884
No 77
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=97.75 E-value=2e-05 Score=62.80 Aligned_cols=44 Identities=18% Similarity=0.228 Sum_probs=38.7
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeec--CChhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHI--HNEQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V--~~~~dW~~cL~ 55 (417)
..|++|..|.++|||+. | |++||+|++|||.+| .+.++..+.+.
T Consensus 20 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~ 67 (88)
T 3e17_A 20 GSQIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIE 67 (88)
T ss_dssp EEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred eCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45899999999999998 7 999999999999999 56677777774
No 78
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.75 E-value=3.1e-05 Score=64.32 Aligned_cols=42 Identities=26% Similarity=0.480 Sum_probs=36.5
Q ss_pred CceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCChhhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNEQDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~~dW~~cL~ 55 (417)
.|++|..|.++|||+. | |++||+|++|||.+|.+.. |.+.+.
T Consensus 50 ~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~-~~~~~~ 93 (117)
T 2ehr_A 50 KGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNAS-HSEAVE 93 (117)
T ss_dssp CSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCC-HHHHHH
T ss_pred CCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCC-HHHHHH
Confidence 6999999999999999 8 9999999999999998754 444443
No 79
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=97.75 E-value=1.9e-05 Score=64.78 Aligned_cols=43 Identities=12% Similarity=0.284 Sum_probs=38.2
Q ss_pred CceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL~ 55 (417)
.|++|..|.++|||+. | |++||+|++|||.+|.+ .++..+.+.
T Consensus 39 ~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~ 85 (111)
T 2koj_A 39 APIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLR 85 (111)
T ss_dssp SCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred cCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 6899999999999998 8 99999999999999976 467776664
No 80
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.75 E-value=1.7e-05 Score=67.10 Aligned_cols=45 Identities=29% Similarity=0.346 Sum_probs=41.0
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHHHh
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVAAL 56 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL~~ 56 (417)
..|++|..|.++|||+. | |++||+|++|||.+|.+ .++..+.|..
T Consensus 45 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~ 93 (129)
T 2dmz_A 45 ASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRN 93 (129)
T ss_dssp CCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 47999999999999997 8 99999999999999999 8888888853
No 81
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.74 E-value=2e-05 Score=66.41 Aligned_cols=44 Identities=23% Similarity=0.261 Sum_probs=39.2
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecC--ChhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIH--NEQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~--~~~dW~~cL~ 55 (417)
+.|++|..|.++|||+. | |++||+|++|||.+|. +.++..+.|.
T Consensus 43 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 90 (123)
T 1ueq_A 43 DEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQ 90 (123)
T ss_dssp SCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 46799999999999997 7 9999999999999999 5677777774
No 82
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=97.74 E-value=1.3e-05 Score=63.95 Aligned_cols=36 Identities=19% Similarity=0.324 Sum_probs=33.4
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCCh
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNE 47 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~ 47 (417)
..|++|..|.++|||+. | |++||+|++|||.+|.+.
T Consensus 28 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~ 65 (95)
T 2vwr_A 28 EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYG 65 (95)
T ss_dssp SCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTC
T ss_pred CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCC
Confidence 45999999999999988 7 999999999999999875
No 83
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.74 E-value=1.3e-05 Score=65.93 Aligned_cols=44 Identities=18% Similarity=0.190 Sum_probs=38.2
Q ss_pred CceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChhhHHHHHHh
Q 042181 13 EGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQDWMEVAAL 56 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~dW~~cL~~ 56 (417)
.|+.|..+.|+||++. ||++||+|++|||.+|.+.+|+.+.+..
T Consensus 37 ~G~~V~~~~pas~A~~aGl~~GDvI~~ing~~v~~~~d~~~~~~~ 81 (105)
T 2i4s_A 37 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQS 81 (105)
T ss_dssp EEEEEEECSCTHHHHHHTCCTTCEEEEETTEETTSTTHHHHHHHH
T ss_pred EEEEEecCCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHh
Confidence 3677777777777787 9999999999999999999999988854
No 84
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=97.73 E-value=1.9e-05 Score=64.47 Aligned_cols=43 Identities=12% Similarity=0.170 Sum_probs=36.4
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCChhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNEQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~~dW~~cL~ 55 (417)
+.|++|.+|.++|||+. | |++||+|++|||.+|.+. +|.+.+.
T Consensus 32 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~-~~~~~~~ 76 (105)
T 2awx_A 32 DNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEV-THEEAVT 76 (105)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTC-BHHHHHH
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCC-CHHHHHH
Confidence 35999999999999988 8 999999999999999874 3444443
No 85
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=97.73 E-value=2.1e-05 Score=65.14 Aligned_cols=43 Identities=19% Similarity=0.139 Sum_probs=37.9
Q ss_pred CceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCC--hhhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHN--EQDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~--~~dW~~cL~ 55 (417)
.|++|..|.++|||+. ||++||+|++|||.+|.+ .++..+.+.
T Consensus 35 ~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~l~~~l~ 80 (94)
T 3kzd_A 35 RRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLS 80 (94)
T ss_dssp CEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHH
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 4899999999999998 999999999999999995 566666663
No 86
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=97.73 E-value=2.8e-05 Score=65.58 Aligned_cols=45 Identities=16% Similarity=0.033 Sum_probs=40.0
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecC--ChhhHHHHHHh
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIH--NEQDWMEVAAL 56 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~--~~~dW~~cL~~ 56 (417)
+.+.+|.+|.++|||+. ||++||+|++|||.+|. +.+|+.+.+.+
T Consensus 38 ~~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~dv~~~i~~ 85 (101)
T 3qik_A 38 NKAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEVESILNQ 85 (101)
T ss_dssp TTEEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHHHHHHHHH
T ss_pred CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHHHHHHHHH
Confidence 67889999999999999 99999999999999984 77788777754
No 87
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=97.72 E-value=1.4e-05 Score=66.34 Aligned_cols=44 Identities=18% Similarity=0.246 Sum_probs=38.3
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecC---ChhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIH---NEQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~---~~~dW~~cL~ 55 (417)
..|++|..|.++|||+. | |++||+|++|||.+|. +.++..+.+.
T Consensus 48 ~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~ 96 (117)
T 2o2t_A 48 ELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQ 96 (117)
T ss_dssp CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHH
Confidence 35899999999999998 8 9999999999999998 6666666663
No 88
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.72 E-value=1.2e-05 Score=64.46 Aligned_cols=36 Identities=22% Similarity=0.246 Sum_probs=33.6
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCCh
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNE 47 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~ 47 (417)
..|++|..|.++|||+. +|++||+|++|||.+|.+.
T Consensus 31 ~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~ 67 (94)
T 2eeg_A 31 SAPLTISRVHAGSKAALAALCPGDLIQAINGESTELM 67 (94)
T ss_dssp TSCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCC
Confidence 46899999999999997 8999999999999999985
No 89
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=97.72 E-value=2.5e-05 Score=62.61 Aligned_cols=36 Identities=19% Similarity=0.338 Sum_probs=33.6
Q ss_pred CceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCChh
Q 042181 13 EGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNEQ 48 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~~ 48 (417)
.|++|..|.++|||+. | |++||+|++|||.+|.+.+
T Consensus 30 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~ 67 (98)
T 2opg_A 30 GAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKAT 67 (98)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCC
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCC
Confidence 5999999999999997 8 9999999999999999853
No 90
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=97.72 E-value=3.3e-05 Score=68.82 Aligned_cols=44 Identities=27% Similarity=0.432 Sum_probs=38.6
Q ss_pred eCCceEEEEeCCCCCCCCCCCCCCeEEeeCCeecCChhhHHHHHH
Q 042181 11 QCEGTMVLDVPSTSPLSGYLSPGDVIVSLDGIHIHNEQDWMEVAA 55 (417)
Q Consensus 11 ~g~Gv~V~~V~~~SPl~ggL~~GDvI~sINgc~V~~~~dW~~cL~ 55 (417)
.+.|++|..|.++|||+++|++||+|++|||.+|.+.. +.+.+.
T Consensus 22 ~~~g~~V~~v~~~spA~~gl~~GD~I~~vng~~v~~~~-~~~~~~ 65 (195)
T 2qbw_A 22 DDDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIE-HGQAVS 65 (195)
T ss_dssp TCCSEEEEEECTTSTTTTTCCTTCEEEEETTEECTTCC-HHHHHH
T ss_pred CCCCEEEEEECCCChHHhCCCCCCEEEEECCEECCCCC-HHHHHH
Confidence 36799999999999999999999999999999999865 555553
No 91
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.71 E-value=1.9e-05 Score=66.74 Aligned_cols=44 Identities=27% Similarity=0.286 Sum_probs=38.3
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChhhHHHHHHh
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQDWMEVAAL 56 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~dW~~cL~~ 56 (417)
+.|++|..|.++|||+. ||++||+|++|||.+|.+.++ .+.+..
T Consensus 45 ~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~-~~~~~~ 89 (128)
T 1uf1_A 45 GLGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILH-DEAVRL 89 (128)
T ss_dssp TCCCEEEEECTTCHHHHHTCCTTCEEEEETTEECSSCCH-HHHHHH
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCH-HHHHHH
Confidence 35999999999999998 999999999999999999765 555543
No 92
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=97.71 E-value=2.3e-05 Score=62.95 Aligned_cols=42 Identities=7% Similarity=0.168 Sum_probs=37.0
Q ss_pred CceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVA 54 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL 54 (417)
.|++|..|.++|||+. | |++||+|++|||.+|.+ .++..+.+
T Consensus 30 ~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l 75 (97)
T 1n7e_A 30 DPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLL 75 (97)
T ss_dssp SCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 6999999999999998 8 99999999999999986 45555555
No 93
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=97.71 E-value=2.6e-05 Score=63.56 Aligned_cols=42 Identities=14% Similarity=0.246 Sum_probs=37.9
Q ss_pred ceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecC--ChhhHHHHHH
Q 042181 14 GTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIH--NEQDWMEVAA 55 (417)
Q Consensus 14 Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~--~~~dW~~cL~ 55 (417)
+++|..|.++|||+. ||++||+|++|||.+|. +.+++.+.+.
T Consensus 44 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~ 88 (107)
T 3qe1_A 44 LQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIR 88 (107)
T ss_dssp CEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred ceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 457999999999998 89999999999999999 6688888885
No 94
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=97.71 E-value=2.3e-05 Score=65.89 Aligned_cols=44 Identities=18% Similarity=0.080 Sum_probs=39.5
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecC--ChhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIH--NEQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~--~~~dW~~cL~ 55 (417)
..|++|..|.++|||+. ||++||+|++|||.+|. +.++..+.+.
T Consensus 43 ~~~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~dv~~~i~ 89 (109)
T 2vsv_A 43 NAPVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSEVMKLLK 89 (109)
T ss_dssp SSSCEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 56889999999999998 99999999999999999 6678877774
No 95
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=97.71 E-value=2e-05 Score=66.32 Aligned_cols=44 Identities=18% Similarity=0.216 Sum_probs=37.1
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecC--ChhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIH--NEQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~--~~~dW~~cL~ 55 (417)
+.|++|..|.++|||+. | |++||+|++|||.+|. +.++..+.+.
T Consensus 52 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 99 (117)
T 2fne_A 52 DLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILK 99 (117)
T ss_dssp EEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 35899999999999987 7 9999999999999999 5555555553
No 96
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.71 E-value=2.3e-05 Score=64.16 Aligned_cols=44 Identities=16% Similarity=0.298 Sum_probs=37.7
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecC--ChhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIH--NEQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~--~~~dW~~cL~ 55 (417)
+.|++|..|.++|||+. | |++||+|++|||.+|. +.++....+.
T Consensus 41 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 88 (108)
T 1q7x_A 41 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLR 88 (108)
T ss_dssp SCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHHHH
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 47999999999999998 8 9999999999999999 4555555553
No 97
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=97.70 E-value=2.6e-05 Score=62.94 Aligned_cols=43 Identities=26% Similarity=0.324 Sum_probs=37.0
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCCh--hhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNE--QDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~--~dW~~cL 54 (417)
+.|++|..|.++|||+. | |++||+|++|||.+|.+. ++..+.+
T Consensus 36 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~ 82 (101)
T 2jik_A 36 DSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLF 82 (101)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 46999999999999997 8 999999999999999885 4444444
No 98
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=97.69 E-value=3e-05 Score=65.43 Aligned_cols=43 Identities=12% Similarity=0.275 Sum_probs=38.2
Q ss_pred CceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL~ 55 (417)
.|++|..|.++|||+. | |++||+|++|||.+|.+ .++..+.+.
T Consensus 58 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~ 104 (121)
T 2kom_A 58 APIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLR 104 (121)
T ss_dssp CCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHH
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Confidence 6899999999999998 8 99999999999999998 466666664
No 99
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=97.69 E-value=2.7e-05 Score=65.23 Aligned_cols=43 Identities=16% Similarity=0.265 Sum_probs=38.3
Q ss_pred CceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeec--CChhhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHI--HNEQDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V--~~~~dW~~cL~ 55 (417)
.|++|..|.++|||+. | |++||+|++|||.+| .+.++..+.+.
T Consensus 50 ~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~ 96 (114)
T 2gzv_A 50 PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQ 96 (114)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4799999999999998 8 999999999999999 67777777664
No 100
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.69 E-value=2.9e-05 Score=61.50 Aligned_cols=43 Identities=16% Similarity=0.248 Sum_probs=36.8
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL 54 (417)
+.|++|..|.++|||+. + |++||+|++|||.+|.+ .++..+.+
T Consensus 29 ~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~ 75 (93)
T 2dkr_A 29 NSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELL 75 (93)
T ss_dssp SCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 47999999999999996 5 99999999999999996 35555555
No 101
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.69 E-value=2.5e-05 Score=65.77 Aligned_cols=45 Identities=16% Similarity=0.245 Sum_probs=40.7
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHHHh
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVAAL 56 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL~~ 56 (417)
+.+++|..|.++|||+. + |++||+|++|||.+|.+ .+++.+.|..
T Consensus 44 ~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 92 (122)
T 1v5q_A 44 SSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRD 92 (122)
T ss_dssp SSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 35789999999999998 8 99999999999999988 8899888854
No 102
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=97.69 E-value=1.8e-05 Score=63.87 Aligned_cols=36 Identities=19% Similarity=0.206 Sum_probs=33.9
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCCh
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNE 47 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~ 47 (417)
..|++|.+|.++|||+. | |++||+|++|||.+|.+.
T Consensus 30 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~ 67 (96)
T 2qkv_A 30 EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGL 67 (96)
T ss_dssp SSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTC
T ss_pred CCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCC
Confidence 57999999999999998 8 999999999999999874
No 103
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=97.69 E-value=2.7e-05 Score=62.03 Aligned_cols=44 Identities=16% Similarity=0.225 Sum_probs=39.2
Q ss_pred CceEEEEeCCCCCCCC--CCCCCCeEEeeCCeecC--ChhhHHHHHHh
Q 042181 13 EGTMVLDVPSTSPLSG--YLSPGDVIVSLDGIHIH--NEQDWMEVAAL 56 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g--gL~~GDvI~sINgc~V~--~~~dW~~cL~~ 56 (417)
.|++|..|.++|||+. +|++||.|++|||.+|. +.+++.+.|..
T Consensus 25 ~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~ 72 (88)
T 1kwa_A 25 NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLRE 72 (88)
T ss_dssp GGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 5799999999999997 69999999999999999 77888877743
No 104
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=97.68 E-value=1.8e-05 Score=65.67 Aligned_cols=37 Identities=19% Similarity=0.199 Sum_probs=34.3
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCChh
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNEQ 48 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~~ 48 (417)
..|++|.+|.++|||+. | |++||+|++|||.+|.+..
T Consensus 24 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~ 62 (106)
T 2la8_A 24 EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLP 62 (106)
T ss_dssp SSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCC
Confidence 57999999999999998 8 9999999999999998743
No 105
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.68 E-value=2.7e-05 Score=63.21 Aligned_cols=43 Identities=16% Similarity=0.177 Sum_probs=36.8
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCCh--hhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNE--QDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~--~dW~~cL 54 (417)
+.|++|..|.++|||+. + |++||+|++|||.+|.+. ++..+.+
T Consensus 37 ~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~ 83 (104)
T 2djt_A 37 DTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERI 83 (104)
T ss_dssp ECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 47899999999999998 8 999999999999999984 4444444
No 106
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.68 E-value=3e-05 Score=62.54 Aligned_cols=42 Identities=10% Similarity=0.237 Sum_probs=37.3
Q ss_pred CceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecC--ChhhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIH--NEQDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~--~~~dW~~cL~ 55 (417)
.| +|..|.++|||+. ||++||+|++|||.+|. +.+++.+.+.
T Consensus 32 ~G-~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~ 76 (90)
T 1y7n_A 32 NG-IICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILS 76 (90)
T ss_dssp TT-EEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHHHHHHHH
T ss_pred CC-EEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 35 8999999999998 99999999999999995 6778877774
No 107
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=97.67 E-value=3.4e-05 Score=64.82 Aligned_cols=43 Identities=9% Similarity=0.166 Sum_probs=37.3
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecC--ChhhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIH--NEQDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~--~~~dW~~cL 54 (417)
+.|++|..|.++|||+. | |++||+|++|||.+|. +.++..+.+
T Consensus 53 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 99 (117)
T 2byg_A 53 DNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAIL 99 (117)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 46899999999999998 8 9999999999999999 455555555
No 108
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=97.67 E-value=3.2e-05 Score=62.50 Aligned_cols=42 Identities=24% Similarity=0.352 Sum_probs=35.7
Q ss_pred CceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCCh--hhHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNE--QDWMEVA 54 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~--~dW~~cL 54 (417)
.|++|..|.++|||+. | |++||+|++|||.+|.+. ++....+
T Consensus 35 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~ 80 (104)
T 3i4w_A 35 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIAL 80 (104)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHH
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3999999999999998 8 999999999999999663 4444444
No 109
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.67 E-value=3.3e-05 Score=63.46 Aligned_cols=44 Identities=18% Similarity=0.299 Sum_probs=38.5
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL~ 55 (417)
+.|++|..|.++|||+. | |++||+|++|||.+|.+ .++..+.+.
T Consensus 37 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~ 84 (111)
T 2dlu_A 37 TSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLR 84 (111)
T ss_dssp SSSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 36999999999999998 8 99999999999999985 466666664
No 110
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.65 E-value=4.1e-05 Score=63.76 Aligned_cols=42 Identities=21% Similarity=0.280 Sum_probs=35.4
Q ss_pred CceEEEEeCCCCCCCC---CCCCCCeEEeeCCeecCCh--hhHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG---YLSPGDVIVSLDGIHIHNE--QDWMEVA 54 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g---gL~~GDvI~sINgc~V~~~--~dW~~cL 54 (417)
.|++|..|.++|||+. +|++||+|++|||.+|.+. ++..+.+
T Consensus 41 ~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~ 87 (119)
T 2cs5_A 41 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFI 87 (119)
T ss_dssp EEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHH
T ss_pred CCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3799999999999987 8999999999999999874 3344444
No 111
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=97.65 E-value=5.2e-05 Score=73.52 Aligned_cols=44 Identities=23% Similarity=0.335 Sum_probs=41.6
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~dW~~cL~ 55 (417)
..|++|.+|.++|||++ ||++||+|++|||.+|.+.+++.+.|.
T Consensus 243 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~l~~~l~ 287 (318)
T 1te0_A 243 LQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVA 287 (318)
T ss_dssp CCCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCCHHHHHHHHH
T ss_pred CCcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCCHHHHHHHHH
Confidence 57999999999999999 899999999999999999999998884
No 112
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=97.65 E-value=3.3e-05 Score=68.00 Aligned_cols=44 Identities=14% Similarity=0.203 Sum_probs=39.0
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL~ 55 (417)
..|++|..|.++|||+. | |++||+|++|||.+|.+ .+++.+.|.
T Consensus 129 ~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 176 (196)
T 3gsl_A 129 DNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALK 176 (196)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHH
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHH
Confidence 46899999999999988 7 99999999999999998 666666663
No 113
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=97.64 E-value=1.5e-05 Score=63.11 Aligned_cols=42 Identities=24% Similarity=0.309 Sum_probs=38.2
Q ss_pred ceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChhhHHHHHH
Q 042181 14 GTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQDWMEVAA 55 (417)
Q Consensus 14 Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~dW~~cL~ 55 (417)
.++|.+|.++|||+. ||++||+|++|||.+|.+.+++.+.+.
T Consensus 5 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~ 47 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAGLQAGDRIVXVDGQPLTQWVTFVMLVR 47 (91)
T ss_dssp -CBCSEECTTSHHHHTTCCTTCEEEEETTEECCCHHHHHHHHH
T ss_pred CeEEEEECCCChHHhcCCCCCCEEEEECCeEcCCHHHHHHHHh
Confidence 367889999999987 999999999999999999999998885
No 114
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=97.64 E-value=3e-05 Score=64.31 Aligned_cols=42 Identities=19% Similarity=0.240 Sum_probs=35.9
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCChhhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNEQDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~~dW~~cL 54 (417)
+.|++|..|.++|||+. | |++||+|++|||.+|.+. +|.+.+
T Consensus 48 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~-~~~~~~ 91 (112)
T 2r4h_A 48 NMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNM-KHSRAI 91 (112)
T ss_dssp TCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTC-CHHHHH
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCC-CHHHHH
Confidence 46899999999999998 8 999999999999999875 334433
No 115
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.63 E-value=5.6e-05 Score=62.62 Aligned_cols=43 Identities=23% Similarity=0.281 Sum_probs=38.7
Q ss_pred ceEEEEeCCCCCCCC--CCCCCCeEEeeCCeecCC--hhhHHHHHHh
Q 042181 14 GTMVLDVPSTSPLSG--YLSPGDVIVSLDGIHIHN--EQDWMEVAAL 56 (417)
Q Consensus 14 Gv~V~~V~~~SPl~g--gL~~GDvI~sINgc~V~~--~~dW~~cL~~ 56 (417)
+++|..|.++|||+. +|++||+|++|||.+|.+ .+++.+.|..
T Consensus 44 ~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~~~l~~ 90 (114)
T 1uew_A 44 PHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLIKD 90 (114)
T ss_dssp SCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHHHHHH
T ss_pred CeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 679999999999997 899999999999999999 4888888853
No 116
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.63 E-value=2.5e-05 Score=65.43 Aligned_cols=45 Identities=20% Similarity=0.156 Sum_probs=40.4
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecC--ChhhHHHHHHh
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIH--NEQDWMEVAAL 56 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~--~~~dW~~cL~~ 56 (417)
+.|++|..|.++|||+. ||++||+|++|||.+|. +.++..+.|..
T Consensus 35 ~~~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d~~~~i~~ 82 (111)
T 1vae_A 35 NTPVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKS 82 (111)
T ss_dssp SSSCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 56889999999999998 89999999999999999 78888877753
No 117
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.63 E-value=2.4e-05 Score=65.10 Aligned_cols=43 Identities=19% Similarity=0.273 Sum_probs=36.5
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCeEEeeCCeecCCh--hhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSGYLSPGDVIVSLDGIHIHNE--QDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~ggL~~GDvI~sINgc~V~~~--~dW~~cL 54 (417)
..|++|..|.++|||+++|++||+|++|||.+|.+. ++....+
T Consensus 45 ~~gv~V~~V~~~spA~~gL~~GD~I~~Vng~~v~~~~~~~~~~~l 89 (117)
T 2csj_A 45 ETSIVISDVLPGGPADGLLQENDRVVMVNGTPMEDVLHSFAVQQL 89 (117)
T ss_dssp CCBCEEEEECTTSSHHHHBCTTCEEEEESSCBCBTCCHHHHHHHH
T ss_pred CCCEEEEEECCCCcccccCCCCCEEEEECCEECCCcCHHHHHHHH
Confidence 458999999999999889999999999999999874 3444444
No 118
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.62 E-value=3.5e-05 Score=64.39 Aligned_cols=43 Identities=23% Similarity=0.291 Sum_probs=37.4
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCChh--hHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNEQ--DWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~~--dW~~cL 54 (417)
+.|++|..|.++|||+. + |++||+|++|||.+|.+.+ +....+
T Consensus 46 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~ 92 (120)
T 2eno_A 46 DSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLF 92 (120)
T ss_dssp CCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHH
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 56999999999999997 7 9999999999999999854 555544
No 119
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.62 E-value=1.9e-05 Score=64.20 Aligned_cols=44 Identities=16% Similarity=0.085 Sum_probs=38.8
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCC--hhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHN--EQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~--~~dW~~cL~ 55 (417)
..|++|..|.++|||+. ||++||+|++|||.+|.+ .++..+.+.
T Consensus 35 ~~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~ 81 (100)
T 1whd_A 35 DSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIR 81 (100)
T ss_dssp SSSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 57899999999999998 999999999999999995 577776664
No 120
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=97.61 E-value=4.4e-05 Score=62.85 Aligned_cols=43 Identities=9% Similarity=0.180 Sum_probs=36.1
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL 54 (417)
+.|++|..|.++|||+. | |++||+|++|||.+|.+ .++....+
T Consensus 31 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 77 (106)
T 4amh_A 31 DNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTAL 77 (106)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 45999999999999988 8 99999999999999977 34444444
No 121
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.61 E-value=2.2e-05 Score=63.86 Aligned_cols=36 Identities=22% Similarity=0.278 Sum_probs=33.3
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCCh
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNE 47 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~ 47 (417)
+.+++|..|.++|||+. ||++||+|++|||.+|.+.
T Consensus 28 ~~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~ 64 (103)
T 1wf7_A 28 NMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGM 64 (103)
T ss_dssp TEEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCC
Confidence 34689999999999998 8999999999999999986
No 122
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=97.61 E-value=2.5e-05 Score=65.07 Aligned_cols=43 Identities=16% Similarity=0.225 Sum_probs=37.2
Q ss_pred CceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL~ 55 (417)
.|++|..|.++|||+. | |++||+|++|||.+|.+ .++..+.+.
T Consensus 42 ~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~ 88 (119)
T 1x6d_A 42 KVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILR 88 (119)
T ss_dssp SSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHH
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 5899999999999998 8 99999999999999984 555555553
No 123
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=97.60 E-value=4.3e-05 Score=60.56 Aligned_cols=36 Identities=22% Similarity=0.399 Sum_probs=33.6
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCCh
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNE 47 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~ 47 (417)
..|++|..|.++|||+. | |++||+|++|||.+|.+.
T Consensus 32 ~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~ 69 (97)
T 2iwn_A 32 PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGF 69 (97)
T ss_dssp CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTS
T ss_pred CCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCC
Confidence 46999999999999998 8 999999999999999975
No 124
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=97.60 E-value=3.6e-05 Score=75.13 Aligned_cols=44 Identities=30% Similarity=0.432 Sum_probs=41.6
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~dW~~cL~ 55 (417)
..|++|.+|.++|||++ ||++||+|++|||.+|.+.+|+.+.+.
T Consensus 255 ~~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v~~~~~l~~~l~ 299 (325)
T 1lcy_A 255 QHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVYEAVR 299 (325)
T ss_dssp SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHT
T ss_pred CCCeEEEEeCcCChHHHCCCCCCCEEEEECCEEcCCHHHHHHHHh
Confidence 47999999999999998 999999999999999999999999884
No 125
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=97.60 E-value=6.9e-05 Score=64.40 Aligned_cols=43 Identities=12% Similarity=0.152 Sum_probs=37.4
Q ss_pred CceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCC--hhhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHN--EQDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~--~~dW~~cL~ 55 (417)
.|++|..|.++|||+. ||++||+|++|||.+|.+ .++..+.+.
T Consensus 65 ~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~ 110 (132)
T 3l4f_D 65 ALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIR 110 (132)
T ss_dssp CSEEEEEECTTSGGGGGTCCTTCEEEEESSSBCTTSCHHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3899999999999998 999999999999999985 555666653
No 126
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.59 E-value=4.2e-05 Score=62.75 Aligned_cols=42 Identities=21% Similarity=0.362 Sum_probs=35.5
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCChhhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNEQDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~~dW~~cL 54 (417)
..|++|..|.++|||+. | |++||+|++|||.+|.+. +|.+..
T Consensus 35 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~-~~~~~~ 78 (110)
T 1um1_A 35 APGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGL-GYLRAV 78 (110)
T ss_dssp CSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSC-CHHHHH
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCC-CHHHHH
Confidence 46899999999999998 8 999999999999999863 344444
No 127
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.59 E-value=1.2e-05 Score=68.07 Aligned_cols=44 Identities=18% Similarity=0.259 Sum_probs=40.1
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecC--ChhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIH--NEQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~--~~~dW~~cL~ 55 (417)
+.|++|..|.++|||+. ||++||+|++|||.+|. +.++..+.|.
T Consensus 60 ~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~ 106 (126)
T 2yuy_A 60 MDTIFVKQVKEGGPAFEAGLCTGDRIIKVNGESVIGKTYSQVIALIQ 106 (126)
T ss_dssp CCCCCBCCCCSSSHHHHHTCCSSCCCCEETTEECSSCCHHHHHHHHH
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 36899999999999998 89999999999999998 7888888774
No 128
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=97.58 E-value=4.3e-05 Score=62.32 Aligned_cols=42 Identities=24% Similarity=0.200 Sum_probs=35.5
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCChhhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNEQDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~~dW~~cL 54 (417)
..|++|..|.++|||+. | |++||+|++|||.+|.+. +|.++.
T Consensus 37 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~-~~~~~~ 80 (106)
T 3axa_A 37 KLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGL-SQERAA 80 (106)
T ss_dssp SEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTC-CHHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCC-CHHHHH
Confidence 45899999999999998 8 999999999999999863 234443
No 129
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.57 E-value=3.6e-05 Score=65.06 Aligned_cols=42 Identities=19% Similarity=0.109 Sum_probs=36.9
Q ss_pred CceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCCh--hhHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNE--QDWMEVA 54 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~--~dW~~cL 54 (417)
.|++|..|.++|||+. ||++||+|++|||.+|.+. +++.+.+
T Consensus 44 ~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l 88 (114)
T 2d8i_A 44 RRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFL 88 (114)
T ss_dssp EEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCCHHHHHHHH
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHH
Confidence 5899999999999998 9999999999999999984 4555555
No 130
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=97.56 E-value=5.3e-05 Score=64.14 Aligned_cols=43 Identities=16% Similarity=0.363 Sum_probs=38.5
Q ss_pred CceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecC--ChhhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIH--NEQDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~--~~~dW~~cL~ 55 (417)
.|++|..|.++|||+. | |++||+|++|||.+|. +.++..+.+.
T Consensus 53 ~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 99 (118)
T 3b76_A 53 LPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLK 99 (118)
T ss_dssp CCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4799999999999998 8 9999999999999999 6777777764
No 131
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.56 E-value=2.1e-05 Score=64.80 Aligned_cols=43 Identities=14% Similarity=0.181 Sum_probs=36.6
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL 54 (417)
..|++|..|.++|||+. | |++||+|++|||.+|.+ .++..+.+
T Consensus 43 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l 89 (111)
T 1uju_A 43 DEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLL 89 (111)
T ss_dssp CCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 56899999999999988 8 99999999999999995 44444444
No 132
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.55 E-value=4.2e-05 Score=62.59 Aligned_cols=43 Identities=23% Similarity=0.210 Sum_probs=36.8
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL 54 (417)
..|++|..|.++|||+. | |++||+|++|||.+|.+ ..+....+
T Consensus 39 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~ 85 (107)
T 1wf8_A 39 KLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVL 85 (107)
T ss_dssp EEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHH
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 46899999999999998 8 99999999999999986 44444555
No 133
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=97.54 E-value=9.5e-05 Score=71.64 Aligned_cols=44 Identities=14% Similarity=0.236 Sum_probs=41.5
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~dW~~cL~ 55 (417)
..|++|.+|.++|||++ ||++||+|++|||.+|.+.+++.+.+.
T Consensus 241 ~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~l~~~l~ 285 (324)
T 1y8t_A 241 TLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVR 285 (324)
T ss_dssp SSSEEEEEECTTSTTTTTTCCTTCEEEEETTEECCSHHHHHHHHH
T ss_pred CCceEEEEECCCChHHHcCCCCCCEEEEECCEECCCHHHHHHHHH
Confidence 57999999999999999 899999999999999999999988884
No 134
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=97.54 E-value=4.8e-05 Score=62.70 Aligned_cols=37 Identities=19% Similarity=0.239 Sum_probs=33.9
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCChh
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNEQ 48 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~~ 48 (417)
..|++|..|.++|||+. | |++||+|++|||.+|.+.+
T Consensus 34 ~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~ 72 (113)
T 2g5m_B 34 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVT 72 (113)
T ss_dssp CEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCC
Confidence 46999999999999998 8 9999999999999998743
No 135
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.54 E-value=3.2e-05 Score=63.95 Aligned_cols=42 Identities=17% Similarity=0.342 Sum_probs=36.7
Q ss_pred CceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVA 54 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL 54 (417)
.|++|..|.++|||+. | |++||+|++|||.+|.+ .++..+.+
T Consensus 43 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l 88 (116)
T 2dm8_A 43 NAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITAL 88 (116)
T ss_dssp SSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHH
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 5999999999999998 8 99999999999999998 45555555
No 136
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=97.53 E-value=4.4e-05 Score=75.55 Aligned_cols=44 Identities=25% Similarity=0.297 Sum_probs=41.9
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~dW~~cL~ 55 (417)
..|++|.+|.++|||++ ||++||+|++|||.+|.+.+|+.+.+.
T Consensus 262 ~~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~v~~~~~l~~~l~ 306 (345)
T 3stj_A 262 QRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIA 306 (345)
T ss_dssp CSSEEEEEECTTSHHHHHTCCTTCEECEETTEECSCHHHHHHHHH
T ss_pred CceEEEEEeccCChHHHcCCCCCCEEEEECCEECCCHHHHHHHHH
Confidence 48999999999999998 999999999999999999999999885
No 137
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=97.52 E-value=5.7e-05 Score=64.14 Aligned_cols=44 Identities=11% Similarity=0.232 Sum_probs=38.6
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeec--CChhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHI--HNEQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V--~~~~dW~~cL~ 55 (417)
..|++|..|.++|||+. | |++||+|++|||.+| .+.++..+.+.
T Consensus 64 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~ 111 (128)
T 1nf3_C 64 VPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMI 111 (128)
T ss_dssp EEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 35899999999999998 8 999999999999999 55777777764
No 138
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=97.52 E-value=3.8e-05 Score=62.80 Aligned_cols=43 Identities=16% Similarity=0.404 Sum_probs=36.3
Q ss_pred CceEEEEeCCCCCCCC--CCCCCCeEEeeCCeecCChhhHHHHHHh
Q 042181 13 EGTMVLDVPSTSPLSG--YLSPGDVIVSLDGIHIHNEQDWMEVAAL 56 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g--gL~~GDvI~sINgc~V~~~~dW~~cL~~ 56 (417)
.|++|..|.++|||+. +|++||+|++|||.+|.+. +|.++...
T Consensus 35 ~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~-~~~~~~~~ 79 (103)
T 2dc2_A 35 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDT-KHKEAVTI 79 (103)
T ss_dssp EEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTS-CHHHHHHH
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCC-CHHHHHHH
Confidence 4899999999999996 8999999999999999874 45555433
No 139
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=97.52 E-value=4.6e-05 Score=63.34 Aligned_cols=37 Identities=27% Similarity=0.454 Sum_probs=34.4
Q ss_pred CceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCChhh
Q 042181 13 EGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNEQD 49 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~~d 49 (417)
.|++|..|.++|||+. | |++||+|++|||.+|.+.++
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~ 76 (119)
T 1tp5_A 38 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASH 76 (119)
T ss_dssp CCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 6999999999999998 8 99999999999999998654
No 140
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=97.51 E-value=4.5e-05 Score=64.46 Aligned_cols=43 Identities=19% Similarity=0.220 Sum_probs=36.6
Q ss_pred CceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecC---ChhhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIH---NEQDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~---~~~dW~~cL~ 55 (417)
.|++|..|.++|||+. | |++||+|++|||.+|. +.++..+.|.
T Consensus 54 ~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~ 101 (128)
T 2db5_A 54 VDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQ 101 (128)
T ss_dssp EEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHH
Confidence 3899999999999987 8 9999999999999998 5555555553
No 141
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.51 E-value=4.2e-05 Score=62.23 Aligned_cols=43 Identities=12% Similarity=0.261 Sum_probs=36.3
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCCh--hhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNE--QDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~--~dW~~cL 54 (417)
..|++|..|.++|||+. ||++||+|++|||.+|.+. ++....+
T Consensus 31 ~~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~ 76 (106)
T 2eei_A 31 KKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEKV 76 (106)
T ss_dssp CCSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 46899999999999998 9999999999999999853 4444444
No 142
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.51 E-value=3.2e-05 Score=62.39 Aligned_cols=42 Identities=19% Similarity=0.286 Sum_probs=36.0
Q ss_pred CceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCCh--hhHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNE--QDWMEVA 54 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~--~dW~~cL 54 (417)
.|++|..|.++|||+. | |++||+|++|||.+|.+. ++..+.+
T Consensus 36 ~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~ 81 (103)
T 1wfv_A 36 MDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELI 81 (103)
T ss_dssp EEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHH
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3899999999999998 8 999999999999999984 4444444
No 143
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.51 E-value=5.6e-05 Score=63.24 Aligned_cols=42 Identities=24% Similarity=0.302 Sum_probs=37.8
Q ss_pred ceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeec--CChhhHHHHHH
Q 042181 14 GTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHI--HNEQDWMEVAA 55 (417)
Q Consensus 14 Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V--~~~~dW~~cL~ 55 (417)
|++|..|.++|||+. | |++||+|++|||.+| .+.++..+.|.
T Consensus 43 ~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~ 88 (117)
T 1v62_A 43 VITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLA 88 (117)
T ss_dssp EEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHH
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 499999999999998 8 999999999999999 55777777774
No 144
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=97.50 E-value=8.2e-05 Score=62.58 Aligned_cols=44 Identities=18% Similarity=0.346 Sum_probs=38.2
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecC--ChhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIH--NEQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~--~~~dW~~cL~ 55 (417)
..|++|..|.++|||+. | |++||+|++|||.+|. +.+++.+.+.
T Consensus 44 ~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~ 91 (125)
T 3hpk_A 44 CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQ 91 (125)
T ss_dssp CSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 35799999999999998 8 9999999999999998 4566777664
No 145
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=97.48 E-value=5.9e-05 Score=66.19 Aligned_cols=43 Identities=23% Similarity=0.194 Sum_probs=39.0
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChhh-HHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQD-WMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~d-W~~cL 54 (417)
+.|++|..|.++|||+. ||++||+|++|||.+|.+.++ ....+
T Consensus 26 ~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~ 70 (166)
T 1w9e_A 26 DNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKV 70 (166)
T ss_dssp TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 68999999999999998 999999999999999999877 65555
No 146
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=97.48 E-value=6.6e-05 Score=61.16 Aligned_cols=43 Identities=21% Similarity=0.276 Sum_probs=36.9
Q ss_pred CceEEEEeCCCCCCCC-C--CCCCCeEEeeCCeecCCh--hhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-Y--LSPGDVIVSLDGIHIHNE--QDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-g--L~~GDvI~sINgc~V~~~--~dW~~cL~ 55 (417)
.|++|..|.++|||+. | |++||+|++|||.+|.+. +++...+.
T Consensus 43 ~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~ 90 (107)
T 3nfk_A 43 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIK 90 (107)
T ss_dssp EEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 5799999999999998 8 999999999999999964 45555553
No 147
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=97.47 E-value=4e-05 Score=64.53 Aligned_cols=43 Identities=16% Similarity=0.244 Sum_probs=39.4
Q ss_pred CceEEEEeCCCCCCCC-CC-CCCCeEEeeCCeecCC--hhhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-YL-SPGDVIVSLDGIHIHN--EQDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-gL-~~GDvI~sINgc~V~~--~~dW~~cL~ 55 (417)
.|++|..|.++|||+. || ++||+|++|||.+|.+ .+++.+.+.
T Consensus 33 ~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~ 79 (127)
T 1b8q_A 33 PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLR 79 (127)
T ss_dssp SCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHH
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3899999999999998 87 9999999999999999 888888874
No 148
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=97.46 E-value=8.8e-05 Score=63.26 Aligned_cols=44 Identities=16% Similarity=0.209 Sum_probs=36.6
Q ss_pred CCceEEEEeCCCCCCCC--CCCCCCeEEeeCCeecCChhhHHHHHHh
Q 042181 12 CEGTMVLDVPSTSPLSG--YLSPGDVIVSLDGIHIHNEQDWMEVAAL 56 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g--gL~~GDvI~sINgc~V~~~~dW~~cL~~ 56 (417)
+.|++|..|.++|||+. +|++||+|++|||.+|.+. +|.++...
T Consensus 56 ~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~-~~~~~~~~ 101 (130)
T 1i16_A 56 DKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGL-TRFEAWNI 101 (130)
T ss_dssp CCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGS-CHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCC-CHHHHHHH
Confidence 35799999999999995 8999999999999999884 34555443
No 149
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.46 E-value=7.7e-05 Score=64.46 Aligned_cols=45 Identities=13% Similarity=0.276 Sum_probs=39.7
Q ss_pred eCCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecC--ChhhHHHHHH
Q 042181 11 QCEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIH--NEQDWMEVAA 55 (417)
Q Consensus 11 ~g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~--~~~dW~~cL~ 55 (417)
.+.+++|..|.++|||+. | |++||+|++|||.+|. +.+++.+.|.
T Consensus 47 ~~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~ 95 (126)
T 1wif_A 47 NGPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQ 95 (126)
T ss_dssp ETTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHT
T ss_pred CCCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Confidence 367899999999999988 7 9999999999999996 6777877773
No 150
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.45 E-value=7e-05 Score=63.03 Aligned_cols=35 Identities=11% Similarity=0.273 Sum_probs=32.8
Q ss_pred CceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCCh
Q 042181 13 EGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNE 47 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~ 47 (417)
.|++|..|.++|||+. | |++||+|++|||.+|.+.
T Consensus 51 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~ 87 (124)
T 2daz_A 51 MSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGR 87 (124)
T ss_dssp CCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCC
Confidence 5999999999999998 7 999999999999999874
No 151
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=97.44 E-value=9.2e-05 Score=62.95 Aligned_cols=44 Identities=18% Similarity=0.199 Sum_probs=38.1
Q ss_pred CceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHHHh
Q 042181 13 EGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVAAL 56 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL~~ 56 (417)
.|++|..|.++|||+. | |++||+|++|||.+|.+ .++..+.|..
T Consensus 43 ~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~ 90 (129)
T 2kpk_A 43 EFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQS 90 (129)
T ss_dssp EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHH
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 4699999999999998 7 99999999999999985 4677777743
No 152
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=97.43 E-value=8.3e-05 Score=63.70 Aligned_cols=43 Identities=16% Similarity=0.260 Sum_probs=38.2
Q ss_pred ceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCCh--hhHHHHHHh
Q 042181 14 GTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNE--QDWMEVAAL 56 (417)
Q Consensus 14 Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~--~dW~~cL~~ 56 (417)
|++|..|.++|||+. | |++||+|++|||.+|.+. ++..+.|..
T Consensus 66 gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~ 112 (131)
T 1wfg_A 66 CAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILE 112 (131)
T ss_dssp EEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred CEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 899999999999998 8 999999999999999874 677777743
No 153
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.43 E-value=9.1e-05 Score=61.83 Aligned_cols=41 Identities=12% Similarity=0.266 Sum_probs=35.9
Q ss_pred ceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCCh--hhHHHHH
Q 042181 14 GTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNE--QDWMEVA 54 (417)
Q Consensus 14 Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~--~dW~~cL 54 (417)
|++|..|.++|||+. + |++||+|++|||.+|.+. ++..+.|
T Consensus 50 g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l 94 (117)
T 1ujd_A 50 GAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSII 94 (117)
T ss_dssp EEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Confidence 899999999999998 8 999999999999999873 5555555
No 154
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.42 E-value=8.2e-05 Score=61.15 Aligned_cols=43 Identities=19% Similarity=0.230 Sum_probs=36.6
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL 54 (417)
..|++|..|.++|||+. | |++||+|++|||.+|.+ .++..+.+
T Consensus 43 ~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 89 (108)
T 2d92_A 43 RSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEIL 89 (108)
T ss_dssp CEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 46899999999999998 7 99999999999999977 44444444
No 155
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=97.42 E-value=7.9e-05 Score=66.97 Aligned_cols=45 Identities=18% Similarity=0.288 Sum_probs=41.5
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHHHh
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVAAL 56 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL~~ 56 (417)
..|++|..|.++|||+. | |++||+|++|||.+|.+ .+++.+.|.+
T Consensus 134 ~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 182 (196)
T 1p1d_A 134 GDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQ 182 (196)
T ss_dssp TCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHH
T ss_pred CCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 47999999999999997 7 99999999999999999 8999998854
No 156
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=97.41 E-value=7e-05 Score=67.69 Aligned_cols=43 Identities=19% Similarity=0.299 Sum_probs=38.8
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCC--hhhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHN--EQDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~--~~dW~~cL 54 (417)
+.|++|..|.++|||+. ||++||+|++|||.+|.+ .+++.+.+
T Consensus 109 ~~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~l 154 (192)
T 3k1r_A 109 GCGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVINLI 154 (192)
T ss_dssp TEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHH
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 45899999999999998 899999999999999998 77777766
No 157
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=97.41 E-value=5.3e-05 Score=69.47 Aligned_cols=44 Identities=34% Similarity=0.434 Sum_probs=39.8
Q ss_pred CCceEEEEeCCCCCCCC-CCCCC-CeEEeeCCeecCChhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPG-DVIVSLDGIHIHNEQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~G-DvI~sINgc~V~~~~dW~~cL~ 55 (417)
..|++|.+|.++|||+. ||++| |+|++|||.+|.+.++....+.
T Consensus 15 ~~G~~V~~V~~~SpA~~AGL~~G~D~I~~ing~~v~~~~~~~~~~~ 60 (209)
T 3rle_A 15 TEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLL 60 (209)
T ss_dssp SEEEEEEEECTTSHHHHTTCCTTTEEEEEETTEECCSSSSHHHHHH
T ss_pred CCEEEEEEECCCCHHHHCCCCcCCeEEEEECCEECcCHHHHHHHHH
Confidence 57899999999999998 99999 9999999999999888766664
No 158
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.41 E-value=0.00011 Score=60.13 Aligned_cols=42 Identities=19% Similarity=0.311 Sum_probs=35.4
Q ss_pred CCceEEEEeCCCCCCCC--CCCCCCeEEeeCCeecCChhhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG--YLSPGDVIVSLDGIHIHNEQDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g--gL~~GDvI~sINgc~V~~~~dW~~cL 54 (417)
+.|++|..|.++|||+. +|++||+|++|||.+|.+. +|.+++
T Consensus 40 ~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~-~~~~~~ 83 (107)
T 1uhp_A 40 SEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRA-THDQAV 83 (107)
T ss_dssp SCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTC-CHHHHH
T ss_pred CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCC-CHHHHH
Confidence 67999999999999986 7999999999999999763 344444
No 159
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=97.38 E-value=0.00012 Score=62.30 Aligned_cols=43 Identities=14% Similarity=0.198 Sum_probs=37.4
Q ss_pred CceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL~ 55 (417)
.|++|..|.++|||+. | |++||+|++|||.+|.+ .++..+.|.
T Consensus 55 ~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 101 (127)
T 1wg6_A 55 LGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLR 101 (127)
T ss_dssp EEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4899999999999998 7 99999999999999988 346666664
No 160
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.35 E-value=0.00012 Score=60.63 Aligned_cols=43 Identities=16% Similarity=0.159 Sum_probs=37.5
Q ss_pred CceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL~ 55 (417)
.|++|..|.++|||+. | |++||.|++|||.++.+ .++..+.|.
T Consensus 41 ~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~ 87 (109)
T 1wi4_A 41 PLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIIT 87 (109)
T ss_dssp SSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHH
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4799999999999998 8 99999999999999998 556666664
No 161
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.35 E-value=5.4e-05 Score=61.43 Aligned_cols=36 Identities=19% Similarity=0.361 Sum_probs=33.1
Q ss_pred CCceEEEEeCCCCCCCC--CCCCCCeEEeeCCeecCCh
Q 042181 12 CEGTMVLDVPSTSPLSG--YLSPGDVIVSLDGIHIHNE 47 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g--gL~~GDvI~sINgc~V~~~ 47 (417)
+.|++|..|.++|||+. +|++||+|++|||.+|.+.
T Consensus 34 ~~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~ 71 (100)
T 2edp_A 34 CEPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS 71 (100)
T ss_dssp TEEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC
T ss_pred CCCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch
Confidence 35799999999999996 7999999999999999984
No 162
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=97.33 E-value=9.3e-05 Score=62.48 Aligned_cols=42 Identities=17% Similarity=0.132 Sum_probs=35.3
Q ss_pred CCceEEEEeCCCCCCCC--CCCCCCeEEeeCCeecCChhhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG--YLSPGDVIVSLDGIHIHNEQDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g--gL~~GDvI~sINgc~V~~~~dW~~cL 54 (417)
+.|++|..|.++|||+. +|++||+|++|||.+|.+. +|.++.
T Consensus 52 ~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~-~~~~~~ 95 (120)
T 2iwo_A 52 DVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGM-THTQAV 95 (120)
T ss_dssp EEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTC-BHHHHH
T ss_pred CCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCC-CHHHHH
Confidence 34899999999999984 8999999999999999884 344444
No 163
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=97.31 E-value=0.00014 Score=65.23 Aligned_cols=44 Identities=18% Similarity=0.152 Sum_probs=38.1
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCCh--hhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNE--QDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~--~dW~~cL~ 55 (417)
..|++|.+|.++|||+. | |++||+|++|||.+|.+. +++.+.+.
T Consensus 135 ~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 182 (206)
T 3r0h_A 135 EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFK 182 (206)
T ss_dssp SSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 46899999999999997 7 999999999999999964 56666663
No 164
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=97.29 E-value=9.3e-05 Score=65.10 Aligned_cols=37 Identities=8% Similarity=0.127 Sum_probs=34.0
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCChh
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNEQ 48 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~~ 48 (417)
+.|++|..|.|+|||+. | |++||+|++|||.+|.+.+
T Consensus 34 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~ 72 (196)
T 3gsl_A 34 DPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVT 72 (196)
T ss_dssp CCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCC
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCC
Confidence 56999999999999987 7 9999999999999999753
No 165
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=96.39 E-value=3.7e-05 Score=64.43 Aligned_cols=42 Identities=14% Similarity=0.406 Sum_probs=35.4
Q ss_pred CceEEEEeCCCCCCCC--CCCCCCeEEeeCCeecCC--hhhHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG--YLSPGDVIVSLDGIHIHN--EQDWMEVA 54 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g--gL~~GDvI~sINgc~V~~--~~dW~~cL 54 (417)
.|++|..|.++|||+. +|++||+|++|||.+|.+ .++..+.+
T Consensus 53 ~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l 98 (112)
T 2lob_A 53 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTIL 98 (112)
Confidence 5899999999999996 899999999999999965 44444444
No 166
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=97.28 E-value=0.00016 Score=64.81 Aligned_cols=44 Identities=23% Similarity=0.412 Sum_probs=40.7
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecC--ChhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIH--NEQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~--~~~dW~~cL~ 55 (417)
..|++|..|.++|||+. | |++||+|++|||.+|. +.+++.+.|.
T Consensus 134 ~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~ 181 (200)
T 2qt5_A 134 SRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILK 181 (200)
T ss_dssp CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 36999999999999998 8 9999999999999999 8899988885
No 167
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=97.26 E-value=0.00019 Score=72.90 Aligned_cols=43 Identities=23% Similarity=0.312 Sum_probs=40.9
Q ss_pred CceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChhhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~dW~~cL~ 55 (417)
.|++|.+|.++|||+. ||++||+|++|||.+|.+.+|+.+.+.
T Consensus 363 ~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~l~ 406 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSIAEMRKVLA 406 (436)
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHH
Confidence 5999999999999987 899999999999999999999999985
No 168
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.25 E-value=6.8e-05 Score=61.39 Aligned_cols=43 Identities=26% Similarity=0.352 Sum_probs=36.5
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCCh--hhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNE--QDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~--~dW~~cL 54 (417)
+.|++|..|.++|||+. + |++||+|++|||.+|.+. ++....+
T Consensus 38 ~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~ 84 (113)
T 1um7_A 38 GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAAL 84 (113)
T ss_dssp TCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 36899999999999998 7 999999999999999986 3444433
No 169
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.25 E-value=0.00011 Score=72.41 Aligned_cols=43 Identities=33% Similarity=0.629 Sum_probs=41.0
Q ss_pred CceEEEEeCCCCCCCC-CCCC-----------CCeEEeeCCeecCChhhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-YLSP-----------GDVIVSLDGIHIHNEQDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-gL~~-----------GDvI~sINgc~V~~~~dW~~cL~ 55 (417)
.|++|.+|.++|||+. ||++ ||+|++|||.+|.+.+|+.+.|.
T Consensus 251 ~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~~dl~~~l~ 305 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILD 305 (348)
T ss_dssp SSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSSHHHHHHHT
T ss_pred ceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCHHHHHHHHH
Confidence 7999999999999998 9999 99999999999999999999984
No 170
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=97.24 E-value=0.00019 Score=64.31 Aligned_cols=34 Identities=24% Similarity=0.326 Sum_probs=32.5
Q ss_pred CceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC
Q 042181 13 EGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN 46 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~ 46 (417)
.|++|..|.++|||+. | |++||+|++|||.+|.+
T Consensus 45 ~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~ 80 (206)
T 3r0h_A 45 TGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHV 80 (206)
T ss_dssp SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCG
T ss_pred CCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCC
Confidence 6999999999999987 6 99999999999999998
No 171
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=97.24 E-value=0.00012 Score=67.19 Aligned_cols=43 Identities=28% Similarity=0.390 Sum_probs=40.6
Q ss_pred CceEEEEeCCCCCCCC-CCCC-CCeEEeeCCeecCChhhHHHHHHh
Q 042181 13 EGTMVLDVPSTSPLSG-YLSP-GDVIVSLDGIHIHNEQDWMEVAAL 56 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-gL~~-GDvI~sINgc~V~~~~dW~~cL~~ 56 (417)
.|++|.+|.++|||+. ||++ ||+|++|||. |.+.+++.+.+..
T Consensus 112 ~Gv~V~~V~~~spA~~aGl~~~GD~I~~ing~-v~~~~~l~~~l~~ 156 (209)
T 3rle_A 112 NVWHVLEVESNSPAALAGLRPHSDYIIGADTV-MNESEDLFSLIET 156 (209)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTTEEEEEESSC-CCSSSCHHHHHHH
T ss_pred cceEEEEeCCCChHHHCCCCCCCCEEEECCCE-eCCHHHHHHHHHh
Confidence 7999999999999998 9999 9999999997 9999999999964
No 172
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=97.23 E-value=0.00023 Score=72.38 Aligned_cols=44 Identities=25% Similarity=0.297 Sum_probs=41.6
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~dW~~cL~ 55 (417)
..|++|.+|.++|||+. ||++||+|++|||.+|.+.+++...+.
T Consensus 262 ~~G~~V~~V~~~spA~~aGL~~GD~I~~vnG~~v~~~~~l~~~l~ 306 (436)
T 4a8c_A 262 QRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIA 306 (436)
T ss_pred CcceEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHHHHHHH
Confidence 48999999999999998 899999999999999999999998885
No 173
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.19 E-value=0.00046 Score=55.78 Aligned_cols=43 Identities=19% Similarity=0.260 Sum_probs=35.5
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCeEEeeCCeecCCh--hhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSGYLSPGDVIVSLDGIHIHNE--QDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~ggL~~GDvI~sINgc~V~~~--~dW~~cL~ 55 (417)
..|++|+.|.+. ++.++|++||+|++|||.+|.+. ++..+.|.
T Consensus 31 ~~Gv~V~~v~~~-a~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~ 75 (96)
T 1ujv_A 31 PTGQRVKQILDI-QGCPGLCEGDLIVEINQQNVQNLSHTEVVDILK 75 (96)
T ss_dssp TTEEEEEEESCG-GGSTTCCSSCEEEEETTEECSSCCHHHHHHHHH
T ss_pred CCCEEEEEEecc-cccCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 458999999984 55669999999999999999885 66666664
No 174
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.18 E-value=0.00017 Score=73.82 Aligned_cols=43 Identities=21% Similarity=0.299 Sum_probs=40.9
Q ss_pred CceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChhhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~dW~~cL~ 55 (417)
.|++|++|.++|||+. ||++||+|++|||.+|.+.+|+.+.|.
T Consensus 386 ~Gv~V~~V~~gspA~~aGL~~GD~I~~Vng~~v~~~~~~~~~l~ 429 (451)
T 3pv2_A 386 IGVQVVGASENSAGWRAGIRPGDIIISANKKPVTDVKSLQTIAQ 429 (451)
T ss_dssp EEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHTT
T ss_pred CceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHh
Confidence 5999999999999988 999999999999999999999999884
No 175
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.16 E-value=0.00023 Score=72.93 Aligned_cols=44 Identities=25% Similarity=0.390 Sum_probs=41.7
Q ss_pred CceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChhhHHHHHHh
Q 042181 13 EGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQDWMEVAAL 56 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~dW~~cL~~ 56 (417)
.|++|.+|.++|||++ ||++||+|++|||.+|.+.++....+..
T Consensus 282 ~G~~V~~V~~~spA~~aGL~~GDvI~~vnG~~v~~~~~l~~~l~~ 326 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTISL 326 (451)
T ss_dssp CCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHHT
T ss_pred ceEEEEecCCCChHHHcCCCCCCEEEEECCEEcCCHHHHHHHHHh
Confidence 7999999999999998 9999999999999999999999998853
No 176
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=97.14 E-value=0.00014 Score=68.08 Aligned_cols=43 Identities=23% Similarity=0.375 Sum_probs=39.9
Q ss_pred ceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecC--ChhhHHHHHHh
Q 042181 14 GTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIH--NEQDWMEVAAL 56 (417)
Q Consensus 14 Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~--~~~dW~~cL~~ 56 (417)
|++|..|.++|||+. ||++||+|++|||.+|. +.++..+.|..
T Consensus 34 gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~dl~~~l~~ 79 (216)
T 2krg_A 34 GQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRA 79 (216)
T ss_dssp SCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHHHHHHHHH
T ss_pred CeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 899999999999998 99999999999999999 88888888753
No 177
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=97.12 E-value=0.00025 Score=63.65 Aligned_cols=44 Identities=16% Similarity=0.281 Sum_probs=38.7
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL~ 55 (417)
..|++|..|.++|||+. | |++||+|++|||.+|.+ .++..+.|.
T Consensus 35 ~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~ 82 (196)
T 1p1d_A 35 SSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLR 82 (196)
T ss_dssp SCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 35799999999999997 8 99999999999999994 577777774
No 178
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.10 E-value=7.6e-05 Score=72.80 Aligned_cols=44 Identities=25% Similarity=0.453 Sum_probs=0.0
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~dW~~cL~ 55 (417)
..|++|.+|.++|||++ ||++||+|++|||.+|.+.+|+.+.+.
T Consensus 253 ~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~ 297 (332)
T 3num_A 253 ISGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSANDVSDVIK 297 (332)
T ss_dssp ---------------------------------------------
T ss_pred CCceEEEEeccCCChHHcCCCCCCEEEEECCEECCCHHHHHHHHh
Confidence 57999999999999998 899999999999999999888888773
No 179
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=97.07 E-value=0.00035 Score=62.65 Aligned_cols=44 Identities=16% Similarity=0.210 Sum_probs=39.0
Q ss_pred CCceEEEEeCCCCCCCC--CCCCCCeEEeeCCeecCCh--hhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG--YLSPGDVIVSLDGIHIHNE--QDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g--gL~~GDvI~sINgc~V~~~--~dW~~cL~ 55 (417)
..|++|..|.++|||+. +|++||+|++|||.+|.+. ++....+.
T Consensus 32 ~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~ 79 (200)
T 2qt5_A 32 DGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLK 79 (200)
T ss_dssp SSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred CCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 46799999999999994 8999999999999999987 77776663
No 180
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=97.01 E-value=0.00045 Score=62.17 Aligned_cols=44 Identities=18% Similarity=0.177 Sum_probs=37.1
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL~ 55 (417)
..|++|..|.++|||+. | |++||+|++|||.+|.+ .++..+.|.
T Consensus 110 ~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~ 157 (170)
T 3egg_C 110 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLR 157 (170)
T ss_dssp SBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHH
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 36899999999999998 8 99999999999999965 455555553
No 181
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.00 E-value=0.00048 Score=57.71 Aligned_cols=43 Identities=14% Similarity=0.118 Sum_probs=36.9
Q ss_pred ceEEEEeCCCCCCCC--CCCCCCeEEeeCCeecCC--hhhHHHHHHh
Q 042181 14 GTMVLDVPSTSPLSG--YLSPGDVIVSLDGIHIHN--EQDWMEVAAL 56 (417)
Q Consensus 14 Gv~V~~V~~~SPl~g--gL~~GDvI~sINgc~V~~--~~dW~~cL~~ 56 (417)
.++|..|.++|||+. +|++||.|++|||.+|.+ .++..+.|..
T Consensus 44 ~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~ 90 (118)
T 1v6b_A 44 KVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQK 90 (118)
T ss_dssp SEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHH
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHH
Confidence 399999999999985 899999999999999997 4566666643
No 182
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=96.99 E-value=0.00034 Score=74.31 Aligned_cols=43 Identities=28% Similarity=0.326 Sum_probs=39.9
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~dW~~cL~ 55 (417)
+.|++|.+|.++|||.+ ||++||+|++|||.+| +.+++.+.+.
T Consensus 495 ~~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v-~~~~l~~~l~ 538 (597)
T 4fgm_A 495 PQGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQA-TEQSVKRILE 538 (597)
T ss_dssp TTEEEEEEECTTSHHHHHTCCTTCEEEEETTEEC-CTTTHHHHHT
T ss_pred CCeEEEEEeCCCChHHHCCCCCCCEEEEECCEEC-CHHHHHHHHH
Confidence 66999999999999999 9999999999999999 5888998884
No 183
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=96.91 E-value=0.00049 Score=69.45 Aligned_cols=44 Identities=23% Similarity=0.304 Sum_probs=39.2
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCC--hhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHN--EQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~--~~dW~~cL~ 55 (417)
+.|++|..|.++|||+. ||++||+|++|||.+|.+ .++....|.
T Consensus 30 ~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~e~~~~l~ 76 (391)
T 3tsz_A 30 DVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLL 76 (391)
T ss_dssp TTEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 47999999999999998 899999999999999987 666666664
No 184
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=96.87 E-value=0.00038 Score=71.20 Aligned_cols=44 Identities=27% Similarity=0.298 Sum_probs=41.1
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~dW~~cL~ 55 (417)
..|++|.+|.++|||+. ||++||+|++|||.+|.+.++....+.
T Consensus 285 ~~G~~V~~V~~gspA~~AGL~~GDvI~~inG~~v~~~~~l~~~l~ 329 (448)
T 1ky9_A 285 QRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVG 329 (448)
T ss_dssp CCSEECCCCTTCSSSTTTTCCTTCEECBSSSSBCCSSHHHHHHTT
T ss_pred CCceEEEEeccCCHHHHcCCCCCCEEEEECCEEcCCHHHHHHHHH
Confidence 47999999999999998 999999999999999999999888874
No 185
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=96.82 E-value=0.001 Score=70.21 Aligned_cols=45 Identities=13% Similarity=0.147 Sum_probs=42.7
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChhhHHHHHHh
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQDWMEVAAL 56 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~dW~~cL~~ 56 (417)
.+||+|++|.++|++.+ ++.+||+|++|||.+|+|.+|+.+.|.+
T Consensus 414 ~~gVvvs~V~~~s~a~~~g~~~gdiI~~vNg~~V~s~~~l~~~l~~ 459 (539)
T 4fln_A 414 EQIVILSQVLANEVNIGYEDMNNQQVLKFNGIPIRNIHHLAHLIDM 459 (539)
T ss_dssp CCCEEEEEECCCGGGTTCSSCCSEEEEEETTEECCSHHHHHHHHHT
T ss_pred ceEEEEEEecCCchhhhcCCCCCCEEEeECCEEcCCHHHHHHHHHH
Confidence 56999999999999999 8999999999999999999999999964
No 186
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=96.79 E-value=0.00057 Score=56.13 Aligned_cols=42 Identities=14% Similarity=0.310 Sum_probs=35.9
Q ss_pred eEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHHHh
Q 042181 15 TMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVAAL 56 (417)
Q Consensus 15 v~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL~~ 56 (417)
++|..|.++|||+. + |++||.|++|||.++.+ .++..+.|.+
T Consensus 34 ~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 79 (103)
T 1ufx_A 34 PRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAE 79 (103)
T ss_dssp CEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHH
T ss_pred EEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHH
Confidence 58999999999998 7 99999999999999987 5556665643
No 187
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=96.72 E-value=0.00089 Score=66.79 Aligned_cols=43 Identities=26% Similarity=0.363 Sum_probs=38.5
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCCh--hhHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNE--QDWMEVA 54 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~--~dW~~cL 54 (417)
+.|++|..|.++|||+. ||++||+|++|||.+|.+. +++.+.+
T Consensus 98 ~~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v~~~~~~~~~~~l 143 (388)
T 1fc6_A 98 GKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLL 143 (388)
T ss_dssp SSCEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCcEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 47999999999999998 9999999999999999984 6676655
No 188
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=96.62 E-value=0.001 Score=70.22 Aligned_cols=38 Identities=45% Similarity=0.564 Sum_probs=35.0
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCeEEeeCCeecCChhh
Q 042181 12 CEGTMVLDVPSTSPLSGYLSPGDVIVSLDGIHIHNEQD 49 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~ggL~~GDvI~sINgc~V~~~~d 49 (417)
..|++|.+|.++|||+++|++||+|++|||.+|.+..+
T Consensus 276 ~~Gv~V~~V~~~spA~~al~~GDvI~~idg~~V~~~g~ 313 (539)
T 4fln_A 276 NEGVLVRRVEPTSDASKVLKEGDVIVSFDDLHVGCEGT 313 (539)
T ss_dssp SBCEEEEEECTTSGGGGTCCTTCEEEEETTEECBSSSE
T ss_pred cCceeeecccCCChHHhCccCCCEEEEECCEEeCcCCe
Confidence 57999999999999999999999999999999987544
No 189
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=96.61 E-value=0.0011 Score=68.72 Aligned_cols=45 Identities=22% Similarity=0.268 Sum_probs=40.4
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCC--hhhHHHHHHh
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHN--EQDWMEVAAL 56 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~--~~dW~~cL~~ 56 (417)
..|++|..|.++|||+. ||++||+|++|||.+|.+ .++....|..
T Consensus 22 ~~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~~e~~~~L~~ 69 (468)
T 3shw_A 22 DVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLD 69 (468)
T ss_dssp TTEEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHH
T ss_pred cCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 47999999999999998 899999999999999998 7777777753
No 190
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=96.50 E-value=0.00042 Score=70.91 Aligned_cols=44 Identities=25% Similarity=0.361 Sum_probs=0.0
Q ss_pred CCceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChhhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~dW~~cL~ 55 (417)
..|++|.+|.++|||+. ||++||+|++|||.+|.+.+++.+.|.
T Consensus 382 ~~gv~V~~V~~gspA~~aGL~~GDiI~~vng~~v~~~~~l~~~l~ 426 (448)
T 1ky9_A 382 DQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLD 426 (448)
T ss_dssp ---------------------------------------------
T ss_pred CCeEEEEEecCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHH
Confidence 57899999999999998 999999999999999999999988874
No 191
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=96.47 E-value=0.0014 Score=63.29 Aligned_cols=43 Identities=14% Similarity=0.196 Sum_probs=37.3
Q ss_pred CceEEEEeCCCCCCCC--CCCCCCeEEeeCCeecCCh--hhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG--YLSPGDVIVSLDGIHIHNE--QDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g--gL~~GDvI~sINgc~V~~~--~dW~~cL~ 55 (417)
.|++|..|.++|||+. +|++||+|++|||.+|.+. ++..+.|.
T Consensus 103 ~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~ 149 (263)
T 1z87_A 103 MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALK 149 (263)
T ss_dssp EEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHh
Confidence 5899999999999996 8999999999999999984 55555553
No 192
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=96.38 E-value=0.0016 Score=52.26 Aligned_cols=41 Identities=12% Similarity=0.205 Sum_probs=33.6
Q ss_pred CceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCCh--hhHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNE--QDWMEVA 54 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~--~dW~~cL 54 (417)
.|. |..|.++|||+. ||++||.|++|||..|.+. ++-.+.|
T Consensus 24 ~g~-I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~evv~ll 67 (82)
T 1r6j_A 24 NGK-ITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADIL 67 (82)
T ss_dssp TTE-EEEECTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHH
T ss_pred CCE-EEEecCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHH
Confidence 354 789999999999 9999999999999999764 3444444
No 193
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=96.26 E-value=0.0035 Score=67.61 Aligned_cols=45 Identities=22% Similarity=0.292 Sum_probs=39.7
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCC--hhhHHHHHHh
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHN--EQDWMEVAAL 56 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~--~~dW~~cL~~ 56 (417)
+.|++|..|.++|||+. | |++||+|++|||.+|.+ .++..+.|..
T Consensus 330 ~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~ 378 (721)
T 2xkx_A 330 GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKN 378 (721)
T ss_pred CCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 36999999999999987 7 99999999999999998 6777777743
No 194
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=96.09 E-value=0.0023 Score=55.96 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=31.7
Q ss_pred CceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChh
Q 042181 13 EGTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQ 48 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~ 48 (417)
.| +|..|.++|||+. ||++||+|++|||.+|.+..
T Consensus 108 ~g-~v~~v~~~s~a~~aGl~~GD~I~~ing~~v~~~~ 143 (166)
T 1w9e_A 108 NG-KITSIVKDSSAARNGLLTEHNICEINGQNVIGLK 143 (166)
T ss_dssp TT-EEEEECTTSHHHHTTCCSSEEEEEETTEECTTCC
T ss_pred CC-EEEEEccCCHHHHcCCCCCCEEEEECCEECCCCC
Confidence 45 8999999999998 89999999999999998853
No 195
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=95.91 E-value=0.0028 Score=64.36 Aligned_cols=35 Identities=23% Similarity=0.274 Sum_probs=32.3
Q ss_pred ceEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCChh
Q 042181 14 GTMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHNEQ 48 (417)
Q Consensus 14 Gv~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~~~ 48 (417)
.++|..|.++|||+. ||++||+|++|||.+|.+.+
T Consensus 91 ~~~V~~V~~gsPA~~AGL~~GD~I~~InG~~v~~~~ 126 (403)
T 3k50_A 91 NALISYVVPGSPAEEAGLQRGHWIMMMNGDYITKKV 126 (403)
T ss_dssp EEEEEEECTTSHHHHTTCCTTCEEEEETTBCBCTTT
T ss_pred eEEEEEeCCCChHHHcCCCCCCEEEEECCEEccchh
Confidence 489999999999999 99999999999999998763
No 196
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=95.79 E-value=0.0073 Score=65.10 Aligned_cols=44 Identities=14% Similarity=0.186 Sum_probs=38.0
Q ss_pred CCceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCCh--hhHHHHHH
Q 042181 12 CEGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNE--QDWMEVAA 55 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~--~dW~~cL~ 55 (417)
..|++|..|.++|||+. | |++||+|++|||.+|.+. ++....+.
T Consensus 183 ~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 230 (721)
T 2xkx_A 183 DNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALK 230 (721)
T ss_pred CCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHH
Confidence 46999999999999998 8 999999999999999985 45555553
No 197
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=95.70 E-value=0.0024 Score=64.11 Aligned_cols=43 Identities=19% Similarity=0.272 Sum_probs=37.6
Q ss_pred CceEEEEeCCCCCCCC-C-CCCCCeEEeeCCeecCCh--hhHHHHHH
Q 042181 13 EGTMVLDVPSTSPLSG-Y-LSPGDVIVSLDGIHIHNE--QDWMEVAA 55 (417)
Q Consensus 13 ~Gv~V~~V~~~SPl~g-g-L~~GDvI~sINgc~V~~~--~dW~~cL~ 55 (417)
.|++|..|.++|||+. | |++||+|++|||.+|.+. ++..+.+.
T Consensus 232 ~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~ 278 (388)
T 3suz_A 232 PTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIK 278 (388)
T ss_dssp CCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTT
T ss_pred CCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHH
Confidence 3589999999999998 7 999999999999999876 67777663
No 198
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=94.73 E-value=0.0053 Score=61.55 Aligned_cols=41 Identities=7% Similarity=0.164 Sum_probs=0.0
Q ss_pred eEEEEeCCCCCCCC-CCCCCCeEEeeCCeecCC--hhhHHHHHH
Q 042181 15 TMVLDVPSTSPLSG-YLSPGDVIVSLDGIHIHN--EQDWMEVAA 55 (417)
Q Consensus 15 v~V~~V~~~SPl~g-gL~~GDvI~sINgc~V~~--~~dW~~cL~ 55 (417)
.+|.+|.++|||+. ||++||+|++|||.+|.+ .+++.+.|.
T Consensus 317 g~I~~V~~gs~A~~aGL~~GD~Il~VNg~~v~~~s~~~~~~~l~ 360 (388)
T 3suz_A 317 GIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALS 360 (388)
T ss_dssp --------------------------------------------
T ss_pred CEEEEeecCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 37889999999988 899999999999999975 466666663
No 199
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=94.50 E-value=0.059 Score=45.77 Aligned_cols=44 Identities=20% Similarity=0.177 Sum_probs=34.3
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCeEEeeCCeecCCh--hhHHHHHHh
Q 042181 12 CEGTMVLDVPSTSPLSGYLSPGDVIVSLDGIHIHNE--QDWMEVAAL 56 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~ggL~~GDvI~sINgc~V~~~--~dW~~cL~~ 56 (417)
..|..|..|.+. ...++|++||+|++|||.+|.+. ++..+.|..
T Consensus 33 ~~g~~V~~I~~~-~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~ 78 (113)
T 3soe_A 33 PTGQKVKMILDS-QWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQ 78 (113)
T ss_dssp TTEEEEEEESCG-GGSTTCCTTCEEEEETTEECTTSCHHHHHHHHHH
T ss_pred CCCcEEEEecCh-HHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 457788888872 23349999999999999999964 577777754
No 200
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=94.34 E-value=0.022 Score=47.27 Aligned_cols=43 Identities=16% Similarity=0.185 Sum_probs=36.8
Q ss_pred ceEEEEeCCCCCCCC--CCCCCCeEEeeCCeecCC--hhhHHHHHHh
Q 042181 14 GTMVLDVPSTSPLSG--YLSPGDVIVSLDGIHIHN--EQDWMEVAAL 56 (417)
Q Consensus 14 Gv~V~~V~~~SPl~g--gL~~GDvI~sINgc~V~~--~~dW~~cL~~ 56 (417)
.+.|..|.++||++. .|.+||.|.+|||..|.+ .++-.+.|.+
T Consensus 29 ~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~ 75 (95)
T 3gge_A 29 YAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKE 75 (95)
T ss_dssp CCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred cEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHh
Confidence 367999999999987 599999999999999976 5677777754
No 201
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=94.24 E-value=0.037 Score=60.43 Aligned_cols=44 Identities=18% Similarity=0.212 Sum_probs=39.4
Q ss_pred eCCceEEEEeCCC--------CCCCC-C--CCCCCeEEeeCCeecCChhhHHHHHH
Q 042181 11 QCEGTMVLDVPST--------SPLSG-Y--LSPGDVIVSLDGIHIHNEQDWMEVAA 55 (417)
Q Consensus 11 ~g~Gv~V~~V~~~--------SPl~g-g--L~~GDvI~sINgc~V~~~~dW~~cL~ 55 (417)
.+.|++|..|.++ |||+. | |+ ||+|++|||.+|.+..+..+.|.
T Consensus 746 ~~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~~~~~~~~ 800 (1045)
T 1k32_A 746 DGDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGSNIYRVLS 800 (1045)
T ss_dssp ETTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTBCHHHHHH
T ss_pred eCCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchhhHHHhhc
Confidence 3789999999998 99998 8 99 99999999999999888877774
No 202
>3b4r_A Putative zinc metalloprotease MJ0392; intramembrane protease, CBS domain, hydrolase, metal-binding, transmembrane; 3.30A {Methanocaldococcus jannaschii}
Probab=93.98 E-value=0.044 Score=51.46 Aligned_cols=36 Identities=28% Similarity=0.390 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHccccccccchHHHHHHHHHH
Q 042181 259 KSLICIFHVSLTLALLNSLPAYFLDGESIFEVTLCF 294 (417)
Q Consensus 259 ~fl~YL~slSlALAllN~LPcy~LDGq~IL~tlL~~ 294 (417)
.++.++..+.+.+|++|++|++-|||.+|+++++..
T Consensus 124 ~~~~~~~~iNl~l~~fNLlPi~PLDGgril~~ll~~ 159 (224)
T 3b4r_A 124 PLLYTLSLLNLMLGGFNLIPAFPMDGGRILRAILSK 159 (224)
T ss_dssp EHHHHHHHHHHHHHHHTTSSSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCCCCCCHHHHHHHHhcc
Confidence 356778889999999999999999999999999976
No 203
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1
Probab=33.34 E-value=23 Score=37.11 Aligned_cols=33 Identities=27% Similarity=0.373 Sum_probs=26.6
Q ss_pred EEEEeCCCCCCCCCCCCCCeEEeeCCee--cCChh
Q 042181 16 MVLDVPSTSPLSGYLSPGDVIVSLDGIH--IHNEQ 48 (417)
Q Consensus 16 ~V~~V~~~SPl~ggL~~GDvI~sINgc~--V~~~~ 48 (417)
.|....+|.|-..-.+|||||++.||.. |.|++
T Consensus 318 ~~i~~~ENm~sg~A~rPgDVits~~GkTVEV~NTD 352 (503)
T 1gyt_A 318 GVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTD 352 (503)
T ss_dssp EEEEEEEECCSTTCCCTTCEEECTTSCEEECSCTT
T ss_pred EEEEeeccCCCCCCCCCCCEEEeCCCcEEEecCCC
Confidence 4667788888888899999999999965 45653
No 204
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A*
Probab=29.99 E-value=25 Score=36.74 Aligned_cols=33 Identities=21% Similarity=0.314 Sum_probs=26.8
Q ss_pred EEEEeCCCCCCCCCCCCCCeEEeeCCee--cCChh
Q 042181 16 MVLDVPSTSPLSGYLSPGDVIVSLDGIH--IHNEQ 48 (417)
Q Consensus 16 ~V~~V~~~SPl~ggL~~GDvI~sINgc~--V~~~~ 48 (417)
.|....+|+|-..-.+|||||++-||.. |.|++
T Consensus 298 ~~i~~~ENm~sg~A~rPgDVits~~GkTVEV~NTD 332 (484)
T 1lam_A 298 GLAPLCENMPSGKANKPGDVVRARNGKTIQVDNTD 332 (484)
T ss_dssp EEEEEEEECCSTTSCCTTEEEECTTSCEEEESCTT
T ss_pred EEEEeeccCCCCCCCCCCCEEEeCCCcEEEeecCC
Confidence 4667788998888899999999999955 55653
No 205
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}
Probab=29.55 E-value=29 Score=36.26 Aligned_cols=33 Identities=21% Similarity=0.271 Sum_probs=26.9
Q ss_pred EEEEeCCCCCCCCCCCCCCeEEeeCCee--cCChh
Q 042181 16 MVLDVPSTSPLSGYLSPGDVIVSLDGIH--IHNEQ 48 (417)
Q Consensus 16 ~V~~V~~~SPl~ggL~~GDvI~sINgc~--V~~~~ 48 (417)
.|....+|.|-..-.+|||||++.||.. |.|++
T Consensus 298 ~ii~~~ENm~sg~A~rPgDVits~~GkTVEV~NTD 332 (482)
T 3ij3_A 298 LLIPAVENAIGSRSYRPGDVVQTRARKTIEITNTD 332 (482)
T ss_dssp EEEEEEEECCSTTCCCTTCEEECTTSCEEECSCTT
T ss_pred EEEEeeccCCCCCCCCCCCEEEeCCCCEEEEecCC
Confidence 4677788888888899999999999966 55653
No 206
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV}
Probab=29.50 E-value=29 Score=36.30 Aligned_cols=33 Identities=27% Similarity=0.355 Sum_probs=26.7
Q ss_pred EEEEeCCCCCCCCCCCCCCeEEeeCCeec--CChh
Q 042181 16 MVLDVPSTSPLSGYLSPGDVIVSLDGIHI--HNEQ 48 (417)
Q Consensus 16 ~V~~V~~~SPl~ggL~~GDvI~sINgc~V--~~~~ 48 (417)
.|....+|.|-..-.+|||||++.||..| .|++
T Consensus 310 ~~i~~~ENm~sg~A~rPgDVit~~~G~TVEV~NTD 344 (490)
T 3jru_B 310 VVVPAVENAIDGNAYRPSDVITSMSGKTIEVGNTD 344 (490)
T ss_dssp EEEEEEEECCSTTCCCTTCEEECTTSCEEECSCTT
T ss_pred EEEEeeccCCCCCCCCCCCEEEecCCcEEEecCCC
Confidence 46677888888888999999999999655 5653
No 207
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp}
Probab=29.05 E-value=27 Score=36.54 Aligned_cols=34 Identities=26% Similarity=0.452 Sum_probs=22.3
Q ss_pred EEEEeCCCCCCCCCCCCCCeEEeeCCe--ecCChhh
Q 042181 16 MVLDVPSTSPLSGYLSPGDVIVSLDGI--HIHNEQD 49 (417)
Q Consensus 16 ~V~~V~~~SPl~ggL~~GDvI~sINgc--~V~~~~d 49 (417)
.|....+|.|-..-.+|||||++.||. +|.|++.
T Consensus 299 ~~i~~~ENm~sg~A~rPgDVits~~G~TVEV~NTDA 334 (486)
T 3pei_A 299 GVMGLAENAVDARSYRPGDVLKSMKGITVEVSNTDA 334 (486)
T ss_dssp EEEEEEEC------CCTTEEEECTTCCEEEECCGGG
T ss_pred EEEEeeccCCCCCCCCCCCEEEeCCCcEEEEeccCc
Confidence 466778888888889999999999995 5557653
No 208
>2xpn_B SPT6, chromatin structure modulator; transcription, elongation, histone chaperone, RNA polymerase mRNA export; 1.95A {Encephalitozoon cuniculi} PDB: 2xpo_B
Probab=28.93 E-value=23 Score=22.76 Aligned_cols=13 Identities=62% Similarity=1.048 Sum_probs=11.3
Q ss_pred ceeeeEEeecccc
Q 042181 386 SHVSFEILGFGED 398 (417)
Q Consensus 386 ~~~~~~~~~~~~~ 398 (417)
||.-|||.|.|+.
T Consensus 2 ~slFyEIFGtG~E 14 (26)
T 2xpn_B 2 SHMFFEIFGTGEE 14 (26)
T ss_pred CcEEEEEecCCce
Confidence 6788999999986
No 209
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=28.50 E-value=57 Score=34.87 Aligned_cols=31 Identities=19% Similarity=0.320 Sum_probs=23.1
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCeEEeeCCeecC
Q 042181 12 CEGTMVLDVPSTSPLSGYLSPGDVIVSLDGIHIH 45 (417)
Q Consensus 12 g~Gv~V~~V~~~SPl~ggL~~GDvI~sINgc~V~ 45 (417)
+.-++|+++..... .+.+||.|++|||.++.
T Consensus 95 DG~i~V~dv~~~~s---~I~vGdEIlsING~pv~ 125 (583)
T 3dor_A 95 DGRFYFVDIMTFSS---EIRVGDELLEVDGAPVQ 125 (583)
T ss_dssp TSCEEEEEECSSCC---SSCTTCEEEEETTEEHH
T ss_pred CCcEEEEecccccc---CCCCCCEEEEECCccHH
Confidence 44466777643322 69999999999999985
No 210
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}
Probab=28.03 E-value=32 Score=36.27 Aligned_cols=33 Identities=24% Similarity=0.322 Sum_probs=26.7
Q ss_pred EEEEeCCCCCCCCCCCCCCeEEeeCCeec--CChh
Q 042181 16 MVLDVPSTSPLSGYLSPGDVIVSLDGIHI--HNEQ 48 (417)
Q Consensus 16 ~V~~V~~~SPl~ggL~~GDvI~sINgc~V--~~~~ 48 (417)
.|....+|.|-..-.+|||||++.||..| .|++
T Consensus 331 ~~i~~~ENm~sg~A~rPgDVits~~GkTVEV~NTD 365 (515)
T 3kzw_A 331 GVLACAENMINEASMKPDDVFTALSGETVEVMNTD 365 (515)
T ss_dssp EEEEEEEECCCTTCCCTTCEEECTTSCEEECSCTT
T ss_pred EEEEeeccCCCCCCCCCCCEEEeCCCCEEEecCCC
Confidence 46677888888888999999999999655 5653
No 211
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=27.71 E-value=29 Score=36.43 Aligned_cols=33 Identities=27% Similarity=0.546 Sum_probs=26.6
Q ss_pred EEEEeCCCCCCCCCCCCCCeEEeeCCee--cCChh
Q 042181 16 MVLDVPSTSPLSGYLSPGDVIVSLDGIH--IHNEQ 48 (417)
Q Consensus 16 ~V~~V~~~SPl~ggL~~GDvI~sINgc~--V~~~~ 48 (417)
.|....+|+|-..-.+|||||++.||.. |.|++
T Consensus 315 ~~i~~~ENm~~g~A~rPgDVit~~~G~TVEV~NTD 349 (497)
T 3h8g_F 315 CLLACAENMPSGGATRPGDIVTTMSGQTVEILNTD 349 (497)
T ss_dssp EEEEEEEECCSTTSCCTTEEEECTTSCEEEESCTT
T ss_pred EEEEeeccCCCCCCCCCCCEEEeCCCcEEEecCCC
Confidence 4667788888888899999999999965 55653
No 212
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A
Probab=27.58 E-value=33 Score=35.97 Aligned_cols=32 Identities=22% Similarity=0.241 Sum_probs=26.6
Q ss_pred EEEEeCCCCCCCCCCCCCCeEEeeCCeec--CCh
Q 042181 16 MVLDVPSTSPLSGYLSPGDVIVSLDGIHI--HNE 47 (417)
Q Consensus 16 ~V~~V~~~SPl~ggL~~GDvI~sINgc~V--~~~ 47 (417)
.|....+|+|-..-.+|||||++-||..| .|+
T Consensus 300 ~~l~~~ENm~sg~A~rPgDVits~~GkTVEV~NT 333 (491)
T 2hc9_A 300 ACLCIVENNVSPIANKPDDIIKMLSGKTVEINNT 333 (491)
T ss_dssp EEEEEEEECCSTTSCCTTCEEECTTSCEEECSCT
T ss_pred EEEEeeecCCCCCCCCCCCEEEeCCCcEEEEecC
Confidence 46778889988888999999999999655 564
No 213
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei}
Probab=25.03 E-value=38 Score=35.76 Aligned_cols=33 Identities=18% Similarity=0.155 Sum_probs=26.1
Q ss_pred EEEEeCCCCCCCCCCCCCCeEEeeCCeec--CChh
Q 042181 16 MVLDVPSTSPLSGYLSPGDVIVSLDGIHI--HNEQ 48 (417)
Q Consensus 16 ~V~~V~~~SPl~ggL~~GDvI~sINgc~V--~~~~ 48 (417)
.|....+|.|-..-.+|||||++.||..| .|++
T Consensus 338 ~vl~~~ENm~sg~A~rPgDVits~~GkTVEV~NTD 372 (522)
T 4efd_A 338 CTLCLAENAIGPKSYRNDDIIVMKSGKTVEVINTD 372 (522)
T ss_dssp EEEEEEECCC-CCSTTTTEEEECTTSCEEEESCTT
T ss_pred EEEEEeccCCCCCCCCCCCEEEecCCcEEEeccCC
Confidence 46677889988888999999999999654 6653
No 214
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A*
Probab=24.09 E-value=41 Score=35.55 Aligned_cols=33 Identities=21% Similarity=0.333 Sum_probs=26.5
Q ss_pred EEEEeCCCCCCCCCCCCCCeEEeeCCee--cCChh
Q 042181 16 MVLDVPSTSPLSGYLSPGDVIVSLDGIH--IHNEQ 48 (417)
Q Consensus 16 ~V~~V~~~SPl~ggL~~GDvI~sINgc~--V~~~~ 48 (417)
.|....+|.|-..-.+|||||++.||.. |.|++
T Consensus 342 ~vi~~~ENm~sg~A~rPgDVit~~~GkTVEV~NTD 376 (528)
T 3kr4_A 342 FLSAVCENMVSKNSYRPGDIITASNGKTIEVGNTD 376 (528)
T ss_dssp EEEEEEEECCSTTSCCTTCEEECTTSCEEECSCTT
T ss_pred EEEEeeccCCCCCCCCCCCEEEeCCCcEEEEecCC
Confidence 4666778888777899999999999965 56653
Done!