Query 042183
Match_columns 179
No_of_seqs 137 out of 2116
Neff 10.5
Searched_HMMs 46136
Date Fri Mar 29 03:38:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042183.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042183hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4412 26S proteasome regulat 100.0 1.7E-27 3.6E-32 157.7 10.7 128 30-177 72-199 (226)
2 KOG4412 26S proteasome regulat 99.9 4.1E-27 8.9E-32 155.9 8.0 130 29-178 37-167 (226)
3 PHA02791 ankyrin-like protein; 99.9 6.9E-25 1.5E-29 160.5 15.9 140 30-178 61-222 (284)
4 PHA02791 ankyrin-like protein; 99.9 1.6E-24 3.4E-29 158.6 16.1 114 32-175 130-245 (284)
5 PHA02875 ankyrin repeat protei 99.9 5.3E-24 1.2E-28 164.6 16.4 128 30-177 68-195 (413)
6 PHA02743 Viral ankyrin protein 99.9 6.5E-24 1.4E-28 144.7 14.8 131 30-177 20-155 (166)
7 PHA02875 ankyrin repeat protei 99.9 3.5E-23 7.5E-28 160.1 15.5 128 29-177 101-229 (413)
8 PHA02741 hypothetical protein; 99.9 3.4E-23 7.4E-28 141.7 13.4 132 28-174 19-156 (169)
9 PHA02859 ankyrin repeat protei 99.9 1.3E-22 2.7E-27 143.3 15.6 130 28-178 49-187 (209)
10 PHA02878 ankyrin repeat protei 99.9 6.1E-23 1.3E-27 161.3 15.3 140 30-178 37-229 (477)
11 KOG0509 Ankyrin repeat and DHH 99.9 1.5E-23 3.3E-28 161.6 11.3 128 32-179 46-174 (600)
12 KOG0509 Ankyrin repeat and DHH 99.9 1.4E-23 3E-28 161.8 10.9 129 28-177 76-205 (600)
13 PHA02736 Viral ankyrin protein 99.9 2.5E-23 5.5E-28 140.3 11.0 134 28-177 15-153 (154)
14 PHA02874 ankyrin repeat protei 99.9 1E-22 2.2E-27 158.4 15.3 142 27-177 32-184 (434)
15 PHA02874 ankyrin repeat protei 99.9 3.1E-22 6.8E-27 155.7 17.4 135 29-178 67-218 (434)
16 PLN03192 Voltage-dependent pot 99.9 1.4E-22 3.1E-27 167.9 16.3 129 29-178 524-683 (823)
17 PHA02859 ankyrin repeat protei 99.9 2.5E-22 5.4E-27 141.8 14.5 128 28-178 19-153 (209)
18 KOG0512 Fetal globin-inducing 99.9 9E-23 1.9E-27 134.5 10.5 123 31-172 64-186 (228)
19 PHA02878 ankyrin repeat protei 99.9 4.5E-22 9.7E-27 156.5 15.8 126 30-178 168-295 (477)
20 PHA03100 ankyrin repeat protei 99.9 5.2E-22 1.1E-26 156.2 15.9 141 28-177 139-310 (480)
21 KOG0508 Ankyrin repeat protein 99.9 9.9E-23 2.1E-27 152.5 8.8 125 30-175 84-208 (615)
22 KOG0510 Ankyrin repeat protein 99.9 3.1E-22 6.6E-27 157.9 11.6 151 25-177 220-404 (929)
23 PHA03100 ankyrin repeat protei 99.9 1.3E-21 2.7E-26 154.0 14.8 126 31-177 69-203 (480)
24 PHA02884 ankyrin repeat protei 99.9 2.6E-21 5.5E-26 142.0 15.1 126 27-173 30-160 (300)
25 KOG0510 Ankyrin repeat protein 99.9 7E-22 1.5E-26 155.9 11.3 109 32-155 308-416 (929)
26 PHA02716 CPXV016; CPX019; EVM0 99.9 4.5E-21 9.7E-26 154.9 15.5 69 109-178 311-394 (764)
27 PHA02795 ankyrin-like protein; 99.9 5.1E-21 1.1E-25 145.8 13.6 138 30-178 116-290 (437)
28 PHA02798 ankyrin-like protein; 99.9 6.3E-21 1.4E-25 150.4 13.9 141 28-177 107-318 (489)
29 PHA02716 CPXV016; CPX019; EVM0 99.9 9.6E-21 2.1E-25 153.0 14.9 131 28-178 175-347 (764)
30 PHA03095 ankyrin-like protein; 99.9 1.5E-20 3.3E-25 147.6 15.7 129 28-177 45-181 (471)
31 KOG0508 Ankyrin repeat protein 99.9 1.7E-21 3.6E-26 146.0 8.6 121 30-172 117-237 (615)
32 PHA02946 ankyin-like protein; 99.9 2.2E-20 4.9E-25 145.3 15.1 141 28-178 70-237 (446)
33 PHA02946 ankyin-like protein; 99.9 2.2E-20 4.7E-25 145.3 14.9 126 31-177 38-167 (446)
34 PHA02876 ankyrin repeat protei 99.9 3.8E-20 8.2E-25 151.2 16.0 106 58-178 364-471 (682)
35 PHA03095 ankyrin-like protein; 99.8 1.8E-20 3.9E-25 147.1 13.5 124 34-178 18-147 (471)
36 PF12796 Ank_2: Ankyrin repeat 99.8 2.2E-20 4.7E-25 114.6 10.8 88 74-179 1-88 (89)
37 PHA02795 ankyrin-like protein; 99.8 6.8E-20 1.5E-24 139.7 14.3 111 65-178 112-249 (437)
38 PHA02989 ankyrin repeat protei 99.8 4.7E-20 1E-24 145.6 13.9 66 108-175 249-314 (494)
39 KOG4177 Ankyrin [Cell wall/mem 99.8 3E-20 6.5E-25 153.5 11.6 134 27-175 471-631 (1143)
40 PHA02798 ankyrin-like protein; 99.8 7.3E-20 1.6E-24 144.3 13.0 125 32-177 38-175 (489)
41 KOG0502 Integral membrane anky 99.8 2.4E-20 5.2E-25 127.5 8.0 124 31-177 130-253 (296)
42 PHA02989 ankyrin repeat protei 99.8 1.7E-19 3.7E-24 142.4 14.1 128 31-178 70-213 (494)
43 KOG4177 Ankyrin [Cell wall/mem 99.8 3.1E-20 6.8E-25 153.4 9.8 140 30-178 440-601 (1143)
44 PHA02876 ankyrin repeat protei 99.8 4E-19 8.6E-24 145.2 16.1 140 29-177 272-436 (682)
45 PF12796 Ank_2: Ankyrin repeat 99.8 1.8E-19 3.9E-24 110.5 10.7 89 34-146 1-89 (89)
46 KOG0514 Ankyrin repeat protein 99.8 6.7E-20 1.4E-24 133.5 8.2 131 25-172 263-429 (452)
47 PHA02741 hypothetical protein; 99.8 6.6E-19 1.4E-23 120.5 12.2 108 62-178 14-127 (169)
48 PHA02884 ankyrin repeat protei 99.8 6.7E-19 1.5E-23 129.3 12.7 103 62-178 25-132 (300)
49 PHA02917 ankyrin-like protein; 99.8 8.8E-19 1.9E-23 141.6 14.2 135 32-176 105-256 (661)
50 PHA02917 ankyrin-like protein; 99.8 2.8E-18 6E-23 138.7 13.7 127 29-178 31-166 (661)
51 KOG0502 Integral membrane anky 99.8 6.7E-19 1.4E-23 120.5 8.0 123 28-172 158-280 (296)
52 cd00204 ANK ankyrin repeats; 99.8 3.1E-17 6.7E-22 106.0 14.5 121 29-170 6-126 (126)
53 PHA02730 ankyrin-like protein; 99.8 7.9E-18 1.7E-22 134.2 13.0 127 30-177 378-525 (672)
54 KOG0505 Myosin phosphatase, re 99.8 2.1E-18 4.6E-23 131.0 9.1 145 24-177 67-258 (527)
55 KOG0195 Integrin-linked kinase 99.8 4.6E-18 1E-22 120.9 9.9 141 16-177 17-160 (448)
56 KOG0195 Integrin-linked kinase 99.8 6.2E-19 1.4E-23 125.3 4.9 124 34-177 4-127 (448)
57 PHA02743 Viral ankyrin protein 99.8 9.9E-18 2.1E-22 114.3 10.6 103 61-178 12-123 (166)
58 KOG4214 Myotrophin and similar 99.8 1.3E-17 2.9E-22 99.1 9.5 104 32-156 4-107 (117)
59 PHA02730 ankyrin-like protein; 99.8 2.1E-17 4.5E-22 131.8 13.0 131 29-177 40-182 (672)
60 PHA02736 Viral ankyrin protein 99.7 1.7E-17 3.7E-22 111.9 9.1 108 61-178 9-121 (154)
61 TIGR00870 trp transient-recept 99.7 6E-17 1.3E-21 133.6 13.9 142 29-178 16-203 (743)
62 PHA02792 ankyrin-like protein; 99.7 1.3E-16 2.9E-21 126.2 13.3 127 31-177 340-480 (631)
63 PLN03192 Voltage-dependent pot 99.7 1.5E-16 3.2E-21 132.3 13.4 130 26-164 554-703 (823)
64 KOG0507 CASK-interacting adapt 99.7 1.4E-17 3.1E-22 131.0 6.2 120 32-172 51-170 (854)
65 KOG0514 Ankyrin repeat protein 99.7 1.2E-17 2.6E-22 121.9 4.9 110 61-173 260-396 (452)
66 PHA02792 ankyrin-like protein; 99.7 1.2E-16 2.6E-21 126.5 10.4 138 26-172 67-239 (631)
67 KOG0512 Fetal globin-inducing 99.7 8.6E-17 1.9E-21 106.5 8.0 93 73-178 66-158 (228)
68 COG0666 Arp FOG: Ankyrin repea 99.7 1.2E-15 2.6E-20 108.2 13.3 123 30-173 73-203 (235)
69 KOG0515 p53-interacting protei 99.7 1.6E-16 3.4E-21 121.0 8.5 119 34-171 554-673 (752)
70 cd00204 ANK ankyrin repeats; 99.7 1.8E-15 4E-20 97.6 12.1 97 65-176 3-99 (126)
71 KOG0507 CASK-interacting adapt 99.7 1.3E-16 2.9E-21 125.6 7.6 106 58-178 38-143 (854)
72 TIGR00870 trp transient-recept 99.7 2.9E-16 6.2E-21 129.6 9.5 124 29-172 127-279 (743)
73 KOG4214 Myotrophin and similar 99.7 4.5E-16 9.7E-21 92.6 7.5 90 73-177 5-94 (117)
74 KOG0505 Myosin phosphatase, re 99.7 4.5E-16 9.9E-21 118.5 9.0 127 32-178 42-226 (527)
75 KOG1710 MYND Zn-finger and ank 99.7 2.5E-15 5.4E-20 106.9 11.3 121 30-170 12-132 (396)
76 PF13637 Ank_4: Ankyrin repeat 99.6 3.4E-15 7.5E-20 82.7 6.6 54 115-170 1-54 (54)
77 PTZ00322 6-phosphofructo-2-kin 99.6 9.9E-15 2.1E-19 118.7 11.7 86 73-172 85-170 (664)
78 KOG3676 Ca2+-permeable cation 99.6 1E-14 2.2E-19 116.0 11.2 129 30-173 184-331 (782)
79 PF13637 Ank_4: Ankyrin repeat 99.6 5.6E-15 1.2E-19 81.9 6.8 54 69-135 1-54 (54)
80 PTZ00322 6-phosphofructo-2-kin 99.6 1.2E-14 2.6E-19 118.2 11.5 106 32-157 84-196 (664)
81 PF13857 Ank_5: Ankyrin repeat 99.6 3.5E-15 7.6E-20 83.2 4.5 47 109-156 10-56 (56)
82 KOG0515 p53-interacting protei 99.5 4.9E-14 1.1E-18 107.6 8.7 89 74-176 554-642 (752)
83 KOG3676 Ca2+-permeable cation 99.5 6.3E-14 1.4E-18 111.6 9.3 138 30-175 143-298 (782)
84 COG0666 Arp FOG: Ankyrin repea 99.5 4E-13 8.7E-18 95.2 11.7 103 62-178 66-175 (235)
85 PF13857 Ank_5: Ankyrin repeat 99.5 4.5E-14 9.7E-19 78.7 4.4 53 57-122 4-56 (56)
86 KOG4369 RTK signaling protein 99.4 1.7E-13 3.6E-18 112.5 5.1 135 25-179 752-886 (2131)
87 KOG1710 MYND Zn-finger and ank 99.3 3.5E-11 7.5E-16 86.1 9.5 94 70-177 13-106 (396)
88 KOG0782 Predicted diacylglycer 99.2 7.8E-11 1.7E-15 91.3 10.4 122 32-172 868-989 (1004)
89 KOG0783 Uncharacterized conser 99.2 7E-12 1.5E-16 100.5 4.0 89 56-158 39-128 (1267)
90 KOG4369 RTK signaling protein 99.1 7.3E-11 1.6E-15 97.5 5.3 126 32-177 792-919 (2131)
91 PF13606 Ank_3: Ankyrin repeat 99.1 2.6E-10 5.6E-15 54.8 3.9 28 149-177 2-29 (30)
92 PF13606 Ank_3: Ankyrin repeat 99.0 4.1E-10 9E-15 54.1 3.8 29 114-142 1-29 (30)
93 KOG0506 Glutaminase (contains 99.0 3.9E-10 8.5E-15 85.6 5.5 92 66-172 503-595 (622)
94 KOG0818 GTPase-activating prot 99.0 1.8E-09 4E-14 82.4 9.1 87 73-172 136-222 (669)
95 KOG0506 Glutaminase (contains 99.0 4.8E-10 1E-14 85.1 5.2 87 32-137 508-595 (622)
96 KOG3609 Receptor-activated Ca2 99.0 2.3E-09 5.1E-14 86.5 9.3 125 29-176 24-157 (822)
97 KOG0705 GTPase-activating prot 99.0 2.8E-09 6.1E-14 82.7 7.9 92 74-175 628-719 (749)
98 PF00023 Ank: Ankyrin repeat H 98.9 2.2E-09 4.7E-14 52.9 4.4 29 114-142 1-29 (33)
99 KOG0522 Ankyrin repeat protein 98.9 6E-09 1.3E-13 80.2 7.4 89 32-137 22-110 (560)
100 PF00023 Ank: Ankyrin repeat H 98.9 2.9E-09 6.3E-14 52.4 3.8 31 148-179 1-31 (33)
101 KOG0522 Ankyrin repeat protein 98.8 1.9E-08 4.2E-13 77.5 7.7 87 73-172 23-110 (560)
102 KOG0818 GTPase-activating prot 98.8 3.4E-08 7.3E-13 75.7 8.7 88 29-135 132-220 (669)
103 KOG0705 GTPase-activating prot 98.8 4.1E-08 8.9E-13 76.5 7.8 95 31-140 625-719 (749)
104 KOG0511 Ankyrin repeat protein 98.5 1.1E-06 2.4E-11 65.6 8.5 68 73-154 39-107 (516)
105 KOG0783 Uncharacterized conser 98.5 8.5E-08 1.8E-12 77.8 2.8 68 108-176 45-112 (1267)
106 KOG0521 Putative GTPase activa 98.4 2.9E-07 6.3E-12 76.0 5.0 88 67-169 654-741 (785)
107 KOG0511 Ankyrin repeat protein 98.4 8.6E-07 1.9E-11 66.2 6.8 60 32-98 38-97 (516)
108 KOG0782 Predicted diacylglycer 98.4 7.6E-07 1.6E-11 69.7 6.4 88 32-137 901-989 (1004)
109 KOG0520 Uncharacterized conser 98.4 7E-07 1.5E-11 74.0 5.3 98 62-175 567-666 (975)
110 KOG2384 Major histocompatibili 98.3 1.1E-06 2.3E-11 59.8 5.1 64 107-172 4-68 (223)
111 KOG2384 Major histocompatibili 98.3 1.5E-06 3.3E-11 59.0 5.7 68 60-140 3-71 (223)
112 KOG0520 Uncharacterized conser 98.2 1.3E-06 2.9E-11 72.4 4.1 121 32-172 576-702 (975)
113 KOG0521 Putative GTPase activa 97.8 3.3E-05 7.1E-10 64.2 4.3 85 31-134 657-741 (785)
114 smart00248 ANK ankyrin repeats 97.6 0.0002 4.4E-09 32.7 4.0 27 149-176 2-28 (30)
115 smart00248 ANK ankyrin repeats 97.5 0.00029 6.2E-09 32.2 3.9 28 114-141 1-28 (30)
116 KOG3609 Receptor-activated Ca2 97.4 0.0003 6.5E-09 57.8 5.7 95 32-142 64-158 (822)
117 KOG2505 Ankyrin repeat protein 97.4 0.00025 5.4E-09 55.1 4.6 75 83-165 404-478 (591)
118 PF06128 Shigella_OspC: Shigel 97.0 0.0095 2.1E-07 42.2 8.4 118 34-175 157-279 (284)
119 KOG2505 Ankyrin repeat protein 96.7 0.0025 5.3E-08 49.8 4.4 51 69-135 430-480 (591)
120 PF03158 DUF249: Multigene fam 96.4 0.088 1.9E-06 36.2 9.6 121 33-171 49-191 (192)
121 PF06128 Shigella_OspC: Shigel 96.0 0.046 9.9E-07 38.8 6.7 97 32-140 181-279 (284)
122 PF11929 DUF3447: Domain of un 94.7 0.097 2.1E-06 30.6 4.6 46 73-137 9-54 (76)
123 PF11929 DUF3447: Domain of un 93.5 0.22 4.8E-06 29.1 4.4 48 32-93 8-55 (76)
124 PF03158 DUF249: Multigene fam 90.0 0.77 1.7E-05 31.7 4.4 45 74-136 147-191 (192)
125 PF04053 Coatomer_WDAD: Coatom 48.2 55 0.0012 26.3 5.3 53 30-94 321-374 (443)
126 KOG4591 Uncharacterized conser 47.0 12 0.00026 26.5 1.3 48 30-80 222-270 (280)
127 KOG4591 Uncharacterized conser 45.9 15 0.00033 25.9 1.7 52 65-125 218-270 (280)
128 PF04053 Coatomer_WDAD: Coatom 40.6 32 0.0007 27.6 3.0 22 151-173 407-429 (443)
129 PF12645 HTH_16: Helix-turn-he 26.2 99 0.0021 17.4 2.7 22 73-94 2-23 (65)
130 KOG3836 HLH transcription fact 21.9 19 0.00041 29.8 -1.1 45 81-137 407-451 (605)
131 TIGR02957 SigX4 RNA polymerase 20.2 1E+02 0.0022 22.8 2.5 53 32-92 171-223 (281)
No 1
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=1.7e-27 Score=157.73 Aligned_cols=128 Identities=23% Similarity=0.279 Sum_probs=111.3
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHH
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIR 109 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~ 109 (179)
..+|||.||..|+.++|+.|+. ..+..+|..+..|.| +||||+..|+.+|+++|+++|+.+..
T Consensus 72 GWtPlhia~s~g~~evVk~Ll~-----r~~advna~tn~G~T-~LHyAagK~r~eIaqlLle~ga~i~~----------- 134 (226)
T KOG4412|consen 72 GWTPLHIAASNGNDEVVKELLN-----RSGADVNATTNGGQT-CLHYAAGKGRLEIAQLLLEKGALIRI----------- 134 (226)
T ss_pred CCchhhhhhhcCcHHHHHHHhc-----CCCCCcceecCCCcc-eehhhhcCChhhHHHHHHhcCCCCcc-----------
Confidence 4578888888888888888765 336677888888888 88998888888888888888887766
Q ss_pred hccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCC
Q 042183 110 MMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVS 177 (179)
Q Consensus 110 ~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~ 177 (179)
+|..|.||||.|+.-|..+++++|+..|+.++ ..|..|+||||.|.. -|+.+++.+|+++|++.+
T Consensus 135 -kD~~~qtplHRAAavGklkvie~Li~~~a~~n-~qDk~G~TpL~~al~-e~~~d~a~lLV~~gAd~~ 199 (226)
T KOG4412|consen 135 -KDKQGQTPLHRAAAVGKLKVIEYLISQGAPLN-TQDKYGFTPLHHALA-EGHPDVAVLLVRAGADTD 199 (226)
T ss_pred -cccccCchhHHHHhccchhhHHHHHhcCCCCC-cccccCccHHHHHHh-ccCchHHHHHHHhcccee
Confidence 99999999999999999999999999998876 899999999999988 899999999999998865
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=4.1e-27 Score=155.88 Aligned_cols=130 Identities=16% Similarity=0.139 Sum_probs=119.2
Q ss_pred cCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHh-hcccCCchhhhhhHH
Q 042183 29 QIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIER-AKLLQHEDEELESGM 107 (179)
Q Consensus 29 ~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~~~~~ 107 (179)
+.-+|||+||..|+.+++..|++ +....++.+|..||| |||+|+..|+.++|+.|+.+ +++++.
T Consensus 37 D~Rt~LHwa~S~g~~eiv~fLls-----q~nv~~ddkDdaGWt-Plhia~s~g~~evVk~Ll~r~~advna--------- 101 (226)
T KOG4412|consen 37 DGRTPLHWACSFGHVEIVYFLLS-----QPNVKPDDKDDAGWT-PLHIAASNGNDEVVKELLNRSGADVNA--------- 101 (226)
T ss_pred cCCceeeeeeecCchhHHHHHHh-----cCCCCCCCccccCCc-hhhhhhhcCcHHHHHHHhcCCCCCcce---------
Confidence 34588999999999999998876 455567888999999 99999999999999999998 787776
Q ss_pred HHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 108 IRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 108 ~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
.+..|.|+||+|+..|+.+++++|++.|+.++ .+|..|.||||-|+. .|..+++++|+..|+.++.
T Consensus 102 ---~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~-~kD~~~qtplHRAAa-vGklkvie~Li~~~a~~n~ 167 (226)
T KOG4412|consen 102 ---TTNGGQTCLHYAAGKGRLEIAQLLLEKGALIR-IKDKQGQTPLHRAAA-VGKLKVIEYLISQGAPLNT 167 (226)
T ss_pred ---ecCCCcceehhhhcCChhhHHHHHHhcCCCCc-ccccccCchhHHHHh-ccchhhHHHHHhcCCCCCc
Confidence 99999999999999999999999999999876 999999999999999 9999999999999987764
No 3
>PHA02791 ankyrin-like protein; Provisional
Probab=99.93 E-value=6.9e-25 Score=160.51 Aligned_cols=140 Identities=16% Similarity=0.150 Sum_probs=110.9
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchh----h---
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDE----E--- 102 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~----~--- 102 (179)
..+|||.|+..|+.++++.|++ .+..++.+|..|.| |||+|+..|+.+++++|+++|++.+.... .
T Consensus 61 ~~TpLh~Aa~~g~~eiV~lLL~------~Gadvn~~d~~G~T-pLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~ 133 (284)
T PHA02791 61 NEFPLHQAATLEDTKIVKILLF------SGMDDSQFDDKGNT-ALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFY 133 (284)
T ss_pred CCCHHHHHHHCCCHHHHHHHHH------CCCCCCCCCCCCCC-HHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHH
Confidence 3578888888888888888876 66778888999999 99999999999999999999987754221 1
Q ss_pred ---------hhhHHHH----hcc-CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCH-HHHHHHhcCCHHHHH
Q 042183 103 ---------LESGMIR----MMN-KEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTP-LCMVAEYEHSSHMVV 167 (179)
Q Consensus 103 ---------~~~~~~~----~~~-~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tp-l~~A~~~~~~~~~~~ 167 (179)
.....+. ..+ ..|.||||+|+..|+.+++++|+++|++++ .++..|.|| ||+|+. .|+.++++
T Consensus 134 ~Aa~~g~~eivk~LL~~~~~~~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n-~~d~~g~t~~L~~Aa~-~~~~e~v~ 211 (284)
T PHA02791 134 HAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYMTSTN-TNNSLLFIPDIKLAID-NKDLEMLQ 211 (284)
T ss_pred HHHHcCCHHHHHHHHhcCCcccccccCccHHHHHHHcCCHHHHHHHHHCCCCCC-cccCCCCChHHHHHHH-cCCHHHHH
Confidence 0000111 122 247899999999999999999999999876 788888876 999999 99999999
Q ss_pred HHHhcCCCCCC
Q 042183 168 AILKNCTSVSH 178 (179)
Q Consensus 168 ~Ll~~g~~~~~ 178 (179)
+|+++|++++.
T Consensus 212 lLl~~Ga~in~ 222 (284)
T PHA02791 212 ALFKYDINIYS 222 (284)
T ss_pred HHHHCCCCCcc
Confidence 99999988753
No 4
>PHA02791 ankyrin-like protein; Provisional
Probab=99.93 E-value=1.6e-24 Score=158.62 Aligned_cols=114 Identities=17% Similarity=0.192 Sum_probs=83.1
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhhCcccccccC-CCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHh
Q 042183 32 PNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVN-AKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRM 110 (179)
Q Consensus 32 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~ 110 (179)
+|||.|+..|+.++++.|++ ..+. ..| ..|.| |||+|+..|+.+++++|+++|++++.
T Consensus 130 TpL~~Aa~~g~~eivk~LL~-----~~~~---~~d~~~g~T-pLh~Aa~~g~~eiv~lLL~~gAd~n~------------ 188 (284)
T PHA02791 130 TSFYHAVMLNDVSIVSYFLS-----EIPS---TFDLAILLS-CIHITIKNGHVDMMILLLDYMTSTNT------------ 188 (284)
T ss_pred HHHHHHHHcCCHHHHHHHHh-----cCCc---ccccccCcc-HHHHHHHcCCHHHHHHHHHCCCCCCc------------
Confidence 45555555555555555544 1111 112 23667 77777777777777777777776665
Q ss_pred ccCCCCcH-HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCC
Q 042183 111 MNKEKHTA-LHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTS 175 (179)
Q Consensus 111 ~~~~g~t~-l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~ 175 (179)
++..|.|| ||+|+..|+.+++++|++.|++++ .+|..+ +| .++.|++++|+++-++
T Consensus 189 ~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in-~~~~~~-~~-------l~~~e~~~~ll~~~~~ 245 (284)
T PHA02791 189 NNSLLFIPDIKLAIDNKDLEMLQALFKYDINIY-SVNLEN-VL-------LDDAEIAKMIIEKHVE 245 (284)
T ss_pred ccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCc-cCcccC-cc-------CCCHHHHHHHHHhhhh
Confidence 88888876 999999999999999999999986 788744 55 6899999999998765
No 5
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.92 E-value=5.3e-24 Score=164.60 Aligned_cols=128 Identities=18% Similarity=0.234 Sum_probs=85.0
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHH
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIR 109 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~ 109 (179)
..+|||.|+..|+.+.++.|++ ......+..+..|.| |||+|+..|+.+++++|+++|++++.
T Consensus 68 ~~t~L~~A~~~g~~~~v~~Ll~-----~~~~~~~~~~~~g~t-pL~~A~~~~~~~iv~~Ll~~gad~~~----------- 130 (413)
T PHA02875 68 IESELHDAVEEGDVKAVEELLD-----LGKFADDVFYKDGMT-PLHLATILKKLDIMKLLIARGADPDI----------- 130 (413)
T ss_pred cccHHHHHHHCCCHHHHHHHHH-----cCCcccccccCCCCC-HHHHHHHhCCHHHHHHHHhCCCCCCC-----------
Confidence 3456666666666666666654 111122334456777 77777777777777777777776665
Q ss_pred hccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCC
Q 042183 110 MMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVS 177 (179)
Q Consensus 110 ~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~ 177 (179)
++..|.||||+|+..|+.+++++|++.|++++ .+|..|.||||+|+. .|+.+++++|+++|++++
T Consensus 131 -~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~-~~d~~g~TpL~~A~~-~g~~eiv~~Ll~~ga~~n 195 (413)
T PHA02875 131 -PNTDKFSPLHLAVMMGDIKGIELLIDHKACLD-IEDCCGCTPLIIAMA-KGDIAICKMLLDSGANID 195 (413)
T ss_pred -CCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCC-CCCCCCCCHHHHHHH-cCCHHHHHHHHhCCCCCC
Confidence 66667777777777777777777777777654 666677777777777 777777777777776665
No 6
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.92 E-value=6.5e-24 Score=144.74 Aligned_cols=131 Identities=15% Similarity=0.175 Sum_probs=113.3
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHH---HHHHHHHhhcccCCchhhhhhH
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCD---IVSVLIERAKLLQHEDEELESG 106 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~---~v~~ll~~~~~~~~~~~~~~~~ 106 (179)
....||.||+.|+++.++.+++. +...+..++..|..|+| |||+|+..|+.+ ++++|+++|++++.
T Consensus 20 ~~~~l~~a~~~g~~~~l~~~~~~--l~~~g~~~~~~d~~g~t-~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~-------- 88 (166)
T PHA02743 20 EQNTFLRICRTGNIYELMEVAPF--ISGDGHLLHRYDHHGRQ-CTHMVAWYDRANAVMKIELLVNMGADINA-------- 88 (166)
T ss_pred CCcHHHHHHHcCCHHHHHHHHHH--HhhcchhhhccCCCCCc-HHHHHHHhCccCHHHHHHHHHHcCCCCCC--------
Confidence 44679999999999777766542 22356677888999999 999999998865 48999999998877
Q ss_pred HHHhcc-CCCCcHHHHHHHcCCHHHHHHHHh-cCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCC
Q 042183 107 MIRMMN-KEKHTALHEAVFHKIVDVVKILTR-EDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVS 177 (179)
Q Consensus 107 ~~~~~~-~~g~t~l~~A~~~g~~~~~~~Ll~-~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~ 177 (179)
++ ..|.||||+|+..|+.+++++|+. .|+++. ..+..|.||||+|+. .++.+++++|+++|++++
T Consensus 89 ----~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~-~~d~~g~tpL~~A~~-~~~~~iv~~Ll~~ga~~~ 155 (166)
T PHA02743 89 ----RELGTGNTLLHIAASTKNYELAEWLCRQLGVNLG-AINYQHETAYHIAYK-MRDRRMMEILRANGAVCD 155 (166)
T ss_pred ----CCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCcc-CcCCCCCCHHHHHHH-cCCHHHHHHHHHcCCCCC
Confidence 87 589999999999999999999995 799876 789999999999999 999999999999998875
No 7
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.91 E-value=3.5e-23 Score=160.08 Aligned_cols=128 Identities=17% Similarity=0.110 Sum_probs=118.2
Q ss_pred cCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHH
Q 042183 29 QIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMI 108 (179)
Q Consensus 29 ~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~ 108 (179)
...+|||.|+..|+.++++.|++ .+..++.++..|.| |||+|+..|+.+++++|+++|+..+.
T Consensus 101 ~g~tpL~~A~~~~~~~iv~~Ll~------~gad~~~~~~~g~t-pLh~A~~~~~~~~v~~Ll~~g~~~~~---------- 163 (413)
T PHA02875 101 DGMTPLHLATILKKLDIMKLLIA------RGADPDIPNTDKFS-PLHLAVMMGDIKGIELLIDHKACLDI---------- 163 (413)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHh------CCCCCCCCCCCCCC-HHHHHHHcCCHHHHHHHHhcCCCCCC----------
Confidence 45689999999999999999998 67788889999999 99999999999999999999998877
Q ss_pred HhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCC-CCHHHHHHHhcCCHHHHHHHHhcCCCCC
Q 042183 109 RMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYN-KTPLCMVAEYEHSSHMVVAILKNCTSVS 177 (179)
Q Consensus 109 ~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g-~tpl~~A~~~~~~~~~~~~Ll~~g~~~~ 177 (179)
+|..|+||||+|+..|+.+++++|++.|++++ ..+..| .||+++|+. .|+.+++++|+++|++++
T Consensus 164 --~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n-~~~~~~~~t~l~~A~~-~~~~~iv~~Ll~~gad~n 229 (413)
T PHA02875 164 --EDCCGCTPLIIAMAKGDIAICKMLLDSGANID-YFGKNGCVAALCYAIE-NNKIDIVRLFIKRGADCN 229 (413)
T ss_pred --CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC-cCCCCCCchHHHHHHH-cCCHHHHHHHHHCCcCcc
Confidence 89999999999999999999999999999987 666666 589999999 999999999999999976
No 8
>PHA02741 hypothetical protein; Provisional
Probab=99.91 E-value=3.4e-23 Score=141.70 Aligned_cols=132 Identities=19% Similarity=0.195 Sum_probs=113.3
Q ss_pred ccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCC----HHHHHHHHHhhcccCCchhhh
Q 042183 28 LQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGH----CDIVSVLIERAKLLQHEDEEL 103 (179)
Q Consensus 28 ~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~----~~~v~~ll~~~~~~~~~~~~~ 103 (179)
....++||.|++.|+.+.++.|+........+..++.+|..|.| |||+|+..|+ .+++++|++.|++.+.
T Consensus 19 ~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T-~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~----- 92 (169)
T PHA02741 19 SEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQM-CIHIAAEKHEAQLAAEIIDHLIELGADINA----- 92 (169)
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCc-HHHHHHHcCChHHHHHHHHHHHHcCCCCCC-----
Confidence 34568999999999999999886411001134567889999999 9999999998 5899999999998877
Q ss_pred hhHHHHhccC-CCCcHHHHHHHcCCHHHHHHHHh-cCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCC
Q 042183 104 ESGMIRMMNK-EKHTALHEAVFHKIVDVVKILTR-EDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCT 174 (179)
Q Consensus 104 ~~~~~~~~~~-~g~t~l~~A~~~g~~~~~~~Ll~-~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~ 174 (179)
++. .|+||||+|+..++.+++++|+. .|+++. ..|..|+|||++|+. .++.+++++|++.++
T Consensus 93 -------~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~-~~n~~g~tpL~~A~~-~~~~~iv~~L~~~~~ 156 (169)
T PHA02741 93 -------QEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLH-FCNADNKSPFELAID-NEDVAMMQILREIVA 156 (169)
T ss_pred -------CCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC-cCCCCCCCHHHHHHH-CCCHHHHHHHHHHHH
Confidence 775 89999999999999999999997 488876 889999999999999 999999999998764
No 9
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.90 E-value=1.3e-22 Score=143.26 Aligned_cols=130 Identities=13% Similarity=0.148 Sum_probs=100.6
Q ss_pred ccCCHHHHHHHHcC--ChHHHHHHHHHHHHhhCcccccccC-CCCCcHHHHHHHHc---CCHHHHHHHHHhhcccCCchh
Q 042183 28 LQIDPNLFKAAAAG--NLEPFKDMAREEILEICPSLLLQVN-AKGDSRSLLVAAKF---GHCDIVSVLIERAKLLQHEDE 101 (179)
Q Consensus 28 ~~~~~~l~~A~~~g--~~~~~~~ll~~~~~~~~~~~~~~~~-~~g~t~~L~~A~~~---g~~~~v~~ll~~~~~~~~~~~ 101 (179)
....+|||.|+..+ +.++++.|++ .+..++.++ ..|.| |||+|+.. ++.+++++|+++|++++.
T Consensus 49 ~~g~TpLh~a~~~~~~~~eiv~~Ll~------~gadvn~~~~~~g~T-pLh~a~~~~~~~~~eiv~~Ll~~gadin~--- 118 (209)
T PHA02859 49 DLYETPIFSCLEKDKVNVEILKFLIE------NGADVNFKTRDNNLS-ALHHYLSFNKNVEPEILKILIDSGSSITE--- 118 (209)
T ss_pred ccCCCHHHHHHHcCCCCHHHHHHHHH------CCCCCCccCCCCCCC-HHHHHHHhCccccHHHHHHHHHCCCCCCC---
Confidence 34557777777644 6777777776 566667665 46777 88877653 367788888888777766
Q ss_pred hhhhHHHHhccCCCCcHHHHHHH--cCCHHHHHHHHhcCCCCCCCCCCCCCCHHHH-HHHhcCCHHHHHHHHhcCCCCCC
Q 042183 102 ELESGMIRMMNKEKHTALHEAVF--HKIVDVVKILTREDLDYPYSANNYNKTPLCM-VAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 102 ~~~~~~~~~~~~~g~t~l~~A~~--~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~-A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
++..|.||||.|+. .++.+++++|++.|++++ .+|..|.||||. |+. .++.+++++|+++|++++.
T Consensus 119 ---------~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin-~~d~~g~t~Lh~~a~~-~~~~~iv~~Ll~~Gadi~~ 187 (209)
T PHA02859 119 ---------EDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFL-NKDFDNNNILYSYILF-HSDKKIFDFLTSLGIDINE 187 (209)
T ss_pred ---------cCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcc-cccCCCCcHHHHHHHh-cCCHHHHHHHHHcCCCCCC
Confidence 88899999998876 468899999999999976 789999999996 456 7889999999999988764
No 10
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.90 E-value=6.1e-23 Score=161.34 Aligned_cols=140 Identities=19% Similarity=0.100 Sum_probs=112.8
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhh-------
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEE------- 102 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~------- 102 (179)
.-+|||.|+..|+.++++.|++ .+..++.+|..|.| |||+||..|+.++++.|+..+.........
T Consensus 37 ~~tPLh~A~~~g~~e~vk~Ll~------~gadvn~~d~~g~T-pLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~ 109 (477)
T PHA02878 37 PFIPLHQAVEARNLDVVKSLLT------RGHNVNQPDHRDLT-PLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAF 109 (477)
T ss_pred CcchHHHHHHcCCHHHHHHHHH------CCCCCCCCCCCCCC-HHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHH
Confidence 4478999999999999999998 67788999999999 999999999988888888765332210000
Q ss_pred ---------------------------------------------hhhHHHHhccCC-CCcHHHHHHHcCCHHHHHHHHh
Q 042183 103 ---------------------------------------------LESGMIRMMNKE-KHTALHEAVFHKIVDVVKILTR 136 (179)
Q Consensus 103 ---------------------------------------------~~~~~~~~~~~~-g~t~l~~A~~~g~~~~~~~Ll~ 136 (179)
..+..++.++.. |+||||+|+..|+.+++++|++
T Consensus 110 ~~~~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~ 189 (477)
T PHA02878 110 NNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLS 189 (477)
T ss_pred HcCCHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHH
Confidence 011123445566 8999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 137 EDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 137 ~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
.|++++ ..|..|.||||+|+. .|+.+++++|+++|++++.
T Consensus 190 ~gad~n-~~d~~g~tpLh~A~~-~~~~~iv~~Ll~~ga~in~ 229 (477)
T PHA02878 190 YGANVN-IPDKTNNSPLHHAVK-HYNKPIVHILLENGASTDA 229 (477)
T ss_pred CCCCCC-CcCCCCCCHHHHHHH-hCCHHHHHHHHHcCCCCCC
Confidence 999876 788899999999999 9999999999999988764
No 11
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.90 E-value=1.5e-23 Score=161.56 Aligned_cols=128 Identities=22% Similarity=0.238 Sum_probs=104.5
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhc
Q 042183 32 PNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMM 111 (179)
Q Consensus 32 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~ 111 (179)
..++.|++.|+++.++.+++ ..+..++..|.+|.+ +||+|+.+++.+++++|+++|++++. .
T Consensus 46 ~~~v~A~q~G~l~~v~~lve-----~~g~~v~~~D~~g~t-lLHWAAiNNrl~v~r~li~~gadvn~------------~ 107 (600)
T KOG0509|consen 46 DDIVKATQYGELETVKELVE-----SEGESVNNPDREGVT-LLHWAAINNRLDVARYLISHGADVNA------------I 107 (600)
T ss_pred hhhhhHhhcchHHHHHHHHh-----hcCcCCCCCCcCCcc-ceeHHHHcCcHHHHHHHHHcCCCccc------------c
Confidence 45888888888888888876 236677778888888 88888888888888888888888776 5
Q ss_pred c-CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCCC
Q 042183 112 N-KEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSHR 179 (179)
Q Consensus 112 ~-~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~r 179 (179)
+ .-+.||||+|+++|+..++++|+++|+|+. .+|.+|.+|+|+|++ .|+.-.+.+|+.+|+|++.|
T Consensus 108 gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt-~~D~~G~~~lHla~~-~~~~~~vayll~~~~d~d~~ 174 (600)
T KOG0509|consen 108 GGVLGSTPLHWAARNGHISVVDLLLQHGADPT-LKDKQGLTPLHLAAQ-FGHTALVAYLLSKGADIDLR 174 (600)
T ss_pred CCCCCCCcchHHHHcCcHHHHHHHHHcCCCCc-eecCCCCcHHHHHHH-hCchHHHHHHHHhcccCCCc
Confidence 4 557788888888888888888888888876 888888888888888 88888888888888877654
No 12
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.90 E-value=1.4e-23 Score=161.75 Aligned_cols=129 Identities=22% Similarity=0.181 Sum_probs=113.1
Q ss_pred ccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccC-CCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhH
Q 042183 28 LQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVN-AKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESG 106 (179)
Q Consensus 28 ~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~ 106 (179)
++.-+.||.|+.+++++++++|++ +++.+|... ..+.| |||+|+++|+..++.+|+++|++++.
T Consensus 76 ~~g~tlLHWAAiNNrl~v~r~li~------~gadvn~~gG~l~st-PLHWAar~G~~~vv~lLlqhGAdpt~-------- 140 (600)
T KOG0509|consen 76 REGVTLLHWAAINNRLDVARYLIS------HGADVNAIGGVLGST-PLHWAARNGHISVVDLLLQHGADPTL-------- 140 (600)
T ss_pred cCCccceeHHHHcCcHHHHHHHHH------cCCCccccCCCCCCC-cchHHHHcCcHHHHHHHHHcCCCCce--------
Confidence 345578999999999999999998 888999888 45566 99999999999999999999999988
Q ss_pred HHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCC
Q 042183 107 MIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVS 177 (179)
Q Consensus 107 ~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~ 177 (179)
+|..|.+|+|.|+++|+.-.+-||+..++++. .+|.+|+|||++|+. +|+...+..|++.|+++.
T Consensus 141 ----~D~~G~~~lHla~~~~~~~~vayll~~~~d~d-~~D~~grTpLmwAay-kg~~~~v~~LL~f~a~~~ 205 (600)
T KOG0509|consen 141 ----KDKQGLTPLHLAAQFGHTALVAYLLSKGADID-LRDNNGRTPLMWAAY-KGFALFVRRLLKFGASLL 205 (600)
T ss_pred ----ecCCCCcHHHHHHHhCchHHHHHHHHhcccCC-CcCCCCCCHHHHHHH-hcccHHHHHHHHhccccc
Confidence 88899999999999999999999998888876 889999999999998 888877888888887654
No 13
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.90 E-value=2.5e-23 Score=140.34 Aligned_cols=134 Identities=16% Similarity=0.224 Sum_probs=109.3
Q ss_pred ccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCH---HHHHHHHHhhcccCCchhhhh
Q 042183 28 LQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHC---DIVSVLIERAKLLQHEDEELE 104 (179)
Q Consensus 28 ~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~---~~v~~ll~~~~~~~~~~~~~~ 104 (179)
....+|||+|++.|++..+.... .......+..++..|..|.| |||+|+..|+. +++++|+++|++.+.
T Consensus 15 ~~g~tpLh~A~~~g~~~~l~~~~-~~~~~~~~~~~~~~d~~g~t-~Lh~a~~~~~~~~~e~v~~Ll~~gadin~------ 86 (154)
T PHA02736 15 IEGENILHYLCRNGGVTDLLAFK-NAISDENRYLVLEYNRHGKQ-CVHIVSNPDKADPQEKLKLLMEWGADING------ 86 (154)
T ss_pred CCCCCHHHHHHHhCCHHHHHHHH-HHhcchhHHHHHHhcCCCCE-EEEeecccCchhHHHHHHHHHHcCCCccc------
Confidence 34679999999999853332211 11111223345667899999 99999999987 468899999998877
Q ss_pred hHHHHhcc-CCCCcHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCC
Q 042183 105 SGMIRMMN-KEKHTALHEAVFHKIVDVVKILTRE-DLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVS 177 (179)
Q Consensus 105 ~~~~~~~~-~~g~t~l~~A~~~g~~~~~~~Ll~~-~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~ 177 (179)
++ ..|+||||+|+..|+.+++++|+.. |++++ ..+..|.||||+|+. .|+.+++++|+++|++++
T Consensus 87 ------~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n-~~~~~g~tpL~~A~~-~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 87 ------KERVFGNTPLHIAVYTQNYELATWLCNQPGVNME-ILNYAFKTPYYVACE-RHDAKMMNILRAKGAQCK 153 (154)
T ss_pred ------cCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCc-cccCCCCCHHHHHHH-cCCHHHHHHHHHcCCCCC
Confidence 87 5899999999999999999999984 88876 899999999999999 999999999999998865
No 14
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.90 E-value=1e-22 Score=158.36 Aligned_cols=142 Identities=17% Similarity=0.164 Sum_probs=109.6
Q ss_pred cccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchh-----
Q 042183 27 QLQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDE----- 101 (179)
Q Consensus 27 ~~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~----- 101 (179)
.....+|||.|++.|+.++++.|++ .+..++..+..|.+ |||+|+..|+.+++++|+++|++......
T Consensus 32 ~~~~~tpL~~A~~~g~~~iv~~Ll~------~Ga~~n~~~~~~~t-~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~ 104 (434)
T PHA02874 32 VDETTTPLIDAIRSGDAKIVELFIK------HGADINHINTKIPH-PLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEK 104 (434)
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHH------CCCCCCCCCCCCCC-HHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCH
Confidence 3445699999999999999999987 67778888999999 99999999999999999999876543100
Q ss_pred h------hhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCC
Q 042183 102 E------LESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTS 175 (179)
Q Consensus 102 ~------~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~ 175 (179)
+ ..+..++.++..|.||||+|+..|+.+++++|++.|++++ ..|..|.||||+|+. .|+.+++++|+++|++
T Consensus 105 ~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n-~~d~~g~tpLh~A~~-~~~~~iv~~Ll~~g~~ 182 (434)
T PHA02874 105 DMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVN-IEDDNGCYPIHIAIK-HNFFDIIKLLLEKGAY 182 (434)
T ss_pred HHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCC-CcCCCCCCHHHHHHH-CCcHHHHHHHHHCCCC
Confidence 0 1112234466677788888888888888888887777765 677777788888777 7777777777777776
Q ss_pred CC
Q 042183 176 VS 177 (179)
Q Consensus 176 ~~ 177 (179)
++
T Consensus 183 ~n 184 (434)
T PHA02874 183 AN 184 (434)
T ss_pred CC
Confidence 54
No 15
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.90 E-value=3.1e-22 Score=155.67 Aligned_cols=135 Identities=18% Similarity=0.195 Sum_probs=119.0
Q ss_pred cCCHHHHHHHHcCChHHHHHHHHHH-----------------HHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHH
Q 042183 29 QIDPNLFKAAAAGNLEPFKDMAREE-----------------ILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIE 91 (179)
Q Consensus 29 ~~~~~l~~A~~~g~~~~~~~ll~~~-----------------~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~ 91 (179)
...+|||.|+..|+.++++.|++.+ .+-..+..++.++..|.| |||+|+..|+.+++++|++
T Consensus 67 ~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T-~Lh~A~~~~~~~~v~~Ll~ 145 (434)
T PHA02874 67 KIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKT-FLHYAIKKGDLESIKMLFE 145 (434)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCcc-HHHHHHHCCCHHHHHHHHh
Confidence 3568999999999999999998721 111234567778899999 9999999999999999999
Q ss_pred hhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHh
Q 042183 92 RAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILK 171 (179)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~ 171 (179)
+|++++. ++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+. .|+.+++++|++
T Consensus 146 ~gad~n~------------~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n-~~~~~g~tpL~~A~~-~g~~~iv~~Ll~ 211 (434)
T PHA02874 146 YGADVNI------------EDDNGCYPIHIAIKHNFFDIIKLLLEKGAYAN-VKDNNGESPLHNAAE-YGDYACIKLLID 211 (434)
T ss_pred CCCCCCC------------cCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHH-cCCHHHHHHHHh
Confidence 9998877 89999999999999999999999999999976 789999999999999 999999999999
Q ss_pred cCCCCCC
Q 042183 172 NCTSVSH 178 (179)
Q Consensus 172 ~g~~~~~ 178 (179)
.|++++.
T Consensus 212 ~g~~i~~ 218 (434)
T PHA02874 212 HGNHIMN 218 (434)
T ss_pred CCCCCcC
Confidence 9988653
No 16
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.90 E-value=1.4e-22 Score=167.90 Aligned_cols=129 Identities=24% Similarity=0.271 Sum_probs=111.3
Q ss_pred cCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHH
Q 042183 29 QIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMI 108 (179)
Q Consensus 29 ~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~ 108 (179)
...++|+.|+..|+.+.++.|++ .+.+++..|..|.| |||+|+..|+.+++++|+++|++++.
T Consensus 524 ~~~~~L~~Aa~~g~~~~l~~Ll~------~G~d~n~~d~~G~T-pLh~Aa~~g~~~~v~~Ll~~gadin~---------- 586 (823)
T PLN03192 524 NMASNLLTVASTGNAALLEELLK------AKLDPDIGDSKGRT-PLHIAASKGYEDCVLVLLKHACNVHI---------- 586 (823)
T ss_pred cchhHHHHHHHcCCHHHHHHHHH------CCCCCCCCCCCCCC-HHHHHHHcChHHHHHHHHhcCCCCCC----------
Confidence 35688999999999999999987 66778889999999 99999999999999999999998877
Q ss_pred HhccCCCCcHHH-------------------------------HHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHH
Q 042183 109 RMMNKEKHTALH-------------------------------EAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVA 157 (179)
Q Consensus 109 ~~~~~~g~t~l~-------------------------------~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~ 157 (179)
+|.+|+|||| .|+..|+.+++++|+++|++++ ..|..|.||||+|+
T Consensus 587 --~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin-~~d~~G~TpLh~A~ 663 (823)
T PLN03192 587 --RDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVD-SEDHQGATALQVAM 663 (823)
T ss_pred --cCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHH
Confidence 6666666665 5555666667777888899986 89999999999999
Q ss_pred HhcCCHHHHHHHHhcCCCCCC
Q 042183 158 EYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 158 ~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
. .|+.+++++|+++|++++.
T Consensus 664 ~-~g~~~iv~~Ll~~GAdv~~ 683 (823)
T PLN03192 664 A-EDHVDMVRLLIMNGADVDK 683 (823)
T ss_pred H-CCcHHHHHHHHHcCCCCCC
Confidence 9 9999999999999999864
No 17
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.90 E-value=2.5e-22 Score=141.78 Aligned_cols=128 Identities=15% Similarity=0.181 Sum_probs=110.8
Q ss_pred ccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcC--CHHHHHHHHHhhcccCCchhhhhh
Q 042183 28 LQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFG--HCDIVSVLIERAKLLQHEDEELES 105 (179)
Q Consensus 28 ~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g--~~~~v~~ll~~~~~~~~~~~~~~~ 105 (179)
....+||+.|+..|+++.|+.|++ .++..|..|.| |||+|+..+ +.+++++|+++|++++.
T Consensus 19 ~~~~~pL~~A~~~~~~~~vk~Li~---------~~n~~~~~g~T-pLh~a~~~~~~~~eiv~~Ll~~gadvn~------- 81 (209)
T PHA02859 19 YRYCNPLFYYVEKDDIEGVKKWIK---------FVNDCNDLYET-PIFSCLEKDKVNVEILKFLIENGADVNF------- 81 (209)
T ss_pred hccCcHHHHHHHhCcHHHHHHHHH---------hhhccCccCCC-HHHHHHHcCCCCHHHHHHHHHCCCCCCc-------
Confidence 334688999999999999999986 24667889999 999999865 89999999999998877
Q ss_pred HHHHhcc-CCCCcHHHHHHHc---CCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHh-cCCHHHHHHHHhcCCCCCC
Q 042183 106 GMIRMMN-KEKHTALHEAVFH---KIVDVVKILTREDLDYPYSANNYNKTPLCMVAEY-EHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 106 ~~~~~~~-~~g~t~l~~A~~~---g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~-~~~~~~~~~Ll~~g~~~~~ 178 (179)
++ ..|+||||+|+.. ++.+++++|+++|++++ .+|..|.||||+|+.. .++.+++++|+++|++++.
T Consensus 82 -----~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin-~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~ 153 (209)
T PHA02859 82 -----KTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSIT-EEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLN 153 (209)
T ss_pred -----cCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccc
Confidence 76 4799999998764 47999999999999987 8999999999999861 3689999999999998753
No 18
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.89 E-value=9e-23 Score=134.55 Aligned_cols=123 Identities=22% Similarity=0.161 Sum_probs=109.4
Q ss_pred CHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHh
Q 042183 31 DPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRM 110 (179)
Q Consensus 31 ~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~ 110 (179)
...+..|+..+.+..|+.|++ ..+..+|.+|.+|+| |||.|+.+|+.+|++.|+..|+++..
T Consensus 64 ~rl~lwaae~nrl~eV~~lL~-----e~an~vNtrD~D~YT-pLHRAaYn~h~div~~ll~~gAn~~a------------ 125 (228)
T KOG0512|consen 64 IRLLLWAAEKNRLTEVQRLLS-----EKANHVNTRDEDEYT-PLHRAAYNGHLDIVHELLLSGANKEA------------ 125 (228)
T ss_pred HHHHHHHHhhccHHHHHHHHH-----hcccccccccccccc-HHHHHHhcCchHHHHHHHHccCCccc------------
Confidence 355889999999999999987 577789999999999 99999999999999999999999988
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhc
Q 042183 111 MNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKN 172 (179)
Q Consensus 111 ~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~ 172 (179)
+...||||||-||...+.+|+.+|+++|+|++ ....-..||||+|+..++....+.+|+..
T Consensus 126 ~T~~GWTPLhSAckWnN~~va~~LLqhgaDVn-A~t~g~ltpLhlaa~~rn~r~t~~~Ll~d 186 (228)
T KOG0512|consen 126 KTNEGWTPLHSACKWNNFEVAGRLLQHGADVN-AQTKGLLTPLHLAAGNRNSRDTLELLLHD 186 (228)
T ss_pred ccccCccchhhhhcccchhHHHHHHhccCccc-ccccccchhhHHhhcccchHHHHHHHhhc
Confidence 99999999999999999999999999999997 67777889999999835555666776653
No 19
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.89 E-value=4.5e-22 Score=156.46 Aligned_cols=126 Identities=19% Similarity=0.140 Sum_probs=114.2
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHH
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIR 109 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~ 109 (179)
..+|||.|+..|+.++++.|++ .+..++..|..|.| |||+|+..|+.+++++|++.|++++.
T Consensus 168 g~tpLh~A~~~~~~~iv~~Ll~------~gad~n~~d~~g~t-pLh~A~~~~~~~iv~~Ll~~ga~in~----------- 229 (477)
T PHA02878 168 GNTALHYATENKDQRLTELLLS------YGANVNIPDKTNNS-PLHHAVKHYNKPIVHILLENGASTDA----------- 229 (477)
T ss_pred CCCHHHHHHhCCCHHHHHHHHH------CCCCCCCcCCCCCC-HHHHHHHhCCHHHHHHHHHcCCCCCC-----------
Confidence 5689999999999999999988 67788899999999 99999999999999999999998887
Q ss_pred hccCCCCcHHHHHHHc-CCHHHHHHHHhcCCCCCCCCC-CCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 110 MMNKEKHTALHEAVFH-KIVDVVKILTREDLDYPYSAN-NYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 110 ~~~~~g~t~l~~A~~~-g~~~~~~~Ll~~~~~~~~~~~-~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
++..|.||||+|+.. ++.+++++|++.|++++ ..+ ..|.||||+|+. +.+++++|+++|+|++.
T Consensus 230 -~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn-~~~~~~g~TpLh~A~~---~~~~v~~Ll~~gadin~ 295 (477)
T PHA02878 230 -RDKCGNTPLHISVGYCKDYDILKLLLEHGVDVN-AKSYILGLTALHSSIK---SERKLKLLLEYGADINS 295 (477)
T ss_pred -CCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCC-ccCCCCCCCHHHHHcc---CHHHHHHHHHCCCCCCC
Confidence 999999999999976 78999999999999987 555 479999999954 68999999999999874
No 20
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.89 E-value=5.2e-22 Score=156.19 Aligned_cols=141 Identities=20% Similarity=0.205 Sum_probs=107.4
Q ss_pred ccCCHHHHHHHHcC--ChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchh----
Q 042183 28 LQIDPNLFKAAAAG--NLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDE---- 101 (179)
Q Consensus 28 ~~~~~~l~~A~~~g--~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~---- 101 (179)
....++||.|+..| +.++++.|++ .+..++..+..|.| |||+|+..|+.+++++|+++|++++....
T Consensus 139 ~~g~t~L~~A~~~~~~~~~iv~~Ll~------~g~din~~d~~g~t-pL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~ 211 (480)
T PHA03100 139 SDGENLLHLYLESNKIDLKILKLLID------KGVDINAKNRYGYT-PLHIAVEKGNIDVIKFLLDNGADINAGDIETLL 211 (480)
T ss_pred CCCCcHHHHHHHcCCChHHHHHHHHH------CCCCcccccCCCCC-HHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCc
Confidence 34557888888888 8888888877 56677888888999 99999999999999999999887764210
Q ss_pred -----h--------------------hhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHH
Q 042183 102 -----E--------------------LESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMV 156 (179)
Q Consensus 102 -----~--------------------~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A 156 (179)
. ..+..++.+|..|.||||+|+..|+.+++++|++.|++++ ..|..|.||+++|
T Consensus 212 ~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n-~~d~~g~tpl~~A 290 (480)
T PHA03100 212 FTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPN-LVNKYGDTPLHIA 290 (480)
T ss_pred HHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCcHHHHH
Confidence 0 1112335566778888888888888888888888888765 7778888888888
Q ss_pred HHhcCCHHHHHHHHhcCCCCC
Q 042183 157 AEYEHSSHMVVAILKNCTSVS 177 (179)
Q Consensus 157 ~~~~~~~~~~~~Ll~~g~~~~ 177 (179)
+. .++.+++++|+++|++++
T Consensus 291 ~~-~~~~~iv~~Ll~~g~~i~ 310 (480)
T PHA03100 291 IL-NNNKEIFKLLLNNGPSIK 310 (480)
T ss_pred HH-hCCHHHHHHHHhcCCCHH
Confidence 88 888888888888887654
No 21
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.88 E-value=9.9e-23 Score=152.48 Aligned_cols=125 Identities=28% Similarity=0.308 Sum_probs=112.0
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHH
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIR 109 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~ 109 (179)
..+||..|+..|++++|+.|++ .+..+|.......| ||.-||..|+.+++++|+++++++..
T Consensus 84 gappLWaAsaAGHl~vVk~L~~------~ga~VN~tT~TNSt-PLraACfDG~leivKyLvE~gad~~I----------- 145 (615)
T KOG0508|consen 84 GAPPLWAASAAGHLEVVKLLLR------RGASVNDTTRTNST-PLRAACFDGHLEIVKYLVEHGADPEI----------- 145 (615)
T ss_pred CCchhhHHhccCcHHHHHHHHH------hcCccccccccCCc-cHHHHHhcchhHHHHHHHHcCCCCcc-----------
Confidence 4578999999999999999987 55778877777778 99999999999999999999998877
Q ss_pred hccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCC
Q 042183 110 MMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTS 175 (179)
Q Consensus 110 ~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~ 175 (179)
.|..|.|.||+||..||.+++++|++.|+|++ .++..|.|+||.|++ .|+.+++++|+.+|+.
T Consensus 146 -anrhGhTcLmIa~ykGh~~I~qyLle~gADvn-~ks~kGNTALH~caE-sG~vdivq~Ll~~ga~ 208 (615)
T KOG0508|consen 146 -ANRHGHTCLMIACYKGHVDIAQYLLEQGADVN-AKSYKGNTALHDCAE-SGSVDIVQLLLKHGAK 208 (615)
T ss_pred -cccCCCeeEEeeeccCchHHHHHHHHhCCCcc-hhcccCchHHHhhhh-cccHHHHHHHHhCCce
Confidence 89999999999999999999999999999987 889999999999999 9999999999998853
No 22
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.88 E-value=3.1e-22 Score=157.91 Aligned_cols=151 Identities=18% Similarity=0.213 Sum_probs=100.1
Q ss_pred CccccCCHHHHHHHHcCChHHHHHHHHH-------H--HHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcc
Q 042183 25 ISQLQIDPNLFKAAAAGNLEPFKDMARE-------E--ILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKL 95 (179)
Q Consensus 25 ~~~~~~~~~l~~A~~~g~~~~~~~ll~~-------~--~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~ 95 (179)
+...+..+|||.|++.|+++.++.++++ | .-......++..|.+|.| |||+||+.|+.++++.|+..|+.
T Consensus 220 ~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~t-pLH~a~r~G~~~svd~Ll~~Ga~ 298 (929)
T KOG0510|consen 220 FDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCT-PLHYAARQGGPESVDNLLGFGAS 298 (929)
T ss_pred cccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCc-hHHHHHHcCChhHHHHHHHcCCc
Confidence 4445566889999999999999999882 2 111233457778999999 99999999999999999999988
Q ss_pred cCCchhh--------------------hh-h--HHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCC--CCCCCCC
Q 042183 96 LQHEDEE--------------------LE-S--GMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPY--SANNYNK 150 (179)
Q Consensus 96 ~~~~~~~--------------------~~-~--~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~--~~~~~g~ 150 (179)
++.+.+. +. . -.++..|-.|.||||.|++.||..+++.|++.|+...+ ..|..|.
T Consensus 299 I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~ 378 (929)
T KOG0510|consen 299 INSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGN 378 (929)
T ss_pred ccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCc
Confidence 8772221 00 0 12234445566666666666666666666666665432 2366666
Q ss_pred CHHHHHHHhcCCHHHHHHHHhcCCCCC
Q 042183 151 TPLCMVAEYEHSSHMVVAILKNCTSVS 177 (179)
Q Consensus 151 tpl~~A~~~~~~~~~~~~Ll~~g~~~~ 177 (179)
||||.|+. .|+..++++|+.+|+++.
T Consensus 379 TaLH~Aa~-~g~~~av~~Li~~Ga~I~ 404 (929)
T KOG0510|consen 379 TALHLAAK-YGNTSAVQKLISHGADIG 404 (929)
T ss_pred hhhhHHHH-hccHHHHHHHHHcCCcee
Confidence 66666666 666666666666666553
No 23
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.88 E-value=1.3e-21 Score=154.03 Aligned_cols=126 Identities=20% Similarity=0.239 Sum_probs=95.6
Q ss_pred CHHHHH-----HHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHH--HcCCHHHHHHHHHhhcccCCchhhh
Q 042183 31 DPNLFK-----AAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAA--KFGHCDIVSVLIERAKLLQHEDEEL 103 (179)
Q Consensus 31 ~~~l~~-----A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~--~~g~~~~v~~ll~~~~~~~~~~~~~ 103 (179)
.++||. |+..|+.++++.|++ .+..++..+..|.| |||+|+ ..|+.+++++|+++|++.+.
T Consensus 69 ~t~L~~~~~~~a~~~~~~~iv~~Ll~------~ga~i~~~d~~g~t-pL~~A~~~~~~~~~iv~~Ll~~g~~~~~----- 136 (480)
T PHA03100 69 STPLHYLSNIKYNLTDVKEIVKLLLE------YGANVNAPDNNGIT-PLLYAISKKSNSYSIVEYLLDNGANVNI----- 136 (480)
T ss_pred cCHHHHHHHHHHHhhchHHHHHHHHH------CCCCCCCCCCCCCc-hhhHHHhcccChHHHHHHHHHcCCCCCc-----
Confidence 355666 666666666655554 44555666677777 777777 77777777777777766655
Q ss_pred hhHHHHhccCCCCcHHHHHHHcC--CHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCC
Q 042183 104 ESGMIRMMNKEKHTALHEAVFHK--IVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVS 177 (179)
Q Consensus 104 ~~~~~~~~~~~g~t~l~~A~~~g--~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~ 177 (179)
.+..|.||||.|+..| +.+++++|++.|++++ ..+..|.||||+|+. .|+.+++++|+++|++++
T Consensus 137 -------~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din-~~d~~g~tpL~~A~~-~~~~~iv~~Ll~~ga~~~ 203 (480)
T PHA03100 137 -------KNSDGENLLHLYLESNKIDLKILKLLIDKGVDIN-AKNRYGYTPLHIAVE-KGNIDVIKFLLDNGADIN 203 (480)
T ss_pred -------cCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcc-cccCCCCCHHHHHHH-hCCHHHHHHHHHcCCCcc
Confidence 7788888888888888 8888888888888876 677788889998888 888888888888888765
No 24
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.88 E-value=2.6e-21 Score=142.02 Aligned_cols=126 Identities=16% Similarity=0.134 Sum_probs=109.6
Q ss_pred cccCCHHHHHHHHcCChHHHHHHHHHHHHhhCccccccc----CCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhh
Q 042183 27 QLQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQV----NAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEE 102 (179)
Q Consensus 27 ~~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~----~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~ 102 (179)
.....++||.|++.|+.++++.|++ .+..++.+ +..|.| |||+|+..++.+++++|+++|++++.
T Consensus 30 ~~~~~~lL~~A~~~~~~eivk~LL~------~GAdiN~~~~~sd~~g~T-pLh~Aa~~~~~eivklLL~~GADVN~---- 98 (300)
T PHA02884 30 KICIANILYSSIKFHYTDIIDAILK------LGADPEAPFPLSENSKTN-PLIYAIDCDNDDAAKLLIRYGADVNR---- 98 (300)
T ss_pred cCCCCHHHHHHHHcCCHHHHHHHHH------CCCCccccCcccCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCcCc----
Confidence 4456688999999999999999998 66777776 358999 99999999999999999999998876
Q ss_pred hhhHHHHhc-cCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcC
Q 042183 103 LESGMIRMM-NKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNC 173 (179)
Q Consensus 103 ~~~~~~~~~-~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g 173 (179)
+ +..|.||||.|+..|+.+++++|+..|++++ .+|..|.||||+|+. .++.+++..+..++
T Consensus 99 --------~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin-~kd~~G~TpL~~A~~-~~~~~~~~~~~~~~ 160 (300)
T PHA02884 99 --------YAEEAKITPLYISVLHGCLKCLEILLSYGADIN-IQTNDMVTPIELALM-ICNNFLAFMICDNE 160 (300)
T ss_pred --------ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHH-hCChhHHHHhcCCc
Confidence 5 4579999999999999999999999999987 899999999999999 88777765554433
No 25
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.87 E-value=7e-22 Score=155.89 Aligned_cols=109 Identities=25% Similarity=0.288 Sum_probs=74.6
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhc
Q 042183 32 PNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMM 111 (179)
Q Consensus 32 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~ 111 (179)
+|||.|+..|++.+|+.|++ +.+...++..|..|.| |||.|+.+||.++++.|+++|+.... ....
T Consensus 308 spLH~AA~yg~~ntv~rLL~----~~~~rllne~D~~g~t-pLHlaa~~gH~~v~qlLl~~GA~~~~---------~~e~ 373 (929)
T KOG0510|consen 308 SPLHFAAIYGRINTVERLLQ----ESDTRLLNESDLHGMT-PLHLAAKSGHDRVVQLLLNKGALFLN---------MSEA 373 (929)
T ss_pred CchHHHHHcccHHHHHHHHh----CcCccccccccccCCC-chhhhhhcCHHHHHHHHHhcChhhhc---------cccc
Confidence 44444444444444444443 1233345556666666 66666666666666666666654331 0135
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHH
Q 042183 112 NKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCM 155 (179)
Q Consensus 112 ~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~ 155 (179)
|.+|.||||.|+.+|+..++++|+.+|+++. .+|..|.+++++
T Consensus 374 D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~-~~n~~g~SA~~~ 416 (929)
T KOG0510|consen 374 DSDGNTALHLAAKYGNTSAVQKLISHGADIG-VKNKKGKSAFDT 416 (929)
T ss_pred ccCCchhhhHHHHhccHHHHHHHHHcCCcee-eccccccccccc
Confidence 9999999999999999999999999999986 789999999985
No 26
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.87 E-value=4.5e-21 Score=154.93 Aligned_cols=69 Identities=14% Similarity=0.245 Sum_probs=59.1
Q ss_pred HhccCCCCcHHHHHHH--cCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHh-------------cCCHHHHHHHHhcC
Q 042183 109 RMMNKEKHTALHEAVF--HKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEY-------------EHSSHMVVAILKNC 173 (179)
Q Consensus 109 ~~~~~~g~t~l~~A~~--~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~-------------~~~~~~~~~Ll~~g 173 (179)
+.+|..|+||||+|+. .++.+++++|++.|++++ .+|..|+||||+|+.. .++.+++++|+++|
T Consensus 311 N~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN-~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~G 389 (764)
T PHA02716 311 HYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLN-EPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLG 389 (764)
T ss_pred eccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCc-cCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCC
Confidence 3488899999998764 568999999999999986 8999999999998641 26899999999999
Q ss_pred CCCCC
Q 042183 174 TSVSH 178 (179)
Q Consensus 174 ~~~~~ 178 (179)
++++.
T Consensus 390 ADIn~ 394 (764)
T PHA02716 390 ADITA 394 (764)
T ss_pred CCCCC
Confidence 99864
No 27
>PHA02795 ankyrin-like protein; Provisional
Probab=99.86 E-value=5.1e-21 Score=145.83 Aligned_cols=138 Identities=11% Similarity=0.094 Sum_probs=114.1
Q ss_pred CCHHHHHHHH--cCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCch-h-----
Q 042183 30 IDPNLFKAAA--AGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHED-E----- 101 (179)
Q Consensus 30 ~~~~l~~A~~--~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~-~----- 101 (179)
..++||.++. .|+.++++.|++ +++.++.. .+.| |||.|+..++.+++++|+++|++..... .
T Consensus 116 ~~~~L~~~~~n~~n~~eiV~~LI~------~GADIn~~--~~~t-~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~ 186 (437)
T PHA02795 116 VQDLLLYYLSNAYVEIDIVDFMVD------HGAVIYKI--ECLN-AYFRGICKKESSVVEFILNCGIPDENDVKLDLYKI 186 (437)
T ss_pred ccHHHHHHHHhcCCCHHHHHHHHH------CCCCCCCC--CCCC-HHHHHHHcCcHHHHHHHHhcCCcccccccchhhhh
Confidence 5688999998 889999999988 77777764 4577 9999999999999999999986432111 0
Q ss_pred ---------------h------hhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhc
Q 042183 102 ---------------E------LESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYE 160 (179)
Q Consensus 102 ---------------~------~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~ 160 (179)
+ ..+..++.++..|.||||+|+..|+.+++++|++.|++++ .++..|.||||+|+. .
T Consensus 187 ~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN-~~d~~G~TpLh~Aa~-~ 264 (437)
T PHA02795 187 IQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVN-AVMSNGYTCLDVAVD-R 264 (437)
T ss_pred hccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHH-c
Confidence 0 2334567788999999999999999999999999999987 899999999999999 8
Q ss_pred C--------CHHHHHHHHhcCCCCCC
Q 042183 161 H--------SSHMVVAILKNCTSVSH 178 (179)
Q Consensus 161 ~--------~~~~~~~Ll~~g~~~~~ 178 (179)
| +.+++++|+++|++++.
T Consensus 265 g~~~~~~~~~~eIvelLL~~gadI~~ 290 (437)
T PHA02795 265 GSVIARRETHLKILEILLREPLSIDC 290 (437)
T ss_pred CCcccccccHHHHHHHHHhCCCCCCc
Confidence 8 46999999999998763
No 28
>PHA02798 ankyrin-like protein; Provisional
Probab=99.86 E-value=6.3e-21 Score=150.35 Aligned_cols=141 Identities=18% Similarity=0.161 Sum_probs=115.7
Q ss_pred ccCCHHHHHHHHcC---ChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCC---HHHHHHHHHhhcccCCchh
Q 042183 28 LQIDPNLFKAAAAG---NLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGH---CDIVSVLIERAKLLQHEDE 101 (179)
Q Consensus 28 ~~~~~~l~~A~~~g---~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~---~~~v~~ll~~~~~~~~~~~ 101 (179)
....+|||.|+..+ +.+.++.|++ .+..++..|..|.| |||+|+..++ .+++++|+++|++++....
T Consensus 107 ~~G~TpLh~a~~~~~~~~~~iv~~Ll~------~Gadvn~~d~~g~t-pL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~ 179 (489)
T PHA02798 107 SDGETPLYCLLSNGYINNLEILLFMIE------NGADTTLLDKDGFT-MLQVYLQSNHHIDIEIIKLLLEKGVDINTHNN 179 (489)
T ss_pred CCcCcHHHHHHHcCCcChHHHHHHHHH------cCCCccccCCCCCc-HHHHHHHcCCcchHHHHHHHHHhCCCcccccC
Confidence 34568899998875 6788888887 67788888899999 9999998887 8889999988877643210
Q ss_pred ----h--------------------------------------h-----------------------hhHHHHhccCCCC
Q 042183 102 ----E--------------------------------------L-----------------------ESGMIRMMNKEKH 116 (179)
Q Consensus 102 ----~--------------------------------------~-----------------------~~~~~~~~~~~g~ 116 (179)
. . ....++.+|..|+
T Consensus 180 ~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~ 259 (489)
T PHA02798 180 KEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGF 259 (489)
T ss_pred cCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCc
Confidence 0 0 0012345778899
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCC
Q 042183 117 TALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVS 177 (179)
Q Consensus 117 t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~ 177 (179)
||||+|+.+|+.+++++|++.|++++ ..|..|.|||++|+. .++.++++.|++++++++
T Consensus 260 TPL~~A~~~~~~~~v~~LL~~GAdin-~~d~~G~TpL~~A~~-~~~~~iv~~lL~~~~~~~ 318 (489)
T PHA02798 260 NPLYYSVSHNNRKIFEYLLQLGGDIN-IITELGNTCLFTAFE-NESKFIFNSILNKKPNKN 318 (489)
T ss_pred cHHHHHHHcCcHHHHHHHHHcCCccc-ccCCCCCcHHHHHHH-cCcHHHHHHHHccCCCHH
Confidence 99999999999999999999999987 899999999999999 999999999999998764
No 29
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.86 E-value=9.6e-21 Score=153.04 Aligned_cols=131 Identities=8% Similarity=-0.026 Sum_probs=113.2
Q ss_pred ccCCHHHHHHHH--cCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCC--HHHHHHHHHhhcccCCchhhh
Q 042183 28 LQIDPNLFKAAA--AGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGH--CDIVSVLIERAKLLQHEDEEL 103 (179)
Q Consensus 28 ~~~~~~l~~A~~--~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~--~~~v~~ll~~~~~~~~~~~~~ 103 (179)
....+|||.|+. .++.++++.|++ .+..++.+|..|.| |||+|+..|+ .+++++|+++|++++.
T Consensus 175 ~~G~TpLH~A~~n~~~~~eIVklLLe------~GADVN~kD~~G~T-PLH~Aa~~g~~~~eIVklLLe~GADVN~----- 242 (764)
T PHA02716 175 KTGYGILHAYLGNMYVDIDILEWLCN------NGVNVNLQNNHLIT-PLHTYLITGNVCASVIKKIIELGGDMDM----- 242 (764)
T ss_pred CCCCcHHHHHHHhccCCHHHHHHHHH------cCCCCCCCCCCCCC-HHHHHHHcCCCCHHHHHHHHHcCCCCCC-----
Confidence 346689998865 467899999987 77889999999999 9999999995 5899999999999888
Q ss_pred hhHHHHhccCCCCcHHHHH-------------------------------------HHcCCHHHHHHHHhcCCCCCCCCC
Q 042183 104 ESGMIRMMNKEKHTALHEA-------------------------------------VFHKIVDVVKILTREDLDYPYSAN 146 (179)
Q Consensus 104 ~~~~~~~~~~~g~t~l~~A-------------------------------------~~~g~~~~~~~Ll~~~~~~~~~~~ 146 (179)
++..|+||||.| +..|+.+++++|++.|++++ .+|
T Consensus 243 -------kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN-~kD 314 (764)
T PHA02716 243 -------KCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLH-YKD 314 (764)
T ss_pred -------CCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCcee-ccC
Confidence 899999999865 45678899999999999986 899
Q ss_pred CCCCCHHHHHHHh-cCCHHHHHHHHhcCCCCCC
Q 042183 147 NYNKTPLCMVAEY-EHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 147 ~~g~tpl~~A~~~-~~~~~~~~~Ll~~g~~~~~ 178 (179)
..|+||||+|+.. .++.+++++|+++|++++.
T Consensus 315 ~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~ 347 (764)
T PHA02716 315 SAGRTCLHQYILRHNISTDIIKLLHEYGNDLNE 347 (764)
T ss_pred CCCCCHHHHHHHHhCCCchHHHHHHHcCCCCcc
Confidence 9999999998641 4688999999999998864
No 30
>PHA03095 ankyrin-like protein; Provisional
Probab=99.86 E-value=1.5e-20 Score=147.57 Aligned_cols=129 Identities=16% Similarity=0.156 Sum_probs=112.1
Q ss_pred ccCCHHHHHHHHcC---ChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcC-CHHHHHHHHHhhcccCCchhhh
Q 042183 28 LQIDPNLFKAAAAG---NLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFG-HCDIVSVLIERAKLLQHEDEEL 103 (179)
Q Consensus 28 ~~~~~~l~~A~~~g---~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g-~~~~v~~ll~~~~~~~~~~~~~ 103 (179)
....+|||.|+..| +.++++.|++ .+..++.++..|.| |||+|+..| ..+++++|+++|++++.
T Consensus 45 ~~g~t~Lh~a~~~~~~~~~~iv~~Ll~------~Gadin~~~~~g~T-pLh~A~~~~~~~~iv~lLl~~ga~in~----- 112 (471)
T PHA03095 45 EYGKTPLHLYLHYSSEKVKDIVRLLLE------AGADVNAPERCGFT-PLHLYLYNATTLDVIKLLIKAGADVNA----- 112 (471)
T ss_pred CCCCCHHHHHHHhcCCChHHHHHHHHH------CCCCCCCCCCCCCC-HHHHHHHcCCcHHHHHHHHHcCCCCCC-----
Confidence 34568999999998 8999999987 77788999999999 999999999 59999999999998877
Q ss_pred hhHHHHhccCCCCcHHHHHH--HcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcC--CHHHHHHHHhcCCCCC
Q 042183 104 ESGMIRMMNKEKHTALHEAV--FHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEH--SSHMVVAILKNCTSVS 177 (179)
Q Consensus 104 ~~~~~~~~~~~g~t~l~~A~--~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~--~~~~~~~Ll~~g~~~~ 177 (179)
++..|.||||+|+ ..++.+++++|++.|++++ ..|..|.||||+|+. .+ ..+++++|+++|++++
T Consensus 113 -------~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~-~~d~~g~tpL~~a~~-~~~~~~~iv~~Ll~~g~~~~ 181 (471)
T PHA03095 113 -------KDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVN-ALDLYGMTPLAVLLK-SRNANVELLRLLIDAGADVY 181 (471)
T ss_pred -------CCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHH-cCCCCHHHHHHHHHcCCCCc
Confidence 8888999999999 5567889999999999976 788899999998887 55 5788999999988764
No 31
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.86 E-value=1.7e-21 Score=145.97 Aligned_cols=121 Identities=25% Similarity=0.307 Sum_probs=114.4
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHH
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIR 109 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~ 109 (179)
..+||-.||..|+++++++|++ .+.++++.|..|.| .||+||..|+.+|+++|++.|++++.
T Consensus 117 NStPLraACfDG~leivKyLvE------~gad~~IanrhGhT-cLmIa~ykGh~~I~qyLle~gADvn~----------- 178 (615)
T KOG0508|consen 117 NSTPLRAACFDGHLEIVKYLVE------HGADPEIANRHGHT-CLMIACYKGHVDIAQYLLEQGADVNA----------- 178 (615)
T ss_pred CCccHHHHHhcchhHHHHHHHH------cCCCCcccccCCCe-eEEeeeccCchHHHHHHHHhCCCcch-----------
Confidence 3489999999999999999998 78888999999999 99999999999999999999999888
Q ss_pred hccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhc
Q 042183 110 MMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKN 172 (179)
Q Consensus 110 ~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~ 172 (179)
++..|+|+||.|+..|+++++++|+.+|+.+ ..|..|.|||..|+. .|+.+++.+|++.
T Consensus 179 -ks~kGNTALH~caEsG~vdivq~Ll~~ga~i--~~d~~GmtPL~~Aa~-tG~~~iVe~L~~~ 237 (615)
T KOG0508|consen 179 -KSYKGNTALHDCAESGSVDIVQLLLKHGAKI--DVDGHGMTPLLLAAV-TGHTDIVERLLQC 237 (615)
T ss_pred -hcccCchHHHhhhhcccHHHHHHHHhCCcee--eecCCCCchHHHHhh-hcchHHHHHHhcC
Confidence 9999999999999999999999999999986 578899999999999 9999999999963
No 32
>PHA02946 ankyin-like protein; Provisional
Probab=99.86 E-value=2.2e-20 Score=145.25 Aligned_cols=141 Identities=13% Similarity=0.149 Sum_probs=114.6
Q ss_pred ccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCC--HHHHHHHHHhhcccCCc-hhh--
Q 042183 28 LQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGH--CDIVSVLIERAKLLQHE-DEE-- 102 (179)
Q Consensus 28 ~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~--~~~v~~ll~~~~~~~~~-~~~-- 102 (179)
....+|||.|++.|+.++++.|++ .+..++.+|..|.| |||+|+..++ .+++++|+++|++++.. ...
T Consensus 70 ~~G~TpLh~Aa~~g~~eiv~lLL~------~GAdin~~d~~g~T-pLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~ 142 (446)
T PHA02946 70 DDGNYPLHIASKINNNRIVAMLLT------HGADPNACDKQHKT-PLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGC 142 (446)
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHH------CcCCCCCCCCCCCC-HHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCC
Confidence 445689999999999999999987 77788999999999 9999988764 78999999999887741 110
Q ss_pred ------------------hhhHHHHhccCCCCcHHHHHHHcCC--HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcC-
Q 042183 103 ------------------LESGMIRMMNKEKHTALHEAVFHKI--VDVVKILTREDLDYPYSANNYNKTPLCMVAEYEH- 161 (179)
Q Consensus 103 ------------------~~~~~~~~~~~~g~t~l~~A~~~g~--~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~- 161 (179)
..+..++.+|..|+||||+|+..++ .+++++|++.|++++ .+|..|.||||+|+. .+
T Consensus 143 tpL~aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin-~~d~~G~TpLH~Aa~-~~~ 220 (446)
T PHA02946 143 GPLLACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPS-KPDHDGNTPLHIVCS-KTV 220 (446)
T ss_pred cHHHHHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHH-cCC
Confidence 1223346678889999999877654 688999999999976 889999999999998 76
Q ss_pred -CHHHHHHHHhcCCCCCC
Q 042183 162 -SSHMVVAILKNCTSVSH 178 (179)
Q Consensus 162 -~~~~~~~Ll~~g~~~~~ 178 (179)
+.+++++|+. |++++.
T Consensus 221 ~~~~iv~lLl~-gadin~ 237 (446)
T PHA02946 221 KNVDIINLLLP-STDVNK 237 (446)
T ss_pred CcHHHHHHHHc-CCCCCC
Confidence 7889998884 787764
No 33
>PHA02946 ankyin-like protein; Provisional
Probab=99.85 E-value=2.2e-20 Score=145.34 Aligned_cols=126 Identities=13% Similarity=0.102 Sum_probs=96.2
Q ss_pred CHHHHHHHH--cCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHH
Q 042183 31 DPNLFKAAA--AGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMI 108 (179)
Q Consensus 31 ~~~l~~A~~--~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~ 108 (179)
.+.||.++. .++.++++.|++ .+..++.+|..|.| |||+|+..|+.+++++|+++|++++.
T Consensus 38 ~~~Lh~~~~~~~~~~~iv~~Ll~------~Gadvn~~d~~G~T-pLh~Aa~~g~~eiv~lLL~~GAdin~---------- 100 (446)
T PHA02946 38 YHILHAYCGIKGLDERFVEELLH------RGYSPNETDDDGNY-PLHIASKINNNRIVAMLLTHGADPNA---------- 100 (446)
T ss_pred ChHHHHHHHhcCCCHHHHHHHHH------CcCCCCccCCCCCC-HHHHHHHcCCHHHHHHHHHCcCCCCC----------
Confidence 467887664 446788999987 67788999999999 99999999999999999999998887
Q ss_pred HhccCCCCcHHHHHHHcCC--HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCC
Q 042183 109 RMMNKEKHTALHEAVFHKI--VDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVS 177 (179)
Q Consensus 109 ~~~~~~g~t~l~~A~~~g~--~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~ 177 (179)
+|..|.||||+|+..++ .+++++|++.|++++...+..|.|||+ |+. .++.+++++|+++|++++
T Consensus 101 --~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~-~~~~~vv~~Ll~~gad~~ 167 (446)
T PHA02946 101 --CDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACT-DPSERVFKKIMSIGFEAR 167 (446)
T ss_pred --CCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHH-CCChHHHHHHHhcccccc
Confidence 77777777777766553 667777777777765445666677775 555 566666666666665543
No 34
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.85 E-value=3.8e-20 Score=151.21 Aligned_cols=106 Identities=19% Similarity=0.170 Sum_probs=85.3
Q ss_pred CcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCC-HHHHHHHHh
Q 042183 58 CPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKI-VDVVKILTR 136 (179)
Q Consensus 58 ~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~-~~~~~~Ll~ 136 (179)
.+..++.+|..|.| |||+|+..|+.+++++|+++|++++. .+..|.||||+|+..+. ..++++|++
T Consensus 364 ~gadin~~d~~G~T-pLh~Aa~~~~~~iv~~Ll~~gad~~~------------~~~~g~T~Lh~A~~~~~~~~~vk~Ll~ 430 (682)
T PHA02876 364 LGANVNARDYCDKT-PIHYAAVRNNVVIINTLLDYGADIEA------------LSQKIGTALHFALCGTNPYMSVKTLID 430 (682)
T ss_pred cCCCCccCCCCCCC-HHHHHHHcCCHHHHHHHHHCCCCccc------------cCCCCCchHHHHHHcCCHHHHHHHHHh
Confidence 56677788888888 88888888888888888888887766 77778888888876655 456788888
Q ss_pred cCCCCCCCCCCCCCCHHHHHHHhcC-CHHHHHHHHhcCCCCCC
Q 042183 137 EDLDYPYSANNYNKTPLCMVAEYEH-SSHMVVAILKNCTSVSH 178 (179)
Q Consensus 137 ~~~~~~~~~~~~g~tpl~~A~~~~~-~~~~~~~Ll~~g~~~~~ 178 (179)
.|++++ .+|..|+||||+|+. .+ +.+++++|+++|++++.
T Consensus 431 ~gadin-~~d~~G~TpLh~Aa~-~~~~~~iv~lLl~~Gad~n~ 471 (682)
T PHA02876 431 RGANVN-SKNKDLSTPLHYACK-KNCKLDVIEMLLDNGADVNA 471 (682)
T ss_pred CCCCCC-cCCCCCChHHHHHHH-hCCcHHHHHHHHHCCCCCCC
Confidence 888876 788888889888888 65 67888888888888764
No 35
>PHA03095 ankyrin-like protein; Provisional
Probab=99.85 E-value=1.8e-20 Score=147.12 Aligned_cols=124 Identities=18% Similarity=0.261 Sum_probs=113.8
Q ss_pred HHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcC---CHHHHHHHHHhhcccCCchhhhhhHHHHh
Q 042183 34 LFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFG---HCDIVSVLIERAKLLQHEDEELESGMIRM 110 (179)
Q Consensus 34 l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g---~~~~v~~ll~~~~~~~~~~~~~~~~~~~~ 110 (179)
...++..++++.++.|++ .+..++..+..|.| |||+|+..+ +.+++++|++.|++++.
T Consensus 18 ~~~~~~~~~~~~v~~Ll~------~ga~vn~~~~~g~t-~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~------------ 78 (471)
T PHA03095 18 YLLNASNVTVEEVRRLLA------AGADVNFRGEYGKT-PLHLYLHYSSEKVKDIVRLLLEAGADVNA------------ 78 (471)
T ss_pred HHHcCCCCCHHHHHHHHH------cCCCcccCCCCCCC-HHHHHHHhcCCChHHHHHHHHHCCCCCCC------------
Confidence 356788889999999988 67888999999999 999999999 99999999999998887
Q ss_pred ccCCCCcHHHHHHHcC-CHHHHHHHHhcCCCCCCCCCCCCCCHHHHHH--HhcCCHHHHHHHHhcCCCCCC
Q 042183 111 MNKEKHTALHEAVFHK-IVDVVKILTREDLDYPYSANNYNKTPLCMVA--EYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 111 ~~~~g~t~l~~A~~~g-~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~--~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
++..|.||||+|+..| +.+++++|++.|++++ ..+..|.||||+|+ . .++.+++++|+++|++++.
T Consensus 79 ~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in-~~~~~g~tpLh~a~~~~-~~~~~iv~~Ll~~gad~~~ 147 (471)
T PHA03095 79 PERCGFTPLHLYLYNATTLDVIKLLIKAGADVN-AKDKVGRTPLHVYLSGF-NINPKVIRLLLRKGADVNA 147 (471)
T ss_pred CCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCC-CCCCCCCCHHHHHhhCC-cCCHHHHHHHHHcCCCCCc
Confidence 8999999999999999 5999999999999986 89999999999999 5 6789999999999998864
No 36
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.85 E-value=2.2e-20 Score=114.64 Aligned_cols=88 Identities=30% Similarity=0.385 Sum_probs=79.2
Q ss_pred HHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHH
Q 042183 74 LLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPL 153 (179)
Q Consensus 74 L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl 153 (179)
||+|++.|+.+++++|++.+.+. +. |.||||+|+..|+.+++++|++.|++++ .++..|+|||
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~---------------~~-~~~~l~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L 63 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADI---------------NL-GNTALHYAAENGNLEIVKLLLENGADIN-SQDKNGNTAL 63 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTT---------------TS-SSBHHHHHHHTTTHHHHHHHHHTTTCTT--BSTTSSBHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCC---------------CC-CCCHHHHHHHcCCHHHHHHHHHhccccc-ccCCCCCCHH
Confidence 79999999999999999987532 22 8899999999999999999999999986 8889999999
Q ss_pred HHHHHhcCCHHHHHHHHhcCCCCCCC
Q 042183 154 CMVAEYEHSSHMVVAILKNCTSVSHR 179 (179)
Q Consensus 154 ~~A~~~~~~~~~~~~Ll~~g~~~~~r 179 (179)
|+|+. +|+.+++++|+++|++++.|
T Consensus 64 ~~A~~-~~~~~~~~~Ll~~g~~~~~~ 88 (89)
T PF12796_consen 64 HYAAE-NGNLEIVKLLLEHGADVNIR 88 (89)
T ss_dssp HHHHH-TTHHHHHHHHHHTTT-TTSS
T ss_pred HHHHH-cCCHHHHHHHHHcCCCCCCc
Confidence 99999 99999999999999999865
No 37
>PHA02795 ankyrin-like protein; Provisional
Probab=99.84 E-value=6.8e-20 Score=139.73 Aligned_cols=111 Identities=13% Similarity=0.008 Sum_probs=90.4
Q ss_pred cCCCCCcHHHHHHHH--cCCHHHHHHHHHhhcccCCchh-h------------------hhhH-HHHhc-----cCCCCc
Q 042183 65 VNAKGDSRSLLVAAK--FGHCDIVSVLIERAKLLQHEDE-E------------------LESG-MIRMM-----NKEKHT 117 (179)
Q Consensus 65 ~~~~g~t~~L~~A~~--~g~~~~v~~ll~~~~~~~~~~~-~------------------~~~~-~~~~~-----~~~g~t 117 (179)
++..++| +||+++. .|+.+++++|+++|++++.... . ..+. ..+.. +..+.+
T Consensus 112 ~~~~~~~-~L~~~~~n~~n~~eiV~~LI~~GADIn~~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t 190 (437)
T PHA02795 112 NCNSVQD-LLLYYLSNAYVEIDIVDFMVDHGAVIYKIECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYT 190 (437)
T ss_pred ccccccH-HHHHHHHhcCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccc
Confidence 5566888 9999999 8999999999999999876321 1 0000 01111 123678
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 118 ALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 118 ~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
++|.|+..++.+++++|+.+|++++ .+|..|.||||+|+. .|+.+++++|+++|++++.
T Consensus 191 ~l~~a~~~~~~eIve~LIs~GADIN-~kD~~G~TpLh~Aa~-~g~~eiVelLL~~GAdIN~ 249 (437)
T PHA02795 191 RGFLVDEPTVLEIYKLCIPYIEDIN-QLDAGGRTLLYRAIY-AGYIDLVSWLLENGANVNA 249 (437)
T ss_pred hhHHHHhcCHHHHHHHHHhCcCCcC-cCCCCCCCHHHHHHH-cCCHHHHHHHHHCCCCCCC
Confidence 8999999999999999999999987 899999999999999 9999999999999999874
No 38
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.84 E-value=4.7e-20 Score=145.59 Aligned_cols=66 Identities=15% Similarity=0.070 Sum_probs=61.1
Q ss_pred HHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCC
Q 042183 108 IRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTS 175 (179)
Q Consensus 108 ~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~ 175 (179)
++.+|..|+||||+|+..|+.+++++|++.|++++ .+|..|.||||+|+. .|+.++++.|++++..
T Consensus 249 vn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin-~~d~~G~TpL~~A~~-~~~~~iv~~LL~~~p~ 314 (494)
T PHA02989 249 INKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIY-NVSKDGDTVLTYAIK-HGNIDMLNRILQLKPG 314 (494)
T ss_pred CCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHH-cCCHHHHHHHHhcCCC
Confidence 35678889999999999999999999999999987 899999999999999 9999999999998754
No 39
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.83 E-value=3e-20 Score=153.52 Aligned_cols=134 Identities=22% Similarity=0.187 Sum_probs=112.3
Q ss_pred cccCCHHHHHHHHcCChHHHHHHHHHH---------------------------HHhhCcccccccCCCCCcHHHHHHHH
Q 042183 27 QLQIDPNLFKAAAAGNLEPFKDMAREE---------------------------ILEICPSLLLQVNAKGDSRSLLVAAK 79 (179)
Q Consensus 27 ~~~~~~~l~~A~~~g~~~~~~~ll~~~---------------------------~~~~~~~~~~~~~~~g~t~~L~~A~~ 79 (179)
....-++||.|+..|+.+.++.+++.+ ++-..+..++.++..|+| |||.||.
T Consensus 471 s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~T-pLh~A~~ 549 (1143)
T KOG4177|consen 471 SKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYT-PLHVAVH 549 (1143)
T ss_pred ccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccc-hHHHHHh
Confidence 344456677777777777777666611 122256677888899999 9999999
Q ss_pred cCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHh
Q 042183 80 FGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEY 159 (179)
Q Consensus 80 ~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~ 159 (179)
+|+.++|++|+++|++.+. +++.|+||||.||.+|+.+|+.+|+++|++++ ..|.+|.|||++|+.
T Consensus 550 ~g~v~~VkfLLe~gAdv~a------------k~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vn-a~d~~g~TpL~iA~~- 615 (1143)
T KOG4177|consen 550 YGNVDLVKFLLEHGADVNA------------KDKLGYTPLHQAAQQGHNDIAELLLKHGASVN-AADLDGFTPLHIAVR- 615 (1143)
T ss_pred cCCchHHHHhhhCCccccc------------cCCCCCChhhHHHHcChHHHHHHHHHcCCCCC-cccccCcchhHHHHH-
Confidence 9999999999999998887 89999999999999999999999999999987 899999999999999
Q ss_pred cCCHHHHHHHHhcCCC
Q 042183 160 EHSSHMVVAILKNCTS 175 (179)
Q Consensus 160 ~~~~~~~~~Ll~~g~~ 175 (179)
.|+.++++.|+..+++
T Consensus 616 lg~~~~~k~l~~~~~~ 631 (1143)
T KOG4177|consen 616 LGYLSVVKLLKVVTAT 631 (1143)
T ss_pred hcccchhhHHHhccCc
Confidence 9999999999988865
No 40
>PHA02798 ankyrin-like protein; Provisional
Probab=99.83 E-value=7.3e-20 Score=144.34 Aligned_cols=125 Identities=13% Similarity=0.104 Sum_probs=105.3
Q ss_pred HHHHHHHH--cCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHc-----CCHHHHHHHHHhhcccCCchhhhh
Q 042183 32 PNLFKAAA--AGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKF-----GHCDIVSVLIERAKLLQHEDEELE 104 (179)
Q Consensus 32 ~~l~~A~~--~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~-----g~~~~v~~ll~~~~~~~~~~~~~~ 104 (179)
++++.+.. .++.++++.|++ .+..++..+..|.| |||.|+.+ +..+++++|+++|++++.
T Consensus 38 ~~~~~yl~~~~~~~~iv~~Ll~------~Gadvn~~d~~g~T-pL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~------ 104 (489)
T PHA02798 38 SIFQKYLQRDSPSTDIVKLFIN------LGANVNGLDNEYST-PLCTILSNIKDYKHMLDIVKILIENGADINK------ 104 (489)
T ss_pred hHHHHHHhCCCCCHHHHHHHHH------CCCCCCCCCCCCCC-hHHHHHHhHHhHHhHHHHHHHHHHCCCCCCC------
Confidence 44443443 447888999987 77788889999999 99998764 668999999999998877
Q ss_pred hHHHHhccCCCCcHHHHHHHcC---CHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCC---HHHHHHHHhcCCCCC
Q 042183 105 SGMIRMMNKEKHTALHEAVFHK---IVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHS---SHMVVAILKNCTSVS 177 (179)
Q Consensus 105 ~~~~~~~~~~g~t~l~~A~~~g---~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~---~~~~~~Ll~~g~~~~ 177 (179)
++..|.||||+|+..+ +.+++++|++.|++++ ..|..|.||||+|+. .++ .+++++|+++|++++
T Consensus 105 ------~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn-~~d~~g~tpL~~a~~-~~~~~~~~vv~~Ll~~gadin 175 (489)
T PHA02798 105 ------KNSDGETPLYCLLSNGYINNLEILLFMIENGADTT-LLDKDGFTMLQVYLQ-SNHHIDIEIIKLLLEKGVDIN 175 (489)
T ss_pred ------CCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCcc-ccCCCCCcHHHHHHH-cCCcchHHHHHHHHHhCCCcc
Confidence 8899999999999875 6899999999999976 889999999999999 887 899999999998875
No 41
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.83 E-value=2.4e-20 Score=127.53 Aligned_cols=124 Identities=19% Similarity=0.198 Sum_probs=106.4
Q ss_pred CHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHh
Q 042183 31 DPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRM 110 (179)
Q Consensus 31 ~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~ 110 (179)
.+++..++.+.+++.+..+.. ..+|..|..|.| ||.+|+.+|+..+|++||..|+++..
T Consensus 130 ~s~~slsVhql~L~~~~~~~~--------n~VN~~De~GfT-pLiWAaa~G~i~vV~fLL~~GAdp~~------------ 188 (296)
T KOG0502|consen 130 WSPLSLSVHQLHLDVVDLLVN--------NKVNACDEFGFT-PLIWAAAKGHIPVVQFLLNSGADPDA------------ 188 (296)
T ss_pred CChhhHHHHHHHHHHHHHHhh--------ccccCccccCch-HhHHHHhcCchHHHHHHHHcCCChhh------------
Confidence 356777777777766654433 467889999999 99999999999999999999998876
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCC
Q 042183 111 MNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVS 177 (179)
Q Consensus 111 ~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~ 177 (179)
..+...++|..|+..|..++|+.|+..+.+++ ..|-+|.|||.+|++ .+|.+|++.|+..|++++
T Consensus 189 lgk~resALsLAt~ggytdiV~lLL~r~vdVN-vyDwNGgTpLlyAvr-gnhvkcve~Ll~sGAd~t 253 (296)
T KOG0502|consen 189 LGKYRESALSLATRGGYTDIVELLLTREVDVN-VYDWNGGTPLLYAVR-GNHVKCVESLLNSGADVT 253 (296)
T ss_pred hhhhhhhhHhHHhcCChHHHHHHHHhcCCCcc-eeccCCCceeeeeec-CChHHHHHHHHhcCCCcc
Confidence 77778899999999999999999999999987 889999999999999 999999999999998875
No 42
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.83 E-value=1.7e-19 Score=142.39 Aligned_cols=128 Identities=16% Similarity=0.173 Sum_probs=89.9
Q ss_pred CHHHHHHHHcCC------hHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHc---CCHHHHHHHHHhhccc-CCch
Q 042183 31 DPNLFKAAAAGN------LEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKF---GHCDIVSVLIERAKLL-QHED 100 (179)
Q Consensus 31 ~~~l~~A~~~g~------~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~---g~~~~v~~ll~~~~~~-~~~~ 100 (179)
.+|||.|+..+. .++++.|++ .+.+++.+|..|.| |||.|+.. ++.+++++|+++|+++ +.
T Consensus 70 ~tpL~~a~~~~~~~~~~~~~iv~~Ll~------~Gadin~~d~~g~t-pL~~a~~~~~~~~~eiv~~Ll~~Gadin~~-- 140 (494)
T PHA02989 70 ETPLCAVLRNREITSNKIKKIVKLLLK------FGADINLKTFNGVS-PIVCFIYNSNINNCDMLRFLLSKGINVNDV-- 140 (494)
T ss_pred CCcHHHHHhccCcchhhHHHHHHHHHH------CCCCCCCCCCCCCc-HHHHHHHhcccCcHHHHHHHHHCCCCcccc--
Confidence 466776665442 456666665 56667777777777 77776654 4677777777777766 45
Q ss_pred hhhhhHHHHhccCCCCcHHHHHHHc--CCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcC----CHHHHHHHHhcCC
Q 042183 101 EELESGMIRMMNKEKHTALHEAVFH--KIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEH----SSHMVVAILKNCT 174 (179)
Q Consensus 101 ~~~~~~~~~~~~~~g~t~l~~A~~~--g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~----~~~~~~~Ll~~g~ 174 (179)
++..|+||||+|+.. ++.+++++|++.|+++....+..|.||||+|+. .+ +.+++++|+++|+
T Consensus 141 ----------~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~-~~~~~~~~~iv~~Ll~~Ga 209 (494)
T PHA02989 141 ----------KNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLR-NDIDVISIKVIKYLIKKGV 209 (494)
T ss_pred ----------cCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHh-cccccccHHHHHHHHhCCC
Confidence 777788888877653 567888888888887653256778888888776 54 7788888888887
Q ss_pred CCCC
Q 042183 175 SVSH 178 (179)
Q Consensus 175 ~~~~ 178 (179)
+++.
T Consensus 210 ~vn~ 213 (494)
T PHA02989 210 NIET 213 (494)
T ss_pred Cccc
Confidence 7653
No 43
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.83 E-value=3.1e-20 Score=153.42 Aligned_cols=140 Identities=24% Similarity=0.251 Sum_probs=120.6
Q ss_pred CCHHHHHHHHcC-ChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhh------
Q 042183 30 IDPNLFKAAAAG-NLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEE------ 102 (179)
Q Consensus 30 ~~~~l~~A~~~g-~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~------ 102 (179)
..+++|.|+..| ..+....++. .+..++..-..|.| |||.|+..|+.+++..+++.++..+...+.
T Consensus 440 G~T~lhvaa~~g~~~~~~~~l~~------~g~~~n~~s~~G~T-~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lh 512 (1143)
T KOG4177|consen 440 GYTPLHVAAKKGRYLQIARLLLQ------YGADPNAVSKQGFT-PLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLH 512 (1143)
T ss_pred CCChhhhhhhcccHhhhhhhHhh------cCCCcchhccccCc-chhhhhccCCchHHHHhhhcCCccCccchhccchhh
Confidence 358899999999 4555544444 78888999999999 999999999999999999988666553333
Q ss_pred ---------------hhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHH
Q 042183 103 ---------------LESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVV 167 (179)
Q Consensus 103 ---------------~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ 167 (179)
..+.+++.++..|.||||.||.+|+..+|++|+++|++++ .++..|+||||.||. .|+.+|+.
T Consensus 513 la~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~-ak~~~G~TPLH~Aa~-~G~~~i~~ 590 (1143)
T KOG4177|consen 513 LAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVN-AKDKLGYTPLHQAAQ-QGHNDIAE 590 (1143)
T ss_pred hhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCcccc-ccCCCCCChhhHHHH-cChHHHHH
Confidence 3345667788889999999999999999999999999987 889999999999999 99999999
Q ss_pred HHHhcCCCCCC
Q 042183 168 AILKNCTSVSH 178 (179)
Q Consensus 168 ~Ll~~g~~~~~ 178 (179)
+|+++|+++|.
T Consensus 591 LLlk~GA~vna 601 (1143)
T KOG4177|consen 591 LLLKHGASVNA 601 (1143)
T ss_pred HHHHcCCCCCc
Confidence 99999999874
No 44
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.82 E-value=4e-19 Score=145.25 Aligned_cols=140 Identities=17% Similarity=0.136 Sum_probs=89.2
Q ss_pred cCCHHHHHHHHcCChH-HHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcC-CHHHHHHHHHhhcccCCchhh----
Q 042183 29 QIDPNLFKAAAAGNLE-PFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFG-HCDIVSVLIERAKLLQHEDEE---- 102 (179)
Q Consensus 29 ~~~~~l~~A~~~g~~~-~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g-~~~~v~~ll~~~~~~~~~~~~---- 102 (179)
...+|||.|+..|+.. +++.|++ .+..++..|..|.| |||+|+..| ..++++.|+..|++++.....
T Consensus 272 ~g~TpLh~Aa~~~~~~~iv~lLl~------~gadin~~d~~g~T-pLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~Tp 344 (682)
T PHA02876 272 CKNTPLHHASQAPSLSRLVPKLLE------RGADVNAKNIKGET-PLYLMAKNGYDTENIRTLIMLGADVNAADRLYITP 344 (682)
T ss_pred CCCCHHHHHHhCCCHHHHHHHHHH------CCCCCCCcCCCCCC-HHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcH
Confidence 3568899999999874 5555555 66677888888999 999999888 578888888888877661110
Q ss_pred ------------------hhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCC-H
Q 042183 103 ------------------LESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHS-S 163 (179)
Q Consensus 103 ------------------~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~-~ 163 (179)
..+..++.+|..|.||||+|+..|+.+++++|++.|+++. ..+..|.||||+|+. .+. .
T Consensus 345 Lh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~-~~~~~g~T~Lh~A~~-~~~~~ 422 (682)
T PHA02876 345 LHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIE-ALSQKIGTALHFALC-GTNPY 422 (682)
T ss_pred HHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcc-ccCCCCCchHHHHHH-cCCHH
Confidence 1111223455556666666666666666666666665544 455555566666655 333 3
Q ss_pred HHHHHHHhcCCCCC
Q 042183 164 HMVVAILKNCTSVS 177 (179)
Q Consensus 164 ~~~~~Ll~~g~~~~ 177 (179)
.++++|+++|++++
T Consensus 423 ~~vk~Ll~~gadin 436 (682)
T PHA02876 423 MSVKTLIDRGANVN 436 (682)
T ss_pred HHHHHHHhCCCCCC
Confidence 44556666665554
No 45
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.82 E-value=1.8e-19 Score=110.54 Aligned_cols=89 Identities=31% Similarity=0.360 Sum_probs=77.1
Q ss_pred HHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccC
Q 042183 34 LFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNK 113 (179)
Q Consensus 34 l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~ 113 (179)
||.|++.|+.++++.|++ .+..++. |.+ |||+|+.+|+.+++++|+++|++++. ++.
T Consensus 1 L~~A~~~~~~~~~~~ll~------~~~~~~~----~~~-~l~~A~~~~~~~~~~~Ll~~g~~~~~------------~~~ 57 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLE------KGADINL----GNT-ALHYAAENGNLEIVKLLLENGADINS------------QDK 57 (89)
T ss_dssp HHHHHHTTTHHHHHHHHH------TTSTTTS----SSB-HHHHHHHTTTHHHHHHHHHTTTCTT-------------BST
T ss_pred CHHHHHcCCHHHHHHHHH------CcCCCCC----CCC-HHHHHHHcCCHHHHHHHHHhcccccc------------cCC
Confidence 789999999999999987 3333333 889 99999999999999999999998887 899
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCC
Q 042183 114 EKHTALHEAVFHKIVDVVKILTREDLDYPYSAN 146 (179)
Q Consensus 114 ~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~ 146 (179)
.|+||||+|+..|+.+++++|++.|++++ .+|
T Consensus 58 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~n 89 (89)
T PF12796_consen 58 NGNTALHYAAENGNLEIVKLLLEHGADVN-IRN 89 (89)
T ss_dssp TSSBHHHHHHHTTHHHHHHHHHHTTT-TT-SS-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcC
Confidence 99999999999999999999999999875 443
No 46
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.81 E-value=6.7e-20 Score=133.50 Aligned_cols=131 Identities=18% Similarity=0.238 Sum_probs=107.8
Q ss_pred CccccCCHHHHHHHHcCChHHHHHHHH----------------------------------HHHHhhCcccccccC-CCC
Q 042183 25 ISQLQIDPNLFKAAAAGNLEPFKDMAR----------------------------------EEILEICPSLLLQVN-AKG 69 (179)
Q Consensus 25 ~~~~~~~~~l~~A~~~g~~~~~~~ll~----------------------------------~~~~~~~~~~~~~~~-~~g 69 (179)
+.....++.||+|+..+++++|+.||+ +.++. .+ ++|.+- .-|
T Consensus 263 laDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~-mg-nVNaKAsQ~g 340 (452)
T KOG0514|consen 263 LADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFK-MG-DVNAKASQHG 340 (452)
T ss_pred hhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHh-cc-Ccchhhhhhc
Confidence 334556788999999999999999998 11111 12 344433 567
Q ss_pred CcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCC
Q 042183 70 DSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTRE-DLDYPYSANNY 148 (179)
Q Consensus 70 ~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~-~~~~~~~~~~~ 148 (179)
.| +|++|+.+|+.++|+.||.+|+++|. +|.+|.|+|++||.+||++++++||.. +++.. ..|.+
T Consensus 341 QT-ALMLAVSHGr~d~vk~LLacgAdVNi------------QDdDGSTALMCA~EHGhkEivklLLA~p~cd~s-LtD~D 406 (452)
T KOG0514|consen 341 QT-ALMLAVSHGRVDMVKALLACGADVNI------------QDDDGSTALMCAAEHGHKEIVKLLLAVPSCDIS-LTDVD 406 (452)
T ss_pred ch-hhhhhhhcCcHHHHHHHHHccCCCcc------------ccCCccHHHhhhhhhChHHHHHHHhccCcccce-eecCC
Confidence 78 99999999999999999999998887 999999999999999999999999987 56655 89999
Q ss_pred CCCHHHHHHHhcCCHHHHHHHHhc
Q 042183 149 NKTPLCMVAEYEHSSHMVVAILKN 172 (179)
Q Consensus 149 g~tpl~~A~~~~~~~~~~~~Ll~~ 172 (179)
|.|+|.+|.. .||.||.-+|..+
T Consensus 407 gSTAl~IAle-agh~eIa~mlYa~ 429 (452)
T KOG0514|consen 407 GSTALSIALE-AGHREIAVMLYAH 429 (452)
T ss_pred CchhhhhHHh-cCchHHHHHHHHH
Confidence 9999999999 9999998888654
No 47
>PHA02741 hypothetical protein; Provisional
Probab=99.81 E-value=6.6e-19 Score=120.49 Aligned_cols=108 Identities=13% Similarity=0.152 Sum_probs=88.4
Q ss_pred ccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCC----HHHHHHHHhc
Q 042183 62 LLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKI----VDVVKILTRE 137 (179)
Q Consensus 62 ~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~----~~~~~~Ll~~ 137 (179)
++.++..|.| +||+|++.|+.++++.|+....... .+..++.+|..|+||||+|+..|+ .+++++|+..
T Consensus 14 ~~~~~~~g~t-~Lh~Aa~~g~~~~v~~l~~~~~~~~------~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~ 86 (169)
T PHA02741 14 IAEKNSEGEN-FFHEAARCGCFDIIARFTPFIRGDC------HAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIEL 86 (169)
T ss_pred hhccccCCCC-HHHHHHHcCCHHHHHHHHHHhccch------hhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHc
Confidence 3557889999 9999999999999999865421000 012344589999999999999999 5889999999
Q ss_pred CCCCCCCCCC-CCCCHHHHHHHhcCCHHHHHHHHh-cCCCCCC
Q 042183 138 DLDYPYSANN-YNKTPLCMVAEYEHSSHMVVAILK-NCTSVSH 178 (179)
Q Consensus 138 ~~~~~~~~~~-~g~tpl~~A~~~~~~~~~~~~Ll~-~g~~~~~ 178 (179)
|++++ .++. .|+||||+|+. .++.+++++|+. .|++++.
T Consensus 87 gadin-~~~~~~g~TpLh~A~~-~~~~~iv~~Ll~~~g~~~~~ 127 (169)
T PHA02741 87 GADIN-AQEMLEGDTALHLAAH-RRDHDLAEWLCCQPGIDLHF 127 (169)
T ss_pred CCCCC-CCCcCCCCCHHHHHHH-cCCHHHHHHHHhCCCCCCCc
Confidence 99986 6774 89999999999 999999999997 4887653
No 48
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.81 E-value=6.7e-19 Score=129.31 Aligned_cols=103 Identities=17% Similarity=0.138 Sum_probs=92.4
Q ss_pred ccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhc----cCCCCcHHHHHHHcCCHHHHHHHHhc
Q 042183 62 LLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMM----NKEKHTALHEAVFHKIVDVVKILTRE 137 (179)
Q Consensus 62 ~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~----~~~g~t~l~~A~~~g~~~~~~~Ll~~ 137 (179)
+..+|..|.+++||.|+..|+.+++++|+++|++++. + +..|.||||+|+..++.+++++|+++
T Consensus 25 ~~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~------------~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~ 92 (300)
T PHA02884 25 IKKKNKICIANILYSSIKFHYTDIIDAILKLGADPEA------------PFPLSENSKTNPLIYAIDCDNDDAAKLLIRY 92 (300)
T ss_pred hhccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccc------------cCcccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 3457889999678888999999999999999998876 5 45899999999999999999999999
Q ss_pred CCCCCCCC-CCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 138 DLDYPYSA-NNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 138 ~~~~~~~~-~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
|++++ .. +..|.||||+|+. .++.+++++|+..|++++.
T Consensus 93 GADVN-~~~~~~g~TpLh~Aa~-~~~~eivklLL~~GAdin~ 132 (300)
T PHA02884 93 GADVN-RYAEEAKITPLYISVL-HGCLKCLEILLSYGADINI 132 (300)
T ss_pred CCCcC-cccCCCCCCHHHHHHH-cCCHHHHHHHHHCCCCCCC
Confidence 99987 54 5679999999999 9999999999999998864
No 49
>PHA02917 ankyrin-like protein; Provisional
Probab=99.81 E-value=8.8e-19 Score=141.57 Aligned_cols=135 Identities=16% Similarity=0.054 Sum_probs=105.1
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHH--HcCCHHHHHHHHHhhcccCCchhh-hhh-HH
Q 042183 32 PNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAA--KFGHCDIVSVLIERAKLLQHEDEE-LES-GM 107 (179)
Q Consensus 32 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~--~~g~~~~v~~ll~~~~~~~~~~~~-~~~-~~ 107 (179)
..++.|+..|+.++++.|++ .+..++..|..|.| |||.|+ ..|+.+++++|+++|++++..... ..+ ..
T Consensus 105 ~~~~~a~~~~~~e~vk~Ll~------~Gadin~~d~~g~T-~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~ 177 (661)
T PHA02917 105 IFSYMKSKNVDVDLIKVLVE------HGFDLSVKCENHRS-VIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAY 177 (661)
T ss_pred hHHHHHhhcCCHHHHHHHHH------cCCCCCccCCCCcc-HHHHHHHccCCCHHHHHHHHHcCCCcccccccccccccc
Confidence 55677888888888888887 78899999999999 999654 578999999999999988651000 000 00
Q ss_pred HHhccCCCCcHHHHHHH-----------cCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCH--HHHHHHHhcCC
Q 042183 108 IRMMNKEKHTALHEAVF-----------HKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSS--HMVVAILKNCT 174 (179)
Q Consensus 108 ~~~~~~~g~t~l~~A~~-----------~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~--~~~~~Ll~~g~ 174 (179)
.......+.||||+|+. +++.+++++|++.|++++ .+|..|.||||+|+. .|+. +++++|++ |+
T Consensus 178 ~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn-~~d~~G~TpLh~A~~-~g~~~~eivk~Li~-g~ 254 (661)
T PHA02917 178 DDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPS-SIDKNYCTALQYYIK-SSHIDIDIVKLLMK-GI 254 (661)
T ss_pred ccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcc-cCCCCCCcHHHHHHH-cCCCcHHHHHHHHh-CC
Confidence 00111234699999986 568999999999999987 899999999999999 9985 79999975 76
Q ss_pred CC
Q 042183 175 SV 176 (179)
Q Consensus 175 ~~ 176 (179)
++
T Consensus 255 d~ 256 (661)
T PHA02917 255 DN 256 (661)
T ss_pred cc
Confidence 54
No 50
>PHA02917 ankyrin-like protein; Provisional
Probab=99.79 E-value=2.8e-18 Score=138.69 Aligned_cols=127 Identities=15% Similarity=0.083 Sum_probs=105.1
Q ss_pred cCCHHHHHHHHc---CChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHH----HHHHHHHhhcccCCchh
Q 042183 29 QIDPNLFKAAAA---GNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCD----IVSVLIERAKLLQHEDE 101 (179)
Q Consensus 29 ~~~~~l~~A~~~---g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~----~v~~ll~~~~~~~~~~~ 101 (179)
...+|||.|+.. |+.+.++.|++ .+..++..+..|.| |||+|+..|+.+ +++.|++.+...+.
T Consensus 31 ~g~t~Lh~a~~~~~~~~~~~v~~Ll~------~ga~v~~~~~~g~T-pL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~--- 100 (661)
T PHA02917 31 FKNNALHAYLFNEHCNNVEVVKLLLD------SGTNPLHKNWRQLT-PLEEYTNSRHVKVNKDIAMALLEATGYSNI--- 100 (661)
T ss_pred CCCcHHHHHHHhhhcCcHHHHHHHHH------CCCCccccCCCCCC-HHHHHHHcCChhHHHHHHHHHHhccCCCCC---
Confidence 356999997665 88999999998 77788889999999 999999999854 56777776543332
Q ss_pred hhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHH--HhcCCHHHHHHHHhcCCCCCC
Q 042183 102 ELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVA--EYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 102 ~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~--~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
.+ ..++++.|+..|+.+++++|++.|++++ .+|..|.|||+.|+ . .|+.+++++|+++|+++++
T Consensus 101 ---------~~--~~~~~~~a~~~~~~e~vk~Ll~~Gadin-~~d~~g~T~L~~~~a~~-~~~~eivklLi~~Ga~vn~ 166 (661)
T PHA02917 101 ---------ND--FNIFSYMKSKNVDVDLIKVLVEHGFDLS-VKCENHRSVIENYVMTD-DPVPEIIDLFIENGCSVLY 166 (661)
T ss_pred ---------CC--cchHHHHHhhcCCHHHHHHHHHcCCCCC-ccCCCCccHHHHHHHcc-CCCHHHHHHHHHcCCCccc
Confidence 22 3367788999999999999999999987 89999999999653 5 7899999999999998853
No 51
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.78 E-value=6.7e-19 Score=120.52 Aligned_cols=123 Identities=19% Similarity=0.103 Sum_probs=109.6
Q ss_pred ccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHH
Q 042183 28 LQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGM 107 (179)
Q Consensus 28 ~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~ 107 (179)
.+.-+||.+|+..|++..|+.|+. .+.+........++ +|.+|++.|..++|++||.++.+++.
T Consensus 158 e~GfTpLiWAaa~G~i~vV~fLL~------~GAdp~~lgk~res-ALsLAt~ggytdiV~lLL~r~vdVNv--------- 221 (296)
T KOG0502|consen 158 EFGFTPLIWAAAKGHIPVVQFLLN------SGADPDALGKYRES-ALSLATRGGYTDIVELLLTREVDVNV--------- 221 (296)
T ss_pred ccCchHhHHHHhcCchHHHHHHHH------cCCChhhhhhhhhh-hHhHHhcCChHHHHHHHHhcCCCcce---------
Confidence 344589999999999999999998 66676777777888 99999999999999999999998877
Q ss_pred HHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhc
Q 042183 108 IRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKN 172 (179)
Q Consensus 108 ~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~ 172 (179)
.|.+|-|||.+|++.+|.+|++-|+..|+++. ..+..|.+++..|+. .|+. +++.++++
T Consensus 222 ---yDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t-~e~dsGy~~mdlAVa-lGyr-~Vqqvie~ 280 (296)
T KOG0502|consen 222 ---YDWNGGTPLLYAVRGNHVKCVESLLNSGADVT-QEDDSGYWIMDLAVA-LGYR-IVQQVIEK 280 (296)
T ss_pred ---eccCCCceeeeeecCChHHHHHHHHhcCCCcc-cccccCCcHHHHHHH-hhhH-HHHHHHHH
Confidence 99999999999999999999999999999987 888999999999999 9977 55555544
No 52
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.77 E-value=3.1e-17 Score=105.99 Aligned_cols=121 Identities=29% Similarity=0.362 Sum_probs=107.9
Q ss_pred cCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHH
Q 042183 29 QIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMI 108 (179)
Q Consensus 29 ~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~ 108 (179)
...++||.|+..|+.+.++.|++ .+...+..+..|.+ |||+|+..+..+++++|++.+...+.
T Consensus 6 ~g~t~l~~a~~~~~~~~i~~li~------~~~~~~~~~~~g~~-~l~~a~~~~~~~~~~~ll~~~~~~~~---------- 68 (126)
T cd00204 6 DGRTPLHLAASNGHLEVVKLLLE------NGADVNAKDNDGRT-PLHLAAKNGHLEIVKLLLEKGADVNA---------- 68 (126)
T ss_pred CCCCHHHHHHHcCcHHHHHHHHH------cCCCCCccCCCCCc-HHHHHHHcCCHHHHHHHHHcCCCccc----------
Confidence 35689999999999999999987 44455778899999 99999999999999999999876655
Q ss_pred HhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHH
Q 042183 109 RMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAIL 170 (179)
Q Consensus 109 ~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll 170 (179)
.+..|.||+|+|+..++.+++++|+..+.+.. ..+..+.||++.|.. .++.+++++|+
T Consensus 69 --~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~-~~~~~~~~~l~~~~~-~~~~~~~~~Ll 126 (126)
T cd00204 69 --RDKDGNTPLHLAARNGNLDVVKLLLKHGADVN-ARDKDGRTPLHLAAK-NGHLEVVKLLL 126 (126)
T ss_pred --cCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHh-cCCHHHHHHhC
Confidence 78889999999999999999999999987765 678899999999999 99999999874
No 53
>PHA02730 ankyrin-like protein; Provisional
Probab=99.77 E-value=7.9e-18 Score=134.21 Aligned_cols=127 Identities=12% Similarity=0.092 Sum_probs=105.2
Q ss_pred CCHHHHHHHHcCC----hHHHHHHHHHHHHhhCcc--cccccCCCCCcHHHHH---HHHcC---------CHHHHHHHHH
Q 042183 30 IDPNLFKAAAAGN----LEPFKDMAREEILEICPS--LLLQVNAKGDSRSLLV---AAKFG---------HCDIVSVLIE 91 (179)
Q Consensus 30 ~~~~l~~A~~~g~----~~~~~~ll~~~~~~~~~~--~~~~~~~~g~t~~L~~---A~~~g---------~~~~v~~ll~ 91 (179)
..+|||.|+..++ .++++.|++ .+. .++.+|..|.| |||. |...+ ..+++++|++
T Consensus 378 G~TpLH~Aa~~nnn~i~~eIvelLIs------~Ga~~dIN~kd~~G~T-~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs 450 (672)
T PHA02730 378 NNYPLHDYFVNNNNIVDVNVVRFIVE------NNGHMAINHVSNNGRL-CMYGLILSRFNNCGYHCYETILIDVFDILSK 450 (672)
T ss_pred CCcHHHHHHHHcCCcchHHHHHHHHH------cCCCccccccccCCCc-hHhHHHHHHhccccccccchhHHHHHHHHHh
Confidence 4588998888875 799988887 443 57778888999 9984 33232 2356899999
Q ss_pred hhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC-CCCCHHHHHHHhc--CCHHHHHH
Q 042183 92 RAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANN-YNKTPLCMVAEYE--HSSHMVVA 168 (179)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~-~g~tpl~~A~~~~--~~~~~~~~ 168 (179)
+|++++. +|..|+||||+|+..++.+++++|++.|++++ ..+. .|.|||++|+. . ++.+++++
T Consensus 451 ~GADINa------------kD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN-~~d~~~g~TaL~~Aa~-~~~~~~eIv~~ 516 (672)
T PHA02730 451 YMDDIDM------------IDNENKTLLYYAVDVNNIQFARRLLEYGASVN-TTSRSIINTAIQKSSY-RRENKTKLVDL 516 (672)
T ss_pred cccchhc------------cCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCC-CCCCcCCcCHHHHHHH-hhcCcHHHHHH
Confidence 9987777 99999999999999999999999999999987 7786 59999999997 5 78999999
Q ss_pred HHhcCCCCC
Q 042183 169 ILKNCTSVS 177 (179)
Q Consensus 169 Ll~~g~~~~ 177 (179)
|+++|++.+
T Consensus 517 LLs~ga~i~ 525 (672)
T PHA02730 517 LLSYHPTLE 525 (672)
T ss_pred HHHcCCCHH
Confidence 999998753
No 54
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.77 E-value=2.1e-18 Score=130.96 Aligned_cols=145 Identities=19% Similarity=0.167 Sum_probs=123.5
Q ss_pred CCccccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhh-
Q 042183 24 EISQLQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEE- 102 (179)
Q Consensus 24 ~~~~~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~- 102 (179)
...+....+.||.+|...+.++|+++++ .+..++..|..|+| |||.|+..|+..++.+|+++|++...-...
T Consensus 67 ~~~n~DglTalhq~~id~~~e~v~~l~e------~ga~Vn~~d~e~wt-Plhaaascg~~~i~~~li~~gA~~~avNsdg 139 (527)
T KOG0505|consen 67 NLCNVDGLTALHQACIDDNLEMVKFLVE------NGANVNAQDNEGWT-PLHAAASCGYLNIVEYLIQHGANLLAVNSDG 139 (527)
T ss_pred cccCCccchhHHHHHhcccHHHHHHHHH------hcCCccccccccCC-cchhhcccccHHHHHHHHHhhhhhhhccCCC
Confidence 4445666799999999999999999998 88899999999999 999999999999999999999765431111
Q ss_pred ----------------------------------------------hhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHh
Q 042183 103 ----------------------------------------------LESGMIRMMNKEKHTALHEAVFHKIVDVVKILTR 136 (179)
Q Consensus 103 ----------------------------------------------~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~ 136 (179)
-.+....+.+..|-|+||+|+..|..++.++|++
T Consensus 140 ~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ 219 (527)
T KOG0505|consen 140 NMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQ 219 (527)
T ss_pred CCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHH
Confidence 1111223444559999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCC
Q 042183 137 EDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVS 177 (179)
Q Consensus 137 ~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~ 177 (179)
.|.++. .+|.+||||||.|+. =|+.+++++|+++|++.+
T Consensus 220 ag~~~~-~~D~dgWtPlHAAA~-Wg~~~~~elL~~~ga~~d 258 (527)
T KOG0505|consen 220 AGYSVN-IKDYDGWTPLHAAAH-WGQEDACELLVEHGADMD 258 (527)
T ss_pred hccCcc-cccccCCCcccHHHH-hhhHhHHHHHHHhhcccc
Confidence 999976 899999999999999 999999999999998765
No 55
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.76 E-value=4.6e-18 Score=120.95 Aligned_cols=141 Identities=23% Similarity=0.198 Sum_probs=109.1
Q ss_pred hhhcccCCCCccccCC---HHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHh
Q 042183 16 ASLLDNNGEISQLQID---PNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIER 92 (179)
Q Consensus 16 ~~~~~~~~~~~~~~~~---~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~ 92 (179)
--|++......+...+ +|||.||+.|+..+++-|+. .+.-+|..+--..| |||+|+..|+.++|..|++.
T Consensus 17 rlwld~tehdln~gddhgfsplhwaakegh~aivemll~------rgarvn~tnmgddt-plhlaaahghrdivqkll~~ 89 (448)
T KOG0195|consen 17 RLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLS------RGARVNSTNMGDDT-PLHLAAAHGHRDIVQKLLSR 89 (448)
T ss_pred EEEecCcccccccccccCcchhhhhhhcccHHHHHHHHh------cccccccccCCCCc-chhhhhhcccHHHHHHHHHH
Confidence 3355554443333322 78999999999999988887 66677777766667 99999999999999999999
Q ss_pred hcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhc
Q 042183 93 AKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKN 172 (179)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~ 172 (179)
.++.+. .+.-|+||||+||..|.-.+++-|+..|+.++ .++..|.|||..|-. .-...+...--++
T Consensus 90 kadvna------------vnehgntplhyacfwgydqiaedli~~ga~v~-icnk~g~tpldkakp-~l~~~l~e~aek~ 155 (448)
T KOG0195|consen 90 KADVNA------------VNEHGNTPLHYACFWGYDQIAEDLISCGAAVN-ICNKKGMTPLDKAKP-MLKNTLLEIAEKH 155 (448)
T ss_pred hcccch------------hhccCCCchhhhhhhcHHHHHHHHHhccceee-ecccCCCCchhhhch-HHHHHHHHHHHHh
Confidence 887777 89999999999999999999999999999987 899999999998865 4333344444445
Q ss_pred CCCCC
Q 042183 173 CTSVS 177 (179)
Q Consensus 173 g~~~~ 177 (179)
|-+++
T Consensus 156 gq~~n 160 (448)
T KOG0195|consen 156 GQSPN 160 (448)
T ss_pred CCCCC
Confidence 65554
No 56
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.76 E-value=6.2e-19 Score=125.35 Aligned_cols=124 Identities=25% Similarity=0.224 Sum_probs=108.3
Q ss_pred HHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccC
Q 042183 34 LFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNK 113 (179)
Q Consensus 34 l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~ 113 (179)
++.-|+.|+.-.|+..++ ....++|..|..|.+ |||+||+.|+..+++.|+++|+..+. .+.
T Consensus 4 if~wcregna~qvrlwld-----~tehdln~gddhgfs-plhwaakegh~aivemll~rgarvn~------------tnm 65 (448)
T KOG0195|consen 4 IFGWCREGNAFQVRLWLD-----DTEHDLNVGDDHGFS-PLHWAAKEGHVAIVEMLLSRGARVNS------------TNM 65 (448)
T ss_pred hhhhhhcCCeEEEEEEec-----CcccccccccccCcc-hhhhhhhcccHHHHHHHHhccccccc------------ccC
Confidence 444567776666655544 344567889999999 99999999999999999999998877 888
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCC
Q 042183 114 EKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVS 177 (179)
Q Consensus 114 ~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~ 177 (179)
..-||||.|+.+||-++|+.|++..+|++ ..+..|.||||+||. -|...++.-|+..|+.++
T Consensus 66 gddtplhlaaahghrdivqkll~~kadvn-avnehgntplhyacf-wgydqiaedli~~ga~v~ 127 (448)
T KOG0195|consen 66 GDDTPLHLAAAHGHRDIVQKLLSRKADVN-AVNEHGNTPLHYACF-WGYDQIAEDLISCGAAVN 127 (448)
T ss_pred CCCcchhhhhhcccHHHHHHHHHHhcccc-hhhccCCCchhhhhh-hcHHHHHHHHHhccceee
Confidence 88999999999999999999999999987 899999999999999 999999999999997664
No 57
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.76 E-value=9.9e-18 Score=114.30 Aligned_cols=103 Identities=10% Similarity=0.200 Sum_probs=86.7
Q ss_pred cccccCCCCCcHHHHHHHHcCCH----HHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHH---HHH
Q 042183 61 LLLQVNAKGDSRSLLVAAKFGHC----DIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDV---VKI 133 (179)
Q Consensus 61 ~~~~~~~~g~t~~L~~A~~~g~~----~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~---~~~ 133 (179)
.++..+.++.+ +||.||+.|+. +++++|++.+...+. +|..|+||||+|+..|+.+. +++
T Consensus 12 ~~~~~~~~~~~-~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~------------~d~~g~t~Lh~Aa~~g~~~~~~~i~~ 78 (166)
T PHA02743 12 GAVEIDEDEQN-TFLRICRTGNIYELMEVAPFISGDGHLLHR------------YDHHGRQCTHMVAWYDRANAVMKIEL 78 (166)
T ss_pred HHhhhccCCCc-HHHHHHHcCCHHHHHHHHHHHhhcchhhhc------------cCCCCCcHHHHHHHhCccCHHHHHHH
Confidence 44557778889 99999999998 566677777765544 89999999999999998654 899
Q ss_pred HHhcCCCCCCCCC-CCCCCHHHHHHHhcCCHHHHHHHHh-cCCCCCC
Q 042183 134 LTREDLDYPYSAN-NYNKTPLCMVAEYEHSSHMVVAILK-NCTSVSH 178 (179)
Q Consensus 134 Ll~~~~~~~~~~~-~~g~tpl~~A~~~~~~~~~~~~Ll~-~g~~~~~ 178 (179)
|++.|++++ .++ ..|.||||+|+. .++.+++++|+. .|++++.
T Consensus 79 Ll~~Gadin-~~d~~~g~TpLh~A~~-~g~~~iv~~Ll~~~gad~~~ 123 (166)
T PHA02743 79 LVNMGADIN-ARELGTGNTLLHIAAS-TKNYELAEWLCRQLGVNLGA 123 (166)
T ss_pred HHHcCCCCC-CCCCCCCCcHHHHHHH-hCCHHHHHHHHhccCCCccC
Confidence 999999986 777 589999999999 999999999995 7887653
No 58
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.76 E-value=1.3e-17 Score=99.07 Aligned_cols=104 Identities=20% Similarity=0.179 Sum_probs=88.3
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhc
Q 042183 32 PNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMM 111 (179)
Q Consensus 32 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~ 111 (179)
..+.+++++|.++-|+.... .+.+++. ...|++ |||+|+-+|..++++||+..|++++. +
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~------~g~nVn~-~~ggR~-plhyAAD~GQl~ilefli~iGA~i~~------------k 63 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVN------EGLNVNE-IYGGRT-PLHYAADYGQLSILEFLISIGANIQD------------K 63 (117)
T ss_pred hhHhhhhccCcHHHHHHHHH------ccccHHH-HhCCcc-cchHhhhcchHHHHHHHHHhccccCC------------c
Confidence 45778999999999988765 3334442 237888 99999999999999999999999988 9
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHH
Q 042183 112 NKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMV 156 (179)
Q Consensus 112 ~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A 156 (179)
|+.|.|||..|++.||.+||++|+++|++.. .+.+.|.+.+..+
T Consensus 64 DKygITPLLsAvwEGH~~cVklLL~~GAdrt-~~~PdG~~~~eat 107 (117)
T KOG4214|consen 64 DKYGITPLLSAVWEGHRDCVKLLLQNGADRT-IHAPDGTALIEAT 107 (117)
T ss_pred cccCCcHHHHHHHHhhHHHHHHHHHcCcccc-eeCCCchhHHhhc
Confidence 9999999999999999999999999999965 7778887766543
No 59
>PHA02730 ankyrin-like protein; Provisional
Probab=99.75 E-value=2.1e-17 Score=131.81 Aligned_cols=131 Identities=13% Similarity=0.076 Sum_probs=110.0
Q ss_pred cCCHHHHHHHHcC---ChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcC--CHHHHHHHHHhhcccCCchhhh
Q 042183 29 QIDPNLFKAAAAG---NLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFG--HCDIVSVLIERAKLLQHEDEEL 103 (179)
Q Consensus 29 ~~~~~l~~A~~~g---~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g--~~~~v~~ll~~~~~~~~~~~~~ 103 (179)
...++||.|+..| +.++++.|++ .++.++.+|..|+| |||+|+..+ +.+++++|++.|+....
T Consensus 40 ~G~TaLh~A~~~~~~~~~eivklLLs------~GAdin~kD~~G~T-PLh~Aa~~~~~~~eIv~~Ll~~~~~~~~----- 107 (672)
T PHA02730 40 RGNNALHCYVSNKCDTDIKIVRLLLS------RGVERLCRNNEGLT-PLGVYSKRKYVKSQIVHLLISSYSNASN----- 107 (672)
T ss_pred CCCcHHHHHHHcCCcCcHHHHHHHHh------CCCCCcccCCCCCC-hHHHHHHcCCCcHHHHHHHHhcCCCCCc-----
Confidence 4569999999997 5899999998 88899999999999 999999976 79999999999765422
Q ss_pred hhHHHHhccCCCCcHHHHHHH--cCCHHHHHHHHh-cCCCCCCCCC----CCCCCHHHHHHHhcCCHHHHHHHHhcCCCC
Q 042183 104 ESGMIRMMNKEKHTALHEAVF--HKIVDVVKILTR-EDLDYPYSAN----NYNKTPLCMVAEYEHSSHMVVAILKNCTSV 176 (179)
Q Consensus 104 ~~~~~~~~~~~g~t~l~~A~~--~g~~~~~~~Ll~-~~~~~~~~~~----~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~ 176 (179)
+..+..+.+||+.++. .++.+++++|+. .+.+++...+ ..|.+|+++|.. .++.+++++|+++|+++
T Consensus 108 -----~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~-~~~~eIvklLi~~g~~v 181 (672)
T PHA02730 108 -----ELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTP-NPRPEVLLWLLKSECYS 181 (672)
T ss_pred -----ccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcC-CCchHHHHHHHHcCCcc
Confidence 1155568899999888 899999999997 5566542211 378999999999 99999999999999988
Q ss_pred C
Q 042183 177 S 177 (179)
Q Consensus 177 ~ 177 (179)
+
T Consensus 182 ~ 182 (672)
T PHA02730 182 T 182 (672)
T ss_pred c
Confidence 4
No 60
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.74 E-value=1.7e-17 Score=111.87 Aligned_cols=108 Identities=11% Similarity=0.166 Sum_probs=83.4
Q ss_pred cccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCH---HHHHHHHhc
Q 042183 61 LLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIV---DVVKILTRE 137 (179)
Q Consensus 61 ~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~---~~~~~Ll~~ 137 (179)
..+.+|..|.| |||+|++.|+. +.++...+..... ....+..+|..|+||||+|+..|+. +++++|++.
T Consensus 9 ~~~~~d~~g~t-pLh~A~~~g~~--~~l~~~~~~~~~~-----~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~ 80 (154)
T PHA02736 9 FASEPDIEGEN-ILHYLCRNGGV--TDLLAFKNAISDE-----NRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEW 80 (154)
T ss_pred HHHhcCCCCCC-HHHHHHHhCCH--HHHHHHHHHhcch-----hHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHc
Confidence 34567889999 99999999983 3444333322111 1123445788999999999999987 468899999
Q ss_pred CCCCCCCCC-CCCCCHHHHHHHhcCCHHHHHHHHhc-CCCCCC
Q 042183 138 DLDYPYSAN-NYNKTPLCMVAEYEHSSHMVVAILKN-CTSVSH 178 (179)
Q Consensus 138 ~~~~~~~~~-~~g~tpl~~A~~~~~~~~~~~~Ll~~-g~~~~~ 178 (179)
|++++ .++ ..|.||||+|+. .++.+++++|+.+ |++++.
T Consensus 81 gadin-~~~~~~g~T~Lh~A~~-~~~~~i~~~Ll~~~g~d~n~ 121 (154)
T PHA02736 81 GADIN-GKERVFGNTPLHIAVY-TQNYELATWLCNQPGVNMEI 121 (154)
T ss_pred CCCcc-ccCCCCCCcHHHHHHH-hCCHHHHHHHHhCCCCCCcc
Confidence 99987 676 589999999999 9999999999984 788753
No 61
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.74 E-value=6e-17 Score=133.61 Aligned_cols=142 Identities=18% Similarity=0.153 Sum_probs=110.4
Q ss_pred cCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHH-HHHHcCCHHHHHHHHHhhcccCCchhh-----
Q 042183 29 QIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLL-VAAKFGHCDIVSVLIERAKLLQHEDEE----- 102 (179)
Q Consensus 29 ~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~-~A~~~g~~~~v~~ll~~~~~~~~~~~~----- 102 (179)
..+..|+.|++.|+.+.++.++++ ..+..++..|..|.| ||| .|+.+++.++++.|++++.. +...+.
T Consensus 16 ~~~~~~l~A~~~g~~~~v~~lL~~----~~~~~in~~d~~G~t-~Lh~~A~~~~~~eiv~lLl~~g~~-~~~G~T~Lh~A 89 (743)
T TIGR00870 16 DEEKAFLPAAERGDLASVYRDLEE----PKKLNINCPDRLGRS-ALFVAAIENENLELTELLLNLSCR-GAVGDTLLHAI 89 (743)
T ss_pred HHHHHHHHHHHcCCHHHHHHHhcc----ccccCCCCcCccchh-HHHHHHHhcChHHHHHHHHhCCCC-CCcChHHHHHH
Confidence 345789999999999999999871 015677888999999 999 88889999999999999851 111111
Q ss_pred -h---------hhH------------HHHh----ccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCC----------
Q 042183 103 -L---------ESG------------MIRM----MNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSAN---------- 146 (179)
Q Consensus 103 -~---------~~~------------~~~~----~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~---------- 146 (179)
. ... ..+. ....|.||||+|+..|+.+++++|+++|++++ .++
T Consensus 90 ~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~-~~~~~~~~~~~~~ 168 (743)
T TIGR00870 90 SLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVP-ARACGDFFVKSQG 168 (743)
T ss_pred HhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCC-cCcCCchhhcCCC
Confidence 0 000 0000 12359999999999999999999999999976 332
Q ss_pred ----CCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 147 ----NYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 147 ----~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
..|.|||+.|+. .|+.+++++|+++|+|++.
T Consensus 169 ~~~~~~g~tpL~~Aa~-~~~~~iv~lLl~~gadin~ 203 (743)
T TIGR00870 169 VDSFYHGESPLNAAAC-LGSPSIVALLSEDPADILT 203 (743)
T ss_pred CCcccccccHHHHHHH-hCCHHHHHHHhcCCcchhh
Confidence 258999999999 9999999999999988764
No 62
>PHA02792 ankyrin-like protein; Provisional
Probab=99.72 E-value=1.3e-16 Score=126.18 Aligned_cols=127 Identities=10% Similarity=0.105 Sum_probs=107.4
Q ss_pred CHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCC--CcHHHHHHHHcCCH---HHHHHHHHhhcccCCchhhhhh
Q 042183 31 DPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKG--DSRSLLVAAKFGHC---DIVSVLIERAKLLQHEDEELES 105 (179)
Q Consensus 31 ~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g--~t~~L~~A~~~g~~---~~v~~ll~~~~~~~~~~~~~~~ 105 (179)
...++.|+..|+.+.++.|++ .+..++.+|..| .| |||+|+..... +++++++++|++++.
T Consensus 340 ~n~~~~Aa~~gn~eIVelLIs------~GADIN~kD~~g~~~T-pLh~A~~n~~~~v~~IlklLIs~GADIN~------- 405 (631)
T PHA02792 340 INKYFQKFDNRDPKVVEYILK------NGNVVVEDDDNIINIM-PLFPTLSIHESDVLSILKLCKPYIDDINK------- 405 (631)
T ss_pred chHHHHHHHcCCHHHHHHHHH------cCCchhhhcCCCCChh-HHHHHHHhccHhHHHHHHHHHhcCCcccc-------
Confidence 345899999999999999998 777888888775 57 99998776654 468899999998877
Q ss_pred HHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHH--hcC-------CHHHHHHHHhcCCCC
Q 042183 106 GMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAE--YEH-------SSHMVVAILKNCTSV 176 (179)
Q Consensus 106 ~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~--~~~-------~~~~~~~Ll~~g~~~ 176 (179)
+|..|+||||+|+..++.+++++|+++|++++ .++..|.|||++|+. ..+ ..++++.|+.+|.++
T Consensus 406 -----kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN-~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i 479 (631)
T PHA02792 406 -----IDKHGRSILYYCIESHSVSLVEWLIDNGADIN-ITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTI 479 (631)
T ss_pred -----ccccCcchHHHHHHcCCHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCCh
Confidence 99999999999999999999999999999987 899999999999964 122 245689999998765
Q ss_pred C
Q 042183 177 S 177 (179)
Q Consensus 177 ~ 177 (179)
+
T Consensus 480 ~ 480 (631)
T PHA02792 480 E 480 (631)
T ss_pred h
Confidence 3
No 63
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.71 E-value=1.5e-16 Score=132.34 Aligned_cols=130 Identities=18% Similarity=0.152 Sum_probs=102.8
Q ss_pred ccccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhh---
Q 042183 26 SQLQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEE--- 102 (179)
Q Consensus 26 ~~~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~--- 102 (179)
......+|||.|+..|+.++++.|++ .+.+++.+|.+|.| |||+|+..|+.+++++|+..++..+.....
T Consensus 554 ~d~~G~TpLh~Aa~~g~~~~v~~Ll~------~gadin~~d~~G~T-pL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L 626 (823)
T PLN03192 554 GDSKGRTPLHIAASKGYEDCVLVLLK------HACNVHIRDANGNT-ALWNAISAKHHKIFRILYHFASISDPHAAGDLL 626 (823)
T ss_pred CCCCCCCHHHHHHHcChHHHHHHHHh------cCCCCCCcCCCCCC-HHHHHHHhCCHHHHHHHHhcCcccCcccCchHH
Confidence 34446799999999999999999987 67788999999999 999888888888887777655433321100
Q ss_pred ----------------hhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCC-CCHHHHHHHhcCCHH
Q 042183 103 ----------------LESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYN-KTPLCMVAEYEHSSH 164 (179)
Q Consensus 103 ----------------~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g-~tpl~~A~~~~~~~~ 164 (179)
..+..++.+|.+|+||||+|+..|+.+++++|+++|++++ ..|..| .+|+.++.. ....+
T Consensus 627 ~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~-~~~~~g~~t~~~l~~~-~~~~~ 703 (823)
T PLN03192 627 CTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVD-KANTDDDFSPTELREL-LQKRE 703 (823)
T ss_pred HHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCC-CCCCCCCCCHHHHHHH-HHHhh
Confidence 2233456689999999999999999999999999999987 778888 899988876 44333
No 64
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.71 E-value=1.4e-17 Score=131.02 Aligned_cols=120 Identities=28% Similarity=0.277 Sum_probs=88.3
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhc
Q 042183 32 PNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMM 111 (179)
Q Consensus 32 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~ 111 (179)
+.||.|+.+|+.++.+.|++ +...+...+..|.+ |||+|+-.|+.++++.++..+...+. .
T Consensus 51 Talhha~Lng~~~is~llle------~ea~ldl~d~kg~~-plhlaaw~g~~e~vkmll~q~d~~na------------~ 111 (854)
T KOG0507|consen 51 TLLHHAVLNGQNQISKLLLD------YEALLDLCDTKGIL-PLHLAAWNGNLEIVKMLLLQTDILNA------------V 111 (854)
T ss_pred hHHHHHHhcCchHHHHHHhc------chhhhhhhhccCcc-eEEehhhcCcchHHHHHHhcccCCCc------------c
Confidence 56777777777777777766 45556666677777 77777777777777777777755554 7
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhc
Q 042183 112 NKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKN 172 (179)
Q Consensus 112 ~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~ 172 (179)
+..|.||||.|+++||.+++.+|+.+|++.. .+|..+.|++.+|++ -|..++++.|++.
T Consensus 112 ~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~-i~nns~~t~ldlA~q-fgr~~Vvq~ll~~ 170 (854)
T KOG0507|consen 112 NIENETPLHLAAQHGHLEVVFYLLKKNADPF-IRNNSKETVLDLASR-FGRAEVVQMLLQK 170 (854)
T ss_pred cccCcCccchhhhhcchHHHHHHHhcCCCcc-ccCcccccHHHHHHH-hhhhHHHHHHhhh
Confidence 7777777777777777777777777777754 777777777777777 7777777777766
No 65
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.70 E-value=1.2e-17 Score=121.87 Aligned_cols=110 Identities=24% Similarity=0.279 Sum_probs=91.7
Q ss_pred cccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhh--------------------------hhhHHHHhc-cC
Q 042183 61 LLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEE--------------------------LESGMIRMM-NK 113 (179)
Q Consensus 61 ~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~--------------------------~~~~~~~~~-~~ 113 (179)
.+|..|.+|.| +|||++.+++.++|+.||+.|.-.-.++.+ .....+|++ .+
T Consensus 260 vVNlaDsNGNT-ALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ 338 (452)
T KOG0514|consen 260 VVNLADSNGNT-ALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQ 338 (452)
T ss_pred HhhhhcCCCCe-eeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhh
Confidence 46889999999 999999999999999999987433222211 122233443 35
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcC
Q 042183 114 EKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNC 173 (179)
Q Consensus 114 ~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g 173 (179)
-|+|+|++|+.+|+.++++.||..|+|++ ..|.+|.|+|.+||. +||.|++++||...
T Consensus 339 ~gQTALMLAVSHGr~d~vk~LLacgAdVN-iQDdDGSTALMCA~E-HGhkEivklLLA~p 396 (452)
T KOG0514|consen 339 HGQTALMLAVSHGRVDMVKALLACGADVN-IQDDDGSTALMCAAE-HGHKEIVKLLLAVP 396 (452)
T ss_pred hcchhhhhhhhcCcHHHHHHHHHccCCCc-cccCCccHHHhhhhh-hChHHHHHHHhccC
Confidence 69999999999999999999999999997 999999999999999 99999999999764
No 66
>PHA02792 ankyrin-like protein; Provisional
Probab=99.70 E-value=1.2e-16 Score=126.47 Aligned_cols=138 Identities=9% Similarity=0.021 Sum_probs=113.5
Q ss_pred ccccCCHHHHH-HHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHH-cCCHHHHHHHHHhhcccCCchhh-
Q 042183 26 SQLQIDPNLFK-AAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAK-FGHCDIVSVLIERAKLLQHEDEE- 102 (179)
Q Consensus 26 ~~~~~~~~l~~-A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~-~g~~~~v~~ll~~~~~~~~~~~~- 102 (179)
.+-....++|+ |+..|++|.++.|++ .+++++..+..|.+ |+|+|+. .++.+++++|+++|+++......
T Consensus 67 ~n~~~~~~~~~~~s~n~~lElvk~LI~------~GAdvN~~~n~~~~-~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g 139 (631)
T PHA02792 67 KNINDFDIFEYLCSDNIDIELLKLLIS------KGLEINSIKNGINI-VEKYATTSNPNVDVFKLLLDKGIPTCSNIQYG 139 (631)
T ss_pred CccCCccHHHHHHHhcccHHHHHHHHH------cCCCcccccCCCCc-ceeEeecCCCChHHHHHHHHCCCCcccccccC
Confidence 33333346766 777889999999998 78899999888889 9999966 69999999999999874331110
Q ss_pred -----------------------hhhHHHHhccCCCCcHHHHHHHcC-------CHHHHHHHHhcCCCCCCCCCCCCCCH
Q 042183 103 -----------------------LESGMIRMMNKEKHTALHEAVFHK-------IVDVVKILTREDLDYPYSANNYNKTP 152 (179)
Q Consensus 103 -----------------------~~~~~~~~~~~~g~t~l~~A~~~g-------~~~~~~~Ll~~~~~~~~~~~~~g~tp 152 (179)
.-+..++..+..|.||||+|+..+ +.+++++|+.+|++++ ..|..|.||
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~-~~d~~g~t~ 218 (631)
T PHA02792 140 YKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMR-YYTYREHTT 218 (631)
T ss_pred cchhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcC-ccCCCCChH
Confidence 112245678889999999999999 8999999999999987 789999999
Q ss_pred HHHHHHhcC--CHHHHHHHHhc
Q 042183 153 LCMVAEYEH--SSHMVVAILKN 172 (179)
Q Consensus 153 l~~A~~~~~--~~~~~~~Ll~~ 172 (179)
||+|+. +. ..|++++|++.
T Consensus 219 l~~~~~-~~~i~~ei~~~L~~~ 239 (631)
T PHA02792 219 LYYYVD-KCDIKREIFDALFDS 239 (631)
T ss_pred HHHHHH-cccchHHHHHHHHhc
Confidence 999999 88 88999999874
No 67
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.70 E-value=8.6e-17 Score=106.46 Aligned_cols=93 Identities=20% Similarity=0.215 Sum_probs=84.7
Q ss_pred HHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCH
Q 042183 73 SLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTP 152 (179)
Q Consensus 73 ~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tp 152 (179)
.+.+|+..+...-|+.||+..++ .++.+|.+|.||||.|+..||.+|++.|+..|++.. .+...||||
T Consensus 66 l~lwaae~nrl~eV~~lL~e~an-----------~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~-a~T~~GWTP 133 (228)
T KOG0512|consen 66 LLLWAAEKNRLTEVQRLLSEKAN-----------HVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKE-AKTNEGWTP 133 (228)
T ss_pred HHHHHHhhccHHHHHHHHHhccc-----------cccccccccccHHHHHHhcCchHHHHHHHHccCCcc-cccccCccc
Confidence 46789999999999999987653 345699999999999999999999999999999976 899999999
Q ss_pred HHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 153 LCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 153 l~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
||.||. -.+.+|+-+|+++|+|++.
T Consensus 134 LhSAck-WnN~~va~~LLqhgaDVnA 158 (228)
T KOG0512|consen 134 LHSACK-WNNFEVAGRLLQHGADVNA 158 (228)
T ss_pred hhhhhc-ccchhHHHHHHhccCcccc
Confidence 999999 9999999999999999874
No 68
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.68 E-value=1.2e-15 Score=108.16 Aligned_cols=123 Identities=24% Similarity=0.268 Sum_probs=112.1
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCC-----HHHHHHHHHhhc---ccCCchh
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGH-----CDIVSVLIERAK---LLQHEDE 101 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~-----~~~v~~ll~~~~---~~~~~~~ 101 (179)
...+++.++..++.+.+..++. .+..++.++..|.| |||+|+..++ .+++++|++.|+ ....
T Consensus 73 ~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~g~t-~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~--- 142 (235)
T COG0666 73 GRLPLHSAASKGDDKIVKLLLA------SGADVNAKDADGDT-PLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNL--- 142 (235)
T ss_pred ccCHHHHHHHcCcHHHHHHHHH------cCCCcccccCCCCc-HHHHHHhcCCcccchHHHHHHHHHcCCCCCCccc---
Confidence 4577999999999999988876 66677899999999 9999999999 999999999999 4444
Q ss_pred hhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcC
Q 042183 102 ELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNC 173 (179)
Q Consensus 102 ~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g 173 (179)
++..|+||||+|+..|+.++++.|++.|+++. ..+..|.|++++|+. .++.++++.+++.+
T Consensus 143 ---------~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~-~~~~~g~t~l~~a~~-~~~~~~~~~l~~~~ 203 (235)
T COG0666 143 ---------RDEDGNTPLHWAALNGDADIVELLLEAGADPN-SRNSYGVTALDPAAK-NGRIELVKLLLDKG 203 (235)
T ss_pred ---------cCCCCCchhHHHHHcCchHHHHHHHhcCCCCc-ccccCCCcchhhhcc-cchHHHHHHHHhcC
Confidence 69999999999999999999999999999976 789999999999999 99999999999864
No 69
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.68 E-value=1.6e-16 Score=120.96 Aligned_cols=119 Identities=24% Similarity=0.154 Sum_probs=101.8
Q ss_pred HHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccC
Q 042183 34 LFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNK 113 (179)
Q Consensus 34 l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~ 113 (179)
|..|+..|.+|.|+..+. .-.+....|..|.| +||-|+..||.+||+||++.|++++. .|.
T Consensus 554 LLDaaLeGEldlVq~~i~------ev~DpSqpNdEGIT-aLHNAiCaghyeIVkFLi~~ganVNa------------~DS 614 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIY------EVTDPSQPNDEGIT-ALHNAICAGHYEIVKFLIEFGANVNA------------ADS 614 (752)
T ss_pred HHhhhhcchHHHHHHHHH------hhcCCCCCCccchh-HHhhhhhcchhHHHHHHHhcCCcccC------------ccC
Confidence 788999999999999887 23355678889999 99999999999999999999999988 999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHh-cCCHHHHHHHHh
Q 042183 114 EKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEY-EHSSHMVVAILK 171 (179)
Q Consensus 114 ~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~-~~~~~~~~~Ll~ 171 (179)
+||||||+|+.-+++.+++.|++.|+.+--..=.++.|+...+-.+ -|..+|.+||..
T Consensus 615 dGWTPLHCAASCNnv~~ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 615 DGWTPLHCAASCNNVPMCKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG 673 (752)
T ss_pred CCCchhhhhhhcCchHHHHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence 9999999999999999999999999886423445678887776431 677889999864
No 70
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.67 E-value=1.8e-15 Score=97.59 Aligned_cols=97 Identities=26% Similarity=0.393 Sum_probs=88.4
Q ss_pred cCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCC
Q 042183 65 VNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYS 144 (179)
Q Consensus 65 ~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~ 144 (179)
+|.+|.| |||+|+..++.+++++|+..+...+. .+..|.||+|.|+..+..+++++|++.++... .
T Consensus 3 ~~~~g~t-~l~~a~~~~~~~~i~~li~~~~~~~~------------~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~-~ 68 (126)
T cd00204 3 RDEDGRT-PLHLAASNGHLEVVKLLLENGADVNA------------KDNDGRTPLHLAAKNGHLEIVKLLLEKGADVN-A 68 (126)
T ss_pred cCcCCCC-HHHHHHHcCcHHHHHHHHHcCCCCCc------------cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc-c
Confidence 5678999 99999999999999999999987655 88899999999999999999999999998765 7
Q ss_pred CCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCC
Q 042183 145 ANNYNKTPLCMVAEYEHSSHMVVAILKNCTSV 176 (179)
Q Consensus 145 ~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~ 176 (179)
.+..|.||+|+|+. .++.+++++|+++|.++
T Consensus 69 ~~~~~~~~l~~a~~-~~~~~~~~~L~~~~~~~ 99 (126)
T cd00204 69 RDKDGNTPLHLAAR-NGNLDVVKLLLKHGADV 99 (126)
T ss_pred cCCCCCCHHHHHHH-cCcHHHHHHHHHcCCCC
Confidence 78899999999999 99999999999988544
No 71
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.67 E-value=1.3e-16 Score=125.61 Aligned_cols=106 Identities=22% Similarity=0.192 Sum_probs=95.6
Q ss_pred CcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhc
Q 042183 58 CPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTRE 137 (179)
Q Consensus 58 ~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~ 137 (179)
.+..++..|..|.| +||.||.+|+.+++++|+++.+.... .+..|.+|||+|++.|+.++++.|+.+
T Consensus 38 rsds~n~qd~~gfT-alhha~Lng~~~is~llle~ea~ldl------------~d~kg~~plhlaaw~g~~e~vkmll~q 104 (854)
T KOG0507|consen 38 RSDSHNLQDYSGFT-LLHHAVLNGQNQISKLLLDYEALLDL------------CDTKGILPLHLAAWNGNLEIVKMLLLQ 104 (854)
T ss_pred CCccccccCccchh-HHHHHHhcCchHHHHHHhcchhhhhh------------hhccCcceEEehhhcCcchHHHHHHhc
Confidence 45667888999999 99999999999999999999775544 888899999999999999999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 138 DLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 138 ~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
+...+ ..+..|.||||.|+. +||.+++.+|+++|+|+.-
T Consensus 105 ~d~~n-a~~~e~~tplhlaaq-hgh~dvv~~Ll~~~adp~i 143 (854)
T KOG0507|consen 105 TDILN-AVNIENETPLHLAAQ-HGHLEVVFYLLKKNADPFI 143 (854)
T ss_pred ccCCC-cccccCcCccchhhh-hcchHHHHHHHhcCCCccc
Confidence 85554 889999999999999 9999999999999998743
No 72
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.67 E-value=2.9e-16 Score=129.62 Aligned_cols=124 Identities=22% Similarity=0.095 Sum_probs=103.2
Q ss_pred cCCHHHHHHHHcCChHHHHHHHHHHHHhhCccccccc--------------CCCCCcHHHHHHHHcCCHHHHHHHHHhhc
Q 042183 29 QIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQV--------------NAKGDSRSLLVAAKFGHCDIVSVLIERAK 94 (179)
Q Consensus 29 ~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~--------------~~~g~t~~L~~A~~~g~~~~v~~ll~~~~ 94 (179)
...+|||.|+..|+.++++.|++ .+..++.+ ...|.+ |||.|+..|+.+++++|+++|+
T Consensus 127 ~G~TpLhlAa~~~~~eiVklLL~------~GAdv~~~~~~~~~~~~~~~~~~~~g~t-pL~~Aa~~~~~~iv~lLl~~ga 199 (743)
T TIGR00870 127 PGITALHLAAHRQNYEIVKLLLE------RGASVPARACGDFFVKSQGVDSFYHGES-PLNAAACLGSPSIVALLSEDPA 199 (743)
T ss_pred CCCcHHHHHHHhCCHHHHHHHHh------CCCCCCcCcCCchhhcCCCCCccccccc-HHHHHHHhCCHHHHHHHhcCCc
Confidence 35699999999999999999998 45555533 236899 9999999999999999999998
Q ss_pred ccCCchhhhhhHHHHhccCCCCcHHHHHHHcC---------CHHHHHHHHhcCCCCC------CCCCCCCCCHHHHHHHh
Q 042183 95 LLQHEDEELESGMIRMMNKEKHTALHEAVFHK---------IVDVVKILTREDLDYP------YSANNYNKTPLCMVAEY 159 (179)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g---------~~~~~~~Ll~~~~~~~------~~~~~~g~tpl~~A~~~ 159 (179)
+++. +|..|+||||+|+..+ ...+.++++..++... ...|..|.|||++|+.
T Consensus 200 din~------------~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~- 266 (743)
T TIGR00870 200 DILT------------ADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAK- 266 (743)
T ss_pred chhh------------HhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhh-
Confidence 7766 8999999999999987 2346677776654431 2578899999999999
Q ss_pred cCCHHHHHHHHhc
Q 042183 160 EHSSHMVVAILKN 172 (179)
Q Consensus 160 ~~~~~~~~~Ll~~ 172 (179)
.|+.+++++|++.
T Consensus 267 ~g~~~l~~lLL~~ 279 (743)
T TIGR00870 267 EGRIVLFRLKLAI 279 (743)
T ss_pred cCCccHHHHHHHH
Confidence 9999999999984
No 73
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.67 E-value=4.5e-16 Score=92.62 Aligned_cols=90 Identities=20% Similarity=0.195 Sum_probs=80.9
Q ss_pred HHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCH
Q 042183 73 SLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTP 152 (179)
Q Consensus 73 ~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tp 152 (179)
.+.+++++|..+-|+..+..|-+.+. .. .|.+|||+|+-+|+.++++||+..|+++. .+|..|-||
T Consensus 5 ~~~W~vkNG~~DeVk~~v~~g~nVn~------------~~-ggR~plhyAAD~GQl~ilefli~iGA~i~-~kDKygITP 70 (117)
T KOG4214|consen 5 SVAWNVKNGEIDEVKQSVNEGLNVNE------------IY-GGRTPLHYAADYGQLSILEFLISIGANIQ-DKDKYGITP 70 (117)
T ss_pred hHhhhhccCcHHHHHHHHHccccHHH------------Hh-CCcccchHhhhcchHHHHHHHHHhccccC-CccccCCcH
Confidence 57789999999999998888865543 43 78999999999999999999999999987 899999999
Q ss_pred HHHHHHhcCCHHHHHHHHhcCCCCC
Q 042183 153 LCMVAEYEHSSHMVVAILKNCTSVS 177 (179)
Q Consensus 153 l~~A~~~~~~~~~~~~Ll~~g~~~~ 177 (179)
|..|++ -||.+|+++|+++|+|-.
T Consensus 71 LLsAvw-EGH~~cVklLL~~GAdrt 94 (117)
T KOG4214|consen 71 LLSAVW-EGHRDCVKLLLQNGADRT 94 (117)
T ss_pred HHHHHH-HhhHHHHHHHHHcCcccc
Confidence 999999 999999999999998753
No 74
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.66 E-value=4.5e-16 Score=118.45 Aligned_cols=127 Identities=19% Similarity=0.224 Sum_probs=111.8
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhc
Q 042183 32 PNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMM 111 (179)
Q Consensus 32 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~ 111 (179)
-.+..|+..|+.+-+..|+. .+...+..+.+|.| +||.+|...+.+||++|+++|++++. .
T Consensus 42 a~~l~A~~~~d~~ev~~ll~------~ga~~~~~n~DglT-alhq~~id~~~e~v~~l~e~ga~Vn~------------~ 102 (527)
T KOG0505|consen 42 AVFLEACSRGDLEEVRKLLN------RGASPNLCNVDGLT-ALHQACIDDNLEMVKFLVENGANVNA------------Q 102 (527)
T ss_pred HHHHhccccccHHHHHHHhc------cCCCccccCCccch-hHHHHHhcccHHHHHHHHHhcCCccc------------c
Confidence 44888999999999999987 44566889999999 99999999999999999999998888 9
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCC------------------------------------------------
Q 042183 112 NKEKHTALHEAVFHKIVDVVKILTREDLDYPY------------------------------------------------ 143 (179)
Q Consensus 112 ~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~------------------------------------------------ 143 (179)
|..||||||.|+.-|+..++++|+..|+++..
T Consensus 103 d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~ 182 (527)
T KOG0505|consen 103 DNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDAR 182 (527)
T ss_pred ccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHH
Confidence 99999999999999999999999999886430
Q ss_pred ----------CCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 144 ----------SANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 144 ----------~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
..+..|-|.||+|+. +|..+++.+|++.|.+++.
T Consensus 183 q~l~~G~~~d~~~~rG~T~lHvAaa-~Gy~e~~~lLl~ag~~~~~ 226 (527)
T KOG0505|consen 183 QWLNAGAELDARHARGATALHVAAA-NGYTEVAALLLQAGYSVNI 226 (527)
T ss_pred HHHhccccccccccccchHHHHHHh-hhHHHHHHHHHHhccCccc
Confidence 011157899999999 9999999999999988753
No 75
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.65 E-value=2.5e-15 Score=106.93 Aligned_cols=121 Identities=21% Similarity=0.122 Sum_probs=109.3
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHH
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIR 109 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~ 109 (179)
..++|..++..|+.+....|++ ....++.+|..|.+ +|..|+..|+.++++.|++.|+++|.
T Consensus 12 ~~~~Lle~i~Kndt~~a~~LLs------~vr~vn~~D~sGMs-~LahAaykGnl~~v~lll~~gaDvN~----------- 73 (396)
T KOG1710|consen 12 PKSPLLEAIDKNDTEAALALLS------TVRQVNQRDPSGMS-VLAHAAYKGNLTLVELLLELGADVND----------- 73 (396)
T ss_pred hhhHHHHHHccCcHHHHHHHHH------HhhhhhccCCCccc-HHHHHHhcCcHHHHHHHHHhCCCcCc-----------
Confidence 5588999999999999999987 34457899999999 99999999999999999999999887
Q ss_pred hccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHH
Q 042183 110 MMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAIL 170 (179)
Q Consensus 110 ~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll 170 (179)
.+...+.||||+|+..|+.++.+.|++.|+... ..|.-|+|+-.+|+. -|+.+||..+=
T Consensus 74 ~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~-~vNsvgrTAaqmAAF-VG~H~CV~iIN 132 (396)
T KOG1710|consen 74 KQHGTLYTPLMFAALSGNQDVCRLLLDAGARMY-LVNSVGRTAAQMAAF-VGHHECVAIIN 132 (396)
T ss_pred ccccccccHHHHHHHcCCchHHHHHHhccCccc-cccchhhhHHHHHHH-hcchHHHHHHh
Confidence 356678999999999999999999999999864 888999999999999 99999987763
No 76
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.61 E-value=3.4e-15 Score=82.72 Aligned_cols=54 Identities=26% Similarity=0.335 Sum_probs=45.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHH
Q 042183 115 KHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAIL 170 (179)
Q Consensus 115 g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll 170 (179)
|.||||+|+..|+.+++++|++.|.+++ ..|.+|.||||+|+. .|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din-~~d~~g~t~lh~A~~-~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADIN-AQDEDGRTPLHYAAK-NGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT--B-TTS--HHHHHHH-TT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHH-ccCHHHHHHHC
Confidence 6899999999999999999999999987 779999999999999 99999999986
No 77
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.60 E-value=9.9e-15 Score=118.70 Aligned_cols=86 Identities=22% Similarity=0.190 Sum_probs=82.3
Q ss_pred HHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCH
Q 042183 73 SLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTP 152 (179)
Q Consensus 73 ~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tp 152 (179)
.|+.|+..|+.+++++|++.|++++. +|..|+||||+|+..|+.+++++|++.|++++ .+|..|.||
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadin~------------~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn-~~d~~G~Tp 151 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADPNC------------RDYDGRTPLHIACANGHVQVVRVLLEFGADPT-LLDKDGKTP 151 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCC------------cCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCC-CCCCCCCCH
Confidence 48899999999999999999998887 99999999999999999999999999999986 899999999
Q ss_pred HHHHHHhcCCHHHHHHHHhc
Q 042183 153 LCMVAEYEHSSHMVVAILKN 172 (179)
Q Consensus 153 l~~A~~~~~~~~~~~~Ll~~ 172 (179)
||+|+. .|+.+++++|+++
T Consensus 152 Lh~A~~-~g~~~iv~~Ll~~ 170 (664)
T PTZ00322 152 LELAEE-NGFREVVQLLSRH 170 (664)
T ss_pred HHHHHH-CCcHHHHHHHHhC
Confidence 999999 9999999999998
No 78
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.60 E-value=1e-14 Score=115.98 Aligned_cols=129 Identities=19% Similarity=0.169 Sum_probs=109.1
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHh---hCccccccc--------------CCCCCcHHHHHHHHcCCHHHHHHHHHh
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILE---ICPSLLLQV--------------NAKGDSRSLLVAAKFGHCDIVSVLIER 92 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~---~~~~~~~~~--------------~~~g~t~~L~~A~~~g~~~~v~~ll~~ 92 (179)
..++||.|+.+.+.+.|+.|++.+..- .++...... -..|+. ||-.||.-++.+++++|+++
T Consensus 184 GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEy-PLSfAAC~nq~eivrlLl~~ 262 (782)
T KOG3676|consen 184 GQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEY-PLSFAACTNQPEIVRLLLAH 262 (782)
T ss_pred CcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccC-chHHHHHcCCHHHHHHHHhc
Confidence 458999999999999999999821100 011111111 235889 99999999999999999999
Q ss_pred hcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCC--CCCCCCCCCCCHHHHHHHhcCCHHHHHHHH
Q 042183 93 AKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLD--YPYSANNYNKTPLCMVAEYEHSSHMVVAIL 170 (179)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~--~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll 170 (179)
+++++. +|..|+|.||..+-+-..++.+++++.|+. .. ..|..|.|||-+|+. .|..++.+.++
T Consensus 263 gAd~~a------------qDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~-v~N~qgLTPLtLAak-lGk~emf~~il 328 (782)
T KOG3676|consen 263 GADPNA------------QDSNGNTVLHMLVIHFVTEMYDLALELGANALEH-VRNNQGLTPLTLAAK-LGKKEMFQHIL 328 (782)
T ss_pred CCCCCc------------cccCCChHHHHHHHHHHHHHHHHHHhcCCCcccc-ccccCCCChHHHHHH-hhhHHHHHHHH
Confidence 999988 999999999999999889999999999988 54 899999999999999 99999999999
Q ss_pred hcC
Q 042183 171 KNC 173 (179)
Q Consensus 171 ~~g 173 (179)
++.
T Consensus 329 e~~ 331 (782)
T KOG3676|consen 329 ERR 331 (782)
T ss_pred Hhh
Confidence 983
No 79
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.60 E-value=5.6e-15 Score=81.88 Aligned_cols=54 Identities=31% Similarity=0.451 Sum_probs=45.5
Q ss_pred CCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHH
Q 042183 69 GDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILT 135 (179)
Q Consensus 69 g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll 135 (179)
|.| |||+|+..|+.+++++|++++.+++. +|.+|.||||+|+..|+.+++++|+
T Consensus 1 g~t-~lh~A~~~g~~~~~~~Ll~~~~din~------------~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRT-PLHWAARSGNLEIVKLLLEHGADINA------------QDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSB-HHHHHHHTT-HHHHHHHHHTTSGTT-------------B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CCh-HHHHHHHhCCHHHHHHHHHCCCCCCC------------CCCCCCCHHHHHHHccCHHHHHHHC
Confidence 678 99999999999999999999998877 8999999999999999999999986
No 80
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.59 E-value=1.2e-14 Score=118.24 Aligned_cols=106 Identities=22% Similarity=0.200 Sum_probs=93.3
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhc
Q 042183 32 PNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMM 111 (179)
Q Consensus 32 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~ 111 (179)
..|+.|+..|+.+.++.|++ .+..++.+|..|.| |||+|+.+|+.+++++|+++|++++. +
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~------~Gadin~~d~~G~T-pLh~Aa~~g~~eiv~~LL~~Gadvn~------------~ 144 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLT------GGADPNCRDYDGRT-PLHIACANGHVQVVRVLLEFGADPTL------------L 144 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHH------CCCCCCCcCCCCCc-HHHHHHHCCCHHHHHHHHHCCCCCCC------------C
Confidence 35889999999999999987 67788999999999 99999999999999999999998887 9
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHhc-------CCCCCCCCCCCCCCHHHHHH
Q 042183 112 NKEKHTALHEAVFHKIVDVVKILTRE-------DLDYPYSANNYNKTPLCMVA 157 (179)
Q Consensus 112 ~~~g~t~l~~A~~~g~~~~~~~Ll~~-------~~~~~~~~~~~g~tpl~~A~ 157 (179)
|..|.||||+|+..|+.+++++|+++ +++.. ..+..|.+|+..+.
T Consensus 145 d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~ga~~~-~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 145 DKDGKTPLELAEENGFREVVQLLSRHSQCHFELGANAK-PDSFTGKPPSLEDS 196 (664)
T ss_pred CCCCCCHHHHHHHCCcHHHHHHHHhCCCcccccCCCCC-ccccCCCCccchhh
Confidence 99999999999999999999999998 66654 56666766655444
No 81
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.57 E-value=3.5e-15 Score=83.19 Aligned_cols=47 Identities=26% Similarity=0.270 Sum_probs=31.4
Q ss_pred HhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHH
Q 042183 109 RMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMV 156 (179)
Q Consensus 109 ~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A 156 (179)
+.+|..|.||||+|+.+|+.+++++|++.|+++. .+|..|+|||++|
T Consensus 10 n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~-~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 10 NAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPN-AKDKDGQTPLHYA 56 (56)
T ss_dssp T---TTS--HHHHHHHHT-HHHHHHHHHCT--TT----TTS--HHHH-
T ss_pred cCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCC-CCcCCCCCHHHhC
Confidence 4499999999999999999999999999999987 9999999999987
No 82
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.53 E-value=4.9e-14 Score=107.60 Aligned_cols=89 Identities=28% Similarity=0.274 Sum_probs=82.4
Q ss_pred HHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHH
Q 042183 74 LLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPL 153 (179)
Q Consensus 74 L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl 153 (179)
|.-|+..|..++|+-.+..-.++.. .+..|.|+||-|+..||.+||+||++.|++++ ..|.+|||||
T Consensus 554 LLDaaLeGEldlVq~~i~ev~DpSq------------pNdEGITaLHNAiCaghyeIVkFLi~~ganVN-a~DSdGWTPL 620 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVTDPSQ------------PNDEGITALHNAICAGHYEIVKFLIEFGANVN-AADSDGWTPL 620 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhcCCCC------------CCccchhHHhhhhhcchhHHHHHHHhcCCccc-CccCCCCchh
Confidence 4568889999999999988877776 88999999999999999999999999999997 9999999999
Q ss_pred HHHHHhcCCHHHHHHHHhcCCCC
Q 042183 154 CMVAEYEHSSHMVVAILKNCTSV 176 (179)
Q Consensus 154 ~~A~~~~~~~~~~~~Ll~~g~~~ 176 (179)
|+|+. -++..+++.|++.|+.+
T Consensus 621 HCAAS-CNnv~~ckqLVe~Gaav 642 (752)
T KOG0515|consen 621 HCAAS-CNNVPMCKQLVESGAAV 642 (752)
T ss_pred hhhhh-cCchHHHHHHHhccceE
Confidence 99999 99999999999999764
No 83
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.52 E-value=6.3e-14 Score=111.60 Aligned_cols=138 Identities=18% Similarity=0.137 Sum_probs=108.5
Q ss_pred CCHHHHHHHH---cCChHHHHHHHHHHHHhhCccccc----ccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchh-
Q 042183 30 IDPNLFKAAA---AGNLEPFKDMAREEILEICPSLLL----QVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDE- 101 (179)
Q Consensus 30 ~~~~l~~A~~---~g~~~~~~~ll~~~~~~~~~~~~~----~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~- 101 (179)
.++.||.|.. .++.+.++.|++ ..|..+| .....|.| |||+|..+.+.++|++|++.|++++..-.
T Consensus 143 GET~Lh~~lL~~~~~~n~la~~LL~-----~~p~lind~~~~eeY~GqS-aLHiAIv~~~~~~V~lLl~~gADV~aRa~G 216 (782)
T KOG3676|consen 143 GETLLHKALLNLSDGHNELARVLLE-----IFPKLINDIYTSEEYYGQS-ALHIAIVNRDAELVRLLLAAGADVHARACG 216 (782)
T ss_pred hhhHHHHHHhcCchhHHHHHHHHHH-----HhHHHhhhhhhhHhhcCcc-hHHHHHHhccHHHHHHHHHcCCchhhHhhc
Confidence 4578999887 344577877776 3444433 24579999 99999999999999999999998876111
Q ss_pred -h----hhhHHHHhcc-----CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHh
Q 042183 102 -E----LESGMIRMMN-----KEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILK 171 (179)
Q Consensus 102 -~----~~~~~~~~~~-----~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~ 171 (179)
. ..+......+ ..|..||.+||..++.+|+++|+++|+|++ .+|.+|.|.||..+. +-..++-+++++
T Consensus 217 ~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~-aqDS~GNTVLH~lVi-~~~~~My~~~L~ 294 (782)
T KOG3676|consen 217 AFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPN-AQDSNGNTVLHMLVI-HFVTEMYDLALE 294 (782)
T ss_pred cccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCC-ccccCCChHHHHHHH-HHHHHHHHHHHh
Confidence 1 0000001111 348899999999999999999999999987 999999999999999 888999999999
Q ss_pred cCCC
Q 042183 172 NCTS 175 (179)
Q Consensus 172 ~g~~ 175 (179)
+|++
T Consensus 295 ~ga~ 298 (782)
T KOG3676|consen 295 LGAN 298 (782)
T ss_pred cCCC
Confidence 9987
No 84
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.51 E-value=4e-13 Score=95.16 Aligned_cols=103 Identities=22% Similarity=0.262 Sum_probs=93.5
Q ss_pred ccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCC-----HHHHHHHHh
Q 042183 62 LLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKI-----VDVVKILTR 136 (179)
Q Consensus 62 ~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~-----~~~~~~Ll~ 136 (179)
....+..+.+ +++.++..+..+++.+++..+.+++. ++..|.||||+|+..++ .+++++|++
T Consensus 66 ~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~------------~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~ 132 (235)
T COG0666 66 LAARDLDGRL-PLHSAASKGDDKIVKLLLASGADVNA------------KDADGDTPLHLAALNGNPPEGNIEVAKLLLE 132 (235)
T ss_pred cccCCccccC-HHHHHHHcCcHHHHHHHHHcCCCccc------------ccCCCCcHHHHHHhcCCcccchHHHHHHHHH
Confidence 3445666888 99999999999999999999998877 99999999999999999 999999999
Q ss_pred cCC--CCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 137 EDL--DYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 137 ~~~--~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
.|+ +.....|..|.||||+|+. .|+.+++.+|++.|++++.
T Consensus 133 ~g~~~~~~~~~~~~g~tpl~~A~~-~~~~~~~~~ll~~~~~~~~ 175 (235)
T COG0666 133 AGADLDVNNLRDEDGNTPLHWAAL-NGDADIVELLLEAGADPNS 175 (235)
T ss_pred cCCCCCCccccCCCCCchhHHHHH-cCchHHHHHHHhcCCCCcc
Confidence 999 5565789999999999999 9999999999999988764
No 85
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.49 E-value=4.5e-14 Score=78.69 Aligned_cols=53 Identities=26% Similarity=0.412 Sum_probs=33.4
Q ss_pred hCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHH
Q 042183 57 ICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEA 122 (179)
Q Consensus 57 ~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A 122 (179)
..+..++..|..|.| |||+||.+|+.+++++|++.+++++. +|..|+||||+|
T Consensus 4 ~~~~~~n~~d~~G~T-~LH~A~~~g~~~~v~~Ll~~g~d~~~------------~d~~G~Tpl~~A 56 (56)
T PF13857_consen 4 HGPADVNAQDKYGNT-PLHWAARYGHSEVVRLLLQNGADPNA------------KDKDGQTPLHYA 56 (56)
T ss_dssp --T--TT---TTS---HHHHHHHHT-HHHHHHHHHCT--TT---------------TTS--HHHH-
T ss_pred cCcCCCcCcCCCCCc-HHHHHHHcCcHHHHHHHHHCcCCCCC------------CcCCCCCHHHhC
Confidence 345778899999999 99999999999999999999998877 999999999987
No 86
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.42 E-value=1.7e-13 Score=112.53 Aligned_cols=135 Identities=22% Similarity=0.273 Sum_probs=108.0
Q ss_pred CccccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhh
Q 042183 25 ISQLQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELE 104 (179)
Q Consensus 25 ~~~~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~ 104 (179)
......+++|..||..|+-|.+..|+. .+..+.-+|+.|.+ ||.+|+..||..+|+.|+++.+++..
T Consensus 752 ~Te~n~~t~LT~acaggh~e~vellv~------rganiehrdkkgf~-plImaatagh~tvV~~llk~ha~vea------ 818 (2131)
T KOG4369|consen 752 LTEPNIKTNLTSACAGGHREEVELLVV------RGANIEHRDKKGFV-PLIMAATAGHITVVQDLLKAHADVEA------ 818 (2131)
T ss_pred ccCccccccccccccCccHHHHHHHHH------hcccccccccccch-hhhhhcccCchHHHHHHHhhhhhhhh------
Confidence 455667789999999999999988887 66677889999999 99999999999999999999887655
Q ss_pred hHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCCC
Q 042183 105 SGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSHR 179 (179)
Q Consensus 105 ~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~r 179 (179)
..|+.+.|+|.+||..|+.+++++||..|+... .++....|||.+|.. .|..+++..|+..|++++.|
T Consensus 819 -----Qsdrtkdt~lSlacsggr~~vvelLl~~ganke-hrnvsDytPlsla~S-ggy~~iI~~llS~GseInSr 886 (2131)
T KOG4369|consen 819 -----QSDRTKDTMLSLACSGGRTRVVELLLNAGANKE-HRNVSDYTPLSLARS-GGYTKIIHALLSSGSEINSR 886 (2131)
T ss_pred -----hcccccCceEEEecCCCcchHHHHHHHhhcccc-ccchhhcCchhhhcC-cchHHHHHHHhhcccccccc
Confidence 245667777777777777777777777777744 677777777777777 77777777777777666543
No 87
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.29 E-value=3.5e-11 Score=86.10 Aligned_cols=94 Identities=16% Similarity=0.180 Sum_probs=85.4
Q ss_pred CcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCC
Q 042183 70 DSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYN 149 (179)
Q Consensus 70 ~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g 149 (179)
.. +|.-+.-.+..+-...||+-....+. +|..|.++|..|+..|+.++++.|++.|+|++...+..+
T Consensus 13 ~~-~Lle~i~Kndt~~a~~LLs~vr~vn~------------~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~ 79 (396)
T KOG1710|consen 13 KS-PLLEAIDKNDTEAALALLSTVRQVNQ------------RDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTL 79 (396)
T ss_pred hh-HHHHHHccCcHHHHHHHHHHhhhhhc------------cCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCccccccc
Confidence 45 88899999999988899987665555 999999999999999999999999999999988888899
Q ss_pred CCHHHHHHHhcCCHHHHHHHHhcCCCCC
Q 042183 150 KTPLCMVAEYEHSSHMVVAILKNCTSVS 177 (179)
Q Consensus 150 ~tpl~~A~~~~~~~~~~~~Ll~~g~~~~ 177 (179)
-|||++|+. .|+.++.++|++.|+...
T Consensus 80 YTpLmFAAL-SGn~dvcrllldaGa~~~ 106 (396)
T KOG1710|consen 80 YTPLMFAAL-SGNQDVCRLLLDAGARMY 106 (396)
T ss_pred ccHHHHHHH-cCCchHHHHHHhccCccc
Confidence 999999999 999999999999998753
No 88
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=99.25 E-value=7.8e-11 Score=91.26 Aligned_cols=122 Identities=19% Similarity=0.249 Sum_probs=107.5
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhc
Q 042183 32 PNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMM 111 (179)
Q Consensus 32 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~ 111 (179)
..+..|+..+++-.++.... .+..+..++.+..+ .||+|+..|+-++|+|+|+++.. ..+++.
T Consensus 868 eeil~av~~~D~~klqE~h~------~gg~ll~~~~~~~s-llh~a~~tg~~eivkyildh~p~----------elld~~ 930 (1004)
T KOG0782|consen 868 EEILRAVLSSDLMKLQETHL------NGGSLLIQGPDHCS-LLHYAAKTGNGEIVKYILDHGPS----------ELLDMA 930 (1004)
T ss_pred HHHHHHHHhccHHHHHHHHh------cCCceEeeCcchhh-HHHHHHhcCChHHHHHHHhcCCH----------HHHHHH
Confidence 34788899998777766544 56677788999999 99999999999999999999863 467788
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhc
Q 042183 112 NKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKN 172 (179)
Q Consensus 112 ~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~ 172 (179)
+..|.|+||-|+..++-.++.+|++.|+.+. ..|..|.||-.-|-. .|..+.+.||-.+
T Consensus 931 de~get~lhkaa~~~~r~vc~~lvdagasl~-ktd~kg~tp~eraqq-a~d~dlaayle~r 989 (1004)
T KOG0782|consen 931 DETGETALHKAACQRNRAVCQLLVDAGASLR-KTDSKGKTPQERAQQ-AGDPDLAAYLESR 989 (1004)
T ss_pred hhhhhHHHHHHHHhcchHHHHHHHhcchhhe-ecccCCCChHHHHHh-cCCchHHHHHhhh
Confidence 9999999999999999999999999999986 899999999999999 9999999998765
No 89
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=99.23 E-value=7e-12 Score=100.52 Aligned_cols=89 Identities=17% Similarity=0.240 Sum_probs=81.1
Q ss_pred hhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccC-CCCcHHHHHHHcCCHHHHHHH
Q 042183 56 EICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNK-EKHTALHEAVFHKIVDVVKIL 134 (179)
Q Consensus 56 ~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~-~g~t~l~~A~~~g~~~~~~~L 134 (179)
..+....+++|..|++ +||+|+..+...++++|+++|.+... +|. .|+||||.|..+|+++|+..|
T Consensus 39 k~c~n~anikD~~GR~-alH~~~S~~k~~~l~wLlqhGidv~v------------qD~ESG~taLHRaiyyG~idca~lL 105 (1267)
T KOG0783|consen 39 KSCQNLANIKDRYGRT-ALHIAVSENKNSFLRWLLQHGIDVFV------------QDEESGYTALHRAIYYGNIDCASLL 105 (1267)
T ss_pred HhhhhhhhHHHhhccc-eeeeeeccchhHHHHHHHhcCceeee------------ccccccchHhhHhhhhchHHHHHHH
Confidence 4566778999999999 99999999999999999999997766 665 599999999999999999999
Q ss_pred HhcCCCCCCCCCCCCCCHHHHHHH
Q 042183 135 TREDLDYPYSANNYNKTPLCMVAE 158 (179)
Q Consensus 135 l~~~~~~~~~~~~~g~tpl~~A~~ 158 (179)
+.+|..+. ++|..|.+||..-++
T Consensus 106 L~~g~SL~-i~Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 106 LSKGRSLR-IKDKEGLSPLQFLSR 128 (1267)
T ss_pred HhcCCceE-EecccCCCHHHHHhh
Confidence 99999865 999999999998877
No 90
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.12 E-value=7.3e-11 Score=97.49 Aligned_cols=126 Identities=17% Similarity=0.236 Sum_probs=96.5
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhhCccccc-ccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHh
Q 042183 32 PNLFKAAAAGNLEPFKDMAREEILEICPSLLL-QVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRM 110 (179)
Q Consensus 32 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~-~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~ 110 (179)
.+|..|+-.|+...|+.|++ ....+. ..|..+.| +|.+||..|+.+++++||..|++...
T Consensus 792 ~plImaatagh~tvV~~llk------~ha~veaQsdrtkdt-~lSlacsggr~~vvelLl~~gankeh------------ 852 (2131)
T KOG4369|consen 792 VPLIMAATAGHITVVQDLLK------AHADVEAQSDRTKDT-MLSLACSGGRTRVVELLLNAGANKEH------------ 852 (2131)
T ss_pred hhhhhhcccCchHHHHHHHh------hhhhhhhhcccccCc-eEEEecCCCcchHHHHHHHhhccccc------------
Confidence 67999999999999999987 222333 46778888 99999999999999999999988776
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCC-CCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCC
Q 042183 111 MNKEKHTALHEAVFHKIVDVVKILTREDLDYP-YSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVS 177 (179)
Q Consensus 111 ~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~-~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~ 177 (179)
++....|||..|...|.++++..|+..|+.++ +.....|-.||.+|.+ +||...++.|++.|.|++
T Consensus 853 rnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatm-ngh~~at~~ll~~gsdiN 919 (2131)
T KOG4369|consen 853 RNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATM-NGHQAATLSLLQPGSDIN 919 (2131)
T ss_pred cchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhh-ccccHHHHHHhcccchhc
Confidence 67777777777777777777777777776653 1334456677777777 777777777777776654
No 91
>PF13606 Ank_3: Ankyrin repeat
Probab=99.07 E-value=2.6e-10 Score=54.82 Aligned_cols=28 Identities=25% Similarity=0.395 Sum_probs=18.1
Q ss_pred CCCHHHHHHHhcCCHHHHHHHHhcCCCCC
Q 042183 149 NKTPLCMVAEYEHSSHMVVAILKNCTSVS 177 (179)
Q Consensus 149 g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~ 177 (179)
|+||||+|+. .|+.+++++|+++|+|++
T Consensus 2 G~T~Lh~A~~-~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 2 GNTPLHLAAS-NGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCHHHHHHH-hCCHHHHHHHHHcCCCCC
Confidence 5666666666 666666666666666654
No 92
>PF13606 Ank_3: Ankyrin repeat
Probab=99.04 E-value=4.1e-10 Score=54.09 Aligned_cols=29 Identities=28% Similarity=0.322 Sum_probs=27.1
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCCC
Q 042183 114 EKHTALHEAVFHKIVDVVKILTREDLDYP 142 (179)
Q Consensus 114 ~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~ 142 (179)
+|+||||+||..|+.+++++|++.|++++
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 58999999999999999999999999864
No 93
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=99.03 E-value=3.9e-10 Score=85.58 Aligned_cols=92 Identities=23% Similarity=0.263 Sum_probs=76.4
Q ss_pred CCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhc-CCCCCCC
Q 042183 66 NAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTRE-DLDYPYS 144 (179)
Q Consensus 66 ~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~-~~~~~~~ 144 (179)
+.++.. .+++|+..|....++-+.-.|.+... +|.+..|+||+|+..|+++++++|++. +.+ ...
T Consensus 503 ~~~~~i-~~~~aa~~GD~~alrRf~l~g~D~~~------------~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~-~~~ 568 (622)
T KOG0506|consen 503 ENDTVI-NVMYAAKNGDLSALRRFALQGMDLET------------KDYDDRTALHVAAAEGHVEVVKFLLNACKVD-PDP 568 (622)
T ss_pred cccchh-hhhhhhhcCCHHHHHHHHHhcccccc------------cccccchhheeecccCceeHHHHHHHHHcCC-CCh
Confidence 345556 78899999999988888888877666 888999999999999999999999887 344 347
Q ss_pred CCCCCCCHHHHHHHhcCCHHHHHHHHhc
Q 042183 145 ANNYNKTPLCMVAEYEHSSHMVVAILKN 172 (179)
Q Consensus 145 ~~~~g~tpl~~A~~~~~~~~~~~~Ll~~ 172 (179)
+|.+|+|||+=|.. -+|.+++++|.+.
T Consensus 569 kDRw~rtPlDdA~~-F~h~~v~k~L~~~ 595 (622)
T KOG0506|consen 569 KDRWGRTPLDDAKH-FKHKEVVKLLEEA 595 (622)
T ss_pred hhccCCCcchHhHh-cCcHHHHHHHHHH
Confidence 89999999999999 8999999988764
No 94
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=99.03 E-value=1.8e-09 Score=82.39 Aligned_cols=87 Identities=13% Similarity=0.120 Sum_probs=78.1
Q ss_pred HHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCH
Q 042183 73 SLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTP 152 (179)
Q Consensus 73 ~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tp 152 (179)
-||-.++.|+.+..--||..|+..+. .....|.||||.|++.|+.--+++|+-+|+|+. ..|.+|+||
T Consensus 136 QLhasvRt~nlet~LRll~lGA~~N~-----------~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~-a~d~~GmtP 203 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSLGAQANF-----------FHPEKGNTPLHVAAKAGQILQAELLAVYGADPG-AQDSSGMTP 203 (669)
T ss_pred HHHHHhhcccHHHHHHHHHcccccCC-----------CCcccCCchhHHHHhccchhhhhHHhhccCCCC-CCCCCCCcH
Confidence 48999999999998899999998877 233468999999999999999999999999987 899999999
Q ss_pred HHHHHHhcCCHHHHHHHHhc
Q 042183 153 LCMVAEYEHSSHMVVAILKN 172 (179)
Q Consensus 153 l~~A~~~~~~~~~~~~Ll~~ 172 (179)
+.+|-. .||.+++.-|++.
T Consensus 204 ~~~AR~-~gH~~laeRl~e~ 222 (669)
T KOG0818|consen 204 VDYARQ-GGHHELAERLVEI 222 (669)
T ss_pred HHHHHh-cCchHHHHHHHHH
Confidence 999999 9999998887764
No 95
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=99.01 E-value=4.8e-10 Score=85.09 Aligned_cols=87 Identities=26% Similarity=0.284 Sum_probs=76.8
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHh-hcccCCchhhhhhHHHHh
Q 042183 32 PNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIER-AKLLQHEDEELESGMIRM 110 (179)
Q Consensus 32 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~~~~~~~~ 110 (179)
-++++|++.|++..++.+.= .+.+++.+|.+.+| +||.|+..|+.+++++|++. ..++..
T Consensus 508 i~~~~aa~~GD~~alrRf~l------~g~D~~~~DyD~RT-aLHvAAaEG~v~v~kfl~~~~kv~~~~------------ 568 (622)
T KOG0506|consen 508 INVMYAAKNGDLSALRRFAL------QGMDLETKDYDDRT-ALHVAAAEGHVEVVKFLLNACKVDPDP------------ 568 (622)
T ss_pred hhhhhhhhcCCHHHHHHHHH------hcccccccccccch-hheeecccCceeHHHHHHHHHcCCCCh------------
Confidence 45899999999999998764 56788999999999 99999999999999999975 444444
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHhc
Q 042183 111 MNKEKHTALHEAVFHKIVDVVKILTRE 137 (179)
Q Consensus 111 ~~~~g~t~l~~A~~~g~~~~~~~Ll~~ 137 (179)
+|.+|.|||.-|...+|.+++++|-+.
T Consensus 569 kDRw~rtPlDdA~~F~h~~v~k~L~~~ 595 (622)
T KOG0506|consen 569 KDRWGRTPLDDAKHFKHKEVVKLLEEA 595 (622)
T ss_pred hhccCCCcchHhHhcCcHHHHHHHHHH
Confidence 899999999999999999999999765
No 96
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.01 E-value=2.3e-09 Score=86.50 Aligned_cols=125 Identities=14% Similarity=0.131 Sum_probs=102.0
Q ss_pred cCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHH
Q 042183 29 QIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMI 108 (179)
Q Consensus 29 ~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~ 108 (179)
..+..+..|++.|+.-.|+.++.+... ..-++|..|.-|.+ +|+.|..+.+.+++++|+++....
T Consensus 24 ~~e~~fL~a~E~gd~~~V~k~l~~~~~--~~lninc~d~lGr~-al~iai~nenle~~eLLl~~~~~~------------ 88 (822)
T KOG3609|consen 24 EGEKGFLLAHENGDVPLVAKALEYKAV--SKLNINCRDPLGRL-ALHIAIDNENLELQELLLDTSSEE------------ 88 (822)
T ss_pred hhhHHHHHHHHcCChHHHHHHHHhccc--cccchhccChHhhh-ceecccccccHHHHHHHhcCcccc------------
Confidence 344668899999999999999873221 33467889999999 999999999999999999986422
Q ss_pred HhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCC---------CCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCC
Q 042183 109 RMMNKEKHTALHEAVFHKIVDVVKILTREDLDY---------PYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSV 176 (179)
Q Consensus 109 ~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~---------~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~ 176 (179)
..+|..|+..|..++|+.++.+-... +...-..+.||+.+||. .+++||+++|+++|+++
T Consensus 89 -------gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh-~NnyEil~~Ll~kg~~i 157 (822)
T KOG3609|consen 89 -------GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAH-LNNFEILQCLLTRGHCI 157 (822)
T ss_pred -------chHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHH-hcchHHHHHHHHcCCCC
Confidence 35899999999999999999873322 11233457899999999 99999999999999875
No 97
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.97 E-value=2.8e-09 Score=82.75 Aligned_cols=92 Identities=17% Similarity=0.120 Sum_probs=77.6
Q ss_pred HHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHH
Q 042183 74 LLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPL 153 (179)
Q Consensus 74 L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl 153 (179)
|..|+...++..+-+||.+|..... .--..+.+|.|+||+||..|++.+.++|+-+|.|+. .+|.+|.|||
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e~--------~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~-~rda~g~t~l 698 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREEV--------NETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVM-ARDAHGRTAL 698 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhh--------hccccCCCCcchhhhhhhhcchhHHHHHHHhCccce-ecccCCchhh
Confidence 5677777888888999999864322 001134567999999999999999999999999987 8999999999
Q ss_pred HHHHHhcCCHHHHHHHHhcCCC
Q 042183 154 CMVAEYEHSSHMVVAILKNCTS 175 (179)
Q Consensus 154 ~~A~~~~~~~~~~~~Ll~~g~~ 175 (179)
.+|-. .|..+|+..|++.|.-
T Consensus 699 ~yar~-a~sqec~d~llq~gcp 719 (749)
T KOG0705|consen 699 FYARQ-AGSQECIDVLLQYGCP 719 (749)
T ss_pred hhHhh-cccHHHHHHHHHcCCC
Confidence 99999 9999999999999853
No 98
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.94 E-value=2.2e-09 Score=52.93 Aligned_cols=29 Identities=31% Similarity=0.384 Sum_probs=20.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCCC
Q 042183 114 EKHTALHEAVFHKIVDVVKILTREDLDYP 142 (179)
Q Consensus 114 ~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~ 142 (179)
+|.||||+|+..|+.+++++|+++|++++
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~ 29 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADIN 29 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCC
Confidence 46677777777777777777777777754
No 99
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.89 E-value=6e-09 Score=80.18 Aligned_cols=89 Identities=18% Similarity=0.262 Sum_probs=77.3
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhc
Q 042183 32 PNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMM 111 (179)
Q Consensus 32 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~ 111 (179)
.++|.+....+.+.+...+. .+ ....++.+|..|.| |||.|+..|+.+.++.|+..+++... +
T Consensus 22 ~~lh~~~~~~~~~sl~~el~---~~-~~~~id~~D~~g~T-pLhlAV~Lg~~~~a~~Ll~a~Adv~~------------k 84 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELL---AK-VSLVIDRRDPPGRT-PLHLAVRLGHVEAARILLSAGADVSI------------K 84 (560)
T ss_pred cccchhhhccchhhHHHHHh---hh-hhceeccccCCCCc-cHHHHHHhcCHHHHHHHHhcCCCccc------------c
Confidence 56999999999888877654 22 44567889999999 99999999999999999999998877 9
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHhc
Q 042183 112 NKEKHTALHEAVFHKIVDVVKILTRE 137 (179)
Q Consensus 112 ~~~g~t~l~~A~~~g~~~~~~~Ll~~ 137 (179)
+..||+|||.|+.+|+.+++..++.+
T Consensus 85 N~~gWs~L~EAv~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 85 NNEGWSPLHEAVSTGNEQIITEVLRH 110 (560)
T ss_pred ccccccHHHHHHHcCCHHHHHHHHHH
Confidence 99999999999999999988777764
No 100
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.89 E-value=2.9e-09 Score=52.45 Aligned_cols=31 Identities=26% Similarity=0.388 Sum_probs=28.7
Q ss_pred CCCCHHHHHHHhcCCHHHHHHHHhcCCCCCCC
Q 042183 148 YNKTPLCMVAEYEHSSHMVVAILKNCTSVSHR 179 (179)
Q Consensus 148 ~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~r 179 (179)
+|.||||+|+. .|+.+++++|+++|++++.+
T Consensus 1 dG~TpLh~A~~-~~~~~~v~~Ll~~ga~~~~~ 31 (33)
T PF00023_consen 1 DGNTPLHYAAQ-RGHPDIVKLLLKHGADINAR 31 (33)
T ss_dssp TSBBHHHHHHH-TTCHHHHHHHHHTTSCTTCB
T ss_pred CcccHHHHHHH-HHHHHHHHHHHHCcCCCCCC
Confidence 48999999999 99999999999999998753
No 101
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.82 E-value=1.9e-08 Score=77.47 Aligned_cols=87 Identities=23% Similarity=0.258 Sum_probs=70.1
Q ss_pred HHHHHHHcCCHH-HHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCC
Q 042183 73 SLLVAAKFGHCD-IVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKT 151 (179)
Q Consensus 73 ~L~~A~~~g~~~-~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t 151 (179)
|+|+++.....+ +.+.+... ... .+...|..|.||||.|+..|+.++++.|+..|+++. .+|..|++
T Consensus 23 ~lh~~~~~~~~~sl~~el~~~-~~~----------~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~-~kN~~gWs 90 (560)
T KOG0522|consen 23 PLHWAVVTTDSDSLEQELLAK-VSL----------VIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVS-IKNNEGWS 90 (560)
T ss_pred ccchhhhccchhhHHHHHhhh-hhc----------eeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCcc-cccccccc
Confidence 589998887765 43434333 211 223388889999999999999999999999999987 89999999
Q ss_pred HHHHHHHhcCCHHHHHHHHhc
Q 042183 152 PLCMVAEYEHSSHMVVAILKN 172 (179)
Q Consensus 152 pl~~A~~~~~~~~~~~~Ll~~ 172 (179)
|||-|+. .|+.+++..++.+
T Consensus 91 ~L~EAv~-~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 91 PLHEAVS-TGNEQIITEVLRH 110 (560)
T ss_pred HHHHHHH-cCCHHHHHHHHHH
Confidence 9999999 9999887777654
No 102
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.81 E-value=3.4e-08 Score=75.68 Aligned_cols=88 Identities=19% Similarity=0.140 Sum_probs=75.6
Q ss_pred cCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCC-CCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHH
Q 042183 29 QIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNA-KGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGM 107 (179)
Q Consensus 29 ~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~-~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~ 107 (179)
....+||-.++.|+++..-.|+. .+...|..+. .|.| |||.|++.|+..=+++|+-+|+++..
T Consensus 132 ~LsrQLhasvRt~nlet~LRll~------lGA~~N~~hpekg~T-pLHvAAk~Gq~~Q~ElL~vYGAD~~a--------- 195 (669)
T KOG0818|consen 132 DLSKQLHSSVRTGNLETCLRLLS------LGAQANFFHPEKGNT-PLHVAAKAGQILQAELLAVYGADPGA--------- 195 (669)
T ss_pred HHHHHHHHHhhcccHHHHHHHHH------cccccCCCCcccCCc-hhHHHHhccchhhhhHHhhccCCCCC---------
Confidence 34577999999999999988887 5666677664 6777 99999999999999999999999988
Q ss_pred HHhccCCCCcHHHHHHHcCCHHHHHHHH
Q 042183 108 IRMMNKEKHTALHEAVFHKIVDVVKILT 135 (179)
Q Consensus 108 ~~~~~~~g~t~l~~A~~~g~~~~~~~Ll 135 (179)
+|..|.||+.+|-..||-++.+.|+
T Consensus 196 ---~d~~GmtP~~~AR~~gH~~laeRl~ 220 (669)
T KOG0818|consen 196 ---QDSSGMTPVDYARQGGHHELAERLV 220 (669)
T ss_pred ---CCCCCCcHHHHHHhcCchHHHHHHH
Confidence 9999999999999999976665554
No 103
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.75 E-value=4.1e-08 Score=76.46 Aligned_cols=95 Identities=18% Similarity=0.098 Sum_probs=79.0
Q ss_pred CHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHh
Q 042183 31 DPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRM 110 (179)
Q Consensus 31 ~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~ 110 (179)
...|..|....|+..+..||..+. ....+-...+.+|.| +||+||+.|++.+.++|+=+|.+...
T Consensus 625 gqqLl~A~~~~Dl~t~~lLLAhg~--~~e~~~t~~~~~grt-~LHLa~~~gnVvl~QLLiWyg~dv~~------------ 689 (749)
T KOG0705|consen 625 GQQLLRAVAAEDLQTAILLLAHGS--REEVNETCGEGDGRT-ALHLAARKGNVVLAQLLIWYGVDVMA------------ 689 (749)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccC--chhhhccccCCCCcc-hhhhhhhhcchhHHHHHHHhCcccee------------
Confidence 456889999999988888876221 111122346678899 99999999999999999999988777
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Q 042183 111 MNKEKHTALHEAVFHKIVDVVKILTREDLD 140 (179)
Q Consensus 111 ~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~ 140 (179)
+|..|.|+|.+|-+.|..+|++.|+.+|+.
T Consensus 690 rda~g~t~l~yar~a~sqec~d~llq~gcp 719 (749)
T KOG0705|consen 690 RDAHGRTALFYARQAGSQECIDVLLQYGCP 719 (749)
T ss_pred cccCCchhhhhHhhcccHHHHHHHHHcCCC
Confidence 999999999999999999999999999875
No 104
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.48 E-value=1.1e-06 Score=65.61 Aligned_cols=68 Identities=21% Similarity=0.174 Sum_probs=59.1
Q ss_pred HHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC-CCCC
Q 042183 73 SLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANN-YNKT 151 (179)
Q Consensus 73 ~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~-~g~t 151 (179)
-|..||+.|..+.|++|++.|.++|. .|+...+||.+|+.-||.+++++|+++|+-+. +|. .|.-
T Consensus 39 elceacR~GD~d~v~~LVetgvnVN~------------vD~fD~spL~lAsLcGHe~vvklLLenGAiC~--rdtf~G~R 104 (516)
T KOG0511|consen 39 ELCEACRAGDVDRVRYLVETGVNVNA------------VDRFDSSPLYLASLCGHEDVVKLLLENGAICS--RDTFDGDR 104 (516)
T ss_pred HHHHHhhcccHHHHHHHHHhCCCcch------------hhcccccHHHHHHHcCcHHHHHHHHHcCCccc--ccccCcch
Confidence 57899999999999999999998887 99999999999999999999999999999864 444 4444
Q ss_pred HHH
Q 042183 152 PLC 154 (179)
Q Consensus 152 pl~ 154 (179)
+++
T Consensus 105 C~Y 107 (516)
T KOG0511|consen 105 CHY 107 (516)
T ss_pred hhh
Confidence 443
No 105
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.48 E-value=8.5e-08 Score=77.77 Aligned_cols=68 Identities=18% Similarity=0.121 Sum_probs=60.7
Q ss_pred HHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCC
Q 042183 108 IRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSV 176 (179)
Q Consensus 108 ~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~ 176 (179)
.+++|..|.|+||.|+..+..+++++|+++|.++.-.--..|+||||-|.. +|+.+|+-.|+.+|+..
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiy-yG~idca~lLL~~g~SL 112 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIY-YGNIDCASLLLSKGRSL 112 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhh-hchHHHHHHHHhcCCce
Confidence 466899999999999999999999999999999863333479999999999 99999999999999654
No 106
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.43 E-value=2.9e-07 Score=75.99 Aligned_cols=88 Identities=22% Similarity=0.282 Sum_probs=79.1
Q ss_pred CCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCC
Q 042183 67 AKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSAN 146 (179)
Q Consensus 67 ~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~ 146 (179)
..|.+ +||.|+..|..-+.++|+++|++.+. .|..|.+|+|.+...|+...+..|+++|++.. ..+
T Consensus 654 ~~~~s-~lh~a~~~~~~~~~e~ll~~ga~vn~------------~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~-a~~ 719 (785)
T KOG0521|consen 654 CIGCS-LLHVAVGTGDSGAVELLLQNGADVNA------------LDSKGRTPLHHATASGHTSIACLLLKRGADPN-AFD 719 (785)
T ss_pred hcccc-hhhhhhccchHHHHHHHHhcCCcchh------------hhccCCCcchhhhhhcccchhhhhcccccccc-ccC
Confidence 46788 99999999999999999999998776 99999999999999999999999999999976 899
Q ss_pred CCCCCHHHHHHHhcCCHHHHHHH
Q 042183 147 NYNKTPLCMVAEYEHSSHMVVAI 169 (179)
Q Consensus 147 ~~g~tpl~~A~~~~~~~~~~~~L 169 (179)
..|.+|+++|.. ..+-+++-++
T Consensus 720 ~~~~~~l~~a~~-~~~~d~~~l~ 741 (785)
T KOG0521|consen 720 PDGKLPLDIAME-AANADIVLLL 741 (785)
T ss_pred ccCcchhhHHhh-hccccHHHHH
Confidence 999999999988 6666665544
No 107
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.43 E-value=8.6e-07 Score=66.17 Aligned_cols=60 Identities=23% Similarity=0.354 Sum_probs=55.3
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCC
Q 042183 32 PNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQH 98 (179)
Q Consensus 32 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~ 98 (179)
-.|..||+.|+++.|++|++ .+..+|..|....+ ||.+|+.-||...+++|+++|+-...
T Consensus 38 ~elceacR~GD~d~v~~LVe------tgvnVN~vD~fD~s-pL~lAsLcGHe~vvklLLenGAiC~r 97 (516)
T KOG0511|consen 38 GELCEACRAGDVDRVRYLVE------TGVNVNAVDRFDSS-PLYLASLCGHEDVVKLLLENGAICSR 97 (516)
T ss_pred HHHHHHhhcccHHHHHHHHH------hCCCcchhhccccc-HHHHHHHcCcHHHHHHHHHcCCcccc
Confidence 45999999999999999998 67788999999999 99999999999999999999987654
No 108
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.41 E-value=7.6e-07 Score=69.71 Aligned_cols=88 Identities=23% Similarity=0.208 Sum_probs=77.2
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhhCc-ccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHh
Q 042183 32 PNLFKAAAAGNLEPFKDMAREEILEICP-SLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRM 110 (179)
Q Consensus 32 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~-~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~ 110 (179)
+-||+|++.|+.++|+++++ ..| ..++..|..|+| +||.|+..++..+..+|++.|+..-.
T Consensus 901 sllh~a~~tg~~eivkyild-----h~p~elld~~de~get-~lhkaa~~~~r~vc~~lvdagasl~k------------ 962 (1004)
T KOG0782|consen 901 SLLHYAAKTGNGEIVKYILD-----HGPSELLDMADETGET-ALHKAACQRNRAVCQLLVDAGASLRK------------ 962 (1004)
T ss_pred hHHHHHHhcCChHHHHHHHh-----cCCHHHHHHHhhhhhH-HHHHHHHhcchHHHHHHHhcchhhee------------
Confidence 55999999999999999987 333 356678899999 99999999999999999999986655
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHhc
Q 042183 111 MNKEKHTALHEAVFHKIVDVVKILTRE 137 (179)
Q Consensus 111 ~~~~g~t~l~~A~~~g~~~~~~~Ll~~ 137 (179)
.|..|.||-..|-+.|..++..||-..
T Consensus 963 td~kg~tp~eraqqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 963 TDSKGKTPQERAQQAGDPDLAAYLESR 989 (1004)
T ss_pred cccCCCChHHHHHhcCCchHHHHHhhh
Confidence 899999999999999999999998653
No 109
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.35 E-value=7e-07 Score=73.99 Aligned_cols=98 Identities=12% Similarity=0.047 Sum_probs=55.3
Q ss_pred ccccCCCCCcHHHHHHHHcCCHHHHHHHHHh-hcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhc-CC
Q 042183 62 LLQVNAKGDSRSLLVAAKFGHCDIVSVLIER-AKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTRE-DL 139 (179)
Q Consensus 62 ~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~-~~ 139 (179)
.......|.+ .+|+++..+....++.+++. +..... .+.+|.-.+|+ |..++.++.-+|+.. |.
T Consensus 567 ~~~~~~r~~l-llhL~a~~lyawLie~~~e~~~~~~~e------------ld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ 632 (975)
T KOG0520|consen 567 SSSVNFRDML-LLHLLAELLYAWLIEKVIEWAGSGDLE------------LDRDGQGVIHF-CAALGYEWAFLPISADGV 632 (975)
T ss_pred cccCCCcchH-HHHHHHHHhHHHHHHHHhcccccCchh------------hcccCCChhhH-hhhcCCceeEEEEeeccc
Confidence 3445667888 89999999888888888876 433322 44444444555 333334443333322 22
Q ss_pred CCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCC
Q 042183 140 DYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTS 175 (179)
Q Consensus 140 ~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~ 175 (179)
.+. .+|..|+||||+|+. .|+..++..|+..|++
T Consensus 633 ai~-i~D~~G~tpL~wAa~-~G~e~l~a~l~~lga~ 666 (975)
T KOG0520|consen 633 AID-IRDRNGWTPLHWAAF-RGREKLVASLIELGAD 666 (975)
T ss_pred ccc-cccCCCCcccchHhh-cCHHHHHHHHHHhccc
Confidence 322 555555555555555 5555555555555543
No 110
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.34 E-value=1.1e-06 Score=59.75 Aligned_cols=64 Identities=14% Similarity=0.063 Sum_probs=58.3
Q ss_pred HHHhccCCCCcHHHHHHHcCCHHHHHHHHhcC-CCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhc
Q 042183 107 MIRMMNKEKHTALHEAVFHKIVDVVKILTRED-LDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKN 172 (179)
Q Consensus 107 ~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~-~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~ 172 (179)
.++.+|..||||++.|+..|..+.+.||+.+| +.+. ..|..+.+++.+|-. .|..+++..|.+.
T Consensus 4 ~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vg-v~d~ssldaaqlaek-~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 4 NINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVG-VTDESSLDAAQLAEK-GGAQAFVHSLFEN 68 (223)
T ss_pred CccchhhhcchHHHHHhhhcchhHHHHHhccCccccc-ccccccchHHHHHHh-cChHHHHHHHHHH
Confidence 45669999999999999999999999999999 5554 899999999999999 9999999999775
No 111
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.34 E-value=1.5e-06 Score=59.02 Aligned_cols=68 Identities=22% Similarity=0.162 Sum_probs=60.4
Q ss_pred ccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhh-cccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcC
Q 042183 60 SLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERA-KLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTRED 138 (179)
Q Consensus 60 ~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~ 138 (179)
..+|.+|..|+| +|++|+..|.-+.+.+|+.+| +.+.. .|..|.+++.+|-..|+.+.+..|.+..
T Consensus 3 ~~in~rD~fgWT-almcaa~eg~~eavsyllgrg~a~vgv------------~d~ssldaaqlaek~g~~~fvh~lfe~~ 69 (223)
T KOG2384|consen 3 GNINARDAFGWT-ALMCAAMEGSNEAVSYLLGRGVAFVGV------------TDESSLDAAQLAEKGGAQAFVHSLFEND 69 (223)
T ss_pred CCccchhhhcch-HHHHHhhhcchhHHHHHhccCcccccc------------cccccchHHHHHHhcChHHHHHHHHHHh
Confidence 467889999999 999999999999999999999 55444 8999999999999999999999998874
Q ss_pred CC
Q 042183 139 LD 140 (179)
Q Consensus 139 ~~ 140 (179)
.+
T Consensus 70 ~e 71 (223)
T KOG2384|consen 70 RE 71 (223)
T ss_pred cc
Confidence 43
No 112
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.22 E-value=1.3e-06 Score=72.39 Aligned_cols=121 Identities=14% Similarity=0.018 Sum_probs=85.8
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHH-HhhcccCCchhhhhhHHHHh
Q 042183 32 PNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLI-ERAKLLQHEDEELESGMIRM 110 (179)
Q Consensus 32 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll-~~~~~~~~~~~~~~~~~~~~ 110 (179)
+-+|.++..+..-.+..+++ | ........|.+|.- .+|+++ .++.++.-++. -.+...+ +
T Consensus 576 lllhL~a~~lyawLie~~~e-~----~~~~~~eld~d~qg-V~hfca-~lg~ewA~ll~~~~~~ai~------------i 636 (975)
T KOG0520|consen 576 LLLHLLAELLYAWLIEKVIE-W----AGSGDLELDRDGQG-VIHFCA-ALGYEWAFLPISADGVAID------------I 636 (975)
T ss_pred HHHHHHHHHhHHHHHHHHhc-c----cccCchhhcccCCC-hhhHhh-hcCCceeEEEEeecccccc------------c
Confidence 45888888888888877775 2 12233344555555 777744 44555444443 3444443 4
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCC-----CCCCCCCHHHHHHHhcCCHHHHHHHHhc
Q 042183 111 MNKEKHTALHEAVFHKIVDVVKILTREDLDYPYS-----ANNYNKTPLCMVAEYEHSSHMVVAILKN 172 (179)
Q Consensus 111 ~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~-----~~~~g~tpl~~A~~~~~~~~~~~~Ll~~ 172 (179)
+|..||||||+|+..|+..++..|++.|++.... ....|.|+-.+|.. +|+..+..+|-+.
T Consensus 637 ~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s-~g~~gia~~lse~ 702 (975)
T KOG0520|consen 637 RDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARA-NGHKGIAGYLSEK 702 (975)
T ss_pred ccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhc-ccccchHHHHhhh
Confidence 9999999999999999999999999877654322 33468889999999 9999999888665
No 113
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.75 E-value=3.3e-05 Score=64.20 Aligned_cols=85 Identities=20% Similarity=0.231 Sum_probs=75.9
Q ss_pred CHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHh
Q 042183 31 DPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRM 110 (179)
Q Consensus 31 ~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~ 110 (179)
-+.||.|+..|..-.+..|++ .++.++.+|..|.+ |||.+...|+...+..++++++.++.
T Consensus 657 ~s~lh~a~~~~~~~~~e~ll~------~ga~vn~~d~~g~~-plh~~~~~g~~~~~~~ll~~~a~~~a------------ 717 (785)
T KOG0521|consen 657 CSLLHVAVGTGDSGAVELLLQ------NGADVNALDSKGRT-PLHHATASGHTSIACLLLKRGADPNA------------ 717 (785)
T ss_pred cchhhhhhccchHHHHHHHHh------cCCcchhhhccCCC-cchhhhhhcccchhhhhccccccccc------------
Confidence 367999999999999988887 77789999999999 99999999999999999999998887
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHH
Q 042183 111 MNKEKHTALHEAVFHKIVDVVKIL 134 (179)
Q Consensus 111 ~~~~g~t~l~~A~~~g~~~~~~~L 134 (179)
.+.+|.+|+++|....+.+++-++
T Consensus 718 ~~~~~~~~l~~a~~~~~~d~~~l~ 741 (785)
T KOG0521|consen 718 FDPDGKLPLDIAMEAANADIVLLL 741 (785)
T ss_pred cCccCcchhhHHhhhccccHHHHH
Confidence 999999999999888776665544
No 114
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.57 E-value=0.0002 Score=32.72 Aligned_cols=27 Identities=26% Similarity=0.444 Sum_probs=14.0
Q ss_pred CCCHHHHHHHhcCCHHHHHHHHhcCCCC
Q 042183 149 NKTPLCMVAEYEHSSHMVVAILKNCTSV 176 (179)
Q Consensus 149 g~tpl~~A~~~~~~~~~~~~Ll~~g~~~ 176 (179)
|.||+++|+. .++.+++++|++.|.++
T Consensus 2 ~~~~l~~~~~-~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAE-NGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHH-cCCHHHHHHHHHcCCCC
Confidence 4455555555 55555555555555443
No 115
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.49 E-value=0.00029 Score=32.17 Aligned_cols=28 Identities=32% Similarity=0.381 Sum_probs=25.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCC
Q 042183 114 EKHTALHEAVFHKIVDVVKILTREDLDY 141 (179)
Q Consensus 114 ~g~t~l~~A~~~g~~~~~~~Ll~~~~~~ 141 (179)
.|.||+|+|+..++.+++++|++.+.++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 3789999999999999999999987764
No 116
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.44 E-value=0.0003 Score=57.84 Aligned_cols=95 Identities=18% Similarity=0.086 Sum_probs=69.7
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhc
Q 042183 32 PNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMM 111 (179)
Q Consensus 32 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~ 111 (179)
..|+.|+.+.+.+....|++ .+..+ .. +|.+|...|..++|+.++.+......... ....-...
T Consensus 64 ~al~iai~nenle~~eLLl~------~~~~~-------gd-ALL~aI~~~~v~~VE~ll~~~~~~~~~~~--~~d~~~~~ 127 (822)
T KOG3609|consen 64 LALHIAIDNENLELQELLLD------TSSEE-------GD-ALLLAIAVGSVPLVELLLVHFVDAPYLER--SGDANSPH 127 (822)
T ss_pred hceecccccccHHHHHHHhc------Ccccc-------ch-HHHHHHHHHHHHHHHHHHhcccccchhcc--ccccCccc
Confidence 45899999999999988876 22221 33 89999999999999999998654432111 00000112
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHhcCCCCC
Q 042183 112 NKEKHTALHEAVFHKIVDVVKILTREDLDYP 142 (179)
Q Consensus 112 ~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~ 142 (179)
-.-+.||+..||..++.+|++.|+++|+++.
T Consensus 128 ft~ditPliLAAh~NnyEil~~Ll~kg~~i~ 158 (822)
T KOG3609|consen 128 FTPDITPLMLAAHLNNFEILQCLLTRGHCIP 158 (822)
T ss_pred CCCCccHHHHHHHhcchHHHHHHHHcCCCCC
Confidence 2347899999999999999999999998865
No 117
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.41 E-value=0.00025 Score=55.11 Aligned_cols=75 Identities=19% Similarity=0.141 Sum_probs=53.6
Q ss_pred HHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCC
Q 042183 83 CDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHS 162 (179)
Q Consensus 83 ~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~ 162 (179)
...+++|.+++...+.... ....+.--.|+||+|+.+|..+|+.+||+.|+|.. .+|..|.||+.++.. ...
T Consensus 404 p~~ie~lken~lsgnf~~~------pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~-~kd~~Grtpy~ls~n-kdV 475 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVT------PEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPS-TKDGAGRTPYSLSAN-KDV 475 (591)
T ss_pred hhHHHHHHhcCCccccccc------ccccccccchHHHHHHhcchHHHHHHHHHhcCCch-hcccCCCCccccccc-HHH
Confidence 4566777776655433110 01122335689999999999999999999999976 899999999998876 443
Q ss_pred HHH
Q 042183 163 SHM 165 (179)
Q Consensus 163 ~~~ 165 (179)
..+
T Consensus 476 k~~ 478 (591)
T KOG2505|consen 476 KSI 478 (591)
T ss_pred HHH
Confidence 333
No 118
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=96.98 E-value=0.0095 Score=42.15 Aligned_cols=118 Identities=15% Similarity=0.189 Sum_probs=79.0
Q ss_pred HHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccC
Q 042183 34 LFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNK 113 (179)
Q Consensus 34 l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~ 113 (179)
|-.|+..-+.+.+..++. +. ....+ ++-+|..++..+++.+|+++..-.... ...+ .
T Consensus 157 ledAV~AsN~~~i~~~Vt-----------dK--kdA~~-Am~~si~~~K~dva~~lls~f~ft~~d-------v~~~--~ 213 (284)
T PF06128_consen 157 LEDAVKASNYEEISNLVT-----------DK--KDAHQ-AMWLSIGNAKEDVALYLLSKFNFTKQD-------VASM--E 213 (284)
T ss_pred HHHHHhhcCHHHHHHHhc-----------ch--HHHHH-HHHHHhcccHHHHHHHHHhhcceecch-------hhhc--C
Confidence 667888888887765554 11 12345 888889888899999999876433220 0111 1
Q ss_pred CCCcHHHHHHH--cCCHHHHHHHHhcCC-CCC--CCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCC
Q 042183 114 EKHTALHEAVF--HKIVDVVKILTREDL-DYP--YSANNYNKTPLCMVAEYEHSSHMVVAILKNCTS 175 (179)
Q Consensus 114 ~g~t~l~~A~~--~g~~~~~~~Ll~~~~-~~~--~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~ 175 (179)
.+..-+.++-. .-...++++++.+|- +++ ..+-..|.|.|+-|+. ++..+++.+|++.|+-
T Consensus 214 ~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~K-y~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 214 KELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMK-YKNSEMIAFLLKYGAI 279 (284)
T ss_pred cchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHh-cCcHHHHHHHHHcCcc
Confidence 12223333322 234678899998873 332 2355679999999999 9999999999999973
No 119
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.73 E-value=0.0025 Score=49.82 Aligned_cols=51 Identities=20% Similarity=0.094 Sum_probs=42.0
Q ss_pred CCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHH
Q 042183 69 GDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILT 135 (179)
Q Consensus 69 g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll 135 (179)
-.| +||+|+..|..++|.+||..|+++.. +|..|.||...+. +.++-..++
T Consensus 430 tsT-~LH~aa~qg~~k~v~~~Leeg~Dp~~------------kd~~Grtpy~ls~---nkdVk~~F~ 480 (591)
T KOG2505|consen 430 TST-FLHYAAAQGARKCVKYFLEEGCDPST------------KDGAGRTPYSLSA---NKDVKSIFI 480 (591)
T ss_pred cch-HHHHHHhcchHHHHHHHHHhcCCchh------------cccCCCCcccccc---cHHHHHHHH
Confidence 345 99999999999999999999988877 9999999999887 444444443
No 120
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=96.40 E-value=0.088 Score=36.16 Aligned_cols=121 Identities=12% Similarity=0.053 Sum_probs=78.0
Q ss_pred HHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhh----------
Q 042183 33 NLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEE---------- 102 (179)
Q Consensus 33 ~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~---------- 102 (179)
-|..|++.+-+.++++.-+ .+ ...-....+ .+-.||+..+.++|+|+-+.-.-.+.....
T Consensus 49 Ll~HAVk~nmL~ILqkyke--~L-------~~~~~~~q~-LFElAC~~qkydiV~WI~qnL~i~~~~~iFdIA~~~kDls 118 (192)
T PF03158_consen 49 LLYHAVKYNMLSILQKYKE--DL-------ENERYLNQE-LFELACEEQKYDIVKWIGQNLHIYNPEDIFDIAFAKKDLS 118 (192)
T ss_pred HHHHHHHcCcHHHHHHHHH--Hh-------hcchhHHHH-HHHHHHHHccccHHHHHhhccCCCCchhhhhhhhhccchh
Confidence 3667899999999988854 11 101123445 678899999999999996554333332221
Q ss_pred --hhhHH--HHh-ccCCCC-------cHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHH
Q 042183 103 --LESGM--IRM-MNKEKH-------TALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAIL 170 (179)
Q Consensus 103 --~~~~~--~~~-~~~~g~-------t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll 170 (179)
..+-. ++- .+..+. .-|..|+..|...-+--.+++|.++. .+.|..|+. +++..++.+++
T Consensus 119 LyslGY~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~-------~~vls~Av~-ynhRkIL~yfi 190 (192)
T PF03158_consen 119 LYSLGYKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVD-------IIVLSQAVK-YNHRKILDYFI 190 (192)
T ss_pred HHHHHHHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCccc-------HHHHHHHHH-hhHHHHHHHhh
Confidence 11111 110 111111 24678899999998888888887753 288999999 99999998887
Q ss_pred h
Q 042183 171 K 171 (179)
Q Consensus 171 ~ 171 (179)
.
T Consensus 191 ~ 191 (192)
T PF03158_consen 191 R 191 (192)
T ss_pred c
Confidence 4
No 121
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=95.96 E-value=0.046 Score=38.84 Aligned_cols=97 Identities=8% Similarity=-0.017 Sum_probs=65.9
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHc--CCHHHHHHHHHhhcccCCchhhhhhHHHH
Q 042183 32 PNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKF--GHCDIVSVLIERAKLLQHEDEELESGMIR 109 (179)
Q Consensus 32 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~--g~~~~v~~ll~~~~~~~~~~~~~~~~~~~ 109 (179)
..+..|+..+.-+++.+|+++|-..... .+. -..+.. -+-|+... .+..++++++.+|-..... ..
T Consensus 181 ~Am~~si~~~K~dva~~lls~f~ft~~d-v~~--~~~~~y-dieY~LS~h~a~~kvL~~Fi~~Glv~vN~-------~F- 248 (284)
T PF06128_consen 181 QAMWLSIGNAKEDVALYLLSKFNFTKQD-VAS--MEKELY-DIEYLLSEHSASYKVLEYFINRGLVDVNK-------KF- 248 (284)
T ss_pred HHHHHHhcccHHHHHHHHHhhcceecch-hhh--cCcchh-hHHHHHhhcCCcHHHHHHHHhccccccch-------hh-
Confidence 5588899899999999999855432211 111 112333 45555543 4678999999988422110 11
Q ss_pred hccCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Q 042183 110 MMNKEKHTALHEAVFHKIVDVVKILTREDLD 140 (179)
Q Consensus 110 ~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~ 140 (179)
.+-..|.|-|.-|..++..+++.+|+++|+.
T Consensus 249 ~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 249 QKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred hccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence 1345799999999999999999999999985
No 122
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=94.74 E-value=0.097 Score=30.63 Aligned_cols=46 Identities=17% Similarity=0.254 Sum_probs=39.1
Q ss_pred HHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhc
Q 042183 73 SLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTRE 137 (179)
Q Consensus 73 ~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~ 137 (179)
.+..|+..|+.++++.+++.+. .+ ...+..|+...+-+++++|++.
T Consensus 9 tl~~Ai~GGN~eII~~c~~~~~----------------~~---~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 9 TLEYAIIGGNFEIINICLKKNK----------------PD---NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHhCCCHHHHHHHHHHhc----------------cH---HHHHHHHHHHhhHHHHHHHHHh
Confidence 5889999999999999997653 11 3579999999999999999986
No 123
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=93.51 E-value=0.22 Score=29.10 Aligned_cols=48 Identities=25% Similarity=0.215 Sum_probs=38.5
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhh
Q 042183 32 PNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERA 93 (179)
Q Consensus 32 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~ 93 (179)
..+..|+..|+.|+++.+++. . ..+ .. .+..|+...+-+++++|++..
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~------~----~~~---~~-~l~~AI~~H~n~i~~~l~~~y 55 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKK------N----KPD---ND-CLEYAIKSHNNEIADWLIENY 55 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHH------h----ccH---HH-HHHHHHHHhhHHHHHHHHHhc
Confidence 458899999999999988761 1 111 33 799999999999999999874
No 124
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=90.04 E-value=0.77 Score=31.69 Aligned_cols=45 Identities=20% Similarity=0.110 Sum_probs=36.7
Q ss_pred HHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHh
Q 042183 74 LLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTR 136 (179)
Q Consensus 74 L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~ 136 (179)
|..|+..|-...+...+++|.+.+ .++|..|+.++|-.++.+++.
T Consensus 147 l~~a~~kgll~F~letlkygg~~~------------------~~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 147 LEKAAAKGLLPFVLETLKYGGNVD------------------IIVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHCCCHHHHHHHHHcCCccc------------------HHHHHHHHHhhHHHHHHHhhc
Confidence 567888888888888888876432 279999999999999999875
No 125
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=48.24 E-value=55 Score=26.32 Aligned_cols=53 Identities=21% Similarity=0.164 Sum_probs=32.8
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHH-HHHHHcCCHHHHHHHHHhhc
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSL-LVAAKFGHCDIVSVLIERAK 94 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L-~~A~~~g~~~~v~~ll~~~~ 94 (179)
.++.+-.|.+.|+++....+.. . ..+...|. -| -.|...|+.++++.-..+..
T Consensus 321 ~~~rFeLAl~lg~L~~A~~~a~-----~------~~~~~~W~-~Lg~~AL~~g~~~lAe~c~~k~~ 374 (443)
T PF04053_consen 321 PDHRFELALQLGNLDIALEIAK-----E------LDDPEKWK-QLGDEALRQGNIELAEECYQKAK 374 (443)
T ss_dssp HHHHHHHHHHCT-HHHHHHHCC-----C------CSTHHHHH-HHHHHHHHTTBHHHHHHHHHHCT
T ss_pred hHHHhHHHHhcCCHHHHHHHHH-----h------cCcHHHHH-HHHHHHHHcCCHHHHHHHHHhhc
Confidence 3456889999999999876653 0 01122233 33 45667788888887776653
No 126
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=47.01 E-value=12 Score=26.45 Aligned_cols=48 Identities=17% Similarity=0.116 Sum_probs=36.3
Q ss_pred CCHHHHHHHHcCChHHHH-HHHHHHHHhhCcccccccCCCCCcHHHHHHHHc
Q 042183 30 IDPNLFKAAAAGNLEPFK-DMAREEILEICPSLLLQVNAKGDSRSLLVAAKF 80 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~-~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~ 80 (179)
.+.|||.|++-+..+++- ++++ .....|..+|..|.+|-. +|-+|...
T Consensus 222 Te~~LHk~iki~REDVl~LYfie--~dakiP~~LNd~D~nG~~-ALdiAL~~ 270 (280)
T KOG4591|consen 222 TENPLHKAIKIEREDVLFLYFIE--MDAKIPGILNDADHNGAL-ALDIALCR 270 (280)
T ss_pred CcchhHHhhhccccceeeehhhh--ccccccccccccCCCchH-HHHHHHHH
Confidence 456899999999888765 4443 233467788999999999 99888654
No 127
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=45.91 E-value=15 Score=25.92 Aligned_cols=52 Identities=19% Similarity=0.241 Sum_probs=33.5
Q ss_pred cCCCCCcHHHHHHHHcCCHHHHH-HHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHc
Q 042183 65 VNAKGDSRSLLVAAKFGHCDIVS-VLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFH 125 (179)
Q Consensus 65 ~~~~g~t~~L~~A~~~g~~~~v~-~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~ 125 (179)
.+++-+. |||-|+.-++.+++. ++++..+..+. ++|..|.+|-.+|.+|-..
T Consensus 218 Id~kTe~-~LHk~iki~REDVl~LYfie~dakiP~--------~LNd~D~nG~~ALdiAL~~ 270 (280)
T KOG4591|consen 218 IDGKTEN-PLHKAIKIEREDVLFLYFIEMDAKIPG--------ILNDADHNGALALDIALCR 270 (280)
T ss_pred HcCCCcc-hhHHhhhccccceeeehhhhccccccc--------cccccCCCchHHHHHHHHH
Confidence 3445566 888888888777544 35555554443 5666777787777777443
No 128
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=40.57 E-value=32 Score=27.58 Aligned_cols=22 Identities=5% Similarity=-0.068 Sum_probs=11.2
Q ss_pred CHHHHHHHhcCC-HHHHHHHHhcC
Q 042183 151 TPLCMVAEYEHS-SHMVVAILKNC 173 (179)
Q Consensus 151 tpl~~A~~~~~~-~~~~~~Ll~~g 173 (179)
.+++.+.. .|. .+|+++|++.|
T Consensus 407 ~af~~~~~-lgd~~~cv~lL~~~~ 429 (443)
T PF04053_consen 407 IAFQAALL-LGDVEECVDLLIETG 429 (443)
T ss_dssp HHHHHHHH-HT-HHHHHHHHHHTT
T ss_pred HHHHHHHH-cCCHHHHHHHHHHcC
Confidence 34555554 333 34666666654
No 129
>PF12645 HTH_16: Helix-turn-helix domain; InterPro: IPR024760 This domain appears to be a helix-turn-helix domain, suggesting a transcriptional regulatory protein. Some proteins with this domain are annotated as conjugative transposon proteins.
Probab=26.22 E-value=99 Score=17.38 Aligned_cols=22 Identities=18% Similarity=0.314 Sum_probs=18.3
Q ss_pred HHHHHHHcCCHHHHHHHHHhhc
Q 042183 73 SLLVAAKFGHCDIVSVLIERAK 94 (179)
Q Consensus 73 ~L~~A~~~g~~~~v~~ll~~~~ 94 (179)
++..+|..|+.+.+..++.+..
T Consensus 2 ~vI~~A~~GD~~A~~~IL~~y~ 23 (65)
T PF12645_consen 2 EVIKAAKQGDPEAMEEILKHYE 23 (65)
T ss_pred HHHHHHHcCCHHHHHHHHHHHH
Confidence 5678899999999898888764
No 130
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=21.90 E-value=19 Score=29.79 Aligned_cols=45 Identities=18% Similarity=0.177 Sum_probs=30.6
Q ss_pred CCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhc
Q 042183 81 GHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTRE 137 (179)
Q Consensus 81 g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~ 137 (179)
+....+-.|++.+...+. .|..+.+|+|+++-.|..++.+.++..
T Consensus 407 ~~ss~v~~lik~~~~~~~------------~d~f~~~p~~~~~~sgdp~~~~~~~~~ 451 (605)
T KOG3836|consen 407 NSSSLVFTLIKKGAHPND------------DDKFGFTPLHIPQISGDPRIIQLLLNC 451 (605)
T ss_pred CCccceeeeecccCccch------------hcccccccccccCCCCCHHHhhhhhhh
Confidence 333344445555555544 777888888888888888888877654
No 131
>TIGR02957 SigX4 RNA polymerase sigma-70 factor, TIGR02957 family. This group of sigma factors are members of the sigma-70 family (TIGR02937). They and appear by homology, tree building and bidirectional best hits, to represent a conserved family. This family is found in a limited number of bacterial lineages. This family includes apparent paralogous expansion in Streptomyces coelicolor A3(2), and multiple copies in Mycobacterium smegmatis MC2, Streptomyces avermitilis MA-4680 and Nocardia farcinica IFM10152.
Probab=20.19 E-value=1e+02 Score=22.84 Aligned_cols=53 Identities=13% Similarity=0.275 Sum_probs=37.2
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHh
Q 042183 32 PNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIER 92 (179)
Q Consensus 32 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~ 92 (179)
..+..|+..||++.+..||. ++.+...|.-|.. +--.....|...+..++...
T Consensus 171 ~~f~~a~~~gD~~~l~~lL~-------~dv~~~~dggg~~-~~~~~p~~G~~~v~~~~~~~ 223 (281)
T TIGR02957 171 ERFVEAAQTGDLDGLLELLA-------EDVVLYGDGGGKV-RAALRPIYGADRVARFFFGL 223 (281)
T ss_pred HHHHHHHHhCCHHHHHHHHh-------hceEEEecCCCcC-CCCCcccccHHHHHHHHHHH
Confidence 45889999999999999886 3334456666765 43334466788888887654
Done!