Query 042183
Match_columns 179
No_of_seqs 137 out of 2116
Neff 10.5
Searched_HMMs 29240
Date Mon Mar 25 05:46:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042183.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042183hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 3.5E-31 1.2E-35 180.3 16.6 132 26-178 33-164 (169)
2 4gpm_A Engineered protein OR26 100.0 1.8E-30 6.1E-35 176.8 15.9 128 30-178 4-131 (169)
3 1d9s_A Cyclin-dependent kinase 100.0 3.6E-29 1.2E-33 164.4 12.2 127 27-175 9-136 (136)
4 2jab_A H10-2-G3; HER2, darpin, 100.0 3.8E-28 1.3E-32 159.5 15.5 125 28-173 12-136 (136)
5 3twr_A Tankyrase-2; ankyrin re 100.0 1.7E-28 5.9E-33 166.0 14.2 134 25-178 3-136 (165)
6 2y1l_E Darpin-8.4; hydrolase-i 100.0 6.9E-28 2.4E-32 163.8 15.9 132 26-178 10-141 (169)
7 3v31_A Ankyrin repeat family A 100.0 8.5E-28 2.9E-32 162.9 15.1 125 32-177 5-129 (167)
8 1n0r_A 4ANK, 4 ankyrin repeats 100.0 1.2E-27 4.2E-32 154.4 15.2 125 30-175 2-126 (126)
9 4b93_B Ankyrin repeat domain-c 100.0 1.5E-27 5.1E-32 173.7 16.5 132 27-179 83-214 (269)
10 3v30_A DNA-binding protein rfx 100.0 2E-27 6.7E-32 161.8 15.5 125 30-175 36-160 (172)
11 3f6q_A Integrin-linked protein 100.0 1.5E-27 5.3E-32 163.4 15.1 126 32-177 7-132 (179)
12 1bi7_B P16INK4A, MTS1, multipl 100.0 1.5E-28 5.3E-33 165.0 9.8 128 29-178 11-139 (156)
13 2rfm_A Putative ankyrin repeat 100.0 1.7E-27 5.7E-32 164.9 15.2 132 26-178 31-162 (192)
14 1awc_B Protein (GA binding pro 100.0 1.7E-27 5.8E-32 159.3 14.4 126 31-178 3-128 (153)
15 1ihb_A P18-INK4C(INK6), cyclin 100.0 2.2E-27 7.4E-32 160.0 14.6 128 27-175 35-162 (162)
16 2y1l_E Darpin-8.4; hydrolase-i 99.9 3.1E-26 1E-30 155.6 16.6 125 28-173 45-169 (169)
17 3v30_A DNA-binding protein rfx 99.9 6.2E-27 2.1E-31 159.3 13.1 127 32-178 4-130 (172)
18 1ihb_A P18-INK4C(INK6), cyclin 99.9 5.7E-27 2E-31 157.9 12.6 124 30-175 5-128 (162)
19 2rfa_A Transient receptor pote 99.9 3.1E-26 1.1E-30 162.7 16.2 134 30-178 3-149 (232)
20 3f6q_A Integrin-linked protein 99.9 9.8E-27 3.4E-31 159.4 12.6 131 27-178 36-166 (179)
21 2vge_A RELA-associated inhibit 99.9 3E-27 1E-31 168.3 9.9 128 30-178 21-151 (229)
22 2f8y_A Notch homolog 1, transl 99.9 1.3E-25 4.6E-30 158.4 17.6 140 30-178 25-186 (223)
23 3aji_A 26S proteasome non-ATPa 99.9 1.1E-25 3.7E-30 159.7 17.2 142 28-178 38-200 (231)
24 1ikn_D Protein (I-kappa-B-alph 99.9 3.1E-26 1E-30 163.3 14.3 136 28-178 43-179 (236)
25 1awc_B Protein (GA binding pro 99.9 4.7E-26 1.6E-30 152.3 14.3 122 27-169 31-152 (153)
26 3v31_A Ankyrin repeat family A 99.9 8.4E-26 2.9E-30 153.0 15.8 128 27-175 33-160 (167)
27 2rfm_A Putative ankyrin repeat 99.9 4.4E-26 1.5E-30 157.7 14.7 125 28-173 66-190 (192)
28 1yyh_A HN1;, notch 1, ankyrin 99.9 5.9E-26 2E-30 163.5 15.8 142 28-178 55-218 (253)
29 1bd8_A P19INK4D CDK4/6 inhibit 99.9 6.3E-26 2.1E-30 151.9 14.9 120 29-171 35-154 (156)
30 2dzn_A Probable 26S proteasome 99.9 9.4E-26 3.2E-30 159.6 15.7 128 30-178 72-203 (228)
31 1oy3_D Transcription factor in 99.9 8.9E-26 3.1E-30 164.3 15.5 102 62-178 151-253 (282)
32 1oy3_D Transcription factor in 99.9 1.4E-25 4.7E-30 163.3 15.9 146 28-179 7-221 (282)
33 3aji_A 26S proteasome non-ATPa 99.9 2.3E-25 7.9E-30 158.0 16.5 128 30-177 6-133 (231)
34 3twr_A Tankyrase-2; ankyrin re 99.9 8.4E-26 2.9E-30 152.7 13.6 123 30-174 42-164 (165)
35 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.6E-25 5.5E-30 149.9 14.7 126 31-178 3-128 (156)
36 1s70_B 130 kDa myosin-binding 99.9 3E-25 1E-29 163.1 17.2 142 28-178 71-260 (299)
37 1yyh_A HN1;, notch 1, ankyrin 99.9 1.6E-25 5.6E-30 161.2 15.3 134 36-178 29-185 (253)
38 2pnn_A Transient receptor pote 99.9 4.4E-26 1.5E-30 165.8 12.3 130 28-177 99-261 (273)
39 2xai_A ASB-9, ankyrin repeat a 99.9 2.5E-25 8.5E-30 161.0 15.9 128 28-177 34-161 (261)
40 2f8y_A Notch homolog 1, transl 99.9 4.6E-25 1.6E-29 155.7 16.8 125 31-176 93-217 (223)
41 4b93_B Ankyrin repeat domain-c 99.9 1.1E-25 3.9E-30 163.7 14.0 132 32-178 13-180 (269)
42 3hra_A Ankyrin repeat family p 99.9 4E-25 1.4E-29 153.7 16.2 129 29-178 38-173 (201)
43 1ycs_B 53BP2, P53BP2; ankyrin 99.9 2.1E-26 7.3E-31 164.7 9.8 127 30-177 37-166 (239)
44 1k1a_A B-cell lymphoma 3-encod 99.9 5.1E-25 1.7E-29 157.0 16.7 142 28-178 44-211 (241)
45 3c5r_A BARD-1, BRCA1-associate 99.9 1.2E-26 4E-31 152.5 7.4 130 25-175 5-134 (137)
46 3b7b_A Euchromatic histone-lys 99.9 5.6E-25 1.9E-29 156.6 16.7 127 32-178 79-205 (237)
47 2rfa_A Transient receptor pote 99.9 5.7E-25 2E-29 156.1 16.6 141 27-176 34-184 (232)
48 1ikn_D Protein (I-kappa-B-alph 99.9 9.2E-26 3.1E-30 160.8 12.0 135 27-176 75-210 (236)
49 3hra_A Ankyrin repeat family p 99.9 6.7E-25 2.3E-29 152.5 15.9 127 27-173 69-201 (201)
50 3utm_A Tankyrase-1; tankyrase, 99.9 8.1E-25 2.8E-29 163.5 17.1 140 30-178 91-308 (351)
51 2xai_A ASB-9, ankyrin repeat a 99.9 8.7E-25 3E-29 158.2 16.4 128 28-178 67-194 (261)
52 3b7b_A Euchromatic histone-lys 99.9 1E-24 3.5E-29 155.2 16.5 140 30-178 11-172 (237)
53 3jxi_A Vanilloid receptor-rela 99.9 1E-25 3.5E-30 162.6 11.3 127 29-175 92-250 (260)
54 4hbd_A KN motif and ankyrin re 99.9 3.6E-25 1.2E-29 161.6 14.2 126 27-173 108-273 (276)
55 2etb_A Transient receptor pote 99.9 1.9E-25 6.5E-30 161.0 12.6 128 28-175 88-246 (256)
56 3utm_A Tankyrase-1; tankyrase, 99.9 5E-25 1.7E-29 164.7 15.3 131 28-178 22-152 (351)
57 3aaa_C Myotrophin, protein V-1 99.9 1.1E-25 3.8E-30 145.2 10.2 115 30-165 7-121 (123)
58 3lvq_E ARF-GAP with SH3 domain 99.9 3.9E-25 1.3E-29 173.4 15.2 125 32-177 134-267 (497)
59 3d9h_A CDNA FLJ77766, highly s 99.9 1.4E-24 4.7E-29 159.1 17.1 141 28-177 57-217 (285)
60 1n0q_A 3ANK, 3 ankyrin repeats 99.9 5.8E-25 2E-29 135.2 12.3 93 68-175 1-93 (93)
61 3ehr_A Osteoclast-stimulating 99.9 5.5E-26 1.9E-30 160.7 8.7 127 30-177 73-200 (222)
62 2dzn_A Probable 26S proteasome 99.9 1.6E-24 5.6E-29 153.2 16.2 130 28-178 34-169 (228)
63 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.2E-25 4E-30 160.8 10.4 128 29-178 4-131 (239)
64 1dcq_A PYK2-associated protein 99.9 9.9E-25 3.4E-29 159.4 15.4 123 32-175 132-263 (278)
65 1k1a_A B-cell lymphoma 3-encod 99.9 2.7E-24 9.1E-29 153.2 17.3 147 27-178 6-178 (241)
66 1n11_A Ankyrin; clathrin, BAND 99.9 1.3E-24 4.5E-29 167.5 16.8 126 32-178 247-372 (437)
67 3kea_A K1L; tropism, ANK repea 99.9 3.4E-25 1.2E-29 162.3 12.6 127 27-176 28-155 (285)
68 1s70_B 130 kDa myosin-binding 99.9 1.4E-24 4.9E-29 159.4 15.8 128 30-178 40-227 (299)
69 1wdy_A 2-5A-dependent ribonucl 99.9 2.3E-24 7.8E-29 156.7 16.4 131 29-179 147-282 (285)
70 3ljn_A Hypothetical protein; a 99.9 5.3E-25 1.8E-29 166.1 13.2 128 27-175 135-269 (364)
71 1wdy_A 2-5A-dependent ribonucl 99.9 2.8E-24 9.4E-29 156.3 16.6 128 30-178 5-133 (285)
72 4g8k_A 2-5A-dependent ribonucl 99.9 9.8E-25 3.3E-29 163.1 14.1 142 29-178 24-197 (337)
73 2etb_A Transient receptor pote 99.9 1.2E-24 4.2E-29 156.7 14.1 142 31-178 3-167 (256)
74 3d9h_A CDNA FLJ77766, highly s 99.9 3.8E-24 1.3E-28 156.8 16.1 142 28-179 90-251 (285)
75 3ljn_A Hypothetical protein; a 99.9 1.1E-24 3.6E-29 164.5 13.5 99 65-178 134-239 (364)
76 1sw6_A Regulatory protein SWI6 99.9 1E-24 3.5E-29 162.8 13.1 132 27-179 128-312 (327)
77 3kea_A K1L; tropism, ANK repea 99.9 4.2E-25 1.4E-29 161.9 10.3 140 30-178 62-223 (285)
78 2b0o_E UPLC1; arfgap, structur 99.9 2E-24 6.9E-29 159.5 13.8 123 32-175 153-284 (301)
79 1n11_A Ankyrin; clathrin, BAND 99.9 4.1E-24 1.4E-28 164.7 15.7 123 31-174 15-137 (437)
80 2pnn_A Transient receptor pote 99.9 1.8E-24 6.2E-29 157.2 12.0 136 27-177 51-220 (273)
81 4hbd_A KN motif and ankyrin re 99.9 2.4E-24 8.2E-29 157.2 12.4 91 29-138 182-273 (276)
82 3jxi_A Vanilloid receptor-rela 99.9 1.1E-24 3.7E-29 157.2 10.4 134 28-176 44-211 (260)
83 3eu9_A Huntingtin-interacting 99.9 1.4E-23 4.9E-28 149.0 15.9 127 31-177 10-136 (240)
84 3deo_A Signal recognition part 99.9 7.1E-24 2.4E-28 145.8 13.3 122 29-172 43-181 (183)
85 3ui2_A Signal recognition part 99.9 2.1E-24 7E-29 154.9 11.0 123 29-173 44-183 (244)
86 4g8k_A 2-5A-dependent ribonucl 99.9 1.4E-23 4.7E-28 156.9 15.3 129 30-178 168-329 (337)
87 3jue_A Arfgap with coiled-coil 99.9 1.1E-23 3.9E-28 159.1 14.1 122 31-173 200-324 (368)
88 3t8k_A Uncharacterized protein 99.9 3.3E-24 1.1E-28 148.0 8.8 124 29-173 37-177 (186)
89 3c5r_A BARD-1, BRCA1-associate 99.9 3.3E-23 1.1E-27 135.9 13.0 100 64-178 5-104 (137)
90 3t8k_A Uncharacterized protein 99.9 1.9E-24 6.5E-29 149.2 7.2 125 32-179 8-150 (186)
91 2fo1_E LIN-12 protein; beta-ba 99.9 3.5E-23 1.2E-27 157.0 14.3 141 29-175 198-371 (373)
92 2fo1_E LIN-12 protein; beta-ba 99.9 3.4E-23 1.2E-27 157.0 14.2 143 27-178 163-341 (373)
93 3eu9_A Huntingtin-interacting 99.9 8.8E-23 3E-27 145.0 14.9 138 31-177 77-237 (240)
94 1d9s_A Cyclin-dependent kinase 99.9 1.5E-23 5E-28 137.5 9.8 103 60-178 3-106 (136)
95 3aaa_C Myotrophin, protein V-1 99.9 7.9E-23 2.7E-27 131.7 11.9 98 66-178 4-101 (123)
96 2l6b_A NR1C; ankyrin, consensu 99.9 1.4E-23 4.7E-28 133.7 7.7 99 64-177 4-102 (115)
97 2vge_A RELA-associated inhibit 99.9 2.6E-22 8.8E-27 142.8 12.1 106 58-178 10-115 (229)
98 1n0q_A 3ANK, 3 ankyrin repeats 99.9 5.9E-22 2E-26 121.6 11.1 92 30-140 2-93 (93)
99 2jab_A H10-2-G3; HER2, darpin, 99.9 4.1E-22 1.4E-26 130.6 10.6 99 65-178 10-108 (136)
100 1n0r_A 4ANK, 4 ankyrin repeats 99.9 3.1E-21 1.1E-25 124.1 13.0 96 68-178 1-96 (126)
101 3ehr_A Osteoclast-stimulating 99.9 8.1E-22 2.8E-26 139.2 10.5 101 63-178 67-168 (222)
102 2zgd_A 3 repeat synthetic anky 99.9 2E-21 6.8E-26 122.9 10.1 94 61-169 16-109 (110)
103 1bi7_B P16INK4A, MTS1, multipl 99.9 1.2E-21 4.3E-26 131.2 8.4 100 63-178 6-106 (156)
104 3deo_A Signal recognition part 99.9 1.5E-21 5.1E-26 134.1 8.6 98 65-178 40-138 (183)
105 2aja_A Ankyrin repeat family p 99.8 9.5E-23 3.3E-27 154.5 0.9 128 31-174 93-223 (376)
106 2l6b_A NR1C; ankyrin, consensu 99.8 1.1E-21 3.6E-26 124.9 5.6 107 27-153 6-112 (115)
107 3ui2_A Signal recognition part 99.8 3.1E-21 1.1E-25 138.3 8.3 98 65-178 41-139 (244)
108 1sw6_A Regulatory protein SWI6 99.8 7.8E-21 2.7E-25 141.7 9.0 127 27-161 161-327 (327)
109 2b0o_E UPLC1; arfgap, structur 99.8 1.1E-20 3.6E-25 139.6 6.7 109 28-163 188-299 (301)
110 2aja_A Ankyrin repeat family p 99.8 3.6E-21 1.2E-25 145.9 -1.4 120 30-176 128-251 (376)
111 2zgd_A 3 repeat synthetic anky 99.8 1.1E-18 3.6E-23 110.3 9.7 88 28-134 22-109 (110)
112 3jue_A Arfgap with coiled-coil 99.8 3.9E-18 1.3E-22 128.9 11.8 96 68-178 198-296 (368)
113 1dcq_A PYK2-associated protein 99.8 3.6E-18 1.2E-22 124.7 10.5 95 28-141 167-264 (278)
114 3lvq_E ARF-GAP with SH3 domain 99.7 5.7E-18 1.9E-22 132.8 10.6 105 28-158 169-276 (497)
115 1gp8_A Protein (scaffolding pr 76.1 1.4 4.8E-05 21.2 1.5 20 30-49 13-32 (40)
116 3zrh_A Ubiquitin thioesterase 63.9 23 0.00079 27.0 6.3 61 77-137 29-91 (454)
117 3zrh_A Ubiquitin thioesterase 32.9 1.5E+02 0.0051 22.7 6.4 51 121-172 28-91 (454)
118 3mkq_B Coatomer subunit alpha; 29.7 1.2E+02 0.0042 20.0 6.5 121 30-172 8-140 (177)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.98 E-value=3.5e-31 Score=180.33 Aligned_cols=132 Identities=24% Similarity=0.283 Sum_probs=115.7
Q ss_pred ccccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhh
Q 042183 26 SQLQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELES 105 (179)
Q Consensus 26 ~~~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~ 105 (179)
......+|||.|+..++.+.++.|++ .+..++.+|..|.| |||+|+..|+.+++++|+++|++++.
T Consensus 33 ~d~~g~t~l~~a~~~~~~~~~~~ll~------~gad~~~~d~~g~T-pLh~A~~~g~~~~v~~Ll~~gadvn~------- 98 (169)
T 4gpm_A 33 SDSDGRTPLHHAAENGHKEVVKLLIS------KGADVNAKDSDGRT-PLHHAAENGHKEVVKLLISKGADVNA------- 98 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTTC-------
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHh------cccchhhhccCCCC-HHHHHHHcCCHHHHHHHHHCcCCCCC-------
Confidence 34456688999999999999988887 67788889999999 99999999999999999999998877
Q ss_pred HHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 106 GMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 106 ~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
+|..|+||||+|+..|+.+++++|++.|++++ .+|..|+|||++|+. .|+.+++++|+++|+++++
T Consensus 99 -----~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~-~~d~~G~TpL~~A~~-~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 99 -----KDSDGRTPLHHAAENGHKEVVKLLISKGADVN-TSDSDGRTPLDLARE-HGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp -----CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHH-TTCHHHHHHHHTC------
T ss_pred -----CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHH-cCCHHHHHHHHHCCCCcCC
Confidence 99999999999999999999999999999986 899999999999999 9999999999999999874
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=1.8e-30 Score=176.82 Aligned_cols=128 Identities=25% Similarity=0.354 Sum_probs=121.3
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHH
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIR 109 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~ 109 (179)
..++|+.||+.|+.+.|+.|++ .+.+++.+|..|.| |||+|+..++.+++++|++.|++++.
T Consensus 4 lg~~L~~Aa~~G~~~~v~~Ll~------~Gadvn~~d~~g~t-~l~~a~~~~~~~~~~~ll~~gad~~~----------- 65 (169)
T 4gpm_A 4 LGKRLIEAAENGNKDRVKDLIE------NGADVNASDSDGRT-PLHHAAENGHKEVVKLLISKGADVNA----------- 65 (169)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTTC-----------
T ss_pred HHHHHHHHHHcCCHHHHHHHHH------CCCCCCCcCCCCCC-HHHHHHHcCCHHHHHHHHhcccchhh-----------
Confidence 3467999999999999999998 67888999999999 99999999999999999999998887
Q ss_pred hccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 110 MMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 110 ~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
++..|+||||+|+..|+.+++++|++.|++++ .+|..|+||||+|+. .|+.+++++|+++|++++.
T Consensus 66 -~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn-~~d~~G~TpLh~A~~-~g~~~~v~~Ll~~gad~~~ 131 (169)
T 4gpm_A 66 -KDSDGRTPLHHAAENGHKEVVKLLISKGADVN-AKDSDGRTPLHHAAE-NGHKEVVKLLISKGADVNT 131 (169)
T ss_dssp -CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHH-TTCHHHHHHHHHTTCCTTC
T ss_pred -hccCCCCHHHHHHHcCCHHHHHHHHHCcCCCC-CCCCCCCCHHHHHHH-cCCHHHHHHHHHcCCCccc
Confidence 99999999999999999999999999999987 899999999999999 9999999999999999865
No 3
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=3.6e-29 Score=164.45 Aligned_cols=127 Identities=15% Similarity=0.213 Sum_probs=118.8
Q ss_pred cccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhH
Q 042183 27 QLQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESG 106 (179)
Q Consensus 27 ~~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~ 106 (179)
.....++||.|+..|+.++++.|++ .+..++.+|..|.| |||+|+. |+.+++++|++++++++.
T Consensus 9 ~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t-~L~~A~~-~~~~~v~~Ll~~g~~~~~-------- 72 (136)
T 1d9s_A 9 GGSSDAGLATAAARGQVETVRQLLE------AGADPNALNRFGRR-PIQVMMM-GSAQVAELLLLHGAEPNC-------- 72 (136)
T ss_dssp CCCCSCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTCCT-TTTTSTT-SCHHHHHHHHHHTCCSSC--------
T ss_pred CCCCccHHHHHHHcCCHHHHHHHHH------cCCCcCCcCCCCCC-HHHHHHc-CCHHHHHHHHHCCCCCCC--------
Confidence 4456689999999999999999998 56778889999999 9999999 999999999999998887
Q ss_pred HHHhccCC-CCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCC
Q 042183 107 MIRMMNKE-KHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTS 175 (179)
Q Consensus 107 ~~~~~~~~-g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~ 175 (179)
++.. |+||||+|+..|+.+++++|++.|++++ ..|..|.|||++|+. .++.+++++|+++|+|
T Consensus 73 ----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~-~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 73 ----ADPATLTRPVHDAAREGFLDTLVVLHRAGARLD-VCDAWGRLPVDLAEE-QGHRDIARYLHAATGD 136 (136)
T ss_dssp ----CBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCC-CCSSSSSCHHHHHHH-HTCHHHHHHHHHHHCC
T ss_pred ----cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHH-cCCHHHHHHHHHcCCC
Confidence 8888 9999999999999999999999999986 899999999999999 9999999999999986
No 4
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.96 E-value=3.8e-28 Score=159.53 Aligned_cols=125 Identities=19% Similarity=0.279 Sum_probs=116.3
Q ss_pred ccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHH
Q 042183 28 LQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGM 107 (179)
Q Consensus 28 ~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~ 107 (179)
....++||.|+..|+.+.++.|++ .+..++..|..|.| |||+|+..|+.+++++|++++++++.
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~------~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~--------- 75 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMA------NGADVNAKDEYGLT-PLYLATAHGHLEIVEVLLKNGADVNA--------- 75 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHH------TTCCTTCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCTTC---------
T ss_pred ccccHHHHHHHHhCCHHHHHHHHH------cCCCCCCcCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCCc---------
Confidence 345688999999999999999988 56778889999999 99999999999999999999998877
Q ss_pred HHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcC
Q 042183 108 IRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNC 173 (179)
Q Consensus 108 ~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g 173 (179)
++..|+||||+|+..|+.+++++|++.|++++ ..|..|.|||++|+. .|+.+++++|++.|
T Consensus 76 ---~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~tpl~~A~~-~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 76 ---VDAIGFTPLHLAAFIGHLEIAEVLLKHGADVN-AQDKFGKTAFDISIG-NGNEDLAEILQKLN 136 (136)
T ss_dssp ---CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHH-TTCHHHHHHHHHC-
T ss_pred ---CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-CcCCCCCCHHHHHHH-CCCHHHHHHHHHcC
Confidence 89999999999999999999999999999976 889999999999999 99999999999886
No 5
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=1.7e-28 Score=165.99 Aligned_cols=134 Identities=19% Similarity=0.272 Sum_probs=115.4
Q ss_pred CccccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhh
Q 042183 25 ISQLQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELE 104 (179)
Q Consensus 25 ~~~~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~ 104 (179)
+......++|+.|++.|+.+.++.|++ ..+..++..+..|.| |||+|+..|+.+++++|++++.+++.
T Consensus 3 ~~~~~~~~~l~~A~~~g~~~~v~~ll~-----~~~~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~------ 70 (165)
T 3twr_A 3 MGNSEADRQLLEAAKAGDVETVKKLCT-----VQSVNCRDIEGRQST-PLHFAAGYNRVSVVEYLLQHGADVHA------ 70 (165)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHCC-----TTTTTCCCTTTTCCC-HHHHHHHTTCHHHHHHHHHTTCCTTC------
T ss_pred CCcchhhHHHHHHHHhCCHHHHHHHHH-----cCCCCccccccCCCC-HHHHHHHcChHHHHHHHHhcCCCCCc------
Confidence 445556688999999999999988865 455566778888899 99999999999999999999988777
Q ss_pred hHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 105 SGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 105 ~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
++..|+||||+|+..|+.+++++|++.|++++ ..|..|.||||+|+. .|+.+++++|+++|++++.
T Consensus 71 ------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~ga~~~~ 136 (165)
T 3twr_A 71 ------KDKGGLVPLHNACSYGHYEVAELLVKHGAVVN-VADLWKFTPLHEAAA-KGKYEICKLLLQHGADPTK 136 (165)
T ss_dssp ------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHH-TTCHHHHHHHHHTTCCTTC
T ss_pred ------cCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCC-CcCCCCCCHHHHHHH-cCCHHHHHHHHHcCCCCcc
Confidence 88899999999999999999999999999976 788899999999999 9999999999999988764
No 6
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=6.9e-28 Score=163.79 Aligned_cols=132 Identities=23% Similarity=0.282 Sum_probs=113.0
Q ss_pred ccccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhh
Q 042183 26 SQLQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELES 105 (179)
Q Consensus 26 ~~~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~ 105 (179)
+.....++|+.|++.|+.++++.|++ .+..++..|..|.| |||+|+..|+.+++++|+++|.+.+.
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~------~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~------- 75 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMA------NGADVNAEDASGWT-PLHLAAFNGHLEIVEVLLKNGADVNA------- 75 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHH------TTCCTTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTTC-------
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHH------CCCCCCCCCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCCc-------
Confidence 34445578999999999999999887 56677888889999 99999999999999999999887776
Q ss_pred HHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 106 GMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 106 ~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
++..|.||||+|+..|+.+++++|++.|++++ ..|..|.||||+|+. .|+.+++++|+++|++++.
T Consensus 76 -----~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~~~~ 141 (169)
T 2y1l_E 76 -----VDHAGMTPLRLAALFGHLEIVEVLLKNGADVN-ANDMEGHTPLHLAAM-FGHLEIVEVLLKNGADVNA 141 (169)
T ss_dssp -----CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHH-TTCHHHHHHHHHTTCCTTC
T ss_pred -----cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHH-cCCHHHHHHHHHcCCCCCC
Confidence 88889999999999999999999999998876 788889999999999 9999999999999888753
No 7
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=8.5e-28 Score=162.86 Aligned_cols=125 Identities=20% Similarity=0.243 Sum_probs=67.5
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhc
Q 042183 32 PNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMM 111 (179)
Q Consensus 32 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~ 111 (179)
++||.|+..|+.+.++.|++ .+..++..|..|.| |||+|+..|+.+++++|++++.+++. +
T Consensus 5 t~L~~A~~~g~~~~v~~ll~------~~~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~------------~ 65 (167)
T 3v31_A 5 LSVHQLAAQGEMLYLATRIE------QENVINHTDEEGFT-PLMWAAAHGQIAVVEFLLQNGADPQL------------L 65 (167)
T ss_dssp CCHHHHHHTTCHHHHHHHHH------HSSCTTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTTC------------C
T ss_pred chHHHHHHCCCHHHHHHHHH------cCCCcCCCCCCCCC-HHHHHHHCCCHHHHHHHHHcCCCCCC------------c
Confidence 44555555555555555554 23344555555555 55555555555555555555554444 4
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCC
Q 042183 112 NKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVS 177 (179)
Q Consensus 112 ~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~ 177 (179)
+..|.||||+|+..|+.+++++|++.|++++ ..|..|.||||+|+. .|+.+++++|+++|++++
T Consensus 66 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~~~ 129 (167)
T 3v31_A 66 GKGRESALSLACSKGYTDIVKMLLDCGVDVN-EYDWNGGTPLLYAVH-GNHVKCVKMLLESGADPT 129 (167)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT-CCCTTSCCHHHHHHH-TTCHHHHHHHHHTTCCTT
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC-cCCCCCCCHHHHHHH-cCCHHHHHHHHHcCCCCC
Confidence 5555555555555555555555555555543 445555555555555 555555555555555443
No 8
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.96 E-value=1.2e-27 Score=154.43 Aligned_cols=125 Identities=26% Similarity=0.317 Sum_probs=116.8
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHH
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIR 109 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~ 109 (179)
..++||.|+..|+.++++.|++ .+..++..+..|.| |||+|+..|+.+++++|++++.+++.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~------~~~~~~~~~~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~~~----------- 63 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLE------AGADVNAKDKNGRT-PLHLAARNGHLEVVKLLLEAGADVNA----------- 63 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHH------HTCCTTCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCTTC-----------
T ss_pred CccHHHHHHHcCcHHHHHHHHH------cCCCCCCcCCCCCc-HHHHHHHcCcHHHHHHHHHcCCCCcc-----------
Confidence 3578999999999999999987 45667888999999 99999999999999999999998877
Q ss_pred hccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCC
Q 042183 110 MMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTS 175 (179)
Q Consensus 110 ~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~ 175 (179)
++..|.||||+|+..|+.+++++|++.|+++. ..|..|.|||++|+. .|+.+++++|+++|+|
T Consensus 64 -~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~l~~A~~-~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 64 -KDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-AKDKNGRTPLHLAAR-NGHLEVVKLLLEAGAY 126 (126)
T ss_dssp -CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHH-TTCHHHHHHHHHHTCC
T ss_pred -cCCCCCcHHHHHHHcChHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHH-cCcHHHHHHHHHcCCC
Confidence 89999999999999999999999999999976 889999999999999 9999999999999986
No 9
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.96 E-value=1.5e-27 Score=173.66 Aligned_cols=132 Identities=20% Similarity=0.146 Sum_probs=122.3
Q ss_pred cccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhH
Q 042183 27 QLQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESG 106 (179)
Q Consensus 27 ~~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~ 106 (179)
.....+|||.|+..|+.++++.|++ .+..++..+..|.| |+|+|+..++.+++++|++.|++++.
T Consensus 83 d~~G~TpLh~A~~~g~~~~v~~Ll~------~~a~~~~~~~~g~t-~l~~a~~~~~~~~~~~Ll~~g~~~n~-------- 147 (269)
T 4b93_B 83 SQDGSSPLHVAALHGRADLIPLLLK------HGANAGARNADQAV-PLHLACQQGHFQVVKCLLDSNAKPNK-------- 147 (269)
T ss_dssp CTTSCCHHHHHHHTTCTTHHHHHHH------TTCCTTCCCTTCCC-HHHHHHHHTCHHHHHHHHHTTCCSCC--------
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHh------cCCCcCccCCCCCC-ccccccccChHHHHHHHHHCCCCCCC--------
Confidence 3445689999999999999999987 66778889999999 99999999999999999999998887
Q ss_pred HHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCCC
Q 042183 107 MIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSHR 179 (179)
Q Consensus 107 ~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~r 179 (179)
+|..|+||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+. .|+.+++++|+++|+|++.+
T Consensus 148 ----~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn-~~~~~g~t~Lh~A~~-~g~~~~v~~Ll~~Gad~~~~ 214 (269)
T 4b93_B 148 ----KDLSGNTPLIYACSGGHHELVALLLQHGASIN-ASNNKGNTALHEAVI-EKHVFVVELLLLHGASVQVL 214 (269)
T ss_dssp ----CCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTT-CBCTTSCBHHHHHHH-TTCHHHHHHHHHTTCCSCCC
T ss_pred ----CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC-ccccCCCcHHHHHHH-cCCHHHHHHHHHCCCCCCCc
Confidence 99999999999999999999999999999987 899999999999999 99999999999999998753
No 10
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=2e-27 Score=161.80 Aligned_cols=125 Identities=21% Similarity=0.149 Sum_probs=85.7
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHH
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIR 109 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~ 109 (179)
..++||.|+..|+.++++.|++ .+..++..+..|.| |||+|+..|+.+++++|++++.+++.
T Consensus 36 g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~----------- 97 (172)
T 3v30_A 36 GFTPLIWASAFGEIETVRFLLE------WGADPHILAKERES-ALSLASTGGYTDIVGLLLERDVDINI----------- 97 (172)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHH------HTCCTTCCCTTCCC-HHHHHHHTTCHHHHHHHHTTTCCTTC-----------
T ss_pred CCCHHHHHHHcCCHHHHHHHHH------cCCCchhhcccCCC-HHHHHHHCCCHHHHHHHHHcCCCCCC-----------
Confidence 4466777777777777766665 34455666666777 77777777777777777776666555
Q ss_pred hccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCC
Q 042183 110 MMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTS 175 (179)
Q Consensus 110 ~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~ 175 (179)
++..|+||||+|+..|+.+++++|++.|+++. ..+..|.|||++|+. .|+.+++++|+++|++
T Consensus 98 -~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~-~~~~~~~~~L~~~~~~ 160 (172)
T 3v30_A 98 -YDWNGGTPLLYAVRGNHVKCVEALLARGADLT-TEADSGYTPMDLAVA-LGYRKVQQVIENHILK 160 (172)
T ss_dssp -CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred -CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHH-hCcHHHHHHHHHHHHH
Confidence 66677777777777777777777777777755 666677777777777 7777777777776644
No 11
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=1.5e-27 Score=163.42 Aligned_cols=126 Identities=25% Similarity=0.255 Sum_probs=88.5
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhc
Q 042183 32 PNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMM 111 (179)
Q Consensus 32 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~ 111 (179)
++|+.|+..|+.+.++.|++ ..+..++..+..|.| |||+|+..|+.+++++|+++|++++. +
T Consensus 7 ~~l~~A~~~g~~~~v~~ll~-----~~~~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~------------~ 68 (179)
T 3f6q_A 7 DDIFTQCREGNAVAVRLWLD-----NTENDLNQGDDHGFS-PLHWACREGRSAVVEMLIMRGARINV------------M 68 (179)
T ss_dssp CCHHHHHHHTCHHHHHHHHH-----CTTSCTTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTTC------------C
T ss_pred HHHHHHHHcCCHHHHHHHHh-----cCcccccccCCCCCC-HHHHHHHcCcHHHHHHHHHcCCCCCC------------c
Confidence 45777777777777776665 335556667777777 77777777777777777777766655 6
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCC
Q 042183 112 NKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVS 177 (179)
Q Consensus 112 ~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~ 177 (179)
+..|+||||+|+..|+.+++++|++.|++++ ..|..|.||||+|+. .|+.+++++|+++|++++
T Consensus 69 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~d~~g~t~L~~A~~-~~~~~~v~~Ll~~ga~~~ 132 (179)
T 3f6q_A 69 NRGDDTPLHLAASHGHRDIVQKLLQYKADIN-AVNEHGNVPLHYACF-WGQDQVAEDLVANGALVS 132 (179)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHH-TTCHHHHHHHHHTTCCSS
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHH-cCCHHHHHHHHHCCCCcc
Confidence 6677777777777777777777777777765 666777777777777 777777777777776654
No 12
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=1.5e-28 Score=164.99 Aligned_cols=128 Identities=15% Similarity=0.187 Sum_probs=115.5
Q ss_pred cCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHH
Q 042183 29 QIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMI 108 (179)
Q Consensus 29 ~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~ 108 (179)
...++||.|+..|+.+.++.|++ .+..++..+..|.| |||+|+ .|+.+++++|+++|++++.
T Consensus 11 ~~~t~L~~A~~~g~~~~v~~Ll~------~g~~~~~~~~~g~t-~L~~A~-~~~~~~v~~Ll~~g~~~~~---------- 72 (156)
T 1bi7_B 11 PSADWLATAAARGRVEEVRALLE------AGANPNAPNSYGRR-PIQVMM-MGSARVAELLLLHGAEPNC---------- 72 (156)
T ss_dssp CSTTHHHHHHHHTCHHHHHHHHT------TTCCTTCCCSSSCC-TTTSSC-TTCHHHHHHHHTTTCCCCC----------
T ss_pred cchHHHHHHHHcCCHHHHHHHHH------cCCCCCCCCCCCCC-HHHHHH-cCCHHHHHHHHHcCCCCCC----------
Confidence 35689999999999999999987 56788899999999 999985 8999999999999998887
Q ss_pred HhccCCCCc-HHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 109 RMMNKEKHT-ALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 109 ~~~~~~g~t-~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
++..|+| |||+|+..|+.+++++|++.|++++ .+|..|.||||+|+. .|+.+++++|+++|++++.
T Consensus 73 --~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~-~~~~~~v~~Ll~~ga~~~~ 139 (156)
T 1bi7_B 73 --ADPATLTRPVHDAAREGFLDTLVVLHRAGARLD-VRDAWGRLPVDLAEE-LGHRDVARYLRAAAGGTRG 139 (156)
T ss_dssp --CCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSS-CCCTTCCCHHHHHHH-HTCHHHHHHHSSCC-----
T ss_pred --cCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHH-hCHHHHHHHHHHcCCCCCc
Confidence 9999999 9999999999999999999999986 899999999999999 9999999999999998764
No 13
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=1.7e-27 Score=164.93 Aligned_cols=132 Identities=16% Similarity=0.161 Sum_probs=117.4
Q ss_pred ccccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhh
Q 042183 26 SQLQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELES 105 (179)
Q Consensus 26 ~~~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~ 105 (179)
......+|||.|+..|+.+.++.|++ .+..++..+..|.| |||+|+..|+.+++++|++++++++.
T Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~------~~~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~------- 96 (192)
T 2rfm_A 31 RDSYNRTPLMVACMLGMENAIDKLVE------NFDKLEDKDIEGST-ALIWAVKNNRLGIAEKLLSKGSNVNT------- 96 (192)
T ss_dssp CCTTCCCHHHHHHHHTCGGGHHHHHH------HHCCTTCCCTTSCC-HHHHHHHTTCHHHHHHHHHHTCCTTC-------
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHH------hccccccccccCcc-HHHHHHHcCCHHHHHHHHHCCCCCCC-------
Confidence 34456689999999999999999987 44567788899999 99999999999999999999988777
Q ss_pred HHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 106 GMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 106 ~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
++..|+||||+|+..|+.+++++|++.|++++ ..|..|.||||+|+. .|+.+++++|+++|++++.
T Consensus 97 -----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~ga~~~~ 162 (192)
T 2rfm_A 97 -----KDFSGKTPLMWSIIFGYSEMSYFLLEHGANVN-DRNLEGETPLIVASK-YGRSEIVKKLLELGADISA 162 (192)
T ss_dssp -----CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS-CCCTTCCCHHHHHHH-HTCHHHHHHHHHTTCCTTC
T ss_pred -----CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHH-cCCHHHHHHHHHCCCCCCC
Confidence 88899999999999999999999999999976 788999999999999 9999999999999988764
No 14
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=1.7e-27 Score=159.30 Aligned_cols=126 Identities=22% Similarity=0.280 Sum_probs=99.7
Q ss_pred CHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHh
Q 042183 31 DPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRM 110 (179)
Q Consensus 31 ~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~ 110 (179)
.++|+.|+..|+.+.++.|++ .+..++ .+..|.| |||+|+..|+.+++++|+++|.+++.
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~------~g~~~~-~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~------------ 62 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMA------NGAPFT-TDWLGTS-PLHLAAQYGHFSTTEVLLRAGVSRDA------------ 62 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHH------HTCCCC-CCTTCCC-HHHHHHHHTCHHHHHHHHTTTCCTTC------------
T ss_pred cHHHHHHHHcCCHHHHHHHHH------cCCCCC-cCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCCC------------
Confidence 467888888888888888876 222333 5777888 88888888888888888888877766
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 111 MNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 111 ~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
++..|+||||+|+..|+.+++++|++.|++++ ..|..|.||||+|+. .|+.+++++|+++|++++.
T Consensus 63 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~ga~~~~ 128 (153)
T 1awc_B 63 RTKVDRTPLHMAASEGHANIVEVLLKHGADVN-AKDMLKMTALHWATE-HNHQEVVELLIKYGADVHT 128 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT-CCCTTSCCHHHHHHH-TTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCCHHHHHHHcChHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHH-cCCHHHHHHHHHcCCCccc
Confidence 77788888888888888888888888888865 778888888888888 8888888888888877653
No 15
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=2.2e-27 Score=159.95 Aligned_cols=128 Identities=17% Similarity=0.057 Sum_probs=113.2
Q ss_pred cccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhH
Q 042183 27 QLQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESG 106 (179)
Q Consensus 27 ~~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~ 106 (179)
.....++||.|+. |+.++++.|++ .+..++.++..|.| |||+|+..|+.+++++|+++|.+++.
T Consensus 35 ~~~g~t~L~~A~~-~~~~~v~~Ll~------~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~-------- 98 (162)
T 1ihb_A 35 NGFGRTALQVMKL-GNPEIARRLLL------RGANPDLKDRTGFA-VIHDAARAGFLDTLQTLLEFQADVNI-------- 98 (162)
T ss_dssp CTTSCCHHHHCCS-SCHHHHHHHHH------TTCCTTCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCTTC--------
T ss_pred CccCccHHHHHHc-CcHHHHHHHHH------cCCCCCCCCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCCC--------
Confidence 3445688999988 99999999887 56777888999999 99999999999999999999988777
Q ss_pred HHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCC
Q 042183 107 MIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTS 175 (179)
Q Consensus 107 ~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~ 175 (179)
++..|+||||+|+..|+.+++++|++.|++..+..+..|.|||++|+. .|+.+++++|+++|+|
T Consensus 99 ----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~-~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 99 ----EDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARL-YGRNEVVSLMQANGAG 162 (162)
T ss_dssp ----CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHTC--
T ss_pred ----cCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHH-cCCHHHHHHHHHhCCC
Confidence 899999999999999999999999999998534889999999999999 9999999999999985
No 16
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=3.1e-26 Score=155.63 Aligned_cols=125 Identities=24% Similarity=0.305 Sum_probs=116.4
Q ss_pred ccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHH
Q 042183 28 LQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGM 107 (179)
Q Consensus 28 ~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~ 107 (179)
....++||.|+..|+.++++.|++ .+..++..|..|.| |||+|+..|+.+++++|+++|++.+.
T Consensus 45 ~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~~~--------- 108 (169)
T 2y1l_E 45 ASGWTPLHLAAFNGHLEIVEVLLK------NGADVNAVDHAGMT-PLRLAALFGHLEIVEVLLKNGADVNA--------- 108 (169)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTTC---------
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHH------cCCCCCccCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCCC---------
Confidence 445689999999999999999988 66778889999999 99999999999999999999998877
Q ss_pred HHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcC
Q 042183 108 IRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNC 173 (179)
Q Consensus 108 ~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g 173 (179)
++..|.||||+|+..|+.+++++|++.|+++. ..|..|.|||++|+. .|+.+++++|++.|
T Consensus 109 ---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~-~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 109 ---NDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN-AQDKFGKTAFDISID-NGNEDLAEILQKLN 169 (169)
T ss_dssp ---CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHH-TTCHHHHHHHHTC-
T ss_pred ---CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHH-hCCHHHHHHHHHcC
Confidence 89999999999999999999999999999976 889999999999999 99999999999876
No 17
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=6.2e-27 Score=159.32 Aligned_cols=127 Identities=24% Similarity=0.320 Sum_probs=118.4
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhc
Q 042183 32 PNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMM 111 (179)
Q Consensus 32 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~ 111 (179)
++||.|+..|+.+.++.|++ ..+..++..+..|.| |||+|+..|+.+++++|+++|++++. +
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~-----~~~~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~------------~ 65 (172)
T 3v30_A 4 LSIHQLAAQGELDQLKEHLR-----KGDNLVNKPDERGFT-PLIWASAFGEIETVRFLLEWGADPHI------------L 65 (172)
T ss_dssp CCHHHHHHTTCHHHHHHHHT-----TCSGGGGCCCTTSCC-HHHHHHHTTCHHHHHHHHHHTCCTTC------------C
T ss_pred hhHHHHHHcCCHHHHHHHHH-----cCcccccCCCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCchh------------h
Confidence 57999999999999999876 455558889999999 99999999999999999999998877 8
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 112 NKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 112 ~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
+..|.||||+|+..|+.+++++|++.|++++ ..|..|.||||+|+. .|+.+++++|+++|++++.
T Consensus 66 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~ga~~~~ 130 (172)
T 3v30_A 66 AKERESALSLASTGGYTDIVGLLLERDVDIN-IYDWNGGTPLLYAVR-GNHVKCVEALLARGADLTT 130 (172)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT-CCCTTSCCHHHHHHH-TTCHHHHHHHHHTTCCTTC
T ss_pred cccCCCHHHHHHHCCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHH-cCCHHHHHHHHHcCCCccc
Confidence 9999999999999999999999999999986 889999999999999 9999999999999998864
No 18
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=5.7e-27 Score=157.86 Aligned_cols=124 Identities=23% Similarity=0.264 Sum_probs=116.7
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHH
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIR 109 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~ 109 (179)
..++|+.|+..|+.+.++.|++ .+..++..+..|.| |||+|+. |+.+++++|+++|.+++.
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~------~~~~~~~~~~~g~t-~L~~A~~-~~~~~v~~Ll~~g~~~~~----------- 65 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQ------NNVNVNAQNGFGRT-ALQVMKL-GNPEIARRLLLRGANPDL----------- 65 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTT------SCCCTTCCCTTSCC-HHHHCCS-SCHHHHHHHHHTTCCTTC-----------
T ss_pred HhhHHHHHHHcCCHHHHHHHHh------CCCCccccCccCcc-HHHHHHc-CcHHHHHHHHHcCCCCCC-----------
Confidence 4588999999999999999987 66778889999999 9999999 999999999999998877
Q ss_pred hccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCC
Q 042183 110 MMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTS 175 (179)
Q Consensus 110 ~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~ 175 (179)
++..|+||||+|+..|+.+++++|++.|++++ ..|..|.||||+|+. .|+.+++++|+++|++
T Consensus 66 -~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~ 128 (162)
T 1ihb_A 66 -KDRTGFAVIHDAARAGFLDTLQTLLEFQADVN-IEDNEGNLPLHLAAK-EGHLRVVEFLVKHTAS 128 (162)
T ss_dssp -CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHH-TTCHHHHHHHHHHSCC
T ss_pred -CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHH-cCCHHHHHHHHHccCC
Confidence 89999999999999999999999999999976 889999999999999 9999999999999986
No 19
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.95 E-value=3.1e-26 Score=162.67 Aligned_cols=134 Identities=22% Similarity=0.296 Sum_probs=113.0
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHH
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIR 109 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~ 109 (179)
..+|||.|+..|+.+.++.|++ ..+..++.+|..|.| |||+|+..|+.+++++|++++++... ...+
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~-----~~g~~~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~~~~~~~-------~~~~ 69 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLK-----FEGCEVHQRGAMGET-ALHIAALYDNLEAAMVLMEAAPELVF-------EPMT 69 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHT-----TTCSCTTCCCTTSCC-HHHHHHHTTCHHHHHHHHHHCGGGGG-------CCCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHH-----hcCCCcccCCCCCCC-HHHHHHHcCCHHHHHHHHHcCchhcc-------cccc
Confidence 4578999999999999998876 347788889999999 99999999999999999999876511 0011
Q ss_pred hccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC-------------CCCCHHHHHHHhcCCHHHHHHHHhcCCCC
Q 042183 110 MMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANN-------------YNKTPLCMVAEYEHSSHMVVAILKNCTSV 176 (179)
Q Consensus 110 ~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~-------------~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~ 176 (179)
.++..|+||||+|+..|+.+++++|++.|+++. ..+. .|.||||+|+. .|+.+++++|+++|+++
T Consensus 70 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~~~~~~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~ga~~ 147 (232)
T 2rfa_A 70 SELYEGQTALHIAVINQNVNLVRALLARGASVS-ARATGSVFHYRPHNLIYYGEHPLSFAAC-VGSEEIVRLLIEHGADI 147 (232)
T ss_dssp STTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCCSGGGSCCTTCSCCCCSSHHHHHHH-HTCHHHHHHHHHTTCCT
T ss_pred ccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCC-cccCCcceeecccccccCCCCHHHHHHH-cCCHHHHHHHHHCCCCC
Confidence 267789999999999999999999999998875 4544 69999999999 99999999999999887
Q ss_pred CC
Q 042183 177 SH 178 (179)
Q Consensus 177 ~~ 178 (179)
+.
T Consensus 148 ~~ 149 (232)
T 2rfa_A 148 RA 149 (232)
T ss_dssp TC
T ss_pred CC
Confidence 64
No 20
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=9.8e-27 Score=159.41 Aligned_cols=131 Identities=19% Similarity=0.152 Sum_probs=122.2
Q ss_pred cccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhH
Q 042183 27 QLQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESG 106 (179)
Q Consensus 27 ~~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~ 106 (179)
.....++||.|+..|+.++++.|++ .+..++..+..|.| |||+|+..|+.+++++|+++|++++.
T Consensus 36 ~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~-------- 100 (179)
T 3f6q_A 36 DDHGFSPLHWACREGRSAVVEMLIM------RGARINVMNRGDDT-PLHLAASHGHRDIVQKLLQYKADINA-------- 100 (179)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTCCC-HHHHHHHTTCHHHHHHHHHTTCCTTC--------
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHH------cCCCCCCcCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCCc--------
Confidence 3445689999999999999999998 67788889999999 99999999999999999999998887
Q ss_pred HHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 107 MIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 107 ~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
++..|.||||+|+..|+.+++++|++.|+++. ..|..|.|||++|+. .++.+++++|+++|++++.
T Consensus 101 ----~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~tpl~~A~~-~~~~~~~~~L~~~g~~~~~ 166 (179)
T 3f6q_A 101 ----VNEHGNVPLHYACFWGQDQVAEDLVANGALVS-ICNKYGEMPVDKAKA-PLRELLRERAEKMGQNLNR 166 (179)
T ss_dssp ----CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSS-BCCTTSCCGGGGSCH-HHHHHHHHHHHHTTCCCSC
T ss_pred ----cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcc-hhccCCCCcHHHHHH-HHHHHHHHHHHHhhcCccc
Confidence 99999999999999999999999999999976 899999999999999 9999999999999998764
No 21
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=3e-27 Score=168.27 Aligned_cols=128 Identities=18% Similarity=0.065 Sum_probs=117.9
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHH
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIR 109 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~ 109 (179)
..++||.|+..|+.++++.|++ .+..++..|..|.| |||+|+..|+.+++++|+++|++++.
T Consensus 21 ~~t~L~~A~~~g~~~~v~~Ll~------~g~~~~~~d~~g~t-pLh~A~~~g~~~~v~~Ll~~ga~~n~----------- 82 (229)
T 2vge_A 21 PLVLLLDAALTGELEVVQQAVK------EMNDPSQPNEEGIT-ALHNAICGANYSIVDFLITAGANVNS----------- 82 (229)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHH------HSSCTTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTTC-----------
T ss_pred hhHHHHHHHHcCCHHHHHHHHh------cCCCCCCCCCCCCC-HHHHHHHcCCHHHHHHHHHCCCCCCC-----------
Confidence 4478999999999999999987 45677889999999 99999999999999999999998887
Q ss_pred hccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCC-CCCCCHHHHH--HHhcCCHHHHHHHHhcCCCCCC
Q 042183 110 MMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSAN-NYNKTPLCMV--AEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 110 ~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~-~~g~tpl~~A--~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
+|..|+||||+|+..|+.+++++|++.|++++ ..+ ..|.|||++| +. .|+.+++++|+++|++++.
T Consensus 83 -~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~g~tpL~~A~a~~-~~~~~~v~~Ll~~ga~~~~ 151 (229)
T 2vge_A 83 -PDSHGWTPLHCAASCNDTVICMALVQHGAAIF-ATTLSDGATAFEKCDPYR-EGYADCATYLADVEQSMGL 151 (229)
T ss_dssp -CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT-CCCSSTTCCTGGGCCTTS-TTHHHHHHHHHHHHHHTTT
T ss_pred -CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-cccCCCCCCHHHHHHHHh-cChHHHHHHHHHcCCCccc
Confidence 99999999999999999999999999999987 554 6999999999 89 9999999999999987754
No 22
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.94 E-value=1.3e-25 Score=158.42 Aligned_cols=140 Identities=19% Similarity=0.167 Sum_probs=86.0
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhc-ccCCchhh------
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAK-LLQHEDEE------ 102 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~-~~~~~~~~------ 102 (179)
..++||.|+..|+.++++.|++ .+..++..+..|.| |||+|+..|+.+++++|++.+. ..+.....
T Consensus 25 g~t~L~~A~~~g~~~~v~~Ll~------~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~ 97 (223)
T 2f8y_A 25 GETALHLAARYSRSDAAKRLLE------ASADANIQDNMGRT-PLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLI 97 (223)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCC-HHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHH
T ss_pred CCchHHHHHHcCCHHHHHHHHH------cCCCCCCcCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHH
Confidence 4466666666666666666665 33444445555555 5555555555555555555443 22211000
Q ss_pred ---------------hhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHH
Q 042183 103 ---------------LESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVV 167 (179)
Q Consensus 103 ---------------~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ 167 (179)
..+..++.++..|+||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+. .|+.++++
T Consensus 98 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~-~~~~~~v~ 175 (223)
T 2f8y_A 98 LAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKD-MQNNREETPLFLAAR-EGSYETAK 175 (223)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHH-HTCHHHHH
T ss_pred HHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCcCHHHHHHH-cCCHHHHH
Confidence 1111223366677777777777777777777777777765 677777777777777 77777777
Q ss_pred HHHhcCCCCCC
Q 042183 168 AILKNCTSVSH 178 (179)
Q Consensus 168 ~Ll~~g~~~~~ 178 (179)
+|+++|++++.
T Consensus 176 ~Ll~~ga~~~~ 186 (223)
T 2f8y_A 176 VLLDHFANRDI 186 (223)
T ss_dssp HHHHTTCCTTC
T ss_pred HHHHcCCCCcc
Confidence 77777776653
No 23
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.94 E-value=1.1e-25 Score=159.69 Aligned_cols=142 Identities=18% Similarity=0.158 Sum_probs=102.7
Q ss_pred ccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhh-----
Q 042183 28 LQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEE----- 102 (179)
Q Consensus 28 ~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~----- 102 (179)
....++||.|+..|+.++++.|++ .+..++..|..|.| |||+|+..|+.+++++|++++.+.+.....
T Consensus 38 ~~g~t~L~~A~~~g~~~~v~~Ll~------~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 110 (231)
T 3aji_A 38 QDSRTALHWACSAGHTEIVEFLLQ------LGVPVNDKDDAGWS-PLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPL 110 (231)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHH------TTCCSCCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHH------hCCCCCCcCCCCCC-HHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 334567777777777777777776 45556666667777 777777777777777777776665442111
Q ss_pred ----------------hhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHH
Q 042183 103 ----------------LESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMV 166 (179)
Q Consensus 103 ----------------~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~ 166 (179)
..+..++.++..|.||||+|+..|+.+++++|++.|++++ .+|..|.||||+|+. .|+.+++
T Consensus 111 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~-~~~~~~v 188 (231)
T 3aji_A 111 HYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTN-IQDTEGNTPLHLACD-EERVEEA 188 (231)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHH-TTCHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcc-ccCCCCCCHHHHHHH-CCCHHHH
Confidence 1111223467778888888888888888888888888876 778888899999988 8888999
Q ss_pred HHHHhcCCCCCC
Q 042183 167 VAILKNCTSVSH 178 (179)
Q Consensus 167 ~~Ll~~g~~~~~ 178 (179)
++|+++|++++.
T Consensus 189 ~~Ll~~ga~~~~ 200 (231)
T 3aji_A 189 KFLVTQGASIYI 200 (231)
T ss_dssp HHHHHTTCCSCC
T ss_pred HHHHHCCCCCCC
Confidence 999888888754
No 24
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.94 E-value=3.1e-26 Score=163.26 Aligned_cols=136 Identities=19% Similarity=0.218 Sum_probs=95.0
Q ss_pred ccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHH
Q 042183 28 LQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGM 107 (179)
Q Consensus 28 ~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~ 107 (179)
....+|||.|+..|+.++++.|++ .+..++.++..|.| |||+|+..|+.+++++|++.+..+.. ...
T Consensus 43 ~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~~~~~~~------~~~ 109 (236)
T 1ikn_D 43 NLQQTPLHLAVITNQPEIAEALLG------AGCDPELRDFRGNT-PLHLACEQGCLASVGVLTQSCTTPHL------HSI 109 (236)
T ss_dssp TTCCCHHHHHHHTTCHHHHHCCCS------CCCCSCCCCTTCCC-HHHHHHHHTCHHHHHHHHHSTTTTSS------SCG
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHH------cCCCCCCcCCCCCC-HHHHHHHcCCHHHHHHHHhcccchhH------HHH
Confidence 345577888888888888877765 55666777777778 88888888888888888877654321 011
Q ss_pred HHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC-CCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 108 IRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANN-YNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 108 ~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~-~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
++..+..|+||||+|+..|+.+++++|++.|++++ ..+. .|.||||+|+. .|+.+++++|+++|++++.
T Consensus 110 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~~g~tpL~~A~~-~~~~~~v~~Ll~~ga~~~~ 179 (236)
T 1ikn_D 110 LKATNYNGHTCLHLASIHGYLGIVELLVSLGADVN-AQEPCNGRTALHLAVD-LQNPDLVSLLLKCGADVNR 179 (236)
T ss_dssp GGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTT-CCCTTTCCCHHHHHHH-TTCHHHHHHHHTTTCCSCC
T ss_pred hhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCCHHHHHHH-cCCHHHHHHHHHcCCCCCc
Confidence 23356667777777777777777777777777765 5555 67777777777 7777777777777776653
No 25
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=4.7e-26 Score=152.27 Aligned_cols=122 Identities=22% Similarity=0.228 Sum_probs=113.6
Q ss_pred cccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhH
Q 042183 27 QLQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESG 106 (179)
Q Consensus 27 ~~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~ 106 (179)
.....++||.|+..|+.++++.|++ .+..++..+..|.| |||+|+..|+.+++++|+++|++++.
T Consensus 31 ~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~-------- 95 (153)
T 1awc_B 31 DWLGTSPLHLAAQYGHFSTTEVLLR------AGVSRDARTKVDRT-PLHMAASEGHANIVEVLLKHGADVNA-------- 95 (153)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHT------TTCCTTCCCTTCCC-HHHHHHHHTCHHHHHHHHTTTCCTTC--------
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHH------cCCCCCCCCCCCCC-HHHHHHHcChHHHHHHHHHcCCCCCC--------
Confidence 3445689999999999999999987 66678889999999 99999999999999999999998877
Q ss_pred HHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHH
Q 042183 107 MIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAI 169 (179)
Q Consensus 107 ~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~L 169 (179)
++..|+||||+|+..|+.+++++|++.|++++ ..|..|.|||++|+. .|+.+++++|
T Consensus 96 ----~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~-~~~~~i~~~L 152 (153)
T 1awc_B 96 ----KDMLKMTALHWATEHNHQEVVELLIKYGADVH-TQSKFCKTAFDISID-NGNEDLAEIL 152 (153)
T ss_dssp ----CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHH-TTCHHHHHHH
T ss_pred ----CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHH-cCCHHHHHHh
Confidence 89999999999999999999999999999986 899999999999999 9999999987
No 26
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.94 E-value=8.4e-26 Score=152.98 Aligned_cols=128 Identities=18% Similarity=0.102 Sum_probs=118.5
Q ss_pred cccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhH
Q 042183 27 QLQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESG 106 (179)
Q Consensus 27 ~~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~ 106 (179)
.....++||.|+..|+.++++.|++ .+..++..+..|.| |||+|+..|+.+++++|++++++++.
T Consensus 33 ~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~-------- 97 (167)
T 3v31_A 33 DEEGFTPLMWAAAHGQIAVVEFLLQ------NGADPQLLGKGRES-ALSLACSKGYTDIVKMLLDCGVDVNE-------- 97 (167)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTCCC-HHHHHHHHTCHHHHHHHHHHTCCTTC--------
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHH------cCCCCCCcCCCCCc-HHHHHHHcCCHHHHHHHHHCCCCCCc--------
Confidence 3445689999999999999999988 56778889999999 99999999999999999999998877
Q ss_pred HHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCC
Q 042183 107 MIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTS 175 (179)
Q Consensus 107 ~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~ 175 (179)
++..|.||||+|+..|+.+++++|++.|+++. ..+..|.||+++|+. .|+.+++++|++++++
T Consensus 98 ----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~-~~~~~~~~~L~~~~~~ 160 (167)
T 3v31_A 98 ----YDWNGGTPLLYAVHGNHVKCVKMLLESGADPT-IETDSGYNSMDLAVA-LGYRSVQQVIESHLLK 160 (167)
T ss_dssp ----CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred ----CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHH-cCcHHHHHHHHHHHHH
Confidence 89999999999999999999999999999976 899999999999999 9999999999998754
No 27
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.94 E-value=4.4e-26 Score=157.72 Aligned_cols=125 Identities=16% Similarity=0.084 Sum_probs=116.9
Q ss_pred ccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHH
Q 042183 28 LQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGM 107 (179)
Q Consensus 28 ~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~ 107 (179)
....+|||.|+..|+.++++.|++ .+..++..|..|.| |||+|+..|+.+++++|+++|++++.
T Consensus 66 ~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~--------- 129 (192)
T 2rfm_A 66 IEGSTALIWAVKNNRLGIAEKLLS------KGSNVNTKDFSGKT-PLMWSIIFGYSEMSYFLLEHGANVND--------- 129 (192)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHH------HTCCTTCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCSSC---------
T ss_pred ccCccHHHHHHHcCCHHHHHHHHH------CCCCCCCCCCCCCc-HHHHHHHcCCHHHHHHHHHCCCCCCC---------
Confidence 446689999999999999999988 45677889999999 99999999999999999999998887
Q ss_pred HHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcC
Q 042183 108 IRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNC 173 (179)
Q Consensus 108 ~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g 173 (179)
++..|.||||+|+..|+.+++++|++.|+++. ..|..|.||+++|+. .|+.+++++|+++|
T Consensus 130 ---~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~-~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 130 ---RNLEGETPLIVASKYGRSEIVKKLLELGADIS-ARDLTGLTAEASARI-FGRQEVIKIFTEVR 190 (192)
T ss_dssp ---CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CBCTTSCBHHHHHHH-TTCHHHHHHHHHHH
T ss_pred ---CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHH-hCcHHHHHHHHhcc
Confidence 99999999999999999999999999999976 899999999999999 99999999999876
No 28
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.94 E-value=5.9e-26 Score=163.55 Aligned_cols=142 Identities=18% Similarity=0.160 Sum_probs=110.9
Q ss_pred ccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhc-ccCCchhh----
Q 042183 28 LQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAK-LLQHEDEE---- 102 (179)
Q Consensus 28 ~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~-~~~~~~~~---- 102 (179)
....++||.|+..|+.++++.|++ .+..++..+..|.| |||+|+..|+.+++++|++++. ..+.....
T Consensus 55 ~~g~t~L~~A~~~g~~~~v~~Ll~------~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~ 127 (253)
T 1yyh_A 55 RTGETALHLAARYSRSDAAKRLLE------ASADANIQDNMGRT-PLHAAVSADAQGVFQILIRNRATDLDARMHDGTTP 127 (253)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCC-HHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHH------cCCCCCCCCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcH
Confidence 445688999999999999988887 55666777777777 8888888788888888777765 33321111
Q ss_pred -----------------hhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHH
Q 042183 103 -----------------LESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHM 165 (179)
Q Consensus 103 -----------------~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~ 165 (179)
..+..++.++..|+||||+|+..|+.+++++|++.|++++ ..|..|.||||+|+. .|+.++
T Consensus 128 L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~tpL~~A~~-~~~~~~ 205 (253)
T 1yyh_A 128 LILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKD-MQNNREETPLFLAAR-EGSYET 205 (253)
T ss_dssp HHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHH-HTCHHH
T ss_pred HHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHH-CCCHHH
Confidence 1122345578889999999999999999999999999976 788899999999999 999999
Q ss_pred HHHHHhcCCCCCC
Q 042183 166 VVAILKNCTSVSH 178 (179)
Q Consensus 166 ~~~Ll~~g~~~~~ 178 (179)
+++|+++|++++.
T Consensus 206 v~~Ll~~ga~~~~ 218 (253)
T 1yyh_A 206 AKVLLDHFANRDI 218 (253)
T ss_dssp HHHHHHTTCCTTC
T ss_pred HHHHHHcCCCccc
Confidence 9999999988764
No 29
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=6.3e-26 Score=151.92 Aligned_cols=120 Identities=19% Similarity=0.149 Sum_probs=65.1
Q ss_pred cCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHH
Q 042183 29 QIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMI 108 (179)
Q Consensus 29 ~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~ 108 (179)
...++||. +..|+.++++.|++ .+..++.+|..|.| |||+|+..|+.+++++|+++|++++.
T Consensus 35 ~g~t~L~~-~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~---------- 96 (156)
T 1bd8_A 35 FGKTALQV-MMFGSTAIALELLK------QGASPNVQDTSGTS-PVHDAARTGFLDTLKVLVEHGADVNV---------- 96 (156)
T ss_dssp TSCCHHHH-SCTTCHHHHHHHHH------TTCCTTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCSCC----------
T ss_pred CCCcHHHH-HHcCCHHHHHHHHH------CCCCCCCcCCCCCC-HHHHHHHcCcHHHHHHHHHcCCCCCC----------
Confidence 34455555 55555555555554 34444555555555 55555555555555555555555444
Q ss_pred HhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHh
Q 042183 109 RMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILK 171 (179)
Q Consensus 109 ~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~ 171 (179)
++..|+||||+|+..|+.+++++|++. +++. ..|..|.|||++|+. .|+.+++++|++
T Consensus 97 --~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~-~~~~~g~t~l~~A~~-~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 97 --PDGTGALPIHLAVQEGHTAVVSFLAAE-SDLH-RRDARGLTPLELALQ-RGAQDLVDILQG 154 (156)
T ss_dssp --CCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTT-CCCTTSCCHHHHHHH-SCCHHHHHHHHT
T ss_pred --cCCCCCcHHHHHHHhChHHHHHHHHhc-cCCC-CcCCCCCCHHHHHHH-cCcHHHHHHHHh
Confidence 555555555555555555555555555 4443 455555555555555 555555555554
No 30
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.94 E-value=9.4e-26 Score=159.63 Aligned_cols=128 Identities=20% Similarity=0.184 Sum_probs=94.3
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCc--ccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHH
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICP--SLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGM 107 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~--~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~ 107 (179)
..+|||.|+..|+.++++.|++ .+ ..++..+..|.| |||+|+..|+.+++++|+++|.+++.
T Consensus 72 g~t~L~~A~~~~~~~~~~~Ll~------~g~~~~~~~~~~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~~~--------- 135 (228)
T 2dzn_A 72 GWTPFHIACSVGNLEVVKSLYD------RPLKPDLNKITNQGVT-CLHLAVGKKWFEVSQFLIENGASVRI--------- 135 (228)
T ss_dssp SCCHHHHHHHHCCHHHHHHHHS------SSSCCCTTCCCTTCCC-HHHHHHHTTCHHHHHHHHHTTCCSCC---------
T ss_pred CCCHHHHHHHcCCHHHHHHHHh------CCCCcccccCCcCCCC-HHHHHHHcCCHhHHHHHHHcCCCccc---------
Confidence 3455666666666665555554 22 445556666666 66666666666666666666665555
Q ss_pred HHhccCCCCcHHHHHHHcCCHHHHHHHHhcC-CCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHH-hcCCCCCC
Q 042183 108 IRMMNKEKHTALHEAVFHKIVDVVKILTRED-LDYPYSANNYNKTPLCMVAEYEHSSHMVVAIL-KNCTSVSH 178 (179)
Q Consensus 108 ~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~-~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll-~~g~~~~~ 178 (179)
++..|+||||+|+..|+.+++++|++.| ++++ ..|..|.||||+|+. .|+.+++++|+ +.|++++.
T Consensus 136 ---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~d~~g~t~L~~A~~-~~~~~~v~~Ll~~~ga~~~~ 203 (228)
T 2dzn_A 136 ---KDKFNQIPLHRAASVGSLKLIELLCGLGKSAVN-WQDKQGWTPLFHALA-EGHGDAAVLLVEKYGAEYDL 203 (228)
T ss_dssp ---CCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSC-CCCTTSCCHHHHHHH-TTCHHHHHHHHHHHCCCSCC
T ss_pred ---cCCCCCCHHHHHHHcCCHHHHHHHHhcCccccc-CcCCCCCCHHHHHHH-cCCHHHHHHHHHhcCCCCCc
Confidence 7888999999999999999999999888 7765 788889999999999 99999999999 78888764
No 31
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.94 E-value=8.9e-26 Score=164.28 Aligned_cols=102 Identities=20% Similarity=0.176 Sum_probs=83.6
Q ss_pred ccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccC-CCCcHHHHHHHcCCHHHHHHHHhcCCC
Q 042183 62 LLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNK-EKHTALHEAVFHKIVDVVKILTREDLD 140 (179)
Q Consensus 62 ~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~-~g~t~l~~A~~~g~~~~~~~Ll~~~~~ 140 (179)
++..+..|.| |||+|+..|+.+++++|+++|++++. ++. .|+||||+|+..|+.+++++|++.|++
T Consensus 151 ~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~g~~~~~------------~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad 217 (282)
T 1oy3_D 151 LEAENYDGHT-PLHVAVIHKDAEMVRLLRDAGADLNK------------PEPTCGRTPLHLAVEAQAASVLELLLKAGAD 217 (282)
T ss_dssp TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHHTCCTTC------------CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCcCCCCcC-HHHHHHHcCCHHHHHHHHHcCCCCCC------------CCCCCCcCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 4455666777 77777777777777777777766655 664 499999999999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 141 YPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 141 ~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
++ .+|..|.||||+|+. .|+.+++++|+++|++++.
T Consensus 218 ~~-~~d~~g~tpL~~A~~-~~~~~~v~~Ll~~ga~~~~ 253 (282)
T 1oy3_D 218 PT-ARMYGGRTPLGSALL-RPNPILARLLRAHGAPEPE 253 (282)
T ss_dssp TT-CCCTTSCCHHHHHHT-SSCHHHHHHHHHTTCCCCC
T ss_pred Cc-ccccCCCCHHHHHHH-cCCcHHHHHHHHcCCCcCc
Confidence 76 889999999999999 9999999999999998864
No 32
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.94 E-value=1.4e-25 Score=163.28 Aligned_cols=146 Identities=22% Similarity=0.239 Sum_probs=112.8
Q ss_pred ccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhh-----
Q 042183 28 LQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEE----- 102 (179)
Q Consensus 28 ~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~----- 102 (179)
....+|||.|+..|+.++++.|++ ....+..++..+..|.| |||+|+..|+.+++++|+++|++++.....
T Consensus 7 ~~g~t~L~~A~~~g~~~~v~~Ll~---~g~~~~~~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL 82 (282)
T 1oy3_D 7 EDGDTALHLAVIHQHEPFLDFLLG---FSAGHEYLDLQNDLGQT-ALHLAAILGEASTVEKLYAAGAGVLVAERGGHTAL 82 (282)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHH---HHTTSGGGGCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHh---cCCCcccccccCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 345577888888888888888876 22233346777788888 888888888888888888888776653221
Q ss_pred --------------hh-------------------------------------------------hHHHHhccCCCCcHH
Q 042183 103 --------------LE-------------------------------------------------SGMIRMMNKEKHTAL 119 (179)
Q Consensus 103 --------------~~-------------------------------------------------~~~~~~~~~~g~t~l 119 (179)
+. ...++.++..|.|||
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L 162 (282)
T 1oy3_D 83 HLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPL 162 (282)
T ss_dssp HHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHH
T ss_pred HHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHH
Confidence 00 112455677899999
Q ss_pred HHHHHcCCHHHHHHHHhcCCCCCCCCC-CCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCCC
Q 042183 120 HEAVFHKIVDVVKILTREDLDYPYSAN-NYNKTPLCMVAEYEHSSHMVVAILKNCTSVSHR 179 (179)
Q Consensus 120 ~~A~~~g~~~~~~~Ll~~~~~~~~~~~-~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~r 179 (179)
|+|+..|+.+++++|++.|++++ ..+ ..|.||||+|+. .|+.+++++|+++|++++.+
T Consensus 163 ~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~~g~tpL~~A~~-~~~~~~v~~Ll~~gad~~~~ 221 (282)
T 1oy3_D 163 HVAVIHKDAEMVRLLRDAGADLN-KPEPTCGRTPLHLAVE-AQAASVLELLLKAGADPTAR 221 (282)
T ss_dssp HHHHHTTCHHHHHHHHHHTCCTT-CCCTTTCCCHHHHHHH-TTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCcCHHHHHHH-cCCHHHHHHHHHcCCCCccc
Confidence 99999999999999999999987 555 459999999999 99999999999999988753
No 33
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.94 E-value=2.3e-25 Score=158.01 Aligned_cols=128 Identities=20% Similarity=0.247 Sum_probs=92.7
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHH
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIR 109 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~ 109 (179)
.+++||.|+..|+.+.++.++. ..+..++..+..|.| |||+|+..|+.+++++|++++.+++.
T Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~-----~~~~~~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~g~~~~~----------- 68 (231)
T 3aji_A 6 SNIMICNLAYSGKLDELKERIL-----ADKSLATRTDQDSRT-ALHWACSAGHTEIVEFLLQLGVPVND----------- 68 (231)
T ss_dssp SSSHHHHHHHHTCHHHHHHHHH-----HCGGGGGCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCSCC-----------
T ss_pred ccchHHHHHHhCCHHHHHHHHH-----hchhhhhcCCCCCCC-HHHHHHHcCcHHHHHHHHHhCCCCCC-----------
Confidence 4578999999999999999876 456667888999999 99999999999999999999988877
Q ss_pred hccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCC
Q 042183 110 MMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVS 177 (179)
Q Consensus 110 ~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~ 177 (179)
++..|+||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+. .|+.+++++|+++|++++
T Consensus 69 -~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~-~~~~~~~~~Ll~~g~~~~ 133 (231)
T 3aji_A 69 -KDDAGWSPLHIAASAGXDEIVKALLVKGAHVN-AVNQNGCTPLHYAAS-KNRHEIAVMLLEGGANPD 133 (231)
T ss_dssp -CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHH-TTCHHHHHHHHHTTCCTT
T ss_pred -cCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHH-cCCHHHHHHHHHcCCCCC
Confidence 55555555555555555555555555555543 455555555555555 555555555555555443
No 34
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=8.4e-26 Score=152.71 Aligned_cols=123 Identities=19% Similarity=0.242 Sum_probs=113.2
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHH
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIR 109 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~ 109 (179)
..++||.|+..|+.++++.|++ .+..++.+|..|.| |||+|+..|+.+++++|+++|++++.
T Consensus 42 g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~----------- 103 (165)
T 3twr_A 42 QSTPLHFAAGYNRVSVVEYLLQ------HGADVHAKDKGGLV-PLHNACSYGHYEVAELLVKHGAVVNV----------- 103 (165)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTTC-----------
T ss_pred CCCHHHHHHHcChHHHHHHHHh------cCCCCCccCCCCCC-HHHHHHHcCcHHHHHHHHhCCCCCCC-----------
Confidence 4589999999999999999998 67788899999999 99999999999999999999998877
Q ss_pred hccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCC
Q 042183 110 MMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCT 174 (179)
Q Consensus 110 ~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~ 174 (179)
++..|+||||+|+..|+.+++++|++.|++++ .+|..|.||+++|+. ++.+++++|+++|+
T Consensus 104 -~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~a~~--~~~~i~~~L~~~gA 164 (165)
T 3twr_A 104 -ADLWKFTPLHEAAAKGKYEICKLLLQHGADPT-KKNRDGNTPLDLVKD--GDTDIQDLLRGDAA 164 (165)
T ss_dssp -CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCTGGGSCT--TCHHHHHHHHTC--
T ss_pred -cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCChhHhHhc--CChHHHHHHhhccc
Confidence 89999999999999999999999999999976 899999999999655 78999999999885
No 35
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=1.6e-25 Score=149.90 Aligned_cols=126 Identities=17% Similarity=0.248 Sum_probs=115.8
Q ss_pred CHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHh
Q 042183 31 DPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRM 110 (179)
Q Consensus 31 ~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~ 110 (179)
.++|+.|+..|+.+.++.|++ ..+..++..+..|.| |||+ +..|+.+++++|+++|++++.
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~-----~~~~~~~~~~~~g~t-~L~~-~~~~~~~~v~~Ll~~g~~~~~------------ 63 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLH-----RELVHPDALNRFGKT-ALQV-MMFGSTAIALELLKQGASPNV------------ 63 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHH-----TTCCCTTCCCTTSCC-HHHH-SCTTCHHHHHHHHHTTCCTTC------------
T ss_pred chHHHHHHHhCCHHHHHHHHH-----hhCcCccccCCCCCc-HHHH-HHcCCHHHHHHHHHCCCCCCC------------
Confidence 478999999999999999987 334577889999999 9999 999999999999999998877
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 111 MNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 111 ~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
++..|.||||+|+..|+.+++++|++.|++++ ..|..|.||||+|+. .|+.+++++|+++ ++++.
T Consensus 64 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~-~~~~~ 128 (156)
T 1bd8_A 64 QDTSGTSPVHDAARTGFLDTLKVLVEHGADVN-VPDGTGALPIHLAVQ-EGHTAVVSFLAAE-SDLHR 128 (156)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHH-HTCHHHHHHHHTT-SCTTC
T ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC-CcCCCCCcHHHHHHH-hChHHHHHHHHhc-cCCCC
Confidence 89999999999999999999999999999976 889999999999999 9999999999998 77653
No 36
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.94 E-value=3e-25 Score=163.07 Aligned_cols=142 Identities=23% Similarity=0.185 Sum_probs=116.9
Q ss_pred ccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhh-----
Q 042183 28 LQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEE----- 102 (179)
Q Consensus 28 ~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~----- 102 (179)
....+|||.|+..|+.++++.|++ .+..++..|..|.| |||+|+..|+.+++++|+++|++++.....
T Consensus 71 ~~g~t~L~~A~~~g~~~~v~~Ll~------~ga~~~~~~~~g~t-pL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l 143 (299)
T 1s70_B 71 VDGLTALHQACIDDNVDMVKFLVE------NGANINQPDNEGWI-PLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPL 143 (299)
T ss_dssp TTCCBHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHH------CCCCCCCCCCCCCc-HHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHH
Confidence 345588888888888888888877 66778888899999 999999999999999999998877653221
Q ss_pred ----------hhhHH-------H--------------------------HhccCCCCcHHHHHHHcCCHHHHHHHHhcCC
Q 042183 103 ----------LESGM-------I--------------------------RMMNKEKHTALHEAVFHKIVDVVKILTREDL 139 (179)
Q Consensus 103 ----------~~~~~-------~--------------------------~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~ 139 (179)
..... + ...+..|.||||+|+..|+.+++++|++.|+
T Consensus 144 ~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 223 (299)
T 1s70_B 144 DIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARY 223 (299)
T ss_dssp HHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTC
T ss_pred HHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCC
Confidence 00000 0 0134679999999999999999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 140 DYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 140 ~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
+++ ..|..|.||||+|+. .|+.+++++|+++|++++.
T Consensus 224 d~~-~~d~~g~tpL~~A~~-~~~~~~v~~Ll~~gad~~~ 260 (299)
T 1s70_B 224 DVN-IKDYDGWTPLHAAAH-WGKEEACRILVENLCDMEA 260 (299)
T ss_dssp CTT-CCCTTCCCHHHHHHH-TTCHHHHHHHHHTTCCTTC
T ss_pred CCC-CcCCCCCcHHHHHHh-cCCHHHHHHHHHcCCCCCC
Confidence 987 899999999999999 9999999999999998864
No 37
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.94 E-value=1.6e-25 Score=161.24 Aligned_cols=134 Identities=17% Similarity=0.179 Sum_probs=89.3
Q ss_pred HHHHcCChHHHHHHHHHHHHhhCcccc-cccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhh------------
Q 042183 36 KAAAAGNLEPFKDMAREEILEICPSLL-LQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEE------------ 102 (179)
Q Consensus 36 ~A~~~g~~~~~~~ll~~~~~~~~~~~~-~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~------------ 102 (179)
.+...++.++++.|++ .+..+ +..|..|.| |||+|+..|+.+++++|+++|++++.....
T Consensus 29 ~~~~~~~~~~v~~Ll~------~g~~~~~~~d~~g~t-~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 101 (253)
T 1yyh_A 29 SEEEEDAPAVISDFIY------QGASLHNQTDRTGET-ALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSAD 101 (253)
T ss_dssp -----------------------------CCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred hhhcCCChHHHHHHHH------ccCCcccccCCCCCc-HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 4788899999999987 33333 456899999 999999999999999999999888763221
Q ss_pred ---------hhh-HHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhc
Q 042183 103 ---------LES-GMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKN 172 (179)
Q Consensus 103 ---------~~~-~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~ 172 (179)
... ..++.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+. .|+.+++++|+++
T Consensus 102 ~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~d~~g~t~L~~A~~-~~~~~~v~~Ll~~ 179 (253)
T 1yyh_A 102 AQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVN-AVDDLGKSALHWAAA-VNNVDAAVVLLKN 179 (253)
T ss_dssp CHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTT-CBCTTSCBHHHHHHH-HTCHHHHHHHHHT
T ss_pred CHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHH-cCCHHHHHHHHHc
Confidence 011 1344556678888888888888888888888888876 778888888888888 8888888888888
Q ss_pred CCCCCC
Q 042183 173 CTSVSH 178 (179)
Q Consensus 173 g~~~~~ 178 (179)
|++++.
T Consensus 180 ga~~~~ 185 (253)
T 1yyh_A 180 GANKDM 185 (253)
T ss_dssp TCCTTC
T ss_pred CCCCCC
Confidence 887754
No 38
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.94 E-value=4.4e-26 Score=165.81 Aligned_cols=130 Identities=16% Similarity=0.092 Sum_probs=116.0
Q ss_pred ccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCC--------------CCCcHHHHHHHHcCCHHHHHHHHH--
Q 042183 28 LQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNA--------------KGDSRSLLVAAKFGHCDIVSVLIE-- 91 (179)
Q Consensus 28 ~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~--------------~g~t~~L~~A~~~g~~~~v~~ll~-- 91 (179)
....+|||.|+..|+.++++.|++ .+..++..+. .|.| |||+|+..|+.+++++|++
T Consensus 99 ~~g~tpL~~A~~~g~~~~v~~Ll~------~ga~~~~~~~~~~~~~~~~~~~~~~g~t-pL~~A~~~g~~~~v~~Ll~~~ 171 (273)
T 2pnn_A 99 YKGQTALHIAIERRNMTLVTLLVE------NGADVQAAANGDFFKKTKGRPGFYFGEL-PLSLAACTNQLAIVKFLLQNS 171 (273)
T ss_dssp TTTCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCBCSGGGSSCSSSCCCCSCBS-HHHHHHHTTCHHHHHHHHHCS
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHH------CCCCcCccccccccccccccccccCCCC-HHHHHHHcCCHHHHHHHHhcc
Confidence 356799999999999999999998 5667777776 7999 9999999999999999999
Q ss_pred -hhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCC---------HHHHHHHHhcCCCCC------CCCCCCCCCHHHH
Q 042183 92 -RAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKI---------VDVVKILTREDLDYP------YSANNYNKTPLCM 155 (179)
Q Consensus 92 -~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~---------~~~~~~Ll~~~~~~~------~~~~~~g~tpl~~ 155 (179)
+|++++. +|..|+||||+|+..|+ .+++++|++.|++++ ...|..|.||||+
T Consensus 172 ~~gad~~~------------~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~ 239 (273)
T 2pnn_A 172 WQPADISA------------RDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLAL 239 (273)
T ss_dssp SCCCCTTC------------CCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHH
T ss_pred cCCCCcee------------eCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHH
Confidence 8888877 99999999999999998 799999999998875 2589999999999
Q ss_pred HHHhcCCHHHHHHHHhcCC-CCC
Q 042183 156 VAEYEHSSHMVVAILKNCT-SVS 177 (179)
Q Consensus 156 A~~~~~~~~~~~~Ll~~g~-~~~ 177 (179)
|+. .|+.+++++|+++|+ |+.
T Consensus 240 A~~-~g~~~iv~~Ll~~ga~dp~ 261 (273)
T 2pnn_A 240 AAS-SGKIGVLAYILQREIHEPE 261 (273)
T ss_dssp HHH-TTCHHHHHHHHHHHTC---
T ss_pred HHH-hChHHHHHHHHHCCCCCch
Confidence 999 999999999999997 664
No 39
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.94 E-value=2.5e-25 Score=161.01 Aligned_cols=128 Identities=21% Similarity=0.220 Sum_probs=94.9
Q ss_pred ccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHH
Q 042183 28 LQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGM 107 (179)
Q Consensus 28 ~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~ 107 (179)
....++||.|+..|+.++++.|++ .+..++..|..|.| |||+|+..|+.+++++|+++|++.+.
T Consensus 34 ~~g~t~L~~A~~~g~~~~v~~Ll~------~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~--------- 97 (261)
T 2xai_A 34 ADHVSPLHEACLGGHLSCVKILLK------HGAQVNGVTADWHT-PLFNACVSGSWDCVNLLLQHGASVQP--------- 97 (261)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHH------TTCCTTCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCSSC---------
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHH------CCCCCCCCCCCCCC-HHHHHHHcCCHHHHHHHHHCCCCCCC---------
Confidence 344567777777777777777665 45566666777777 77777777777777777777665543
Q ss_pred HHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCC
Q 042183 108 IRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVS 177 (179)
Q Consensus 108 ~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~ 177 (179)
+..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+. .|+.+++++|+++|++++
T Consensus 98 ----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~~~ 161 (261)
T 2xai_A 98 ----ESDLASPIHEAARRGHVECVNSLIAYGGNID-HKISHLGTPLYLACE-NQQRACVKKLLESGADVN 161 (261)
T ss_dssp ----SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCBTTTBCHHHHHHH-TTCHHHHHHHHHHTCCTT
T ss_pred ----CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC-cCCCCCCCHHHHHHH-hCCHHHHHHHHHcCCCCC
Confidence 3457888888888888888888888888865 678888888888888 888888888888887765
No 40
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.94 E-value=4.6e-25 Score=155.66 Aligned_cols=125 Identities=18% Similarity=0.135 Sum_probs=99.6
Q ss_pred CHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHh
Q 042183 31 DPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRM 110 (179)
Q Consensus 31 ~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~ 110 (179)
.++||.|+..|+.++++.|++ .+..++..+..|.| |||+|+..|+.+++++|+++|++++.
T Consensus 93 ~t~L~~A~~~~~~~~~~~Ll~------~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~------------ 153 (223)
T 2f8y_A 93 TTPLILAARLAVEGMLEDLIN------SHADVNAVDDLGKS-ALHWAAAVNNVDAAVVLLKNGANKDM------------ 153 (223)
T ss_dssp CCHHHHHHHHTCHHHHHHHHH------TTCCTTCBCTTSCB-HHHHHHHTTCHHHHHHHHHTTCCTTC------------
T ss_pred CcHHHHHHHhCcHHHHHHHHH------cCCCCcCcCCCCCc-HHHHHHHcCCHHHHHHHHHcCCCCCC------------
Confidence 355555555555555555554 44555666666777 77777777777777777777666655
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCC
Q 042183 111 MNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSV 176 (179)
Q Consensus 111 ~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~ 176 (179)
++..|.||||+|+..|+.+++++|++.|+++. ..+..|.||+++|+. .++.+++++|+++|+..
T Consensus 154 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~-~~~~~i~~~L~~~g~~~ 217 (223)
T 2f8y_A 154 QNNREETPLFLAAREGSYETAKVLLDHFANRD-ITDHMDRLPRDIAQE-RMHHDIVRLLDEYNLVR 217 (223)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHH-TTCHHHHHHHHHTTCSS
T ss_pred cCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCc-cccccCCCHHHHHHH-hcchHHHHHHHHcCCCc
Confidence 88999999999999999999999999999976 889999999999999 99999999999999754
No 41
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.94 E-value=1.1e-25 Score=163.70 Aligned_cols=132 Identities=22% Similarity=0.264 Sum_probs=116.1
Q ss_pred HHHHHHHHcCChHHHHHHHHH------------------------------------HHHhhCcccccccCCCCCcHHHH
Q 042183 32 PNLFKAAAAGNLEPFKDMARE------------------------------------EILEICPSLLLQVNAKGDSRSLL 75 (179)
Q Consensus 32 ~~l~~A~~~g~~~~~~~ll~~------------------------------------~~~~~~~~~~~~~~~~g~t~~L~ 75 (179)
++|+.|+..|+.++|+.|++. ..+...+..++..|.+|.| |||
T Consensus 13 ~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~T-pLh 91 (269)
T 4b93_B 13 EKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSS-PLH 91 (269)
T ss_dssp HHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTSCC-HHH
T ss_pred hHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCC-HHH
Confidence 568888888888888888740 0112245667889999999 999
Q ss_pred HHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHH
Q 042183 76 VAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCM 155 (179)
Q Consensus 76 ~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~ 155 (179)
+|+..|+.+++++|++.+++++. ++..|.||+|+|+..++.+++++|++.|++++ .+|..|.||||+
T Consensus 92 ~A~~~g~~~~v~~Ll~~~a~~~~------------~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n-~~d~~g~TpL~~ 158 (269)
T 4b93_B 92 VAALHGRADLIPLLLKHGANAGA------------RNADQAVPLHLACQQGHFQVVKCLLDSNAKPN-KKDLSGNTPLIY 158 (269)
T ss_dssp HHHHTTCTTHHHHHHHTTCCTTC------------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTCCCHHHH
T ss_pred HHHHcCcHHHHHHHHhcCCCcCc------------cCCCCCCccccccccChHHHHHHHHHCCCCCC-CCCCCCCCHHHH
Confidence 99999999999999999998877 89999999999999999999999999999986 899999999999
Q ss_pred HHHhcCCHHHHHHHHhcCCCCCC
Q 042183 156 VAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 156 A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
|+. .|+.+++++|+++|++++.
T Consensus 159 A~~-~g~~~~v~~Ll~~gadvn~ 180 (269)
T 4b93_B 159 ACS-GGHHELVALLLQHGASINA 180 (269)
T ss_dssp HHH-TTCGGGHHHHHHTTCCTTC
T ss_pred HHH-CCCHHHHHHHHHCCCCCCc
Confidence 999 9999999999999999864
No 42
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.94 E-value=4e-25 Score=153.65 Aligned_cols=129 Identities=22% Similarity=0.202 Sum_probs=94.7
Q ss_pred cCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhh-cccCCchhhhhhHH
Q 042183 29 QIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERA-KLLQHEDEELESGM 107 (179)
Q Consensus 29 ~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~~~~~ 107 (179)
...+|||.|+..|+.++++.|++ .+..++..+..|.| |||+|+..|+.+++++|++.+ ...+.
T Consensus 38 ~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t-~l~~A~~~~~~~~~~~Ll~~~~~~~~~--------- 101 (201)
T 3hra_A 38 EGNTPLNIAVHNNDIEIAKALID------RGADINLQNSISDS-PYLYAGAQGRTEILAYMLKHATPDLNK--------- 101 (201)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHH------TTCCTTCCCTTSCC-HHHHHHHTTCHHHHHHHHHHSCCCTTC---------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHH------cCCCCCCCCCCCCC-HHHHHHHcCCHHHHHHHHhccCccccc---------
Confidence 34578888888888888888877 56667777778888 888888888888888888443 34444
Q ss_pred HHhccCCCCcHHHHHHHcCCHHHHHHHHhcC-CCCCCCCCCCCCCHHHHHHHhcCC-----HHHHHHHHhcCCCCCC
Q 042183 108 IRMMNKEKHTALHEAVFHKIVDVVKILTRED-LDYPYSANNYNKTPLCMVAEYEHS-----SHMVVAILKNCTSVSH 178 (179)
Q Consensus 108 ~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~-~~~~~~~~~~g~tpl~~A~~~~~~-----~~~~~~Ll~~g~~~~~ 178 (179)
++..|.||||+|+..|+.+++++|++.| ++++ ..+..|.||||+|+. .+. .+++++|+++|++++.
T Consensus 102 ---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~~g~t~L~~A~~-~~~~~~~~~~~v~~Ll~~ga~~~~ 173 (201)
T 3hra_A 102 ---HNRYGGNALIPAAEKGHIDNVKLLLEDGREDID-FQNDFGYTALIEAVG-LREGNQLYQDIVKLLMENGADQSI 173 (201)
T ss_dssp ---CCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTT-CCCTTSCCHHHHHHH-SSCCSHHHHHHHHHHHHTTCCTTC
T ss_pred ---ccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcC-CCCCCCCCHHHHHHH-hccchhhHHHHHHHHHHCCCCCCc
Confidence 6667777777777777777777777777 5544 677777777777777 666 7777777777776653
No 43
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=2.1e-26 Score=164.72 Aligned_cols=127 Identities=17% Similarity=0.106 Sum_probs=116.3
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHH
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIR 109 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~ 109 (179)
..++||.|+..|+.++++.|++ .+..++.+|..|.| |||+|+..|+.+++++|+++|++++.
T Consensus 37 ~~t~L~~A~~~g~~~~v~~Ll~------~g~~~~~~d~~g~t-~L~~A~~~g~~~~v~~Ll~~ga~~~~----------- 98 (239)
T 1ycs_B 37 PLALLLDSSLEGEFDLVQRIIY------EVDDPSLPNDEGIT-ALHNAVCAGHTEIVKFLVQFGVNVNA----------- 98 (239)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTS------TTSSCCCCCTTSCC-HHHHHHHHTCHHHHHHHHHHTCCTTC-----------
T ss_pred hhHHHHHHHHcCCHHHHHHHHH------cCCCCCCcCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCCc-----------
Confidence 3588999999999999999987 56688899999999 99999999999999999999998887
Q ss_pred hccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCC-CHHHHH--HHhcCCHHHHHHHHhcCCCCC
Q 042183 110 MMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNK-TPLCMV--AEYEHSSHMVVAILKNCTSVS 177 (179)
Q Consensus 110 ~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~-tpl~~A--~~~~~~~~~~~~Ll~~g~~~~ 177 (179)
+|..|+||||+|+..|+.+++++|++.|++++ ..+..|. ||||+| +. .|+.+++++|+++|++++
T Consensus 99 -~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~~~~t~l~~a~~~~-~g~~~~~~~Ll~~~a~~~ 166 (239)
T 1ycs_B 99 -ADSDGWTPLHCAASCNNVQVCKFLVESGAAVF-AMTYSDMQTAADKCEEME-EGYTQCSQFLYGVQEKMG 166 (239)
T ss_dssp -CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCSSSCCCHHHHCCSSS-TTCCCHHHHHHHHHHHTT
T ss_pred -cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-eecCCCCcchHHHHHHhh-hccHHHHHHHHHhhhccc
Confidence 99999999999999999999999999999987 6777776 999999 78 899999999999987654
No 44
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.93 E-value=5.1e-25 Score=156.99 Aligned_cols=142 Identities=12% Similarity=0.115 Sum_probs=98.9
Q ss_pred ccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhc----ccCCchhh-
Q 042183 28 LQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAK----LLQHEDEE- 102 (179)
Q Consensus 28 ~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~----~~~~~~~~- 102 (179)
....+|||.|+..|+.++++.|++ .+..++..+..|.| |||+|+..|+.+++++|++.+. ..+.....
T Consensus 44 ~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t-~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g 116 (241)
T 1k1a_A 44 NLRQTPLHLAVITTLPSVVRLLVT------AGASPMALDRHGQT-AAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDG 116 (241)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCC-HHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTS
T ss_pred ccCCCHHHHHHHcCCHHHHHHHHH------cCCCccccCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCccccccccCcCC
Confidence 334567777777777777777776 44455556666666 6666666666666666666654 22221000
Q ss_pred --------------------hhhHHHHhcc-CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcC
Q 042183 103 --------------------LESGMIRMMN-KEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEH 161 (179)
Q Consensus 103 --------------------~~~~~~~~~~-~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~ 161 (179)
..+..++..+ ..|.||||+|+..|+.+++++|++.|++++ ..|..|.||||+|+. .|
T Consensus 117 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~-~~ 194 (241)
T 1k1a_A 117 LTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVN-AQMYSGSSALHSASG-RG 194 (241)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CBCTTSCBHHHHHHH-HT
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHH-cC
Confidence 0111122255 678899999999999999999999988876 788889999999999 99
Q ss_pred CHHHHHHHHhcCCCCCC
Q 042183 162 SSHMVVAILKNCTSVSH 178 (179)
Q Consensus 162 ~~~~~~~Ll~~g~~~~~ 178 (179)
+.+++++|+++|++++.
T Consensus 195 ~~~~v~~Ll~~ga~~~~ 211 (241)
T 1k1a_A 195 LLPLVRTLVRSGADSSL 211 (241)
T ss_dssp CHHHHHHHHHTTCCTTC
T ss_pred CHHHHHHHHhcCCCCCC
Confidence 99999999999988764
No 45
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=1.2e-26 Score=152.47 Aligned_cols=130 Identities=20% Similarity=0.250 Sum_probs=114.5
Q ss_pred CccccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhh
Q 042183 25 ISQLQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELE 104 (179)
Q Consensus 25 ~~~~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~ 104 (179)
.......++||.|+..|+.+.++.|++ .+..++.+|..|.| |||+|+..|+.+++++|++++++++.
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~------~g~~~~~~~~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~~~------ 71 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQ------NGSDPNVKDHAGWT-PLHEACNHGHLKVVELLLQHKALVNT------ 71 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHH------TTCCSCCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTTC------
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCCCcCCCCCCC-HHHHHHHcCCHHHHHHHHHcCCcccC------
Confidence 344556789999999999999999987 66778889999999 99999999999999999999998877
Q ss_pred hHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCC
Q 042183 105 SGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTS 175 (179)
Q Consensus 105 ~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~ 175 (179)
++..|+||||+|+..|+.+++++|++.|+++. .+|..|.||+++|+. .+..+++++|.+.+..
T Consensus 72 ------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~tpl~~A~~-~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 72 ------TGYQNDSPLHDAAKNGHVDIVKLLLSYGASRN-AVNIFGLRPVDYTDD-ESMKSLLLLPEKNESS 134 (137)
T ss_dssp ------CCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCGGGGCCC-HHHHHHHSCC------
T ss_pred ------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHhh-ccHHHHHhhccccccC
Confidence 89999999999999999999999999999986 899999999999999 9999999888877644
No 46
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.93 E-value=5.6e-25 Score=156.58 Aligned_cols=127 Identities=24% Similarity=0.302 Sum_probs=92.4
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhc
Q 042183 32 PNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMM 111 (179)
Q Consensus 32 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~ 111 (179)
++||.|+..|+.++++.|++ ..+..++..+..|.| |||+|+..|+.+++++|+++|.+++. +
T Consensus 79 t~L~~A~~~~~~~~~~~Ll~-----~~~~~~~~~~~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~~~------------~ 140 (237)
T 3b7b_A 79 TCLHLAAKKGHYEVVQYLLS-----NGQMDVNCQDDGGWT-PMIWATEYKHVDLVKLLLSKGSDINI------------R 140 (237)
T ss_dssp CHHHHHHHTTCHHHHHHHHT-----TTCCCTTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTTC------------C
T ss_pred cHHHHHHHcCCHHHHHHHHh-----CCCCCcccCCCCCCC-HHHHHHHcCCHHHHHHHHHCCCCCCc------------c
Confidence 44444444444444444433 233455555666666 66666666666666666666665554 7
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 112 NKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 112 ~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
+..|.||||+|+..|+.+++++|++.|++++ ..|..|.||||+|+. .|+.+++++|+++|++++.
T Consensus 141 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~gad~~~ 205 (237)
T 3b7b_A 141 DNEENICLHWAAFSGCVDIAEILLAAKCDLH-AVNIHGDSPLHIAAR-ENRYDCVVLFLSRDSDVTL 205 (237)
T ss_dssp CTTSCCHHHHHHHHCCHHHHHHHHTTTCCTT-CCCTTCCCHHHHHHH-TTCHHHHHHHHTTTCCTTC
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHH-hCCHhHHHHHHHcCCCCCc
Confidence 8889999999999999999999999998876 788889999999999 9999999999999988764
No 47
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.93 E-value=5.7e-25 Score=156.14 Aligned_cols=141 Identities=15% Similarity=0.091 Sum_probs=115.9
Q ss_pred cccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccc-----cccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchh
Q 042183 27 QLQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLL-----LQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDE 101 (179)
Q Consensus 27 ~~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~-----~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~ 101 (179)
.....+|||.|+..|+.++++.|++ .+..+ +..|..|.| |||+|+..|+.+++++|+++|++++....
T Consensus 34 ~~~g~t~L~~A~~~g~~~~v~~Ll~------~~~~~~~~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 106 (232)
T 2rfa_A 34 GAMGETALHIAALYDNLEAAMVLME------AAPELVFEPMTSELYEGQT-ALHIAVINQNVNLVRALLARGASVSARAT 106 (232)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHH------HCGGGGGCCCCSTTTTTCC-HHHHHHHTTCHHHHHHHHHTTCCTTCCCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHH------cCchhccccccccCCCCcC-HHHHHHHcCCHHHHHHHHhCCCCCCcccC
Confidence 4456789999999999999999987 22222 556789999 99999999999999999999988776110
Q ss_pred h-hhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHH----HHHHhcCCCC
Q 042183 102 E-LESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMV----VAILKNCTSV 176 (179)
Q Consensus 102 ~-~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~----~~Ll~~g~~~ 176 (179)
. ......+..+..|.||||+|+..|+.+++++|++.|++++ ..|..|.||||+|+. .|+.+++ ++|+++|+++
T Consensus 107 ~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~t~L~~A~~-~~~~~~~~~i~~~Ll~~g~~~ 184 (232)
T 2rfa_A 107 GSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIR-AQDSLGNTVLHILIL-QPNKTFACQMYNLLLSYDGGD 184 (232)
T ss_dssp SGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHT-CSCHHHHHHHHHHHHHTTCSC
T ss_pred CcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHH-cCChHHHHHHHHHHHhcCCch
Confidence 0 0000111223479999999999999999999999999986 899999999999999 9999988 9999999865
No 48
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.93 E-value=9.2e-26 Score=160.79 Aligned_cols=135 Identities=19% Similarity=0.164 Sum_probs=118.6
Q ss_pred cccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhH
Q 042183 27 QLQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESG 106 (179)
Q Consensus 27 ~~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~ 106 (179)
.....+|||.|+..|+.++++.|++..........++..+..|.| |||+|+..|+.+++++|+++|++++.
T Consensus 75 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~-------- 145 (236)
T 1ikn_D 75 DFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHT-CLHLASIHGYLGIVELLVSLGADVNA-------- 145 (236)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCC-HHHHHHHTTCHHHHHHHHHHTCCTTC--------
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCCC--------
Confidence 344568999999999999999998721111112346778899999 99999999999999999999998877
Q ss_pred HHHhccC-CCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCC
Q 042183 107 MIRMMNK-EKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSV 176 (179)
Q Consensus 107 ~~~~~~~-~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~ 176 (179)
++. .|+||||+|+..|+.+++++|++.|++++ ..|..|.|||++|+. .|+.+++++|+++|++.
T Consensus 146 ----~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~tpl~~A~~-~~~~~~~~~Ll~~ga~~ 210 (236)
T 1ikn_D 146 ----QEPCNGRTALHLAVDLQNPDLVSLLLKCGADVN-RVTYQGYSPYQLTWG-RPSTRIQQQLGQLTLEN 210 (236)
T ss_dssp ----CCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSC-CCCTTCCCGGGGCTT-SSCHHHHHHHHTTSCGG
T ss_pred ----CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-cccCCCCCHHHHHHc-cCchHHHHHHHHcchhh
Confidence 887 89999999999999999999999999987 899999999999999 99999999999999864
No 49
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.93 E-value=6.7e-25 Score=152.50 Aligned_cols=127 Identities=25% Similarity=0.247 Sum_probs=116.8
Q ss_pred cccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhh-cccCCchhhhhh
Q 042183 27 QLQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERA-KLLQHEDEELES 105 (179)
Q Consensus 27 ~~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~~~ 105 (179)
.....+|||.|+..|+.++++.|++ ..+..++..+..|.| |||+|+..|+.+++++|++++ .+.+.
T Consensus 69 ~~~g~t~l~~A~~~~~~~~~~~Ll~-----~~~~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~~------- 135 (201)
T 3hra_A 69 NSISDSPYLYAGAQGRTEILAYMLK-----HATPDLNKHNRYGGN-ALIPAAEKGHIDNVKLLLEDGREDIDF------- 135 (201)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHH-----HSCCCTTCCCTTSCC-SHHHHHHTTCHHHHHHHHHHCCCCTTC-------
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-----ccCcccccccCCCCc-HHHHHHHcCCHHHHHHHHHcCCCCcCC-------
Confidence 3445689999999999999999985 466778889999999 999999999999999999999 76666
Q ss_pred HHHHhccCCCCcHHHHHHHcCC-----HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcC
Q 042183 106 GMIRMMNKEKHTALHEAVFHKI-----VDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNC 173 (179)
Q Consensus 106 ~~~~~~~~~g~t~l~~A~~~g~-----~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g 173 (179)
++..|+||||+|+..+. .+++++|++.|++++ ..|..|.|||++|+. .|+.+++++|+++|
T Consensus 136 -----~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~-~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 136 -----QNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQS-IKDNSGRTAMDYANQ-KGYTEISKILAQYN 201 (201)
T ss_dssp -----CCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHH-HTCHHHHHHHHTCC
T ss_pred -----CCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCC-ccCCCCCCHHHHHHH-cCCHhHHHHHHhcC
Confidence 89999999999999998 999999999999986 899999999999999 99999999999987
No 50
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.93 E-value=8.1e-25 Score=163.55 Aligned_cols=140 Identities=16% Similarity=0.095 Sum_probs=107.0
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchh--------
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDE-------- 101 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~-------- 101 (179)
..+|||.|+..|+.++++.|++ .+..++..+..|.| |||+|+..|+.+++++|+++|++++....
T Consensus 91 g~t~L~~A~~~g~~~iv~~Ll~------~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~ 163 (351)
T 3utm_A 91 GLVPLHNACSYGHYEVTELLLK------HGACVNAMDLWQFT-PLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDM 163 (351)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTCCC-HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCcHHHHHHHCCCHHHHHHHHH------CCCCCCCCCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHH
Confidence 3456666666666666666655 45566777777777 88888888888888888877766543110
Q ss_pred ----------------------------------------------------------------h------hhhHHHHhc
Q 042183 102 ----------------------------------------------------------------E------LESGMIRMM 111 (179)
Q Consensus 102 ----------------------------------------------------------------~------~~~~~~~~~ 111 (179)
. ..+..++.+
T Consensus 164 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~ 243 (351)
T 3utm_A 164 APTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEK 243 (351)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCC
T ss_pred HhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCc
Confidence 0 111123457
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 112 NKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 112 ~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
+..|+||||+|+..|+.+++++|++.|++++ ..|..|.||||+|+. .|+.+++++|+++|++++.
T Consensus 244 ~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n-~~d~~g~t~L~~A~~-~~~~~~v~~Ll~~gad~~~ 308 (351)
T 3utm_A 244 NKDFMTPLHVAAERAHNDVMEVLHKHGAKMN-ALDSLGQTALHRAAL-AGHLQTCRLLLSYGSDPSI 308 (351)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHH-HTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHH-cCcHHHHHHHHHcCCCCCC
Confidence 7889999999999999999999999999986 889999999999999 9999999999999998864
No 51
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.93 E-value=8.7e-25 Score=158.16 Aligned_cols=128 Identities=20% Similarity=0.183 Sum_probs=94.9
Q ss_pred ccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHH
Q 042183 28 LQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGM 107 (179)
Q Consensus 28 ~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~ 107 (179)
....+|||.|+..|+.++++.|++ .+..++ .+..|.| |||+|+..|+.+++++|+++|++++.
T Consensus 67 ~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~-~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~--------- 129 (261)
T 2xai_A 67 ADWHTPLFNACVSGSWDCVNLLLQ------HGASVQ-PESDLAS-PIHEAARRGHVECVNSLIAYGGNIDH--------- 129 (261)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHH------TTCCSS-CSCTTCC-HHHHHHHTTCHHHHHHHHHTTCCTTC---------
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHH------CCCCCC-CCCCCCC-HHHHHHHcCcHHHHHHHHHcCCCCCc---------
Confidence 344577888888888888877776 344433 3445777 88888888888888888888777666
Q ss_pred HHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 108 IRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 108 ~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
++..|.||||+|+..|+.+++++|++.|++++ .+..|.||||+|+. .|+.+++++|+++|++++.
T Consensus 130 ---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t~Lh~A~~-~~~~~~v~~Ll~~gad~~~ 194 (261)
T 2xai_A 130 ---KISHLGTPLYLACENQQRACVKKLLESGADVN--QGKGQDSPLHAVAR-TASEELACLLMDFGADTQA 194 (261)
T ss_dssp ---CBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTT--CCBTTBCHHHHHHH-HTCHHHHHHHHHTTCCTTC
T ss_pred ---CCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC--CCCCCCChHHHHHH-cCCHHHHHHHHHcCCCCCC
Confidence 77777888888888888888888888877765 36777788888888 7888888888888877654
No 52
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.93 E-value=1e-24 Score=155.20 Aligned_cols=140 Identities=20% Similarity=0.177 Sum_probs=93.3
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhh-------
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEE------- 102 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~------- 102 (179)
..++||.|+..|+.++++.|++ .+..++..+..|.| |||+|+..|+.+++++|+++|...+.....
T Consensus 11 g~t~L~~A~~~g~~~~v~~Ll~------~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 83 (237)
T 3b7b_A 11 KRSPLHAAAEAGHVDICHMLVQ------AGANIDTCSEDQRT-PLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHL 83 (237)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHH------TTCCTTCCCTTCCC-HHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHH
T ss_pred CCCHHHHHHHcCcHHHHHHHHH------cCCCcCccCCCCCC-HHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Confidence 4466777777777777666665 44455666666666 666666666666666666666555441111
Q ss_pred --------------hhh-HHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHH
Q 042183 103 --------------LES-GMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVV 167 (179)
Q Consensus 103 --------------~~~-~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ 167 (179)
... ..++..+..|+||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+. .|+.++++
T Consensus 84 A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~-~~~~~~~~ 161 (237)
T 3b7b_A 84 AAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDIN-IRDNEENICLHWAAF-SGCVDIAE 161 (237)
T ss_dssp HHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHH-HCCHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-ccCCCCCCHHHHHHH-CCCHHHHH
Confidence 000 1223356677888888888888888888888877765 677778888888888 88888888
Q ss_pred HHHhcCCCCCC
Q 042183 168 AILKNCTSVSH 178 (179)
Q Consensus 168 ~Ll~~g~~~~~ 178 (179)
+|+++|++++.
T Consensus 162 ~Ll~~g~~~~~ 172 (237)
T 3b7b_A 162 ILLAAKCDLHA 172 (237)
T ss_dssp HHHTTTCCTTC
T ss_pred HHHHcCCCCCC
Confidence 88888877653
No 53
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.93 E-value=1e-25 Score=162.61 Aligned_cols=127 Identities=18% Similarity=0.088 Sum_probs=115.6
Q ss_pred cCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccC--------------CCCCcHHHHHHHHcCCHHHHHHHHH---
Q 042183 29 QIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVN--------------AKGDSRSLLVAAKFGHCDIVSVLIE--- 91 (179)
Q Consensus 29 ~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~--------------~~g~t~~L~~A~~~g~~~~v~~ll~--- 91 (179)
...++||.|+..|+.++++.|++ .+..++..+ ..|.| |||+|+..|+.+++++|++
T Consensus 92 ~g~t~L~~A~~~g~~~~v~~Ll~------~ga~~~~~~~~~~~~~~~~~~~~~~g~t-pL~~A~~~g~~~~v~~Ll~~~~ 164 (260)
T 3jxi_A 92 RGQTALHIAIERRCKHYVELLVE------KGADVHAQARGRFFQPKDEGGYFYFGEL-PLSLAACTNQPHIVHYLTENGH 164 (260)
T ss_dssp ESBCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCEECCCSSSCCCCSCCSCSS-HHHHHHHTTCHHHHHHHHHCSS
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh------CCCCcCccccccccCcccccccccCCCC-HHHHHHHcCCHHHHHHHHhccc
Confidence 45689999999999999999998 667777777 68999 9999999999999999999
Q ss_pred hhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCC---------HHHHHHHHhcCCCCC------CCCCCCCCCHHHHH
Q 042183 92 RAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKI---------VDVVKILTREDLDYP------YSANNYNKTPLCMV 156 (179)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~---------~~~~~~Ll~~~~~~~------~~~~~~g~tpl~~A 156 (179)
+|++++. +|..|+||||+|+..++ .+++++|++.|+++. +..|..|.||||+|
T Consensus 165 ~ga~~~~------------~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A 232 (260)
T 3jxi_A 165 KQADLRR------------QDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMA 232 (260)
T ss_dssp CCCCTTC------------CCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHH
T ss_pred cCCCCcc------------cCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHH
Confidence 8888877 99999999999999888 799999999998863 36899999999999
Q ss_pred HHhcCCHHHHHHHHhcCCC
Q 042183 157 AEYEHSSHMVVAILKNCTS 175 (179)
Q Consensus 157 ~~~~~~~~~~~~Ll~~g~~ 175 (179)
+. .|+.+++++|+++|++
T Consensus 233 ~~-~g~~~~v~~Ll~~g~~ 250 (260)
T 3jxi_A 233 AK-TGKIGIFQHIIRREIA 250 (260)
T ss_dssp HH-TTCHHHHHHHHHHHHH
T ss_pred HH-cCCHHHHHHHHHhCCC
Confidence 99 9999999999999854
No 54
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.93 E-value=3.6e-25 Score=161.56 Aligned_cols=126 Identities=16% Similarity=0.206 Sum_probs=79.3
Q ss_pred cccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcc-cccccC--------------------------------------C
Q 042183 27 QLQIDPNLFKAAAAGNLEPFKDMAREEILEICPS-LLLQVN--------------------------------------A 67 (179)
Q Consensus 27 ~~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~-~~~~~~--------------------------------------~ 67 (179)
.....+|||.|+..|+.++++.|++ .+. .++..+ .
T Consensus 108 d~~g~T~Lh~A~~~g~~~~v~~Ll~------~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~ 181 (276)
T 4hbd_A 108 DSNGNTALHYSVSHANFPVVQQLLD------SGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQ 181 (276)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHH------TSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTT
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHH------CCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCC
Confidence 4456789999999999999999987 222 334444 4
Q ss_pred CCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHh-cCCCCCCCCC
Q 042183 68 KGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTR-EDLDYPYSAN 146 (179)
Q Consensus 68 ~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~-~~~~~~~~~~ 146 (179)
.|.| |||+|+..|+.+++++|+++|++++. +|..|+||||+|+..|+.+++++|++ .|++++ ..|
T Consensus 182 ~g~t-pLh~A~~~g~~~~v~~Ll~~gad~n~------------~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~-~~d 247 (276)
T 4hbd_A 182 AGQT-ALMLAVSHGRVDVVKALLACEADVNV------------QDDDGSTALMCACEHGHKEIAGLLLAVPSCDIS-LTD 247 (276)
T ss_dssp TCCC-HHHHHHHTTCHHHHHHHHHTTCCTTC------------CCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTT-CCC
T ss_pred CCCC-HHHHHHHcCCHHHHHHHHhCCCCCCC------------CCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCc-CcC
Confidence 4555 56666666666666666666555554 55566666666666666666666665 455544 555
Q ss_pred CCCCCHHHHHHHhcCCHHHHHHHHhcC
Q 042183 147 NYNKTPLCMVAEYEHSSHMVVAILKNC 173 (179)
Q Consensus 147 ~~g~tpl~~A~~~~~~~~~~~~Ll~~g 173 (179)
..|.|||++|+. .|+.+++++|++++
T Consensus 248 ~~g~TpL~~A~~-~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 248 RDGSTALMVALD-AGQSEIASMLYSRM 273 (276)
T ss_dssp TTSCCHHHHHHH-HTCHHHHHHHHHHC
T ss_pred CCCCCHHHHHHH-cCCHHHHHHHHhcc
Confidence 666666666666 66666666665543
No 55
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.93 E-value=1.9e-25 Score=160.96 Aligned_cols=128 Identities=22% Similarity=0.173 Sum_probs=116.1
Q ss_pred ccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCC-------------CCcHHHHHHHHcCCHHHHHHHHH---
Q 042183 28 LQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAK-------------GDSRSLLVAAKFGHCDIVSVLIE--- 91 (179)
Q Consensus 28 ~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~-------------g~t~~L~~A~~~g~~~~v~~ll~--- 91 (179)
....+|||.|+..|+.++++.|++ .+..++..+.. |.| |||+|+..|+.+++++|++
T Consensus 88 ~~g~t~L~~A~~~g~~~~v~~Ll~------~ga~~~~~~~~~~~~~~~~~~~~~g~t-pL~~A~~~~~~~~v~~Ll~~~~ 160 (256)
T 2etb_A 88 YQGHSALHIAIEKRSLQCVKLLVE------NGADVHLRACGRFFQKHQGTCFYFGEL-PLSLAACTKQWDVVTYLLENPH 160 (256)
T ss_dssp TTTCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCCSGGGSCCSSSCCCSCSS-HHHHHHHTTCHHHHHHHHHCSS
T ss_pred ccCCCHHHHHHHcCCHHHHHHHHH------cCCCCCcccccccccccccccccCCCC-HHHHHHHcCCHHHHHHHHhccc
Confidence 346799999999999999999998 56677777775 999 9999999999999999999
Q ss_pred hhcccCCchhhhhhHHHHhccCCCCcHHHHHHH--cCCHH-------HHHHHHhcCCCCC------CCCCCCCCCHHHHH
Q 042183 92 RAKLLQHEDEELESGMIRMMNKEKHTALHEAVF--HKIVD-------VVKILTREDLDYP------YSANNYNKTPLCMV 156 (179)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~--~g~~~-------~~~~Ll~~~~~~~------~~~~~~g~tpl~~A 156 (179)
+|++++. +|..|+||||+|+. .++.+ ++++|++.|+++. +.+|..|.||||+|
T Consensus 161 ~ga~~n~------------~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A 228 (256)
T 2etb_A 161 QPASLEA------------TDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLA 228 (256)
T ss_dssp CCCCTTC------------CCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHH
T ss_pred cCCCcCc------------cCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHH
Confidence 8998877 99999999999999 88888 9999999999872 38899999999999
Q ss_pred HHhcCCHHHHHHHHhcCCC
Q 042183 157 AEYEHSSHMVVAILKNCTS 175 (179)
Q Consensus 157 ~~~~~~~~~~~~Ll~~g~~ 175 (179)
+. .|+.+++++|+++|++
T Consensus 229 ~~-~g~~~~v~~Ll~~g~~ 246 (256)
T 2etb_A 229 AK-EGKIEIFRHILQREFS 246 (256)
T ss_dssp HH-TTCHHHHHHHHHHHHH
T ss_pred HH-hCCHHHHHHHHhCCCC
Confidence 99 9999999999999854
No 56
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.93 E-value=5e-25 Score=164.67 Aligned_cols=131 Identities=18% Similarity=0.197 Sum_probs=120.6
Q ss_pred ccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHH
Q 042183 28 LQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGM 107 (179)
Q Consensus 28 ~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~ 107 (179)
....++|+.|+..|+.+.++.++. ..+..++..|..|.| |||+|+..|+.+++++|+++|++++.
T Consensus 22 ~~~~~~L~~A~~~g~~~~v~~ll~-----~~~~~~~~~d~~g~t-~L~~A~~~g~~~~v~~Ll~~g~~~~~--------- 86 (351)
T 3utm_A 22 EYKKDELLEAARSGNEEKLMALLT-----PLNVNCHASDGRKST-PLHLAAGYNRVRIVQLLLQHGADVHA--------- 86 (351)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHCC-----TTTTTCCCSSTTCCC-HHHHHHHTTCHHHHHHHHHTTCCTTC---------
T ss_pred cccchhHHHHHHcCCHHHHHHHHH-----hcCCCcccCCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCCc---------
Confidence 334578999999999999988875 457778889999999 99999999999999999999998877
Q ss_pred HHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 108 IRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 108 ~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
++..|+||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+. .|+.+++++|+++|++++.
T Consensus 87 ---~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~-~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~~~~ 152 (351)
T 3utm_A 87 ---KDKGGLVPLHNACSYGHYEVTELLLKHGACVN-AMDLWQFTPLHEAAS-KNRVEVCSLLLSHGADPTL 152 (351)
T ss_dssp ---CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHH-TTCHHHHHHHHHTTCCTTC
T ss_pred ---cCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHH-cCCHHHHHHHHHcCCCCcc
Confidence 89999999999999999999999999999986 889999999999999 9999999999999998764
No 57
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.93 E-value=1.1e-25 Score=145.19 Aligned_cols=115 Identities=21% Similarity=0.227 Sum_probs=104.5
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHH
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIR 109 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~ 109 (179)
.+++||.|+..|+.+.++.|++ .+..++.+|..|.| |||+|+..|+.+++++|+++|++++.
T Consensus 7 ~~~~l~~A~~~~~~~~v~~ll~------~~~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~----------- 68 (123)
T 3aaa_C 7 CDKEFMWALKNGDLDEVKDYVA------KGEDVNRTLEGGRK-PLHYAADCGQLEILEFLLLKGADINA----------- 68 (123)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHH------TTCCTTSCCTTSSC-HHHHHHHTTCHHHHHHHHTTTCCTTC-----------
T ss_pred cchHHHHHHHcCCHHHHHHHHH------cCCCcCccCCCCCc-HHHHHHHcCCHHHHHHHHHcCCCCCc-----------
Confidence 4589999999999999999987 56678889999999 99999999999999999999998877
Q ss_pred hccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHH
Q 042183 110 MMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHM 165 (179)
Q Consensus 110 ~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~ 165 (179)
+|..|+||||+|+..|+.+++++|++.|+++. .+|..|.||+++|.. .+..++
T Consensus 69 -~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~-~~~~~l 121 (123)
T 3aaa_C 69 -PDKHHITPLLSAVYEGHVSCVKLLLSKGADKT-VKGPDGLTAFEATDN-QAIKAL 121 (123)
T ss_dssp -CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHCCC-HHHHHH
T ss_pred -CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHhCC-HHHHHH
Confidence 99999999999999999999999999999976 899999999999976 444433
No 58
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.93 E-value=3.9e-25 Score=173.43 Aligned_cols=125 Identities=18% Similarity=0.153 Sum_probs=114.3
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhhCccccccc------CCCCCcHHHHHHHH---cCCHHHHHHHHHhhcccCCchhh
Q 042183 32 PNLFKAAAAGNLEPFKDMAREEILEICPSLLLQV------NAKGDSRSLLVAAK---FGHCDIVSVLIERAKLLQHEDEE 102 (179)
Q Consensus 32 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~------~~~g~t~~L~~A~~---~g~~~~v~~ll~~~~~~~~~~~~ 102 (179)
..||.|+..|+.+.++.|++ .+..++.. +..|.| |||+||. .|+.+++++|+++|++++.
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~------~g~~~n~~~~~~~~~~~g~t-~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~---- 202 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFA------NGQDFGQPLPGPDAQAPEEL-VLHLAVKVANQASLPLVDFIIQNGGHLDA---- 202 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHH------TTCCSSSCBCCSSSCCSCBC-HHHHHHHTCCTTTHHHHHHHHHHSCCTTC----
T ss_pred HHHHHHHhccCHHHHHHHHh------hcccccCCCCCcccccccch-HHHHHHHhcccccHHHHHHHHHcCCCCCc----
Confidence 56999999999999999998 55666655 889999 9999977 8999999999999998888
Q ss_pred hhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCC
Q 042183 103 LESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVS 177 (179)
Q Consensus 103 ~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~ 177 (179)
+|..|+||||+|+..|+.+++++|++.|++++ .+|..|.||||+|+. .|+.+++++|+++|++++
T Consensus 203 --------~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~-~~~~~~~~~Ll~~ga~~~ 267 (497)
T 3lvq_E 203 --------KAADGNTALHYAALYNQPDCLKLLLKGRALVG-TVNEAGETALDIARK-KHHKECEELLEQAQAGTF 267 (497)
T ss_dssp --------CCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCS-CCCTTCCCHHHHHHH-TTCHHHHHHHHHTCC---
T ss_pred --------cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHH-cCCHHHHHHHHHhCCCCC
Confidence 99999999999999999999999999999987 899999999999999 999999999999999875
No 59
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.93 E-value=1.4e-24 Score=159.11 Aligned_cols=141 Identities=17% Similarity=0.159 Sum_probs=96.3
Q ss_pred ccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhh-----
Q 042183 28 LQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEE----- 102 (179)
Q Consensus 28 ~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~----- 102 (179)
....++||.|+..|+.++++.|++ .+..++.+|..|.| |||+|+..|+.+++++|+++|++++.....
T Consensus 57 ~~g~t~L~~Aa~~g~~~~v~~Ll~------~g~~~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L 129 (285)
T 3d9h_A 57 VSDWSPMHEAAIHGHQLSLRNLIS------QGWAVNIITADHVS-PLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPL 129 (285)
T ss_dssp CCSCCHHHHHHHTTCHHHHHHHHH------TTCCSCEECTTCCC-HHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHH
T ss_pred ccCCCHHHHHHHcCCHHHHHHHHH------CCCCCCCcCCCCCC-HHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 335689999999999999999987 56678889999999 999999999999999999998887762111
Q ss_pred ----------hhhHHHH-----hccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHH
Q 042183 103 ----------LESGMIR-----MMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVV 167 (179)
Q Consensus 103 ----------~~~~~~~-----~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ 167 (179)
.....+. ..+..|.||||+|+..|+.+++++|++.|++++ ..|..|.||||+|+. .|+.++++
T Consensus 130 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~d~~g~t~L~~A~~-~~~~~~v~ 207 (285)
T 3d9h_A 130 FNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNID-HKISHLGTPLYLACE-NQQRACVK 207 (285)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTT-CCBTTTBCHHHHHHH-TTCHHHHH
T ss_pred HHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHH-cCcHHHHH
Confidence 0000000 012335666666666666666666666666654 556666666666666 66666666
Q ss_pred HHHhcCCCCC
Q 042183 168 AILKNCTSVS 177 (179)
Q Consensus 168 ~Ll~~g~~~~ 177 (179)
+|+++|++++
T Consensus 208 ~Ll~~ga~~~ 217 (285)
T 3d9h_A 208 KLLESGADVN 217 (285)
T ss_dssp HHHHTTCCTT
T ss_pred HHHHCCCCCC
Confidence 6666665543
No 60
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.93 E-value=5.8e-25 Score=135.15 Aligned_cols=93 Identities=27% Similarity=0.391 Sum_probs=87.5
Q ss_pred CCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC
Q 042183 68 KGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANN 147 (179)
Q Consensus 68 ~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~ 147 (179)
+|.| |||+|+..|+.+++++|++.|++++. ++..|+||||+|+..|+.+++++|++.|++++ .+|.
T Consensus 1 ~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~n~------------~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~d~ 66 (93)
T 1n0q_A 1 NGRT-PLHLAARNGHLEVVKLLLEAGADVNA------------KDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-AKDK 66 (93)
T ss_dssp --CC-HHHHHHHHTCHHHHHHHHHTTCCTTC------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCT
T ss_pred CCCc-HHHHHHHcCCHHHHHHHHHcCCCCcc------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCC
Confidence 4789 99999999999999999999998887 99999999999999999999999999999986 8999
Q ss_pred CCCCHHHHHHHhcCCHHHHHHHHhcCCC
Q 042183 148 YNKTPLCMVAEYEHSSHMVVAILKNCTS 175 (179)
Q Consensus 148 ~g~tpl~~A~~~~~~~~~~~~Ll~~g~~ 175 (179)
.|.||||+|+. .|+.+++++|+++|++
T Consensus 67 ~g~t~l~~A~~-~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 67 NGRTPLHLAAR-NGHLEVVKLLLEAGAY 93 (93)
T ss_dssp TSCCHHHHHHH-TTCHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHH-cCCHHHHHHHHHcCCC
Confidence 99999999999 9999999999999975
No 61
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.93 E-value=5.5e-26 Score=160.69 Aligned_cols=127 Identities=24% Similarity=0.260 Sum_probs=110.5
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHh-hcccCCchhhhhhHHH
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIER-AKLLQHEDEELESGMI 108 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~~~~~~ 108 (179)
..++||.|+..|+.++++.|++ .+..++.+|..|.| |||+|+..|+.+++++|++. +++.+.
T Consensus 73 g~t~L~~A~~~g~~~~v~~Ll~------~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~~g~~~~~---------- 135 (222)
T 3ehr_A 73 IDNPLHEAAKRGNLSWLRECLD------NRVGVNGLDKAGST-ALYWACHGGHKDIVEMLFTQPNIELNQ---------- 135 (222)
T ss_dssp ESCHHHHHHHHTCHHHHHHHHH------TTCCTTCCCTTSCC-HHHHHHHTTCHHHHHHHTTSTTCCCCC----------
T ss_pred cccccccccccCcHHHHHHHHh------CCCCccccCCCCCC-HHHHHHHcCCHHHHHHHHcCCCCCccc----------
Confidence 3579999999999999999987 66778889999999 99999999999999999998 888877
Q ss_pred HhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCC
Q 042183 109 RMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVS 177 (179)
Q Consensus 109 ~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~ 177 (179)
++..|+||||+|+..|+.+++++|++.|++++ .+|..|.|||++|+. .++.++++.|++.|+...
T Consensus 136 --~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~-~~~~~~l~~l~~~~~~~~ 200 (222)
T 3ehr_A 136 --QNKLGDTALHAAAWKGYADIVQLLLAKGARTD-LRNIEKKLAFDMATN-AACASLLKKKQGTDAVRT 200 (222)
T ss_dssp --CCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSC-CCCTTSCCHHHHCCS-HHHHHHHC----------
T ss_pred --cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-cccCCCCCHHHHhcc-hhHHHHHHHHhccchhhh
Confidence 99999999999999999999999999999986 899999999999999 999999999999987653
No 62
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.93 E-value=1.6e-24 Score=153.24 Aligned_cols=130 Identities=18% Similarity=0.156 Sum_probs=110.5
Q ss_pred ccCCHHHHHHHHcCChHHHHHHHHHHHHhhCc--ccccc-cCCCCCcHHHHHHHHcCCHHHHHHHHHhh--cccCCchhh
Q 042183 28 LQIDPNLFKAAAAGNLEPFKDMAREEILEICP--SLLLQ-VNAKGDSRSLLVAAKFGHCDIVSVLIERA--KLLQHEDEE 102 (179)
Q Consensus 28 ~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~--~~~~~-~~~~g~t~~L~~A~~~g~~~~v~~ll~~~--~~~~~~~~~ 102 (179)
....++||.|+..|+.++++.|++ .+ ..++. .+..|.| |||+|+..|+.+++++|++++ .+.+.
T Consensus 34 ~~g~t~L~~A~~~~~~~~v~~Ll~------~~~~~~~~~~~~~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~~~~~---- 102 (228)
T 2dzn_A 34 QDGRIPLHWSVSFQAHEITSFLLS------KMENVNLDDYPDDSGWT-PFHIACSVGNLEVVKSLYDRPLKPDLNK---- 102 (228)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHH------TCTTCCGGGCCCTTSCC-HHHHHHHHCCHHHHHHHHSSSSCCCTTC----
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh------ccccccccccCCCCCCC-HHHHHHHcCCHHHHHHHHhCCCCccccc----
Confidence 345678888888888888888877 33 33444 7788888 999999888889999988887 55554
Q ss_pred hhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcC-CCCCC
Q 042183 103 LESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNC-TSVSH 178 (179)
Q Consensus 103 ~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g-~~~~~ 178 (179)
++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+. .|+.+++++|+++| ++++.
T Consensus 103 --------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~~~~~ 169 (228)
T 2dzn_A 103 --------ITNQGVTCLHLAVGKKWFEVSQFLIENGASVR-IKDKFNQIPLHRAAS-VGSLKLIELLCGLGKSAVNW 169 (228)
T ss_dssp --------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHH-TTCHHHHHHHHTTTCCCSCC
T ss_pred --------CCcCCCCHHHHHHHcCCHhHHHHHHHcCCCcc-ccCCCCCCHHHHHHH-cCCHHHHHHHHhcCcccccC
Confidence 78899999999999999999999999999976 889999999999999 99999999999999 77764
No 63
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=1.2e-25 Score=160.84 Aligned_cols=128 Identities=20% Similarity=0.107 Sum_probs=90.8
Q ss_pred cCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHH
Q 042183 29 QIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMI 108 (179)
Q Consensus 29 ~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~ 108 (179)
...++||.|+..|+.+.++.|++ .+..++. +..|.| |||+|+..|+.+++++|++.+++++.
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~------~g~~~~~-~~~~~t-~L~~A~~~g~~~~v~~Ll~~g~~~~~---------- 65 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIA------HGMRVKF-NPLPLA-LLLDSSLEGEFDLVQRIIYEVDDPSL---------- 65 (239)
T ss_dssp ----------------------------------------CHH-HHHHHHHHTCHHHHHHHTSTTSSCCC----------
T ss_pred cccccCchhhhhhhHHHHHHHhc------cCCCccc-CchhhH-HHHHHHHcCCHHHHHHHHHcCCCCCC----------
Confidence 35689999999999999999988 4445553 467889 99999999999999999999998887
Q ss_pred HhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 109 RMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 109 ~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
++..|.||||+|+..|+.+++++|++.|++++ .+|..|.||||+|+. .|+.+++++|+++|++++.
T Consensus 66 --~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~d~~g~tpL~~A~~-~~~~~~v~~Ll~~ga~~~~ 131 (239)
T 1ycs_B 66 --PNDEGITALHNAVCAGHTEIVKFLVQFGVNVN-AADSDGWTPLHCAAS-CNNVQVCKFLVESGAAVFA 131 (239)
T ss_dssp --CCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTT-CCCTTCCCHHHHHHH-TTCHHHHHHHHHTTCCTTC
T ss_pred --cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHH-cCCHHHHHHHHHcCCCcce
Confidence 89999999999999999999999999999986 899999999999999 9999999999999998864
No 64
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.93 E-value=9.9e-25 Score=159.44 Aligned_cols=123 Identities=18% Similarity=0.187 Sum_probs=112.8
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhhCccc------ccccCCCCCcHHHHHHHHc---CCHHHHHHHHHhhcccCCchhh
Q 042183 32 PNLFKAAAAGNLEPFKDMAREEILEICPSL------LLQVNAKGDSRSLLVAAKF---GHCDIVSVLIERAKLLQHEDEE 102 (179)
Q Consensus 32 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~------~~~~~~~g~t~~L~~A~~~---g~~~~v~~ll~~~~~~~~~~~~ 102 (179)
.+|+.|+..|+.+.++.+++ .+.. ++..+..|.| |||+|+.. |+.+++++|+++|++++.
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~------~g~~~~~~~~l~~~~~~g~t-~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~---- 200 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYA------DGVDLTEKIPLANGHEPDET-ALHLAVRSVDRTSLHIVDFLVQNSGNLDK---- 200 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHH------TTCCTTSBCCCSSCSSTTCB-HHHHHHHHCCTTTHHHHHHHHHHCSCTTC----
T ss_pred hhhhhHhhhcccHHHHHHHH------hhcchhhhccccccccCCCC-cchHHHHhcccchHHHHHHHHHCCCCccc----
Confidence 57999999999999998887 2333 4556889999 99999999 899999999999998887
Q ss_pred hhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCC
Q 042183 103 LESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTS 175 (179)
Q Consensus 103 ~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~ 175 (179)
+|..|+||||+|+..|+.+++++|++.|++++ .+|..|.||||+|+. .|+.+++++|+++|++
T Consensus 201 --------~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~-~~d~~g~tpL~~A~~-~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 201 --------QTGKGSTALHYCCLTDNAECLKLLLRGKASIE-IANESGETPLDIAKR-LKHEHCEELLTQALSG 263 (278)
T ss_dssp --------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHH-TTCHHHHHHHHHHHTT
T ss_pred --------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CccCCCCCHHHHHHH-cCCHHHHHHHHHcCCC
Confidence 99999999999999999999999999999987 899999999999999 9999999999999875
No 65
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.93 E-value=2.7e-24 Score=153.24 Aligned_cols=147 Identities=22% Similarity=0.217 Sum_probs=116.5
Q ss_pred cccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhh----
Q 042183 27 QLQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEE---- 102 (179)
Q Consensus 27 ~~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~---- 102 (179)
.....++||.|+..|+.+.++.|++. +...+..++..|..|.| |||+|+..|+.+++++|+++|.+++.....
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~--~~~~~~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 82 (241)
T 1k1a_A 6 DEDGDTPLHIAVVQGNLPAVHRLVNL--FQQGGRELDIYNNLRQT-PLHLAVITTLPSVVRLLVTAGASPMALDRHGQTA 82 (241)
T ss_dssp -CTTCCHHHHHHHTTCHHHHHHHHHH--HHHTTCCSCCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHH--HHhcCCCCCcccccCCC-HHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCH
Confidence 34467899999999999999999862 23466788889999999 999999999999999999999887663221
Q ss_pred ---------------h--hhH----HHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCC-CCCCCHHHHHHHhc
Q 042183 103 ---------------L--ESG----MIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSAN-NYNKTPLCMVAEYE 160 (179)
Q Consensus 103 ---------------~--~~~----~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~-~~g~tpl~~A~~~~ 160 (179)
. ... .++..+..|+||||+|+..|+.+++++|++.|++++ ..+ ..|.||||+|+. .
T Consensus 83 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~~g~t~L~~A~~-~ 160 (241)
T 1k1a_A 83 AHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADID-AVDIKSGRSPLIHAVE-N 160 (241)
T ss_dssp HHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTTCCCHHHHHHH-T
T ss_pred HHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcc-cccccCCCcHHHHHHH-c
Confidence 0 001 334556678888888888888888888888888876 455 678888888888 8
Q ss_pred CCHHHHHHHHhcCCCCCC
Q 042183 161 HSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 161 ~~~~~~~~Ll~~g~~~~~ 178 (179)
|+.+++++|+++|++++.
T Consensus 161 ~~~~~v~~Ll~~g~~~~~ 178 (241)
T 1k1a_A 161 NSLSMVQLLLQHGANVNA 178 (241)
T ss_dssp TCHHHHHHHHHTTCCTTC
T ss_pred CCHHHHHHHHHcCCCCCC
Confidence 888888888888887753
No 66
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=1.3e-24 Score=167.52 Aligned_cols=126 Identities=24% Similarity=0.259 Sum_probs=89.7
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhc
Q 042183 32 PNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMM 111 (179)
Q Consensus 32 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~ 111 (179)
+|||.|+..|+.++++.|++ .+..++..+..|.| |||+|+..|+.+++++|+++|...+. +
T Consensus 247 t~L~~A~~~g~~~~v~~Ll~------~~~~~~~~~~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~~~------------~ 307 (437)
T 1n11_A 247 TPLHLAAQEGHAEMVALLLS------KQANGNLGNKSGLT-PLHLVAQEGHVPVADVLIKHGVMVDA------------T 307 (437)
T ss_dssp CHHHHHHHTTCHHHHHHHHT------TTCCTTCCCTTCCC-HHHHHHHHTCHHHHHHHHHHTCCTTC------------C
T ss_pred CHHHHHHHCCCHHHHHHHHh------cCCCCCCCCCCCCC-HHHHHHHcCCHHHHHHHHhCCccCCC------------C
Confidence 34444444444444444433 23334444455555 55555555555555555555544444 8
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 112 NKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 112 ~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
+..|+||||+|+..|+.+++++|++.|++++ .+|..|.||||+|+. .|+.+++++|+++|++++.
T Consensus 308 ~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n-~~~~~g~t~L~~A~~-~g~~~iv~~Ll~~ga~~~~ 372 (437)
T 1n11_A 308 TRMGYTPLHVASHYGNIKLVKFLLQHQADVN-AKTKLGYSPLHQAAQ-QGHTDIVTLLLKNGASPNE 372 (437)
T ss_dssp CSSCCCHHHHHHHSSCSHHHHHHHHTTCCTT-CCCTTSCCHHHHHHH-TTCHHHHHHHHHTTCCSCC
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHhcCCCCC-CCCCCCCCHHHHHHH-CChHHHHHHHHHCcCCCCC
Confidence 8899999999999999999999999999976 889999999999999 9999999999999998864
No 67
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.93 E-value=3.4e-25 Score=162.34 Aligned_cols=127 Identities=17% Similarity=0.136 Sum_probs=86.1
Q ss_pred cccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhH
Q 042183 27 QLQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESG 106 (179)
Q Consensus 27 ~~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~ 106 (179)
.....+|||.|+..|+.++++.|++ .+..++.. +|.| |||+|+..|+.+++++|+++|++++.
T Consensus 28 d~~g~t~L~~A~~~g~~~~v~~Ll~------~g~~~~~~--~g~t-~L~~A~~~g~~~~v~~Ll~~ga~~~~-------- 90 (285)
T 3kea_A 28 DVHGHSASYYAIADNNVRLVCTLLN------AGALKNLL--ENEF-PLHQAATLEDTKIVKILLFSGLDDSQ-------- 90 (285)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHH------TTGGGSCC--TTCC-HHHHHTTSSSCHHHHHHHHTTCCTTC--------
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh------CCCCCCCC--CCCC-HHHHHHHcCCHHHHHHHHHCCCCCCC--------
Confidence 3445678888888888888888877 34445544 3677 77777777777777777777776665
Q ss_pred HHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCC-CCHHHHHHHhcCCHHHHHHHHhcCCCC
Q 042183 107 MIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYN-KTPLCMVAEYEHSSHMVVAILKNCTSV 176 (179)
Q Consensus 107 ~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g-~tpl~~A~~~~~~~~~~~~Ll~~g~~~ 176 (179)
++..|+||||+|+..|+.+++++|++.|++++ ..+..| .||||+|+. .|+.+++++|+++|+++
T Consensus 91 ----~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~g~~t~L~~A~~-~~~~~~v~~Ll~~g~~~ 155 (285)
T 3kea_A 91 ----FDDKGNTALYYAVDSGNMQTVKLFVKKNWRLM-FYGKTGWKTSFYHAVM-LNDVSIVSYFLSEIPST 155 (285)
T ss_dssp ----CCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGG-GCSSSGGGSHHHHHHH-TTCHHHHHHHHTTSCTT
T ss_pred ----cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCC-ccCCCCCCCHHHHHHH-cCCHHHHHHHHhCCCcc
Confidence 66666666666666666666666666666654 556666 566666666 66666666666666543
No 68
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.93 E-value=1.4e-24 Score=159.43 Aligned_cols=128 Identities=17% Similarity=0.197 Sum_probs=115.5
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHH
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIR 109 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~ 109 (179)
..++|+.|+..|+.+.++.|++ .+..++..|..|.| |||+|+..|+.+++++|+++|++++.
T Consensus 40 ~~t~l~~A~~~g~~~~v~~Ll~------~g~~~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~ga~~~~----------- 101 (299)
T 1s70_B 40 DGAVFLAACSSGDTEEVLRLLE------RGADINYANVDGLT-ALHQACIDDNVDMVKFLVENGANINQ----------- 101 (299)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHH------HCCCTTCBCTTCCB-HHHHHHHTTCHHHHHHHHHTTCCTTC-----------
T ss_pred CccHHHHHHHcCCHHHHHHHHH------cCCCCcccCCCCCC-HHHHHHHcCCHHHHHHHHHCCCCCCC-----------
Confidence 3488999999999999999987 55678889999999 99999999999999999999998877
Q ss_pred hccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCC-------------------------------------------
Q 042183 110 MMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSAN------------------------------------------- 146 (179)
Q Consensus 110 ~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~------------------------------------------- 146 (179)
++..|+||||+|+..|+.+++++|++.|+++. ..+
T Consensus 102 -~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 179 (299)
T 1s70_B 102 -PDNEGWIPLHAAASCGYLDIAEYLISQGAHVG-AVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLR 179 (299)
T ss_dssp -CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred -CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC-CcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHH
Confidence 89999999999999999999999999998764 333
Q ss_pred -----------------CCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 147 -----------------NYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 147 -----------------~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
..|.||||+|+. .|+.+++++|+++|++++.
T Consensus 180 ~~~~~l~~~~~~~~~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~g~d~~~ 227 (299)
T 1s70_B 180 DARQWLNSGHINDVRHAKSGGTALHVAAA-KGYTEVLKLLIQARYDVNI 227 (299)
T ss_dssp HHHHHHHHTCCCCCCCTTTCCCHHHHHHH-HTCHHHHHHHHTTTCCTTC
T ss_pred HHHHHHhccCcchhhhcCCCCCHHHHHHH-CCcHHHHHHHHHcCCCCCC
Confidence 357789999999 9999999999999998864
No 69
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=2.3e-24 Score=156.72 Aligned_cols=131 Identities=19% Similarity=0.174 Sum_probs=121.0
Q ss_pred cCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCC----HHHHHHHHHhhcccCCchhhhh
Q 042183 29 QIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGH----CDIVSVLIERAKLLQHEDEELE 104 (179)
Q Consensus 29 ~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~----~~~v~~ll~~~~~~~~~~~~~~ 104 (179)
...++||.|+..|+.++++.|++ ..+..++..+..|.| |||+|+..++ .+++++|+++|++++.
T Consensus 147 ~g~t~L~~A~~~~~~~~v~~Ll~-----~~~~~~~~~~~~g~t-~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~------ 214 (285)
T 1wdy_A 147 GGATALMDAAEKGHVEVLKILLD-----EMGADVNACDNMGRN-ALIHALLSSDDSDVEAITHLLLDHGADVNV------ 214 (285)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHH-----TSCCCTTCCCTTSCC-HHHHHHHCSCTTTHHHHHHHHHHTTCCSSC------
T ss_pred CCCcHHHHHHHcCCHHHHHHHHH-----hcCCCCCccCCCCCC-HHHHHHHccccchHHHHHHHHHHcCCCCCC------
Confidence 34589999999999999999987 347788999999999 9999999999 8999999999998887
Q ss_pred hHHHHhccCCCCcHHHHHHHcCCHHHHHHHHh-cCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCCC
Q 042183 105 SGMIRMMNKEKHTALHEAVFHKIVDVVKILTR-EDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSHR 179 (179)
Q Consensus 105 ~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~-~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~r 179 (179)
++..|.||||+|+..|+.+++++|++ .|++++ ..|..|.||||+|+. .|+.+++++|+++|++++.+
T Consensus 215 ------~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~-~~~~~g~t~l~~A~~-~~~~~i~~~Ll~~Ga~~~~~ 282 (285)
T 1wdy_A 215 ------RGERGKTPLILAVEKKHLGLVQRLLEQEHIEIN-DTDSDGKTALLLAVE-LKLKKIAELLCKRGASTDCG 282 (285)
T ss_dssp ------CCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTT-CCCTTSCCHHHHHHH-TTCHHHHHHHHHHSSCSCCS
T ss_pred ------cCCCCCcHHHHHHHcCCHHHHHHHHhccCCCcc-ccCCCCCcHHHHHHH-cCcHHHHHHHHHcCCCCCcc
Confidence 89999999999999999999999999 788876 899999999999999 99999999999999998753
No 70
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.93 E-value=5.3e-25 Score=166.13 Aligned_cols=128 Identities=16% Similarity=0.219 Sum_probs=118.4
Q ss_pred cccCCHHHHHHHHcC--ChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcc-----cCCc
Q 042183 27 QLQIDPNLFKAAAAG--NLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKL-----LQHE 99 (179)
Q Consensus 27 ~~~~~~~l~~A~~~g--~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~-----~~~~ 99 (179)
.....++||.|+..| +.++++.|++ .+..++..|..|.| |||+|+..|+.+++++|++++++ .+.
T Consensus 135 ~~~g~t~L~~A~~~g~~~~~~v~~Ll~------~ga~~~~~d~~g~t-~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~- 206 (364)
T 3ljn_A 135 HCKGQTALHWCVGLGPEYLEMIKILVQ------LGASPTAKDKADET-PLMRAMEFRNREALDLMMDTVPSKSSLRLDY- 206 (364)
T ss_dssp EESCCCHHHHHHHSCGGGHHHHHHHHH------HTCCTTCCCTTSCC-HHHHHHHTTCHHHHHHHHHHCSCSSSCCTTC-
T ss_pred CCCCCCHHHHHHHcCCchHHHHHHHHH------cCCCCcccCCCCCC-HHHHHHHcCCHHHHHHHHhcccccccccccc-
Confidence 334568999999999 9999999998 56778899999999 99999999999999999999987 555
Q ss_pred hhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCC
Q 042183 100 DEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTS 175 (179)
Q Consensus 100 ~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~ 175 (179)
++..|+||||+|+..|+.+++++|++.|++++ ..|..|.|||++|+. .|+.+++++|+++|++
T Consensus 207 -----------~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~-~~d~~g~tpL~~A~~-~g~~~~v~~Ll~~~~~ 269 (364)
T 3ljn_A 207 -----------ANKQGNSHLHWAILINWEDVAMRFVEMGIDVN-MEDNEHTVPLYLSVR-AAMVLLTKELLQKTDV 269 (364)
T ss_dssp -----------CCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTT-CCCTTSCCHHHHHHH-TCCHHHHHHHHHHSCH
T ss_pred -----------cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHH-hChHHHHHHHHHcCCc
Confidence 89999999999999999999999999999986 899999999999999 9999999999999865
No 71
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=2.8e-24 Score=156.28 Aligned_cols=128 Identities=16% Similarity=0.124 Sum_probs=117.4
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCccccccc-CCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHH
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQV-NAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMI 108 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~-~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~ 108 (179)
..++|+.|++.|+.+.++.|++ .+..++.. +..|.| |||+|+..|+.+++++|+++|++++.
T Consensus 5 g~~~L~~A~~~g~~~~v~~Ll~------~g~~~~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~g~~~~~---------- 67 (285)
T 1wdy_A 5 DNHLLIKAVQNEDVDLVQQLLE------GGANVNFQEEEGGWT-PLHNAVQMSREDIVELLLRHGADPVL---------- 67 (285)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTTCCC-HHHHHHHTTCHHHHHHHHHTTCCTTC----------
T ss_pred cchHHHHHHHcCCHHHHHHHHH------cCCCcccccCCCCCc-HHHHHHHcCCHHHHHHHHHcCCCCcc----------
Confidence 3578999999999999999987 45566666 788999 99999999999999999999998877
Q ss_pred HhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 109 RMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 109 ~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+. .|+.+++++|+++|++++.
T Consensus 68 --~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~-~~~~~~~~~Ll~~g~~~~~ 133 (285)
T 1wdy_A 68 --RKKNGATPFLLAAIAGSVKLLKLFLSKGADVN-ECDFYGFTAFMEAAV-YGKVKALKFLYKRGANVNL 133 (285)
T ss_dssp --CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CBCTTCCBHHHHHHH-TTCHHHHHHHHHTTCCTTC
T ss_pred --cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCcccCCHHHHHHH-hCCHHHHHHHHHhCCCccc
Confidence 89999999999999999999999999999976 889999999999999 9999999999999988753
No 72
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.92 E-value=9.8e-25 Score=163.10 Aligned_cols=142 Identities=16% Similarity=0.122 Sum_probs=118.4
Q ss_pred cCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCC-CCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhh-----
Q 042183 29 QIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNA-KGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEE----- 102 (179)
Q Consensus 29 ~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~-~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~----- 102 (179)
+.+++|+.|++.|++++|+.|++ .+..++.++. .|+| |||+|+..|+.+++++|+++|+.++.....
T Consensus 24 ~~~t~L~~Av~~g~~~~V~~LL~------~Gadvn~~~~~~g~T-pLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~ 96 (337)
T 4g8k_A 24 EDNHLLIKAVQNEDVDLVQQLLE------GGANVNFQEEEGGWT-PLHNAVQMSREDIVELLLRHGADPVLRKKNGATPF 96 (337)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHH------HTCCTTCCCTTTCCC-HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred CCChHHHHHHHcCCHHHHHHHHH------CCCCCCccCCCCCcC-HHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchh
Confidence 34588999999999999999998 5667787775 5899 999999999999999999999987763322
Q ss_pred ----------------hhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCC---------CCCCCCCCHHHHHH
Q 042183 103 ----------------LESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPY---------SANNYNKTPLCMVA 157 (179)
Q Consensus 103 ----------------~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~---------~~~~~g~tpl~~A~ 157 (179)
.....++.++..|.||+|+|+..|+.+++++|++.|++++. ..+..|.||||+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~ 176 (337)
T 4g8k_A 97 ILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAA 176 (337)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHH
T ss_pred HHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHH
Confidence 22234567888999999999999999999999999987641 23456899999999
Q ss_pred HhcCCHHHHHHHHh-cCCCCCC
Q 042183 158 EYEHSSHMVVAILK-NCTSVSH 178 (179)
Q Consensus 158 ~~~~~~~~~~~Ll~-~g~~~~~ 178 (179)
. .|+.+++++|++ .|++++.
T Consensus 177 ~-~g~~~~v~~LL~~~gad~n~ 197 (337)
T 4g8k_A 177 E-KGHVEVLKILLDEMGADVNA 197 (337)
T ss_dssp H-HTCHHHHHHHHHHSCCCTTC
T ss_pred H-CCCHHHHHHHHhccCCCcCc
Confidence 9 999999999996 4788764
No 73
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.92 E-value=1.2e-24 Score=156.68 Aligned_cols=142 Identities=18% Similarity=0.167 Sum_probs=113.7
Q ss_pred CHHHHHHHHcCChHHHHHHHHHHHHhhCcccccc----cCCCCCcHHHHHHHHc---CCHHHHHHHHHhhcccCCchhhh
Q 042183 31 DPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQ----VNAKGDSRSLLVAAKF---GHCDIVSVLIERAKLLQHEDEEL 103 (179)
Q Consensus 31 ~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~----~~~~g~t~~L~~A~~~---g~~~~v~~ll~~~~~~~~~~~~~ 103 (179)
.++||.|+..|+.+.++.|++.. ...+..++. .|..|.| |||+|+.. |+.+++++|++.|+..+.....
T Consensus 3 ~t~L~~A~~~g~~~~v~~ll~~l--~~~g~~i~~~~~~~d~~g~t-~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~- 78 (256)
T 2etb_A 3 RDRLFSVVSRGVPEELTGLLEYL--RWNSKYLTDSAYTEGSTGKT-CLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPL- 78 (256)
T ss_dssp HHHHHHHHHHTCGGGGTTHHHHH--HHHTCCTTSGGGSBTTTTBC-HHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCG-
T ss_pred ccHHHHHHHcCCHHHHHHHHHHH--HHcCCCcccccccCCCCCCC-HHHHHHHccccchHHHHHHHHhcCCcccchhhh-
Confidence 47899999999999776665411 124556676 8999999 99999999 9999999999999876530000
Q ss_pred hhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCC-------------CCCHHHHHHHhcCCHHHHHHHH
Q 042183 104 ESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNY-------------NKTPLCMVAEYEHSSHMVVAIL 170 (179)
Q Consensus 104 ~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~-------------g~tpl~~A~~~~~~~~~~~~Ll 170 (179)
........|..|+||||+|+..|+.+++++|++.|++++ ..+.. |.||||+|+. .|+.+++++|+
T Consensus 79 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~~~~~~~~~~~~~g~tpL~~A~~-~~~~~~v~~Ll 156 (256)
T 2etb_A 79 VNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVH-LRACGRFFQKHQGTCFYFGELPLSLAAC-TKQWDVVTYLL 156 (256)
T ss_dssp GGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCCSGGGSCCSSSCCCSCSSHHHHHHH-TTCHHHHHHHH
T ss_pred cccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCC-cccccccccccccccccCCCCHHHHHHH-cCCHHHHHHHH
Confidence 000001134679999999999999999999999999986 66665 9999999999 99999999999
Q ss_pred h---cCCCCCC
Q 042183 171 K---NCTSVSH 178 (179)
Q Consensus 171 ~---~g~~~~~ 178 (179)
+ +|++++.
T Consensus 157 ~~~~~ga~~n~ 167 (256)
T 2etb_A 157 ENPHQPASLEA 167 (256)
T ss_dssp HCSSCCCCTTC
T ss_pred hccccCCCcCc
Confidence 9 8998864
No 74
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.92 E-value=3.8e-24 Score=156.76 Aligned_cols=142 Identities=20% Similarity=0.168 Sum_probs=119.7
Q ss_pred ccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhh-----
Q 042183 28 LQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEE----- 102 (179)
Q Consensus 28 ~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~----- 102 (179)
....+|||.|+..|+.++++.|++ .+..++..|..|.| |||+|+..|+.+++++|++++.+.+.....
T Consensus 90 ~~g~t~L~~A~~~g~~~~v~~Ll~------~ga~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~ 162 (285)
T 3d9h_A 90 ADHVSPLHEACLGGHLSCVKILLK------HGAQVNGVTADWHT-PLFNACVSGSWDCVNLLLQHGASVQPESDLASPIH 162 (285)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHH------TTCCSSCCCTTCCC-HHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHH
T ss_pred CCCCCHHHHHHHCCcHHHHHHHHH------CCCCCCCCCCCCCC-HHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHH
Confidence 345689999999999999999987 56777888888999 999999999999999999988776542211
Q ss_pred ---------------hhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHH
Q 042183 103 ---------------LESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVV 167 (179)
Q Consensus 103 ---------------~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ 167 (179)
..+..++.++..|+||||+|+..|+.+++++|++.|++++ .+..|.||||+|+. .|+.++++
T Consensus 163 ~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~--~~~~g~t~L~~A~~-~~~~~~v~ 239 (285)
T 3d9h_A 163 EAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN--QGKGQDSPLHAVVR-TASEELAC 239 (285)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT--CCBTTBCHHHHHHH-TTCHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC--CCCCCCCHHHHHHH-cCCHHHHH
Confidence 1122345678899999999999999999999999999976 48899999999999 99999999
Q ss_pred HHHhcCCCCCCC
Q 042183 168 AILKNCTSVSHR 179 (179)
Q Consensus 168 ~Ll~~g~~~~~r 179 (179)
+|+++|++++.+
T Consensus 240 ~Ll~~gad~~~~ 251 (285)
T 3d9h_A 240 LLMDFGADTQAK 251 (285)
T ss_dssp HHHHTTCCTTCC
T ss_pred HHHHCCCCCCCc
Confidence 999999998653
No 75
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.92 E-value=1.1e-24 Score=164.47 Aligned_cols=99 Identities=13% Similarity=0.162 Sum_probs=90.8
Q ss_pred cCCCCCcHHHHHHHHcC--CHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCC--
Q 042183 65 VNAKGDSRSLLVAAKFG--HCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLD-- 140 (179)
Q Consensus 65 ~~~~g~t~~L~~A~~~g--~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~-- 140 (179)
.+..|.| |||+|+..| +.+++++|+++|++++. ++..|+||||+|+..|+.+++++|++.|++
T Consensus 134 ~~~~g~t-~L~~A~~~g~~~~~~v~~Ll~~ga~~~~------------~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~ 200 (364)
T 3ljn_A 134 KHCKGQT-ALHWCVGLGPEYLEMIKILVQLGASPTA------------KDKADETPLMRAMEFRNREALDLMMDTVPSKS 200 (364)
T ss_dssp EEESCCC-HHHHHHHSCGGGHHHHHHHHHHTCCTTC------------CCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSS
T ss_pred CCCCCCC-HHHHHHHcCCchHHHHHHHHHcCCCCcc------------cCCCCCCHHHHHHHcCCHHHHHHHHhcccccc
Confidence 7778889 999999999 88999999999888777 899999999999999999999999999988
Q ss_pred ---CCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 141 ---YPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 141 ---~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
++ ..|..|.||||+|+. .|+.+++++|+++|++++.
T Consensus 201 ~~~~~-~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~gad~~~ 239 (364)
T 3ljn_A 201 SLRLD-YANKQGNSHLHWAIL-INWEDVAMRFVEMGIDVNM 239 (364)
T ss_dssp SCCTT-CCCTTCCCTTHHHHT-TTCHHHHHHHHTTTCCTTC
T ss_pred ccccc-ccCCCCCcHHHHHHH-cCCHHHHHHHHHcCCCCCC
Confidence 66 789999999999999 9999999999999999864
No 76
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.92 E-value=1e-24 Score=162.75 Aligned_cols=132 Identities=18% Similarity=0.122 Sum_probs=115.5
Q ss_pred cccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCC---HHHHHHHHHhh-cccCCchhh
Q 042183 27 QLQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGH---CDIVSVLIERA-KLLQHEDEE 102 (179)
Q Consensus 27 ~~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~---~~~v~~ll~~~-~~~~~~~~~ 102 (179)
.....+|||.|+..|+.++++.|++ .+..++.+|..|.| |||+|+..|+ .++++.|++.+ .+.+
T Consensus 128 d~~g~TpLh~Aa~~g~~~~v~~Ll~------~Gad~n~~d~~g~T-pLh~A~~~g~~~~~~~~~~ll~~~~~~~~----- 195 (327)
T 1sw6_A 128 DEHGNTPLHWLTSIANLELVKHLVK------HGSNRLYGDNMGES-CLVKAVKSVNNYDSGTFEALLDYLYPCLI----- 195 (327)
T ss_dssp STTCCCHHHHHHHTTCHHHHHHHHH------TTCCTTBCCTTCCC-HHHHHHHSSHHHHTTCHHHHHHHHGGGGG-----
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHH------cCCCCCCcCCCCCC-HHHHHHHhcccccHHHHHHHHHhhhcccc-----
Confidence 3456799999999999999999998 67888999999999 9999999998 68888888887 4343
Q ss_pred hhhHHHHhccCCCCcHHHHHHH----cCCHHHHHHHHhcCC---------------------------------------
Q 042183 103 LESGMIRMMNKEKHTALHEAVF----HKIVDVVKILTREDL--------------------------------------- 139 (179)
Q Consensus 103 ~~~~~~~~~~~~g~t~l~~A~~----~g~~~~~~~Ll~~~~--------------------------------------- 139 (179)
.++..|+||||+|+. .|+.+++++|++.+.
T Consensus 196 -------~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~ 268 (327)
T 1sw6_A 196 -------LEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDL 268 (327)
T ss_dssp -------EECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSH
T ss_pred -------CCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHH
Confidence 489999999999999 999999999987632
Q ss_pred ------CCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCCC
Q 042183 140 ------DYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSHR 179 (179)
Q Consensus 140 ------~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~r 179 (179)
+++ .+|..|+||||+|+. .|+.+++++|+++|++++.+
T Consensus 269 ~~Ll~~~~n-~~d~~G~TpLh~A~~-~g~~~~v~~Ll~~Gad~~~~ 312 (327)
T 1sw6_A 269 KWIIANMLN-AQDSNGDTCLNIAAR-LGNISIVDALLDYGADPFIA 312 (327)
T ss_dssp HHHHHHTTT-CCCTTSCCHHHHHHH-HCCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHhCCC-CCCCCCCCHHHHHHH-cCCHHHHHHHHHcCCCCccc
Confidence 344 788999999999999 99999999999999998753
No 77
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.92 E-value=4.2e-25 Score=161.88 Aligned_cols=140 Identities=16% Similarity=0.138 Sum_probs=104.6
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchh----h---
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDE----E--- 102 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~----~--- 102 (179)
..+|||.|+..|+.++++.|++ .+..++.+|..|.| |||+|+..|+.+++++|+++|++++.... +
T Consensus 62 g~t~L~~A~~~g~~~~v~~Ll~------~ga~~~~~d~~g~t-~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~ 134 (285)
T 3kea_A 62 NEFPLHQAATLEDTKIVKILLF------SGLDDSQFDDKGNT-ALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFY 134 (285)
T ss_dssp TCCHHHHHTTSSSCHHHHHHHH------TTCCTTCCCTTSCC-HHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHH------CCCCCCCcCCCCCc-HHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHH
Confidence 4688888888888888888887 56677788888888 88888888888888888888877665211 1
Q ss_pred -------------hhhHHHHhccC-CCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCH-HHHHHHhcCCHHHHH
Q 042183 103 -------------LESGMIRMMNK-EKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTP-LCMVAEYEHSSHMVV 167 (179)
Q Consensus 103 -------------~~~~~~~~~~~-~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tp-l~~A~~~~~~~~~~~ 167 (179)
+........+. .|+||||+|+..|+.+++++|++.|++++ ..+..|.|| ||+|+. .|+.++++
T Consensus 135 ~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n-~~~~~g~t~~L~~A~~-~~~~~~v~ 212 (285)
T 3kea_A 135 HAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYMTSTN-TNNSLLFIPDIKLAID-NKDIEMLQ 212 (285)
T ss_dssp HHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-TTCCCBCCTTHHHHHH-HTCHHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHHHHHcCCCCC-cccCCCCChHHHHHHH-cCCHHHHH
Confidence 00000011222 67788888888888888888888888765 778888887 888888 88888888
Q ss_pred HHHhcCCCCCC
Q 042183 168 AILKNCTSVSH 178 (179)
Q Consensus 168 ~Ll~~g~~~~~ 178 (179)
+|+++|++++.
T Consensus 213 ~Ll~~gad~~~ 223 (285)
T 3kea_A 213 ALFKYDINIYS 223 (285)
T ss_dssp HHTTSCBCSTT
T ss_pred HHHHcCCCCCC
Confidence 88888888764
No 78
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=2e-24 Score=159.45 Aligned_cols=123 Identities=19% Similarity=0.176 Sum_probs=113.4
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhhCcccccc------cCCCCCcHHHHHHHHc---CCHHHHHHHHHhhcccCCchhh
Q 042183 32 PNLFKAAAAGNLEPFKDMAREEILEICPSLLLQ------VNAKGDSRSLLVAAKF---GHCDIVSVLIERAKLLQHEDEE 102 (179)
Q Consensus 32 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~------~~~~g~t~~L~~A~~~---g~~~~v~~ll~~~~~~~~~~~~ 102 (179)
.+|+.|+..|+++.++.|++ .+..++. .+..|.| |||+|+.. |+.+++++|+++|++++.
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~------~g~d~~~~~~~~~~~~~g~t-~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~---- 221 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFA------NGQDFGQPLPGPDAQAPEEL-VLHLAVKVANQASLPLVDFIIQNGGHLDA---- 221 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHH------TTCCTTSCEECSSSCSCEEC-HHHHHHHTCCTTTHHHHHHHHHHSSCTTC----
T ss_pred HHHhhhhhccCHHHHHHHHh------cCCcccccCCCcccCCCCcc-HHHHHHHhcccCcHHHHHHHHhcCCCCCC----
Confidence 56999999999999999987 4555565 5889999 99999997 899999999999998887
Q ss_pred hhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCC
Q 042183 103 LESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTS 175 (179)
Q Consensus 103 ~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~ 175 (179)
+|..|+||||+|+..|+.+++++|++.|++++ .+|..|.|||++|+. .|+.+++++|+++|++
T Consensus 222 --------~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~-~~d~~G~TpL~~A~~-~~~~~iv~~Ll~~ga~ 284 (301)
T 2b0o_E 222 --------KAADGNTALHYAALYNQPDCLKLLLKGRALVG-TVNEAGETALDIARK-KHHKECEELLEQAQAG 284 (301)
T ss_dssp --------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCS-CCCTTSCCHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred --------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHH-cCCHHHHHHHHHhcCC
Confidence 99999999999999999999999999999986 899999999999999 9999999999998864
No 79
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.92 E-value=4.1e-24 Score=164.75 Aligned_cols=123 Identities=24% Similarity=0.282 Sum_probs=61.5
Q ss_pred CHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHh
Q 042183 31 DPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRM 110 (179)
Q Consensus 31 ~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~ 110 (179)
.+|||.|+..|+.+++++|++ .+..++..+..|.| |||+|+..|+.+++++|++++++++.
T Consensus 15 ~t~L~~Aa~~g~~~~v~~Ll~------~g~~~~~~~~~~~t-~L~~A~~~g~~~~v~~Ll~~g~~~~~------------ 75 (437)
T 1n11_A 15 LTPLHVASFMGHLPIVKNLLQ------RGASPNVSNVKVET-PLHMAARAGHTEVAKYLLQNKAKVNA------------ 75 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHH------TTCCSCCSSSCCCC-HHHHHHHHTCHHHHHHHHHHTCCSSC------------
T ss_pred CCHHHHHHHCCCHHHHHHHHH------cCCCCCCCCCCCCC-HHHHHHHcCCHHHHHHHHhCCCCCCC------------
Confidence 355666666666666655554 33444455555555 55555555555555555555555444
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCC
Q 042183 111 MNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCT 174 (179)
Q Consensus 111 ~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~ 174 (179)
++..|+||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+. .|+.+++++|+++++
T Consensus 76 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~~~ 137 (437)
T 1n11_A 76 KAKDDQTPLHCAARIGHTNMVKLLLENNANPN-LATTAGHTPLHIAAR-EGHVETVLALLEKEA 137 (437)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTT-CCCTTCCCHHHHHHH-HTCHHHHHHHHHTTC
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCC-CCCCCCCcHHHHHHH-cCCHHHHHHHHhCCC
Confidence 44444444444444444444444444444433 344444444444444 444444444444443
No 80
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.92 E-value=1.8e-24 Score=157.24 Aligned_cols=136 Identities=18% Similarity=0.143 Sum_probs=114.6
Q ss_pred cccCCHHHHHHHHc---CChHHHHHHHHHHHHhh-----CcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCC
Q 042183 27 QLQIDPNLFKAAAA---GNLEPFKDMAREEILEI-----CPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQH 98 (179)
Q Consensus 27 ~~~~~~~l~~A~~~---g~~~~~~~ll~~~~~~~-----~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~ 98 (179)
.....++||.|+.. |+.++++.|++...... ........|..|.| |||+|+..|+.+++++|+++|++++.
T Consensus 51 ~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~t-pL~~A~~~g~~~~v~~Ll~~ga~~~~ 129 (273)
T 2pnn_A 51 PETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQT-ALHIAIERRNMTLVTLLVENGADVQA 129 (273)
T ss_dssp TTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCC-HHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCC-HHHHHHHcCCHHHHHHHHHCCCCcCc
Confidence 34567999999987 99999999998332100 01112235678999 99999999999999999999998877
Q ss_pred chhhhhhHHHHhccC--------------CCCcHHHHHHHcCCHHHHHHHHh---cCCCCCCCCCCCCCCHHHHHHHhcC
Q 042183 99 EDEELESGMIRMMNK--------------EKHTALHEAVFHKIVDVVKILTR---EDLDYPYSANNYNKTPLCMVAEYEH 161 (179)
Q Consensus 99 ~~~~~~~~~~~~~~~--------------~g~t~l~~A~~~g~~~~~~~Ll~---~~~~~~~~~~~~g~tpl~~A~~~~~ 161 (179)
++. .|.||||+|+..|+.+++++|++ .|++++ .+|..|.||||+|+. .|
T Consensus 130 ------------~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~-~~d~~g~tpLh~A~~-~~ 195 (273)
T 2pnn_A 130 ------------AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADIS-ARDSVGNTVLHALVE-VA 195 (273)
T ss_dssp ------------CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTT-CCCTTSCCHHHHHHH-HC
T ss_pred ------------cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCce-eeCCCCCcHHHHHHH-cc
Confidence 655 79999999999999999999999 899987 899999999999999 88
Q ss_pred C---------HHHHHHHHhcCCCCC
Q 042183 162 S---------SHMVVAILKNCTSVS 177 (179)
Q Consensus 162 ~---------~~~~~~Ll~~g~~~~ 177 (179)
+ .+++++|+++|++++
T Consensus 196 ~~~~~~~~~~~~~v~~Ll~~ga~~n 220 (273)
T 2pnn_A 196 DNTVDNTKFVTSMYNEILILGAKLH 220 (273)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcchhHHHHHHHHHHHHHHhhhhcc
Confidence 8 899999999997764
No 81
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.92 E-value=2.4e-24 Score=157.21 Aligned_cols=91 Identities=19% Similarity=0.283 Sum_probs=78.0
Q ss_pred cCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHH-hhcccCCchhhhhhHH
Q 042183 29 QIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIE-RAKLLQHEDEELESGM 107 (179)
Q Consensus 29 ~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~-~~~~~~~~~~~~~~~~ 107 (179)
...+|||.|+..|+.++++.|++ .+..++.+|..|.| |||+|+..|+.+++++|++ .|++++.
T Consensus 182 ~g~tpLh~A~~~g~~~~v~~Ll~------~gad~n~~d~~G~T-pLh~A~~~g~~~iv~~Ll~~~gad~~~--------- 245 (276)
T 4hbd_A 182 AGQTALMLAVSHGRVDVVKALLA------CEADVNVQDDDGST-ALMCACEHGHKEIAGLLLAVPSCDISL--------- 245 (276)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCC-HHHHHHHHTCHHHHHHHHTSTTCCTTC---------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh------CCCCCCCCCCCCCC-HHHHHHHCCCHHHHHHHHhcCCCCCcC---------
Confidence 35688999999999999988887 67778888889999 9999999999999999998 7887776
Q ss_pred HHhccCCCCcHHHHHHHcCCHHHHHHHHhcC
Q 042183 108 IRMMNKEKHTALHEAVFHKIVDVVKILTRED 138 (179)
Q Consensus 108 ~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~ 138 (179)
+|..|+||||+|+..|+.+++++|+++.
T Consensus 246 ---~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 246 ---TDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp ---CCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred ---cCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 8888999999999999999999988764
No 82
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.92 E-value=1.1e-24 Score=157.25 Aligned_cols=134 Identities=18% Similarity=0.136 Sum_probs=114.3
Q ss_pred ccCCHHHHHHH---HcCChHHHHHHHHHHHHhh-----CcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCc
Q 042183 28 LQIDPNLFKAA---AAGNLEPFKDMAREEILEI-----CPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHE 99 (179)
Q Consensus 28 ~~~~~~l~~A~---~~g~~~~~~~ll~~~~~~~-----~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~ 99 (179)
....++||.|+ ..|+.++++.|++...... ....++..|..|.| |||+|+..|+.+++++|+++|++++.
T Consensus 44 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t-~L~~A~~~g~~~~v~~Ll~~ga~~~~- 121 (260)
T 3jxi_A 44 STGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQT-ALHIAIERRCKHYVELLVEKGADVHA- 121 (260)
T ss_dssp TTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBC-HHHHHHHTTCHHHHHHHHHTTCCTTC-
T ss_pred CCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCC-HHHHHHHcCCHHHHHHHHhCCCCcCc-
Confidence 34679999999 7799999999998332100 11234455669999 99999999999999999999998877
Q ss_pred hhhhhhHHHHhcc--------------CCCCcHHHHHHHcCCHHHHHHHHh---cCCCCCCCCCCCCCCHHHHHHHhcCC
Q 042183 100 DEELESGMIRMMN--------------KEKHTALHEAVFHKIVDVVKILTR---EDLDYPYSANNYNKTPLCMVAEYEHS 162 (179)
Q Consensus 100 ~~~~~~~~~~~~~--------------~~g~t~l~~A~~~g~~~~~~~Ll~---~~~~~~~~~~~~g~tpl~~A~~~~~~ 162 (179)
++ ..|+||||+|+..|+.+++++|++ .|++++ .+|..|.||||+|+. .++
T Consensus 122 -----------~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~-~~d~~g~TpLh~A~~-~~~ 188 (260)
T 3jxi_A 122 -----------QARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLR-RQDSRGNTVLHALVA-IAD 188 (260)
T ss_dssp -----------CCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTT-CCCTTSCCHHHHHHH-HCC
T ss_pred -----------cccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCc-ccCCCCCcHHHHHHH-hcc
Confidence 66 579999999999999999999999 899987 899999999999998 877
Q ss_pred ---------HHHHHHHHhcCCCC
Q 042183 163 ---------SHMVVAILKNCTSV 176 (179)
Q Consensus 163 ---------~~~~~~Ll~~g~~~ 176 (179)
.+++++|+++|+++
T Consensus 189 ~~~~~~~~~~~~v~~Ll~~ga~~ 211 (260)
T 3jxi_A 189 NTRENTKFVTKMYDLLLIKCAKL 211 (260)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHhCccc
Confidence 79999999999765
No 83
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.92 E-value=1.4e-23 Score=149.04 Aligned_cols=127 Identities=17% Similarity=0.147 Sum_probs=92.2
Q ss_pred CHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHh
Q 042183 31 DPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRM 110 (179)
Q Consensus 31 ~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~ 110 (179)
.++|+.|+..|+.+.++.|++ .+..++..+..|.| |||+|+..|+.+++++|++++..... .
T Consensus 10 ~~~l~~A~~~g~~~~~~~Ll~------~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~~~~~~~-----------~ 71 (240)
T 3eu9_A 10 TWDIVKATQYGIYERCRELVE------AGYDVRQPDKENVT-LLHWAAINNRIDLVKYYISKGAIVDQ-----------L 71 (240)
T ss_dssp GCCHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTTC-----------C
T ss_pred chHHHHHHHcCChHHHHHHHH------cCCCcCCCCCCCCC-HHHHHHHhCCHHHHHHHHHcCCcchh-----------h
Confidence 356888888888888877776 45566777777888 88888888888888888887776554 1
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCC
Q 042183 111 MNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVS 177 (179)
Q Consensus 111 ~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~ 177 (179)
.+..|.||||+|+..|+.+++++|++.|+++. ..+..|.|||++|+. .|+.+++++|+++|++++
T Consensus 72 ~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~-~~~~~~~~~Ll~~~~~~~ 136 (240)
T 3eu9_A 72 GGDLNSTPLHWATRQGHLSMVVQLMKYGADPS-LIDGEGCSCIHLAAQ-FGHTSIVAYLIAKGQDVD 136 (240)
T ss_dssp BTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHH-TTCHHHHHHHHHTTCCTT
T ss_pred cCCcCCChhHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHH-cCHHHHHHHHHhcCCCcc
Confidence 23347777777777777777777777777765 667777777777777 777777777777776654
No 84
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=7.1e-24 Score=145.76 Aligned_cols=122 Identities=20% Similarity=0.213 Sum_probs=108.2
Q ss_pred cCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHH
Q 042183 29 QIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMI 108 (179)
Q Consensus 29 ~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~ 108 (179)
...++||.|+..|+.+.++.|++ +..++.+|..|.| |||+|+..|+.+++++|+++|++++.
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-------~~~~~~~d~~g~t-~L~~A~~~~~~~~v~~Ll~~ga~~~~---------- 104 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-------DRDVDAVDENGRT-ALLFVAGLGSDKCVRLLAEAGADLDH---------- 104 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-------TSCTTCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCTTC----------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-------cCCCCCcCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCCc----------
Confidence 34589999999999999988864 4577889999999 99999999999999999999998877
Q ss_pred Hhcc-CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhc----------------CCHHHHHHHHh
Q 042183 109 RMMN-KEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYE----------------HSSHMVVAILK 171 (179)
Q Consensus 109 ~~~~-~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~----------------~~~~~~~~Ll~ 171 (179)
++ ..|+||||+|+..|+.+++++|++.|++++ .+|..|.||||+|+. . |+.+++++|.+
T Consensus 105 --~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~-~~~~~~~~~~l~~a~~~~~~~i~~~L~~ 180 (183)
T 3deo_A 105 --RDMRGGLTALHMAAGYVRPEVVEALVELGADIE-VEDERGLTALELARE-ILKTTPKGNPMQFGRRIGLEKVINVLEG 180 (183)
T ss_dssp --CCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTT-CCCTTSCCHHHHHHH-HHHTCCCCSHHHHHHHHHHHHHHHHHHT
T ss_pred --CCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCc-CCCCCCCCHHHHHHH-hccCcccccHHHHHHHcCHHHHHHHHHH
Confidence 77 889999999999999999999999999986 899999999999987 5 56677777765
Q ss_pred c
Q 042183 172 N 172 (179)
Q Consensus 172 ~ 172 (179)
+
T Consensus 181 ~ 181 (183)
T 3deo_A 181 Q 181 (183)
T ss_dssp C
T ss_pred h
Confidence 4
No 85
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.91 E-value=2.1e-24 Score=154.93 Aligned_cols=123 Identities=20% Similarity=0.203 Sum_probs=111.4
Q ss_pred cCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHH
Q 042183 29 QIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMI 108 (179)
Q Consensus 29 ~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~ 108 (179)
...++||.|+..|+.+.++.|++ +..++.+|..|.| |||+|+..|+.+++++|+++|++++.
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-------~~~~~~~d~~g~t-~L~~A~~~g~~~~v~~Ll~~ga~~~~---------- 105 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-------DRDVDAVDENGRT-ALLFVAGLGSDKCVRLLAEAGADLDH---------- 105 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-------TCCTTCBCTTSCB-HHHHHHHHTCHHHHHHHHHTTCCTTC----------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-------CCCCCCcCCCCCC-HHHHHHHCCCHHHHHHHHHcCCCCCc----------
Confidence 44689999999999999988864 4577889999999 99999999999999999999998877
Q ss_pred Hhcc-CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHH----------------HhcCCHHHHHHHHh
Q 042183 109 RMMN-KEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVA----------------EYEHSSHMVVAILK 171 (179)
Q Consensus 109 ~~~~-~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~----------------~~~~~~~~~~~Ll~ 171 (179)
++ ..|+||||+|+..|+.+++++|++.|++++ ..|..|.||||+|+ . .|+.+++++|++
T Consensus 106 --~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~-~g~~~iv~~L~~ 181 (244)
T 3ui2_A 106 --RDMRGGLTALHMAAGYVRPEVVEALVELGADIE-VEDERGLTALELAREILKTTPKGNPMQFGRR-IGLEKVINVLEG 181 (244)
T ss_dssp --CCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHHHTTCCCSSHHHHHHH-HHHHHHHHHHHH
T ss_pred --CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCcHHHHHHHHHhccCCCCHHHHHHH-cChHHHHHHHHH
Confidence 77 789999999999999999999999999986 89999999999888 5 688999999998
Q ss_pred cC
Q 042183 172 NC 173 (179)
Q Consensus 172 ~g 173 (179)
++
T Consensus 182 ~~ 183 (244)
T 3ui2_A 182 QV 183 (244)
T ss_dssp HH
T ss_pred hc
Confidence 64
No 86
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.91 E-value=1.4e-23 Score=156.88 Aligned_cols=129 Identities=19% Similarity=0.208 Sum_probs=91.6
Q ss_pred CCHHHHHHHHcCChHHHHHHHHH--------------------------------HHHhhCcccccccCCCCCcHHHHHH
Q 042183 30 IDPNLFKAAAAGNLEPFKDMARE--------------------------------EILEICPSLLLQVNAKGDSRSLLVA 77 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~--------------------------------~~~~~~~~~~~~~~~~g~t~~L~~A 77 (179)
..+|||.|+..|+.++++.|+++ .++-..+..++.+|..|.| |||+|
T Consensus 168 g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t-~L~~a 246 (337)
T 4g8k_A 168 GATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKT-PLILA 246 (337)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCC-HHHHH
T ss_pred CCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCC-HHHHH
Confidence 45899999999999999999851 1122234445555666666 66666
Q ss_pred HHcCCHHHHHHHHHh-hcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHH
Q 042183 78 AKFGHCDIVSVLIER-AKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMV 156 (179)
Q Consensus 78 ~~~g~~~~v~~ll~~-~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A 156 (179)
+..|+.+++++|+.. +.+++. +|..|+||||+|+..|+.+++++|+++|++++ ..+||++|
T Consensus 247 ~~~~~~~~v~~Ll~~~~~~vn~------------~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n------~~~~L~~A 308 (337)
T 4g8k_A 247 VEKKHLGLVQRLLEQEHIEIND------------TDSDGKTALLLAVELKLKKIAELLCKRGASTD------CGDLVMTA 308 (337)
T ss_dssp HHTTCHHHHHHHHTSTTCCTTC------------BCTTSCBHHHHHHHTTCHHHHHHHHTTSCSST------TCCHHHHH
T ss_pred HHhhhhHHHHHHHHhcCCcccC------------cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC------CCCHHHHH
Confidence 666666666666653 444444 77888888888888888888888888887753 34688888
Q ss_pred HHhcCCHHHHHHHHhcCCCCCC
Q 042183 157 AEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 157 ~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
+. +|+.+++++|+++|+++++
T Consensus 309 ~~-~~~~~iv~~Ll~~GA~~d~ 329 (337)
T 4g8k_A 309 RR-NYDHSLVKVLLSHGAKEDF 329 (337)
T ss_dssp HH-TTCHHHHHHHHHTTCCC--
T ss_pred HH-cCCHHHHHHHHHCcCCCCC
Confidence 88 8888888888888888764
No 87
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.91 E-value=1.1e-23 Score=159.14 Aligned_cols=122 Identities=15% Similarity=0.190 Sum_probs=114.6
Q ss_pred CHHHHHHHHc-CChHHHHHHHHHHHHhhCcccccccC--CCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHH
Q 042183 31 DPNLFKAAAA-GNLEPFKDMAREEILEICPSLLLQVN--AKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGM 107 (179)
Q Consensus 31 ~~~l~~A~~~-g~~~~~~~ll~~~~~~~~~~~~~~~~--~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~ 107 (179)
.++||.|+.. |+++.++.|++ .+..++..+ ..|.| |||+|+..|+.+++++|+++|++++.
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~------~Gadvn~~~~~~~g~T-pLh~Aa~~g~~~iv~~LL~~Gadvn~--------- 263 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALA------HGADVNWVNGGQDNAT-PLIQATAANSLLACEFLLQNGANVNQ--------- 263 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHH------TTCCTTCCCTTTTCCC-HHHHHHHTTCHHHHHHHHHTTCCTTC---------
T ss_pred CcHHHHHHHccCCHHHHHHHHH------cCCCCCccccccCCCC-HHHHHHHCCCHHHHHHHHHcCCCCCC---------
Confidence 4689999999 99999999987 667778777 89999 99999999999999999999998887
Q ss_pred HHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcC
Q 042183 108 IRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNC 173 (179)
Q Consensus 108 ~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g 173 (179)
+|..|+||||+|+..|+.+++++|++.|++++ ..|..|.||||+|+. .|+.+++++|+..+
T Consensus 264 ---~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~-~~d~~G~TpL~~A~~-~g~~~iv~lLl~~~ 324 (368)
T 3jue_A 264 ---ADSAGRGPLHHATILGHTGLACLFLKRGADLG-ARDSEGRDPLTIAME-TANADIVTLLRLAK 324 (368)
T ss_dssp ---CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHH-TTCHHHHHHHHHHH
T ss_pred ---CCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCC-CcCCCCCCHHHHHHH-CCCHHHHHHHHHcC
Confidence 99999999999999999999999999999986 899999999999999 99999999999876
No 88
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.91 E-value=3.3e-24 Score=147.99 Aligned_cols=124 Identities=10% Similarity=0.081 Sum_probs=111.2
Q ss_pred cCCHHHHHHHHcCChH----HHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCC------HHHHHHHHHhhcccCC
Q 042183 29 QIDPNLFKAAAAGNLE----PFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGH------CDIVSVLIERAKLLQH 98 (179)
Q Consensus 29 ~~~~~l~~A~~~g~~~----~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~------~~~v~~ll~~~~~~~~ 98 (179)
...+|||.|+..|+.+ +++.|++ .+..++.+|..|+| |||+|+..|+ .+++++|+++|++++.
T Consensus 37 ~g~T~Lh~A~~~~~~~~~~~iv~~Ll~------~Gadvn~~d~~g~T-pLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~ 109 (186)
T 3t8k_A 37 LKSNILYDVLRNNNDEARYKISMFLIN------KGADIKSRTKEGTT-LFFPLFQGGGNDITGTTELCKIFLEKGADITA 109 (186)
T ss_dssp HTTTHHHHHTTCSCHHHHHHHHHHHHH------TTCCSSCCCTTCCC-THHHHHHHCTTCHHHHHHHHHHHHHTTCCSSS
T ss_pred CCCCHHHHHHHcCCcchHHHHHHHHHH------CCCCCCCCCCCCCc-HHHHHHHcCCcchhhHHHHHHHHHHCCCCCCc
Confidence 3578999999999864 7888877 78899999999999 9999999987 5789999999999988
Q ss_pred chhhhhhHHHHhccCCCC-cHHHHHHHcCC-----HHHHHHHHh-cCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHh
Q 042183 99 EDEELESGMIRMMNKEKH-TALHEAVFHKI-----VDVVKILTR-EDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILK 171 (179)
Q Consensus 99 ~~~~~~~~~~~~~~~~g~-t~l~~A~~~g~-----~~~~~~Ll~-~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~ 171 (179)
+|..|+ ||||+|+..+. .+++++|++ .|++++ .+|..|.||||+|+. .|+.+++++|.+
T Consensus 110 ------------~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~-~~d~~G~TpL~~A~~-~~~~~~v~~L~~ 175 (186)
T 3t8k_A 110 ------------LYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLL-IKDKWGLTALEFVKR-CQKPIALKMMED 175 (186)
T ss_dssp ------------CBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTT-CCCTTSCCHHHHHHT-TTCHHHHHHHHH
T ss_pred ------------cCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCc-ccCCCCCCHHHHHHH-cCCHHHHHHHHH
Confidence 999999 99999999554 569999999 899987 899999999999999 999999999987
Q ss_pred cC
Q 042183 172 NC 173 (179)
Q Consensus 172 ~g 173 (179)
..
T Consensus 176 ~~ 177 (186)
T 3t8k_A 176 YI 177 (186)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 89
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.90 E-value=3.3e-23 Score=135.93 Aligned_cols=100 Identities=23% Similarity=0.248 Sum_probs=94.7
Q ss_pred ccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCC
Q 042183 64 QVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPY 143 (179)
Q Consensus 64 ~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~ 143 (179)
.+|..|.| |||+|+..|+.+++++|++.+.+++. ++..|+||||+|+..|+.+++++|++.|++++
T Consensus 5 ~~~~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~~~------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~- 70 (137)
T 3c5r_A 5 FTNHRGET-LLHIASIKGDIPSVEYLLQNGSDPNV------------KDHAGWTPLHEACNHGHLKVVELLLQHKALVN- 70 (137)
T ss_dssp CCCTTCCC-HHHHHHHHTCHHHHHHHHHTTCCSCC------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-
T ss_pred CcCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCCc------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCccc-
Confidence 57889999 99999999999999999999998877 89999999999999999999999999999976
Q ss_pred CCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 144 SANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 144 ~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
..|..|.||||+|+. .|+.+++++|+++|++++.
T Consensus 71 ~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~ga~~~~ 104 (137)
T 3c5r_A 71 TTGYQNDSPLHDAAK-NGHVDIVKLLLSYGASRNA 104 (137)
T ss_dssp CCCGGGCCHHHHHHH-TTCHHHHHHHHHTTCCTTC
T ss_pred CcCCCCCCHHHHHHH-cCCHHHHHHHHHcCCCCCC
Confidence 889999999999999 9999999999999998764
No 90
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.90 E-value=1.9e-24 Score=149.18 Aligned_cols=125 Identities=14% Similarity=0.071 Sum_probs=109.0
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhhCcccccccC-CCCCcHHHHHHHHcCCH----HHHHHHHHhhcccCCchhhhhhH
Q 042183 32 PNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVN-AKGDSRSLLVAAKFGHC----DIVSVLIERAKLLQHEDEELESG 106 (179)
Q Consensus 32 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-~~g~t~~L~~A~~~g~~----~~v~~ll~~~~~~~~~~~~~~~~ 106 (179)
++|+.|++.|+.+.++.++. .. ++..+ ..|.| |||+|+.+|+. +++++|+++|++++.
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~-----~~---~~~~~~~~g~T-~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~-------- 70 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFE-----KG---YEDKESVLKSN-ILYDVLRNNNDEARYKISMFLINKGADIKS-------- 70 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHH-----HS---SSCHHHHHTTT-HHHHHTTCSCHHHHHHHHHHHHHTTCCSSC--------
T ss_pred cHHHHHHHcCCHHHHHHHHh-----cC---cccccccCCCC-HHHHHHHcCCcchHHHHHHHHHHCCCCCCC--------
Confidence 45999999999999988876 22 24445 77999 99999999975 599999999999988
Q ss_pred HHHhccCCCCcHHHHHHHcCC------HHHHHHHHhcCCCCCCCCCCCCC-CHHHHHHHhcCC-----HHHHHHHHh-cC
Q 042183 107 MIRMMNKEKHTALHEAVFHKI------VDVVKILTREDLDYPYSANNYNK-TPLCMVAEYEHS-----SHMVVAILK-NC 173 (179)
Q Consensus 107 ~~~~~~~~g~t~l~~A~~~g~------~~~~~~Ll~~~~~~~~~~~~~g~-tpl~~A~~~~~~-----~~~~~~Ll~-~g 173 (179)
++..|+||||+|+..|+ .+++++|++.|++++ .+|..|. ||||+|+. .+. .+++++|++ +|
T Consensus 71 ----~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin-~~d~~g~ttpLh~A~~-~~~~~~~~~~iv~~Ll~~~g 144 (186)
T 3t8k_A 71 ----RTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADIT-ALYKPYKIVVFKNIFN-YFVDENEMIPLYKLIFSQSG 144 (186)
T ss_dssp ----CCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSS-SCBGGGTBCTTGGGGG-CCSCHHHHHHHHHHHHTSTT
T ss_pred ----CCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCC-ccCCCcCchHHHHHHH-cCCChhhHHHHHHHHHHhcC
Confidence 99999999999999997 578999999999987 8999999 99999998 765 458999999 99
Q ss_pred CCCCCC
Q 042183 174 TSVSHR 179 (179)
Q Consensus 174 ~~~~~r 179 (179)
++++.+
T Consensus 145 ad~~~~ 150 (186)
T 3t8k_A 145 LQLLIK 150 (186)
T ss_dssp CCTTCC
T ss_pred CCCccc
Confidence 998753
No 91
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.90 E-value=3.5e-23 Score=156.97 Aligned_cols=141 Identities=13% Similarity=0.157 Sum_probs=81.1
Q ss_pred cCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcC---CHHHHHHHHHhhcccCCchh----
Q 042183 29 QIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFG---HCDIVSVLIERAKLLQHEDE---- 101 (179)
Q Consensus 29 ~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g---~~~~v~~ll~~~~~~~~~~~---- 101 (179)
...++||.|+..|+.++++.|++... .+..++..|..|.| |||+|+..+ +.+++++|+++|++++....
T Consensus 198 ~g~t~L~~A~~~g~~~~v~~Ll~~~~---~~~~~~~~d~~g~t-~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~ 273 (373)
T 2fo1_E 198 SERSALHQAAANRDFGMMVYMLNSTK---LKGDIEELDRNGMT-ALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKD 273 (373)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHTTSHH---HHHTTSCCCTTSCC-HHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTS
T ss_pred CCCCHHHHHHHCCCHHHHHHHHhcCc---cccChhhcCCCCCC-HHHHHHHhCCcchHHHHHHHHHCCCCcccccccccC
Confidence 34466666666666666666665110 11344555555555 566555555 55555555555555442100
Q ss_pred -------h----------------h--h-hHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHH
Q 042183 102 -------E----------------L--E-SGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCM 155 (179)
Q Consensus 102 -------~----------------~--~-~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~ 155 (179)
+ + . ...++.+|..|+||||+|+..|+.+++++|++.|++++ ..|..|.|||++
T Consensus 274 ~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~-~~d~~g~t~l~~ 352 (373)
T 2fo1_E 274 SEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVE-AVDATDHTARQL 352 (373)
T ss_dssp SSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS-CCCSSSCCHHHH
T ss_pred cccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-CCCCCCCCHHHH
Confidence 0 0 0 01222366667777777777777777777777777755 666777777777
Q ss_pred HHHhcCCHHHHHHHHhcCCC
Q 042183 156 VAEYEHSSHMVVAILKNCTS 175 (179)
Q Consensus 156 A~~~~~~~~~~~~Ll~~g~~ 175 (179)
|+. +|+.+++++|++++++
T Consensus 353 A~~-~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 353 AQA-NNHHNIVDIFDRCRPE 371 (373)
T ss_dssp HHH-TTCHHHHHHHHTTC--
T ss_pred HHH-cCCHHHHHHHHhcCcc
Confidence 777 7777777777776654
No 92
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.90 E-value=3.4e-23 Score=157.01 Aligned_cols=143 Identities=18% Similarity=0.161 Sum_probs=119.2
Q ss_pred cccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhh---cccCCchhh-
Q 042183 27 QLQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERA---KLLQHEDEE- 102 (179)
Q Consensus 27 ~~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~---~~~~~~~~~- 102 (179)
.....+|||.|+..|+.++++.|++ .+..++..+..|.| |||+|+..|+.+++++|++++ .+.+.....
T Consensus 163 d~~g~TpL~~A~~~g~~~iv~~Ll~------~ga~~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g 235 (373)
T 2fo1_E 163 DCDENTPLMLAVLARRRRLVAYLMK------AGADPTIYNKSERS-ALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNG 235 (373)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHH------TTCCSCCCCTTCCC-HHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTS
T ss_pred CCCCCCHHHHHHHcChHHHHHHHHH------CCCCCcccCCCCCC-HHHHHHHCCCHHHHHHHHhcCccccChhhcCCCC
Confidence 4456799999999999999999998 67788899999999 999999999999999999987 344332111
Q ss_pred -----------------------hhhHHHH--------hccCCCCcHHHHHHHcCCHHHHHHHHhcC-CCCCCCCCCCCC
Q 042183 103 -----------------------LESGMIR--------MMNKEKHTALHEAVFHKIVDVVKILTRED-LDYPYSANNYNK 150 (179)
Q Consensus 103 -----------------------~~~~~~~--------~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~-~~~~~~~~~~g~ 150 (179)
..+..++ ..+..|+||||+|+..|+.+++++|++.+ ++++ ..|..|.
T Consensus 236 ~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n-~~d~~g~ 314 (373)
T 2fo1_E 236 MTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKD-KQDEDGK 314 (373)
T ss_dssp CCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTT-CCCTTCC
T ss_pred CCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCcc-CcCCCCC
Confidence 0000111 14557999999999999999999999886 7766 8999999
Q ss_pred CHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 151 TPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 151 tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
||||+|+. .|+.+++++|+++|++++.
T Consensus 315 TpL~~A~~-~g~~~iv~~Ll~~gad~~~ 341 (373)
T 2fo1_E 315 TPIMLAAQ-EGRIEVVMYLIQQGASVEA 341 (373)
T ss_dssp CHHHHHHH-HTCHHHHHHHHHTTCCSSC
T ss_pred CHHHHHHH-cCCHHHHHHHHHcCCCccC
Confidence 99999999 9999999999999998864
No 93
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.90 E-value=8.8e-23 Score=144.96 Aligned_cols=138 Identities=21% Similarity=0.270 Sum_probs=93.4
Q ss_pred CHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhh--------
Q 042183 31 DPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEE-------- 102 (179)
Q Consensus 31 ~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~-------- 102 (179)
.++||.|+..|+.++++.|++ .+..++..+..|.| |||+|+..|+.+++++|++++.+++.....
T Consensus 77 ~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t-~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a 149 (240)
T 3eu9_A 77 STPLHWATRQGHLSMVVQLMK------YGADPSLIDGEGCS-CIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWA 149 (240)
T ss_dssp BCHHHHHHHHTCHHHHHHHHH------TTCCTTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CChhHHHHHcCCHHHHHHHHH------cCCCCcccCCCCCC-HHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHH
Confidence 356666666666666666655 45566677777888 888888888888888888877766542211
Q ss_pred --------------hhhHHHHhccC-CCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHH
Q 042183 103 --------------LESGMIRMMNK-EKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVV 167 (179)
Q Consensus 103 --------------~~~~~~~~~~~-~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ 167 (179)
..+..++..+. .|.||||+|+..|+.+++++|++.|+++. ..+..|.|||++|+. .|+.++++
T Consensus 150 ~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~-~~~~~~v~ 227 (240)
T 3eu9_A 150 AYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVD-AQNIKGESALDLAKQ-RKNVWMIN 227 (240)
T ss_dssp HHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT-CBCTTSCBHHHHHHH-TTCHHHHH
T ss_pred HHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHH-cCcHHHHH
Confidence 11112233443 67788888888888888888888887765 777778888888888 88888888
Q ss_pred HHHhcCCCCC
Q 042183 168 AILKNCTSVS 177 (179)
Q Consensus 168 ~Ll~~g~~~~ 177 (179)
+|++++++..
T Consensus 228 ~L~~~~~~~~ 237 (240)
T 3eu9_A 228 HLQEARQAKG 237 (240)
T ss_dssp HHHHHC----
T ss_pred HHHHhhhccC
Confidence 8888776543
No 94
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.90 E-value=1.5e-23 Score=137.53 Aligned_cols=103 Identities=16% Similarity=0.161 Sum_probs=96.6
Q ss_pred ccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCC
Q 042183 60 SLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDL 139 (179)
Q Consensus 60 ~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~ 139 (179)
..++..+..|.| |||+|+..|+.+++++|++++.+++. ++..|+||||+|+. |+.+++++|++.|+
T Consensus 3 ~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~------------~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~ 68 (136)
T 1d9s_A 3 PGIHMLGGSSDA-GLATAAARGQVETVRQLLEAGADPNA------------LNRFGRRPIQVMMM-GSAQVAELLLLHGA 68 (136)
T ss_dssp CCCSCCCCCCSC-HHHHHHHTTCHHHHHHHHHTTCCTTC------------CCTTCCTTTTTSTT-SCHHHHHHHHHHTC
T ss_pred CCccCCCCCCcc-HHHHHHHcCCHHHHHHHHHcCCCcCC------------cCCCCCCHHHHHHc-CCHHHHHHHHHCCC
Confidence 456788999999 99999999999999999999998877 89999999999999 99999999999999
Q ss_pred CCCCCCCCC-CCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 140 DYPYSANNY-NKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 140 ~~~~~~~~~-g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
+++ ..+.. |.||||+|+. .|+.+++++|+++|++++.
T Consensus 69 ~~~-~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~ga~~~~ 106 (136)
T 1d9s_A 69 EPN-CADPATLTRPVHDAAR-EGFLDTLVVLHRAGARLDV 106 (136)
T ss_dssp CSS-CCBTTTTBCHHHHHHH-HTCHHHHHHHHHTCCCCCC
T ss_pred CCC-CcCCCCCCCHHHHHHH-cCCHHHHHHHHHcCCCCCc
Confidence 986 88888 9999999999 9999999999999998864
No 95
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.90 E-value=7.9e-23 Score=131.73 Aligned_cols=98 Identities=17% Similarity=0.170 Sum_probs=90.2
Q ss_pred CCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCC
Q 042183 66 NAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSA 145 (179)
Q Consensus 66 ~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~ 145 (179)
+..|.+ |||+|+..|+.+++++|++.+.+++. ++..|+||||+|+..|+.+++++|++.|++++ ..
T Consensus 4 ~~~~~~-~l~~A~~~~~~~~v~~ll~~~~~~~~------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~ 69 (123)
T 3aaa_C 4 GSMCDK-EFMWALKNGDLDEVKDYVAKGEDVNR------------TLEGGRKPLHYAADCGQLEILEFLLLKGADIN-AP 69 (123)
T ss_dssp ---CHH-HHHHHHHTTCHHHHHHHHHTTCCTTS------------CCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTT-CC
T ss_pred ccccch-HHHHHHHcCCHHHHHHHHHcCCCcCc------------cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-cC
Confidence 456788 99999999999999999999988777 89999999999999999999999999999976 89
Q ss_pred CCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 146 NNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 146 ~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
|..|.||||+|+. .|+.+++++|+++|++++.
T Consensus 70 d~~g~tpL~~A~~-~~~~~~v~~Ll~~ga~~~~ 101 (123)
T 3aaa_C 70 DKHHITPLLSAVY-EGHVSCVKLLLSKGADKTV 101 (123)
T ss_dssp CTTSCCHHHHHHH-HTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCHHHHHHH-cCCHHHHHHHHHcCCCCCC
Confidence 9999999999999 9999999999999998764
No 96
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.89 E-value=1.4e-23 Score=133.74 Aligned_cols=99 Identities=22% Similarity=0.274 Sum_probs=92.2
Q ss_pred ccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCC
Q 042183 64 QVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPY 143 (179)
Q Consensus 64 ~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~ 143 (179)
.+|..|.| |||+|+..|+.+++++|++++.+++. ++..|+||||+|+..|+.+++++|++.|++++
T Consensus 4 ~~d~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~~~------------~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~- 69 (115)
T 2l6b_A 4 WGSKDGNT-PLHNAAKNGHAEEVKKLLSKGADVNA------------RSKDGNTPLHLAAKNGHAEIVKLLLAKGADVN- 69 (115)
T ss_dssp CCSCSSCC-HHHHHHHHTCHHHHHHHTTTTCCSSC------------CCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTT-
T ss_pred ccCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCCC------------cCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCc-
Confidence 57889999 99999999999999999999988777 88999999999999999999999999999976
Q ss_pred CCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCC
Q 042183 144 SANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVS 177 (179)
Q Consensus 144 ~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~ 177 (179)
..|..|.|||++|+. .++.+++++|+++|++++
T Consensus 70 ~~d~~g~tpl~~A~~-~~~~~~~~~Ll~~ga~~n 102 (115)
T 2l6b_A 70 ARSKDGNTPEHLAKK-NGHHEIVKLLDAKGADVN 102 (115)
T ss_dssp CCCTTCCCTTHHHHT-TTCHHHHHHHHTTSSSHH
T ss_pred ccCCCCCCHHHHHHH-CCCHHHHHHHHHcCCCCC
Confidence 889999999999999 999999999999998864
No 97
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.88 E-value=2.6e-22 Score=142.75 Aligned_cols=106 Identities=21% Similarity=0.213 Sum_probs=96.2
Q ss_pred CcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhc
Q 042183 58 CPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTRE 137 (179)
Q Consensus 58 ~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~ 137 (179)
.+...+..+..|.| |||+|+..|+.+++++|++.|++++. ++..|+||||+|+..|+.+++++|++.
T Consensus 10 ~~~~~~~~~~~~~t-~L~~A~~~g~~~~v~~Ll~~g~~~~~------------~d~~g~tpLh~A~~~g~~~~v~~Ll~~ 76 (229)
T 2vge_A 10 SPRKARRARLNPLV-LLLDAALTGELEVVQQAVKEMNDPSQ------------PNEEGITALHNAICGANYSIVDFLITA 76 (229)
T ss_dssp CCCCCCCTTSCHHH-HHHHHHHHTCHHHHHHHHHHSSCTTC------------CCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCccccccccchhH-HHHHHHHcCCHHHHHHHHhcCCCCCC------------CCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 34444556667778 99999999999999999999998877 999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 138 DLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 138 ~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
|++++ ..|..|.||||+|+. .|+.+++++|+++|++++.
T Consensus 77 ga~~n-~~d~~g~tpLh~A~~-~g~~~~v~~Ll~~ga~~~~ 115 (229)
T 2vge_A 77 GANVN-SPDSHGWTPLHCAAS-CNDTVICMALVQHGAAIFA 115 (229)
T ss_dssp TCCTT-CCCTTCCCHHHHHHH-TTCHHHHHHHHTTTCCTTC
T ss_pred CCCCC-CCCCCCCCHHHHHHH-cCCHHHHHHHHHcCCCccc
Confidence 99987 889999999999999 9999999999999998764
No 98
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.88 E-value=5.9e-22 Score=121.59 Aligned_cols=92 Identities=27% Similarity=0.309 Sum_probs=85.8
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHH
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIR 109 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~ 109 (179)
..+|||.|+..|+.++++.|++ .+..++.+|..|.| |||+|+..|+.+++++|+++|++++.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~------~g~~~n~~d~~g~t-~L~~A~~~~~~~~v~~Ll~~ga~~~~----------- 63 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLE------AGADVNAKDKNGRT-PLHLAARNGHLEVVKLLLEAGADVNA----------- 63 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHH------TTCCTTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTTC-----------
T ss_pred CCcHHHHHHHcCCHHHHHHHHH------cCCCCcccCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCCc-----------
Confidence 3578999999999999999987 67788999999999 99999999999999999999998887
Q ss_pred hccCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Q 042183 110 MMNKEKHTALHEAVFHKIVDVVKILTREDLD 140 (179)
Q Consensus 110 ~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~ 140 (179)
+|..|+||||+|+..|+.+++++|++.|++
T Consensus 64 -~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 64 -KDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp -CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred -cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999874
No 99
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.88 E-value=4.1e-22 Score=130.61 Aligned_cols=99 Identities=22% Similarity=0.241 Sum_probs=91.1
Q ss_pred cCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCC
Q 042183 65 VNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYS 144 (179)
Q Consensus 65 ~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~ 144 (179)
....+.| |||+|+..|+.+++++|++++.+++. ++..|+||||+|+..|+.+++++|++.|++++ .
T Consensus 10 ~~~~~~t-~l~~A~~~g~~~~v~~Ll~~g~~~~~------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~ 75 (136)
T 2jab_A 10 HGSDLGK-KLLEAARAGQDDEVRILMANGADVNA------------KDEYGLTPLYLATAHGHLEIVEVLLKNGADVN-A 75 (136)
T ss_dssp --CHHHH-HHHHHHHHTCHHHHHHHHHTTCCTTC------------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-C
T ss_pred ccccccH-HHHHHHHhCCHHHHHHHHHcCCCCCC------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-c
Confidence 4456778 99999999999999999999998877 89999999999999999999999999999986 8
Q ss_pred CCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 145 ANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 145 ~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
.|..|.||||+|+. .|+.+++++|+++|++++.
T Consensus 76 ~d~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~~~~ 108 (136)
T 2jab_A 76 VDAIGFTPLHLAAF-IGHLEIAEVLLKHGADVNA 108 (136)
T ss_dssp CCTTCCCHHHHHHH-HTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCCHHHHHHH-cCCHHHHHHHHHcCCCCcC
Confidence 89999999999999 9999999999999998753
No 100
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.87 E-value=3.1e-21 Score=124.12 Aligned_cols=96 Identities=27% Similarity=0.399 Sum_probs=90.3
Q ss_pred CCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC
Q 042183 68 KGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANN 147 (179)
Q Consensus 68 ~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~ 147 (179)
+|.| |||+|+..|+.+++++|++++.+++. .+..|.||||+|+..|+.+++++|++.|+++. ..+.
T Consensus 1 ~g~t-~L~~A~~~~~~~~v~~Ll~~~~~~~~------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~ 66 (126)
T 1n0r_A 1 NGRT-PLHLAARNGHLEVVKLLLEAGADVNA------------KDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-AKDK 66 (126)
T ss_dssp CCCC-HHHHHHHHTCHHHHHHHHHHTCCTTC------------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCT
T ss_pred CCcc-HHHHHHHcCcHHHHHHHHHcCCCCCC------------cCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCc-ccCC
Confidence 4889 99999999999999999999988777 88999999999999999999999999999976 8899
Q ss_pred CCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 148 YNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 148 ~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
.|.||||+|+. .|+.+++++|+++|++++.
T Consensus 67 ~g~t~l~~A~~-~~~~~~~~~Ll~~g~~~~~ 96 (126)
T 1n0r_A 67 NGRTPLHLAAR-NGHLEVVKLLLEAGADVNA 96 (126)
T ss_dssp TSCCHHHHHHH-TTCHHHHHHHHHTTCCTTC
T ss_pred CCCcHHHHHHH-cChHHHHHHHHHcCCCCcc
Confidence 99999999999 9999999999999988754
No 101
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.87 E-value=8.1e-22 Score=139.21 Aligned_cols=101 Identities=20% Similarity=0.181 Sum_probs=93.8
Q ss_pred cccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhc-CCCC
Q 042183 63 LQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTRE-DLDY 141 (179)
Q Consensus 63 ~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~-~~~~ 141 (179)
+..+..|.| |||+|+..|+.+++++|++.+.+++. ++..|+||||+|+..|+.+++++|++. |+++
T Consensus 67 ~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~g~~~~~------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~ 133 (222)
T 3ehr_A 67 AEQAESIDN-PLHEAAKRGNLSWLRECLDNRVGVNG------------LDKAGSTALYWACHGGHKDIVEMLFTQPNIEL 133 (222)
T ss_dssp HHHEEEESC-HHHHHHHHTCHHHHHHHHHTTCCTTC------------CCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC
T ss_pred ccccccccc-ccccccccCcHHHHHHHHhCCCCccc------------cCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc
Confidence 335667899 99999999999999999999998877 899999999999999999999999999 8887
Q ss_pred CCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 142 PYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 142 ~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
+ ..|..|.||||+|+. .|+.+++++|+++|++++.
T Consensus 134 ~-~~d~~g~tpL~~A~~-~~~~~~v~~Ll~~ga~~~~ 168 (222)
T 3ehr_A 134 N-QQNKLGDTALHAAAW-KGYADIVQLLLAKGARTDL 168 (222)
T ss_dssp C-CCCTTSCCHHHHHHH-HTCHHHHHHHHHHTCCSCC
T ss_pred c-ccCCCCCCHHHHHHH-cCCHHHHHHHHHcCCCCcc
Confidence 6 899999999999999 9999999999999998864
No 102
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.86 E-value=2e-21 Score=122.93 Aligned_cols=94 Identities=21% Similarity=0.272 Sum_probs=83.7
Q ss_pred cccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Q 042183 61 LLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLD 140 (179)
Q Consensus 61 ~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~ 140 (179)
.....+.+|.+ +||+|+..|+.+++++|++++++++. +|..|+||||+|+..|+.+++++|++.|++
T Consensus 16 ~~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~g~~i~~------------~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~ 82 (110)
T 2zgd_A 16 RGSHMGSDLGK-KLLEAARAGQDDEVRILMANGADVAA------------KDKNGSTPLHLAARNGHLEVVKLLLEAGAD 82 (110)
T ss_dssp ------CCHHH-HHHHHHHHTCHHHHHHHHHTTCCTTC------------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred cccccCCccch-HHHHHHHcCCHHHHHHHHHcCCCCCc------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 44567889999 99999999999999999999998877 899999999999999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHhcCCHHHHHHH
Q 042183 141 YPYSANNYNKTPLCMVAEYEHSSHMVVAI 169 (179)
Q Consensus 141 ~~~~~~~~g~tpl~~A~~~~~~~~~~~~L 169 (179)
++ .+|..|.||||+|+. .|+.+++++|
T Consensus 83 ~~-~~d~~g~tpl~~A~~-~~~~~~~~~L 109 (110)
T 2zgd_A 83 VX-AQDKFGKTAFDISID-NGNEDLAEIL 109 (110)
T ss_dssp TT-CCCTTSCCHHHHHHH-HTCHHHHHHH
T ss_pred cc-ccccCCCcHHHHHHH-cCCHHHHHHh
Confidence 76 899999999999999 9999999987
No 103
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.86 E-value=1.2e-21 Score=131.16 Aligned_cols=100 Identities=16% Similarity=0.090 Sum_probs=90.6
Q ss_pred cccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCC
Q 042183 63 LQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYP 142 (179)
Q Consensus 63 ~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~ 142 (179)
...+..|.| |||+|+..|+.+++++|+++|.+++. ++..|+||||+|+ .|+.+++++|++.|++++
T Consensus 6 ~~~~~~~~t-~L~~A~~~g~~~~v~~Ll~~g~~~~~------------~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~ 71 (156)
T 1bi7_B 6 GSSMEPSAD-WLATAAARGRVEEVRALLEAGANPNA------------PNSYGRRPIQVMM-MGSARVAELLLLHGAEPN 71 (156)
T ss_dssp ----CCSTT-HHHHHHHHTCHHHHHHHHTTTCCTTC------------CCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCC
T ss_pred cCCCccchH-HHHHHHHcCCHHHHHHHHHcCCCCCC------------CCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCC
Confidence 446778999 99999999999999999999998877 8999999999985 999999999999999987
Q ss_pred CCCCCCCCC-HHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 143 YSANNYNKT-PLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 143 ~~~~~~g~t-pl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
..+..|.| |||+|+. .|+.+++++|+++|++++.
T Consensus 72 -~~d~~g~ttpL~~A~~-~~~~~~v~~Ll~~ga~~~~ 106 (156)
T 1bi7_B 72 -CADPATLTRPVHDAAR-EGFLDTLVVLHRAGARLDV 106 (156)
T ss_dssp -CCCTTTCCCHHHHHHH-HTCHHHHHHHHHHTCCSSC
T ss_pred -CcCCCCCcHHHHHHHH-CCCHHHHHHHHHcCCCCcc
Confidence 89999999 9999999 9999999999999998864
No 104
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.85 E-value=1.5e-21 Score=134.09 Aligned_cols=98 Identities=18% Similarity=0.149 Sum_probs=90.3
Q ss_pred cCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCC
Q 042183 65 VNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYS 144 (179)
Q Consensus 65 ~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~ 144 (179)
.+..|.| |||+|+..|+.+++++|++ +.+++. ++..|+||||+|+..|+.+++++|++.|++++ .
T Consensus 40 ~~~~g~t-~L~~A~~~g~~~~v~~Ll~-~~~~~~------------~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~ 104 (183)
T 3deo_A 40 VVSEYET-PWWTAARKADEQALSQLLE-DRDVDA------------VDENGRTALLFVAGLGSDKCVRLLAEAGADLD-H 104 (183)
T ss_dssp HHHHHHH-HHHHHHHTTCHHHHHHHTT-TSCTTC------------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-C
T ss_pred CCCCCCC-HHHHHHHcCCHHHHHHHHh-cCCCCC------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-c
Confidence 3557889 9999999999999999999 887776 89999999999999999999999999999987 5
Q ss_pred CC-CCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 145 AN-NYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 145 ~~-~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
.+ ..|.||||+|+. .|+.+++++|+++|++++.
T Consensus 105 ~~~~~g~tpL~~A~~-~~~~~~v~~Ll~~ga~~~~ 138 (183)
T 3deo_A 105 RDMRGGLTALHMAAG-YVRPEVVEALVELGADIEV 138 (183)
T ss_dssp CCSSSSCCHHHHHHH-TTCHHHHHHHHHHTCCTTC
T ss_pred CCCCCCCCHHHHHHh-cCcHHHHHHHHHcCCCCcC
Confidence 66 889999999999 9999999999999998864
No 105
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.85 E-value=9.5e-23 Score=154.53 Aligned_cols=128 Identities=15% Similarity=0.088 Sum_probs=101.0
Q ss_pred CHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHh
Q 042183 31 DPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRM 110 (179)
Q Consensus 31 ~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~ 110 (179)
.++||.|++.|+.++++.|++... ........+..|.| |||+|+.+|+.+++++|+++|++... .+.
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga---~~~~~~~~~~~~~t-pL~~Aa~~G~~eiv~~Ll~~gad~~~---------~~i 159 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLT---SDEIVKVIQAENYQ-AFRLAAENGHLHVLNRLCELAPTEIM---------AMI 159 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC-----CCSSCC--CHHHHH-HHHHHHHTTCHHHHHHHHHSCTTTHH---------HHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCC---cHHHHHHhccCCCC-HHHHHHHcCCHHHHHHHHhCCCCccc---------ccc
Confidence 389999999999999999987111 11112245567888 99999999999999999999863210 111
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCC--CCCCCCCHHHHHH-HhcCCHHHHHHHHhcCC
Q 042183 111 MNKEKHTALHEAVFHKIVDVVKILTREDLDYPYS--ANNYNKTPLCMVA-EYEHSSHMVVAILKNCT 174 (179)
Q Consensus 111 ~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~--~~~~g~tpl~~A~-~~~~~~~~~~~Ll~~g~ 174 (179)
.+.+ +||||+|+..|+.+++++|++.|+++. . .|..|.||||+|+ . .|+.+++++|+++|+
T Consensus 160 ~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~-~~~~d~~g~TpL~~Aa~~-~G~~eiv~~Ll~~ga 223 (376)
T 2aja_A 160 QAEN-YHAFRLAAENGHLHVLNRLCELAPTEA-TAMIQAENYYAFRWAAVG-RGHHNVINFLLDCPV 223 (376)
T ss_dssp SHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGH-HHHHHHHHHHHHHHHHST-TCCHHHHHHHTTSHH
T ss_pred CCCC-CCHHHHHHHCCCHHHHHHHHHcCCccc-hhccCCCCCCHHHHHHHH-CCCHHHHHHHHhCCC
Confidence 2222 899999999999999999999999864 4 7778999999999 9 999999999998763
No 106
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.85 E-value=1.1e-21 Score=124.91 Aligned_cols=107 Identities=22% Similarity=0.240 Sum_probs=95.5
Q ss_pred cccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhH
Q 042183 27 QLQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESG 106 (179)
Q Consensus 27 ~~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~ 106 (179)
.....++||.|+..|+.+.++.|++ .+..++..|..|.| |||+|+..|+.+++++|+++|++.+.
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~------~g~~~~~~d~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~~~-------- 70 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLS------KGADVNARSKDGNT-PLHLAAKNGHAEIVKLLLAKGADVNA-------- 70 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTT------TTCCSSCCCSSSCC-TTHHHHTTTCHHHHHHHTTTTCCTTC--------
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHH------cCCCCCCcCCCCCC-HHHHHHHcCcHHHHHHHHHcCCCCcc--------
Confidence 3456789999999999999999987 56678889999999 99999999999999999999998877
Q ss_pred HHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHH
Q 042183 107 MIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPL 153 (179)
Q Consensus 107 ~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl 153 (179)
++..|+||||+|+..|+.+++++|++.|++++ ..+..|.+|-
T Consensus 71 ----~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n-~~~~~~~~~~ 112 (115)
T 2l6b_A 71 ----RSKDGNTPEHLAKKNGHHEIVKLLDAKGADVN-ARSWGSSHHH 112 (115)
T ss_dssp ----CCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHH-HHSCCCC---
T ss_pred ----cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-cCCccccccc
Confidence 89999999999999999999999999999986 7888888874
No 107
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.84 E-value=3.1e-21 Score=138.35 Aligned_cols=98 Identities=18% Similarity=0.149 Sum_probs=90.2
Q ss_pred cCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCC
Q 042183 65 VNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYS 144 (179)
Q Consensus 65 ~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~ 144 (179)
.+..|.| |||+|+..|+.+++++|++ +.+++. ++..|+||||+|+..|+.+++++|++.|++++ .
T Consensus 41 ~~~~g~t-~L~~A~~~g~~~~v~~Ll~-~~~~~~------------~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~ 105 (244)
T 3ui2_A 41 VVSEYET-PWWTAARKADEQALSQLLE-DRDVDA------------VDENGRTALLFVAGLGSDKCVRLLAEAGADLD-H 105 (244)
T ss_dssp HHHHHHH-HHHHHHTTTCHHHHHHTTT-TCCTTC------------BCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT-C
T ss_pred cccCCCC-HHHHHHHcCCHHHHHHHHc-CCCCCC------------cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-c
Confidence 3456889 9999999999999999999 887777 99999999999999999999999999999987 5
Q ss_pred CC-CCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 145 AN-NYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 145 ~~-~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
.+ ..|.||||+|+. .|+.+++++|+++|++++.
T Consensus 106 ~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~ga~~~~ 139 (244)
T 3ui2_A 106 RDMRGGLTALHMAAG-YVRPEVVEALVELGADIEV 139 (244)
T ss_dssp CCSSSCCCHHHHHHH-TTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCCCHHHHHHH-cCCHHHHHHHHHCCCCCCC
Confidence 66 889999999999 9999999999999998864
No 108
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.84 E-value=7.8e-21 Score=141.71 Aligned_cols=127 Identities=16% Similarity=0.083 Sum_probs=100.0
Q ss_pred cccCCHHHHHHHHcCC---hHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHH----cCCHHHHHHHHHhhc-----
Q 042183 27 QLQIDPNLFKAAAAGN---LEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAK----FGHCDIVSVLIERAK----- 94 (179)
Q Consensus 27 ~~~~~~~l~~A~~~g~---~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~----~g~~~~v~~ll~~~~----- 94 (179)
.....+|||.|+..|+ .+.++.|++ .....++.+|..|.| |||+|+. .|+.+++++|++.+.
T Consensus 161 d~~g~TpLh~A~~~g~~~~~~~~~~ll~-----~~~~~~~~~d~~g~t-pLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~ 234 (327)
T 1sw6_A 161 DNMGESCLVKAVKSVNNYDSGTFEALLD-----YLYPCLILEDSMNRT-ILHHIIITSGMTGCSAAAKYYLDILMGWIVK 234 (327)
T ss_dssp CTTCCCHHHHHHHSSHHHHTTCHHHHHH-----HHGGGGGEECTTCCC-HHHHHHHHHTSTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHhcccccHHHHHHHHH-----hhhccccCCCCCCCC-HHHHHHHHccccccHHHHHHHHHHHHHHHhc
Confidence 3456699999999998 788888876 222467889999999 9999999 899999999998853
Q ss_pred ---------------ccCCchhh-------------hhhHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCC
Q 042183 95 ---------------LLQHEDEE-------------LESGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSAN 146 (179)
Q Consensus 95 ---------------~~~~~~~~-------------~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~ 146 (179)
+++..... +....++.+|..|+||||+|+..|+.+++++|++.|++++ .+|
T Consensus 235 ~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~-~~d 313 (327)
T 1sw6_A 235 KQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPF-IAN 313 (327)
T ss_dssp GGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTT-CCC
T ss_pred ccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-ccC
Confidence 22221111 1111366789999999999999999999999999999986 899
Q ss_pred CCCCCHHHHHHHhcC
Q 042183 147 NYNKTPLCMVAEYEH 161 (179)
Q Consensus 147 ~~g~tpl~~A~~~~~ 161 (179)
..|+||||+|+. +|
T Consensus 314 ~~G~TpL~~A~~-~g 327 (327)
T 1sw6_A 314 KSGLRPVDFGAG-LE 327 (327)
T ss_dssp TTSCCGGGGTCC---
T ss_pred CCCCCHHHHHHh-cC
Confidence 999999999987 54
No 109
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.82 E-value=1.1e-20 Score=139.55 Aligned_cols=109 Identities=19% Similarity=0.133 Sum_probs=92.5
Q ss_pred ccCCHHHHHHHHc---CChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhh
Q 042183 28 LQIDPNLFKAAAA---GNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELE 104 (179)
Q Consensus 28 ~~~~~~l~~A~~~---g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~ 104 (179)
....++||.|+.. |+.++++.|++ .+..++.+|..|.| |||+|+..|+.+++++|+++|++++.
T Consensus 188 ~~g~t~Lh~A~~~~~~~~~~iv~~Ll~------~gadvn~~d~~G~T-pLh~A~~~g~~~~v~~Ll~~gad~~~------ 254 (301)
T 2b0o_E 188 APEELVLHLAVKVANQASLPLVDFIIQ------NGGHLDAKAADGNT-ALHYAALYNQPDCLKLLLKGRALVGT------ 254 (301)
T ss_dssp SCEECHHHHHHHTCCTTTHHHHHHHHH------HSSCTTCCCTTCCC-HHHHHHHTTCHHHHHHHHHTTCCCSC------
T ss_pred CCCccHHHHHHHhcccCcHHHHHHHHh------cCCCCCCCCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCCC------
Confidence 3455899999997 89999999988 56788899999999 99999999999999999999998888
Q ss_pred hHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCH
Q 042183 105 SGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSS 163 (179)
Q Consensus 105 ~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~ 163 (179)
+|..|.||||+|+..|+.+++++|++.|++ .|.||||+|+. .|+.
T Consensus 255 ------~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-------~g~tpLh~A~~-~g~~ 299 (301)
T 2b0o_E 255 ------VNEAGETALDIARKKHHKECEELLEQAQAG-------TFAFPLHVDYS-WVIS 299 (301)
T ss_dssp ------CCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-------TTSSCCC---------
T ss_pred ------cCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-------CCCChhHHHHh-cCCc
Confidence 999999999999999999999999998765 47899999999 8764
No 110
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.79 E-value=3.6e-21 Score=145.92 Aligned_cols=120 Identities=16% Similarity=0.074 Sum_probs=98.0
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCccc---ccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhH
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSL---LLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESG 106 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~---~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~ 106 (179)
..+|||.|+..|+.+++++|++ .+.. .+..+.+ .| |||+|+..|+.+++++|+++|++.+.
T Consensus 128 ~~tpL~~Aa~~G~~eiv~~Ll~------~gad~~~~~i~~~~-~T-pLh~Aa~~G~~eiv~~Ll~~ga~~~~-------- 191 (376)
T 2aja_A 128 NYQAFRLAAENGHLHVLNRLCE------LAPTEIMAMIQAEN-YH-AFRLAAENGHLHVLNRLCELAPTEAT-------- 191 (376)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHH------SCTTTHHHHHSHHH-HH-HHHHHHHTTCHHHHHHHHHSCGGGHH--------
T ss_pred CCCHHHHHHHcCCHHHHHHHHh------CCCCccccccCCCC-CC-HHHHHHHCCCHHHHHHHHHcCCccch--------
Confidence 4479999999999999999987 3321 1222222 77 99999999999999999999875321
Q ss_pred HHHhccCCCCcHHHHHH-HcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCC
Q 042183 107 MIRMMNKEKHTALHEAV-FHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKNCTSV 176 (179)
Q Consensus 107 ~~~~~~~~g~t~l~~A~-~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~ 176 (179)
...+..|+||||+|+ ..|+.+++++|++.|+ .|.|||++|+. .|+.+++++|+++|+++
T Consensus 192 --~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga--------~~~taL~~Aa~-~g~~evv~lL~~~ga~~ 251 (376)
T 2aja_A 192 --AMIQAENYYAFRWAAVGRGHHNVINFLLDCPV--------MLAYAEIHEFE-YGEKYVNPFIARHVNRL 251 (376)
T ss_dssp --HHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH--------HHHHHHHCTTT-TTTTTHHHHHHHHHHHH
T ss_pred --hccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC--------ccchHHHHHHH-CCCHHHHHHHHhcCccc
Confidence 125667899999999 9999999999998653 37899999999 99999999999988653
No 111
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.78 E-value=1.1e-18 Score=110.29 Aligned_cols=88 Identities=23% Similarity=0.299 Sum_probs=81.3
Q ss_pred ccCCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhhhHH
Q 042183 28 LQIDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELESGM 107 (179)
Q Consensus 28 ~~~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~ 107 (179)
....++||.|+..|+.+.++.|++ .+..++.+|..|.| |||+|+..|+.+++++|+++|++.+.
T Consensus 22 ~~g~t~L~~A~~~g~~~~v~~Ll~------~g~~i~~~d~~g~t-pLh~A~~~~~~~~v~~Ll~~ga~~~~--------- 85 (110)
T 2zgd_A 22 SDLGKKLLEAARAGQDDEVRILMA------NGADVAAKDKNGST-PLHLAARNGHLEVVKLLLEAGADVXA--------- 85 (110)
T ss_dssp CCHHHHHHHHHHHTCHHHHHHHHH------TTCCTTCCCTTCCC-HHHHHHHTTCHHHHHHHHHTTCCTTC---------
T ss_pred CccchHHHHHHHcCCHHHHHHHHH------cCCCCCccCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCccc---------
Confidence 344588999999999999999987 56788889999999 99999999999999999999998877
Q ss_pred HHhccCCCCcHHHHHHHcCCHHHHHHH
Q 042183 108 IRMMNKEKHTALHEAVFHKIVDVVKIL 134 (179)
Q Consensus 108 ~~~~~~~g~t~l~~A~~~g~~~~~~~L 134 (179)
++..|+||||+|+..|+.+++++|
T Consensus 86 ---~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 86 ---QDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp ---CCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred ---cccCCCcHHHHHHHcCCHHHHHHh
Confidence 999999999999999999999987
No 112
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.77 E-value=3.9e-18 Score=128.88 Aligned_cols=96 Identities=13% Similarity=0.131 Sum_probs=89.5
Q ss_pred CCCcHHHHHHHHc-CCHHHHHHHHHhhcccCCchhhhhhHHHHhcc--CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCC
Q 042183 68 KGDSRSLLVAAKF-GHCDIVSVLIERAKLLQHEDEELESGMIRMMN--KEKHTALHEAVFHKIVDVVKILTREDLDYPYS 144 (179)
Q Consensus 68 ~g~t~~L~~A~~~-g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~--~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~ 144 (179)
.+.+ +||.|+.. |+.+++++|+++|++++. .+ ..|.||||+|+..|+.+++++|+++|++++ .
T Consensus 198 ~~~t-~L~~Aa~~~g~~~~v~~LL~~Gadvn~------------~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn-~ 263 (368)
T 3jue_A 198 HPGA-LLFRASGHPPSLPTMADALAHGADVNW------------VNGGQDNATPLIQATAANSLLACEFLLQNGANVN-Q 263 (368)
T ss_dssp CHHH-HHHHHTSSSCCHHHHHHHHHTTCCTTC------------CCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-C
T ss_pred CCCc-HHHHHHHccCCHHHHHHHHHcCCCCCc------------cccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-C
Confidence 4456 99999999 999999999999998877 76 789999999999999999999999999987 8
Q ss_pred CCCCCCCHHHHHHHhcCCHHHHHHHHhcCCCCCC
Q 042183 145 ANNYNKTPLCMVAEYEHSSHMVVAILKNCTSVSH 178 (179)
Q Consensus 145 ~~~~g~tpl~~A~~~~~~~~~~~~Ll~~g~~~~~ 178 (179)
.|..|.||||+|+. .|+.+++++|+++|++++.
T Consensus 264 ~d~~G~TpLh~A~~-~g~~~~v~~LL~~Gad~~~ 296 (368)
T 3jue_A 264 ADSAGRGPLHHATI-LGHTGLACLFLKRGADLGA 296 (368)
T ss_dssp CCTTSCCHHHHHHH-HTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCCHHHHHHH-cCcHHHHHHHHHCcCCCCC
Confidence 99999999999999 9999999999999998864
No 113
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.76 E-value=3.6e-18 Score=124.67 Aligned_cols=95 Identities=16% Similarity=0.103 Sum_probs=87.9
Q ss_pred ccCCHHHHHHHHc---CChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhh
Q 042183 28 LQIDPNLFKAAAA---GNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELE 104 (179)
Q Consensus 28 ~~~~~~l~~A~~~---g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~ 104 (179)
....+|||.|+.. |+.++++.|++ .+..++.+|..|.| |||+|+..|+.+++++|+++|++++.
T Consensus 167 ~~g~t~Lh~A~~~~~~~~~~~v~~Ll~------~ga~in~~d~~g~T-pLh~A~~~g~~~~v~~Ll~~gad~~~------ 233 (278)
T 1dcq_A 167 EPDETALHLAVRSVDRTSLHIVDFLVQ------NSGNLDKQTGKGST-ALHYCCLTDNAECLKLLLRGKASIEI------ 233 (278)
T ss_dssp STTCBHHHHHHHHCCTTTHHHHHHHHH------HCSCTTCCCTTCCC-HHHHHHHTTCHHHHHHHHHTTCCTTC------
T ss_pred cCCCCcchHHHHhcccchHHHHHHHHH------CCCCccccCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCCC------
Confidence 3356999999999 89999999988 57788999999999 99999999999999999999998888
Q ss_pred hHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCC
Q 042183 105 SGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDY 141 (179)
Q Consensus 105 ~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~ 141 (179)
+|..|.||||+|+..|+.+++++|++.|++.
T Consensus 234 ------~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 234 ------ANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp ------CCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred ------ccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999999999998763
No 114
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.75 E-value=5.7e-18 Score=132.83 Aligned_cols=105 Identities=19% Similarity=0.158 Sum_probs=87.3
Q ss_pred ccCCHHHHHHHH---cCChHHHHHHHHHHHHhhCcccccccCCCCCcHHHHHHHHcCCHHHHHHHHHhhcccCCchhhhh
Q 042183 28 LQIDPNLFKAAA---AGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSLLVAAKFGHCDIVSVLIERAKLLQHEDEELE 104 (179)
Q Consensus 28 ~~~~~~l~~A~~---~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~ 104 (179)
....++||.|+. .|+.++++.|++ .+..++.+|..|.| |||+|+..|+.+++++|+++|++++.
T Consensus 169 ~~g~t~Lh~A~~~a~~g~~~~v~~Ll~------~ga~vn~~d~~g~T-pLh~A~~~g~~~~v~~Ll~~ga~~~~------ 235 (497)
T 3lvq_E 169 APEELVLHLAVKVANQASLPLVDFIIQ------NGGHLDAKAADGNT-ALHYAALYNQPDCLKLLLKGRALVGT------ 235 (497)
T ss_dssp CSCBCHHHHHHHTCCTTTHHHHHHHHH------HSCCTTCCCSSSCC-HHHHHTTTTCHHHHHHHHHTCCCCSC------
T ss_pred cccchHHHHHHHhcccccHHHHHHHHH------cCCCCCccCCCCCc-HHHHHHHcCCHHHHHHHHHcCCCCCC------
Confidence 345689999977 999999999998 67788999999999 99999999999999999999999888
Q ss_pred hHHHHhccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHH
Q 042183 105 SGMIRMMNKEKHTALHEAVFHKIVDVVKILTREDLDYPYSANNYNKTPLCMVAE 158 (179)
Q Consensus 105 ~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~ 158 (179)
+|..|+||||+|+..|+.+++++|++.|++.. . +|+|.+..
T Consensus 236 ------~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~-~------~~~h~~~~ 276 (497)
T 3lvq_E 236 ------VNEAGETALDIARKKHHKECEELLEQAQAGTF-A------FPLHVDYS 276 (497)
T ss_dssp ------CCTTCCCHHHHHHHTTCHHHHHHHHHTCC-------------------
T ss_pred ------cCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCC-C------Ccceeecc
Confidence 99999999999999999999999999999965 3 46665543
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=76.12 E-value=1.4 Score=21.18 Aligned_cols=20 Identities=25% Similarity=0.544 Sum_probs=16.9
Q ss_pred CCHHHHHHHHcCChHHHHHH
Q 042183 30 IDPNLFKAAAAGNLEPFKDM 49 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~l 49 (179)
++..++.||..|+.+.++.|
T Consensus 13 iEQqiyvA~seGd~etv~~L 32 (40)
T 1gp8_A 13 IRKQMDAAASKGDVETYRKL 32 (40)
T ss_dssp HHHHHHHHHTTSCHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHH
Confidence 34668999999999999877
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=63.86 E-value=23 Score=27.03 Aligned_cols=61 Identities=15% Similarity=0.092 Sum_probs=43.6
Q ss_pred HHHcCCHHHHHHHHHhhcccCCchhhhhhHHHHhcc--CCCCcHHHHHHHcCCHHHHHHHHhc
Q 042183 77 AAKFGHCDIVSVLIERAKLLQHEDEELESGMIRMMN--KEKHTALHEAVFHKIVDVVKILTRE 137 (179)
Q Consensus 77 A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~--~~g~t~l~~A~~~g~~~~~~~Ll~~ 137 (179)
.+..|+...|+.-+..|.+++..........++-.+ .-|.|.+|.|++..+.+++..|+..
T Consensus 29 gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTE 91 (454)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhc
Confidence 356788888888888888777644333333333322 3488999999999999999988863
No 117
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=32.93 E-value=1.5e+02 Score=22.74 Aligned_cols=51 Identities=10% Similarity=0.094 Sum_probs=36.9
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCCCCC-------------CCCCCHHHHHHHhcCCHHHHHHHHhc
Q 042183 121 EAVFHKIVDVVKILTREDLDYPYSAN-------------NYNKTPLCMVAEYEHSSHMVVAILKN 172 (179)
Q Consensus 121 ~A~~~g~~~~~~~Ll~~~~~~~~~~~-------------~~g~tpl~~A~~~~~~~~~~~~Ll~~ 172 (179)
..+..|....|+.-+..|.+.....+ .-|.|-+|+|.+ ..+.+++..|+..
T Consensus 28 ~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair-~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIR-FQRQDMLAILLTE 91 (454)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhh-hhhhhHHHHhhhc
Confidence 34556777777777767666442222 258999999999 9999999999863
No 118
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=29.69 E-value=1.2e+02 Score=20.00 Aligned_cols=121 Identities=12% Similarity=0.093 Sum_probs=64.1
Q ss_pred CCHHHHHHHHcCChHHHHHHHHHHHHhhCcccccccCCCCCcHHH-HHHHHcCCHHHHHHHHHhhcccCCc---------
Q 042183 30 IDPNLFKAAAAGNLEPFKDMAREEILEICPSLLLQVNAKGDSRSL-LVAAKFGHCDIVSVLIERAKLLQHE--------- 99 (179)
Q Consensus 30 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~g~t~~L-~~A~~~g~~~~v~~ll~~~~~~~~~--------- 99 (179)
.++.|-.|++.|+++....+.+. + .+...|. -| ..|...|+.++++.-..+..+...-
T Consensus 8 ~~~rF~LAL~lg~l~~A~e~a~~-l----------~~~~~Wk-~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~ 75 (177)
T 3mkq_B 8 PHIRFDLALEYGNLDAALDEAKK-L----------NDSITWE-RLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGD 75 (177)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHH-H----------CCHHHHH-HHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred hHHHHHHHHhcCCHHHHHHHHHH-h----------CCHHHHH-HHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCC
Confidence 44668889999999998777651 0 0111122 22 3344556666555544443322110
Q ss_pred hhh-hhhHHHHhccCCCCcHHHHHHHcCCHH-HHHHHHhcCCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHhc
Q 042183 100 DEE-LESGMIRMMNKEKHTALHEAVFHKIVD-VVKILTREDLDYPYSANNYNKTPLCMVAEYEHSSHMVVAILKN 172 (179)
Q Consensus 100 ~~~-~~~~~~~~~~~~g~t~l~~A~~~g~~~-~~~~Ll~~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~~Ll~~ 172 (179)
.+. .....+.....+-..+.+.+-..|.++ +++.|.+.|- -.-+...|.. +|..++++-+++.
T Consensus 76 ~e~L~kla~iA~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r---------~~eA~~~A~t-~g~~~~a~~~~~~ 140 (177)
T 3mkq_B 76 VNKLSKMQNIAQTREDFGSMLLNTFYNNSTKERSSIFAEGGS---------LPLAYAVAKA-NGDEAAASAFLEQ 140 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTC---------HHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCccHHHHHHHHHHcCCHHHHHHHHHHCCC---------hHHHHHHHHH-cCcHHHHHHHHHH
Confidence 000 011112223334445677777777754 6777765321 1135667777 8888888877653
Done!