Citrus Sinensis ID: 042185

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160--
Protein Sequence
CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHcccEEEEEccccccccccccccccEEEEcccccHHHHHHHHHHHHHHcccccEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHcccccEEEEccccccccccccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccEEEEEEccHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcEc
Coil and Loop (DISEMBL)
CSQGGIGHALARAFAASDcrvvatgrskatmadleqdprFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLvnnagvqcvgplaevplsameqtfntnvfgpmrlVQAVVphmayrkkgkiinvgsvtvaapgpwagtyTASKAALHSLTDTLRLELGHFGID
Flexible Loop (DISEMBL)
CSQGGIGHALARAFAASDCRVVATGRSKatmadleqdPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLelghfgid
Low Complexity Region (SEG)
CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID
Disordered region (IsUnstruct)
*******HALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHF***
Disordered Region (DISOPRED)
CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI*
Disordered Region (DISEMBL)
CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID
Disordered Region (DISPRO)
**QGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	162	2.2.26 [Sep-21-2011]
Q09851	296	NADPH-dependent 1-acyldih	yes	no	0.975	0.533	0.374	2e-20
Q4A054	234	Uncharacterized oxidoredu	yes	no	0.969	0.670	0.343	1e-19
Q9NYR8	311	Retinol dehydrogenase 8 O	yes	no	0.969	0.504	0.394	1e-18
Q9N126	312	Retinol dehydrogenase 8 O	yes	no	0.975	0.506	0.394	1e-18
Q0VFE7	309	Dehydrogenase/reductase S	yes	no	0.962	0.504	0.292	7e-18
A9UM79	311	Dehydrogenase/reductase S	no	no	0.975	0.508	0.303	3e-17
Q8CHS7	311	Dehydrogenase/reductase S	no	no	0.975	0.508	0.297	6e-17
Q0IH28	323	Dehydrogenase/reductase S	N/A	no	0.962	0.482	0.280	1e-16
Q99J47	323	Dehydrogenase/reductase S	no	no	0.938	0.470	0.291	1e-16
Q6IAN0	325	Dehydrogenase/reductase S	no	no	0.975	0.486	0.272	1e-16

>sp|Q09851|AYR1_SCHPO NADPH-dependent 1-acyldihydroxyacetone phosphate reductase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ayr1 PE=3 SV=2

 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 89/163 (54%), Gaps = 5/163 (3%)

Query: 1   CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           CS+GGIG+ALA  F     +V+AT R    M +L +       +LDV  E SV+ V   V
Sbjct: 12  CSEGGIGNALALKFHQEGFQVLATARQVERMDNLTK-AGLQTLKLDVTDEDSVREVEQEV 70

Query: 61  LEKF--GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
             KF  G +  L+NNAG  C  P  ++ +  + +  + N +G +R+ +A   H   R KG
Sbjct: 71  -RKFTNGSLHYLINNAGAPCSAPAIDLDIEDVSKVMDVNFYGVIRMNKAF-QHQLIRAKG 128

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            I+NV S+    P  +   Y ASKAAL + ++TLR+EL  FG+
Sbjct: 129 TIVNVNSLVSYVPFAFNAAYNASKAALLAYSNTLRIELAPFGV 171

Can convert acyl and alkyl dihydroxyacetone-phosphate (DHAP) into glycerolipids and ether lipids, respectively. Required for the biosynthesis of phosphatidic acid via the DHAP pathway, where it reduces 1-acyl DHAP to lysophosphatidic acid (LPA). Required for spore germination.
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 0EC: 1

>sp|Q4A054|Y0419_STAS1 Uncharacterized oxidoreductase SSP0419 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP0419 PE=3 SV=1

 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 90/163 (55%), Gaps = 6/163 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLE---QDPRFFVQE---LDVLSEQSVQNVLS 58
           GIG ++A   A    +VV TGR ++ +A++    QD +  V E   +DV  ++ V  ++ 
Sbjct: 17  GIGASIAETLANQGVKVVLTGRDESRLAEVAKRIQDNKQAVVETSIVDVTHKEEVTELVE 76

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
              EKFG+ID+LVN+AG+     + E  + A E   + N+ G +  + AV+P M  +  G
Sbjct: 77  KTKEKFGQIDILVNSAGLMLSSAITEGDVEAWEAMIDVNIKGTLYTINAVLPSMLNQSSG 136

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            IIN+ S++       +  Y+ASKAA+HS+T  L  EL   G+
Sbjct: 137 HIINIASISGFEVTKKSTLYSASKAAVHSITQGLEKELAKTGV 179

Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) (taxid: 342451)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q9NYR8|RDH8_HUMAN Retinol dehydrogenase 8 OS=Homo sapiens GN=RDH8 PE=1 SV=1

 Score = 92.4 bits (228), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/170 (39%), Positives = 91/170 (53%), Gaps = 13/170 (7%)

Query: 1   CSQGGIGHALARAFA---ASDCRVVATGRSKATMADLEQ------DPRFFVQELDVLSEQ 51
           CS  GIG  LA   A       +VVAT R       LE            V +LDV S++
Sbjct: 13  CS-SGIGLELAVQLAHDPKKRYQVVATMRDLGKKETLEAAAGEALGQTLTVAQLDVCSDE 71

Query: 52  SVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH 111
           SV   LS +    G++DVLVNNAG+  VGPL  + L+AM+  F+TN FG +RLV+AV+P 
Sbjct: 72  SVAQCLSCIQ---GEVDVLVNNAGMGLVGPLEGLSLAAMQNVFDTNFFGAVRLVKAVLPG 128

Query: 112 MAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           M  R++G I+ + SV       +   Y ASK AL    ++L ++L  F I
Sbjct: 129 MKRRRQGHIVVISSVMGLQGVIFNDVYAASKFALEGFFESLAIQLLQFNI 178

Retinol dehydrogenase with a clear preference for NADP. Converts all-trans-retinal to all-trans-retinol. May play a role in the regeneration of visual pigment at high light intensity.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 0

>sp|Q9N126|RDH8_BOVIN Retinol dehydrogenase 8 OS=Bos taurus GN=RDH8 PE=1 SV=1

 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/170 (39%), Positives = 92/170 (54%), Gaps = 12/170 (7%)

Query: 1   CSQGGIGHALARAFA---ASDCRVVATGRSKATMADLEQ------DPRFFVQELDVLSEQ 51
           CS G IG  LA   A       +VVAT R       LE            V +LDV S++
Sbjct: 13  CSSG-IGLELAVQLAHDPRQRYQVVATMRDLGKKGTLETAAGEALGQTLTVAQLDVCSDE 71

Query: 52  SVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH 111
           SV   L+ +  + G++DVLVNNAGV  VGPL  + L+AM+  F+TN FG +RLV+AV+P 
Sbjct: 72  SVAQCLNCI--QGGEVDVLVNNAGVGLVGPLEGLSLAAMQNVFDTNFFGAVRLVKAVLPS 129

Query: 112 MAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           M  R++G I+ V SV       +   Y ASK A+    ++L ++L  F I
Sbjct: 130 MKRRRQGHIVVVSSVMGLQGVVFNEVYAASKFAMEGFFESLAVQLLQFNI 179

Retinol dehydrogenase with a clear preference for NADP. Converts all-trans-retinal to all-trans-retinol. May play a role in the regeneration of visual pigment at high light intensity.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 0

>sp|Q0VFE7|DRS7B_XENTR Dehydrogenase/reductase SDR family member 7B OS=Xenopus tropicalis GN=dhrs7b PE=2 SV=1

 Score = 89.7 bits (221), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 87/171 (50%), Gaps = 15/171 (8%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD-------------PRFFVQELDVLSEQ 51
           G+G   A+ F A+  R+V  GRS+  + +L Q+             P   +   D+   +
Sbjct: 47  GLGRECAKVFYAAGTRLVLCGRSEEGLKNLVQELSQMRIKSAQLHKPHMVI--FDLSDVE 104

Query: 52  SVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH 111
           +V +  + +L   G++D+L+NNAG+   G + +  +S      +TN FGP+ L +A++P 
Sbjct: 105 AVNSAANEILHLTGRVDILINNAGISYRGTILDTKVSVDRMVMDTNYFGPVALTKALIPS 164

Query: 112 MAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           M   ++G I+ + SV      P+   Y+ASK A  +  D LR E+  + ID
Sbjct: 165 MIKNRRGHIVVISSVQGKISIPFRSAYSASKHATQAFFDCLRAEMSPYEID 215

Putative oxidoreductase.

Xenopus tropicalis (taxid: 8364)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|A9UM79|DRS7C_XENTR Dehydrogenase/reductase SDR family member 7C OS=Xenopus tropicalis GN=dhrs7c PE=2 SV=1

 Score = 87.8 bits (216), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 10/168 (5%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQ------DPRF-FVQELDVLSEQSVQNV 56
            G+G   +R F ++  R+V  G++   +  L        DP   F  +L +L    + N+
Sbjct: 47  SGLGKECSRVFHSAGARLVLCGKTWEKLEALHDALISVADPSVTFTPKLVLLDISDINNM 106

Query: 57  LS---NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMA 113
            +    + + +G +DVL+NNA ++  GPL  V L   ++  + N FGP+ LV+A++PHM 
Sbjct: 107 EAMGKEIQDCYGCVDVLINNASMKMKGPLQSVSLELDKKIMDANYFGPITLVKAILPHMI 166

Query: 114 YRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            R+ G+I+ V ++      P+   Y ASK A+    D LR E+  F +
Sbjct: 167 SRRTGQIVLVNTIQGKIGVPFRAAYAASKHAIQGFFDCLRAEVEEFDV 214

Putative oxidoreductase.

Xenopus tropicalis (taxid: 8364)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q8CHS7|DRS7C_MOUSE Dehydrogenase/reductase SDR family member 7C OS=Mus musculus GN=Dhrs7c PE=2 SV=3

 Score = 86.7 bits (213), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 86/168 (51%), Gaps = 10/168 (5%)

Query: 4   GGIGHALARAFAASDCRVVATGRS-------KATMADLEQDPRFFVQEL---DVLSEQSV 53
            G+G   AR F A   R+V  G++        AT+  +    + F  +L   D+     V
Sbjct: 47  SGLGKECARVFHAGGARLVLCGKNWEGLESLYATLTSVADPSKTFTPKLVLLDLSDISCV 106

Query: 54  QNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMA 113
           Q+V   VL+ +G +D+L+NNA V+  GP  ++ L   ++  + N FGP+ L + ++P+M 
Sbjct: 107 QDVAKEVLDCYGCVDILINNASVKVKGPAHKISLELDKKIMDANYFGPITLTKVLLPNMI 166

Query: 114 YRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            R+ G+I+ V ++      P+   Y ASK A+    D LR E+  + +
Sbjct: 167 SRRTGQIVLVNNIQAKFGIPFRTAYAASKHAVMGFFDCLRAEVEEYDV 214

Putative oxidoreductase.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q0IH28|DRS7B_XENLA Dehydrogenase/reductase SDR family member 7B OS=Xenopus laevis GN=dhrs7b PE=2 SV=1

 Score = 85.9 bits (211), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 15/171 (8%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD-------------PRFFVQELDVLSEQ 51
           G+G   A+ F A+   +V  GR +  + DL Q+             P   +   D+   +
Sbjct: 47  GLGKECAKVFYAAGSHLVLCGRDEERLKDLVQELNNMRLKSTQLHKPHMVI--FDLSDVE 104

Query: 52  SVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH 111
           +V      +L   G++D+L+NNAG+   G + +  +S      +TN FGP+ L +A++P 
Sbjct: 105 AVNTAAKEILHLAGRVDILINNAGISYRGTILDTKVSVDRMVMDTNYFGPVALTKALLPS 164

Query: 112 MAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           M   ++G ++ + SV      P+   Y+ASK A  +  D LR E+  + ID
Sbjct: 165 MIKNRRGHVVVISSVQGKISIPFRSAYSASKHATQAFFDCLRAEMSPYDID 215

Putative oxidoreductase.

Xenopus laevis (taxid: 8355)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q99J47|DRS7B_MOUSE Dehydrogenase/reductase SDR family member 7B OS=Mus musculus GN=Dhrs7b PE=2 SV=1

 Score = 85.9 bits (211), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 9/161 (5%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLE---------QDPRFFVQELDVLSEQSVQN 55
           G+G   A+ F A+  ++V  GR+   + +L          Q  + FV   D+    ++  
Sbjct: 63  GLGRECAKVFHAAGAKLVLCGRNVKALEELSRELAGSSQGQTHQPFVVTFDLADPGTIAA 122

Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
             + +L+ FG +DVL+NNAG+   G +++  +    +    N FGP+ L +A++P M  R
Sbjct: 123 AAAEILQCFGYVDVLINNAGISYRGTISDTIVDVDRKVMEINYFGPVALTKALLPSMVER 182

Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
           K+G I+ + S+      P+   Y+ASK A  +  D LR E+
Sbjct: 183 KQGHIVAISSIQGKISIPFRSAYSASKHATQAFFDCLRAEM 223

Putative oxidoreductase.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q6IAN0|DRS7B_HUMAN Dehydrogenase/reductase SDR family member 7B OS=Homo sapiens GN=DHRS7B PE=1 SV=2

 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 85/169 (50%), Gaps = 11/169 (6%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADL-----------EQDPRFFVQELDVLSEQSV 53
           G+G   A+ F A+  ++V  GR+   + +L            Q  + ++   D+    ++
Sbjct: 63  GLGKECAKVFYAAGAKLVLCGRNGGALEELIRELTASHATKVQTHKPYLVTFDLTDSGAI 122

Query: 54  QNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMA 113
               + +L+ FG +D+LVNNAG+   G + +  +   ++   TN FGP+ L +A++P M 
Sbjct: 123 VAAAAEILQCFGYVDILVNNAGISYRGTIMDTTVDVDKRVMETNYFGPVALTKALLPSMI 182

Query: 114 YRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
            R++G I+ + S+      P+   Y ASK A  +  D LR E+  + I+
Sbjct: 183 KRRQGHIVAISSIQGKMSIPFRSAYAASKHATQAFFDCLRAEMEQYEIE 231

Putative oxidoreductase.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	162
72255607	280	117M18_6 [Brassica rapa]	1.0	0.578	0.783	9e-73
297797545	285	short-chain dehydrogenase/reductase fami	1.0	0.568	0.753	3e-71
225438615	277	PREDICTED: uncharacterized oxidoreductas	1.0	0.584	0.783	8e-71
217426812	279	AT5G10050-like protein [Arabidopsis aren	1.0	0.580	0.771	1e-70
357463463	298	Retinol dehydrogenase [Medicago truncatu	1.0	0.543	0.765	1e-69
30682984	279	1-acylglycerone phosphate reductase [Ara	1.0	0.580	0.765	1e-69
10178182	341	unnamed protein product [Arabidopsis tha	1.0	0.475	0.746	1e-69
26453106	279	unknown protein [Arabidopsis thaliana]	1.0	0.580	0.765	1e-69
18424923	285	Rossmann-fold NAD(P)-binding domain-cont	1.0	0.568	0.746	1e-69
297807037	279	short-chain dehydrogenase/reductase fami	1.0	0.580	0.759	6e-69

>gi|72255607|gb|AAZ66925.1| 117M18_6 [Brassica rapa]

 Score =  277 bits (709), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 127/162 (78%), Positives = 144/162 (88%)

Query: 1   CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           CSQGGIGHALAR F+   CRVVAT RS++TM DLEQDPR FVQELDV SEQSV  V+SNV
Sbjct: 15  CSQGGIGHALAREFSDKGCRVVATSRSRSTMTDLEQDPRLFVQELDVQSEQSVSKVMSNV 74

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
           ++KFG+IDVLVNNAGVQCVGPLAE+P+SA+E TFNTNVFG MR+ QAVVPHM  +KKGKI
Sbjct: 75  IDKFGQIDVLVNNAGVQCVGPLAEIPMSAVENTFNTNVFGSMRMTQAVVPHMVSKKKGKI 134

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           +NVGS+TV APGPWAG YTA+KAA+H+LTDTLRLELG FGID
Sbjct: 135 VNVGSITVMAPGPWAGVYTATKAAIHALTDTLRLELGPFGID 176

Source: Brassica rapa

Species: Brassica rapa

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297797545|ref|XP_002866657.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297312492|gb|EFH42916.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  273 bits (697), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 122/162 (75%), Positives = 145/162 (89%)

Query: 1   CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           CSQGGIGHALAR F+A+ CRVVAT RS++TM +LE+DP+FFVQELDV SEQSV  ++S V
Sbjct: 16  CSQGGIGHALAREFSANGCRVVATSRSQSTMTELEKDPKFFVQELDVQSEQSVSKIVSKV 75

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
           ++KFG+IDVLVNNAGVQC+GPLAE+P+SAME TFNTNV G MR+ QAVVPHMA +KKGKI
Sbjct: 76  IDKFGQIDVLVNNAGVQCIGPLAEIPISAMENTFNTNVLGSMRMTQAVVPHMASKKKGKI 135

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           +N+GS+++ APGPWAG YTASKAALH+LTDTLRLEL  FGID
Sbjct: 136 VNIGSISIMAPGPWAGVYTASKAALHALTDTLRLELKPFGID 177

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225438615|ref|XP_002281012.1| PREDICTED: uncharacterized oxidoreductase C23D3.11 [Vitis vinifera]

 Score =  271 bits (692), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 127/162 (78%), Positives = 143/162 (88%)

Query: 1   CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           CS+GGIGHALARAFA   C VVAT RS  +MADL+ D RFF+QELDVLSE+SV +V S+V
Sbjct: 14  CSEGGIGHALARAFAEEKCLVVATSRSLPSMADLDHDSRFFLQELDVLSEESVHHVFSSV 73

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
           LEKFG+IDVLVNNAG+QCVGPLAE+PLSA+E TFNTNVFG MRL+QAV+PHMA R+KGKI
Sbjct: 74  LEKFGRIDVLVNNAGIQCVGPLAEIPLSAIENTFNTNVFGSMRLIQAVIPHMASRRKGKI 133

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           +N+GSVTV  PGPWAG YTASKAALHSLTDTLRLEL  FGID
Sbjct: 134 VNIGSVTVLGPGPWAGGYTASKAALHSLTDTLRLELRPFGID 175

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217426812|gb|ACK44520.1| AT5G10050-like protein [Arabidopsis arenosa]

 Score =  270 bits (691), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 125/162 (77%), Positives = 140/162 (86%)

Query: 1   CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           CSQGGIGHALAR F    CRVVAT RS++TM DLEQD R FV+ELDV S+Q+V  VLS V
Sbjct: 15  CSQGGIGHALAREFTEKGCRVVATSRSRSTMTDLEQDSRLFVKELDVQSDQNVSKVLSEV 74

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
           ++KFGKIDVLVNNAGVQCVGPLAE P+SAME TFNTNVFG MR+ QAVVPHM  +KKGKI
Sbjct: 75  IDKFGKIDVLVNNAGVQCVGPLAETPISAMENTFNTNVFGSMRMTQAVVPHMVSKKKGKI 134

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           +NVGS+TV APGPWAG YTA+KAA+H+LTDTLRLELG FGID
Sbjct: 135 VNVGSITVMAPGPWAGVYTATKAAIHALTDTLRLELGPFGID 176

Source: Arabidopsis arenosa

Species: Arabidopsis arenosa

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357463463|ref|XP_003602013.1| Retinol dehydrogenase [Medicago truncatula] gi|355491061|gb|AES72264.1| Retinol dehydrogenase [Medicago truncatula]

 Score =  267 bits (683), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 124/162 (76%), Positives = 145/162 (89%)

Query: 1   CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           CS GGIG+ALAR+FAA+ C VVAT RS++TMADL+QDP+FF+QELDV S++SV  V++ V
Sbjct: 36  CSGGGIGNALARSFAANSCNVVATSRSRSTMADLDQDPKFFLQELDVQSDESVNRVVNTV 95

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
           L+KFG+IDVLVNNAGV C GPLAEVPLSA++ TFNTNVFG MR+VQAVVPHMA RK+GKI
Sbjct: 96  LDKFGRIDVLVNNAGVPCTGPLAEVPLSAIQNTFNTNVFGSMRMVQAVVPHMATRKQGKI 155

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           +NVGSVT  A GPW GTY+ASKAALH+LTDTLRLELGHFGID
Sbjct: 156 VNVGSVTALASGPWGGTYSASKAALHALTDTLRLELGHFGID 197

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30682984|ref|NP_196567.2| 1-acylglycerone phosphate reductase [Arabidopsis thaliana] gi|109946443|gb|ABG48400.1| At5g10050 [Arabidopsis thaliana] gi|332004104|gb|AED91487.1| 1-acylglycerone phosphate reductase [Arabidopsis thaliana]

 Score =  267 bits (682), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 124/162 (76%), Positives = 139/162 (85%)

Query: 1   CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           CSQGGIGHALAR F    CRVVAT RS++TM DLEQD R FV+ELDV S+Q+V  VLS V
Sbjct: 15  CSQGGIGHALAREFTEKGCRVVATSRSRSTMTDLEQDSRLFVKELDVQSDQNVSKVLSEV 74

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
           ++KFGKIDVLVNNAGVQCVGPLAE P+SAME TFNTNVFG MR+ QAVVPHM  +KKGKI
Sbjct: 75  IDKFGKIDVLVNNAGVQCVGPLAETPISAMENTFNTNVFGSMRMTQAVVPHMVSKKKGKI 134

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           +NVGS+TV APGPWAG YTA+KAA+H+LTDTLRLEL  FGID
Sbjct: 135 VNVGSITVMAPGPWAGVYTATKAAIHALTDTLRLELRPFGID 176

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|10178182|dbj|BAB11656.1| unnamed protein product [Arabidopsis thaliana]

 Score =  267 bits (682), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 121/162 (74%), Positives = 143/162 (88%)

Query: 1   CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           CSQGGIGHALAR F+A+ CRVVAT RS+ TM +LE+D +FFVQELDV SEQSV  V+S V
Sbjct: 16  CSQGGIGHALAREFSANGCRVVATSRSQKTMTELEKDSKFFVQELDVQSEQSVSKVVSKV 75

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
           ++KFG+IDVLVNNAGVQC+GPLAE+P+SAM+ TFNTNV G MR+ QAVVPHMA +KKGKI
Sbjct: 76  IDKFGQIDVLVNNAGVQCIGPLAEIPISAMDYTFNTNVLGSMRMTQAVVPHMASKKKGKI 135

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           +N+GS+++ APGPWAG YTASKAALH+LTDTLRLEL  FGID
Sbjct: 136 VNIGSISIMAPGPWAGVYTASKAALHALTDTLRLELKPFGID 177

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|26453106|dbj|BAC43629.1| unknown protein [Arabidopsis thaliana]

 Score =  267 bits (682), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 124/162 (76%), Positives = 139/162 (85%)

Query: 1   CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           CSQGGIGHALAR F    CRVVAT RS++TM DLEQD R FV+ELDV S+Q+V  VLS V
Sbjct: 15  CSQGGIGHALAREFTEKGCRVVATSRSRSTMTDLEQDSRLFVKELDVQSDQNVSKVLSEV 74

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
           ++KFGKIDVLVNNAGVQCVGPLAE P+SAME TFNTNVFG MR+ QAVVPHM  +KKGKI
Sbjct: 75  IDKFGKIDVLVNNAGVQCVGPLAETPISAMENTFNTNVFGSMRMTQAVVPHMVSKKKGKI 134

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           +NVGS+TV APGPWAG YTA+KAA+H+LTDTLRLEL  FGID
Sbjct: 135 VNVGSITVMAPGPWAGVYTATKAAIHALTDTLRLELRPFGID 176

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18424923|ref|NP_569008.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|15983432|gb|AAL11584.1|AF424590_1 AT5g10050/T31P16_40 [Arabidopsis thaliana] gi|20466145|gb|AAM19994.1| AT5g10050/T31P16_40 [Arabidopsis thaliana] gi|332010634|gb|AED98017.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  266 bits (681), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 121/162 (74%), Positives = 143/162 (88%)

Query: 1   CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           CSQGGIGHALAR F+A+ CRVVAT RS+ TM +LE+D +FFVQELDV SEQSV  V+S V
Sbjct: 16  CSQGGIGHALAREFSANGCRVVATSRSQKTMTELEKDSKFFVQELDVQSEQSVSKVVSKV 75

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
           ++KFG+IDVLVNNAGVQC+GPLAE+P+SAM+ TFNTNV G MR+ QAVVPHMA +KKGKI
Sbjct: 76  IDKFGQIDVLVNNAGVQCIGPLAEIPISAMDYTFNTNVLGSMRMTQAVVPHMASKKKGKI 135

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           +N+GS+++ APGPWAG YTASKAALH+LTDTLRLEL  FGID
Sbjct: 136 VNIGSISIMAPGPWAGVYTASKAALHALTDTLRLELKPFGID 177

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297807037|ref|XP_002871402.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297317239|gb|EFH47661.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  265 bits (676), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 123/162 (75%), Positives = 138/162 (85%)

Query: 1   CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           CSQGGIGHALAR F    CRVVAT RS++TM DLEQD R FV+ELDV S+ +V  VLS V
Sbjct: 15  CSQGGIGHALAREFTEKGCRVVATSRSRSTMTDLEQDSRLFVKELDVQSDPNVSKVLSEV 74

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
           ++KFGKIDVLVNNAGVQCVGPLAE P+SAME TFNTNVFG MR+ QAVVPHM  +KKGKI
Sbjct: 75  IDKFGKIDVLVNNAGVQCVGPLAETPISAMENTFNTNVFGSMRMTQAVVPHMVSKKKGKI 134

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           +NVGS+TV APGPWAG YTA+KAA+H+LTDTLRLEL  FGID
Sbjct: 135 VNVGSITVMAPGPWAGVYTATKAAIHALTDTLRLELRPFGID 176

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	162
TAIR|locus:2184098	279	AT5G10050 [Arabidopsis thalian	1.0	0.580	0.765	4.7e-64
TAIR|locus:505006716	285	AT5G65205 [Arabidopsis thalian	1.0	0.568	0.746	9.7e-64
DICTYBASE|DDB_G0289259	292	DDB_G0289259 "short-chain dehy	0.987	0.547	0.360	5.3e-24
ASPGD|ASPL0000066053	297	AN10875 [Emericella nidulans (	0.987	0.538	0.402	2.3e-23
ASPGD|ASPL0000056938	282	AN9378 [Emericella nidulans (t	0.987	0.567	0.370	4.8e-23
UNIPROTKB|G4MMG8	302	MGG_16186 "Uncharacterized pro	0.981	0.526	0.382	3.4e-22
UNIPROTKB|G4N5G2	289	MGG_09068 "NADPH-dependent 1-a	0.981	0.550	0.379	3.4e-22
UNIPROTKB|G4N286	284	MGG_12983 "Uncharacterized pro	0.987	0.563	0.382	9e-22
ASPGD|ASPL0000035690	279	AN3276 [Emericella nidulans (t	0.993	0.577	0.361	1.1e-21
POMBASE|SPAC23D3.11	296	ayr1 "1-acyldihydroxyacetone p	0.975	0.533	0.374	3e-21

TAIR|locus:2184098 AT5G10050 [Arabidopsis thaliana (taxid:3702)]

 Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
 Identities = 124/162 (76%), Positives = 139/162 (85%)

Query:     1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
             CSQGGIGHALAR F    CRVVAT RS++TM DLEQD R FV+ELDV S+Q+V  VLS V
Sbjct:    15 CSQGGIGHALAREFTEKGCRVVATSRSRSTMTDLEQDSRLFVKELDVQSDQNVSKVLSEV 74

Query:    61 LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
             ++KFGKIDVLVNNAGVQCVGPLAE P+SAME TFNTNVFG MR+ QAVVPHM  +KKGKI
Sbjct:    75 IDKFGKIDVLVNNAGVQCVGPLAETPISAMENTFNTNVFGSMRMTQAVVPHMVSKKKGKI 134

Query:   121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
             +NVGS+TV APGPWAG YTA+KAA+H+LTDTLRLEL  FGID
Sbjct:   135 VNVGSITVMAPGPWAGVYTATKAAIHALTDTLRLELRPFGID 176

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:505006716 AT5G65205 [Arabidopsis thaliana (taxid:3702)]

 Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
 Identities = 121/162 (74%), Positives = 143/162 (88%)

Query:     1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
             CSQGGIGHALAR F+A+ CRVVAT RS+ TM +LE+D +FFVQELDV SEQSV  V+S V
Sbjct:    16 CSQGGIGHALAREFSANGCRVVATSRSQKTMTELEKDSKFFVQELDVQSEQSVSKVVSKV 75

Query:    61 LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
             ++KFG+IDVLVNNAGVQC+GPLAE+P+SAM+ TFNTNV G MR+ QAVVPHMA +KKGKI
Sbjct:    76 IDKFGQIDVLVNNAGVQCIGPLAEIPISAMDYTFNTNVLGSMRMTQAVVPHMASKKKGKI 135

Query:   121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
             +N+GS+++ APGPWAG YTASKAALH+LTDTLRLEL  FGID
Sbjct:   136 VNIGSISIMAPGPWAGVYTASKAALHALTDTLRLELKPFGID 177

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

DICTYBASE|DDB_G0289259 DDB_G0289259 "short-chain dehydrogenase/reductase (SDR) family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 58/161 (36%), Positives = 93/161 (57%)

Query:     1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
             C   GIG +L++AF     +V ++ R+  +M +L       ++ LDV  + S+++ ++ +
Sbjct:    12 CGGNGIGKSLSKAFYEYGFKVYSSSRNLESMNELSSMGINTIR-LDVKDKLSIESAVNQI 70

Query:    61 LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
             ++  GKID+L+NNAG+       ++P   +E  F TN  G +R  + V  HM   + G I
Sbjct:    71 IKNEGKIDILINNAGISSFNTWIDMPDEELEDVFQTNTLGLIRTTREVAKHMIKERTGLI 130

Query:   121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             IN+GSV    P P +G Y ASKAALHS  +++R+EL  F I
Sbjct:   131 INIGSVAGFIPMPISGLYCASKAALHSFNESIRVELSPFSI 171

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

ASPGD|ASPL0000066053 AN10875 [Emericella nidulans (taxid:162425)]

 Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
 Identities = 66/164 (40%), Positives = 90/164 (54%)

Query:     1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
             C+ GGIG+ALAR F  +  RV AT R+ + + DLE         L V  E SVQ   + V
Sbjct:    16 CAPGGIGNALAREFYRNGLRVFATARNASQLEDLEAIG-IETLSLTVDDEDSVQLCFAEV 74

Query:    61 LEKFGK--IDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
               + G   +D LVNNAG     P  EV L+ +  TF  N F  + + +  VP +  + KG
Sbjct:    75 ERRLGHKGLDYLVNNAGRNYTVPATEVDLTEVRATFEVNFFSVVYICKTFVP-LLIKAKG 133

Query:   119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
              I+ +GSV    P  +   Y ASKAALHS +DTLR+EL  +G++
Sbjct:   134 TIVQIGSVAGIIPYVFGSIYNASKAALHSYSDTLRVELAPYGVN 177

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000329 "fungal-type vacuole membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

ASPGD|ASPL0000056938 AN9378 [Emericella nidulans (taxid:162425)]

 Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 60/162 (37%), Positives = 91/162 (56%)

Query:     2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-DPRFFVQELDVL-SEQSVQNVLSN 59
             +  G GH       +   +V+AT R  + ++DL+Q  P     ELDV  S++ + +  + 
Sbjct:    10 TSSGFGHEFVTQLLSRGDKVIATARILSRISDLKQLGPDVVTLELDVTASQRELNDKAAE 69

Query:    60 VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
              ++ FGK+DVLVNNAG    G L ++      + F TNVFGP+ + +A +PH   ++ G 
Sbjct:    70 AIQVFGKVDVLVNNAGFVKFGFLEDLSEDDYIKQFKTNVFGPINVARAFLPHFRSQRSGT 129

Query:   120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             I+N+GS++     P  G Y+ASKAAL   T+ L  ELG  GI
Sbjct:   130 IVNIGSMSAWETYPGVGPYSASKAALRYATEALSQELGPTGI 171

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|G4MMG8 MGG_16186 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 62/162 (38%), Positives = 88/162 (54%)

Query:     1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
             C+ GGIGHALA  + A    V+AT R    M DL +        LDV   +S++     V
Sbjct:    15 CTPGGIGHALALEYHAKGLHVIATARRPEVMKDLAE-AGMTTLPLDVTKTESIEECKKAV 73

Query:    61 LEKFG-KIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
              E  G ++D+LVNNAG   V P  ++ L  +   F  NVFG M +V+A  P +    KG 
Sbjct:    74 SELTGGRLDILVNNAGGSIVVPATDMDLDDVRWMFEANVFGVMAMVKAFAP-LLIATKGL 132

Query:   120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             II + S++   P  +A  Y+ASK AL+S +  LR+E+  FG+
Sbjct:   133 IIMISSLSSVTPYLFASAYSASKGALNSYSRVLRMEMRPFGV 174

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|G4N5G2 MGG_09068 "NADPH-dependent 1-acyldihydroxyacetone phosphate reductase" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 63/166 (37%), Positives = 91/166 (54%)

Query:     1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQ--ELDVLSEQSVQ---N 55
             CS GGIG+ALA AFA     V AT R  +   DL +     +Q  +LDV S +S++    
Sbjct:    19 CSSGGIGYALAEAFADVGYHVFATARDLSKAKDLTKHSSGNIQLLQLDVSSSESIKACVT 78

Query:    56 VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
              + +  E  G +DVLVNNAG     PL +V L    QT+  NV+G + L Q     +  +
Sbjct:    79 AVDSATEGRG-LDVLVNNAGGVHTMPLLDVDLDKARQTYEVNVWGVLALAQGFAG-LLIK 136

Query:   116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
               G ++N+ S+      PW G Y +SKAA+ +L++TLRLE+   G+
Sbjct:   137 TGGVLMNIASIAAGVVMPWGGIYNSSKAAVANLSETLRLEMAPLGV 182

GO:0005575 "cellular_component" evidence=ND

GO:0043581 "mycelium development" evidence=IEP

UNIPROTKB|G4N286 MGG_12983 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
 Identities = 62/162 (38%), Positives = 88/162 (54%)

Query:     1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
             C  GGIGHALA  F  +   V+AT     +   LE   +  V +LDV  E  +    S +
Sbjct:    14 CGDGGIGHALANNFVQNGFIVIATLLPHESRTHLEH-AKIHVIDLDVTKEDQMIPFRSTL 72

Query:    61 LE-KFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
              E   G +DVLVNNAG+      A+  +  +E+ F  NVFGPMRLV  +   +    +G 
Sbjct:    73 EEITGGTLDVLVNNAGICYTMTAADTDVKQVEKMFAVNVFGPMRLVHHLHRMLIAAPRGV 132

Query:   120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             I+N+GS+    P  +  +Y A+KAALH   +TLR+E+  FG+
Sbjct:   133 IVNIGSIGGVCPYVFGASYNATKAALHHWGNTLRVEMKPFGV 174

GO:0005575 "cellular_component" evidence=ND

ASPGD|ASPL0000035690 AN3276 [Emericella nidulans (taxid:162425)]

 Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 60/166 (36%), Positives = 88/166 (53%)

Query:     1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
             CS GGIG AL     A   +V AT RS A M+ L + P   +  LDV+   S+   +  V
Sbjct:    10 CSAGGIGSALVEELHARGLKVYATARSPAKMSHLAELPNVTLVTLDVVDPASIAAAVDTV 69

Query:    61 LEKFGK----IDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
              +        +D+L+NNAG   V P  +  +   ++ F+ N++G + + QA +P +   K
Sbjct:    70 RQDLSSNGDFLDILINNAGQSLVYPALDTSIDEAKRLFDVNLWGAIAVAQAFMPLLQAAK 129

Query:   117 KGK-IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
              G  ++NV S++     PW   Y ASKAAL S ++TLRLEL  F I
Sbjct:   130 NGSTLVNVCSISGFLYAPWMSVYNASKAALMSWSETLRLELQPFNI 175

GO:0006633 "fatty acid biosynthetic process" evidence=RCA

GO:0004316 "3-oxoacyl-[acyl-carrier-protein

GO:0008137 "NADH dehydrogenase (ubiquinone) activity" evidence=RCA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005811 "lipid particle" evidence=IEA

GO:0005741 "mitochondrial outer membrane" evidence=IEA

GO:0000140 "acylglycerone-phosphate reductase activity" evidence=IEA

GO:0006654 "phosphatidic acid biosynthetic process" evidence=IEA

POMBASE|SPAC23D3.11 ayr1 "1-acyldihydroxyacetone phosphate reductase (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 61/163 (37%), Positives = 89/163 (54%)

Query:     1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
             CS+GGIG+ALA  F     +V+AT R    M +L +       +LDV  E SV+ V   V
Sbjct:    12 CSEGGIGNALALKFHQEGFQVLATARQVERMDNLTK-AGLQTLKLDVTDEDSVREVEQEV 70

Query:    61 LEKF--GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
               KF  G +  L+NNAG  C  P  ++ +  + +  + N +G +R+ +A   H   R KG
Sbjct:    71 -RKFTNGSLHYLINNAGAPCSAPAIDLDIEDVSKVMDVNFYGVIRMNKAF-QHQLIRAKG 128

Query:   119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
              I+NV S+    P  +   Y ASKAAL + ++TLR+EL  FG+
Sbjct:   129 TIVNVNSLVSYVPFAFNAAYNASKAALLAYSNTLRIELAPFGV 171

GO:0000140 "acylglycerone-phosphate reductase activity" evidence=ISO

GO:0000329 "fungal-type vacuole membrane" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005739 "mitochondrion" evidence=ISO

GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006654 "phosphatidic acid biosynthetic process" evidence=ISO

GO:0033554 "cellular response to stress" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: scaffold_803250.1 annotation not avaliable (285 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	162
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	9e-65
cd05233	234	cd05233, SDR_c, classical (c) SDRs	4e-48
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	1e-45
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	3e-43
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	2e-41
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	6e-39
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	7e-39
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	1e-38
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	5e-37
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	2e-36
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	2e-36
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-34
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-34
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	2e-34
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-34
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	8e-34
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-34
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	8e-33
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	1e-32
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	1e-32
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	2e-32
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	2e-32
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	9e-32
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	3e-31
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	3e-31
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	3e-31
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-31
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	9e-31
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	2e-30
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	3e-30
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	5e-30
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	6e-30
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	9e-30
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	1e-29
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	2e-29
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	6e-29
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	7e-29
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	9e-29
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	4e-28
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	4e-28
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	6e-28
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	1e-27
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	1e-27
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	2e-27
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	4e-27
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	5e-27
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	1e-26
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	3e-26
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	3e-26
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	3e-26
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	3e-26
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	4e-26
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	4e-26
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	9e-26
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-26
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	1e-25
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	7e-25
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	1e-24
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	2e-24
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	2e-24
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	3e-24
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	4e-24
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	4e-24
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	1e-23
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	1e-23
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	2e-23
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	3e-23
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	3e-23
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	5e-23
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	5e-23
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	7e-23
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	9e-23
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	1e-22
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	2e-22
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	2e-22
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	3e-22
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	3e-22
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	3e-22
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	3e-22
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	4e-22
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	5e-22
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	5e-22
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	6e-22
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	7e-22
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	8e-22
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	1e-21
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	2e-21
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	2e-21
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	2e-21
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	2e-21
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	2e-21
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	2e-21
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	3e-21
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-21
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	4e-21
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	4e-21
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	4e-21
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	4e-21
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	5e-21
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	7e-21
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	1e-20
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	1e-20
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	2e-20
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	3e-20
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	3e-20
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	3e-20
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	3e-20
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	4e-20
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	4e-20
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	5e-20
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	7e-20
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	8e-20
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	9e-20
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	1e-19
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	1e-19
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	1e-19
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	2e-19
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	2e-19
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	2e-19
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	3e-19
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	3e-19
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	7e-19
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	7e-19
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	1e-18
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	2e-18
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	3e-18
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	4e-18
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	4e-18
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	5e-18
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	5e-18
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-18
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	6e-18
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	7e-18
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	1e-17
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	2e-17
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	2e-17
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	3e-17
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-17
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	4e-17
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	1e-16
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	1e-16
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	2e-16
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	2e-16
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	2e-16
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-16
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	3e-16
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	3e-16
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	3e-16
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	3e-16
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	4e-16
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	4e-16
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	4e-16
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	1e-15
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	2e-15
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	2e-15
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	2e-15
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	3e-15
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	3e-15
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	4e-15
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	6e-15
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	1e-14
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	2e-14
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	4e-14
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	4e-14
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	6e-14
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	7e-14
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	7e-14
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	8e-14
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	1e-13
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	1e-13
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	1e-13
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	2e-13
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	2e-13
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	3e-13
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	5e-13
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	9e-13
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	1e-12
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	1e-12
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	2e-12
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	2e-12
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	2e-12
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-12
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	2e-12
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	2e-12
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	3e-12
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	4e-12
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	4e-12
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	5e-12
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	5e-12
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	6e-12
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	6e-12
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	9e-12
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	1e-11
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	1e-11
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	1e-11
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	2e-11
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	2e-11
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	3e-11
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	6e-11
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	8e-11
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	9e-11
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	1e-10
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	1e-10
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	1e-10
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	2e-10
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	2e-10
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	3e-10
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	5e-10
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	2e-09
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	2e-09
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	3e-09
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	4e-09
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	5e-09
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	6e-09
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	1e-08
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	1e-07
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	2e-07
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	2e-07
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	2e-07
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	3e-07
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	4e-07
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	4e-07
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	4e-07
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	4e-07
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	5e-07
pfam08643	298	pfam08643, DUF1776, Fungal family of unknown funct	1e-06
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	1e-06
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	2e-06
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-06
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	3e-06
PRK09009	235	PRK09009, PRK09009, C factor cell-cell signaling p	3e-06
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	3e-06
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	4e-06
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	5e-06
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	5e-06
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-06
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	6e-06
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	8e-06
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	1e-05
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	2e-05
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	2e-05
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	2e-05
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	3e-05
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	5e-05
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	9e-05
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	1e-04
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	2e-04
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	3e-04
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	4e-04
pfam08659	181	pfam08659, KR, KR domain	5e-04
cd12165	314	cd12165, 2-Hacid_dh_6, Putative D-isomer specific	8e-04
PLN00015	308	PLN00015, PLN00015, protochlorophyllide reductase	8e-04
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	0.001
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	0.002
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	0.002
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	0.002
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	0.003
cd05237	287	cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l	0.003
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	0.004

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  197 bits (504), Expect = 9e-65
 Identities = 76/163 (46%), Positives = 102/163 (62%), Gaps = 3/163 (1%)

Query: 1   CSQGGIGHALARAFAASDCRVVATGRSKATMADL--EQDPRFFVQELDVLSEQSVQNVLS 58
           CS  GIG ALA A AA   RV+AT R+   +  L    +    V ELDV  E+S++  + 
Sbjct: 8   CS-SGIGLALALALAAQGYRVIATARNPDKLESLGELLNDNLEVLELDVTDEESIKAAVK 66

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
            V+E+FG+IDVLVNNAG    GPL E  +  + + F  NVFGP+R+ +A +P M  +  G
Sbjct: 67  EVIERFGRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRVTRAFLPLMRKQGSG 126

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +I+NV SV    P P+ G Y ASKAAL +L+++LRLEL  FGI
Sbjct: 127 RIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPFGI 169

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  155 bits (393), Expect = 4e-48
 Identities = 60/162 (37%), Positives = 89/162 (54%), Gaps = 4/162 (2%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQ----ELDVLSEQSVQNVLSN 59
            GIG A+AR  A    +VV   R++  +A+L             + DV  E+ V+ ++  
Sbjct: 8   SGIGRAIARRLAREGAKVVLADRNEEALAELAAIEALGGNAVAVQADVSDEEDVEALVEE 67

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
            LE+FG++D+LVNNAG+   GPL E+     ++  + N+ G   L +A +PHM  +  G+
Sbjct: 68  ALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAALPHMKKQGGGR 127

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           I+N+ SV    P P    Y ASKAAL  LT +L LEL  +GI
Sbjct: 128 IVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGI 169

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score =  149 bits (379), Expect = 1e-45
 Identities = 63/157 (40%), Positives = 88/157 (56%), Gaps = 3/157 (1%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           GIG A A   A +  RV  T R+ A        P   + ELDV  + SVQ  +  V+ + 
Sbjct: 15  GIGRATAEKLARAGYRVFGTSRNPAR---AAPIPGVELLELDVTDDASVQAAVDEVIARA 71

Query: 65  GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG 124
           G+IDVLVNNAGV   G   E  ++  +  F+TNVFG +R+ +AV+PHM  +  G+IIN+ 
Sbjct: 72  GRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINIS 131

Query: 125 SVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           SV    P P+   Y ASK A+   +++L  E+  FGI
Sbjct: 132 SVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQFGI 168

Length = 270

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  143 bits (363), Expect = 3e-43
 Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 6/165 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD------PRFFVQELDVLSEQSVQNVL 57
            GIG  LA+  A     ++   R +  +  L ++          V   D+   ++++ + 
Sbjct: 16  SGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLE 75

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             + E+ G IDVLVNNAG    GP  E+ L   E+    N+    RL +AV+P M  R  
Sbjct: 76  DELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGA 135

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           G IIN+GS     P P+   Y+A+KA + S ++ LR EL   G+ 
Sbjct: 136 GHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVK 180

Length = 265

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  138 bits (349), Expect = 2e-41
 Identities = 60/161 (37%), Positives = 84/161 (52%), Gaps = 3/161 (1%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQ---DPRFFVQELDVLSEQSVQNVLSNV 60
            GIG A ARA A +  +VV   R +  +  L             LDV    +V+  +  +
Sbjct: 16  SGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEAL 75

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
            E+FG+ID+LVNNAG+    PL E  L   ++  +TNV G +   +AV+P M  RK G I
Sbjct: 76  PEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHI 135

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           IN+GS+    P P    Y A+KAA+ + +  LR EL   GI
Sbjct: 136 INLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGI 176

Length = 246

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  132 bits (333), Expect = 6e-39
 Identities = 61/168 (36%), Positives = 81/168 (48%), Gaps = 13/168 (7%)

Query: 4   GGIGHALARAFAASDCRVVATGRSK--------ATMADLEQDPRFFVQELDVLS-EQSVQ 54
            GIG A+ARA A    RVV   R          A         R      DV   E+SV+
Sbjct: 15  SGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVE 74

Query: 55  NVLSNVLEKFGKIDVLVNNAGVQ-CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMA 113
            +++   E+FG+ID+LVNNAG+     PL E+     ++  + N+ G   L +A +P M 
Sbjct: 75  ALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLM- 133

Query: 114 YRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             KK +I+N+ SV      P    Y ASKAAL  LT  L LEL   GI
Sbjct: 134 --KKQRIVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAPRGI 179

Length = 251

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score =  132 bits (334), Expect = 7e-39
 Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 6/164 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQ------DPRFFVQELDVLSEQSVQNVLS 58
           GIG  LA   A    R+V + R +  + +++        P   V  LD+   +  + V+ 
Sbjct: 14  GIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPLDMSDLEDAEQVVE 73

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
             L+ FG +D+L+NNAG+       +  +    +    N FGP+ L +A +PH+  R +G
Sbjct: 74  EALKLFGGLDILINNAGISMRSLFHDTSIDVDRKIMEVNYFGPVALTKAALPHLIERSQG 133

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
            I+ V S+      P+   Y ASK AL    D+LR EL    I 
Sbjct: 134 SIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAELSEPNIS 177

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score =  132 bits (333), Expect = 1e-38
 Identities = 65/161 (40%), Positives = 94/161 (58%), Gaps = 3/161 (1%)

Query: 1   CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           CS G IG ALA AF A+   V AT R    +  L     F   +LDV    ++  +   +
Sbjct: 9   CSSG-IGRALADAFKAAGYEVWATARKAEDVEALAA-AGFTAVQLDVNDGAALARLAEEL 66

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
             + G +DVL+NNAG   +GPL +  + AM + F TNVF  + + +A+ P +  R +G +
Sbjct: 67  EAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLR-RSRGLV 125

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +N+GSV+     P+AG Y ASKAA+H+L+D LRLEL  FG+
Sbjct: 126 VNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGV 166

Length = 274

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score =  127 bits (322), Expect = 5e-37
 Identities = 63/160 (39%), Positives = 84/160 (52%), Gaps = 5/160 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQ--ELDVLSEQSVQNVLSNVLE 62
           GIG A AR  AA    V    R    M DL       V    LDV  E S++  +  ++ 
Sbjct: 14  GIGKATARRLAAQGYTVYGAARRVDKMEDLAS---LGVHPLSLDVTDEASIKAAVDTIIA 70

Query: 63  KFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIIN 122
           + G+IDVLVNNAG    G + +VP+    + F  N+FG  RL Q V+PHM  ++ G+IIN
Sbjct: 71  EEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIIN 130

Query: 123 VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           + S+      P    Y A+K AL   +D LRLE+  FGID
Sbjct: 131 ISSMGGKIYTPLGAWYHATKFALEGFSDALRLEVAPFGID 170

Length = 273

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score =  126 bits (319), Expect = 2e-36
 Identities = 65/162 (40%), Positives = 92/162 (56%), Gaps = 6/162 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLE 62
           G G ALA+A  A+  RVV T RS+A  AD E     R   + LDV    ++  V+++   
Sbjct: 15  GFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEA 74

Query: 63  KFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIIN 122
            FG IDVLVNNAG    G + E PL+ M + F  NVFG + + +AV+P M  R++G I+N
Sbjct: 75  TFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVN 134

Query: 123 VGSVT--VAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           + S+   +  PG   G Y  SK AL  ++++L  E+  FGI 
Sbjct: 135 ITSMGGLITMPG--IGYYCGSKFALEGISESLAKEVAPFGIH 174

Length = 277

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score =  126 bits (319), Expect = 2e-36
 Identities = 68/169 (40%), Positives = 95/169 (56%), Gaps = 16/169 (9%)

Query: 5   GIGHALARAFAASDCRVVATGR---------SKATMADLEQDPRFFVQELDVLSEQSVQN 55
           G G       A     V+AT R         S+AT  +L+Q     VQ+LDV  + S+ N
Sbjct: 14  GFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQ--NIKVQQLDVTDQNSIHN 71

Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
               VL++ G+ID+LVNNAG    G + E+P+    + F TNVFG + + QAV+P+M  +
Sbjct: 72  F-QLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQ 130

Query: 116 KKGKIINVGSVT--VAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           K GKIIN+ S++  V  PG     Y +SK AL   +++LRLEL  FGID
Sbjct: 131 KSGKIINISSISGRVGFPG--LSPYVSSKYALEGFSESLRLELKPFGID 177

Length = 280

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  120 bits (304), Expect = 2e-34
 Identities = 55/168 (32%), Positives = 88/168 (52%), Gaps = 14/168 (8%)

Query: 4   GGIGHALARAFAASDCRVVATGRS--------KATMADLEQDPRFFVQELDVLSEQSVQN 55
            G+G A+A   A +   VV   RS           +  L +  +    + DV  + +++ 
Sbjct: 16  RGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAV--QADVTDKAALEA 73

Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
            ++  +E+FG+ID+LVNNAG+    PLA++     ++  + N+ G   L++AVVP M  +
Sbjct: 74  AVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQ 133

Query: 116 KKGKIINVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
           + G+I+N+ SV    PG W G   Y A+KA L  LT  L  EL  +GI
Sbjct: 134 RGGRIVNISSVA-GLPG-WPGRSNYAAAKAGLVGLTKALARELAEYGI 179

Length = 249

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  120 bits (304), Expect = 2e-34
 Identities = 50/164 (30%), Positives = 73/164 (44%), Gaps = 6/164 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDP------RFFVQELDVLSEQSVQNVL 57
            GIG A+A   AA    VV    S    A+           +    + DV   +SV+  +
Sbjct: 15  RGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAV 74

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
                +FG +D+LVNNAG+     L  +     ++  +TN+ G   L +AV   M  ++ 
Sbjct: 75  DEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRS 134

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G+IIN+ SV      P    Y ASKA +   T +L  EL   GI
Sbjct: 135 GRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASRGI 178

Length = 248

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score =  120 bits (302), Expect = 2e-34
 Identities = 60/161 (37%), Positives = 90/161 (55%), Gaps = 11/161 (6%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADL--EQDPRFFVQ----ELDVLSEQSVQNVLS 58
           GIG A AR FA +  +++ TGR    + +L  E   +F V+    +LDV   +S++  L 
Sbjct: 11  GIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKVLPLQLDVSDRESIEAALE 70

Query: 59  NVLEKFGKIDVLVNNAG-VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
           N+ E+F  ID+LVNNAG    + P  E  L   E   +TNV G + + + ++P M  R +
Sbjct: 71  NLPEEFRDIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKGLLNVTRLILPIMIARNQ 130

Query: 118 GKIINVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLEL 156
           G IIN+GS  +A   P+AG   Y A+KAA+   +  LR +L
Sbjct: 131 GHIINLGS--IAGRYPYAGGNVYCATKAAVRQFSLNLRKDL 169

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  119 bits (301), Expect = 5e-34
 Identities = 52/165 (31%), Positives = 81/165 (49%), Gaps = 9/165 (5%)

Query: 4   GGIGHALARAFAASDCRVVATGRS----KATMADLEQDP---RFFVQELDVLSEQSVQNV 56
            GIG A+A   AA   +VV    +    +A  A+L       R  V   DV  E +V+ +
Sbjct: 15  RGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLV--FDVSDEAAVRAL 72

Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
           +   +E FG +D+LVNNAG+     L  +     ++  + N+ G   +V+A +P M   +
Sbjct: 73  IEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR 132

Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            G+I+N+ SV+     P    Y+A+KA +   T  L LEL   GI
Sbjct: 133 YGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELASRGI 177

Length = 246

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score =  118 bits (299), Expect = 8e-34
 Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 4/157 (2%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           GIG+A+A AF  +  +V+   ++  T  D      F    LDV    +V  V   +L + 
Sbjct: 19  GIGYAVALAFVEAGAKVIGFDQAFLTQEDY----PFATFVLDVSDAAAVAQVCQRLLAET 74

Query: 65  GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG 124
           G +DVLVN AG+  +G    +     +QTF  N  G   L +AV+P    ++ G I+ VG
Sbjct: 75  GPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVG 134

Query: 125 SVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           S     P      Y ASKAAL SL   + LEL  +G+
Sbjct: 135 SNAAHVPRIGMAAYGASKAALTSLAKCVGLELAPYGV 171

Length = 252

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  118 bits (299), Expect = 9e-34
 Identities = 63/162 (38%), Positives = 81/162 (50%), Gaps = 5/162 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           GIG  +AR FAA   RVV T R+    +   A++    R      DV  E  V+  ++  
Sbjct: 16  GIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAA 75

Query: 61  LEKFGKIDVLVNNAGVQCV-GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
           LE+FG +D+LVNNAG     GPL +V  +  ++ F  NV  P    QA VP M     G 
Sbjct: 76  LERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGA 135

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           I+NV S     P P  G Y ASK A+ +LT  L  ELG   I
Sbjct: 136 IVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGPDKI 177

Length = 251

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score =  116 bits (292), Expect = 8e-33
 Identities = 63/162 (38%), Positives = 84/162 (51%), Gaps = 5/162 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDP-RFFVQELDVLSEQSVQNVLSN 59
           GIG+A+ARA A +  RV A  R+       +ADL +    F   +LDV    +V  V+  
Sbjct: 9   GIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSAAVDEVVQR 68

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
           +  ++G IDVLVN AG+  +G +  +     + TF  N FG   + QAV P M  R+ G 
Sbjct: 69  LEREYGPIDVLVNVAGILRLGAIDSLSDEDWQATFAVNTFGVFNVSQAVSPRMKRRRSGA 128

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           I+ VGS     P      Y ASKAAL  LT  L LEL  +GI
Sbjct: 129 IVTVGSNAANVPRMGMAAYAASKAALTMLTKCLGLELAPYGI 170

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  115 bits (291), Expect = 1e-32
 Identities = 51/162 (31%), Positives = 75/162 (46%), Gaps = 5/162 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPRFFVQ-ELDVLSEQSVQNVLSN 59
           GIG  +A   A +   +V   R+    +     +E++         DV  E++++  +  
Sbjct: 16  GIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTCDVSDEEAIKAAVEA 75

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
           + E FGKID+LVNNAG+    P  E P +      + N+ G   + QAV  HM  +  GK
Sbjct: 76  IEEDFGKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVFFVSQAVARHMIKQGHGK 135

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           IIN+ S+     GP    Y ASK  +  LT  L  E    GI
Sbjct: 136 IINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARHGI 177

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score =  115 bits (290), Expect = 1e-32
 Identities = 57/163 (34%), Positives = 78/163 (47%), Gaps = 5/163 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQEL-----DVLSEQSVQNVLSN 59
           GIG A A AFA    +VV   RS   + +L ++ R    E      DV     V+     
Sbjct: 11  GIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAVVADVADAAQVERAADT 70

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
            +E+FG+ID  VNNAGV   G   +V      + F+ N  G +    A +PH+  R  G 
Sbjct: 71  AVERFGRIDTWVNNAGVAVFGRFEDVTPEEFRRVFDVNYLGHVYGTLAALPHLRRRGGGA 130

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           +INVGS+      P    Y+ASK A+   T++LR EL H G  
Sbjct: 131 LINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHDGAP 173

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score =  115 bits (291), Expect = 2e-32
 Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 7/165 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVLS 58
            GIG ALA   A +  ++V   R++  +A L Q+         V   DV   ++ + ++ 
Sbjct: 11  EGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIE 70

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVP-LSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             + +FG ID+LVNNAG+       E+  LS  E+    N  G +    A +PH+    +
Sbjct: 71  AAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-R 129

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           G+I+ V S+      P    Y ASK ALH   D+LR+EL   G+ 
Sbjct: 130 GQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDGVA 174

Length = 263

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score =  114 bits (288), Expect = 2e-32
 Identities = 56/161 (34%), Positives = 89/161 (55%), Gaps = 3/161 (1%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLE 62
            GIG ALAR F  +   V+ TGR +  +A+ +++ P      LDV   +SV+ +   +L 
Sbjct: 15  SGIGLALARKFLEAGNTVIITGRREERLAEAKKELPNIHTIVLDVGDAESVEALAEALLS 74

Query: 63  KFGKIDVLVNNAGVQCVGPLAEVP--LSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
           ++  +D+L+NNAG+Q    L +    L   +   +TN+ GP+RL++A +PH+  + +  I
Sbjct: 75  EYPNLDILINNAGIQRPIDLRDPASDLDKADTEIDTNLIGPIRLIKAFLPHLKKQPEATI 134

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +NV S     P      Y A+KAALHS T  LR +L   G+
Sbjct: 135 VNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQLKDTGV 175

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  113 bits (285), Expect = 9e-32
 Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 5/165 (3%)

Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQEL-----DVLSEQSVQNV 56
           +  GIG A+ARA A    RV    R++  +     + R     +     D+   + +  +
Sbjct: 9   ASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVVADLTDPEDIDRL 68

Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
           +    + FG++D+LVNNAG    GP AE+      + F+  +   +R+V+AV+P M  R 
Sbjct: 69  VEKAGDAFGRVDILVNNAGGPPPGPFAELTDEDWLEAFDLKLLSVIRIVRAVLPGMKERG 128

Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            G+I+N+ S+TV  P P       ++A L  L  TL  EL   G+
Sbjct: 129 WGRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPDGV 173

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score =  112 bits (282), Expect = 3e-31
 Identities = 54/158 (34%), Positives = 75/158 (47%), Gaps = 9/158 (5%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPR-------FFVQELDVLSEQSVQNVL 57
           GIG A A AFA +   +    RS+  +  L  + R        +  +L       +   +
Sbjct: 17  GIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEA--IAPGI 74

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
           + +LE+FG  DVL+NNAG+   GPL E+PLS  +     N+    +   AV+P M  R  
Sbjct: 75  AELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGG 134

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
           G IINV S+      P  G Y  SKAAL + T  L  E
Sbjct: 135 GLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEE 172

Length = 241

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score =  111 bits (281), Expect = 3e-31
 Identities = 58/161 (36%), Positives = 72/161 (44%), Gaps = 8/161 (4%)

Query: 3   QGGIGHALARAFAASDCR-VVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVL 61
             GIG A      A     V A  R   ++ DL   PR    +LDV    SV        
Sbjct: 15  NRGIGRAFVEQLLARGAAKVYAAARDPESVTDL--GPRVVPLQLDVTDPASVAAAA---- 68

Query: 62  EKFGKIDVLVNNAGV-QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
           E    + +LVNNAG+ +    L E    A+     TN FGP+ + +A  P +A    G I
Sbjct: 69  EAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAI 128

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +NV SV      P  GTY+ASKAA  SLT  LR EL   G 
Sbjct: 129 VNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQGT 169

Length = 238

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score =  111 bits (280), Expect = 3e-31
 Identities = 62/169 (36%), Positives = 83/169 (49%), Gaps = 15/169 (8%)

Query: 5   GIGHALARAFAASDC-RVVATGRSKATMADLE----QDPRFFVQELDVLSE--QSVQNVL 57
           GIG  L R   A     V+AT R  +   +L        R  + ELDV  E  +S + V 
Sbjct: 9   GIGLELVRQLLARGNNTVIATCRDPSAATELAALGASHSRLHILELDVTDEIAESAEAVA 68

Query: 58  SNVLEKFGKIDVLVNNAGV-QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
             +      +DVL+NNAG+    GP +EV    + + F  NV GP+ L QA +P +    
Sbjct: 69  ERL--GDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLTQAFLPLLLKGA 126

Query: 117 KGKIIN----VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           + KIIN    VGS+     G W   Y ASKAAL+ LT +L +EL   GI
Sbjct: 127 RAKIINISSRVGSIGDNTSGGWYS-YRASKAALNMLTKSLAVELKRDGI 174

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  111 bits (281), Expect = 4e-31
 Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 22/172 (12%)

Query: 4   GGIGHALARAFAASDCRVV-ATGRSKATMADLEQDPR------FFVQELDVLSEQSVQNV 56
           GGIG A+A   A    +VV A   ++    +L ++ +        V+  DV SE+ V+N+
Sbjct: 15  GGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKA-DVSSEEDVENL 73

Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
           +  ++EKFGKID+LVNNAG+   G + ++     ++  + N+ G M L +  +P+M  RK
Sbjct: 74  VEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK 133

Query: 117 KGKIINVGSVTVAAPGPWAGT-------YTASKAALHSLTDTLRLELGHFGI 161
            G I+N+ S+       W          Y+ASK A+++ T  L  EL   GI
Sbjct: 134 SGVIVNISSI-------WGLIGASCEVLYSASKGAVNAFTKALAKELAPSGI 178

Length = 247

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score =  111 bits (280), Expect = 9e-31
 Identities = 58/159 (36%), Positives = 84/159 (52%), Gaps = 2/159 (1%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLE 62
           G G A   A      RVVAT R  AT+ADL +    R     LDV    +V   +   +E
Sbjct: 14  GFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVE 73

Query: 63  KFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIIN 122
            FG++D++VNNAG    G + EV  S      +TN FG + + QAV+P++  ++ G II 
Sbjct: 74  HFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQ 133

Query: 123 VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           + S+   +  P +G Y ASK AL  +++ L  E+  FGI
Sbjct: 134 ISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAEFGI 172

Length = 275

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  110 bits (277), Expect = 2e-30
 Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 10/166 (6%)

Query: 4   GGIGHALARAFAASDCRVVATGRS----KATMADLEQD-PRFFVQELDVLSEQSVQNVLS 58
            GIG A+A   AA    V+          AT   +E    +   +++DV    +++  ++
Sbjct: 16  RGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVA 75

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
             +E FG++D+LV NAG+  + P AE+     E+  + N+ G   L QA +P +     G
Sbjct: 76  AGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGG 135

Query: 119 KIINVGSVT---VAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +I+   SV    V  PG  A  Y ASKA L   T  L LEL    I
Sbjct: 136 RIVLTSSVAGPRVGYPG-LAH-YAASKAGLVGFTRALALELAARNI 179

Length = 251

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score =  109 bits (274), Expect = 3e-30
 Identities = 61/160 (38%), Positives = 78/160 (48%), Gaps = 2/160 (1%)

Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVL 61
           +  GIG A+AR    +   V+A       +     DP   +  LDV    +V+ V S +L
Sbjct: 6   AAQGIGRAVARHLLQAGATVIALDL-PFVLLLEYGDP-LRLTPLDVADAAAVREVCSRLL 63

Query: 62  EKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
            + G ID LVN AGV   G    +     EQTF  NV G   L+QAV PHM  R+ G I+
Sbjct: 64  AEHGPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNLLQAVAPHMKDRRTGAIV 123

Query: 122 NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            V S     P      Y ASKAAL SL+  L LEL  +G+
Sbjct: 124 TVASNAAHVPRISMAAYGASKAALASLSKCLGLELAPYGV 163

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score =  109 bits (274), Expect = 5e-30
 Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 7/163 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVLSN 59
           G+G  LA   A +   VV   R+   + ++  +      R      D+  E    N+++ 
Sbjct: 16  GLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVAL 75

Query: 60  VLEKFGKIDVLVNNA-GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
            LE+FG++D LVNNA  V  + PLA+   +        NV G +RL QA  P +A    G
Sbjct: 76  ALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALA-ESGG 134

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            I+ + S+ +    P  G Y  +K AL + + +L  ELG  GI
Sbjct: 135 SIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLATELGPQGI 177

Length = 258

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  108 bits (273), Expect = 6e-30
 Identities = 55/164 (33%), Positives = 81/164 (49%), Gaps = 7/164 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPR-----FFVQELDVLSEQSVQNVLS 58
            GIG A+A   AA   +V  T RS+   A+  ++ +         E DV   ++V+ ++ 
Sbjct: 10  RGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSDREAVEALVE 69

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
            V  +FG +D+LVNNAG+     L  +     +   N N+ G   + QAV+  M  R+ G
Sbjct: 70  KVEAEFGPVDILVNNAGITRDNLLMRMSEEDWDAVINVNLTGVFNVTQAVIRAMIKRRSG 129

Query: 119 KIINVGSVTVAAPG-PWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +IIN+ SV V   G P    Y ASKA +   T +L  EL   GI
Sbjct: 130 RIINISSV-VGLIGNPGQANYAASKAGVIGFTKSLAKELASRGI 172

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score =  108 bits (272), Expect = 9e-30
 Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 11/167 (6%)

Query: 4   GGIGHALARAFAASDCRVVATGRSK------ATMADLEQDPRFFVQELDVLSEQSVQNVL 57
            GIG  LA  FA    +VV    ++      A     +   +    + DV   + V    
Sbjct: 9   SGIGRLLALEFAKRGAKVVILDINEKGAEETANNV-RKAGGKVHYYKCDVSKREEVYEAA 67

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             + ++ G + +L+NNAGV     L E+P   +E+TF  N        +A +P M  R  
Sbjct: 68  KKIKKEVGDVTILINNAGVVSGKKLLELPDEEIEKTFEVNTLAHFWTTKAFLPDMLERNH 127

Query: 118 GKIINVGSVT--VAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           G I+ + SV   ++  G     Y ASKAA     ++LRLEL  +G  
Sbjct: 128 GHIVTIASVAGLISPAG--LADYCASKAAAVGFHESLRLELKAYGKP 172

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score =  108 bits (272), Expect = 1e-29
 Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 11/162 (6%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDP-----RFFVQELDVLSEQSVQNVLSN 59
           G G  +A   A     V+A  +    +  L  +         V++LD+            
Sbjct: 13  GFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEW 72

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
                  +DVL+NNAG+   G + ++P+  + + F TNVFGP+ L Q  V  M  R KGK
Sbjct: 73  ------DVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGK 126

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           ++   S+     GP+ G Y ASK AL ++ + +  EL  FGI
Sbjct: 127 VVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELKPFGI 168

Length = 257

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score =  108 bits (271), Expect = 2e-29
 Identities = 57/163 (34%), Positives = 83/163 (50%), Gaps = 3/163 (1%)

Query: 1   CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           CS G IG   ARA  +   RV AT R +  +A LE +     Q LD    +S+  +++ V
Sbjct: 12  CSSG-IGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQ-LDYAEPESIAALVAQV 69

Query: 61  LEKF-GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
           LE   G++D L NN      G + ++P  A+   F  N FG   L + V+P M  + +G+
Sbjct: 70  LELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGR 129

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           I+   S+    P  + G Y ASK A+  L+ TLR+EL   GI 
Sbjct: 130 IVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQGSGIH 172

Length = 277

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score =  106 bits (268), Expect = 6e-29
 Identities = 61/162 (37%), Positives = 76/162 (46%), Gaps = 7/162 (4%)

Query: 5   GIGHALARAFAASDCRVVA----TGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           GIG A ARA AA   RV         +K T A+L          LDV    S    L  V
Sbjct: 16  GIGLATARALAALGARVAIGDLDEALAKETAAEL---GLVVGGPLDVTDPASFAAFLDAV 72

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
               G IDVLVNNAGV  VGP  + P +   +  + NV+G +   +   P M  R +G +
Sbjct: 73  EADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHV 132

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           +NV S+    P P   TY ASK A+   TD  RLEL   G+ 
Sbjct: 133 VNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVH 174

Length = 273

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  106 bits (266), Expect = 7e-29
 Identities = 49/162 (30%), Positives = 70/162 (43%), Gaps = 5/162 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADL-----EQDPRFFVQELDVLSEQSVQNVLSN 59
           G+G A A A A +   V       A   +L         R      D+    SVQ     
Sbjct: 18  GLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDA 77

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
                G +D LVNNAG+       E+ +   +   N NV G   +++A +PH+    +G+
Sbjct: 78  AAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGR 137

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           I+N+ S T     P  G Y ASK A+  +T +L  ELG  GI
Sbjct: 138 IVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELGGRGI 179

Length = 250

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score =  107 bits (270), Expect = 9e-29
 Identities = 53/160 (33%), Positives = 69/160 (43%), Gaps = 5/160 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQE-----LDVLSEQSVQNVLS 58
            G+G A ARAFA    +VV   R +  +  L  + R    E      DV   ++VQ    
Sbjct: 18  AGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAAD 77

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
              E+ G ID  VNNA V   GP  +V      +       G +    A + HM  R +G
Sbjct: 78  RAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRG 137

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH 158
            II VGS       P    Y A+K A+   TD+LR EL H
Sbjct: 138 AIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCELLH 177

Length = 334

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score =  104 bits (261), Expect = 4e-28
 Identities = 55/158 (34%), Positives = 82/158 (51%), Gaps = 7/158 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDP----RFFVQELDVLSEQSVQNVLSN 59
           GGIG ALA A AA+  R++  GR+   +  L        R      D+ SE   + VL+ 
Sbjct: 15  GGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLA- 73

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
              + G I+VL+NNAGV     L +    A+E+    N+  PM+L +A++P +  +    
Sbjct: 74  RAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAM 133

Query: 120 IINVGSVTVAAPG-PWAGTYTASKAALHSLTDTLRLEL 156
           ++NVGS T  + G P   +Y ASK AL   ++ LR EL
Sbjct: 134 VVNVGS-TFGSIGYPGYASYCASKFALRGFSEALRREL 170

Length = 263

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score =  104 bits (261), Expect = 4e-28
 Identities = 59/170 (34%), Positives = 81/170 (47%), Gaps = 12/170 (7%)

Query: 1   CSQGGIGHALARAFAASDCR---VVATGRSKATMADLEQDPR------FFVQELDVLSEQ 51
           CS G IG  LA   A+   +   V AT R       L +             +LDV   +
Sbjct: 8   CSSG-IGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETLQLDVCDSK 66

Query: 52  SVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH 111
           SV   +  V E    +DVLV NAGV  +GPL  +   AM   F+ NVFG +R++QA +P 
Sbjct: 67  SVAAAVERVTE--RHVDVLVCNAGVGLLGPLEALSEDAMASVFDVNVFGTVRMLQAFLPD 124

Query: 112 MAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           M  R  G+I+   SV      P+   Y ASK AL  L ++L ++L  F +
Sbjct: 125 MKRRGSGRILVTSSVGGLQGLPFNDVYCASKFALEGLCESLAVQLLPFNV 174

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score =  104 bits (261), Expect = 6e-28
 Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 5/162 (3%)

Query: 5   GIGHALARAFAASDCRV----VATGRSKATMADL-EQDPRFFVQELDVLSEQSVQNVLSN 59
           G+G A+A  +A    R+    V     + T+  L E     F Q  DV     +  +   
Sbjct: 11  GLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQA 70

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
             EK+G IDV+VNNAGV   G   E+ L   +     N+ G ++  +A +P    +K G+
Sbjct: 71  CEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGR 130

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           I+N+ S+     GP   +Y  +KA + +L++TL +EL    I
Sbjct: 131 IVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEI 172

Length = 270

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  102 bits (257), Expect = 1e-27
 Identities = 61/162 (37%), Positives = 83/162 (51%), Gaps = 8/162 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRSKAT---MADLEQDPRFFVQELDVLSEQSVQNVLSNVL 61
           GIGHA+A  FAA   RV    RS+      A L       +   DV   QSV+  ++ V+
Sbjct: 26  GIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLV-CDVSDSQSVEAAVAAVI 84

Query: 62  EKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
             FG+ID+LVN+AGV  + P  +V     ++T + N+ G   + QAV  HM     GKI+
Sbjct: 85  SAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIV 144

Query: 122 NVGS--VTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           N+ S    VA     A  Y ASKA +  +T  L LE G +GI
Sbjct: 145 NLASQAGVVALERHVA--YCASKAGVVGMTKVLALEWGPYGI 184

Length = 255

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  102 bits (257), Expect = 1e-27
 Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 6/166 (3%)

Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMAD------LEQDPRFFVQELDVLSEQSVQN 55
           +  GIG A+A   A    +V+ T RS    A+           +      DV   + V+ 
Sbjct: 6   ASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKA 65

Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
           V+  + E+ G ID+LVNNAG+     L  +     +   +TN+ G   L QAV+  M  +
Sbjct: 66  VVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQ 125

Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           + G+IIN+ SV           Y ASKA +   T +L  EL    I
Sbjct: 126 RSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNI 171

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  102 bits (255), Expect = 2e-27
 Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 11/166 (6%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMAD--LEQDPRFFVQEL----DVLSEQSVQNVLS 58
           GIG A+A   A +   VV   RSK   A+  +E+      + +    DV  E+ V  +  
Sbjct: 14  GIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAVQADVSKEEDVVALFQ 73

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY-RKK 117
           + +++FG +D+LVNNAG+Q      E+ L    +  + N+ G     +  +      + K
Sbjct: 74  SAIKEFGTLDILVNNAGLQGDASSHEMTLEDWNKVIDVNLTGQFLCAREAIKRFRKSKIK 133

Query: 118 GKIINVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
           GKIIN+ SV      PW G   Y ASK  +  +T TL  E    GI
Sbjct: 134 GKIINMSSVHEKI--PWPGHVNYAASKGGVKMMTKTLAQEYAPKGI 177

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  105 bits (265), Expect = 4e-27
 Identities = 54/163 (33%), Positives = 74/163 (45%), Gaps = 5/163 (3%)

Query: 4   GGIGHALARAFAASDCRVVAT----GRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSN 59
           GGIG A A+  AA    VV        ++A  A+L    R      DV  E +VQ     
Sbjct: 432 GGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEE 491

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG- 118
               FG +D++V+NAG+   GP+ E       ++F+ N  G   + +  V  M  +  G 
Sbjct: 492 AALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGG 551

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            I+ + S     PGP  G Y A+KAA   L   L LELG  GI
Sbjct: 552 SIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELGPDGI 594

Length = 681

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  101 bits (253), Expect = 5e-27
 Identities = 53/167 (31%), Positives = 79/167 (47%), Gaps = 9/167 (5%)

Query: 2   SQGGIGHALARAFAASDCRVVATGR-----SKATMADLEQDPRFFVQELDVLSEQSVQNV 56
           +  GIG A+ARA AA+   VV           A     +          DV  E  + ++
Sbjct: 9   AASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVTKEDEIADM 68

Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
           ++    +FG +D+LVNNAG+Q V P+ E P    ++     +      ++A +PHM  + 
Sbjct: 69  IAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAVMLTSAFHTIRAALPHMKKQG 128

Query: 117 KGKIINVGSV--TVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            G+IIN+ S    VA+P   A  Y A+K  L  LT  L LE+   GI
Sbjct: 129 WGRIINIASAHGLVASPFKSA--YVAAKHGLIGLTKVLALEVAEHGI 173

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  100 bits (250), Expect = 1e-26
 Identities = 52/168 (30%), Positives = 78/168 (46%), Gaps = 9/168 (5%)

Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--------DPRFFVQELDVLSEQSV 53
           S  GIG   A  FA    R+  TGR    + +  Q        + +  +   D+  E+  
Sbjct: 11  SSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLVVADLTEEEGQ 70

Query: 54  QNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMA 113
             ++S  L KFG++D+LVNNAG+   G   +  +   ++  N N+   + L +  VPH+ 
Sbjct: 71  DRIISTTLAKFGRLDILVNNAGILAKGGGEDQDIEEYDKVMNLNLRAVIYLTKLAVPHLI 130

Query: 114 YRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            + KG+I+NV SV      P    Y  SKAAL   T    LEL   G+
Sbjct: 131 -KTKGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALELAPKGV 177

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 99.2 bits (248), Expect = 3e-26
 Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 13/169 (7%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPRFFVQEL-----DVLSEQSVQN 55
           GIG ALA+        V+   RS    +  + ++E +     Q++     D+   + V+ 
Sbjct: 12  GIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYISADLSDYEEVEQ 71

Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
             +  +EK G  D++VN AG+   G   ++     E+  + N FG + +  AV+P M  +
Sbjct: 72  AFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGSLNVAHAVLPLMKEQ 131

Query: 116 KKGKIINVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGID 162
           + G I+ V S   AA     G   Y  SK AL  L ++LR EL  + I 
Sbjct: 132 RPGHIVFVSS--QAALVGIYGYSAYCPSKFALRGLAESLRQELKPYNIR 178

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 99.1 bits (247), Expect = 3e-26
 Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 5/162 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKA----TMADLEQDPRFFVQELDVLSEQSVQNVLSN 59
           GG+G A A   AA   RV   GR  A    T+  +  D    +  +D++  Q+ +  +  
Sbjct: 17  GGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADA-LRIGGIDLVDPQAARRAVDE 75

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
           V  +FG++D LVN AG    G +A+      ++ +  NV   +   +A +P +     G+
Sbjct: 76  VNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGR 135

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           I+N+G+      GP  G Y A+KA +  LT+ L  EL   GI
Sbjct: 136 IVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDRGI 177

Length = 239

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 98.6 bits (246), Expect = 3e-26
 Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 7/163 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQ----DPRFFVQELDVLSEQSVQNVLSN 59
            GIG  +ARA A    RV    R+     DL               D    +  + ++  
Sbjct: 10  RGIGIEIARALARDGYRVSLGLRN---PEDLAALSASGGDVEAVPYDARDPEDARALVDA 66

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
           + ++FG+IDVLV+NAG+     L E   + +E  F+ NV  P  L +A++P +     G+
Sbjct: 67  LRDRFGRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELTRALLPALREAGSGR 126

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           ++ + S++          Y+ASK AL +L   LR E    G+ 
Sbjct: 127 VVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDHGVR 169

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 99.0 bits (247), Expect = 3e-26
 Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 3/160 (1%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMAD-LEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
           GIG ALA+ F      V+  GR++  +A+   ++P    +  DV    S + ++  + ++
Sbjct: 16  GIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKE 75

Query: 64  FGKIDVLVNNAGVQCVGPL--AEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
           +  ++VL+NNAG+Q    L  AE  L   EQ   TN+  P+RL   ++PH+  + +  II
Sbjct: 76  YPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATII 135

Query: 122 NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           NV S     P      Y A+KAA+HS T  LR +L    +
Sbjct: 136 NVSSGLAFVPMASTPVYCATKAAIHSYTLALREQLKDTSV 175

Length = 245

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 99.1 bits (247), Expect = 4e-26
 Identities = 56/153 (36%), Positives = 74/153 (48%), Gaps = 5/153 (3%)

Query: 2   SQGGIGHALARAFAASDCRVVATGRS----KATMADLE-QDPRFFVQELDVLSEQSVQNV 56
           S  GIG+ALA   A +   V+  GR      A    L+ Q         DV    +V+  
Sbjct: 18  SSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAA 77

Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
           +     + G ID+LVNNAG+Q   PL + P  A E+   TN+     + QAV  HM  R 
Sbjct: 78  IDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG 137

Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLT 149
            GKIIN+ SV  A   P    YTA+K A+ +LT
Sbjct: 138 AGKIINIASVQSALARPGIAPYTATKGAVGNLT 170

Length = 255

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 98.6 bits (246), Expect = 4e-26
 Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 5/162 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADL-----EQDPRFFVQELDVLSEQSVQNVLSN 59
           GIG ALAR FA +   V    R    + +L       +P   V+ LDV  E+  Q V++ 
Sbjct: 9   GIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEERNQLVIAE 68

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
           +  + G +D+++ NAGV     L ++   A  +T +TN+ G   +++A +P    + +G 
Sbjct: 69  LEAELGGLDLVIINAGVGKGTSLGDLSFKAFRETIDTNLLGAAAILEAALPQFRAKGRGH 128

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           ++ + SV      P A  Y+ASKAAL SL ++LR ++   GI
Sbjct: 129 LVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGI 170

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 95.7 bits (239), Expect = 9e-26
 Identities = 45/161 (27%), Positives = 64/161 (39%), Gaps = 12/161 (7%)

Query: 4   GGIGHALARAFAASDCR-VVATGRSKAT--MADLEQD-----PRFFVQELDVLSEQSVQN 55
           GG+G ALAR  AA   R +V   R       A+L  +         V   DV    ++  
Sbjct: 10  GGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACDVADRDALAA 69

Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
           +L+ +    G +D +V+NAGV   GPL E+     E+     V G   L +         
Sbjct: 70  LLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWNLHELTRD----L 125

Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
             G  +   SV      P    Y A+ AAL +L +  R E 
Sbjct: 126 DLGAFVLFSSVAGVLGSPGQANYAAANAALDALAEHRRAEG 166

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 97.8 bits (244), Expect = 9e-26
 Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 5/156 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQ-DPRFFVQELDVLSEQSVQNVLSN 59
           GIG A+A A A     V    R+    KA   ++E    +  +   DV   + V   +  
Sbjct: 18  GIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQ 77

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
           +  + G ID+L+NNAG+   G   E+  +  E+    N+ G     +AV+P M  R+ G 
Sbjct: 78  LKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGD 137

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
           IIN+ S            Y+ASK  +  LT++L  E
Sbjct: 138 IINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQE 173

Length = 239

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 98.1 bits (245), Expect = 1e-25
 Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 10/165 (6%)

Query: 5   GIGHALARAFAASDCRVVAT------GRSKATMADLEQDPR-FFVQELDVLSEQSVQNVL 57
           GIG A+A AFA     V           ++ T   +E++ R   +   D+  E   ++++
Sbjct: 37  GIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRKCLLIPGDLGDESFCRDLV 96

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGP-LAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
             V+++FGK+D+LVNNA  Q     + ++    +E+TF TN+F    L +A +PH+  +K
Sbjct: 97  KEVVKEFGKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNIFSMFYLTKAALPHL--KK 154

Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
              IIN  SVT     P    Y A+K A+ + T  L L+L   GI
Sbjct: 155 GSSIINTTSVTAYKGSPHLLDYAATKGAIVAFTRGLSLQLAEKGI 199

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 95.7 bits (238), Expect = 7e-25
 Identities = 52/162 (32%), Positives = 80/162 (49%), Gaps = 5/162 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVLSN 59
           GIG A ARA AA    V    R    +  L  +      +  V ELDV  EQ V   +  
Sbjct: 14  GIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVLELDVTDEQQVDAAVER 73

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
            +E  G++D+LVNNAG+  +GP+ +   +   +  +TN+ G M    A +PH   R KG 
Sbjct: 74  TVEALGRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYTTHAALPHHLLRNKGT 133

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           I+N+ SV        +  Y A+K  +++ ++ LR E+   G+
Sbjct: 134 IVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTERGV 175

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 94.8 bits (236), Expect = 1e-24
 Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 5/158 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           GIG A+A AFA     V+AT  ++  + +LE+ P    + LDV  ++ V  +      + 
Sbjct: 13  GIGRAIALAFAREGANVIATDINEEKLKELERGPGITTRVLDVTDKEQVAALAK----EE 68

Query: 65  GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG 124
           G+IDVL N AG    G + +      +   N NV     +++AV+P M  RK G IIN+ 
Sbjct: 69  GRIDVLFNCAGFVHHGSILDCEDDDWDFAMNLNVRSMYLMIKAVLPKMLARKDGSIINMS 128

Query: 125 SVTVAAPG-PWAGTYTASKAALHSLTDTLRLELGHFGI 161
           SV  +  G P    Y+ +KAA+  LT ++  +    GI
Sbjct: 129 SVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGI 166

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 94.7 bits (236), Expect = 2e-24
 Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 3/163 (1%)

Query: 2   SQGGIGHALARAFAASDCRVVATGR--SKATMADLEQDPRFFVQELDVLSEQSVQNVLSN 59
           +  GIG A+A  + A   RVV      ++A +A LE  P      LDV  + S+  +++ 
Sbjct: 14  AASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAA 73

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG- 118
            +E+FG ID+L NNA +  + P+ ++   + ++ F  NV G   L+QAV  HM  + +G 
Sbjct: 74  AVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGG 133

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           KIIN+ S            Y A+KAA+ S T +  L L   GI
Sbjct: 134 KIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALIRHGI 176

Length = 257

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 94.3 bits (235), Expect = 2e-24
 Identities = 54/163 (33%), Positives = 78/163 (47%), Gaps = 8/163 (4%)

Query: 5   GIGHALARAFAASDCRVV---ATGRSKA--TMADLE-QDPRFFVQELDVLSEQSVQNVLS 58
           GIG A+A+  A     VV   A+ ++ A   +A++E    +    + DV     V  +  
Sbjct: 14  GIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGGKAIAVQADVSDPSQVARLFD 73

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
              + FG +D+LVNNAGV    P+AE      ++ F  N  G   ++Q     +  R  G
Sbjct: 74  AAEKAFGGVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTKGAFFVLQEAAKRL--RDGG 131

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +IIN+ S   AA  P  G Y  SKAA+ + T  L  ELG  GI
Sbjct: 132 RIINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELGGRGI 174

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 94.3 bits (235), Expect = 3e-24
 Identities = 54/170 (31%), Positives = 77/170 (45%), Gaps = 21/170 (12%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADL----EQDPRFFVQELDVLSEQSVQNVLSNV 60
           GIG A+ +   A+   VV         AD+     Q   +     DV S + V + ++ +
Sbjct: 20  GIGLAIVKELLANGANVV--------NADIHGGDGQHENYQFVPTDVSSAEEVNHTVAEI 71

Query: 61  LEKFGKIDVLVNNAG-------VQCVGPLAEVPLS--AMEQTFNTNVFGPMRLVQAVVPH 111
           +EKFG+ID LVNNAG       V    P  +  L+  A ++ FN N  G   + QAV   
Sbjct: 72  IEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQ 131

Query: 112 MAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           M  +  G I+N+ S            Y A+KAAL+S T +   ELG   I
Sbjct: 132 MVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKELGKHNI 181

Length = 266

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 94.0 bits (234), Expect = 4e-24
 Identities = 51/163 (31%), Positives = 76/163 (46%), Gaps = 5/163 (3%)

Query: 4   GGIGHALARAFAASDCRVVATG---RSKATMADLEQDPRFFVQ-ELDVLSEQSVQNVLSN 59
            GIG A+A+  AA    VV           +A+  Q     +  + DV SE  VQ+    
Sbjct: 11  SGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQGGPRALGVQCDVTSEAQVQSAFEQ 70

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK-G 118
            + +FG +D++V+NAG+    P+AE  L    ++ + N+ G   + +     M  +   G
Sbjct: 71  AVLEFGGLDIVVSNAGIATSSPIAETSLEDWNRSMDINLTGHFLVSREAFRIMKSQGIGG 130

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            I+   S    APGP A  Y+A+KAA   L   L LE G  GI
Sbjct: 131 NIVFNASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGGEDGI 173

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 93.5 bits (233), Expect = 4e-24
 Identities = 48/161 (29%), Positives = 71/161 (44%), Gaps = 5/161 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMAD----LEQDPRFFVQELDVLSEQSVQNVLSNV 60
           GIG A+A A  A   +V  T R +  + +    L           DV  E  VQ  +  +
Sbjct: 17  GIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAI 76

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
           +  FG +DVL+ NAGV    P+ E+         +TN+ G    ++A VP +  R  G I
Sbjct: 77  VAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALK-RGGGYI 135

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           IN+ S+           Y ASK  L   ++   L+L  +GI
Sbjct: 136 INISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGI 176

Length = 237

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 93.5 bits (233), Expect = 1e-23
 Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 5/162 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATM----ADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           GIG  LAR   A   ++      +A +    A+L  D R      DV    ++Q      
Sbjct: 20  GIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEA 79

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
           +E+FG IDV+V NAG+   G +A+V   A  +  + N+ G    V+A +P +  R +G +
Sbjct: 80  VERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYV 138

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           + V S+   A  P    Y ASKA + +  + LRLE+ H G+ 
Sbjct: 139 LQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHHGVT 180

Length = 296

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 92.7 bits (231), Expect = 1e-23
 Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 8/165 (4%)

Query: 5   GIGHALARAFAASDCRVVAT----GRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           G G+ LA+   +    V+A         A         R    +LDV   + ++     V
Sbjct: 11  GFGNLLAKKLDSLGFTVLAGCLTKNGPGAKELRRVCSDRLRTLQLDVTKPEQIKRAAQWV 70

Query: 61  LEKFGKIDV--LVNNAGVQCVGPLAE-VPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
            E  G+  +  LVNNAG+   G   E +P+    +    N+FG + + +A +P +  R K
Sbjct: 71  KEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKCMEVNLFGTVEVTKAFLP-LLRRAK 129

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           G+++NV S+    P P  G Y ASKAA+ + +D+LR EL  +G+ 
Sbjct: 130 GRVVNVSSMGGRVPFPAGGAYCASKAAVEAFSDSLRRELQPWGVK 174

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 91.9 bits (229), Expect = 2e-23
 Identities = 53/152 (34%), Positives = 73/152 (48%), Gaps = 4/152 (2%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           GIG  +ARAF A+   VV  GR      D    P  F    DV     V  ++  ++E+ 
Sbjct: 17  GIGAGIARAFLAAGATVVVCGRRAPETVD--GRPAEFHA-ADVRDPDQVAALVDAIVERH 73

Query: 65  GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM-AYRKKGKIINV 123
           G++DVLVNNAG       AE      E+    N+  P+ + QA    M      G I+N+
Sbjct: 74  GRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNI 133

Query: 124 GSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
           GSV+   P P    Y A+KA L +LT +L +E
Sbjct: 134 GSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVE 165

Length = 252

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 91.4 bits (227), Expect = 3e-23
 Identities = 50/167 (29%), Positives = 77/167 (46%), Gaps = 8/167 (4%)

Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMA-DLEQDPRFF-----VQELDVLSEQSVQN 55
           ++ GIG A+AR       RV+AT  S    A D  ++  F      ++ELDV   +    
Sbjct: 10  AKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAE 69

Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
            L+ + E+ G +D+LVNNAG+        +         NTN+     + Q +   M  +
Sbjct: 70  ALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ 129

Query: 116 KKGKIINVGSVTVAAPGPWAGT-YTASKAALHSLTDTLRLELGHFGI 161
             G+IIN+ SV     G +  T Y+A+KA +   T  L  E   +GI
Sbjct: 130 GYGRIINISSVN-GLKGQFGQTNYSAAKAGMIGFTKALASEGARYGI 175

Length = 245

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 94.2 bits (235), Expect = 3e-23
 Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 17/159 (10%)

Query: 5   GIGHALARAFAASDCRVVATGRSK----ATMADLEQDP-RFFVQELDVLSEQSVQNVLSN 59
           GIG A A   A +   V    R+       +A++            D+    +V + + +
Sbjct: 382 GIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKD 441

Query: 60  VLEKFGKIDVLVNNAG-------VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM 112
           +L + G +D LVNNAG               +      E+T   N FG +RL+  ++PHM
Sbjct: 442 ILAEHGHVDYLVNNAGRSIRRSVENSTDRFHD-----YERTMAVNYFGAVRLILGLLPHM 496

Query: 113 AYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDT 151
             R+ G ++NV S+ V    P    Y ASKAAL + +D 
Sbjct: 497 RERRFGHVVNVSSIGVQTNAPRFSAYVASKAALDAFSDV 535

Length = 657

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 90.4 bits (225), Expect = 5e-23
 Identities = 50/154 (32%), Positives = 73/154 (47%), Gaps = 15/154 (9%)

Query: 5   GIGHALARAFAAS-DCRVVATGRS----KATMADLEQ---DPRFFVQELDVLSEQSVQNV 56
           GIG  + R  A S    V+ T R     +A +  L       RF   +LDV  + S++  
Sbjct: 11  GIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRF--HQLDVTDDASIEAA 68

Query: 57  LSNVLEKFGKIDVLVNNAGVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
              V EK+G +D+LVNNAG+       +        +T  TN FG + + QA++P +   
Sbjct: 69  ADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGTVDVTQALLPLLKKS 128

Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLT 149
             G+I+NV S      G     Y  SKAAL++LT
Sbjct: 129 PAGRIVNVSSGL----GSLTSAYGVSKAALNALT 158

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 90.5 bits (225), Expect = 5e-23
 Identities = 56/162 (34%), Positives = 76/162 (46%), Gaps = 8/162 (4%)

Query: 4   GGIGHALARAFAASDC-RVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNV 60
            GIG A   +  A    +V A  R   + A L      +     LDV   +S+       
Sbjct: 13  RGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYGDKVVPLRLDVTDPESI----KAA 68

Query: 61  LEKFGKIDVLVNNAGVQCV-GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
             +   +DV++NNAGV      L E  L A++Q  + NVFG +RL QA  P +     G 
Sbjct: 69  AAQAKDVDVVINNAGVLKPATLLEEGALEALKQEMDVNVFGLLRLAQAFAPVLKANGGGA 128

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           I+N+ SV      P  GTY+ASK+A +SLT  LR EL   G 
Sbjct: 129 IVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAELAAQGT 170

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 90.1 bits (224), Expect = 7e-23
 Identities = 49/165 (29%), Positives = 76/165 (46%), Gaps = 10/165 (6%)

Query: 5   GIGHALARAFAASDCRVVATGR-----SKATMADLEQD-PRFFVQELDVLSEQSVQNVLS 58
           GIG A+A   A     VV   R     +    A++E+   +  V   DV   Q V+ + +
Sbjct: 9   GIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADVSQPQDVEEMFA 68

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
            V E+FG++DVLV+NA      PL+E+  +  +   NTN+   +   Q     M  R  G
Sbjct: 69  AVKERFGRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALVHCAQQAAKLMRERGGG 128

Query: 119 KIINVGSVTVAAPGPWAGTYT--ASKAALHSLTDTLRLELGHFGI 161
           +I+ + S  + +            +KAAL +L   L +ELG  GI
Sbjct: 129 RIVAISS--LGSIRALPNYLAVGTAKAALEALVRYLAVELGPRGI 171

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 90.5 bits (225), Expect = 9e-23
 Identities = 59/164 (35%), Positives = 76/164 (46%), Gaps = 7/164 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKA----TMADLEQDPRFFVQELDVLSEQSVQNVLSN 59
            GIG A+A AFA +  RV     S+A    T A L           DV     V+ V   
Sbjct: 21  SGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATV-ADVADPAQVERVFDT 79

Query: 60  VLEKFGKIDVLVNNAGVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM-AYRKK 117
            +E+FG +DVLVNNAG+    G + E+     EQT   N+ G     +A VP + A    
Sbjct: 80  AVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHG 139

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G II + SV      P    Y ASK A+  L  +L +ELG  GI
Sbjct: 140 GVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELGPLGI 183

Length = 264

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 89.8 bits (223), Expect = 1e-22
 Identities = 47/175 (26%), Positives = 72/175 (41%), Gaps = 19/175 (10%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRF------------------FVQELD 46
           GIG A+A   A +   VV   ++ A+  D                             +D
Sbjct: 14  GIGRAIALRLAKAGATVVVAAKT-ASEGDNGSAKSLPGTIEETAEEIEAAGGQALPIVVD 72

Query: 47  VLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQ 106
           V  E  V+ ++   +++FG++D+LVNNAG   +  + + P    +     N+ G   L Q
Sbjct: 73  VRDEDQVRALVEATVDQFGRLDILVNNAGAIWLSLVEDTPAKRFDLMQRVNLRGTYLLSQ 132

Query: 107 AVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           A +PHM    +G I+N+       P      Y A KA +  LT  L  EL   GI
Sbjct: 133 AALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGMSRLTLGLAAELRRHGI 187

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 89.6 bits (223), Expect = 2e-22
 Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 7/163 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           GIG ALAR +A     +    R     +A  A L +  R  V   DV    ++    ++ 
Sbjct: 13  GIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADF 72

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVP--LSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
           +   G  DV++ NAG+  VG L E    L+   +  +TN FG +   Q  +  M   ++G
Sbjct: 73  IAAHGLPDVVIANAGIS-VGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRG 131

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            ++ + SV      P AG Y+ASKAA     ++LR+EL   G+
Sbjct: 132 TLVGIASVAGVRGLPGAGAYSASKAAAIKYLESLRVELRPAGV 174

Length = 257

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 89.0 bits (221), Expect = 2e-22
 Identities = 53/157 (33%), Positives = 72/157 (45%), Gaps = 6/157 (3%)

Query: 5   GIGHALARAFAASDCRVVATGR----SKATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           G+G A AR   A   +VV +       +A  A+L    RFF   LDV  E     V+   
Sbjct: 16  GLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDAARFF--HLDVTDEDGWTAVVDTA 73

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
            E FG++DVLVNNAG+   G +    L    +  + N+ G     +AV+P M     G I
Sbjct: 74  REAFGRLDVLVNNAGILTGGTVETTTLEEWRRLLDINLTGVFLGTRAVIPPMKEAGGGSI 133

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG 157
           IN+ S+      P    Y ASK A+  LT +  LE  
Sbjct: 134 INMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECA 170

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 89.0 bits (221), Expect = 3e-22
 Identities = 51/160 (31%), Positives = 72/160 (45%), Gaps = 3/160 (1%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDP--RFFVQELDVLSEQSVQNVLSNVLE 62
           G G  +AR FA    RVV    +      +  D        + DV     V+ ++   L 
Sbjct: 16  GFGEGIARRFAQEGARVVIADINADGAERVAADIGEAAIAIQADVTKRADVEAMVEAALS 75

Query: 63  KFGKIDVLVNNAGVQCV-GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
           KFG++D+LVNNAG+     P+ EV     ++ F  NV       QA+VPHM  +  G II
Sbjct: 76  KFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIYLSAQALVPHMEEQGGGVII 135

Query: 122 NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           N+ S     P P    Y ASK  + + T  + +EL    I
Sbjct: 136 NIASTAGLRPRPGLTWYNASKGWVVTATKAMAVELAPRNI 175

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 91.8 bits (228), Expect = 3e-22
 Identities = 49/163 (30%), Positives = 72/163 (44%), Gaps = 5/163 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVL 61
           GGIG A  + FA +  +VV   R+     +      P      +DV  E  ++     + 
Sbjct: 15  GGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLH 74

Query: 62  EKFGKIDVLVNNAGVQ--CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
            +FG+IDVLVNNAGV    +    +  L    +    N+ G   + +  +  M  +  G 
Sbjct: 75  REFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGA 134

Query: 120 -IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            I+NV S       P    Y+ASKAA+ SLT +L  E    GI
Sbjct: 135 AIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGI 177

Length = 520

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 89.1 bits (221), Expect = 3e-22
 Identities = 54/174 (31%), Positives = 78/174 (44%), Gaps = 17/174 (9%)

Query: 5   GIGHALARAFAASD------CRVVATGRS--KATMADLE--------QDPRFFVQELDVL 48
           G  HA+  A   +D      C  ++   +   AT  DL+           +   ++ DV 
Sbjct: 16  GRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLVEALGRKVLARKADVR 75

Query: 49  SEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAV 108
               V+ V+ + +E+FG++DV+V NAGV   G   E+     +   + N+ G  R  +AV
Sbjct: 76  DLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWELSEEQWDTVLDINLTGVWRTCKAV 135

Query: 109 VPHMAYRKK-GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           VPHM  R   G II   SV      P    Y A+K  L  LT TL  EL  +GI
Sbjct: 136 VPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLVGLTKTLANELAEYGI 189

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 88.5 bits (220), Expect = 3e-22
 Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 8/160 (5%)

Query: 5   GIGHALARAFAA--SDCRVVATGRS----KATMADLEQDPRFFVQELDVLSEQSVQNVLS 58
           GIG ALA       S   VV   RS    +    +L    R    + D+     V+ +L 
Sbjct: 10  GIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELRPGLRVTTVKADLSDAAGVEQLLE 69

Query: 59  NVLEKFGKIDVLVNNAGV-QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMA-YRK 116
            + +  G+ D+L+NNAG    V  +  + L  +++ F+ N+  P+ L   ++        
Sbjct: 70  AIRKLDGERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSPVCLTSTLLRAFKKRGL 129

Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
           K  ++NV S     P    G Y +SKAA       L  E 
Sbjct: 130 KKTVVNVSSGAAVNPFKGWGLYCSSKAARDMFFRVLAAEE 169

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 88.4 bits (220), Expect = 4e-22
 Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 7/165 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRS----KATMADLEQDP--RFFVQELDVLSEQSVQNVL 57
            GIG A+A+AFA     V   GR     +A   ++      R    + DV   ++V+  +
Sbjct: 13  TGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQCDVRDPEAVEAAV 72

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH-MAYRK 116
              L++FGKID+L+NNA    + P   +  +  +   + ++ G     +AV    +  + 
Sbjct: 73  DETLKEFGKIDILINNAAGNFLAPAESLSPNGFKTVIDIDLNGTFNTTKAVGKRLIEAKH 132

Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            G I+N+ +       P+     A+KA + +LT +L +E G +GI
Sbjct: 133 GGSILNISATYAYTGSPFQVHSAAAKAGVDALTRSLAVEWGPYGI 177

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 89.8 bits (223), Expect = 5e-22
 Identities = 55/160 (34%), Positives = 75/160 (46%), Gaps = 5/160 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPR-----FFVQELDVLSEQSVQNVLSN 59
           GIG A A AFA    R+V   R +  +  + ++ R       V   DV     V+ + + 
Sbjct: 18  GIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQ 77

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
                G+IDV VNN GV  VG   E P+ A EQ   TN+ G MR   A +P    +  G 
Sbjct: 78  AASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGI 137

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHF 159
            IN+ S+   A  P+A  Y+ASK  L   ++ LR EL   
Sbjct: 138 FINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGELADH 177

Length = 330

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 88.1 bits (219), Expect = 5e-22
 Identities = 58/159 (36%), Positives = 79/159 (49%), Gaps = 4/159 (2%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATM--ADLEQDPRFFVQELDVLSEQSVQNVLSNVLE 62
           GIG   AR F A   RV  TGR  A++  A  E      V   D     + + +   + E
Sbjct: 17  GIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAE 76

Query: 63  KFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIIN 122
            FG++D +  NAGV    PL +   +  +++FNTNV GP  L+QA++P +A      I+ 
Sbjct: 77  AFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLA--NPASIVL 134

Query: 123 VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            GS+      P +  Y ASKAAL SL  TL  EL   GI
Sbjct: 135 NGSINAHIGMPNSSVYAASKAALLSLAKTLSGELLPRGI 173

Length = 249

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 87.7 bits (218), Expect = 6e-22
 Identities = 48/167 (28%), Positives = 70/167 (41%), Gaps = 11/167 (6%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQD--PRFFVQELDVLSEQSVQNVLS 58
           GIG A A   A     V+   R+     A   ++E+           D  +   +   + 
Sbjct: 12  GIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAADFSAGDDIYERIE 71

Query: 59  NVLEKFGK-IDVLVNNAGV--QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
             LE  G  I +LVNN G+         E P   ++   N NV   +++ + ++P M  R
Sbjct: 72  KELE--GLDIGILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLKMTRLILPGMVKR 129

Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           KKG I+N+ S     P P   TY+ASKA L   +  L  E    GID
Sbjct: 130 KKGAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEEYKSQGID 176

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 88.1 bits (219), Expect = 7e-22
 Identities = 57/169 (33%), Positives = 77/169 (45%), Gaps = 14/169 (8%)

Query: 5   GIGHALARAFAASDCRVVATGR-------SKATMADLEQDPRFFVQELDVLSEQSVQNVL 57
           G+G  +A A   +  RVV + R       + A +  L  D  +     DV  E  ++ + 
Sbjct: 23  GLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAA--DVADEADIERLA 80

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH-MAYRK 116
              LE+FG +D+LVNNAG     P  + P+ A ++  N NV G   L QAV    M  R 
Sbjct: 81  EETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG 140

Query: 117 KGKIINVGSVTVAAPGP--WAGT--YTASKAALHSLTDTLRLELGHFGI 161
            G+IINV SV      P     T  Y  SK A+ + T  L  E G  GI
Sbjct: 141 YGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHGI 189

Length = 259

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 88.0 bits (218), Expect = 8e-22
 Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 6/151 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           GIG A+          V+     + +  D++    +F  ++DV +++ V   +  V+ K+
Sbjct: 17  GIGKAVVNRLKEEGSNVINFDIKEPSYNDVD----YF--KVDVSNKEQVIKGIDYVISKY 70

Query: 65  GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG 124
           G+ID+LVNNAG++  G +  V     ++  N NV G   + +  +P+M  + KG IIN+ 
Sbjct: 71  GRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIA 130

Query: 125 SVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
           SV   A    A  Y  SK A+  LT ++ ++
Sbjct: 131 SVQSFAVTRNAAAYVTSKHAVLGLTRSIAVD 161

Length = 258

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 87.1 bits (216), Expect = 1e-21
 Identities = 52/155 (33%), Positives = 76/155 (49%), Gaps = 6/155 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADL-EQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
           GIG A  +A A +  RVVA  R++A +  L  + P      +D+    + +  L +V   
Sbjct: 18  GIGRATVKALAKAGARVVAVSRTQADLDSLVRECPGIEPVCVDLSDWDATEEALGSV--- 74

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIIN 122
            G +D+LVNNA V  + P  EV   A +++F+ NV   + + Q V   M  R   G I+N
Sbjct: 75  -GPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVIHVSQIVARGMIARGVPGSIVN 133

Query: 123 VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG 157
           V S            Y ++KAAL  LT  + LELG
Sbjct: 134 VSSQASQRALTNHTVYCSTKAALDMLTKVMALELG 168

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 87.5 bits (217), Expect = 2e-21
 Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 8/166 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVLSN 59
           GIG A A  FA     VVA  R +  +  +                D+    +V  ++++
Sbjct: 51  GIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVAD 110

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEV--PLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
           V ++ G +D+L+NNAG     PLAE       +E+T   N + P+RL++ + P M  R  
Sbjct: 111 VEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGD 170

Query: 118 GKIINVGSVTV-AAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           G IINV +  V +   P    Y ASKAAL +++  +  E G  G+ 
Sbjct: 171 GHIINVATWGVLSEASPLFSVYNASKAALSAVSRVIETEWGDRGVH 216

Length = 293

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 87.0 bits (216), Expect = 2e-21
 Identities = 55/173 (31%), Positives = 79/173 (45%), Gaps = 23/173 (13%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFF--VQEL------------DVLS 49
            GIG A+A   AA    +V        +ADL  +      +QE+            DV  
Sbjct: 12  QGIGRAIAERLAADGFNIV--------LADLNLEEAAKSTIQEISEAGYNAVAVGADVTD 63

Query: 50  EQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVV 109
           +  V+ ++   +EKFG  DV+VNNAG+  + PL  +    +++ +  NVFG +  +QA  
Sbjct: 64  KDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTITEEDLKKVYAVNVFGVLFGIQAAA 123

Query: 110 PHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
                    GKIIN  S+      P  G Y+ASK A+  LT T   EL   GI
Sbjct: 124 RQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKGI 176

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 87.0 bits (216), Expect = 2e-21
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 11/154 (7%)

Query: 5   GIGHALARAFAASDCR-VVATGRSK-------ATMADLEQDPRFFVQELDVLSEQSVQNV 56
           G+G A+ARAFA      +V  GR+        A +  L     F   + D+   +  + V
Sbjct: 17  GLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFV--QADLSDVEDCRRV 74

Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
           ++   E FG++D LVN AG+   G + +      ++ F  NV  P  L+Q  +  M  RK
Sbjct: 75  VAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRK 134

Query: 117 -KGKIINVGSVTVAAPGPWAGTYTASKAALHSLT 149
            +G I+N+GS++     P+   Y ASK AL +LT
Sbjct: 135 AEGTIVNIGSMSAHGGQPFLAAYCASKGALATLT 168

Length = 260

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 86.7 bits (215), Expect = 2e-21
 Identities = 52/161 (32%), Positives = 75/161 (46%), Gaps = 4/161 (2%)

Query: 5   GIGHALARAFAASDCRVVATGRSKA----TMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           GIG A A+ FA    RVV   R         A +    R F ++ DV S ++V+ ++  V
Sbjct: 16  GIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFV 75

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
             ++G++DVLVNNAG  C G +     +  +     NV G     +  +P M  +  G I
Sbjct: 76  AARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSI 135

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +N  S    A G     Y ASK A+ SLT  + L+    GI
Sbjct: 136 VNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGI 176

Length = 252

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 86.7 bits (215), Expect = 2e-21
 Identities = 51/172 (29%), Positives = 76/172 (44%), Gaps = 21/172 (12%)

Query: 5   GIGHALARAFAASDCRVV-----ATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSN 59
           G+G A+AR+FA    RVV     +T  ++A  A+  +  R    + DV     VQ ++  
Sbjct: 11  GLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGE--RAIAIQADVRDRDQVQAMIEE 68

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPL---SAMEQT-------FNTNVFGPMRLVQAVV 109
               FG +D +VNNA    +      P    +                V G + L+QAV+
Sbjct: 69  AKNHFGPVDTIVNNA----LIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGALNLLQAVL 124

Query: 110 PHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           P    R  G++IN+G+     P      YT +KAAL   T  +  ELG +GI
Sbjct: 125 PDFKERGSGRVINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKELGPYGI 176

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 86.7 bits (215), Expect = 2e-21
 Identities = 58/162 (35%), Positives = 80/162 (49%), Gaps = 6/162 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQ---DPRFFVQELDVLSEQSVQNVLSNV 60
           GGIG ALAR F A+  RV+A     A +A       D RF     D+    S+   L+N 
Sbjct: 12  GGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANA 71

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
             + G +DVLV NAG      L +   ++       N+      V+AV+  M  R +G +
Sbjct: 72  AAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAV 131

Query: 121 INVGSVT-VAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +N+GSV  +AA G  A  Y+A+KA L   T  L +E G FGI
Sbjct: 132 VNIGSVNGMAALGHPA--YSAAKAGLIHYTKLLAVEYGRFGI 171

Length = 257

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 86.3 bits (214), Expect = 3e-21
 Identities = 57/164 (34%), Positives = 80/164 (48%), Gaps = 7/164 (4%)

Query: 1   CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           CS G IG   A        RV+A  R    +A +     F    LD+   +SV+     V
Sbjct: 10  CSSG-IGLEAALELKRRGYRVLAACRKPDDVARMNS-LGFTGILLDLDDPESVERAADEV 67

Query: 61  LE-KFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
           +     ++  L NNAG    GPL+ +    MEQ F+TN FG  +L   ++P M    +G+
Sbjct: 68  IALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGR 127

Query: 120 IINVGSVT--VAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           I+   SV   ++ PG   G Y ASK AL + +D LR+EL H GI
Sbjct: 128 IVMTSSVMGLISTPG--RGAYAASKYALEAWSDALRMELRHSGI 169

Length = 256

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 85.8 bits (213), Expect = 3e-21
 Identities = 56/160 (35%), Positives = 74/160 (46%), Gaps = 15/160 (9%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           GIG A ARAF A   +V   G  K    DL  +  F    LD+  +      L  + +  
Sbjct: 16  GIGLAQARAFLAQGAQVY--GVDKQDKPDLSGNFHFLQ--LDLSDD------LEPLFDWV 65

Query: 65  GKIDVLVNNAGV-QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
             +D+L N AG+     PL +  L   +  F+TN+     L +A +P M  RK G IIN+
Sbjct: 66  PSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINM 125

Query: 124 GSVT--VAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            S+   VA  G  A  YTASK AL   T  L L+    GI
Sbjct: 126 CSIASFVAGGGGAA--YTASKHALAGFTKQLALDYAKDGI 163

Length = 235

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 86.2 bits (214), Expect = 4e-21
 Identities = 54/167 (32%), Positives = 75/167 (44%), Gaps = 7/167 (4%)

Query: 2   SQGGIGHALARAFAASDCRVVATGRS-----KATMADLEQD-PRFFVQELDVLSEQSVQN 55
           S  GIG A A   A     +  T  S     K T  ++     R  +++LD+        
Sbjct: 10  SDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQ 69

Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM-AY 114
            L  ++++ G+IDVLVNNAG     P  ++      + F  +V G     Q    HM   
Sbjct: 70  ALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQ 129

Query: 115 RKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            + G+IIN+ SV    P P A  YTA+K AL  LT  + LEL   GI
Sbjct: 130 GQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELVEHGI 176

Length = 256

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 85.8 bits (213), Expect = 4e-21
 Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 12/164 (7%)

Query: 4   GGIGHALARAFAASDCRVV------ATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVL 57
            GIG A A+       +V         G +    A   +    FVQ  DV S + +    
Sbjct: 10  SGIGLATAKLLLKKGAKVAILDRNENPGAAAELQAINPKVKATFVQ-CDVTSWEQLAAAF 68

Query: 58  SNVLEKFGKIDVLVNNAGV--QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
              +EKFG++D+L+NNAG+  +     A       E+T + N+ G +      + +M   
Sbjct: 69  KKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTTYLALHYMDKN 128

Query: 116 KKGK---IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
           K GK   I+N+GSV    P P    Y+ASK  +   T +L   L
Sbjct: 129 KGGKGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLL 172

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 86.0 bits (213), Expect = 4e-21
 Identities = 50/157 (31%), Positives = 86/157 (54%), Gaps = 7/157 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLE 62
           G G  + R F     +V+ATGR +  + +L+ +     ++ +LDV +  +++ +L+++  
Sbjct: 11  GFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPA 70

Query: 63  KFGKIDVLVNNAGVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
           ++  IDVLVNNAG+   + P  +  +   E   +TN  G + + +AV+P M  R  G II
Sbjct: 71  EWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHII 130

Query: 122 NVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLEL 156
           N+GS   A   P+AG   Y A+KA +   +  LR +L
Sbjct: 131 NIGS--TAGSWPYAGGNVYGATKAFVRQFSLNLRTDL 165

Length = 248

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 85.6 bits (212), Expect = 4e-21
 Identities = 55/161 (34%), Positives = 75/161 (46%), Gaps = 3/161 (1%)

Query: 4   GGIGHALARAFAASDCRVVAT--GRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVL 61
            GIG A A   A    RVV        A     +         +DV  EQ V  +    +
Sbjct: 13  AGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGALALRVDVTDEQQVAALFERAV 72

Query: 62  EKFGKIDVLVNNAGVQCVGP-LAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
           E+FG +D+LVNNAG   + P + +  L+  +QT   N+ G     +   P M  R  G I
Sbjct: 73  EEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLCCRHAAPRMIARGGGSI 132

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +N+ S+   +  P  G Y ASKAA+ +LT TL  EL H GI
Sbjct: 133 VNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGI 173

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 85.6 bits (212), Expect = 5e-21
 Identities = 52/167 (31%), Positives = 71/167 (42%), Gaps = 13/167 (7%)

Query: 4   GGIGHALARAFAASDCRVVATGR----SKATMADLEQD--PRFFVQELDVLSEQSVQNVL 57
           GGIG A A A A     VV        ++     +  D      VQ +DV    S + + 
Sbjct: 16  GGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQ-VDVSDPDSAKAMA 74

Query: 58  SNVLEKFGKIDVLVNNA---GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY 114
              +  FG ID LVNNA   G   +  L  VP    ++  + N+ G +   +AV  HMA 
Sbjct: 75  DATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAK 134

Query: 115 RKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           R  G I+N  S    A   ++  Y  +K  L+ LT  L  ELG   I
Sbjct: 135 RGGGAIVNQSS---TAAWLYSNFYGLAKVGLNGLTQQLARELGGMNI 178

Length = 250

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 85.3 bits (212), Expect = 7e-21
 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 9/164 (5%)

Query: 5   GIGHALARAFAASDCRVVATGR-----SKATMADLEQDPRFFVQELDVLSEQSVQNVLSN 59
           GIG  +A A A    +VV         + A  A  +   +     +DV  E+++   +  
Sbjct: 15  GIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDY 74

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
            +E FG +D+LVNNAG+Q V P+ + P    ++     + G     +A +P M  +  G+
Sbjct: 75  AVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGR 134

Query: 120 IINVGSVT--VAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           IIN+ SV   V + G  A  Y ++K  L  LT  + LE    G+
Sbjct: 135 IINMASVHGLVGSAGKAA--YVSAKHGLIGLTKVVALEGATHGV 176

Length = 258

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 84.6 bits (210), Expect = 1e-20
 Identities = 49/160 (30%), Positives = 75/160 (46%), Gaps = 7/160 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           GIG A       +  RVV T RS+        +   FV   D+ + +    V   VLE+ 
Sbjct: 20  GIGAATVARLLEAGARVVTTARSRPDDLP---EGVEFVAA-DLTTAEGCAAVARAVLERL 75

Query: 65  GKIDVLVNNAG--VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIIN 122
           G +D+LV+  G      G  A +     +   N N+   +RL +A++P M  R  G II+
Sbjct: 76  GGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIH 135

Query: 123 VGSVTVAAPGPWAGT-YTASKAALHSLTDTLRLELGHFGI 161
           V S+    P P + T Y A+KAAL + + +L  E+   G+
Sbjct: 136 VTSIQRRLPLPESTTAYAAAKAALSTYSKSLSKEVAPKGV 175

Length = 260

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 84.8 bits (210), Expect = 1e-20
 Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 2/160 (1%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLE 62
           G G  +     A   RV AT R    + DL+     R +V +LDV    +V+ V+     
Sbjct: 13  GFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFA 72

Query: 63  KFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIIN 122
             G+IDV+V+NAG    G   E+  + + +  +TN+ G +++++A +PH+  +  G+I+ 
Sbjct: 73  ALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQ 132

Query: 123 VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           V S       P    Y A+K  +    + +  E+  FGI+
Sbjct: 133 VSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVAPFGIE 172

Length = 276

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 84.0 bits (208), Expect = 2e-20
 Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 8/157 (5%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           GIG AL+   A    +V+   RS       +  P       D+   +     L+ + E  
Sbjct: 14  GIGLALSLRLANLGHQVIGIARSAI-----DDFPGELFA-CDLADIEQTAATLAQINEIH 67

Query: 65  GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG 124
             +D +VNN G+    PL ++ L+A++  ++ NV   +++ QA +  M  R++G+I+N+ 
Sbjct: 68  P-VDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNIC 126

Query: 125 SVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           S  +        +Y+A+K+AL   T T  LEL  +GI
Sbjct: 127 SRAIFG-ALDRTSYSAAKSALVGCTRTWALELAEYGI 162

Length = 234

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 83.9 bits (208), Expect = 3e-20
 Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 10/167 (5%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMAD----LEQD--PRFFVQELDVLSEQSVQNVL 57
            GIG A+ARA A +   V     S     +    L +    +    + DV S++SV+   
Sbjct: 18  RGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYKCDVSSQESVEKTF 77

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             + + FGKID+L+ NAG+    P  +       +  + N+ G     QA       + K
Sbjct: 78  KQIQKDFGKIDILIANAGITVHKPALDYTYEQWNKVIDVNLNGVFNCAQAAAKIFKKQGK 137

Query: 118 GKIINVGSVT---VAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G +I   S++   V  P P A  Y ASKAA+  L  +L +E   + I
Sbjct: 138 GSLIITASMSGTIVNRPQPQA-AYNASKAAVIHLAKSLAVEWAKYFI 183

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 82.9 bits (205), Expect = 3e-20
 Identities = 49/159 (30%), Positives = 69/159 (43%), Gaps = 2/159 (1%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADL--EQDPRFFVQELDVLSEQSVQNVLSNVLE 62
           GIG A AR   A   RV    R +A +A    ++         DV  E  V+  +  + E
Sbjct: 11  GIGEATARLLHAEGYRVGICARDEARLAAAAAQELEGVLGLAGDVRDEADVRRAVDAMEE 70

Query: 63  KFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIIN 122
            FG +D LVNNAGV  + P+ E+         +TN+ G    +    P +  R  G I+N
Sbjct: 71  AFGGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAAPALLRRGGGTIVN 130

Query: 123 VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           VGS+           Y ASK  L  L++   L+L    I
Sbjct: 131 VGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANI 169

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 83.4 bits (206), Expect = 3e-20
 Identities = 52/156 (33%), Positives = 75/156 (48%), Gaps = 5/156 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPR---FFVQELDVLSEQSVQNVLSNVL 61
           GIG  +   F  +  +VV     +   AD  +      FFV   DV  E  V+ V+  +L
Sbjct: 12  GIGKQICLDFLEAGDKVVFADIDEERGADFAEAEGPNLFFVH-GDVADETLVKFVVYAML 70

Query: 62  EKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
           EK G+IDVLVNNA     G L+ + L   ++  + N+ GP  L +     +  + KG+II
Sbjct: 71  EKLGRIDVLVNNAARGSKGILSSLLLEEWDRILSVNLTGPYELSRYCRDELI-KNKGRII 129

Query: 122 NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG 157
           N+ S       P +  Y ASK  L +LT  L + LG
Sbjct: 130 NIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLG 165

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 83.3 bits (206), Expect = 3e-20
 Identities = 56/163 (34%), Positives = 77/163 (47%), Gaps = 8/163 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMAD------LEQDPRFFVQELDVLSEQSVQNVLS 58
           GIG A+AR  AA    V       A  AD           R    + DV    +V  +  
Sbjct: 16  GIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFD 75

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
                FG+IDVLVNNAGV  +G +A+  L   ++T  TN+ G   +++    H+   + G
Sbjct: 76  AAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHL--GQGG 133

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +IIN+ +  +A P P  G Y ASKAA+  L   L  EL   GI
Sbjct: 134 RIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELRGRGI 176

Length = 245

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 83.2 bits (206), Expect = 4e-20
 Identities = 51/165 (30%), Positives = 76/165 (46%), Gaps = 8/165 (4%)

Query: 4   GGIGHALARAFAASDCRVVAT-----GRSKATMADLE-QDPRFFVQELDVLSEQSVQNVL 57
           GGIG A+ +  A    RV A       R++A + +       F V E DV S +S +  +
Sbjct: 10  GGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAV 69

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
           + V  + G IDVLVNNAG+       ++         +TN+     + Q V+  M  R  
Sbjct: 70  AKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGW 129

Query: 118 GKIINVGSVTVAAPGPWAGT-YTASKAALHSLTDTLRLELGHFGI 161
           G+IIN+ SV     G +  T Y+A+KA +   T  L  E    G+
Sbjct: 130 GRIINISSVN-GQKGQFGQTNYSAAKAGMIGFTKALAQEGATKGV 173

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 83.4 bits (206), Expect = 4e-20
 Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 6/162 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADL-----EQDPRFFVQELDVLSEQSVQNVLSN 59
           GIG  +A  FA +   VV +  +      +     +   + F    D+ SEQ +  +   
Sbjct: 22  GIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADF 81

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
            L K GK+D+LVNNAG     P  ++P++   + +  NVF    L Q V P M     G 
Sbjct: 82  ALSKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGV 140

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           I+ + S+          +Y +SKAA   L   +  +LG   I
Sbjct: 141 ILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNI 182

Length = 255

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 83.1 bits (205), Expect = 5e-20
 Identities = 53/166 (31%), Positives = 87/166 (52%), Gaps = 7/166 (4%)

Query: 2   SQGGIGHALARAFAASDCRVVAT----GRSKATMADLEQDPRFFVQELDVLSEQSVQNVL 57
           S  GIG A A+A+     RV         ++AT A++   P      LDV  + S+   +
Sbjct: 11  SARGIGRAFAQAYVREGARVAIADINLEAARATAAEIG--PAACAISLDVTDQASIDRCV 68

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-K 116
           + +++++G ID+LVNNA +  + P+ ++   + ++ F  NV G + ++QAV   M  + +
Sbjct: 69  AALVDRWGSIDILVNNAALFDLAPIVDITRESYDRLFAINVSGTLFMMQAVARAMIAQGR 128

Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
            GKIIN+ S          G Y A+KAA+ SLT +  L L   GI+
Sbjct: 129 GGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGIN 174

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 82.5 bits (204), Expect = 7e-20
 Identities = 57/166 (34%), Positives = 77/166 (46%), Gaps = 11/166 (6%)

Query: 4   GGIGHALARAFAASDCRVV----ATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSN 59
            GIG A AR FA    RVV         +A  A+L      FV   DV  E  V+  +  
Sbjct: 14  SGIGEATARLFAKHGARVVIADIDDDAGQAVAAELGDPDISFVH-CDVTVEADVRAAVDT 72

Query: 60  VLEKFGKIDVLVNNAGVQCVGP----LAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
            + +FG++D++ NNAGV  +G     + E  L   E+  + NV+G     +     M   
Sbjct: 73  AVARFGRLDIMFNNAGV--LGAPCYSILETSLEEFERVLDVNVYGAFLGTKHAARVMIPA 130

Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           KKG I++V SV     G     YTASK A+  LT +   ELG  GI
Sbjct: 131 KKGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATELGEHGI 176

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 82.4 bits (204), Expect = 8e-20
 Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 38/179 (21%)

Query: 5   GIGHALARAFAAS------------DCRVVAT------GRSKAT---MADLEQDPRFFVQ 43
           GIG A+A+  A               C+ VA       G+++A    + ++EQ       
Sbjct: 19  GIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQ------- 71

Query: 44  ELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ-CVGPLAEVPLSAMEQTFNTNVFGPM 102
                    +  + +++ E+ G++D+LVNNA      G + +  L A ++T + N+ G  
Sbjct: 72  ---------IDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYF 122

Query: 103 RLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            +       M  +  G I+NV SV   +PG + G Y+ +KAA+ S+T     E   FGI
Sbjct: 123 FMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAPFGI 181

Length = 252

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 82.5 bits (204), Expect = 9e-20
 Identities = 56/164 (34%), Positives = 80/164 (48%), Gaps = 9/164 (5%)

Query: 5   GIGHALARAFAASDCRVVATGRSKAT--MAD--LEQDPRFFVQELDVLSEQSVQNVLSNV 60
           GIG  +AR FA     ++    S     +AD    +  R      DV    SV   +   
Sbjct: 17  GIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRA 76

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
            EK G+ID+LVNNAGV  +G   ++     +   + N+ G   + +AV+P M  RK G+I
Sbjct: 77  KEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRI 136

Query: 121 INVGSVT---VAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           + + SVT   VA PG  A  Y  +KAA+  LT +L +E    GI
Sbjct: 137 VMMSSVTGDMVADPGETA--YALTKAAIVGLTKSLAVEYAQSGI 178

Length = 263

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 82.2 bits (203), Expect = 1e-19
 Identities = 52/163 (31%), Positives = 77/163 (47%), Gaps = 6/163 (3%)

Query: 5   GIGHALARAFAASDCRVVATG----RSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSN 59
           GIG A+A   A +   VV        ++A  A ++Q   +    E +V SEQ ++ V+  
Sbjct: 10  GIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSEQDLEAVVKA 69

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLA-EVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
            + +FG I +LVNNAG     P    +     E  F  N+F   RL Q   PHM     G
Sbjct: 70  TVSQFGGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQLCAPHMQKAGGG 129

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            I+N+ S++          Y +SKAA++ +T  L  +LG  GI
Sbjct: 130 AILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGI 172

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 82.2 bits (203), Expect = 1e-19
 Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 10/163 (6%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADL------EQDPRFFVQELDVLSEQSVQNVL 57
            GIG A+ARA      +VV   R    +  L         P  F  + D+ +E+ + ++ 
Sbjct: 16  VGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFPYQCDLSNEEQILSMF 75

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK- 116
           S +  +   +DV +NNAG+    PL        ++ F+ NV       +     M  R  
Sbjct: 76  SAIRTQHQGVDVCINNAGLARPEPLLSGKTEGWKEMFDVNVLALSICTREAYQSMKERNV 135

Query: 117 -KGKIINVGSVT--VAAPGPWAGTYTASKAALHSLTDTLRLEL 156
             G IIN+ S++     P      Y A+K A+ +LT+ LR EL
Sbjct: 136 DDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQEL 178

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 82.0 bits (203), Expect = 1e-19
 Identities = 43/176 (24%), Positives = 66/176 (37%), Gaps = 16/176 (9%)

Query: 2   SQGGIGHALARAFAASDCRVVAT---GRSKATMADLEQDPRFFVQ-------------EL 45
              GIG A+ R  AA    +  T      K     +       ++             E+
Sbjct: 15  RLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEI 74

Query: 46  DVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLV 105
           D+    +   V   V E+ G   +L+NNA       L E+    +++ +  NV   M L 
Sbjct: 75  DLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLS 134

Query: 106 QAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            A       +  G+IIN+ S     P P    Y A+K A+ + T +L  EL   GI
Sbjct: 135 SAFAKQYDGKAGGRIINLTSGQSLGPMPDELAYAATKGAIEAFTKSLAPELAEKGI 190

Length = 256

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 81.7 bits (202), Expect = 2e-19
 Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 11/169 (6%)

Query: 2   SQGGIGHALARAFAASDCRVVATG-----RSKATMADLEQDPRFFVQEL--DVLSEQSVQ 54
           S  GIG  +ARA AA+   +V  G       +A  A L       V     D+    +++
Sbjct: 10  STSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGADLSKPAAIE 69

Query: 55  NVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY 114
           ++++    +FG +D+LVNNAG+Q V P+ + P    +     N+       +  +PHM  
Sbjct: 70  DMVAYAQRQFGGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNLSAVFHTTRLALPHMKK 129

Query: 115 RKKGKIINVGSV--TVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +  G+IIN+ SV   VA+    A  Y A+K  +  LT  + LE    G+
Sbjct: 130 QGWGRIINIASVHGLVASANKSA--YVAAKHGVVGLTKVVALETAGTGV 176

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 81.7 bits (202), Expect = 2e-19
 Identities = 54/159 (33%), Positives = 78/159 (49%), Gaps = 2/159 (1%)

Query: 5   GIGHALARAFAASDCRVVATGRS-KATMADLEQDPRFFV-QELDVLSEQSVQNVLSNVLE 62
           G G+A+A A A +D  +   G +   T   +E++ R     ++D+   +S + V+   LE
Sbjct: 28  GQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALE 87

Query: 63  KFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIIN 122
           +FGKID+LVNNAG     PL E          + N+     L QAV   MA +  GKIIN
Sbjct: 88  EFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIIN 147

Query: 123 VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           + S+     G +   YTASK  +  LT     EL  + I
Sbjct: 148 IASMLSFQGGKFVPAYTASKHGVAGLTKAFANELAAYNI 186

Length = 258

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 80.8 bits (200), Expect = 2e-19
 Identities = 48/158 (30%), Positives = 66/158 (41%), Gaps = 6/158 (3%)

Query: 6   IGHALARAFAASDCRVVATGRSKATMAD-----LEQ-DPRFFVQELDVLSEQSVQNVLSN 59
           IG A+A A AA   RVV         A      L        + + D+    +  ++++ 
Sbjct: 12  IGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAVLVQADLSDFAACADLVAA 71

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
               FG+ DVLVNNA      PL +    A  + F  N+  P  L+QA    +A  + G 
Sbjct: 72  AFRAFGRCDVLVNNASAFYPTPLGQGSEDAWAELFGINLKAPYLLIQAFARRLAGSRNGS 131

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG 157
           IIN+       P      Y  SKAAL  LT +  LEL 
Sbjct: 132 IINIIDAMTDRPLTGYFAYCMSKAALEGLTRSAALELA 169

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 81.0 bits (200), Expect = 3e-19
 Identities = 55/172 (31%), Positives = 81/172 (47%), Gaps = 13/172 (7%)

Query: 4   GGIGHALARAFAASDCRVVATGRS----KATMADLE-QDPRFFVQELDVLSEQSVQNVLS 58
            G+G   A+  A +  +VV   R     K   A++E +     V  LDV   QS++  ++
Sbjct: 19  SGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVA 78

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
           +   + G ID+LVNN+GV     L +V  +  +  F+TN  G   + Q V   M  R KG
Sbjct: 79  HAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKG 138

Query: 119 --------KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
                   +IIN+ SV      P  G Y  SKAA+  +T  + LE G  GI+
Sbjct: 139 AGNTKPGGRIINIASVAGLRVLPQIGLYCMSKAAVVHMTRAMALEWGRHGIN 190

Length = 258

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 80.9 bits (200), Expect = 3e-19
 Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 19/170 (11%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQEL------------DVLSEQS 52
           G+G A+A  F     +VV   RS       E++     +E+            DV  E  
Sbjct: 18  GLGRAMAVRFGKEKAKVVINYRSD------EEEANDVAEEIKKAGGEAIAVKGDVTVESD 71

Query: 53  VQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM 112
           V N++   +++FG +DV++NNAG++   P  E+ L    +  NTN+ G     +  + + 
Sbjct: 72  VVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYF 131

Query: 113 A-YRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             +  KG IIN+ SV    P P    Y ASK  +  +T+TL +E    GI
Sbjct: 132 VEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAMEYAPKGI 181

Length = 261

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 81.8 bits (202), Expect = 7e-19
 Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 7/161 (4%)

Query: 5   GIGHALARAFAASDCRVV---ATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVL 61
           GIG A+A  FAA+  R++           +A+   D    VQ  D+  E +V++  + + 
Sbjct: 280 GIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQ-ADITDEAAVESAFAQIQ 338

Query: 62  EKFGKIDVLVNNAG-VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
            ++G++DVLVNNAG  +   P  E       + ++ N+ G     +A    M   + G I
Sbjct: 339 ARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLM--SQGGVI 396

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +N+GS+      P    Y ASKAA+  L+ +L  E    GI
Sbjct: 397 VNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGI 437

Length = 520

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 80.2 bits (198), Expect = 7e-19
 Identities = 52/162 (32%), Positives = 74/162 (45%), Gaps = 5/162 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPR-----FFVQELDVLSEQSVQNVLSN 59
           GIG A A   AA+   V    R      +L    R          LDV    SV++ ++ 
Sbjct: 21  GIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQ 80

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
             E  G+I+VLV+ AG    G L E+     E     ++ G  RL  AV+P M  R++G 
Sbjct: 81  AEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGD 140

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +I VGS       P  G Y A+KA L ++   L++EL   G+
Sbjct: 141 LIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQMELEGTGV 182

Length = 274

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 79.3 bits (196), Expect = 1e-18
 Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 19/177 (10%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATM----ADLEQDP--RFFVQELDVLSEQSVQNVL 57
           G IG A  +A  ++  R++    +   +     +L      R    ELD+ S++S++ ++
Sbjct: 12  GLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELDITSKESIKELI 71

Query: 58  SNVLEKFGKIDVLVNNAGV---QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY 114
            + LEKFG+ID+L+NNA            E P     +  N N+ G     QA +     
Sbjct: 72  ESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAFLCSQAFIKLFKK 131

Query: 115 RKKGKIINVGSVT-VAAP--------GPWAG-TYTASKAALHSLTDTLRLELGHFGI 161
           + KG IIN+ S+  V AP          ++   Y+  KA +  LT  L       GI
Sbjct: 132 QGKGSIINIASIYGVIAPDFRIYENTQMYSPVEYSVIKAGIIHLTKYLAKYYADTGI 188

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 78.6 bits (194), Expect = 2e-18
 Identities = 50/158 (31%), Positives = 71/158 (44%), Gaps = 5/158 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           GIG A A A A    RVVA  R+ A +  L  +       LDV  + +++  L+      
Sbjct: 20  GIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALA----AA 75

Query: 65  GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM-AYRKKGKIINV 123
           G  D LVN AG+  +    ++     ++    N  G   + + V   M A  + G I+NV
Sbjct: 76  GAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNV 135

Query: 124 GSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            S       P    Y ASKAAL ++T  L +ELG  GI
Sbjct: 136 SSQAALVGLPDHLAYCASKAALDAITRVLCVELGPHGI 173

Length = 245

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 78.2 bits (193), Expect = 3e-18
 Identities = 45/164 (27%), Positives = 66/164 (40%), Gaps = 7/164 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMAD-----LEQDP--RFFVQELDVLSEQSVQNVL 57
           GIG A       +   V   GR +  +A       E+ P  R      DVL E  V    
Sbjct: 19  GIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFA 78

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
           + V  +FG +D+LVNNAG   V   A+    A         F  +   +A +P +     
Sbjct: 79  AAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAA 138

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             I+ V S+    P P     +A++A L +L  +L  EL   G+
Sbjct: 139 ASIVCVNSLLALQPEPHMVATSAARAGLLNLVKSLATELAPKGV 182

Length = 265

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 78.1 bits (193), Expect = 4e-18
 Identities = 51/172 (29%), Positives = 78/172 (45%), Gaps = 30/172 (17%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
            IG A+ARA  A+  RV           A  A L +  RF     D+  + +++  ++ V
Sbjct: 17  LIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFI--ATDITDDAAIERAVATV 74

Query: 61  LEKFGKIDVLVNNA------GVQCVGPLAEVPLSAMEQ---TFNTNVFGPMRLVQAVVPH 111
           + +FG++D+LVN A      G+           S+        + N+     L QA  PH
Sbjct: 75  VARFGRVDILVNLACTYLDDGLA----------SSRADWLAALDVNLVSAAMLAQAAHPH 124

Query: 112 MAYRKKGKIINVGSV--TVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +A R  G I+N  S+    A  G W   Y ASKAA+  LT ++ ++L   GI
Sbjct: 125 LA-RGGGAIVNFTSISAKFAQTGRW--LYPASKAAIRQLTRSMAMDLAPDGI 173

Length = 261

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 77.9 bits (192), Expect = 4e-18
 Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 4/162 (2%)

Query: 5   GIGHALARAFAASDCRVVATGRSKA--TMADLEQDPRFFVQ-ELDVLSEQSVQNVLSNVL 61
           G+G  +A   A +   +V  GRS+   T   +E   R F+    D+   ++++ ++ + +
Sbjct: 16  GLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAV 75

Query: 62  EKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKI 120
           E+FG ID+LVNNAG+       E      +   N N+     L QA   H   + + GKI
Sbjct: 76  EEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKI 135

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           IN+ S+     G    +YTASK A+  LT  L  E    GI+
Sbjct: 136 INIASMLSFQGGIRVPSYTASKHAVAGLTKLLANEWAAKGIN 177

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 77.9 bits (192), Expect = 5e-18
 Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 13/163 (7%)

Query: 5   GIGHALARAFAASDCRVVATGRSK----ATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           GIG  +A+ F  +  RV+ + R          +L           D+ SE+ ++ +++ V
Sbjct: 17  GIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYGECIAIPADLSSEEGIEALVARV 76

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG-- 118
            E+  ++DVLVNNAG     PL   P S  ++  + NV     L QA++P +  R     
Sbjct: 77  AERSDRLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKSVFFLTQALLPLL--RAAATA 134

Query: 119 ----KIINVGSVT-VAAPGPWAGTYTASKAALHSLTDTLRLEL 156
               ++IN+GS+  +   G    +Y ASKAA+H LT  L  EL
Sbjct: 135 ENPARVINIGSIAGIVVSGLENYSYGASKAAVHQLTRKLAKEL 177

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 77.5 bits (191), Expect = 5e-18
 Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 10/166 (6%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQE-----LDVLSEQSVQNVLS 58
            GIG  +A   A     V     ++ T  +  ++      +     LDV  +  V + + 
Sbjct: 10  QGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAID 69

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-- 116
              EKFG  DV+VNNAGV  + P+ E+    +++ +N NV G +  +QA      ++K  
Sbjct: 70  QAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAA--ARQFKKQG 127

Query: 117 -KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             GKIIN  S+      P    Y+++K A+  LT T   EL   GI
Sbjct: 128 HGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGI 173

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 77.4 bits (191), Expect = 6e-18
 Identities = 54/167 (32%), Positives = 75/167 (44%), Gaps = 10/167 (5%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADL---EQDPRFFVQELDVLSEQSVQNVLSNVL 61
           G+G A+ARAFA    RVV         A+    E   R    + DV   + VQ + +   
Sbjct: 16  GLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATAT 75

Query: 62  EKFGK-IDVLVNNAGVQCV------GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY 114
           E FGK I  +VNNA               ++     +Q    +V G +  +QA +P M  
Sbjct: 76  EHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMRE 135

Query: 115 RKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +  G+IIN+G+     P      YT +KAAL  LT  L  ELG +GI
Sbjct: 136 QGFGRIINIGTNLFQNPVVPYHDYTTAKAALLGLTRNLAAELGPYGI 182

Length = 253

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 77.4 bits (191), Expect = 6e-18
 Identities = 52/169 (30%), Positives = 79/169 (46%), Gaps = 19/169 (11%)

Query: 5   GIGHALARAFAASDCRVVATGRS-----KATMADLEQDPRFFVQELDVLSEQSVQNVLSN 59
           GIG A+A+A+A +   +V    +     K   A  E          DV  E  VQ ++S 
Sbjct: 21  GIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQ 80

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
           + ++ G ID+LVNNAG+    P+ E+      Q  + ++  P  + +AV+P M  +  GK
Sbjct: 81  IEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGK 140

Query: 120 IINVGSV-------TVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           IIN+ S+       TV+A       Y A+K  L  LT  +  E G   I
Sbjct: 141 IINICSMMSELGRETVSA-------YAAAKGGLKMLTKNIASEYGEANI 182

Length = 265

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 76.9 bits (190), Expect = 7e-18
 Identities = 54/156 (34%), Positives = 82/156 (52%), Gaps = 13/156 (8%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLE 62
            GIG A+AR  A +   ++  GR    + +L  + P      +D+   +++    +  +E
Sbjct: 13  RGIGAAIARELAPTH-TLLLGGRPAERLDELAAELPGATPFPVDLTDPEAI----AAAVE 67

Query: 63  KFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKI- 120
           + G++DVLV+NAGV  +GP+AE  +     T   NV  P  L + ++P  A R   G + 
Sbjct: 68  QLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLP--ALRAAHGHVV 125

Query: 121 -INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
            IN G+   A PG W G+Y ASK AL +L D LR E
Sbjct: 126 FINSGAGLRANPG-W-GSYAASKFALRALADALREE 159

Length = 227

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 76.8 bits (189), Expect = 1e-17
 Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 7/162 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQ----DPRFFVQELDVLSEQSVQNVLSNV 60
           GIG  +A   A    RV+   RS+     L +         V   D+ +    Q V+   
Sbjct: 15  GIGRGVAERLAGEGARVLLVDRSELVHEVLAEILAAGDAAHVHTADLETYAGAQGVVRAA 74

Query: 61  LEKFGKIDVLVNNAGVQCVG-PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
           +E+FG++DVL+NN G      P        +E     ++F  +   +AV+PHM  R++G 
Sbjct: 75  VERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTLWCCRAVLPHMLERQQGV 134

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           I+NV S  +A  G +   Y+A+K  +++LT +L  E    GI
Sbjct: 135 IVNVSS--IATRGIYRIPYSAAKGGVNALTASLAFEHARDGI 174

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 76.1 bits (188), Expect = 2e-17
 Identities = 52/165 (31%), Positives = 77/165 (46%), Gaps = 12/165 (7%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD---PRFFVQELDVLSEQSVQNVLSNVL 61
           GIG A A  FAA   RV A   ++A +A L  +      +   LDV    +    L    
Sbjct: 12  GIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAAL---- 67

Query: 62  EKF-----GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
             F     G++DVL NNAG+   GP  ++PL A ++  + NV G +    A +P++    
Sbjct: 68  ADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP 127

Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             ++IN  S +     P    Y+A+K A+  LT+ L LE    GI
Sbjct: 128 GARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGI 172

Length = 260

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 75.9 bits (187), Expect = 2e-17
 Identities = 48/163 (29%), Positives = 72/163 (44%), Gaps = 6/163 (3%)

Query: 5   GIGHALARAFAASDCRVV---ATGRSKA--TMADLEQDPR-FFVQELDVLSEQSVQNVLS 58
           GIG A+A   A     +    A  R  A  T  ++E   R     + +V   + ++ + +
Sbjct: 15  GIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFA 74

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
            + E+FG++DV VNNA    + P  E+  S  + T N N    +   Q     M     G
Sbjct: 75  QIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGG 134

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           KII++ S+          T   SKAAL +LT  L +EL   GI
Sbjct: 135 KIISLSSLGSIRYLENYTTVGVSKAALEALTRYLAVELAPKGI 177

Length = 250

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 75.8 bits (187), Expect = 3e-17
 Identities = 50/172 (29%), Positives = 68/172 (39%), Gaps = 16/172 (9%)

Query: 5   GIGHALARAFAASDCRVVATGRS-----KATMADLEQDPR--FFVQELDVLSEQSVQNVL 57
           GIG  +ARA AA+   +    R       AT  +L        F    DV    + + +L
Sbjct: 13  GIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFP-ADVADLSAHEAML 71

Query: 58  SNVLEKFGKIDVLVNNAGVQCV--GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
                 +G+ID LVNNAGV     G L ++   + ++    N+ GP  L QAV   M  +
Sbjct: 72  DAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQ 131

Query: 116 KK------GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            +        I+ V SV      P  G Y  SKA L          L   GI
Sbjct: 132 PEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARLAEEGI 183

Length = 256

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 75.1 bits (185), Expect = 4e-17
 Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 8/158 (5%)

Query: 5   GIGHALARAFAASDCRVVATGRSKA-----TMADL-EQDPRFFVQELDVLSEQSVQNVLS 58
           GIG A+A   A     VV   + +A     T+  + E          DV + +  + +  
Sbjct: 17  GIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAK 76

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
             ++++G  D+LVNNAG+    P   V    +++  +T+    +   Q +   M  R+ G
Sbjct: 77  ATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEM--REGG 134

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
            I+N+ SV    P      Y A KAA+ +LT  L LEL
Sbjct: 135 AIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALEL 172

Length = 252

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 75.1 bits (185), Expect = 4e-17
 Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 17/168 (10%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATM---------ADLEQDPRFFVQELDVLSEQSVQN 55
           G+G  +ARA A +   V+  GR+ AT+         A    +   F    D+  E++V  
Sbjct: 22  GLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAF----DIADEEAVAA 77

Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
             + +  + G++D+LVNN G +   PLAE+  +A+     T++  P+ L +     M  +
Sbjct: 78  AFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQ 137

Query: 116 KKGKIINVGSVT--VAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             G+II + S+   VA  G     Y A+K  L  L   L  E G  GI
Sbjct: 138 GYGRIIAITSIAGQVARAGDAV--YPAAKQGLTGLMRALAAEFGPHGI 183

Length = 256

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 74.3 bits (183), Expect = 1e-16
 Identities = 42/125 (33%), Positives = 57/125 (45%), Gaps = 10/125 (8%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPR------FFVQELDVLSEQSVQNVLS 58
           GIG A A AFAA  C +    R    +  L  D R        V  LD+ S ++ + + +
Sbjct: 18  GIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAA 77

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
                 G ID+LVNNAG    G L +V  +A    +   VFG + L +   P M  R  G
Sbjct: 78  EA----GDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSG 133

Query: 119 KIINV 123
            I+NV
Sbjct: 134 VIVNV 138

Length = 259

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 73.6 bits (181), Expect = 1e-16
 Identities = 46/165 (27%), Positives = 69/165 (41%), Gaps = 5/165 (3%)

Query: 2   SQGGIGHALARAFAASDCRVVATGRS-----KATMADLEQDPRFFVQELDVLSEQSVQNV 56
           S  GIG  LA   A     ++    +      A     ++  +      +V  +Q V+  
Sbjct: 17  SAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAA 76

Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
           + ++ +  G IDVL+NNAG+Q   P  E P          N      + QAV  +M  R+
Sbjct: 77  IEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ 136

Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            GKIIN+ S+           Y ASK A+  LT  + +EL    I
Sbjct: 137 AGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNI 181

Length = 254

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 73.6 bits (181), Expect = 2e-16
 Identities = 45/164 (27%), Positives = 67/164 (40%), Gaps = 7/164 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADL-----EQDPRFFVQEL--DVLSEQSVQNVL 57
           GIG A+AR F      V+   R    +A       E+ P   V  L  DV  ++  + +L
Sbjct: 20  GIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAIL 79

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             V + +  + +LVNNAG        +         F TN+F    L +   P +     
Sbjct: 80  DWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHAS 139

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             I+N+GSV+          Y  +KAAL  +T  L +E    GI
Sbjct: 140 SAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWAEDGI 183

Length = 257

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 75.0 bits (185), Expect = 2e-16
 Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 6/164 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATM---ADLEQD--PRFFVQELDVLSEQSVQNVLS 58
            GIG   A AFA     VVA+   +A     A+L +          +DV    +++    
Sbjct: 325 SGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAE 384

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK- 117
            V  + G  D++VNNAG+   G   +      ++  + N++G +   +     M  R   
Sbjct: 385 WVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTG 444

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G I+NV S    AP      Y  SKAA+  L++ LR EL   GI
Sbjct: 445 GHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAELAAAGI 488

Length = 582

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 73.1 bits (180), Expect = 2e-16
 Identities = 46/173 (26%), Positives = 72/173 (41%), Gaps = 19/173 (10%)

Query: 5   GIGHALARAFAASDCRVVATGRSK---ATMADLEQDPRFFVQELDVLSEQSVQNVLSNVL 61
           G+G A      A   +VV          T+A L  + RF    +DV SE+ V+  L+   
Sbjct: 13  GLGLATVERLLAQGAKVVILDLPNSPGETVAKLGDNCRFV--PVDVTSEKDVKAALALAK 70

Query: 62  EKFGKIDVLVNNAGVQCVGPL------AEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
            KFG++D++VN AG+                L   ++  N N+ G   +++     M   
Sbjct: 71  AKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLIGTFNVIRLAAGAMGKN 130

Query: 116 ------KKGKIINVGSVTVAAPGPWAGT-YTASKAALHSLTDTLRLELGHFGI 161
                 ++G IIN  SV  A  G      Y+ASK  +  +T  +  +L   GI
Sbjct: 131 EPDQGGERGVIINTASVA-AFEGQIGQAAYSASKGGIVGMTLPIARDLAPQGI 182

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 73.3 bits (180), Expect = 3e-16
 Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 7/161 (4%)

Query: 5   GIGHALARAFAASDCRV-VATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
           GIG A+A AF     +V V    ++    +L +   F ++  DV +   V+     V ++
Sbjct: 18  GIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIK-CDVGNRDQVKKSKEVVEKE 76

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
           FG++DVLVNNAG+  + P  E       +    N+ G +      +P +   K G I+N+
Sbjct: 77  FGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNI 136

Query: 124 GS---VTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            S   +  AA G     Y  +KA +  LT  L  ELG +GI
Sbjct: 137 ASNAGIGTAAEG--TTFYAITKAGIIILTRRLAFELGKYGI 175

Length = 255

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 73.5 bits (181), Expect = 3e-16
 Identities = 52/170 (30%), Positives = 72/170 (42%), Gaps = 31/170 (18%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDP-------------RFFVQELDVLSE 50
            G G A AR  AA   ++V        +AD++QD                     DV   
Sbjct: 16  SGFGLAFARIGAALGMKLV--------LADVQQDALDRAVAELRAQGAEVLGVRTDVSDA 67

Query: 51  QSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVP 110
             V+ +    LE+FG + +L NNAGV   G + E  L+  E     N++G +  V+A  P
Sbjct: 68  AQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTP 127

Query: 111 HM--------AYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTL 152
            M        AY   G I+N  S+      P  G Y  SK A+ SLT+TL
Sbjct: 128 LMLAAAEKDPAYE--GHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTETL 175

Length = 287

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 73.2 bits (180), Expect = 3e-16
 Identities = 48/158 (30%), Positives = 66/158 (41%), Gaps = 7/158 (4%)

Query: 5   GIGHALARAFAASDCRVV-------ATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVL 57
           GIG A+ARAFA     V           R+ A +A      R      DV    SV   +
Sbjct: 18  GIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAV 77

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
           +   E FG +DVLVNNAG+        +      + F  ++ G     +AV+P M  R +
Sbjct: 78  AAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGR 137

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
           G I+N+ S       P    Y  +K  L  LT  L +E
Sbjct: 138 GSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIE 175

Length = 260

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 73.3 bits (180), Expect = 3e-16
 Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 22/170 (12%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQE------------LDVLSEQS 52
           GIG A A A A     V+A         D+ +     V +            +D+  EQ 
Sbjct: 17  GIGQASAIALAQEGAYVLA--------VDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQ 68

Query: 53  VQNVLSNVLEKFGKIDVLVNNAGV-QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH 111
           V++  S + E+FG++DVL NNAGV    G + E P+   ++    ++ G   + + ++P 
Sbjct: 69  VKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPL 128

Query: 112 MAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           M   + G IIN  S +  A   +   Y A+K A+ + T ++ +E G  GI
Sbjct: 129 M-MEQGGSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGI 177

Length = 272

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 72.6 bits (178), Expect = 3e-16
 Identities = 45/159 (28%), Positives = 66/159 (41%), Gaps = 8/159 (5%)

Query: 7   GHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQE---LDVLSEQSVQNVLSNVLEK 63
           G A A A       VV    S A  A+ +     F  E      LSEQ  + ++  VL+ 
Sbjct: 14  GPASAEALTEDGYTVVCHDASFADAAERQA----FESENPGTKALSEQKPEELVDAVLQA 69

Query: 64  FGKIDVLVNN-AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIIN 122
            G IDVLV+N    + + P+     + + Q F      P  L+QA +  M     G II 
Sbjct: 70  GGAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSIFPFALLQAAIAQMKKAGGGSIIF 129

Query: 123 VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           + S     P  +   Y  ++AA  +L ++L  EL    I
Sbjct: 130 ITSAVPKKPLAYNSLYGPARAAAVALAESLAKELSRDNI 168

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 72.9 bits (179), Expect = 4e-16
 Identities = 54/164 (32%), Positives = 76/164 (46%), Gaps = 8/164 (4%)

Query: 5   GIGHALARAF---AASDCRVVATGRSKATMAD-LEQDPRFFVQELDVLSEQSVQNVLSNV 60
           GIG ++ R F    A  C V         + D L  +P       DV  E  V   +   
Sbjct: 29  GIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFT 88

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAE---VPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
           ++KFG +D++VNNAG+    P  +   V LS  E+ F+ NV G    ++     M   KK
Sbjct: 89  VDKFGTLDIMVNNAGL-TGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKK 147

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G I+++ SV  A  G     YT SK A+  LT ++  ELG  GI
Sbjct: 148 GSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSVAAELGKHGI 191

Length = 280

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 72.4 bits (178), Expect = 4e-16
 Identities = 43/165 (26%), Positives = 64/165 (38%), Gaps = 10/165 (6%)

Query: 5   GIGHALARAFAASDCRVVATGRSKA--------TMADLEQDPRFFVQELDVLSEQSVQNV 56
           G+G A+AR FAA    V    R +A         + D     +      D   E  V  +
Sbjct: 10  GLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVP--TDARDEDEVIAL 67

Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
              + E+ G ++VLV NAG     P+ E      E+ +    FG     +     M  R 
Sbjct: 68  FDLIEEEIGPLEVLVYNAGANVWFPILETTPRVFEKVWEMAAFGGFLAAREAAKRMLARG 127

Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +G II  G+            +  +K AL +L  ++  ELG  GI
Sbjct: 128 RGTIIFTGATASLRGRAGFAAFAGAKFALRALAQSMARELGPKGI 172

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 72.4 bits (178), Expect = 4e-16
 Identities = 53/170 (31%), Positives = 77/170 (45%), Gaps = 14/170 (8%)

Query: 4   GGIGHALARAFAASDCRV-VATGRSKATMADLE--------QDPRFFVQELDVLSEQSVQ 54
           GG+G A+A   AA    V V         A+ +           +      DV    + +
Sbjct: 16  GGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATR 75

Query: 55  NVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM-A 113
             L   +E+FG++D+LVNNAG+      AE+ +   +   + N+ G   + QA +P M  
Sbjct: 76  AALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIR 135

Query: 114 YRKKGKIINVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
            R+ G+I+N+ S  VA      G   Y ASKA L  LT TL  EL   GI
Sbjct: 136 ARRGGRIVNIAS--VAGVRGNRGQVNYAASKAGLIGLTKTLANELAPRGI 183

Length = 249

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 70.9 bits (174), Expect = 1e-15
 Identities = 43/163 (26%), Positives = 65/163 (39%), Gaps = 6/163 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPR---FFVQEL--DVLSEQSVQNVLSN 59
           GIG+A+    A     V    R++  + +   + R   F V+    DV S    Q ++  
Sbjct: 17  GIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGSVCDVSSRSERQELMDT 76

Query: 60  VLEKF-GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
           V   F GK+++LVNNAG        +          +TN      L +   P +     G
Sbjct: 77  VASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFEAAYHLSRLAHPLLKASGNG 136

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            I+ + SV      P    Y A+K AL+ LT +L  E     I
Sbjct: 137 NIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACEWAKDNI 179

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 70.9 bits (174), Expect = 2e-15
 Identities = 48/167 (28%), Positives = 72/167 (43%), Gaps = 8/167 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD--------PRFFVQELDVLSEQSVQN 55
           GG+G A+AR  A    +V  T  + A   D               F    DV  E   Q 
Sbjct: 9   GGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQA 68

Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
           +L+   +  G + VLVNNAGV   G + ++ L    +    NV       +  +P++   
Sbjct: 69  LLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS 128

Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           +   I+N+ SV      P    Y ASKAA+ SLT ++ L+    G+D
Sbjct: 129 QPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLD 175

Length = 251

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 71.3 bits (175), Expect = 2e-15
 Identities = 45/177 (25%), Positives = 76/177 (42%), Gaps = 19/177 (10%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKA----TMADLEQDP-RFFVQELDVLSEQSVQNVLS 58
           G +G A+ARA A +  +V A GR++        ++     R      DVL   S++    
Sbjct: 15  GVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAADVLDRASLERARE 74

Query: 59  NVLEKFGKIDVLVNNAG--------------VQCVGPLAEVPLSAMEQTFNTNVFGPMRL 104
            ++ +FG +D+L+N AG               +      ++     E  F+ N+ G    
Sbjct: 75  EIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGWEFVFDLNLNGSFLP 134

Query: 105 VQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            Q     M  +K G IIN+ S+   +P      Y+A+KAA+ + T  L +E    G+
Sbjct: 135 SQVFGKDMLEQKGGSIINISSMNAFSPLTKVPAYSAAKAAVSNFTQWLAVEFATTGV 191

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 70.7 bits (173), Expect = 2e-15
 Identities = 46/168 (27%), Positives = 71/168 (42%), Gaps = 22/168 (13%)

Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQE-------------LDVL 48
           +  GIG  +A   A +   V         +ADL QD    V +             +DV 
Sbjct: 15  AASGIGKEIALELARAGAAVA--------IADLNQDGANAVADEINKAGGKAIGVAMDVT 66

Query: 49  SEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAV 108
           +E +V   +  V E+FG +D+LV+NAG+Q V P+     +  ++    +V G     +A 
Sbjct: 67  NEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAA 126

Query: 109 VPHMAY-RKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
           + HM    + G +I +GSV      P    Y  +K  L  L   L  E
Sbjct: 127 LKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKE 174

Length = 262

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 70.8 bits (174), Expect = 3e-15
 Identities = 48/165 (29%), Positives = 83/165 (50%), Gaps = 11/165 (6%)

Query: 5   GIGHALARAFA--ASDCRVV---ATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLS 58
           GIG A+A  FA   +D  +V       +  T   +E++  +  +   DV  E   ++ + 
Sbjct: 57  GIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVE 116

Query: 59  NVLEKFGKIDVLVNNAGVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             + + G++D+LVNNA  Q     L ++    +++TF TN++    + +A +PH+   K+
Sbjct: 117 ETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHL---KQ 173

Query: 118 GK-IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G  IIN GS+T          Y+A+K A+H+ T +L   L   GI
Sbjct: 174 GSAIINTGSITGYEGNETLIDYSATKGAIHAFTRSLAQSLVQKGI 218

Length = 290

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 70.2 bits (172), Expect = 3e-15
 Identities = 45/161 (27%), Positives = 67/161 (41%), Gaps = 12/161 (7%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQ--------DPRFFVQELDVLSEQSVQNV 56
           G+G A+A AFA +   V+   R   T + L++          R  V   D+   ++   +
Sbjct: 21  GLGAAIALAFAEAGADVLIAAR---TESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGL 77

Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM-AYR 115
               +E FG++D++VNN G     PL       +   F  NV     L  A VP M  + 
Sbjct: 78  AGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHS 137

Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
             G +IN+ S      G     Y  +KAAL   T    L+L
Sbjct: 138 GGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDL 178

Length = 263

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 70.0 bits (172), Expect = 4e-15
 Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 11/166 (6%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQEL-----DVLSEQSVQNVLSN 59
           GIG A A+ FA    +VV   R +A +  L  + R    E      DV  E   + +++ 
Sbjct: 17  GIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVAL 76

Query: 60  VLEKFGKIDVLVNNAG-VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
            +E+FG +D+  NNAG +  +GP+AE+ L    +T  TN+       +  +P M  R  G
Sbjct: 77  AVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGG 136

Query: 119 KIINVGS---VTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            +I   +    T   PG     Y ASKA L  LT  L  E G  GI
Sbjct: 137 SLIFTSTFVGHTAGFPG--MAAYAASKAGLIGLTQVLAAEYGAQGI 180

Length = 254

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 69.4 bits (170), Expect = 6e-15
 Identities = 47/173 (27%), Positives = 65/173 (37%), Gaps = 18/173 (10%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMAD--------LEQDPRFFVQELDVLSEQSVQNV 56
           GIG A+A   AA    +          A           +   +F  + D+      + +
Sbjct: 12  GIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYF--QADIGELSDHEAL 69

Query: 57  LSNVLEKFGKIDVLVNNAGVQCV--GPLAEVPLSAMEQTFNTNVFGPMRLVQAVV----- 109
           L    E FG++D LVNNAG+     G L ++   + ++    N+ GP  L QAV      
Sbjct: 70  LDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFLTQAVARRMVE 129

Query: 110 -PHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            P         II V S+      P  G Y  SKA L   T  L   L   GI
Sbjct: 130 QPDRFDGPHRSIIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAYRLADEGI 182

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 68.4 bits (167), Expect = 1e-14
 Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 6/159 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPR-FFVQELDVLSEQSVQNVLSNVLEK 63
           GIG  LA  +A    +V+A GR+++ + +L       F    DV      +  LS +   
Sbjct: 12  GIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQL--P 69

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
           F   ++ + NAG        +V  + M + FN NV G    ++ + PH       +++ V
Sbjct: 70  F-IPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPH--LSCGHRVVIV 126

Query: 124 GSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           GS+      P A  Y ASKAA+     TL+L+L   GI+
Sbjct: 127 GSIASELALPRAEAYGASKAAVAYFARTLQLDLRPKGIE 165

Length = 240

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 68.0 bits (166), Expect = 2e-14
 Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 6/161 (3%)

Query: 2   SQGGIGHALARAFAASDCRVVATGRSKA----TMADLEQDPRFFVQEL-DVLSEQSVQNV 56
           S  GIG A+AR  A     VV + R +      +A L+ +       +  V   +  + +
Sbjct: 18  STDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGTVCHVGKAEDRERL 77

Query: 57  LSNVLEKFGKIDVLVNNAGVQCV-GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
           ++  +   G +D+LV+NA V    G + +      ++  + NV     + +AVVP M  R
Sbjct: 78  VATAVNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNVKATALMTKAVVPEMEKR 137

Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
             G ++ V SV    P P  G Y  SK AL  LT  L  EL
Sbjct: 138 GGGSVVIVSSVAAFHPFPGLGPYNVSKTALLGLTKNLAPEL 178

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 67.3 bits (165), Expect = 4e-14
 Identities = 50/166 (30%), Positives = 73/166 (43%), Gaps = 24/166 (14%)

Query: 6   IGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSV------------ 53
           IG A+AR   A+  RV       A  AD          EL+ L   S             
Sbjct: 18  IGAAIARTLHAAGYRVAIHYHRSAAEADA------LAAELNALRPGSAAALQADLLDPDA 71

Query: 54  -QNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM 112
              +++  +  FG++D LVNNA      PL  +  +  +  F +N+  P  L QA  P +
Sbjct: 72  LPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQL 131

Query: 113 AYRKKGKIINVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLEL 156
             +++G I+N+    + A  P  G   Y A+KAAL  LT +L LEL
Sbjct: 132 R-KQRGAIVNI--TDIHAERPLKGYPVYCAAKAALEMLTRSLALEL 174

Length = 249

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 66.7 bits (163), Expect = 4e-14
 Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 4/161 (2%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADL--EQDP-RFFVQELDVLSEQSVQNVLSNVL 61
           GIG   A  FA +   V      +  +A L  E          LDV    +    L++  
Sbjct: 11  GIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAENVVAGALDVTDRAAWAAALADFA 70

Query: 62  EKFG-KIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
              G ++D L NNAGV   GP  +VPL+A ++  + NV G +    A +P++      ++
Sbjct: 71  AATGGRLDALFNNAGVGRGGPFEDVPLAAHDRMVDINVKGVLNGAYAALPYLKATPGARV 130

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           IN  S +     P    Y+A+K A+  LT+ L +E    GI
Sbjct: 131 INTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHGI 171

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 66.8 bits (163), Expect = 6e-14
 Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 8/164 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD------PRFFVQELDVLSEQSVQNVLS 58
           GIG  + RAF  +  +VV   R +A    LE +              DV  E+ ++ ++S
Sbjct: 20  GIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVPCDVTKEEDIKTLIS 79

Query: 59  NVLEKFGKIDVLVNNAGVQCV-GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             +E+FG+ID LVNNAG         E          N N+       +  +PH+  + +
Sbjct: 80  VTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLISYFLASKYALPHLR-KSQ 138

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G IIN+ S+  +     A  Y A+K A+ ++T  L ++   +G+
Sbjct: 139 GNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVDESRYGV 182

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 66.9 bits (164), Expect = 7e-14
 Identities = 41/169 (24%), Positives = 65/169 (38%), Gaps = 33/169 (19%)

Query: 4   GGIGHALARAFAASDCRVVATGR----SKATMADLEQ---DPRFFVQELDVLSEQSVQNV 56
            GIG   AR  A     V+   R     +   A++++   + +  V +LD+ S  SV+  
Sbjct: 11  SGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLDLSSLASVRQF 70

Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLS----AMEQTFNTNVFGPMRLVQAVVPHM 112
               L +F ++D+L+NNAG+         P        E  F  N  G   L   ++P +
Sbjct: 71  AEEFLARFPRLDILINNAGI------MAPPRRLTKDGFELQFAVNYLGHFLLTNLLLPVL 124

Query: 113 AYRKKGKIINVGSVT-VAAP--------------GPWAGTYTASKAALH 146
                 +I+NV S+   A P               P+   Y  SK A  
Sbjct: 125 KASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYK-AYGQSKLANI 172

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 66.5 bits (163), Expect = 7e-14
 Identities = 53/161 (32%), Positives = 71/161 (44%), Gaps = 8/161 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVL 61
            GIG AL   F A   RV    RS   +A L Q       V E DV S    Q  +   +
Sbjct: 16  SGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTV 75

Query: 62  EKFGKIDVLVNNAGV-QCVGPLAEVPL----SAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
           + FGK+D  V NAG+      L ++P     +A ++ FN NV G +   +A +P +    
Sbjct: 76  DAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPAL-KAS 134

Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG 157
            G +I   S +   PG     YTASK A+  L   L  EL 
Sbjct: 135 GGSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLAYELA 175

Length = 263

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 66.5 bits (163), Expect = 8e-14
 Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 12/165 (7%)

Query: 4   GGIGHALARAFAASDCRVVATGRSK---ATMADLEQ-DPRFFVQELDVLSEQSVQNVLSN 59
            GIG A++   A      V  GRS        +L    PR    ++D+  +   ++ +  
Sbjct: 17  SGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQ 76

Query: 60  VLEKFGKIDVLVNNAGVQ-CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
            + KFG+ID LVNNAGV   VG   E    A   +   N+     +    +PH+    +G
Sbjct: 77  TVAKFGRIDGLVNNAGVNDGVG--LEAGREAFVASLERNLIHYYVMAHYCLPHLK-ASRG 133

Query: 119 KIINVGSVTVAAPGPWAGT--YTASKAALHSLTDTLRLELGHFGI 161
            I+N+ S T A  G   GT  Y A+K A  +LT    + L   G+
Sbjct: 134 AIVNISSKT-ALTGQ-GGTSGYAAAKGAQLALTREWAVALAKDGV 176

Length = 258

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 66.2 bits (162), Expect = 1e-13
 Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 7/165 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPR------FFVQELDVLSEQSVQNVLS 58
           GIG A A   AA    +  T R    +A    D R         + LD+    +V    +
Sbjct: 11  GIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAA 70

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM-AYRKK 117
           ++    G +DV++N AG+   G +  +      +  + N+ GP+ +++  VP M A  + 
Sbjct: 71  DIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRG 130

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           G ++NV S       PW   Y+ASK  L  L++ LR +L   GI 
Sbjct: 131 GHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLARHGIG 175

Length = 272

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 65.9 bits (161), Expect = 1e-13
 Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 12/166 (7%)

Query: 5   GIGHALARAFAASDCRVVATGR----SKATMADLEQ--DPRFFVQELDVLSEQSVQNVLS 58
           GIG A A AFA    +VV   R     + T+A + +      FV   DV  +  V+ ++ 
Sbjct: 18  GIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVA-CDVTRDAEVKALVE 76

Query: 59  NVLEKFGKIDVLVNNAGVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             +  +G++D   NNAG++   G LAE   +  +     NV G    ++  +P M  +  
Sbjct: 77  QTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGG 136

Query: 118 GKIINVGSVT--VAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G I+N  SV    AAP      Y ASK A+  LT +  +E    GI
Sbjct: 137 GAIVNTASVAGLGAAPK--MSIYAASKHAVIGLTKSAAIEYAKKGI 180

Length = 253

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 66.8 bits (163), Expect = 1e-13
 Identities = 47/167 (28%), Positives = 69/167 (41%), Gaps = 10/167 (5%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD-------PRFFVQELDVLSEQSVQNV 56
           GGIG   AR  AA    VV    +      +  +        R    ++DV  EQ+V+  
Sbjct: 424 GGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAA 483

Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLV--QAVVPHMAY 114
            ++V   +G +D++VNNAG+    P  E  L   +   +    G   LV  +A       
Sbjct: 484 FADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYF-LVAREAFRQMREQ 542

Query: 115 RKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
              G I+ + S      G  A  Y+A+KAA   L   L  E G +GI
Sbjct: 543 GLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEGGTYGI 589

Length = 676

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 65.4 bits (160), Expect = 2e-13
 Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 31/179 (17%)

Query: 4   GGIGHALARAFAASDCRVV-------ATGRSKAT-MADLEQDPRFFVQELDVLSEQSV-- 53
           GG+G A A AFA    +VV         G  K++  AD        V E+     ++V  
Sbjct: 15  GGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADK------VVDEIKAAGGKAVAN 68

Query: 54  -------QNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQ 106
                  + ++   ++ FG++D+LVNNAG+      A++     +     ++ G  ++ +
Sbjct: 69  YDSVEDGEKIVKTAIDAFGRVDILVNNAGILRDRSFAKMSEEDWDLVMRVHLKGSFKVTR 128

Query: 107 AVVPHMAYRKKGKIINVGSVTVAAPGPWA----GTYTASKAALHSLTDTLRLELGHFGI 161
           A  P+M  +K G+IIN    T +A G +       Y+A+K  L  L++TL +E   + I
Sbjct: 129 AAWPYMRKQKFGRIIN----TSSAAGLYGNFGQANYSAAKLGLLGLSNTLAIEGAKYNI 183

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 64.9 bits (159), Expect = 2e-13
 Identities = 43/167 (25%), Positives = 67/167 (40%), Gaps = 12/167 (7%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVLS 58
             I  A+A+A A     VV T    A       +     P   +  LDV S++ +  +  
Sbjct: 6   NSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKELPADVI-PLDVTSDEDIDELFE 64

Query: 59  NVLEKFGKIDVLVNNAG----VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY 114
            V E  GKID LV++      ++   P  +       +  + + +  + L +A  P M  
Sbjct: 65  KVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISAYSFISLAKAAKPLMN- 123

Query: 115 RKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            + G I+ +  +      P  G    +KAAL SL   L  ELG  GI
Sbjct: 124 -EGGSIVALSYIAAERVFPGYGGMGVAKAALESLARYLAYELGRKGI 169

Length = 239

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 64.6 bits (157), Expect = 3e-13
 Identities = 45/163 (27%), Positives = 66/163 (40%), Gaps = 5/163 (3%)

Query: 4   GGIGHALARAFAASDCRVVA---TGRSKATMADLEQDPRFFVQEL--DVLSEQSVQNVLS 58
           GGIG A  R FA    +V        +   +A   +      Q    D+    SV   ++
Sbjct: 13  GGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVA 72

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
              +  G +DVLVNNAG    GP  +      E+    N+ G + +  AV+P M  R  G
Sbjct: 73  AAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAG 132

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +I+N+ S            Y A K  L + + T+  E    GI
Sbjct: 133 RIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGI 175

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 64.3 bits (157), Expect = 5e-13
 Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 8/165 (4%)

Query: 5   GIGHALARAFAASDCRVVAT-------GRSKATMADLEQDPRFFVQELDVLSEQSVQNVL 57
           GIG A AR       RVV +       G +   +A      R      DV SE  V  ++
Sbjct: 29  GIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALI 88

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK- 116
              +E+ G++DVLVNNAG+    P+ ++      +  +  + G  R  +A + +M  R  
Sbjct: 89  DAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGH 148

Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            G I+N  SV           Y A+KA + +LT    LE   +G+
Sbjct: 149 GGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALEAAEYGV 193

Length = 262

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 62.9 bits (153), Expect = 9e-13
 Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 6/153 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
           GGIG ALARA A    R++ +GR    +A L  +     +  DV +E  V      + ++
Sbjct: 8   GGIGRALARALAGRGWRLLLSGRDAGALAGLAAEVGALARPADVAAELEVW----ALAQE 63

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
            G +D+LV  AG     PLA    +A  +  + N+ G   +++  +  +A   +   +  
Sbjct: 64  LGPLDLLVYAAGAILGKPLARTKPAAWRRILDANLTGAALVLKHALALLAAGARLVFLGA 123

Query: 124 GSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
               V  PG     Y A+KAAL +  +  R E+
Sbjct: 124 YPELVMLPG--LSAYAAAKAALEAYVEVARKEV 154

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 63.2 bits (154), Expect = 1e-12
 Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 7/164 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRSK----ATMADLEQDP-RFFVQELDVLSEQSVQNVLSN 59
           G+G A+A+ FA     VV TGR+K        ++EQ P +    ++DV + + VQ ++  
Sbjct: 12  GMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQ 71

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH-MAYRKKG 118
           + EKFG+ID L+NNA    + P  ++ ++      +  + G     QAV  + +    KG
Sbjct: 72  IDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKG 131

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH-FGI 161
            IIN+ +      GP      A+KA + ++T TL +E G  +GI
Sbjct: 132 NIINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAVEWGRKYGI 175

Length = 252

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 63.0 bits (154), Expect = 1e-12
 Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 26/181 (14%)

Query: 4   GGIGHALARAFAASDCRVVATGRSK----ATMADL-EQDPRFFVQELDVLSEQSVQNVLS 58
           G +G A+A+  A +  +V    R++    A +A++          + DVL ++S++    
Sbjct: 20  GVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQ 79

Query: 59  NVLEKFGKIDVLVNNAG---------VQCVGPLAEV------PLSAMEQTFNTNVFGPMR 103
            +LE FG  D+L+N AG          +    +              E  F+ N+ G + 
Sbjct: 80  QILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLL 139

Query: 104 LVQAVVPHMAYRKKGKIINVGSVTVAAPGPW---AGTYTASKAALHSLTDTLRLELGHFG 160
             Q     M  RK G IIN+ S  + A  P       Y+A+KAA+ + T  L +     G
Sbjct: 140 PTQVFAKDMVGRKGGNIINISS--MNAFTPLTKVPA-YSAAKAAISNFTQWLAVHFAKVG 196

Query: 161 I 161
           I
Sbjct: 197 I 197

Length = 278

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 62.6 bits (152), Expect = 2e-12
 Identities = 36/161 (22%), Positives = 65/161 (40%), Gaps = 9/161 (5%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD--------PRFFVQELDVLSEQSVQNV 56
           GIG   A  +A     V+  GR++  +  +           P++F+ +L   + ++ Q +
Sbjct: 15  GIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFILDLLTCTSENCQQL 74

Query: 57  LSNVLEKFGKIDVLVNNAGVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
              +   + ++D +++NAG+   V PL+E      +     NV     L QA++P +   
Sbjct: 75  AQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNATFMLTQALLPLLLKS 134

Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
             G ++   S          G Y  SK A   L   L  E 
Sbjct: 135 DAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEY 175

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 62.7 bits (153), Expect = 2e-12
 Identities = 53/179 (29%), Positives = 75/179 (41%), Gaps = 41/179 (22%)

Query: 5   GIGHALARAFAASDCRVVATGRSK-----------------ATMADLEQDPRFFVQELDV 47
           GIG  +A   AA   RVV   RS+                 A  ADLE            
Sbjct: 19  GIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLET----------- 67

Query: 48  LSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG-----PLAEVPLSAMEQTFNTNVFGPM 102
                 Q  ++  +E FG+IDVL+NN G    G     P  E     +E     ++F  +
Sbjct: 68  --YAGAQAAMAAAVEAFGRIDVLINNVG----GTIWAKPFEEYEEEQIEAEIRRSLFPTL 121

Query: 103 RLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
              +AV+PHM  +  G I+NV S  +A  G     Y+A+K  +++LT +L  E    GI
Sbjct: 122 WCCRAVLPHMLAQGGGAIVNVSS--IATRGINRVPYSAAKGGVNALTASLAFEYAEHGI 178

Length = 260

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 63.0 bits (153), Expect = 2e-12
 Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 20/170 (11%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQEL------------DVLSEQS 52
           GIG A A AFA     +         + + EQD    VQ +            D+  E  
Sbjct: 66  GIGRATAIAFAREGADIALN-----YLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAF 120

Query: 53  VQNVLSNVLEKFGKIDVLVNNAGVQ-CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH 111
            + ++   +++ G +D+LVN AG Q  V  +A++     + TF TNV+    L +A +PH
Sbjct: 121 CRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPH 180

Query: 112 MAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +       IIN GS+    P P    Y ++KAA+ + T  L  ++   GI
Sbjct: 181 L--PPGASIINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQVAEKGI 228

Length = 300

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 62.3 bits (152), Expect = 2e-12
 Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 22/176 (12%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKA----TMADLEQ---DPRFFVQELDVLSEQSVQNV 56
            G+G A+A   A    ++     ++      +A+      + R +    +V  E+ V+  
Sbjct: 15  QGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYA--ANVTDEEDVEAT 72

Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEV---------PLSAMEQTFNTNVFGPMRLVQA 107
            + + E FG+++ L+NNAG+   G L +           L   +   + N+ G     + 
Sbjct: 73  FAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGRE 132

Query: 108 VVPHMA-YRKKGKIINVGSVTVAAPGPWAGT-YTASKAALHSLTDTLRLELGHFGI 161
               M     KG IIN+ S+  A  G    T Y+ASKA + ++T T   EL  +GI
Sbjct: 133 AAAKMIESGSKGVIINISSIARA--GNMGQTNYSASKAGVAAMTVTWAKELARYGI 186

Length = 253

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 62.5 bits (152), Expect = 2e-12
 Identities = 42/174 (24%), Positives = 72/174 (41%), Gaps = 16/174 (9%)

Query: 4   GGIGHALARAFAASDCRVVATGRS---KATMADLEQDPRFFVQ-------------ELDV 47
            GIG A+ +  A +   +  T  +   K     ++QD +  +Q             ELD+
Sbjct: 18  DGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDL 77

Query: 48  LSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQA 107
               + + +L+ V E+ G   +LVNNA        + +    +++ +  NV     L   
Sbjct: 78  TQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQ 137

Query: 108 VVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
                  +  G+IIN+ S     P      Y A+K A+ +LT +L  E+ H GI
Sbjct: 138 FARGFDKKSGGRIINMTSGQFQGPMVGELAYAATKGAIDALTSSLAAEVAHLGI 191

Length = 256

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 62.2 bits (151), Expect = 2e-12
 Identities = 55/170 (32%), Positives = 77/170 (45%), Gaps = 19/170 (11%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQEL-----DVLSEQSVQNVLSN 59
           GIG A+AR       RV    R +  +A   ++ R    E      DV S   ++ +++ 
Sbjct: 14  GIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRTCDVRSVPEIEALVAA 73

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH--MAYRKK 117
            + ++G IDVLVNNAG    G  AE+          TN+ G  R+ + V+    M  R  
Sbjct: 74  AVARYGPIDVLVNNAGRSGGGATAELADELWLDVVETNLTGVFRVTKEVLKAGGMLERGT 133

Query: 118 GKIINVGS------VTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G+IIN+ S      V  AAP      Y+ASK  +   T  L LEL   GI
Sbjct: 134 GRIINIASTGGKQGVVHAAP------YSASKHGVVGFTKALGLELARTGI 177

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 62.5 bits (152), Expect = 3e-12
 Identities = 47/160 (29%), Positives = 71/160 (44%), Gaps = 8/160 (5%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLE 62
           G+G A+   F A   RV    +S A + +LE          E DV S    +  ++  + 
Sbjct: 16  GLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVA 75

Query: 63  KFGKIDVLVNNAGV-QCVGPLAEVPL----SAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
            FGKID L+ NAG+      L ++P      A ++ F+ NV G +  V+A +P +    +
Sbjct: 76  AFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPAL-VASR 134

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG 157
           G +I   S     P      YTA+K A+  L   L  EL 
Sbjct: 135 GSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELA 174

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 61.8 bits (150), Expect = 4e-12
 Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 4/162 (2%)

Query: 5   GIGHALARAFAASDCRVVATG--RSKATMADLEQDPRFFVQ-ELDVLSEQSVQNVLSNVL 61
           G+G  +A   A + C +V         T+  +    R F+    D+     +  +L   +
Sbjct: 21  GLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAV 80

Query: 62  EKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH-MAYRKKGKI 120
            +FG ID+LVNNAG+       E      +   N N+     + QA   H +A    GKI
Sbjct: 81  AEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKI 140

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           IN+ S+     G    +YTASK+ +  +T  +  E     I+
Sbjct: 141 INIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNIN 182

Length = 253

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 61.6 bits (150), Expect = 4e-12
 Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 8/160 (5%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLE 62
           G+G AL   F A   +V    RS   +A+L  D        E DV S    +  ++  +E
Sbjct: 15  GLGRALVERFVAEGAKVAVLDRSAEKVAELRADFGDAVVGVEGDVRSLADNERAVARCVE 74

Query: 63  KFGKIDVLVNNAGV-----QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
           +FGK+D  + NAG+       V    E    A ++ F+ NV G +   +A +P + Y  +
Sbjct: 75  RFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHINVKGYILGAKAALPAL-YATE 133

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG 157
           G +I   S     PG     YTASK A+  L   L  EL 
Sbjct: 134 GSVIFTVSNAGFYPGGGGPLYTASKHAVVGLVKQLAYELA 173

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 61.6 bits (149), Expect = 5e-12
 Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 6/163 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADL------EQDPRFFVQELDVLSEQSVQNVLS 58
           GIG A+  A A    +VV    S    A+       ++    +  + DV   +    ++ 
Sbjct: 17  GIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVE 76

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
             +  FGK+D+LVNNAG+       ++     E+  + N+        AV+P++   ++G
Sbjct: 77  EAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEG 136

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +II++ S+   A G     Y+A+KA +   T +L LEL    +
Sbjct: 137 RIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNV 179

Length = 247

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 61.8 bits (150), Expect = 5e-12
 Identities = 50/178 (28%), Positives = 71/178 (39%), Gaps = 29/178 (16%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           GIG   A   A     +V   R+   + D+            + S+ S   + + V++  
Sbjct: 64  GIGKGFAFQLARKGLNLVLVARNPDKLKDVSDS---------IQSKYSKTQIKTVVVDFS 114

Query: 65  GKID----------------VLVNNAGVQ--CVGPLAEVPLSAMEQTFNTNVFGPMRLVQ 106
           G ID                VL+NN GV         EV    ++     NV G  ++ Q
Sbjct: 115 GDIDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQ 174

Query: 107 AVVPHMAYRKKGKIINVGS--VTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           AV+P M  RKKG IIN+GS    V    P    Y A+KA +   +  L +E    GID
Sbjct: 175 AVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGID 232

Length = 320

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 60.8 bits (148), Expect = 6e-12
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           G+G  L         +V AT R       L+  P   +++LD+    S+  +L  +  + 
Sbjct: 12  GLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQ- 70

Query: 65  GKIDVLVNNAGVQCVGP----LAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
            + D+L  NAG+   GP     A+   + + Q F TN   P+RL + ++  +    +G +
Sbjct: 71  -RFDLLFVNAGIS--GPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVR-PGQGVL 126

Query: 121 INV----GSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG 157
             +    GSV +   G     Y ASKAAL+S+T +   ELG
Sbjct: 127 AFMSSQLGSVELPD-GGEMPLYKASKAALNSMTRSFVAELG 166

Length = 225

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 61.1 bits (148), Expect = 6e-12
 Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 4/162 (2%)

Query: 5   GIGHALARAFAASDCRVVATGRSKA--TMADLEQ-DPRFFVQELDVLSEQSVQNVLSNVL 61
           G+G  +A   A +   +V  G ++A  T A +E    +F     D++ ++ + +++S  +
Sbjct: 19  GLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAV 78

Query: 62  EKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG-KI 120
           E  G ID+L+NNAG+     L E      +   N N      L QAV      +  G KI
Sbjct: 79  EVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKI 138

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           IN+ S+     G    +YTASK+A+  LT  L  EL  + I+
Sbjct: 139 INIASMLSFQGGIRVPSYTASKSAVMGLTRALATELSQYNIN 180

Length = 251

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 60.8 bits (148), Expect = 9e-12
 Identities = 42/173 (24%), Positives = 68/173 (39%), Gaps = 24/173 (13%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQE---------------LDVLS 49
            +G  L    A    RV         +AD+  +    V +                D  S
Sbjct: 13  TLGAFLCHGLAEEGYRVA--------VADINSEKAANVAQEINAEYGEGMAYGFGADATS 64

Query: 50  EQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVV 109
           EQSV  +   V E FG++D+LV NAG+     + +  L   +++   N+ G     +   
Sbjct: 65  EQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFS 124

Query: 110 PHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             M     +G+II + S +          Y+A+K     LT +L L+L  +GI
Sbjct: 125 RLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGI 177

Length = 259

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 60.6 bits (147), Expect = 1e-11
 Identities = 48/169 (28%), Positives = 72/169 (42%), Gaps = 13/169 (7%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMAD------LEQDPRFFVQELDVLSEQSVQNVLS 58
           GIG A A   A     V          A+        Q         DV  E  V  +  
Sbjct: 13  GIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFE 72

Query: 59  NVLEKFGKIDVLVNNAGV-QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-- 115
            V  + G++D LVNNAG+ +    L ++  + + + F TNV G     +  V  M+ R  
Sbjct: 73  AVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHG 132

Query: 116 -KKGKIINVGSVT--VAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            + G I+NV S+   + +PG +   Y ASK A+ ++T  L  E+   GI
Sbjct: 133 GRGGAIVNVSSMAARLGSPGEYI-DYAASKGAIDTMTIGLAKEVAAEGI 180

Length = 248

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 60.5 bits (147), Expect = 1e-11
 Identities = 48/165 (29%), Positives = 71/165 (43%), Gaps = 11/165 (6%)

Query: 4   GGIGHALARAFAASDCRVVAT----GRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSN 59
            GIG A AR  AA    VV         KA   ++      FV   DV  E +V  +   
Sbjct: 17  SGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGG---LFVP-TDVTDEDAVNALFDT 72

Query: 60  VLEKFGKIDVLVNNAGVQCV--GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             E +G +D+  NNAG+       +    L A ++  + N+       +A +PHM  + K
Sbjct: 73  AAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGK 132

Query: 118 GKIINVGS-VTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G IIN  S V V        +YTASK  + +++  L ++    GI
Sbjct: 133 GSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQGI 177

Length = 255

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 59.5 bits (144), Expect = 1e-11
 Identities = 32/96 (33%), Positives = 47/96 (48%)

Query: 66  KIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGS 125
           + DV+V+NA +   G L ++  S +E+    NV G  RL++A    M  ++ G+ I + S
Sbjct: 31  RRDVVVHNAAILDDGRLIDLTGSRIERAIRANVVGTRRLLEAARELMKAKRLGRFILISS 90

Query: 126 VTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           V      P  G Y ASKAAL  L      E    G+
Sbjct: 91  VAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGL 126

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 59.6 bits (145), Expect = 2e-11
 Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 8/150 (5%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
           G +G A+ +AF +    V +   +     + E D    V + D  +EQ+ + V+++V   
Sbjct: 11  GALGSAVVQAFKSRGWWVASIDLA----ENEEADASIIVLDSDSFTEQA-KQVVASVARL 65

Query: 64  FGKIDVLVNNAGVQCVGPLAE-VPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIIN 122
            GK+D L+  AG    G       +   +  +  N++           H+     G ++ 
Sbjct: 66  SGKVDALICVAGGWAGGSAKSKSFVKNWDLMWKQNLWTSFIASHLATKHL--LSGGLLVL 123

Query: 123 VGSVTVAAPGPWAGTYTASKAALHSLTDTL 152
            G+     P P    Y A+KAA+H LT +L
Sbjct: 124 TGAKAALEPTPGMIGYGAAKAAVHQLTQSL 153

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 59.7 bits (145), Expect = 2e-11
 Identities = 46/157 (29%), Positives = 63/157 (40%), Gaps = 12/157 (7%)

Query: 4   GGIGHALARAFAASDCRVVATGRSK----ATMADLEQDPRFFVQELDVLSEQSVQNVLSN 59
            GIG ALARAFAA   RV    RS+    A    L          LD+  E +V    + 
Sbjct: 7   SGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAE 66

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
                G  D +V  A     GP+  +PL+A +   ++  +G  R+ +A    +A    G 
Sbjct: 67  A----GPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARA--ARIAPG--GS 118

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
           +  V       P        A  AAL +L   L LEL
Sbjct: 119 LTFVSGFAAVRPSASGVLQGAINAALEALARGLALEL 155

Length = 230

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 58.9 bits (143), Expect = 3e-11
 Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 9/148 (6%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVL-SNVLEK 63
           G+G ALA         V+   RS+          R    ELD+    +    L  ++L  
Sbjct: 12  GLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAA 71

Query: 64  FG---KIDVLVNNAG-VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
           F       +L+NNAG V+ +GPLA +  +A+ +    NV  P+ L  A+    +   + +
Sbjct: 72  FVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERR 131

Query: 120 IINVGSVTVAAPGPWAG--TYTASKAAL 145
           I+++ S   AA   +AG   Y A+KAAL
Sbjct: 132 ILHISS--GAARNAYAGWSVYCATKAAL 157

Length = 243

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 58.5 bits (141), Expect = 6e-11
 Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 16/170 (9%)

Query: 5   GIGHALARAFAASDCRVVAT--GRSKA----TMADLEQDP-RFFVQELDVLSEQSVQNVL 57
           GIG A+A   A +D  +VA   GR+K     T+ ++E +  + F+ E D+ S   V+ ++
Sbjct: 17  GIGRAIAMRLA-NDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLV 75

Query: 58  SNVLEKF------GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH 111
             +  +        +ID+LVNNAG+   G +        ++    N+  P  L+Q  +P 
Sbjct: 76  EQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPL 135

Query: 112 MAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +  R +G++IN+ S  V      +  Y  SK AL+++T  L   LG  GI
Sbjct: 136 L--RAEGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKHLGERGI 183

Length = 254

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 57.9 bits (140), Expect = 8e-11
 Identities = 48/171 (28%), Positives = 72/171 (42%), Gaps = 17/171 (9%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMAD------LEQDPRFFVQELDVLSEQSVQNVLS 58
           GIG A A   A     V    +     A        +   + FV + D+  E  V  + +
Sbjct: 12  GIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFT 71

Query: 59  NVLEKFGKIDVLVNNAGV---QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
            + +    +  LVNNAG+   QC   +  +    + +  +TNV G     +  V  MA +
Sbjct: 72  AIDQHDEPLAALVNNAGILFTQCT--VENLTAERINRVLSTNVTGYFLCCREAVKRMALK 129

Query: 116 KKGK---IINVGSVT--VAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             G    I+NV S    + APG +   Y ASK A+ +LT  L LE+   GI
Sbjct: 130 HGGSGGAIVNVSSAASRLGAPGEYV-DYAASKGAIDTLTTGLSLEVAAQGI 179

Length = 247

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 57.9 bits (140), Expect = 9e-11
 Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 10/166 (6%)

Query: 5   GIGHALARAFAAS-------DCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVL 57
           G+G A A   A         D        +KA + ++  D    + + DV  E  V+  +
Sbjct: 14  GLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADVSDEAQVEAYV 73

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAE-VPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
              +E+FG+ID   NNAG++    L E       ++  + N+ G    ++ V+  M  + 
Sbjct: 74  DATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFYGLEKVLKVMREQG 133

Query: 117 KGKIINVGSV-TVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            G I+N  SV  +   G  +G Y A+K  +  LT    +E G +GI
Sbjct: 134 SGMIVNTASVGGIRGVGNQSG-YAAAKHGVVGLTRNSAVEYGQYGI 178

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 57.2 bits (139), Expect = 1e-10
 Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 18/153 (11%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
           G IG A+A+  +A    V+  GRS                 +D+  E S++ +     EK
Sbjct: 8   GTIGLAVAQLLSAHGHEVITAGRSSGDYQ------------VDITDEASIKALF----EK 51

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
            G  D +V+ AG     PLAE+  +  ++  N+ + G + LV+  +P++     G I   
Sbjct: 52  VGHFDAIVSTAGDAEFAPLAELTDADFQRGLNSKLLGQINLVRHGLPYL--NDGGSITLT 109

Query: 124 GSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
             +    P P          AL        +EL
Sbjct: 110 SGILAQRPIPGGAAAATVNGALEGFVRAAAIEL 142

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 57.6 bits (140), Expect = 1e-10
 Identities = 41/171 (23%), Positives = 64/171 (37%), Gaps = 14/171 (8%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQE------------LDVLSEQS 52
           GIG A+A   A     +V   ++      L        +E             DV  E  
Sbjct: 17  GIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQ 76

Query: 53  VQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM 112
           V   ++  +E+FG ID+ VNNA    +    + P+   +     NV G   + QA +PH+
Sbjct: 77  VAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHL 136

Query: 113 AYRKKGKIINVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
              +   I+ +       P  +A    YT +K  +   T  L  E    GI
Sbjct: 137 KKSENPHILTLSPPLNLDPKWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGI 187

Length = 273

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 57.6 bits (139), Expect = 1e-10
 Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 9/159 (5%)

Query: 5   GIGHALARAFAASDCRVVATGRSK---ATMADLEQDPRFFVQELDVLSEQSVQNVLSNVL 61
           GIG  +A    A   +VV     +   + +A    +  +F+  +DV  E  V   ++ VL
Sbjct: 21  GIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIA-MDVADEAQVAAGVAEVL 79

Query: 62  EKFGKIDVLVNNAGVQ--CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM-AYRKKG 118
            +FG++D LV NA +       L  + L+   +    N+ GPM L +   P++ A+   G
Sbjct: 80  GQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHN--G 137

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG 157
            I+N+ S       P    Y ASK  L +LT  L + LG
Sbjct: 138 AIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLG 176

Length = 255

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 57.4 bits (139), Expect = 2e-10
 Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 5/119 (4%)

Query: 46  DVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLV 105
           DV     V   +  V++ FG ++V+VNNAGV    P+  +     ++ +N NV G +  +
Sbjct: 59  DVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGI 118

Query: 106 QAVVPHMAYRKK---GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           QA     A++K    GKIIN  S       P    Y+++K A+  LT T   +L   GI
Sbjct: 119 QAAQE--AFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLASEGI 175

Length = 256

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 56.9 bits (137), Expect = 2e-10
 Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 8/165 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMAD--LEQDPR----FFVQELDVLSEQSVQNVL 57
           GGIG ++ +       +VVA     +      LE        F   E +V    S +   
Sbjct: 13  GGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAF 72

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             V  + G+IDVLVNNAG+       ++         +TN+     + + V+  M  R  
Sbjct: 73  DKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGW 132

Query: 118 GKIINVGSVTVAAPGPWAGT-YTASKAALHSLTDTLRLELGHFGI 161
           G+IIN+ SV     G +  T Y+ +KA +H  T +L  E+   G+
Sbjct: 133 GRIINISSVN-GQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGV 176

Length = 246

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 56.4 bits (136), Expect = 3e-10
 Identities = 53/169 (31%), Positives = 77/169 (45%), Gaps = 13/169 (7%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDP------RFFVQELDVLSEQSVQNVLS 58
           GIG A A   AA    V       A  A+   D       R  V   DV +E  V  +  
Sbjct: 13  GIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFD 72

Query: 59  NVLEKFGKIDVLVNNAG-VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
            V   FG++D LVNNAG V    PLA++  + + + F+TNV G     +     ++  + 
Sbjct: 73  AVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRG 132

Query: 118 GK---IINVGSVT--VAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G+   I+NV S+   + +P  +   Y  SK A+ +LT  L  ELG  G+
Sbjct: 133 GRGGAIVNVSSIASRLGSPNEYV-DYAGSKGAVDTLTLGLAKELGPHGV 180

Length = 248

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 56.1 bits (135), Expect = 5e-10
 Identities = 43/159 (27%), Positives = 67/159 (42%), Gaps = 6/159 (3%)

Query: 2   SQGGIGHALARAFAASDCRVVATG----RSKATMADLEQDPRFFVQELDVLSEQSVQNVL 57
           + GGIG  +AR   A    V   G    + +A  A+L +  + F   L    E  V+ + 
Sbjct: 14  ASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDE--VKALG 71

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
                    +D+LVNNAG+   G    +     +     N+    RL + +   M  R+ 
Sbjct: 72  QKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRY 131

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
           G+IIN+ SV      P    Y ASKA +   + +L  E+
Sbjct: 132 GRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEI 170

Length = 245

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 54.2 bits (131), Expect = 2e-09
 Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 20/166 (12%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLE-------QDPRFFVQELDVLSEQSVQNV 56
           G IG AL +A   +   V+A    K  + +L        +  +  + ELD+  ++S++  
Sbjct: 14  GLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEF 73

Query: 57  LSNVLEKFGKIDVLVNNA---GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMA 113
           LS   EK+GKID  VN A            +V L    +  + ++       Q    +  
Sbjct: 74  LSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFK 133

Query: 114 YRKKGKIINVGSVT-VAAPG--PWAGT-------YTASKAALHSLT 149
            +  G ++N+ S+  V AP    + GT       Y A KA +  LT
Sbjct: 134 KQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLT 179

Length = 256

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 54.2 bits (131), Expect = 2e-09
 Identities = 50/168 (29%), Positives = 73/168 (43%), Gaps = 14/168 (8%)

Query: 5   GIGHALARAFAAS--DCRVVA--TGRSKATMADLEQ---DPRFFVQELDVLSEQSVQNVL 57
           G+G  +AR FAA   D  + A  T R +   A+L       +  V  LDV     V  V 
Sbjct: 13  GLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVF 72

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
           +   ++ G +D ++ NAG+     L      A + T  TN      L Q       +R++
Sbjct: 73  AEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAA--LAQCEAAMEIFREQ 130

Query: 118 --GKIINVGSVTVA--APGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             G ++ + SV+     PG  A  Y ASKA + SL + LR EL    I
Sbjct: 131 GSGHLVLISSVSAVRGLPGVKA-AYAASKAGVASLGEGLRAELAKTPI 177

Length = 248

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 54.0 bits (130), Expect = 3e-09
 Identities = 36/161 (22%), Positives = 67/161 (41%), Gaps = 8/161 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPR-------FFVQELDVLSEQSVQNVL 57
           GIG  +A    A+   V+  GR+   +A   ++            +  DV  E  V   +
Sbjct: 18  GIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAV 77

Query: 58  SNVLEKFGKIDVLVNNAG-VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
                  G++  +V+ AG  + +GP+ ++   A  +T + NV G M +++     +    
Sbjct: 78  DAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGG 137

Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG 157
            G  + + S+  +    W G Y  +K+A+  L      ELG
Sbjct: 138 GGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELG 178

Length = 276

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 53.2 bits (128), Expect = 4e-09
 Identities = 40/165 (24%), Positives = 65/165 (39%), Gaps = 8/165 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRS-----KATMADLEQDPRFFVQ-ELDVLSEQSVQNVLS 58
           GIG  +A   A +   V             T   +E   R  +Q   DV S+  ++  ++
Sbjct: 19  GIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVA 78

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
               + G + + VN AG+    P  E+     +   + N+ G     QA    M     G
Sbjct: 79  RTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGG 138

Query: 119 KIINVGSV--TVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            I+N+ S+   +   G     Y ASKA +  L+ +L +E    GI
Sbjct: 139 SIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWVGRGI 183

Length = 254

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 53.1 bits (127), Expect = 5e-09
 Identities = 49/162 (30%), Positives = 74/162 (45%), Gaps = 10/162 (6%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVLSN 59
           GIG  +A A+  +  +V    R    +  L  +      +      DV   Q V ++L  
Sbjct: 20  GIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQ 79

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKG 118
           V  + G ID+ V NAG+  V P+ ++PL   ++  NTNV G     QA    M  + + G
Sbjct: 80  VTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGG 139

Query: 119 KIINVGSVT---VAAPGPWAGTYTASKAALHSLTDTLRLELG 157
            IIN  S++   +  P      Y ASKAA+  LT  + +EL 
Sbjct: 140 VIINTASMSGHIINVPQQ-VSHYCASKAAVIHLTKAMAVELA 180

Length = 253

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 52.6 bits (127), Expect = 6e-09
 Identities = 41/170 (24%), Positives = 62/170 (36%), Gaps = 25/170 (14%)

Query: 6   IGHALARAFAASDCRVVATGRSKATMADLEQD------PRFFVQELDVLSEQSVQNVLSN 59
           I  A AR +AA+  R+    R    +  L  D            ELD+L   S    L +
Sbjct: 13  IARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDS 72

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
           +       D+++   G        E   +   + F TN  GP+ L+  +      R  G 
Sbjct: 73  LPALP---DIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGT 129

Query: 120 IINVGSVTVAAPGPWAG--------TYTASKAALHSLTDTLRLELGHFGI 161
           I+ + SV        AG         Y ++KAAL +    LR  L   G+
Sbjct: 130 IVGISSV--------AGDRGRASNYVYGSAKAALTAFLSGLRNRLFKSGV 171

Length = 243

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 52.0 bits (125), Expect = 1e-08
 Identities = 37/161 (22%), Positives = 66/161 (40%), Gaps = 11/161 (6%)

Query: 5   GIGHALARAFAASDCRVVATGRSK----ATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           G+G A+A         V++  R++      +A+ + +       LD+     ++   + +
Sbjct: 12  GLGEAIANQLLEKGTHVISISRTENKELTKLAE-QYNSNLTFHSLDLQDVHELETNFNEI 70

Query: 61  LEKFGKIDV----LVNNAG-VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
           L    + +V    L+NNAG V  + P+ +     +    + N+  PM L    + H    
Sbjct: 71  LSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDW 130

Query: 116 KKGK-IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
           K  K +IN+ S     P      Y +SKA L   T T+  E
Sbjct: 131 KVDKRVINISSGAAKNPYFGWSAYCSSKAGLDMFTQTVATE 171

Length = 251

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 49.7 bits (119), Expect = 1e-07
 Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 11/116 (9%)

Query: 4   GGIGHALARAFA-ASDCRVVATGRSKA---------TMADLEQD-PRFFVQELDVLSEQS 52
           GGIG ALARA A     R+V  GRS           T+A LE    R      DV    +
Sbjct: 215 GGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLYISADVTDAAA 274

Query: 53  VQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAV 108
           V+ +L  V E++G ID +++ AGV     LA+      E      V G + L QA+
Sbjct: 275 VRRLLEKVRERYGAIDGVIHAAGVLRDALLAQKTAEDFEAVLAPKVDGLLNLAQAL 330

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 48.8 bits (117), Expect = 2e-07
 Identities = 45/157 (28%), Positives = 69/157 (43%), Gaps = 6/157 (3%)

Query: 6   IGHALARAFAASDCRV-VATGRS----KATMADLEQ-DPRFFVQELDVLSEQSVQNVLSN 59
           IG A+A   AA    V V   RS    +A  A++     R    + D+  E  V+ +++ 
Sbjct: 21  IGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVAR 80

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
                G I +LVNNA +      A    ++ ++   TN+  P  L QA    +    +G 
Sbjct: 81  ASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGL 140

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
           ++N+    V    P   +YT SKAAL + T TL   L
Sbjct: 141 VVNMIDQRVWNLNPDFLSYTLSKAALWTATRTLAQAL 177

Length = 258

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 48.8 bits (117), Expect = 2e-07
 Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 6/162 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSK----ATMADLEQD-PRFFVQELDVLSEQSVQNVLSN 59
           GI   +A+AFA +   V    RS+    A +A L+Q  P       DV    +V+   + 
Sbjct: 20  GINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQ 79

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
           + ++FG IDVLV+ A      P A +  +  +   + ++ G   +++A  P +  R    
Sbjct: 80  IADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLR-RPGAS 138

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           II + +     P P      A+KA +  LT TL LE G  GI
Sbjct: 139 IIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALEWGPEGI 180

Length = 264

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 48.4 bits (115), Expect = 2e-07
 Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 10/158 (6%)

Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------PRFFVQELDVLS---EQS 52
           +  G+G  +A+A+AA+   V+   R +  +  +         P  F    D++S   ++ 
Sbjct: 14  ASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEF 73

Query: 53  VQNVLSNVLEKFGKIDVLVNNAG-VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH 111
            Q   +      GK+D +V+ AG    + PL    ++     +  N   PM L +A+ P 
Sbjct: 74  EQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPL 133

Query: 112 MAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLT 149
           +       +I VG      P  + G + ASKAAL+ L 
Sbjct: 134 LKQSPDASVIFVGESHGETPKAYWGGFGASKAALNYLC 171

Length = 239

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 47.8 bits (114), Expect = 3e-07
 Identities = 45/159 (28%), Positives = 65/159 (40%), Gaps = 8/159 (5%)

Query: 5   GIGHALARAFAASDCRVVAT-GRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
           GIG A+ R F      V  T   SK     L Q+      + D     +V +V+      
Sbjct: 17  GIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRK---- 72

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
            G +D+LV NAG+   G   E+    +++ F  N+  P          M   + G+II +
Sbjct: 73  SGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQM--PEGGRIIII 130

Query: 124 GSVTV-AAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           GSV     P      Y ASK+AL  +   L  + G  GI
Sbjct: 131 GSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGI 169

Length = 237

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 48.0 bits (115), Expect = 4e-07
 Identities = 38/168 (22%), Positives = 68/168 (40%), Gaps = 16/168 (9%)

Query: 5   GIGHALARAFAASDCRVVATG---RSKATMADL-EQDPRFFVQELDVLSEQSVQNVLSNV 60
            I   +A+A A     +  T    R +  + +L E+     V   DV +++S+  + + +
Sbjct: 19  SIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATI 78

Query: 61  LEKFGKIDVLVNNAGV----QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
            +K+GK+D LV++       +  G   +          + + +    L +A  P M    
Sbjct: 79  KKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLM--NN 136

Query: 117 KGKIINV---GSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            G I+ +   GS  V    P       +KAAL +    L  +LG  GI
Sbjct: 137 GGSILTLTYLGSERVV---PNYNVMGVAKAALEASVRYLAADLGKEGI 181

Length = 259

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 47.8 bits (114), Expect = 4e-07
 Identities = 38/163 (23%), Positives = 66/163 (40%), Gaps = 7/163 (4%)

Query: 6   IGHALARAFAASDCRVVA---TGRSKATMAD---LEQDPRFFVQELDVLSEQSVQNVLSN 59
           +G  L    A +   V        +   +AD    E   + +    D  +EQSV  +   
Sbjct: 14  LGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFGADATNEQSVIALSKG 73

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM-AYRKKG 118
           V E F ++D+LV +AG+     + +  L   +++   N+ G     +     M     +G
Sbjct: 74  VDEIFKRVDLLVYSAGIAKSAKITDFELGDFDRSLQVNLVGYFLCAREFSKLMIRDGIQG 133

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +II + S +          Y+A+K     LT +L L+L   GI
Sbjct: 134 RIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEHGI 176

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 48.1 bits (115), Expect = 4e-07
 Identities = 34/129 (26%), Positives = 54/129 (41%), Gaps = 9/129 (6%)

Query: 5   GIGHALARAFAASDCRVVA----TGRSKATMADLEQ---DPRFFVQELDVLSEQSVQNVL 57
           G+G+  A A AA    VV       + KA  A +          +QELD+ S  SV+   
Sbjct: 27  GLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAA 86

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             +   + +ID+L+NNAGV  +    +      E  F TN  G   L   ++  +     
Sbjct: 87  DALRAAYPRIDLLINNAGV--MYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPG 144

Query: 118 GKIINVGSV 126
            +++ V S 
Sbjct: 145 SRVVTVSSG 153

Length = 306

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 47.9 bits (114), Expect = 4e-07
 Identities = 35/135 (25%), Positives = 51/135 (37%), Gaps = 15/135 (11%)

Query: 5   GIGHALARAFAASD-------CRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVL 57
           G+G A A+A A          CR        A    + +D  + V   D+ S  SV+  +
Sbjct: 12  GLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEVGMPKD-SYSVLHCDLASLDSVRQFV 70

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPL---SAMEQTFNTNVFGPMRLVQAVVPHMAY 114
            N       +D LV NA V    P A+ P       E T   N  G   L   ++  +  
Sbjct: 71  DNFRRTGRPLDALVCNAAVYL--PTAKEPRFTADGFELTVGVNHLGHFLLTNLLLEDLQR 128

Query: 115 R--KKGKIINVGSVT 127
                 +I+ VGS+T
Sbjct: 129 SENASPRIVIVGSIT 143

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 47.4 bits (113), Expect = 5e-07
 Identities = 52/180 (28%), Positives = 74/180 (41%), Gaps = 24/180 (13%)

Query: 4   GGIGHALARAFAASDCRVVAT--GRSKATMADLEQDPRFFVQEL------------DVLS 49
           GGIG A A AFAA   RVV    G      A      +  V E+            D+  
Sbjct: 16  GGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIAD 75

Query: 50  EQSVQNVLSNVLEKFGKIDVLVNNAGV---QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQ 106
                N++   +E FG +DVLVNNAG+   + +  ++E    A+        F  +R   
Sbjct: 76  WDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAA 135

Query: 107 AVVPHMAYRKKGK-----IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           A     +  K G+     IIN  S          G Y+A+KA + +LT     ELG +G+
Sbjct: 136 AYWRAES--KAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAGIAALTLVAAAELGRYGV 193

Length = 286

>gnl|CDD|219950 pfam08643, DUF1776, Fungal family of unknown function (DUF1776)

 Score = 46.2 bits (110), Expect = 1e-06
 Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 3/87 (3%)

Query: 79  VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM--AYRKKGKIINVG-SVTVAAPGPWA 135
            GP+  +P S+     NT +   +  +Q ++P +     +K K+I    S++ +   P+ 
Sbjct: 106 SGPIENIPPSSWASELNTRLLNYILTLQGLLPLLTSRSSQKSKLIVFNPSISSSLNPPYH 165

Query: 136 GTYTASKAALHSLTDTLRLELGHFGID 162
                  +AL +    L  EL    ID
Sbjct: 166 APEALVSSALSTFFTILTRELRPHNID 192

This is a fungal family of unknown function. One of the proteins in this family has been localised to the mitochondria. Length = 298

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 46.2 bits (109), Expect = 1e-06
 Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 5/114 (4%)

Query: 51  QSVQNVLSNVLEK---FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQA 107
           +++ + L N L+      K D+L+NNAG+     + E      ++  + N   P  ++Q 
Sbjct: 70  EALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQ 129

Query: 108 VVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            +  +  R   +IIN+ S       P    Y+ +K A++++T TL  +LG  GI
Sbjct: 130 ALSRL--RDNSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGARGI 181

Length = 252

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 45.7 bits (109), Expect = 2e-06
 Identities = 35/167 (20%), Positives = 57/167 (34%), Gaps = 26/167 (15%)

Query: 6   IGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFG 65
           IG  L R        V+  GR + + +      RF   E D+    +++ +L+ V     
Sbjct: 10  IGSHLVRRLLQEGYEVIVLGRRRRSESLNTGRIRFH--EGDLTDPDALERLLAEV----- 62

Query: 66  KIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGS 125
           + D +++ A    VG   E P          NV G +RL++A           + +   S
Sbjct: 63  QPDAVIHLAAQSGVGASFEDP----ADFIRANVLGTLRLLEA----ARRAGVKRFVFASS 114

Query: 126 VTV---AAPGPWAGT--------YTASKAALHSLTDTLRLELGHFGI 161
             V    A  P            Y A+K A   L +      G   +
Sbjct: 115 SEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYARAYGLRAV 161

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 45.5 bits (108), Expect = 2e-06
 Identities = 38/162 (23%), Positives = 65/162 (40%), Gaps = 9/162 (5%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           G+G+A+A        +V    R+    K     L +         DV S +S +NV+   
Sbjct: 16  GLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKA 75

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
            +    ID LV   G      + E   S +E+    ++  P+  V A +  +  ++   I
Sbjct: 76  AKVLNAIDGLVVTVGGYVEDTVEE--FSGLEEMLTNHIKIPLYAVNASLRFL--KEGSSI 131

Query: 121 INVGSVT-VAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           + V S++ +    P   +Y  +KA L    + L  EL   GI
Sbjct: 132 VLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRGI 173

Length = 238

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 45.1 bits (107), Expect = 3e-06
 Identities = 22/78 (28%), Positives = 37/78 (47%)

Query: 46  DVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLV 105
           D+  E  V+  +   +EKFG ID+LVNNA    +    + P+   +     N  G     
Sbjct: 67  DIRDEDQVRAAVEKAVEKFGGIDILVNNASAISLTGTLDTPMKRYDLMMGVNTRGTYLCS 126

Query: 106 QAVVPHMAYRKKGKIINV 123
           +A +P++   K   I+N+
Sbjct: 127 KACLPYLKKSKNPHILNL 144

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|181609 PRK09009, PRK09009, C factor cell-cell signaling protein; Provisional

 Score = 45.1 bits (107), Expect = 3e-06
 Identities = 51/166 (30%), Positives = 75/166 (45%), Gaps = 24/166 (14%)

Query: 4   GGIGHALARAFAA--SDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVL 61
           GGIG A+ +       D  V AT R      D + D   +   LDV  E  ++  LS   
Sbjct: 10  GGIGKAMVKQLLERYPDATVHATYRH--HKPDFQHDNVQWHA-LDVTDEAEIKQ-LS--- 62

Query: 62  EKFGKIDVLVNNAGV---QCVGPLAEVPLSAME-----QTFNTNVFGPMRLVQAVVPHM- 112
           E+F ++D L+N  G+   Q  GP  E  L A++     Q    N    + L +   P + 
Sbjct: 63  EQFTQLDWLINCVGMLHTQDKGP--EKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLK 120

Query: 113 -AYRKKGKIIN--VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
            +   K  +I+  VGS++    G W  +Y ASKAAL+    TL +E
Sbjct: 121 QSESAKFAVISAKVGSISDNRLGGWY-SYRASKAALNMFLKTLSIE 165

Length = 235

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 45.4 bits (107), Expect = 3e-06
 Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 3/117 (2%)

Query: 46  DVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGP-LAEVPLSAMEQTFNTNVFGPMRL 104
           D+  E+  ++++    +  G +D++   AG Q   P +A++     ++TF  NVF    L
Sbjct: 108 DLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWL 167

Query: 105 VQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            Q  +P +   K   II   S+    P P    Y A+KAA+ + +  L  ++   GI
Sbjct: 168 TQEAIPLL--PKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGI 222

Length = 294

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 45.1 bits (107), Expect = 4e-06
 Identities = 34/122 (27%), Positives = 50/122 (40%), Gaps = 3/122 (2%)

Query: 5   GIGHALARAFAASDCRVVATGRSKAT-MADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
           G+G    RA A +   V+   R        L       V  LD+   +SV+      L+ 
Sbjct: 37  GLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDS 96

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
             +ID+L+NNAGV    P   V     E  F TN  G   LV  + P +A     +++ +
Sbjct: 97  GRRIDILINNAGVMAC-PETRVG-DGWEAQFATNHLGHFALVNLLWPALAAGAGARVVAL 154

Query: 124 GS 125
            S
Sbjct: 155 SS 156

Length = 315

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 44.4 bits (105), Expect = 5e-06
 Identities = 27/129 (20%), Positives = 46/129 (35%), Gaps = 21/129 (16%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           GIG A A     +   V+     +A            V   D+ + +     +++VL + 
Sbjct: 10  GIGAATAELLEDAGHTVIGIDLREA-----------DVIA-DLSTPEGRAAAIADVLARC 57

Query: 65  GK-IDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
              +D LVN AGV           +        N FG   L++A++P +        + V
Sbjct: 58  SGVLDGLVNCAGVG--------GTTVAGLVLKVNYFGLRALMEALLPRLRKGHGPAAVVV 109

Query: 124 GSVTVAAPG 132
            S+  A   
Sbjct: 110 SSIAGAGWA 118

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 44.3 bits (105), Expect = 5e-06
 Identities = 48/151 (31%), Positives = 63/151 (41%), Gaps = 19/151 (12%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLE-QDPRFFVQELDVLSEQSVQNVLSNVLEK 63
           GIG    R + A   RV+AT R  A +A L+          LDV    SV    + +  K
Sbjct: 12  GIGREFVRQYRADGWRVIATARDAAALAALQALGAEALA--LDVADPASV----AGLAWK 65

Query: 64  FG--KIDVLVNNAGVQCVGPLAE-VPLSAMEQ---TFNTNVFGPMRLVQAVVPHMAYRKK 117
                +D  V  AGV   GP  E V     E      +TNV GPM+L+  ++P +     
Sbjct: 66  LDGEALDAAVYVAGV--YGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLP-LVEAAG 122

Query: 118 GKIINVGS---VTVAAPGPWAGTYTASKAAL 145
           G +  + S       A G     Y ASKAAL
Sbjct: 123 GVLAVLSSRMGSIGDATGTTGWLYRASKAAL 153

Length = 222

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 44.4 bits (106), Expect = 6e-06
 Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 10/163 (6%)

Query: 5   GIGHALARAFAASDCRVV-----ATGRS-KATMADLEQDPRFFVQELDVLSEQSVQNVLS 58
           GIG A+A   A     VV     A G +  A    +       +  LD+ +  +   +  
Sbjct: 221 GIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTA---LA-LDITAPDAPARIAE 276

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
           ++ E+ G +D++V+NAG+     LA +  +  +     N+  P+R+ +A++   A    G
Sbjct: 277 HLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGG 336

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +I+ V S++  A       Y ASKA +  L   L   L   GI
Sbjct: 337 RIVGVSSISGIAGNRGQTNYAASKAGVIGLVQALAPLLAERGI 379

Length = 450

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 44.1 bits (105), Expect = 6e-06
 Identities = 41/166 (24%), Positives = 66/166 (39%), Gaps = 19/166 (11%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQ-----------DPRFFVQELDVLSEQSV 53
           GIG   A  +A     V+  GR   T   LE             P     +L   + Q+ 
Sbjct: 23  GIGREAALTYARHGATVILLGR---TEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNY 79

Query: 54  QNVLSNVLEKFGKIDVLVNNAGV-QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM 112
           Q +   + E+FG++D +++NAG+   +GP+ +      +     NV     L QA++P +
Sbjct: 80  QQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLL 139

Query: 113 AYRKKGKIINVGSVTVAAPGP--WAGTYTASKAALHSLTDTLRLEL 156
                  ++   S +V   G   W G Y  SK A   +   L  E 
Sbjct: 140 LKSPAASLVFTSS-SVGRQGRANW-GAYAVSKFATEGMMQVLADEY 183

Length = 247

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 44.2 bits (104), Expect = 8e-06
 Identities = 41/163 (25%), Positives = 66/163 (40%), Gaps = 6/163 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPR---FFVQEL--DVLSEQSVQNVLSN 59
           GIG A    FA    RVV     K  +       R   F V  +  DV   + V ++   
Sbjct: 17  GIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADE 76

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH-MAYRKKG 118
                G +DV+ +NAG+   GP+ E+         + +++G +  V+A +P  +     G
Sbjct: 77  AFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGG 136

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            ++   S     P    G Y  +K  +  L +TL  E+   GI
Sbjct: 137 HVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGI 179

Length = 275

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 43.6 bits (103), Expect = 1e-05
 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 11/131 (8%)

Query: 5   GIGHALARAFAASDCRVVAT----GRSKATMADLEQDPR---FFVQELDVLSEQSVQNVL 57
           GIG   AR  A    RV+       + +   A++ +D       V+ LD+ S +S++   
Sbjct: 12  GIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLDLASLKSIRAFA 71

Query: 58  SNVLEKFGKIDVLVNNAGV-QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
           +  L +  ++DVL+NNAGV +C     E      E  F  N  G   L   ++  +    
Sbjct: 72  AEFLAEEDRLDVLINNAGVMRCPYSKTE---DGFEMQFGVNHLGHFLLTNLLLDLLKKSA 128

Query: 117 KGKIINVGSVT 127
             +I+NV S+ 
Sbjct: 129 PSRIVNVSSLA 139

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 43.0 bits (101), Expect = 2e-05
 Identities = 35/128 (27%), Positives = 49/128 (38%), Gaps = 9/128 (7%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVL 57
           GIG   AR+FA     V+   R+ +  +             R     LD+ S +SVQ   
Sbjct: 12  GIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLDLASLRSVQRFA 71

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
                K   + VLV NA V    P   +    +E TF  N  G   LVQ +   +     
Sbjct: 72  EAFKAKNSPLHVLVCNAAV-FALPWT-LTEDGLETTFQVNHLGHFYLVQLLEDVLRRSAP 129

Query: 118 GKIINVGS 125
            ++I V S
Sbjct: 130 ARVIVVSS 137

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 40/169 (23%), Positives = 71/169 (42%), Gaps = 17/169 (10%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSN 59
            I   +A+A   +   +  T + +A    +E+          V   DV +++ ++ + + 
Sbjct: 14  SIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLGESALVLPCDVSNDEEIKELFAE 73

Query: 60  VLEKFGKIDVLVNNAG----VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
           V + +GK+D LV++      VQ  GP  +       +  + + +  + L +A +P M   
Sbjct: 74  VKKDWGKLDGLVHSIAFAPKVQLKGPFLDTSRKGFLKALDISAYSLVSLAKAALPIMN-- 131

Query: 116 KKGKIIN---VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             G I+    +GS  V    P       +KAAL S    L  ELG  GI
Sbjct: 132 PGGSIVTLSYLGSERVV---PGYNVMGVAKAALESSVRYLAYELGRKGI 177

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 42.9 bits (101), Expect = 2e-05
 Identities = 38/167 (22%), Positives = 67/167 (40%), Gaps = 9/167 (5%)

Query: 2   SQGGIGHALARAFAASDCRVVATGRS-----KATMADLEQDPR--FFVQELDVLSEQSVQ 54
           S  GIG  +AR  A +   V+   R+     KA      +      ++   D+   + ++
Sbjct: 16  SSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVA-DLTKREDLE 74

Query: 55  NVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY 114
             +  +    G+ D+   + G    G   E+ +   E      ++  + L +A+VP M  
Sbjct: 75  RTVKELKN-IGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMER 133

Query: 115 RKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +  G+II   SV +  P P        + ++  L  TL  ELG  GI
Sbjct: 134 KGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELGPKGI 180

Length = 263

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 42.6 bits (100), Expect = 3e-05
 Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 9/128 (7%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD-------PRFFVQELDVLSEQSVQNVL 57
           GIG A A A A     V    R++    +  ++          F+  +D+   + V   +
Sbjct: 12  GIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVDMSDPKQVWEFV 71

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
               E+  K+ VL+NNAG  C+    E+    +E+ F TN  G   L   ++P +   + 
Sbjct: 72  EEFKEEGKKLHVLINNAG--CMVNKRELTEDGLEKNFATNTLGTYILTTHLIPVLEKEED 129

Query: 118 GKIINVGS 125
            ++I V S
Sbjct: 130 PRVITVSS 137

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 41.6 bits (98), Expect = 5e-05
 Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 18/85 (21%)

Query: 2  SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQEL------------DVLS 49
          S  GIG   A+  A +   VV   R KA  A+        V E+            D+  
Sbjct: 14 SSRGIGADTAKILAGAGAHVVVNYRQKAPRANK------VVAEIEAAGGRASAVGADLTD 67

Query: 50 EQSVQNVLSNVLEKFGKIDVLVNNA 74
          E+SV  ++    E+FG +D LV NA
Sbjct: 68 EESVAALMDTAREEFGGLDALVLNA 92

Length = 248

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 40.9 bits (96), Expect = 9e-05
 Identities = 41/171 (23%), Positives = 65/171 (38%), Gaps = 15/171 (8%)

Query: 5   GIGHALARAFAASDCRVVATGRS-----KATMADLEQDP-RFFVQELDVLSEQSVQNVLS 58
           GIG  +A     +   V  TGR+       T  ++E    +      D   +  V+ +  
Sbjct: 14  GIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPVRCDHSDDDEVEALFE 73

Query: 59  NV-LEKFGKIDVLVNNA--GVQCVG-----PLAEVPLSAMEQTFNTNVFGPMRLVQAVVP 110
            V  E+ G++D+LVNNA   VQ +      P  E P +  +   N  +           P
Sbjct: 74  RVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDINNVGLRAHYACSVYAAP 133

Query: 111 HMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            M    KG I+ + S T      +   Y   KAA+  +   +  EL   G+
Sbjct: 134 LMVKAGKGLIVII-SSTGGLEYLFNVAYGVGKAAIDRMAADMAHELKPHGV 183

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 40.3 bits (94), Expect = 1e-04
 Identities = 37/159 (23%), Positives = 65/159 (40%), Gaps = 7/159 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMAD------LEQDPRFFVQELDVLSEQSVQNVLS 58
           GIG A+A   AA    +     S  + A+        Q     + + DV    + + +L 
Sbjct: 9   GIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLE 68

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQ-AVVPHMAYRKK 117
             + + G    +V NAG+        +     +   +TN+ G   ++    +P +  R+ 
Sbjct: 69  ADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQG 128

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
           G+II + SV+          Y+A+KA L   T  L +EL
Sbjct: 129 GRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVEL 167

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 39.9 bits (93), Expect = 2e-04
 Identities = 48/194 (24%), Positives = 63/194 (32%), Gaps = 48/194 (24%)

Query: 6   IGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQS---VQNVLSNV-- 60
           IG ++A A      RVV      A              EL+     S    Q  LSN   
Sbjct: 13  IGSSIAVALHQEGYRVVLHYHRSA------AAASTLAAELNARRPNSAVTCQADLSNSAT 66

Query: 61  ------------LEKFGKIDVLVNNAGVQCVGPL-----------AEVPLSAMEQTFNTN 97
                          FG+ DVLVNNA      PL            +     + + F +N
Sbjct: 67  LFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSN 126

Query: 98  VFGPMRLVQAVVPHMAYRKKGK----------IINVGSVTVAAPGPWAGTYTASKAALHS 147
              P  L++A     A R+ G           I+N+       P      YT +K AL  
Sbjct: 127 AIAPYFLIKA----FAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMAKHALEG 182

Query: 148 LTDTLRLELGHFGI 161
           LT +  LEL    I
Sbjct: 183 LTRSAALELAPLQI 196

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 39.5 bits (93), Expect = 3e-04
 Identities = 28/104 (26%), Positives = 41/104 (39%), Gaps = 20/104 (19%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
           G +G AL R        V+ TGRS           R  + +LD+    +V+  + +    
Sbjct: 9   GMLGRALVRLLKERGYEVIGTGRS-----------RASLFKLDLTDPDAVEEAIRDY--- 54

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQA 107
             K DV++N A    V    E   S  E  +  NV  P  L +A
Sbjct: 55  --KPDVIINCAAYTRV-DKCE---SDPELAYRVNVLAPENLARA 92

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 39.0 bits (91), Expect = 4e-04
 Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 19/173 (10%)

Query: 2   SQGGIGHALARAFAASDCRVVATGRS----KATMADLEQDPRFFVQELDVLSEQSVQNVL 57
           S  GIG  +AR       RVV + R+    +  + +L++    +  + D+  +  ++N++
Sbjct: 8   SSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLV 67

Query: 58  SNVLEKFGKIDVLVNNAG-VQCVGPLAEVPLSAMEQTFNT-------NVFGPMRLVQAVV 109
               E  G ID LV NAG V+C       P    E  ++        ++  P  L   ++
Sbjct: 68  KEAWELLGGIDALVWNAGNVRC------EPCMLHEAGYSDWLEAALLHLVAPGYLTTLLI 121

Query: 110 PHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
                +K KG ++ + SV+V  P P       ++A L  L   +    G  GI
Sbjct: 122 QAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQLAKGVSRTYGGKGI 174

Length = 259

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 38.3 bits (90), Expect = 5e-04
 Identities = 28/117 (23%), Positives = 44/117 (37%), Gaps = 17/117 (14%)

Query: 4   GGIGHALARAFAASDCR-VVATGRSKATMADLEQDPRFFVQEL------------DVLSE 50
           GG+G  LAR  A    R +V   RS A   + E      + EL            DV   
Sbjct: 10  GGLGLELARWLAERGARHLVLLSRSGAPDPEAEA----LLAELEARGAEVTVVACDVSDR 65

Query: 51  QSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQA 107
            +V+ +L+ +      +  +++ AGV     LA +      +     V G   L +A
Sbjct: 66  DAVRALLAEIRADGPPLRGVIHAAGVLRDALLANMTAEDFARVLAPKVTGAWNLHEA 122

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|240642 cd12165, 2-Hacid_dh_6, Putative D-isomer specific 2-hydroxyacid dehydrogenases

 Score = 38.4 bits (90), Expect = 8e-04
 Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 2/49 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQS 52
           G IG  +AR   A   RV+   RS       +      + +LD   EQ+
Sbjct: 146 GHIGREIARLLKAFGMRVIGVSRSPKEDEGADFV--GTLSDLDEALEQA 192

2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Length = 314

>gnl|CDD|177654 PLN00015, PLN00015, protochlorophyllide reductase

 Score = 38.1 bits (89), Expect = 8e-04
 Identities = 42/137 (30%), Positives = 61/137 (44%), Gaps = 19/137 (13%)

Query: 5   GIGHALARAFAASD-------CRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVL 57
           G+G A A+A A +        CR        A  A + +D  + V  LD+ S  SV+  +
Sbjct: 8   GLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKD-SYTVMHLDLASLDSVRQFV 66

Query: 58  SNVLEKFGK-IDVLVNNAGVQCVGPLAEVPL---SAMEQTFNTNVFGPMRLVQAVVPHMA 113
            N   + G+ +DVLV NA V    P A+ P       E +  TN  G   L + ++  + 
Sbjct: 67  DN-FRRSGRPLDVLVCNAAVYL--PTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLK 123

Query: 114 ---YRKKGKIINVGSVT 127
              Y  K  II VGS+T
Sbjct: 124 KSDYPSKRLII-VGSIT 139

Length = 308

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 37.6 bits (88), Expect = 0.001
 Identities = 33/151 (21%), Positives = 56/151 (37%), Gaps = 12/151 (7%)

Query: 6   IGHALARAFAASDCRVVATGRSK-ATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           IG ALA    A    V+ + R+    +  L Q     +Q  D  +   +   +  + +  
Sbjct: 14  IGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQ-ADFSTNAGIMAFIDELKQHT 72

Query: 65  GKIDVLVNNAGVQCVGPLAEVP----LSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK- 119
             +  +++NA       LAE P       + +    +V  P  L  A+   +        
Sbjct: 73  DGLRAIIHNASDW----LAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAAS 128

Query: 120 -IINVGSVTVAAPGPWAGTYTASKAALHSLT 149
            II++    V         Y ASKAAL ++T
Sbjct: 129 DIIHITDYVVEKGSDKHIAYAASKAALDNMT 159

Length = 236

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 37.0 bits (86), Expect = 0.002
 Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 6/125 (4%)

Query: 41  FVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ----CVGPLAEVPLSAMEQTFNT 96
           +V ELDV   +  +++  ++ +  GKID +V++          G   E    A       
Sbjct: 58  YVYELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEI 117

Query: 97  NVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
           +V+  + L +A++P +       ++ +  +      P       +KAAL S    L ++L
Sbjct: 118 SVYSLIELTRALLPLL--NDGASVLTLSYLGGVKYVPHYNVMGVAKAALESSVRYLAVDL 175

Query: 157 GHFGI 161
           G  GI
Sbjct: 176 GKKGI 180

Length = 274

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 36.7 bits (86), Expect = 0.002
 Identities = 27/117 (23%), Positives = 40/117 (34%), Gaps = 17/117 (14%)

Query: 4   GGIGHALARAFAAS-DCRVVATGRSKATMADLEQDPRFFVQEL------------DVLSE 50
           GG+G ALAR  A     R+V   RS              + EL            DV   
Sbjct: 10  GGLGRALARWLAERGARRLVLLSRSGPD----APGAAALLAELEAAGARVTVVACDVADR 65

Query: 51  QSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQA 107
            ++  VL+ +    G +  +++ AGV   G LA +              G   L + 
Sbjct: 66  DALAAVLAAIPAVEGPLTGVIHAAGVLDDGVLASLTPERFAAVLAPKAAGAWNLHEL 122

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 37.0 bits (86), Expect = 0.002
 Identities = 35/165 (21%), Positives = 68/165 (41%), Gaps = 11/165 (6%)

Query: 6   IGHALARAFAASDCRVVA--------TGRSKATMADLE-QDPRFFVQELDVLSEQSVQNV 56
           +G  +AR  AA   + VA           ++ T+A ++    +    + D+ +  +V+ +
Sbjct: 20  LGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKL 79

Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
             +    FG+ D+ +N  G     P+ E+  +  ++ F  N       ++    H+    
Sbjct: 80  FDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLN--D 137

Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            GKI+ + +  + A  P+   Y  SKA +   T     E G  GI
Sbjct: 138 NGKIVTLVTSLLGAFTPFYSAYAGSKAPVEHFTRAASKEFGARGI 182

Length = 257

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 36.6 bits (85), Expect = 0.003
 Identities = 32/147 (21%), Positives = 58/147 (39%), Gaps = 25/147 (17%)

Query: 25  GRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC---- 78
           GR +  + +L +  +P  F+   DV  +  ++     + +K+GK+D+LV+     C    
Sbjct: 45  GRFEKKVRELTEPLNPSLFL-PCDVQDDAQIEETFETIKQKWGKLDILVH-----CLAFA 98

Query: 79  -----VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIIN---VGSVTVAA 130
                +G  +        +    + +    L +A  P M   + G I+    +G V    
Sbjct: 99  GKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLM--SEGGSIVTLTYLGGVRAI- 155

Query: 131 PGPWAGTYTASKAALHSLTDTLRLELG 157
             P       +KAAL +    L  ELG
Sbjct: 156 --PNYNVMGVAKAALEASVRYLAAELG 180

Length = 258

>gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs

 Score = 36.4 bits (85), Expect = 0.003
 Identities = 20/116 (17%), Positives = 42/116 (36%), Gaps = 17/116 (14%)

Query: 4   GGIGHALARAFAASDCR-VVATGRSKATMADLEQD-------PRFFVQELDVLSEQSVQN 55
           G IG  L R       + ++   R +  + +L ++        +      DV  ++ ++ 
Sbjct: 12  GSIGSELVRQILKFGPKKLIVFDRDENKLHELVRELRSRFPHDKLRFIIGDVRDKERLRR 71

Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH 111
                  K    D++ + A ++ V P  E           TNV G   ++ A + +
Sbjct: 72  AF-----KERGPDIVFHAAALKHV-PSMEDNPEEA---IKTNVLGTKNVIDAAIEN 118

UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 36.5 bits (84), Expect = 0.004
 Identities = 32/154 (20%), Positives = 48/154 (31%), Gaps = 28/154 (18%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
           G IG  L     A+   V    R +  +  L     F    LD+     V  +       
Sbjct: 10  GFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGVEFV--VLDLTDRDLVDELAK----- 62

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
            G  D +++ A    V        S   +  + NV G + L++A     A   K + +  
Sbjct: 63  -GVPDAVIHLAAQSSVPDSNA---SDPAEFLDVNVDGTLNLLEAAR---AAGVK-RFVFA 114

Query: 124 GSVTVAAPGP-------------WAGTYTASKAA 144
            SV+V    P                 Y  SK A
Sbjct: 115 SSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLA 148

Length = 314

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	162
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.98
PRK06484	520	short chain dehydrogenase; Validated	99.98
PRK05650	270	short chain dehydrogenase; Provisional	99.98
PRK08263	275	short chain dehydrogenase; Provisional	99.98
PLN02780	320	ketoreductase/ oxidoreductase	99.98
PRK05855	582	short chain dehydrogenase; Validated	99.98
PRK06172	253	short chain dehydrogenase; Provisional	99.98
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.98
PRK07035	252	short chain dehydrogenase; Provisional	99.98
PRK07067	257	sorbitol dehydrogenase; Provisional	99.98
PRK08267	260	short chain dehydrogenase; Provisional	99.98
PRK05866	293	short chain dehydrogenase; Provisional	99.98
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.98
PRK06841	255	short chain dehydrogenase; Provisional	99.98
PRK12747	252	short chain dehydrogenase; Provisional	99.97
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.97
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.97
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.97
PRK07856	252	short chain dehydrogenase; Provisional	99.97
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.97
PRK07985	294	oxidoreductase; Provisional	99.97
PRK06194	287	hypothetical protein; Provisional	99.97
PRK06523	260	short chain dehydrogenase; Provisional	99.97
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.97
PRK12743	256	oxidoreductase; Provisional	99.97
PRK07576	264	short chain dehydrogenase; Provisional	99.97
PRK06482	276	short chain dehydrogenase; Provisional	99.97
PRK06125	259	short chain dehydrogenase; Provisional	99.97
PRK05693	274	short chain dehydrogenase; Provisional	99.97
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.97
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.97
PRK10538	248	malonic semialdehyde reductase; Provisional	99.97
PRK07454	241	short chain dehydrogenase; Provisional	99.97
PRK07890	258	short chain dehydrogenase; Provisional	99.97
PRK06128	300	oxidoreductase; Provisional	99.97
PRK08226	263	short chain dehydrogenase; Provisional	99.97
PRK06484	520	short chain dehydrogenase; Validated	99.97
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK05717	255	oxidoreductase; Validated	99.97
PRK07832	272	short chain dehydrogenase; Provisional	99.97
PRK06138	252	short chain dehydrogenase; Provisional	99.97
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.97
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.97
PRK07814	263	short chain dehydrogenase; Provisional	99.97
PRK07069	251	short chain dehydrogenase; Validated	99.97
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK06057	255	short chain dehydrogenase; Provisional	99.97
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.97
PRK08251	248	short chain dehydrogenase; Provisional	99.97
PLN00015	308	protochlorophyllide reductase	99.97
PRK06500	249	short chain dehydrogenase; Provisional	99.97
PRK09072	263	short chain dehydrogenase; Provisional	99.97
PRK05884	223	short chain dehydrogenase; Provisional	99.97
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.97
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.97
PRK07904	253	short chain dehydrogenase; Provisional	99.97
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.97
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.97
PRK06914	280	short chain dehydrogenase; Provisional	99.97
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.97
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.97
PRK08628	258	short chain dehydrogenase; Provisional	99.97
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.97
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.97
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.97
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.97
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK09186	256	flagellin modification protein A; Provisional	99.97
PRK12939	250	short chain dehydrogenase; Provisional	99.97
PRK05854	313	short chain dehydrogenase; Provisional	99.97
PRK07775	274	short chain dehydrogenase; Provisional	99.97
PRK06949	258	short chain dehydrogenase; Provisional	99.97
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.97
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.97
PRK06196	315	oxidoreductase; Provisional	99.97
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.97
PRK08703	239	short chain dehydrogenase; Provisional	99.97
PRK06197	306	short chain dehydrogenase; Provisional	99.97
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.97
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.97
PRK05875	276	short chain dehydrogenase; Provisional	99.96
PRK07102	243	short chain dehydrogenase; Provisional	99.96
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.96
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.96
PRK09134	258	short chain dehydrogenase; Provisional	99.96
PRK07774	250	short chain dehydrogenase; Provisional	99.96
PRK06101	240	short chain dehydrogenase; Provisional	99.96
PRK06701	290	short chain dehydrogenase; Provisional	99.96
PRK06181	263	short chain dehydrogenase; Provisional	99.96
PRK06123	248	short chain dehydrogenase; Provisional	99.96
PRK12744	257	short chain dehydrogenase; Provisional	99.96
PRK12937	245	short chain dehydrogenase; Provisional	99.96
PRK07023	243	short chain dehydrogenase; Provisional	99.96
PRK06198	260	short chain dehydrogenase; Provisional	99.96
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.96
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.96
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.96
PRK07201	657	short chain dehydrogenase; Provisional	99.96
PRK07578	199	short chain dehydrogenase; Provisional	99.96
PRK07074	257	short chain dehydrogenase; Provisional	99.96
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK12746	254	short chain dehydrogenase; Provisional	99.96
COG1028	251	FabG Dehydrogenases with different specificities (	99.96
PRK06940	275	short chain dehydrogenase; Provisional	99.96
PRK07326	237	short chain dehydrogenase; Provisional	99.96
PRK12742	237	oxidoreductase; Provisional	99.96
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.96
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.96
PRK07577	234	short chain dehydrogenase; Provisional	99.96
PRK06924	251	short chain dehydrogenase; Provisional	99.96
PRK07060	245	short chain dehydrogenase; Provisional	99.96
PRK12827	249	short chain dehydrogenase; Provisional	99.96
KOG1208	314	consensus Dehydrogenases with different specificit	99.96
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.96
PRK08324	681	short chain dehydrogenase; Validated	99.96
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.95
PRK07041	230	short chain dehydrogenase; Provisional	99.95
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.95
PRK08264	238	short chain dehydrogenase; Validated	99.95
PRK12828	239	short chain dehydrogenase; Provisional	99.95
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.95
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK08017	256	oxidoreductase; Provisional	99.95
PRK08177	225	short chain dehydrogenase; Provisional	99.95
PRK12829	264	short chain dehydrogenase; Provisional	99.95
PRK09291	257	short chain dehydrogenase; Provisional	99.95
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.95
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK09135	249	pteridine reductase; Provisional	99.95
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.95
PRK12367	245	short chain dehydrogenase; Provisional	99.94
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.93
PRK07806	248	short chain dehydrogenase; Provisional	99.93
PRK06953	222	short chain dehydrogenase; Provisional	99.93
PRK08219	227	short chain dehydrogenase; Provisional	99.92
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.91
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.91
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.9
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.9
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.9
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.89
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.89
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.88
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.81
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.8
PRK06720	169	hypothetical protein; Provisional	99.79
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.78
PLN02653	340	GDP-mannose 4,6-dehydratase	99.76
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.76
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.74
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.74
PLN03209	576	translocon at the inner envelope of chloroplast su	99.74
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.73
PLN02572	442	UDP-sulfoquinovose synthase	99.71
PLN00198	338	anthocyanidin reductase; Provisional	99.7
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.7
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.69
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.69
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.68
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.66
PLN02240	352	UDP-glucose 4-epimerase	99.66
PLN02650	351	dihydroflavonol-4-reductase	99.65
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.64
PLN02214	342	cinnamoyl-CoA reductase	99.64
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.63
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.63
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.62
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.62
PLN02583	297	cinnamoyl-CoA reductase	99.59
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.59
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.58
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.57
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.56
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.52
PLN02427	386	UDP-apiose/xylose synthase	99.52
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.52
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.52
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.51
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.5
PLN02686	367	cinnamoyl-CoA reductase	99.49
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.49
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.48
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.47
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.47
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.46
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.44
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.44
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.44
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.44
PLN02260	668	probable rhamnose biosynthetic enzyme	99.44
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.43
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.37
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.35
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.34
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.33
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.33
PLN02206	442	UDP-glucuronate decarboxylase	99.33
CHL00194	317	ycf39 Ycf39; Provisional	99.3
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.29
PLN02778	298	3,5-epimerase/4-reductase	99.26
PRK05865	854	hypothetical protein; Provisional	99.19
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.18
PRK07201	657	short chain dehydrogenase; Provisional	99.14
PLN02260	668	probable rhamnose biosynthetic enzyme	99.07
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.04
PRK08309	177	short chain dehydrogenase; Provisional	98.99
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.93
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	98.92
PLN02996	491	fatty acyl-CoA reductase	98.92
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	98.83
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	98.82
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.76
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	98.74
PRK12320	699	hypothetical protein; Provisional	98.7
PLN00016	378	RNA-binding protein; Provisional	98.69
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.64
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.63
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	98.58
COG3320	382	Putative dehydrogenase domain of multifunctional n	98.55
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.54
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.53
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.5
PLN02503	605	fatty acyl-CoA reductase 2	98.42
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.38
COG2910	211	Putative NADH-flavin reductase [General function p	98.3
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.23
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.22
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.19
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.18
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.11
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.04
PRK09620	229	hypothetical protein; Provisional	97.96
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	97.93
PLN00106	323	malate dehydrogenase	97.89
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.85
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.75
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.62
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.62
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.58
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.53
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.46
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.38
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.37
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	97.36
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.36
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.35
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.33
PTZ00325	321	malate dehydrogenase; Provisional	97.32
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	97.29
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.29
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.25
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.21
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	97.21
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	97.21
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.17
COG3268	382	Uncharacterized conserved protein [Function unknow	97.16
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.08
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.06
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	97.05
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	96.94
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.93
PRK05086	312	malate dehydrogenase; Provisional	96.91
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.83
PRK09496	453	trkA potassium transporter peripheral membrane com	96.83
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.81
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.8
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.8
PRK14982	340	acyl-ACP reductase; Provisional	96.8
COG0027	394	PurT Formate-dependent phosphoribosylglycinamide f	96.79
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.77
KOG2774	366	consensus NAD dependent epimerase [General functio	96.74
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.73
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.69
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.65
PRK10669	558	putative cation:proton antiport protein; Provision	96.58
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.58
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.54
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.53
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.43
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.4
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.35
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.32
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	96.28
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.25
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.22
TIGR01692	288	HIBADH 3-hydroxyisobutyrate dehydrogenase. This en	96.22
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.22
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	96.21
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.2
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.18
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	96.17
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.16
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.12
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.1
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.06
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.03
PRK04148	134	hypothetical protein; Provisional	96.03
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.03
COG4123	248	Predicted O-methyltransferase [General function pr	96.03
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.01
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.97
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	95.93
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	95.92
PRK09496	453	trkA potassium transporter peripheral membrane com	95.87
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	95.85
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.79
PRK14968	188	putative methyltransferase; Provisional	95.77
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	95.74
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	95.73
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	95.68
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	95.67
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.6
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	95.6
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	95.58
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.54
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	95.51
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.47
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.46
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	95.45
PRK03659	601	glutathione-regulated potassium-efflux system prot	95.43
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	95.43
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	95.39
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	95.36
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	95.36
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	95.34
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	95.27
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.26
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	95.24
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	95.23
PRK03562	621	glutathione-regulated potassium-efflux system prot	95.23
PRK08655	437	prephenate dehydrogenase; Provisional	95.22
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	95.21
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.19
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	95.18
PRK08223	287	hypothetical protein; Validated	95.18
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.17
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	95.16
TIGR00446	264	nop2p NOL1/NOP2/sun family putative RNA methylase.	95.15
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	95.15
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	95.14
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	95.09
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	95.08
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	95.08
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	95.06
PLN00203	519	glutamyl-tRNA reductase	95.0
PRK07417	279	arogenate dehydrogenase; Reviewed	94.99
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	94.99
PLN02688	266	pyrroline-5-carboxylate reductase	94.98
PLN02494	477	adenosylhomocysteinase	94.93
PRK06849	389	hypothetical protein; Provisional	94.92
PTZ00075	476	Adenosylhomocysteinase; Provisional	94.84
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	94.82
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	94.81
TIGR00873	467	gnd 6-phosphogluconate dehydrogenase, decarboxylat	94.81
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	94.8
TIGR03704	251	PrmC_rel_meth putative protein-(glutamine-N5) meth	94.79
PRK05442	326	malate dehydrogenase; Provisional	94.74
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	94.68
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	94.65
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	94.63
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	94.6
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	94.55
PLN02350	493	phosphogluconate dehydrogenase (decarboxylating)	94.52
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	94.51
PRK14901	434	16S rRNA methyltransferase B; Provisional	94.5
COG1023	300	Gnd Predicted 6-phosphogluconate dehydrogenase [Ca	94.43
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.37
PLN00112	444	malate dehydrogenase (NADP); Provisional	94.36
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	94.33
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	94.29
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	94.27
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	94.26
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	94.24
PRK12491	272	pyrroline-5-carboxylate reductase; Reviewed	94.19
PTZ00142	470	6-phosphogluconate dehydrogenase; Provisional	94.18
TIGR01724	341	hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome	94.16
PRK12480	330	D-lactate dehydrogenase; Provisional	94.15
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	94.14
KOG0409	327	consensus Predicted dehydrogenase [General functio	94.1
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.08
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	94.06
PRK07411	390	hypothetical protein; Validated	94.04
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	94.04
PLN02740	381	Alcohol dehydrogenase-like	94.03
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.01
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	94.0
PRK08328	231	hypothetical protein; Provisional	93.98
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	93.97
PF13649	101	Methyltransf_25: Methyltransferase domain; PDB: 3B	93.95
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	93.94
PLN02353	473	probable UDP-glucose 6-dehydrogenase	93.94
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	93.93
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	93.9
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	93.9
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	93.89
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	93.88
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	93.88
COG2130	340	Putative NADP-dependent oxidoreductases [General f	93.86
PRK14902	444	16S rRNA methyltransferase B; Provisional	93.85
PTZ00354	334	alcohol dehydrogenase; Provisional	93.84
PRK07680	273	late competence protein ComER; Validated	93.78
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	93.78
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	93.77
PRK14851	679	hypothetical protein; Provisional	93.76
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	93.74
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	93.73
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	93.72
PRK09287	459	6-phosphogluconate dehydrogenase; Validated	93.7
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	93.67
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	93.66
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	93.6
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	93.59
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	93.57
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	93.56
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	93.52
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	93.47
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	93.44
PRK14904	445	16S rRNA methyltransferase B; Provisional	93.39
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	93.39
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	93.38
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	93.29
PRK05708	305	2-dehydropantoate 2-reductase; Provisional	93.26
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	93.23
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	93.22
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	93.19
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	93.15
PRK12921	305	2-dehydropantoate 2-reductase; Provisional	93.06

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=2.2e-40  Score=227.55  Aligned_cols=162  Identities=37%  Similarity=0.544  Sum_probs=156.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCC---ceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDP---RFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~---~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      |||||||.++|++|++.|++|++++|+.+++++++.+.   .+.+...|++|.++++.+++.+.++|+++|++|||||..
T Consensus        13 GASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLvNNAGl~   92 (246)
T COG4221          13 GASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLA   92 (246)
T ss_pred             cCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccEEEecCCCC
Confidence            89999999999999999999999999999999998764   489999999999999999999999999999999999998


Q ss_pred             CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhc
Q 042185           78 CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                      ...++.+.+.++|+.++++|++|.++.+++.+|.|.+++.|.||++||.+|.++.|+...|+++|+++.+|...|++|+.
T Consensus        93 ~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~aV~~fs~~LR~e~~  172 (246)
T COG4221          93 LGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELA  172 (246)
T ss_pred             cCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHHHHHHHHHHHHHhc
Confidence            77999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCC
Q 042185          158 HFGID  162 (162)
Q Consensus       158 ~~gi~  162 (162)
                      .++||
T Consensus       173 g~~IR  177 (246)
T COG4221         173 GTGIR  177 (246)
T ss_pred             CCCee
Confidence            99987

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=1.9e-39  Score=228.33  Aligned_cols=162  Identities=32%  Similarity=0.513  Sum_probs=156.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC------CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      |||+|||.++|+.|+++|++|++++|+.+++++++.+      ..+.++.+|++++++++.+.+++.++.+++|++||||
T Consensus        13 GASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~IdvLVNNA   92 (265)
T COG0300          13 GASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGGPIDVLVNNA   92 (265)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCcccEEEECC
Confidence            8999999999999999999999999999999887663      5678999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |+...+++.+.++++.+.++++|+.+...++++++|.|.+++.|.||+|+|.+++.|.|..+.|++||+++.+|+++|+.
T Consensus        93 G~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa~v~~fSeaL~~  172 (265)
T COG0300          93 GFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALRE  172 (265)
T ss_pred             CcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++||+
T Consensus       173 EL~~~gV~  180 (265)
T COG0300         173 ELKGTGVK  180 (265)
T ss_pred             HhcCCCeE
Confidence            99999985

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.8e-38  Score=225.02  Aligned_cols=161  Identities=35%  Similarity=0.579  Sum_probs=150.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC------C-ceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------P-RFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~------~-~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      |||+|||.++|.+|+++|++++++.|+.++++.+.++      . ++.+++||++|.+++++.++++.+++|++|++|||
T Consensus        19 GASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg~vDvLVNN   98 (282)
T KOG1205|consen   19 GASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFGRVDVLVNN   98 (282)
T ss_pred             CCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcCCCCEEEec
Confidence            8999999999999999999999999988777766331      2 59999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      ||+......++.+.+++...|++|++|+++++++++|.|++++.|+||++||.+|..+.|..+.|++||+|+.+|+.+|+
T Consensus        99 AG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~ASK~Al~~f~etLR  178 (282)
T KOG1205|consen   99 AGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYSASKHALEGFFETLR  178 (282)
T ss_pred             CccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccchHHHHHHHHHHHHH
Confidence            99988778888999999999999999999999999999998888999999999999999999999999999999999999


Q ss_pred             HHhccCCC
Q 042185          154 LELGHFGI  161 (162)
Q Consensus       154 ~e~~~~gi  161 (162)
                      +|+.+.++
T Consensus       179 ~El~~~~~  186 (282)
T KOG1205|consen  179 QELIPLGT  186 (282)
T ss_pred             HHhhccCc
Confidence            99998774

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.1e-36  Score=211.14  Aligned_cols=161  Identities=23%  Similarity=0.334  Sum_probs=151.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC----CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD----PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||++|||+++|.+|+++|+++++.|.|.+..++..++    +.++.+.||+++.+++.+..+++++..|++|++|||||+
T Consensus        45 Ggg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI  124 (300)
T KOG1201|consen   45 GGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDVDILVNNAGI  124 (300)
T ss_pred             CCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCceEEEecccc
Confidence            8999999999999999999999999997765554432    469999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHh
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                      ....++.+.+.+++++.+++|+.+.+..+++|+|.|.+.++|.||.++|.+|..+.++..+|++||+|+.+|+++|..|+
T Consensus       125 ~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK~a~vGfhesL~~EL  204 (300)
T KOG1201|consen  125 VTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASKFAAVGFHESLSMEL  204 (300)
T ss_pred             ccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhHHHHHHHHHHHHHHH
Confidence            98899999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             ccCCC
Q 042185          157 GHFGI  161 (162)
Q Consensus       157 ~~~gi  161 (162)
                      ...+.
T Consensus       205 ~~~~~  209 (300)
T KOG1201|consen  205 RALGK  209 (300)
T ss_pred             HhcCC
Confidence            86553

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7e-35  Score=209.11  Aligned_cols=161  Identities=22%  Similarity=0.344  Sum_probs=148.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|++++|+.+.+++..+      ..++.++.+|++|+++++.+++++. ++|++|++|||+
T Consensus        15 Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~~g~iD~lv~na   93 (263)
T PRK08339         15 ASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-NIGEPDIFFFST   93 (263)
T ss_pred             CCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-hhCCCcEEEECC
Confidence            899999999999999999999999999877665432      2467889999999999999999985 589999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.+....|+++|+|+.+|+++++.
T Consensus        94 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asKaal~~l~~~la~  173 (263)
T PRK08339         94 GGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAK  173 (263)
T ss_pred             CCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHHHHHHHHHHHHHH
Confidence            98766788889999999999999999999999999999888789999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       174 el~~~gIr  181 (263)
T PRK08339        174 ELGPKGIT  181 (263)
T ss_pred             HhcccCeE
Confidence            99999986

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=9.7e-35  Score=192.58  Aligned_cols=162  Identities=28%  Similarity=0.303  Sum_probs=149.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC----CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD----PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||++|||++++..|+++|++|++.+++....++....    .....+.||+++..+++..+++..+.+|++++++||||+
T Consensus        21 Gg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvlVncAGI  100 (256)
T KOG1200|consen   21 GGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVLVNCAGI  100 (256)
T ss_pred             cCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcEEEEcCcc
Confidence            8999999999999999999999999998766655432    467789999999999999999999999999999999999


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhh--cCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY--RKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      .....+..++.++|+..+.+|+.+.+.++|++...|..  +++.+||++||+.+..+..++..|+++|+++.+|+|++++
T Consensus       101 trD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~GvIgftktaAr  180 (256)
T KOG1200|consen  101 TRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASKGGVIGFTKTAAR  180 (256)
T ss_pred             ccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhcCceeeeeHHHHH
Confidence            98888999999999999999999999999999998543  3456999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       181 Ela~knIr  188 (256)
T KOG1200|consen  181 ELARKNIR  188 (256)
T ss_pred             HHhhcCce
Confidence            99999997

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-33  Score=201.80  Aligned_cols=162  Identities=28%  Similarity=0.366  Sum_probs=148.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||++|||++++++|+++|++|++++|+.+..++...       ..++.++.+|++++++++.+++++.+.++++|++|||
T Consensus        14 Gas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~   93 (260)
T PRK07063         14 GAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNN   93 (260)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCCCcEEEEC
Confidence            899999999999999999999999999876665432       3467889999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      +|.....+..+.+.++|+..+++|+.+++.++++++|.|++++.++||++||..+..+.+....|+++|+++.+|+++++
T Consensus        94 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la  173 (260)
T PRK07063         94 AGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALG  173 (260)
T ss_pred             CCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHHHHHHHHHHHHHH
Confidence            99876667778899999999999999999999999999987778999999999999999999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       174 ~el~~~gIr  182 (260)
T PRK07063        174 IEYAARNVR  182 (260)
T ss_pred             HHhCccCeE
Confidence            999999986

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-33  Score=204.00  Aligned_cols=160  Identities=21%  Similarity=0.299  Sum_probs=140.5

Q ss_pred             CCC--CchHHHHHHHHHHCCCeEEEEecChh---hHHhhhcC-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQ--GGIGHALARAFAASDCRVVATGRSKA---TMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~--~giG~~ia~~l~~~g~~vi~~~r~~~---~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+  +|||+++|+.|+++|++|++++|+.+   .++++..+ ....++.+|++|.++++++++++.+++|++|++||||
T Consensus        12 Gas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~iDilVnnA   91 (274)
T PRK08415         12 GVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGKIDFIVHSV   91 (274)
T ss_pred             CCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            565  79999999999999999999999853   33333222 1116789999999999999999999999999999999


Q ss_pred             CCCCC----CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           75 GVQCV----GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        75 g~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      |+...    .++.+.+.++|++++++|+.+++.+++.++|.|++  +|+||++||..+..+.|.+..|+++|+|+.+|++
T Consensus        92 G~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~  169 (274)
T PRK08415         92 AFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSYLGGVKYVPHYNVMGVAKAALESSVR  169 (274)
T ss_pred             ccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCCccCCCcchhhhhHHHHHHHHHH
Confidence            97542    56788999999999999999999999999999964  4899999999999888999999999999999999


Q ss_pred             HHHHHhccCCCC
Q 042185          151 TLRLELGHFGID  162 (162)
Q Consensus       151 ~l~~e~~~~gi~  162 (162)
                      +++.|++++|||
T Consensus       170 ~la~el~~~gIr  181 (274)
T PRK08415        170 YLAVDLGKKGIR  181 (274)
T ss_pred             HHHHHhhhcCeE
Confidence            999999999986

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-33  Score=201.69  Aligned_cols=160  Identities=20%  Similarity=0.252  Sum_probs=141.7

Q ss_pred             CCC--CchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQ--GGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~--~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+  +|||+++|++|+++|++|++++|+.+..+.+.+  ...+.++++|++|+++++++++++.++++++|++|||||.
T Consensus        14 Gas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAg~   93 (252)
T PRK06079         14 GVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKIDGIVHAIAY   93 (252)
T ss_pred             CCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEEcccc
Confidence            677  799999999999999999999998432222221  2357789999999999999999999999999999999997


Q ss_pred             CCC----CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHH
Q 042185           77 QCV----GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTL  152 (162)
Q Consensus        77 ~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l  152 (162)
                      ...    .++.+.+.++|++.+++|+.+++.+++.++|.|++  .|+||++||..+..+.+.+..|+++|+|+.+|++++
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~~l  171 (252)
T PRK06079         94 AKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSERAIPNYNVMGIAKAALESSVRYL  171 (252)
T ss_pred             cccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCccccCCcchhhHHHHHHHHHHHHHH
Confidence            643    57788999999999999999999999999999953  589999999999888899999999999999999999


Q ss_pred             HHHhccCCCC
Q 042185          153 RLELGHFGID  162 (162)
Q Consensus       153 ~~e~~~~gi~  162 (162)
                      +.|++++|||
T Consensus       172 a~el~~~gI~  181 (252)
T PRK06079        172 ARDLGKKGIR  181 (252)
T ss_pred             HHHhhhcCcE
Confidence            9999999986

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.1e-34  Score=204.10  Aligned_cols=160  Identities=22%  Similarity=0.258  Sum_probs=140.3

Q ss_pred             CCCC--chHHHHHHHHHHCCCeEEEEecChhh---HHhhhcC-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQG--GIGHALARAFAASDCRVVATGRSKAT---MADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~--giG~~ia~~l~~~g~~vi~~~r~~~~---~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++  |||+++|++|+++|++|++++|+.+.   .+++..+ ....++++|++|.++++.+++++.+++|++|++||||
T Consensus        14 Gas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnA   93 (271)
T PRK06505         14 GVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGKLDFVVHAI   93 (271)
T ss_pred             CCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence            6775  99999999999999999999997532   2233222 2235789999999999999999999999999999999


Q ss_pred             CCCCC----CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           75 GVQCV----GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        75 g~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      |....    .++.+.+.++|++.+++|+.+++.++++++|.|++  +|+||++||..+..+.|.+..|+++|+|+.+|++
T Consensus        94 G~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaAl~~l~r  171 (271)
T PRK06505         94 GFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTRVMPNYNVMGVAKAALEASVR  171 (271)
T ss_pred             ccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCccccCCccchhhhhHHHHHHHHH
Confidence            97543    46778999999999999999999999999999963  4899999999998888999999999999999999


Q ss_pred             HHHHHhccCCCC
Q 042185          151 TLRLELGHFGID  162 (162)
Q Consensus       151 ~l~~e~~~~gi~  162 (162)
                      +|+.|++++|||
T Consensus       172 ~la~el~~~gIr  183 (271)
T PRK06505        172 YLAADYGPQGIR  183 (271)
T ss_pred             HHHHHHhhcCeE
Confidence            999999999986

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-33  Score=200.65  Aligned_cols=162  Identities=30%  Similarity=0.443  Sum_probs=145.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhh-H-Hhhhc-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKAT-M-ADLEQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~-~-~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      ||++|||+++|++|+++|++|++++|+... . ++... ..++.++.+|++++++++.+++++.+.++++|++|||+|..
T Consensus        15 Gas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~lv~~ag~~   94 (251)
T PRK12481         15 GCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDILINNAGII   94 (251)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence            899999999999999999999999986432 1 12221 35678899999999999999999999999999999999987


Q ss_pred             CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHh
Q 042185           78 CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                      ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ +|+||++||..+..+.+....|+++|+++.+|+++++.|+
T Consensus        95 ~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~  174 (251)
T PRK12481         95 RRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATEL  174 (251)
T ss_pred             CCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence            777888899999999999999999999999999997654 5899999999999988889999999999999999999999


Q ss_pred             ccCCCC
Q 042185          157 GHFGID  162 (162)
Q Consensus       157 ~~~gi~  162 (162)
                      +++|||
T Consensus       175 ~~~gir  180 (251)
T PRK12481        175 SQYNIN  180 (251)
T ss_pred             hhcCeE
Confidence            999986

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-33  Score=200.98  Aligned_cols=162  Identities=27%  Similarity=0.400  Sum_probs=149.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||++|||++++++|+++|++|++++|+.+.+++..+       ..++.++.+|++|.++++++++++.++++++|++|||
T Consensus        15 Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~   94 (265)
T PRK07062         15 GGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGVDMLVNN   94 (265)
T ss_pred             CCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            899999999999999999999999999876655432       2367789999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      ||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.+....|+++|+++.+|+++++
T Consensus        95 Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~asKaal~~~~~~la  174 (265)
T PRK07062         95 AGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAGLLNLVKSLA  174 (265)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHHHHHHHHHHHHHHH
Confidence            99877778888999999999999999999999999999988778999999999999999999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       175 ~e~~~~gi~  183 (265)
T PRK07062        175 TELAPKGVR  183 (265)
T ss_pred             HHhhhcCeE
Confidence            999999885

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-33  Score=205.21  Aligned_cols=162  Identities=34%  Similarity=0.492  Sum_probs=149.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||++++++|+++|++|++++|+.+.++++.+     ...+.++.+|++|.++++++++++.+.++++|++|||||
T Consensus        14 GAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG   93 (330)
T PRK06139         14 GASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRIDVWVNNVG   93 (330)
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            899999999999999999999999999887765543     346778899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      +...+++.+.+.++|++.+++|+.+++.+++.++|.|++++.|.||+++|..+..+.|....|+++|+++.+|+++|+.|
T Consensus        94 ~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asKaal~~~~~sL~~E  173 (330)
T PRK06139         94 VGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGE  173 (330)
T ss_pred             cCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHHHHHHHHHHHHHHH
Confidence            88778899999999999999999999999999999998887899999999999999999999999999999999999999


Q ss_pred             hccC-CCC
Q 042185          156 LGHF-GID  162 (162)
Q Consensus       156 ~~~~-gi~  162 (162)
                      +.+. ||+
T Consensus       174 l~~~~gI~  181 (330)
T PRK06139        174 LADHPDIH  181 (330)
T ss_pred             hCCCCCeE
Confidence            9874 764

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-33  Score=202.61  Aligned_cols=162  Identities=27%  Similarity=0.351  Sum_probs=145.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh---------hhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK---------ATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGK   66 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~---------~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   66 (162)
                      ||++|||+++|++|+++|++|++++++.         +.++++.+     ..++.++.+|++|+++++.+++++.+++++
T Consensus        13 Gas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   92 (286)
T PRK07791         13 GAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVDAAVETFGG   92 (286)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHhcCC
Confidence            8999999999999999999999998865         44433322     246778999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC------CCeEEEeccccccCCCCCchhhhH
Q 042185           67 IDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK------KGKIINVGSVTVAAPGPWAGTYTA  140 (162)
Q Consensus        67 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~iv~isS~~~~~~~~~~~~y~~  140 (162)
                      +|++|||||+....++.+.+.++|++.+++|+.+++.++++++|.|+++.      .|+||++||.++..+.+....|++
T Consensus        93 id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~a  172 (286)
T PRK07791         93 LDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSA  172 (286)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCCCCchhhHH
Confidence            99999999987777888999999999999999999999999999997542      379999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCCC
Q 042185          141 SKAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       141 sKaa~~~l~~~l~~e~~~~gi~  162 (162)
                      +|+|+++|+++++.|++++|||
T Consensus       173 sKaal~~l~~~la~el~~~gIr  194 (286)
T PRK07791        173 AKAGIAALTLVAAAELGRYGVT  194 (286)
T ss_pred             HHHHHHHHHHHHHHHHHHhCeE
Confidence            9999999999999999999985

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-33  Score=199.67  Aligned_cols=162  Identities=23%  Similarity=0.362  Sum_probs=148.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||++++++|+++|++|++++|+.+.+++..+     ..++.++.+|++|.++++++++++.++++++|++|||||
T Consensus        13 Gas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~li~nAg   92 (275)
T PRK05876         13 GGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAG   92 (275)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            899999999999999999999999999876665432     245788999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      ....+++.+.+.++|+..+++|+.+++.+++.++|.|.+++ +|+||++||..+..+.++...|+++|+++.+|+++++.
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~  172 (275)
T PRK05876         93 IVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAR  172 (275)
T ss_pred             cCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHHHHHHHHHHHHH
Confidence            87778888999999999999999999999999999997665 68999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++||+
T Consensus       173 e~~~~gi~  180 (275)
T PRK05876        173 EVTADGIG  180 (275)
T ss_pred             HhhhcCcE
Confidence            99988875

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.4e-33  Score=197.84  Aligned_cols=160  Identities=20%  Similarity=0.264  Sum_probs=140.6

Q ss_pred             CCC--CchHHHHHHHHHHCCCeEEEEecChhh---HHhhhcC-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQ--GGIGHALARAFAASDCRVVATGRSKAT---MADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~--~giG~~ia~~l~~~g~~vi~~~r~~~~---~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+  +|||+++|++|+++|++|++++|+.+.   ++++.++ ....++.+|++|+++++++++++.++++++|++||||
T Consensus        17 Gas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ld~lv~nA   96 (258)
T PRK07533         17 GIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGRLDFLLHSI   96 (258)
T ss_pred             CCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCCCCEEEEcC
Confidence            666  599999999999999999999998543   3333332 2356789999999999999999999999999999999


Q ss_pred             CCCCC----CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           75 GVQCV----GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        75 g~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      |....    .++.+.+.++|++++++|+.+++.+++.++|.|+  ++|+||++||..+..+.+.+..|+++|+|+.+|++
T Consensus        97 g~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~--~~g~Ii~iss~~~~~~~~~~~~Y~asKaal~~l~~  174 (258)
T PRK07533         97 AFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMT--NGGSLLTMSYYGAEKVVENYNLMGPVKAALESSVR  174 (258)
T ss_pred             ccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhc--cCCEEEEEeccccccCCccchhhHHHHHHHHHHHH
Confidence            97542    4677889999999999999999999999999995  35899999999988888889999999999999999


Q ss_pred             HHHHHhccCCCC
Q 042185          151 TLRLELGHFGID  162 (162)
Q Consensus       151 ~l~~e~~~~gi~  162 (162)
                      +|+.|++++|||
T Consensus       175 ~la~el~~~gI~  186 (258)
T PRK07533        175 YLAAELGPKGIR  186 (258)
T ss_pred             HHHHHhhhcCcE
Confidence            999999999986

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.4e-33  Score=199.48  Aligned_cols=160  Identities=21%  Similarity=0.283  Sum_probs=140.5

Q ss_pred             CCC--CchHHHHHHHHHHCCCeEEEEecCh---hhHHhhhcC-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQ--GGIGHALARAFAASDCRVVATGRSK---ATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~--~giG~~ia~~l~~~g~~vi~~~r~~---~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+  +|||+++|+.|+++|++|++++|+.   +.++++.++ .....+++|++|+++++.+++++.++++++|++||||
T Consensus        17 Gas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nA   96 (272)
T PRK08159         17 GVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGKLDFVVHAI   96 (272)
T ss_pred             CCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCCCcEEEECC
Confidence            554  8999999999999999999998874   334444333 3355789999999999999999999999999999999


Q ss_pred             CCCCC----CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           75 GVQCV----GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        75 g~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      |+...    .++.+.+.++|++.+++|+.+++.++++++|.|++  +|+||++||..+..+.|.+..|+++|+|+.+|++
T Consensus        97 G~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~p~~~~Y~asKaal~~l~~  174 (272)
T PRK08159         97 GFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGAEKVMPHYNVMGVAKAALEASVK  174 (272)
T ss_pred             cccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCcchhhhhHHHHHHHHHH
Confidence            98642    56778899999999999999999999999999853  5899999999888888999999999999999999


Q ss_pred             HHHHHhccCCCC
Q 042185          151 TLRLELGHFGID  162 (162)
Q Consensus       151 ~l~~e~~~~gi~  162 (162)
                      +++.|++++|||
T Consensus       175 ~la~el~~~gIr  186 (272)
T PRK08159        175 YLAVDLGPKNIR  186 (272)
T ss_pred             HHHHHhcccCeE
Confidence            999999999986

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=5.5e-33  Score=198.84  Aligned_cols=162  Identities=36%  Similarity=0.526  Sum_probs=144.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--------CCceeEEEeccCChHHHHHHHHHHHHH-cCCccEEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--------DPRFFVQELDVLSEQSVQNVLSNVLEK-FGKIDVLV   71 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--------~~~~~~~~~D~~~~~~i~~~~~~~~~~-~~~id~vi   71 (162)
                      ||++|||+++|++|++.|++|++++|+.+.+++...        ..++..+.||++++++++.+++...+. +|++|++|
T Consensus        15 G~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~GkidiLv   94 (270)
T KOG0725|consen   15 GGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFFGKIDILV   94 (270)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhCCCCCEEE
Confidence            899999999999999999999999999988766543        245889999999999999999999999 79999999


Q ss_pred             ECCCCCCCC-CCCCCChHHHHHHHHhhhhh-HHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCc-hhhhHhHHHHHHH
Q 042185           72 NNAGVQCVG-PLAEVPLSAMEQTFNTNVFG-PMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWA-GTYTASKAALHSL  148 (162)
Q Consensus        72 ~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~-~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-~~y~~sKaa~~~l  148 (162)
                      ||||..... ++.+.+.+.|++++++|+.| .+.+.+.+.+.+.+++++.|+++||..+..+.+.. ..|+++|+|+++|
T Consensus        95 nnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~~Y~~sK~al~~l  174 (270)
T KOG0725|consen   95 NNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGVAYGVSKAALLQL  174 (270)
T ss_pred             EcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCcccchhHHHHHHHH
Confidence            999987654 79999999999999999995 55566666777777788999999999998876665 7999999999999


Q ss_pred             HHHHHHHhccCCCC
Q 042185          149 TDTLRLELGHFGID  162 (162)
Q Consensus       149 ~~~l~~e~~~~gi~  162 (162)
                      +|+++.||+++|||
T Consensus       175 tr~lA~El~~~gIR  188 (270)
T KOG0725|consen  175 TRSLAKELAKHGIR  188 (270)
T ss_pred             HHHHHHHHhhcCcE
Confidence            99999999999997

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.8e-33  Score=198.18  Aligned_cols=160  Identities=21%  Similarity=0.285  Sum_probs=139.4

Q ss_pred             CCCC--chHHHHHHHHHHCCCeEEEEecChh---hHHhhhcC-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQG--GIGHALARAFAASDCRVVATGRSKA---TMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~--giG~~ia~~l~~~g~~vi~~~r~~~---~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++  |||+++|+.|+++|++|++.+|+.+   .++++..+ ....++.+|++|+++++++++++.+++|++|++|||+
T Consensus        15 Gas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnna   94 (260)
T PRK06603         15 GIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGSFDFLLHGM   94 (260)
T ss_pred             CCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCCccEEEEcc
Confidence            6776  9999999999999999999998742   23333332 2234678999999999999999999999999999999


Q ss_pred             CCCC----CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           75 GVQC----VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        75 g~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      |...    ..++.+.+.++|++.+++|+.+++.++++++|.|++  +|+||++||..+..+.+....|+++|+|+.+|++
T Consensus        95 g~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~  172 (260)
T PRK06603         95 AFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKVIPNYNVMGVAKAALEASVK  172 (260)
T ss_pred             ccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccCCCcccchhhHHHHHHHHHH
Confidence            9753    246778899999999999999999999999999953  5899999999988888899999999999999999


Q ss_pred             HHHHHhccCCCC
Q 042185          151 TLRLELGHFGID  162 (162)
Q Consensus       151 ~l~~e~~~~gi~  162 (162)
                      +++.|++++|||
T Consensus       173 ~la~el~~~gIr  184 (260)
T PRK06603        173 YLANDMGENNIR  184 (260)
T ss_pred             HHHHHhhhcCeE
Confidence            999999999986

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=4.7e-33  Score=199.14  Aligned_cols=160  Identities=19%  Similarity=0.268  Sum_probs=140.1

Q ss_pred             CCC--CchHHHHHHHHHHCCCeEEEEecC------hhhHHhhhcC-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEE
Q 042185            1 CSQ--GGIGHALARAFAASDCRVVATGRS------KATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLV   71 (162)
Q Consensus         1 Ga~--~giG~~ia~~l~~~g~~vi~~~r~------~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi   71 (162)
                      ||+  +|||+++|++|+++|++|++.+|+      .+.++++.++ ....++.+|++|+++++.+++++.+++|++|++|
T Consensus        13 Gas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv   92 (258)
T PRK07370         13 GIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQKWGKLDILV   92 (258)
T ss_pred             CCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            554  899999999999999999988653      2334444332 3466889999999999999999999999999999


Q ss_pred             ECCCCCC----CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHH
Q 042185           72 NNAGVQC----VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHS  147 (162)
Q Consensus        72 ~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~  147 (162)
                      ||+|+..    ..++.+.+.++|++.+++|+.+++.++++++|.|++  +|+||++||..+..+.+....|+++|+|+.+
T Consensus        93 ~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~  170 (258)
T PRK07370         93 HCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPNYNVMGVAKAALEA  170 (258)
T ss_pred             EcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccCCcccchhhHHHHHHHH
Confidence            9999753    257888899999999999999999999999999964  4899999999999999999999999999999


Q ss_pred             HHHHHHHHhccCCCC
Q 042185          148 LTDTLRLELGHFGID  162 (162)
Q Consensus       148 l~~~l~~e~~~~gi~  162 (162)
                      |+++|+.|++++|||
T Consensus       171 l~~~la~el~~~gI~  185 (258)
T PRK07370        171 SVRYLAAELGPKNIR  185 (258)
T ss_pred             HHHHHHHHhCcCCeE
Confidence            999999999999986

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=7.8e-33  Score=199.36  Aligned_cols=160  Identities=29%  Similarity=0.468  Sum_probs=144.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||+++|+.|+++|++|++++|+ +.+++...     ..++.++.+|++++++++.+++++.+.++++|++|||||
T Consensus        13 Gas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag   91 (272)
T PRK08589         13 GASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVDVLFNNAG   91 (272)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcCEEEECCC
Confidence            899999999999999999999999999 54443322     246889999999999999999999999999999999999


Q ss_pred             CCC-CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           76 VQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        76 ~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      ... ..++.+.+.+.|++++++|+.+++.++++++|.|++++ |+||++||..+..+.+....|+++|+|+++|+++++.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~  170 (272)
T PRK08589         92 VDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAI  170 (272)
T ss_pred             CCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHHHHHHHHHHHHHHH
Confidence            864 35777889999999999999999999999999997654 8999999999999888999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       171 e~~~~gI~  178 (272)
T PRK08589        171 EYGRDGIR  178 (272)
T ss_pred             HhhhcCeE
Confidence            99999885

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=5.7e-33  Score=185.49  Aligned_cols=161  Identities=32%  Similarity=0.469  Sum_probs=148.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      ||++|||++++++|.+.|-+||+++|+++++++++.+ ..+....||+.|.++++.+++++.++++.++++|||||+-..
T Consensus        12 GG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvliNNAGIqr~   91 (245)
T COG3967          12 GGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRN   91 (245)
T ss_pred             CCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheeeecccccch
Confidence            8999999999999999999999999999999998764 778899999999999999999999999999999999998644


Q ss_pred             CCCC--CCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhc
Q 042185           80 GPLA--EVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus        80 ~~~~--~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                      -.+.  +...+..+.-+.+|+.+++.++..++|++.+++.+.||++||..++.|+...+.|+++|||+..++.+|+..++
T Consensus        92 ~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKAaiHsyt~aLR~Qlk  171 (245)
T COG3967          92 EDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTLALREQLK  171 (245)
T ss_pred             hhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHHHHHHHHHHHHHHhh
Confidence            3332  45567788999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             cCCC
Q 042185          158 HFGI  161 (162)
Q Consensus       158 ~~gi  161 (162)
                      ..+|
T Consensus       172 ~t~v  175 (245)
T COG3967         172 DTSV  175 (245)
T ss_pred             hcce
Confidence            8766

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.2e-32  Score=196.88  Aligned_cols=160  Identities=16%  Similarity=0.194  Sum_probs=141.6

Q ss_pred             CCC--CchHHHHHHHHHHCCCeEEEEecCh---hhHHhhhc---CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            1 CSQ--GGIGHALARAFAASDCRVVATGRSK---ATMADLEQ---DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         1 Ga~--~giG~~ia~~l~~~g~~vi~~~r~~---~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      ||+  +|||+++|++|+++|++|++++|+.   +.++++.+   ..++.++.+|++|+++++.+++++.+++|++|++||
T Consensus        14 Ga~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ld~lv~   93 (257)
T PRK08594         14 GVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEVGVIHGVAH   93 (257)
T ss_pred             CCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCccEEEE
Confidence            565  8999999999999999999998753   34444433   246778999999999999999999999999999999


Q ss_pred             CCCCCC----CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHH
Q 042185           73 NAGVQC----VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSL  148 (162)
Q Consensus        73 ~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l  148 (162)
                      |+|+..    ..++.+.+.++|+..+++|+.+++.+++.++|.|++  +|+||++||..+..+.+....|+++|+|+.+|
T Consensus        94 nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l  171 (257)
T PRK08594         94 CIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGERVVQNYNVMGVAKASLEAS  171 (257)
T ss_pred             CcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCccCCCCCchhHHHHHHHHHH
Confidence            999753    256778899999999999999999999999999954  58999999999999989999999999999999


Q ss_pred             HHHHHHHhccCCCC
Q 042185          149 TDTLRLELGHFGID  162 (162)
Q Consensus       149 ~~~l~~e~~~~gi~  162 (162)
                      +++++.|++++|||
T Consensus       172 ~~~la~el~~~gIr  185 (257)
T PRK08594        172 VKYLANDLGKDGIR  185 (257)
T ss_pred             HHHHHHHhhhcCCE
Confidence            99999999999986

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=3e-33  Score=198.26  Aligned_cols=160  Identities=39%  Similarity=0.596  Sum_probs=146.0

Q ss_pred             CCC--CchHHHHHHHHHHCCCeEEEEecChhhH----HhhhcCCceeEEEeccCChHHHHHHHHHHHHHc-CCccEEEEC
Q 042185            1 CSQ--GGIGHALARAFAASDCRVVATGRSKATM----ADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF-GKIDVLVNN   73 (162)
Q Consensus         1 Ga~--~giG~~ia~~l~~~g~~vi~~~r~~~~~----~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~id~vi~~   73 (162)
                      |++  +|||+++|++|+++|++|++++|+.+++    +++..+....++.+|++++++++.+++++.+.+ |++|++|||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~   80 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN   80 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence            666  9999999999999999999999998873    444444445579999999999999999999999 999999999


Q ss_pred             CCCCCC----CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHH
Q 042185           74 AGVQCV----GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLT  149 (162)
Q Consensus        74 ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~  149 (162)
                      +|....    .++.+.+.++|+..+++|+.+++.+++++.|+|++.  |+||++||..+..+.++...|+++|+|+++|+
T Consensus        81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~~~~~~~y~~sKaal~~l~  158 (241)
T PF13561_consen   81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQRPMPGYSAYSASKAALEGLT  158 (241)
T ss_dssp             EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHH
T ss_pred             ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhcccCccchhhHHHHHHHHHHH
Confidence            998765    678889999999999999999999999999988654  89999999999999999999999999999999


Q ss_pred             HHHHHHhcc-CCCC
Q 042185          150 DTLRLELGH-FGID  162 (162)
Q Consensus       150 ~~l~~e~~~-~gi~  162 (162)
                      |+++.||++ +|||
T Consensus       159 r~lA~el~~~~gIr  172 (241)
T PF13561_consen  159 RSLAKELAPKKGIR  172 (241)
T ss_dssp             HHHHHHHGGHGTEE
T ss_pred             HHHHHHhccccCee
Confidence            999999999 9987

...

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=1.6e-32  Score=196.38  Aligned_cols=155  Identities=28%  Similarity=0.403  Sum_probs=143.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||++|||+++|++|+++|++|++++|+.+..      ..+.++.+|++++++++++++++.++++++|++|||||.....
T Consensus        13 Gas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~~~~~   86 (258)
T PRK06398         13 GGSQGIGKAVVNRLKEEGSNVINFDIKEPSY------NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYG   86 (258)
T ss_pred             CCCchHHHHHHHHHHHCCCeEEEEeCCcccc------CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence            8999999999999999999999999986532      2578899999999999999999999999999999999987777


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccCC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG  160 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~g  160 (162)
                      ++.+.+.++|++++++|+.+++.++++++|.|++++.++||++||..+..+.+....|+++|+++++|+++++.|+++. 
T Consensus        87 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~~~~~la~e~~~~-  165 (258)
T PRK06398         87 AIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAPT-  165 (258)
T ss_pred             CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHHHHHHHHHHHHHhCCC-
Confidence            8889999999999999999999999999999988778999999999999999999999999999999999999999864 


Q ss_pred             CC
Q 042185          161 ID  162 (162)
Q Consensus       161 i~  162 (162)
                      ||
T Consensus       166 i~  167 (258)
T PRK06398        166 IR  167 (258)
T ss_pred             CE
Confidence            54

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-32  Score=191.57  Aligned_cols=159  Identities=21%  Similarity=0.255  Sum_probs=141.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcC-CccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFG-KIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~-~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++.+     ......+.+|++++++++++++++.++++ ++|++|||+
T Consensus        12 Gas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD~li~na   91 (227)
T PRK08862         12 SAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRAPDVLVNNW   91 (227)
T ss_pred             CCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCCCCEEEECC
Confidence            899999999999999999999999999887765533     24577889999999999999999999999 999999999


Q ss_pred             CCC-CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHH
Q 042185           75 GVQ-CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTL  152 (162)
Q Consensus        75 g~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l  152 (162)
                      |.. ...++.+.+.++|.+.+++|+.+++.+++.++|+|++++ +|+||++||..+.   ++...|+++|+++.+|++++
T Consensus        92 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~~~~~Y~asKaal~~~~~~l  168 (227)
T PRK08862         92 TSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---QDLTGVESSNALVSGFTHSW  168 (227)
T ss_pred             ccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---CCcchhHHHHHHHHHHHHHH
Confidence            854 445788899999999999999999999999999998654 6899999996543   56788999999999999999


Q ss_pred             HHHhccCCCC
Q 042185          153 RLELGHFGID  162 (162)
Q Consensus       153 ~~e~~~~gi~  162 (162)
                      +.|++++|||
T Consensus       169 a~el~~~~Ir  178 (227)
T PRK08862        169 AKELTPFNIR  178 (227)
T ss_pred             HHHHhhcCcE
Confidence            9999999986

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-32  Score=195.72  Aligned_cols=162  Identities=31%  Similarity=0.424  Sum_probs=147.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||++++++|+++|++|++++|+.+.++++.+     ..++.++.+|++++++++++++++.++++++|++|||||
T Consensus        13 Gas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag   92 (254)
T PRK07478         13 GASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLDIAFNNAG   92 (254)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            899999999999999999999999999877665533     246788999999999999999999999999999999999


Q ss_pred             CCC-CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccccc-CCCCCchhhhHhHHHHHHHHHHHH
Q 042185           76 VQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVA-APGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        76 ~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      ... ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+. .+.+....|++||++++.|+++++
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la  172 (254)
T PRK07478         93 TLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLA  172 (254)
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHHHHHHHHHHHHHH
Confidence            753 467778899999999999999999999999999988888999999998887 577888999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       173 ~e~~~~gi~  181 (254)
T PRK07478        173 AEYGAQGIR  181 (254)
T ss_pred             HHHhhcCEE
Confidence            999998885

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.2e-32  Score=195.97  Aligned_cols=160  Identities=13%  Similarity=0.175  Sum_probs=137.9

Q ss_pred             CCCC--chHHHHHHHHHHCCCeEEEEecCh---hhHHhhhcC-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQG--GIGHALARAFAASDCRVVATGRSK---ATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~--giG~~ia~~l~~~g~~vi~~~r~~---~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++  |||+++|+.|+++|++|++++|+.   +..+++..+ ....++.+|++|+++++++++++.+++|++|++||||
T Consensus        13 Gas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~linnA   92 (262)
T PRK07984         13 GVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPKFDGFVHSI   92 (262)
T ss_pred             CCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCCCCEEEECC
Confidence            6664  999999999999999999999873   223333322 3456789999999999999999999999999999999


Q ss_pred             CCCCCCC-----CCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHH
Q 042185           75 GVQCVGP-----LAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLT  149 (162)
Q Consensus        75 g~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~  149 (162)
                      |+....+     +.+.+.++|+..+++|+.+++.+.+.+.|.++  ++|+||++||..+..+.+.+..|+++|+|+.+|+
T Consensus        93 g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~  170 (262)
T PRK07984         93 GFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN--PGSALLTLSYLGAERAIPNYNVMGLAKASLEANV  170 (262)
T ss_pred             ccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc--CCcEEEEEecCCCCCCCCCcchhHHHHHHHHHHH
Confidence            9754322     55678999999999999999999999998663  3589999999998888899999999999999999


Q ss_pred             HHHHHHhccCCCC
Q 042185          150 DTLRLELGHFGID  162 (162)
Q Consensus       150 ~~l~~e~~~~gi~  162 (162)
                      ++++.|++++|||
T Consensus       171 ~~la~el~~~gIr  183 (262)
T PRK07984        171 RYMANAMGPEGVR  183 (262)
T ss_pred             HHHHHHhcccCcE
Confidence            9999999999986

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.2e-32  Score=197.24  Aligned_cols=159  Identities=18%  Similarity=0.249  Sum_probs=137.1

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecC---hhhHHhhhcC-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRS---KATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~---~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      +++|||+++|++|+++|++|++++|.   .+.++++..+ ....++.+|++|+++++.+++.+.++++++|++|||||..
T Consensus        16 ~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~   95 (260)
T PRK06997         16 SNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDGLDGLVHSIGFA   95 (260)
T ss_pred             CCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCCCcEEEEccccC
Confidence            36899999999999999999998653   4444444332 2335789999999999999999999999999999999985


Q ss_pred             CCC----C-CCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHH
Q 042185           78 CVG----P-LAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTL  152 (162)
Q Consensus        78 ~~~----~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l  152 (162)
                      ...    + +++.+.++|+..+++|+.+++.++++++|+|+  +.|+||++||..+..+.+....|+++|+|+.+|++++
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~--~~g~Ii~iss~~~~~~~~~~~~Y~asKaal~~l~~~l  173 (260)
T PRK06997         96 PREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS--DDASLLTLSYLGAERVVPNYNTMGLAKASLEASVRYL  173 (260)
T ss_pred             CccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC--CCceEEEEeccccccCCCCcchHHHHHHHHHHHHHHH
Confidence            432    2 45678899999999999999999999999994  3589999999999888889999999999999999999


Q ss_pred             HHHhccCCCC
Q 042185          153 RLELGHFGID  162 (162)
Q Consensus       153 ~~e~~~~gi~  162 (162)
                      +.|++++|||
T Consensus       174 a~el~~~gIr  183 (260)
T PRK06997        174 AVSLGPKGIR  183 (260)
T ss_pred             HHHhcccCeE
Confidence            9999999986

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.5e-32  Score=196.85  Aligned_cols=160  Identities=19%  Similarity=0.224  Sum_probs=138.3

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecCh---hhHHhhhcC-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSK---ATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~---~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      +++|||+++|+.|+++|++|++.+|+.   +.++++..+ .....++||++|+++++.+++++.++++++|++|||||+.
T Consensus        16 ~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~   95 (261)
T PRK08690         16 SERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFA   95 (261)
T ss_pred             CCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCCCcEEEECCccC
Confidence            377999999999999999999987753   233344332 3456789999999999999999999999999999999986


Q ss_pred             CCC----C-CCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHH
Q 042185           78 CVG----P-LAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTL  152 (162)
Q Consensus        78 ~~~----~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l  152 (162)
                      ...    + +.+.+.++|+..+++|+.+++.+++.++|.|+++ +|+||++||..+..+.|.+..|+++|+|+.+|++++
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~~l  174 (261)
T PRK08690         96 PKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAIPNYNVMGMAKASLEAGIRFT  174 (261)
T ss_pred             CccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccCCCCcccchhHHHHHHHHHHHH
Confidence            432    2 3567889999999999999999999999998644 589999999999888899999999999999999999


Q ss_pred             HHHhccCCCC
Q 042185          153 RLELGHFGID  162 (162)
Q Consensus       153 ~~e~~~~gi~  162 (162)
                      +.|++++|||
T Consensus       175 a~e~~~~gIr  184 (261)
T PRK08690        175 AACLGKEGIR  184 (261)
T ss_pred             HHHhhhcCeE
Confidence            9999999986

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=100.00  E-value=3.1e-32  Score=182.93  Aligned_cols=152  Identities=36%  Similarity=0.614  Sum_probs=140.0

Q ss_pred             CCCCchHHHHHHHHHHCCC-eEEEEecC--hhhHHhh----h-cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            1 CSQGGIGHALARAFAASDC-RVVATGRS--KATMADL----E-QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-~vi~~~r~--~~~~~~~----~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      ||++|||++++++|+++|. +|++++|+  .+..+++    . ...++.++++|++++++++.+++++.+.++++|++||
T Consensus         7 Ga~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ld~li~   86 (167)
T PF00106_consen    7 GASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGPLDILIN   86 (167)
T ss_dssp             TTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSSESEEEE
T ss_pred             CCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            8999999999999999976 78999998  4444443    2 2478899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHH
Q 042185           73 NAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTL  152 (162)
Q Consensus        73 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l  152 (162)
                      |+|....+++.+++.++|++++++|+.+++.+.+.+.|    ++++.||++||..+..|.|....|+++|+++++|++++
T Consensus        87 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~~~~~Y~askaal~~~~~~l  162 (167)
T PF00106_consen   87 NAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGVRGSPGMSAYSASKAALRGLTQSL  162 (167)
T ss_dssp             ECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGTSSSTTBHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccchhhhhccccccceeeeeeehhee----ccccceEEecchhhccCCCCChhHHHHHHHHHHHHHHH
Confidence            99998888999999999999999999999999999999    55799999999999999999999999999999999999


Q ss_pred             HHHh
Q 042185          153 RLEL  156 (162)
Q Consensus       153 ~~e~  156 (162)
                      ++|+
T Consensus       163 a~e~  166 (167)
T PF00106_consen  163 AAEL  166 (167)
T ss_dssp             HHHH
T ss_pred             HHhc
Confidence            9997

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.1e-32  Score=194.45  Aligned_cols=161  Identities=29%  Similarity=0.432  Sum_probs=143.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh-hHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA-TMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~-~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      ||++|||+++|++|+++|++|++++++.+ ..+++... .+.++.+|++|+++++.+++++.+.++++|++|||+|....
T Consensus        14 Gas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~   92 (255)
T PRK06463         14 GGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREK-GVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYL   92 (255)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhC-CCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC
Confidence            89999999999999999999988876543 33444332 57889999999999999999999999999999999998766


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC-CCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA-PGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      .++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+.. +.++...|+++|+|+++|+++++.|+++
T Consensus        93 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~  172 (255)
T PRK06463         93 MPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELGK  172 (255)
T ss_pred             CChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHHHHHHHHHHHHHHHhhh
Confidence            788888999999999999999999999999999877789999999988875 4567788999999999999999999999


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +|||
T Consensus       173 ~~i~  176 (255)
T PRK06463        173 YGIR  176 (255)
T ss_pred             cCeE
Confidence            9885

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-32  Score=196.46  Aligned_cols=161  Identities=34%  Similarity=0.504  Sum_probs=149.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHc-CCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF-GKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~id~vi~~ag~~~~   79 (162)
                      ||+||||++++++|+++|++|++++|+.+.++++... .+.++.+|++|.++++.+++++.+.+ +++|++|||+|....
T Consensus        11 GasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~-~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~   89 (277)
T PRK05993         11 GCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAE-GLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNNGAYGQP   89 (277)
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC-CceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEECCCcCCC
Confidence            8999999999999999999999999998887766543 57788999999999999999997766 689999999998877


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccC
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHF  159 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~  159 (162)
                      +++.+.+.++++..+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|+++++|+++++.|++++
T Consensus        90 ~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~el~~~  169 (277)
T PRK05993         90 GAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQGS  169 (277)
T ss_pred             CCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHHHHHHHHHHHhhhh
Confidence            88888999999999999999999999999999988888999999999999999999999999999999999999999999


Q ss_pred             CCC
Q 042185          160 GID  162 (162)
Q Consensus       160 gi~  162 (162)
                      ||+
T Consensus       170 gi~  172 (277)
T PRK05993        170 GIH  172 (277)
T ss_pred             CCE
Confidence            885

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-32  Score=195.68  Aligned_cols=162  Identities=36%  Similarity=0.466  Sum_probs=151.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCC-ceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDP-RFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      ||+||||++++++|+++|++|++++|+.+.+++...+. .+.++.+|++++++++.+++++.+.++++|++|||+|....
T Consensus        12 GasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~   91 (273)
T PRK07825         12 GGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPV   91 (273)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC
Confidence            89999999999999999999999999988877664433 47889999999999999999999999999999999999877


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccC
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHF  159 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~  159 (162)
                      .++.+.+.+.+++++++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|+++.+|+++++.|+.+.
T Consensus        92 ~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~l~~el~~~  171 (273)
T PRK07825         92 GPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGT  171 (273)
T ss_pred             CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHHHHHHHHHHHHHhhcc
Confidence            88888999999999999999999999999999998888999999999999999999999999999999999999999998


Q ss_pred             CCC
Q 042185          160 GID  162 (162)
Q Consensus       160 gi~  162 (162)
                      ||+
T Consensus       172 gi~  174 (273)
T PRK07825        172 GVH  174 (273)
T ss_pred             CcE
Confidence            875

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-32  Score=197.94  Aligned_cols=161  Identities=32%  Similarity=0.524  Sum_probs=147.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||++|||++++++|+++|++|++++|+.+.++++.+    ...+..+.+|++|.++++.+++++.+.++++|++|||+|.
T Consensus        16 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~vI~nAG~   95 (296)
T PRK05872         16 GAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGI   95 (296)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence            899999999999999999999999999887766543    2356667799999999999999999999999999999999


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHh
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                      ....++.+.+.++|++++++|+.+++.+++.++|.|.++ .|+||++||..+..+.+....|+++|+++++|+++++.|+
T Consensus        96 ~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaal~~~~~~l~~e~  174 (296)
T PRK05872         96 ASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEV  174 (296)
T ss_pred             CCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence            877888899999999999999999999999999998764 5899999999999999999999999999999999999999


Q ss_pred             ccCCCC
Q 042185          157 GHFGID  162 (162)
Q Consensus       157 ~~~gi~  162 (162)
                      +++||+
T Consensus       175 ~~~gi~  180 (296)
T PRK05872        175 AHHGVT  180 (296)
T ss_pred             HHHCcE
Confidence            998875

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=2.1e-32  Score=194.55  Aligned_cols=161  Identities=15%  Similarity=0.147  Sum_probs=144.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC------CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+ +|++|++++|+.+.++++.++      ..+.++.+|++|+++++.+++++.+.+|++|++|||+
T Consensus         7 Gas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~na   85 (246)
T PRK05599          7 GGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISLAVVAF   85 (246)
T ss_pred             eCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCEEEEec
Confidence            899999999999999 599999999998877655331      2477899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      |.....+..+.+.+++++.+++|+.+++.+++.++|.|.+++ +|+||++||..+..+.+....|+++|+|+.+|+++++
T Consensus        86 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la  165 (246)
T PRK05599         86 GILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLDAFCQGLA  165 (246)
T ss_pred             CcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHHHHHHHHH
Confidence            986555566677888899999999999999999999997664 6899999999999999999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       166 ~el~~~~I~  174 (246)
T PRK05599        166 DSLHGSHVR  174 (246)
T ss_pred             HHhcCCCce
Confidence            999999986

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-32  Score=194.39  Aligned_cols=162  Identities=31%  Similarity=0.418  Sum_probs=144.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||.+++++|+++|++|++++|+.+.+++..+     ..++.++.+|++++++++.+++++.+.++++|++|||+|
T Consensus        16 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag   95 (253)
T PRK05867         16 GASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAG   95 (253)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence            899999999999999999999999999877665533     246778899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCC-C-CchhhhHhHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPG-P-WAGTYTASKAALHSLTDTL  152 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~-~-~~~~y~~sKaa~~~l~~~l  152 (162)
                      .....++.+.+.++|+..+++|+.+++.+++++.|.|.+++ +++||++||..+..+. + ....|+++|+++++|++++
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~asKaal~~~~~~l  175 (253)
T PRK05867         96 IITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAM  175 (253)
T ss_pred             CCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHHHHHHHHHHHHH
Confidence            87777888899999999999999999999999999997654 5799999998776432 3 4578999999999999999


Q ss_pred             HHHhccCCCC
Q 042185          153 RLELGHFGID  162 (162)
Q Consensus       153 ~~e~~~~gi~  162 (162)
                      +.|++++|||
T Consensus       176 a~e~~~~gI~  185 (253)
T PRK05867        176 AVELAPHKIR  185 (253)
T ss_pred             HHHHhHhCeE
Confidence            9999999986

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-32  Score=193.88  Aligned_cols=162  Identities=24%  Similarity=0.303  Sum_probs=145.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||++|||+++|++|+++|++|++++|+.+.+++..+    ...+.++.+|++|.++++++++++.++++++|++|||+|.
T Consensus         7 Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li~naG~   86 (259)
T PRK08340          7 ASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALVWNAGN   86 (259)
T ss_pred             cCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence            899999999999999999999999999876655432    2467889999999999999999999999999999999997


Q ss_pred             CC--CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhh-cCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           77 QC--VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY-RKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        77 ~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      ..  ..++.+.+.++|.+.+++|+.+++.+++.++|.|.+ +++|+||++||..+..+.+....|+++|+++.+|+++++
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~~~~~la  166 (259)
T PRK08340         87 VRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQLAKGVS  166 (259)
T ss_pred             CCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHHHHHHHHH
Confidence            53  345778889999999999999999999999998864 457899999999999988999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       167 ~e~~~~gI~  175 (259)
T PRK08340        167 RTYGGKGIR  175 (259)
T ss_pred             HHhCCCCEE
Confidence            999999985

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-32  Score=193.40  Aligned_cols=160  Identities=28%  Similarity=0.362  Sum_probs=145.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC--CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||++++++|+++|++|++++|+.+.++++..+  .++.++.+|++++++++++++++.+.++++|++|||+|...
T Consensus        13 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~   92 (261)
T PRK08265         13 GGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDILVNLACTYL   92 (261)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence            8999999999999999999999999998766655433  46788999999999999999999999999999999999764


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ..++ +.+.++|++.+++|+.+++.++++++|.|+ ++.++||++||..+..+.+....|+++|+++.+|+++++.|+++
T Consensus        93 ~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~  170 (261)
T PRK08265         93 DDGL-ASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAP  170 (261)
T ss_pred             CCcC-cCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCCCCCchhHHHHHHHHHHHHHHHHHhcc
Confidence            4433 568899999999999999999999999997 66789999999999999999999999999999999999999999


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +|||
T Consensus       171 ~gi~  174 (261)
T PRK08265        171 DGIR  174 (261)
T ss_pred             cCEE
Confidence            9885

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.3e-33  Score=187.21  Aligned_cols=161  Identities=42%  Similarity=0.628  Sum_probs=151.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHH-HcCCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLE-KFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~-~~~~id~vi~~ag~~~~   79 (162)
                      +++||||.+++++|+++|+.|+.+.|..+...++..+..+....+|+++++++..+..++.+ ..|++|+++||||..-.
T Consensus        15 cs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~NNAG~~C~   94 (289)
T KOG1209|consen   15 CSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLLYNNAGQSCT   94 (289)
T ss_pred             cCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEEEcCCCCCcc
Confidence            57899999999999999999999999999998888788899999999999999999999988 77999999999999878


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccC
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHF  159 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~  159 (162)
                      .|..+.+.+..++.+++|++|.+.+++++.. +..+.+|.||++.|..++.|.|....|.+||+|+.++++.|+.|++++
T Consensus        95 ~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h-~likaKGtIVnvgSl~~~vpfpf~~iYsAsKAAihay~~tLrlEl~PF  173 (289)
T KOG1209|consen   95 FPALDATIAAVEQCFKVNVFGHIRMCRALSH-FLIKAKGTIVNVGSLAGVVPFPFGSIYSASKAAIHAYARTLRLELKPF  173 (289)
T ss_pred             cccccCCHHHHHhhhccceeeeehHHHHHHH-HHHHccceEEEecceeEEeccchhhhhhHHHHHHHHhhhhcEEeeecc
Confidence            8899999999999999999999999999985 445667999999999999999999999999999999999999999999


Q ss_pred             CCC
Q 042185          160 GID  162 (162)
Q Consensus       160 gi~  162 (162)
                      |||
T Consensus       174 gv~  176 (289)
T KOG1209|consen  174 GVR  176 (289)
T ss_pred             ccE
Confidence            986

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-32  Score=197.96  Aligned_cols=162  Identities=21%  Similarity=0.281  Sum_probs=138.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh----------hhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK----------ATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFG   65 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~----------~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   65 (162)
                      ||++|||+++|+.|+++|++|++++|+.          +.++++.+     ...+.++.+|++++++++.+++++.+++|
T Consensus        15 Ggs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   94 (305)
T PRK08303         15 GATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVERIDREQG   94 (305)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            8999999999999999999999999973          22332221     24577899999999999999999999999


Q ss_pred             CccEEEECC-CCCC----CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC---CCCCchh
Q 042185           66 KIDVLVNNA-GVQC----VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA---PGPWAGT  137 (162)
Q Consensus        66 ~id~vi~~a-g~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~---~~~~~~~  137 (162)
                      ++|++|||+ |...    ..++.+.+.++|++++++|+.+++.++++++|.|+++++|+||++||..+..   +.+....
T Consensus        95 ~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~~~~~~~~~  174 (305)
T PRK08303         95 RLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNATHYRLSVF  174 (305)
T ss_pred             CccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccCcCCCCcch
Confidence            999999999 7531    2567778899999999999999999999999999877779999999976543   2345678


Q ss_pred             hhHhHHHHHHHHHHHHHHhccCCCC
Q 042185          138 YTASKAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       138 y~~sKaa~~~l~~~l~~e~~~~gi~  162 (162)
                      |+++|+|+.+|+++|+.|+++.|||
T Consensus       175 Y~asKaal~~lt~~La~el~~~gIr  199 (305)
T PRK08303        175 YDLAKTSVNRLAFSLAHELAPHGAT  199 (305)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCcE
Confidence            9999999999999999999999986

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-32  Score=192.57  Aligned_cols=162  Identities=28%  Similarity=0.358  Sum_probs=148.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||++++++|+++|++|++++|+.+.+++...     ...+.++.+|++++++++.+++++.++++++|++|||+|
T Consensus        16 Gas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag   95 (254)
T PRK08085         16 GSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVLINNAG   95 (254)
T ss_pred             CCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            899999999999999999999999999876655432     245778899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....++.+.+.++|++.+++|+.+++.+++.+.+.+.+++.++||++||..+..+.+....|+++|+++++++++++.|
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e  175 (254)
T PRK08085         96 IQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVE  175 (254)
T ss_pred             cCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHHHHHHHHHHHHHHH
Confidence            87777888899999999999999999999999999998777799999999988888888999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      ++++|||
T Consensus       176 ~~~~gi~  182 (254)
T PRK08085        176 LARHNIQ  182 (254)
T ss_pred             HHhhCeE
Confidence            9999885

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.5e-31  Score=192.78  Aligned_cols=161  Identities=39%  Similarity=0.611  Sum_probs=149.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+||||++++++|+++|++|++++|+.+.++++.. ..+.++.+|++|.++++.+++++.+.++++|++|||+|....+
T Consensus        10 GasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~   88 (273)
T PRK06182         10 GASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS-LGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYG   88 (273)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCC
Confidence            899999999999999999999999999887766643 3478899999999999999999999999999999999998778


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccCC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG  160 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~g  160 (162)
                      ++.+.+.++|+..+++|+.+++.+++.++|.|++++.++||++||..+..+.+....|+++|+++++|+++++.|+++.|
T Consensus        89 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~g  168 (273)
T PRK06182         89 AIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALRLEVAPFG  168 (273)
T ss_pred             chhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHHHHHHHHHHHhcccC
Confidence            88899999999999999999999999999999888788999999998888888888999999999999999999999998


Q ss_pred             CC
Q 042185          161 ID  162 (162)
Q Consensus       161 i~  162 (162)
                      |+
T Consensus       169 i~  170 (273)
T PRK06182        169 ID  170 (273)
T ss_pred             CE
Confidence            85

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-31  Score=191.58  Aligned_cols=162  Identities=23%  Similarity=0.299  Sum_probs=144.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh-hHHhh----hc-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA-TMADL----EQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~-~~~~~----~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|++++|+.+ .+++.    .. ..++.++.+|++|+++++.+++++.++++++|++|||+
T Consensus        15 G~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~a   94 (254)
T PRK06114         15 GAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGALTLAVNAA   94 (254)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            89999999999999999999999998753 22322    11 34678899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCC--chhhhHhHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPW--AGTYTASKAALHSLTDTL  152 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--~~~y~~sKaa~~~l~~~l  152 (162)
                      |.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.+.  ...|+++|+|+++|++++
T Consensus        95 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l~~~l  174 (254)
T PRK06114         95 GIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSL  174 (254)
T ss_pred             CCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHHHHHHHHHHHHHHH
Confidence            987777888899999999999999999999999999998877899999999988776553  688999999999999999


Q ss_pred             HHHhccCCCC
Q 042185          153 RLELGHFGID  162 (162)
Q Consensus       153 ~~e~~~~gi~  162 (162)
                      +.|++++|||
T Consensus       175 a~e~~~~gi~  184 (254)
T PRK06114        175 AMEWVGRGIR  184 (254)
T ss_pred             HHHHhhcCeE
Confidence            9999999986

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=4.6e-32  Score=197.10  Aligned_cols=159  Identities=27%  Similarity=0.323  Sum_probs=134.9

Q ss_pred             CC--CCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC--------------C----ceeEEEecc--CCh--------
Q 042185            1 CS--QGGIGHALARAFAASDCRVVATGRSKATMADLEQD--------------P----RFFVQELDV--LSE--------   50 (162)
Q Consensus         1 Ga--~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~--------------~----~~~~~~~D~--~~~--------   50 (162)
                      ||  ++|||+++|+.|+++|++|++ +|+.+.+++...+              .    ....+.+|+  ++.        
T Consensus        16 Ga~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   94 (303)
T PLN02730         16 GVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPEDVPEDVK   94 (303)
T ss_pred             CCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCccccCchhhh
Confidence            67  799999999999999999998 6765555443211              1    135788898  433        


Q ss_pred             ----------HHHHHHHHHHHHHcCCccEEEECCCCCC--CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCC
Q 042185           51 ----------QSVQNVLSNVLEKFGKIDVLVNNAGVQC--VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG  118 (162)
Q Consensus        51 ----------~~i~~~~~~~~~~~~~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~  118 (162)
                                ++++.+++++.+++|++|++|||||...  ..++.+.+.++|++++++|+.+++.+++.++|.|+++  |
T Consensus        95 ~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~~--G  172 (303)
T PLN02730         95 TNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPG--G  172 (303)
T ss_pred             cccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC--C
Confidence                      4899999999999999999999998543  3688899999999999999999999999999999653  8


Q ss_pred             eEEEeccccccCCCCCc-hhhhHhHHHHHHHHHHHHHHhcc-CCCC
Q 042185          119 KIINVGSVTVAAPGPWA-GTYTASKAALHSLTDTLRLELGH-FGID  162 (162)
Q Consensus       119 ~iv~isS~~~~~~~~~~-~~y~~sKaa~~~l~~~l~~e~~~-~gi~  162 (162)
                      +||++||..+..+.|.. ..|+++|+|+.+|+++|+.|+++ +|||
T Consensus       173 ~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIr  218 (303)
T PLN02730        173 ASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIR  218 (303)
T ss_pred             EEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeE
Confidence            99999999988888765 58999999999999999999986 7886

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-31  Score=190.99  Aligned_cols=162  Identities=27%  Similarity=0.402  Sum_probs=146.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC----CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD----PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||++|||++++++|+++|++|++++|+.+.+++..++    .++.++.+|+++.++++++++++.++++++|++|||+|.
T Consensus         9 Gas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~   88 (257)
T PRK07024          9 GASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDVVIANAGI   88 (257)
T ss_pred             cCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCc
Confidence            8999999999999999999999999998877655432    268899999999999999999999999999999999997


Q ss_pred             CCCCCC-CCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           77 QCVGPL-AEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        77 ~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      ...... .+.+.++|+..+++|+.+++.+++.++|.|++++.++||++||..+..+.+....|+++|++++.|+++++.|
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e  168 (257)
T PRK07024         89 SVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIKYLESLRVE  168 (257)
T ss_pred             CCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHHHHHHHHHHH
Confidence            643333 3378899999999999999999999999998888899999999999999999999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      ++++||+
T Consensus       169 ~~~~gi~  175 (257)
T PRK07024        169 LRPAGVR  175 (257)
T ss_pred             hhccCcE
Confidence            9998875

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=1.1e-31  Score=193.92  Aligned_cols=162  Identities=30%  Similarity=0.425  Sum_probs=145.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||++|||++++++|+++|++|++++|+.+..++..+    ..++.++.+|++|.++++++++++.++++++|++|||||.
T Consensus        25 Gas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~li~~Ag~  104 (280)
T PLN02253         25 GGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGL  104 (280)
T ss_pred             CCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCc
Confidence            899999999999999999999999998765554432    2467899999999999999999999999999999999997


Q ss_pred             CCC--CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           77 QCV--GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        77 ~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      ...  .++.+.+.++|+.++++|+.+++.+++++++.|.+++.|+||+++|..+..+.+....|+++|++++++++.++.
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~  184 (280)
T PLN02253        105 TGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSVAA  184 (280)
T ss_pred             CCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHHHHHHHHHHHHHHH
Confidence            532  457788999999999999999999999999999877789999999999988888888999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |+++.|||
T Consensus       185 e~~~~gi~  192 (280)
T PLN02253        185 ELGKHGIR  192 (280)
T ss_pred             HhhhcCeE
Confidence            99998875

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=1.3e-31  Score=189.15  Aligned_cols=161  Identities=17%  Similarity=0.155  Sum_probs=141.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||++|||++++++|+++|++|++++|+.+...+........++.+|+++.++++.+++++.+.++++|++|||+|.....
T Consensus         9 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~   88 (236)
T PRK06483          9 GAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHNASDWLAE   88 (236)
T ss_pred             CCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEECCccccCC
Confidence            89999999999999999999999999875433322223467889999999999999999999999999999999986555


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC--CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK--KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ...+.+.++|++++++|+.+++.+++.+.|.|++++  .++||++||..+..+.+....|+++|+++++|+++++.|+++
T Consensus        89 ~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal~~l~~~~a~e~~~  168 (236)
T PRK06483         89 KPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDNMTLSFAAKLAP  168 (236)
T ss_pred             CcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHHHHHHHHHHHHHCC
Confidence            566778999999999999999999999999998765  689999999998888888999999999999999999999987


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                       +||
T Consensus       169 -~ir  171 (236)
T PRK06483        169 -EVK  171 (236)
T ss_pred             -CcE
Confidence             365

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-31  Score=192.29  Aligned_cols=162  Identities=19%  Similarity=0.222  Sum_probs=143.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEec-ChhhHHhhh----c--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGR-SKATMADLE----Q--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r-~~~~~~~~~----~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||++|||+++++.|+++|++|++++| +.+.+++..    .  ..++.++.+|++|+++++++++++.+.++++|++|||
T Consensus        15 Gas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~n   94 (260)
T PRK08416         15 GGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFDRVDFFISN   94 (260)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCCccEEEEC
Confidence            89999999999999999999998865 444443322    1  2467899999999999999999999999999999999


Q ss_pred             CCCCC------CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHH
Q 042185           74 AGVQC------VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHS  147 (162)
Q Consensus        74 ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~  147 (162)
                      ||...      ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+....|+++|+++++
T Consensus        95 Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  174 (260)
T PRK08416         95 AIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGTSKAAVET  174 (260)
T ss_pred             ccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCcccchhhHHHHHH
Confidence            98642      246677889999999999999999999999999987777899999999988888999999999999999


Q ss_pred             HHHHHHHHhccCCCC
Q 042185          148 LTDTLRLELGHFGID  162 (162)
Q Consensus       148 l~~~l~~e~~~~gi~  162 (162)
                      |+++++.|++++|||
T Consensus       175 ~~~~la~el~~~gi~  189 (260)
T PRK08416        175 MVKYAATELGEKNIR  189 (260)
T ss_pred             HHHHHHHHhhhhCeE
Confidence            999999999999986

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-31  Score=191.68  Aligned_cols=162  Identities=28%  Similarity=0.389  Sum_probs=149.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+++||++++++|+++|++|++++|+.+.+++...     ..++.++.+|+++.++++.+++++.+.++++|++|||+|
T Consensus        17 Ga~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag   96 (265)
T PRK07097         17 GASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAG   96 (265)
T ss_pred             CCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence            899999999999999999999999999876655432     246889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....++.+.+.++|++++++|+.+++.+++.++|.|++++.++||++||..+..+.+....|+++|+++..|+++++.|
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~l~~~la~e  176 (265)
T PRK07097         97 IIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASE  176 (265)
T ss_pred             CCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHHHHHHHHHHHHHHHH
Confidence            88777888899999999999999999999999999998877899999999988888888999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      +.++||+
T Consensus       177 ~~~~gi~  183 (265)
T PRK07097        177 YGEANIQ  183 (265)
T ss_pred             hhhcCce
Confidence            9999885

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-31  Score=190.86  Aligned_cols=161  Identities=30%  Similarity=0.438  Sum_probs=146.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhh---c--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLE---Q--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~---~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||.+++++|+++|++|++++|+ +..+++.   .  ..++.++.+|+++.++++.+++++.+.++++|++|||+|
T Consensus        22 Gas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag  100 (258)
T PRK06935         22 GGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAG  100 (258)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            899999999999999999999999988 3322221   1  346789999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+..+.|+++|+++++|++++++|
T Consensus       101 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e  180 (258)
T PRK06935        101 TIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANE  180 (258)
T ss_pred             CCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHHHHHHHHHHHHHHH
Confidence            87667788889999999999999999999999999998887899999999999988899999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      ++++|||
T Consensus       181 ~~~~gi~  187 (258)
T PRK06935        181 LAAYNIQ  187 (258)
T ss_pred             hhhhCeE
Confidence            9999885

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-31  Score=191.86  Aligned_cols=159  Identities=40%  Similarity=0.631  Sum_probs=148.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+||||++++++|+++|++|++++|+.+..+..   ..+.++.+|++|+++++.+++++.+.++++|++|||+|....+
T Consensus        11 Gasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag~~~~~   87 (270)
T PRK06179         11 GASSGIGRATAEKLARAGYRVFGTSRNPARAAPI---PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAG   87 (270)
T ss_pred             cCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc---CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCc
Confidence            8999999999999999999999999987654432   4678899999999999999999999999999999999998778


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccCC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG  160 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~g  160 (162)
                      ++.+.+.++++..+++|+.+++.+++.++|.|++++.++||++||..+..+.+....|+++|++++.|++.++.|+++.|
T Consensus        88 ~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~el~~~g  167 (270)
T PRK06179         88 AAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQFG  167 (270)
T ss_pred             CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHHHHHHHHHHHHhhhC
Confidence            88889999999999999999999999999999888889999999999999999999999999999999999999999988


Q ss_pred             CC
Q 042185          161 ID  162 (162)
Q Consensus       161 i~  162 (162)
                      |+
T Consensus       168 i~  169 (270)
T PRK06179        168 IR  169 (270)
T ss_pred             cE
Confidence            75

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-31  Score=191.53  Aligned_cols=159  Identities=23%  Similarity=0.297  Sum_probs=136.9

Q ss_pred             CC--CCchHHHHHHHHHHCCCeEEEEecCh--hhHHhhhcC--CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CS--QGGIGHALARAFAASDCRVVATGRSK--ATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga--~~giG~~ia~~l~~~g~~vi~~~r~~--~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||  ++|||+++|++|+++|++|++++|+.  +.++++.++  ....++.+|++|+++++.+++++.+.++++|++||||
T Consensus        14 Ga~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~iD~li~nA   93 (256)
T PRK07889         14 GVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDGLDGVVHSI   93 (256)
T ss_pred             CCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCCCcEEEEcc
Confidence            55  89999999999999999999998764  334444332  3567899999999999999999999999999999999


Q ss_pred             CCCCC----CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           75 GVQCV----GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        75 g~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      |+...    .++.+.+.++|++.+++|+.+++.+++.++|.|++  +|+||++++. +..+.+.+..|++||+|+.+|++
T Consensus        94 G~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~-~~~~~~~~~~Y~asKaal~~l~~  170 (256)
T PRK07889         94 GFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFD-ATVAWPAYDWMGVAKAALESTNR  170 (256)
T ss_pred             ccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeec-ccccCCccchhHHHHHHHHHHHH
Confidence            98643    35777889999999999999999999999999963  4899999865 34556778889999999999999


Q ss_pred             HHHHHhccCCCC
Q 042185          151 TLRLELGHFGID  162 (162)
Q Consensus       151 ~l~~e~~~~gi~  162 (162)
                      +|+.|++++|||
T Consensus       171 ~la~el~~~gIr  182 (256)
T PRK07889        171 YLARDLGPRGIR  182 (256)
T ss_pred             HHHHHhhhcCeE
Confidence            999999999986

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-31  Score=190.07  Aligned_cols=162  Identities=30%  Similarity=0.454  Sum_probs=145.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||++++++|+++|++|++++|+.+..+++.+     ...+.++.+|++++++++++++++.++++++|++|||+|
T Consensus         8 G~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lI~~ag   87 (252)
T PRK07677          8 GGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDALINNAA   87 (252)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCC
Confidence            899999999999999999999999999876655432     246789999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-CCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      .....++.+.+.++|++++++|+.+++.++++++|.|.++ ..++||++||..+..+.+....|+++|+++++|+++|+.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~  167 (252)
T PRK07677         88 GNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAV  167 (252)
T ss_pred             CCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHHHHHHHHHH
Confidence            7656678889999999999999999999999999998654 368999999999988888889999999999999999999


Q ss_pred             Hhcc-CCCC
Q 042185          155 ELGH-FGID  162 (162)
Q Consensus       155 e~~~-~gi~  162 (162)
                      |+.+ +|||
T Consensus       168 e~~~~~gi~  176 (252)
T PRK07677        168 EWGRKYGIR  176 (252)
T ss_pred             HhCcccCeE
Confidence            9975 6775

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=2.1e-31  Score=190.03  Aligned_cols=162  Identities=26%  Similarity=0.395  Sum_probs=144.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh--hHHhhhc-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA--TMADLEQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~--~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      ||++|||++++++|+++|++|++++++..  ..+++.. ...+.++.+|++|.++++.+++++.++++++|++|||||..
T Consensus        17 G~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~li~~Ag~~   96 (253)
T PRK08993         17 GCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLI   96 (253)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence            89999999999999999999998887542  1222222 34678899999999999999999999999999999999987


Q ss_pred             CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHh
Q 042185           78 CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                      ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.+....|+++|+|+++++++++.|+
T Consensus        97 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~  176 (253)
T PRK08993         97 RREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEW  176 (253)
T ss_pred             CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHHHHHHHHHHHHHHHh
Confidence            777788899999999999999999999999999997664 5899999999999999999999999999999999999999


Q ss_pred             ccCCCC
Q 042185          157 GHFGID  162 (162)
Q Consensus       157 ~~~gi~  162 (162)
                      .++|||
T Consensus       177 ~~~gi~  182 (253)
T PRK08993        177 AKHNIN  182 (253)
T ss_pred             hhhCeE
Confidence            999885

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=2.9e-31  Score=189.45  Aligned_cols=162  Identities=27%  Similarity=0.370  Sum_probs=147.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||++++++|+++|++|++++|+.+..+++..     ...+.++.+|++++++++.+++++.++++++|++|||+|
T Consensus         9 Gas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag   88 (256)
T PRK08643          9 GAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAG   88 (256)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            899999999999999999999999999876655433     246778999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      .....++.+.+.++|+..+++|+.+++.+++.+++.|++.+ .++||++||..+..+.+....|+++|++++.|++.++.
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~  168 (256)
T PRK08643         89 VAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAAR  168 (256)
T ss_pred             CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHHHHHHHHHH
Confidence            87777888899999999999999999999999999997654 57999999999999989999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |+.++|||
T Consensus       169 e~~~~gi~  176 (256)
T PRK08643        169 DLASEGIT  176 (256)
T ss_pred             HhcccCcE
Confidence            99999885

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-31  Score=190.15  Aligned_cols=162  Identities=25%  Similarity=0.353  Sum_probs=147.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+++||.+++++|+++|++|++++|+.+..++..+       ..++.++.+|+++.++++.+++++.+.++++|++|||
T Consensus         9 G~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vv~~   88 (259)
T PRK12384          9 GGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYN   88 (259)
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            899999999999999999999999998776554432       1468899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTL  152 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l  152 (162)
                      +|.....++.+.+.++|+..+++|+.+++.+++++.+.|.+++ .++||++||..+..+.+....|+++|++++++++++
T Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~~~l~~~l  168 (259)
T PRK12384         89 AGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSL  168 (259)
T ss_pred             CCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHHHHHHHHHH
Confidence            9988777888899999999999999999999999999998766 689999999888888888899999999999999999


Q ss_pred             HHHhccCCCC
Q 042185          153 RLELGHFGID  162 (162)
Q Consensus       153 ~~e~~~~gi~  162 (162)
                      +.|++++|||
T Consensus       169 a~e~~~~gi~  178 (259)
T PRK12384        169 ALDLAEYGIT  178 (259)
T ss_pred             HHHHHHcCcE
Confidence            9999999885

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-31  Score=196.18  Aligned_cols=159  Identities=32%  Similarity=0.438  Sum_probs=147.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||++++++|+++|++|++++|+.+.+++..+     ..++.++.+|++|.++++++++++.++++++|++|||+|
T Consensus        15 Gas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~lInnAg   94 (334)
T PRK07109         15 GASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPIDTWVNNAM   94 (334)
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCC
Confidence            899999999999999999999999999877665433     356788999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..++.+.+....|+++|+++.+|+++++.|
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e  174 (334)
T PRK07109         95 VTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCE  174 (334)
T ss_pred             cCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHHHHHHHHHHHHHH
Confidence            87777888999999999999999999999999999998877899999999999999999999999999999999999999


Q ss_pred             hccC
Q 042185          156 LGHF  159 (162)
Q Consensus       156 ~~~~  159 (162)
                      +...
T Consensus       175 l~~~  178 (334)
T PRK07109        175 LLHD  178 (334)
T ss_pred             Hhhc
Confidence            9754

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=3.2e-31  Score=191.40  Aligned_cols=162  Identities=27%  Similarity=0.415  Sum_probs=146.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||++++++|+++|++|++++|+.+..+++.+     ..++.++.+|+++++++..+++++.++++++|++|||+|
T Consensus        17 Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag   96 (278)
T PRK08277         17 GGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCDILINGAG   96 (278)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            899999999999999999999999999776554432     246788999999999999999999999999999999999


Q ss_pred             CCCC---------------CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhH
Q 042185           76 VQCV---------------GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTA  140 (162)
Q Consensus        76 ~~~~---------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~  140 (162)
                      ....               .++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|++
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~  176 (278)
T PRK08277         97 GNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTKVPAYSA  176 (278)
T ss_pred             CCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCCCCCchhHH
Confidence            6432               2466788999999999999999999999999998877899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCCC
Q 042185          141 SKAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       141 sKaa~~~l~~~l~~e~~~~gi~  162 (162)
                      +|++++.|+++++.|+++.|||
T Consensus       177 sK~a~~~l~~~la~e~~~~gir  198 (278)
T PRK08277        177 AKAAISNFTQWLAVHFAKVGIR  198 (278)
T ss_pred             HHHHHHHHHHHHHHHhCccCeE
Confidence            9999999999999999998885

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=4.6e-31  Score=188.59  Aligned_cols=162  Identities=25%  Similarity=0.351  Sum_probs=148.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||++|||++++++|+++|++|++++|+.+..++..+       ..++.++.+|++++++++.+++++.+.++++|++|||
T Consensus        16 Ga~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~   95 (257)
T PRK09242         16 GASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNN   95 (257)
T ss_pred             CCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            899999999999999999999999999877655432       3567889999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      +|.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.+....|+++|++++.|+++++
T Consensus        96 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la  175 (257)
T PRK09242         96 AGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLA  175 (257)
T ss_pred             CCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHHHHHHHHHHHHHHH
Confidence            99876677788899999999999999999999999999988778999999999999999999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|+.+.|||
T Consensus       176 ~e~~~~~i~  184 (257)
T PRK09242        176 VEWAEDGIR  184 (257)
T ss_pred             HHHHHhCeE
Confidence            999988875

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-31  Score=190.29  Aligned_cols=162  Identities=40%  Similarity=0.580  Sum_probs=149.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC--CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||+||||++++++|+++|++|++++|+.+.++.+...  .++.++.+|++|.+++..+++++.+.++++|++|||+|...
T Consensus        11 GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv~~ag~~~   90 (277)
T PRK06180         11 GVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGH   90 (277)
T ss_pred             cCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCccC
Confidence            8999999999999999999999999998877665443  46788899999999999999999999999999999999877


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      .+++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|+++++++++++.|+++
T Consensus        91 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~  170 (277)
T PRK06180         91 EGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAP  170 (277)
T ss_pred             CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHHHHHHHHHHHhhh
Confidence            77888899999999999999999999999999998877789999999999999999999999999999999999999998


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      .||+
T Consensus       171 ~gi~  174 (277)
T PRK06180        171 FGIH  174 (277)
T ss_pred             hCcE
Confidence            8875

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-31  Score=190.13  Aligned_cols=162  Identities=23%  Similarity=0.301  Sum_probs=145.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhh-------HHhhh-----cCCceeEEEeccCChHHHHHHHHHHHHHcCCcc
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKAT-------MADLE-----QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKID   68 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~-------~~~~~-----~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id   68 (162)
                      ||++|||.++|++|+++|++|++++|+.+.       +++..     ...++.++.+|+++.++++.+++++.+.++++|
T Consensus        13 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   92 (273)
T PRK08278         13 GASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVERFGGID   92 (273)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            899999999999999999999999997542       22211     134688999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC--CCchhhhHhHHHHH
Q 042185           69 VLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG--PWAGTYTASKAALH  146 (162)
Q Consensus        69 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~--~~~~~y~~sKaa~~  146 (162)
                      ++|||+|.....++.+.+.++|++.+++|+.+++.+++++.|.|+++..++|+++||..+..+.  ++...|+++|++++
T Consensus        93 ~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~~sK~a~~  172 (273)
T PRK08278         93 ICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHTAYTMAKYGMS  172 (273)
T ss_pred             EEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCCcchhHHHHHHHH
Confidence            9999999877778888999999999999999999999999999988777899999998877776  78899999999999


Q ss_pred             HHHHHHHHHhccCCCC
Q 042185          147 SLTDTLRLELGHFGID  162 (162)
Q Consensus       147 ~l~~~l~~e~~~~gi~  162 (162)
                      .|+++++.|++++|||
T Consensus       173 ~~~~~la~el~~~~I~  188 (273)
T PRK08278        173 LCTLGLAEEFRDDGIA  188 (273)
T ss_pred             HHHHHHHHHhhhcCcE
Confidence            9999999999999885

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-31  Score=189.21  Aligned_cols=162  Identities=35%  Similarity=0.492  Sum_probs=149.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+++||++++++|+++|++|++++|+++..++..+     ..++.++.+|++|+++++.+++++.++++++|++|||+|
T Consensus        17 Ga~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag   96 (255)
T PRK07523         17 GSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAG   96 (255)
T ss_pred             CCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            899999999999999999999999999876654432     245788999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....++.+.+.++|++.+++|+.+++.+++.+.+.|.+++.++||++||..+..+.+....|+++|++++.++++++.|
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~~a~e  176 (255)
T PRK07523         97 MQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATD  176 (255)
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHHHHHHHHHHHHHHHH
Confidence            88778888899999999999999999999999999998777899999999999888999999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      ++++|||
T Consensus       177 ~~~~gi~  183 (255)
T PRK07523        177 WAKHGLQ  183 (255)
T ss_pred             hhHhCeE
Confidence            9998875

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-31  Score=188.49  Aligned_cols=162  Identities=28%  Similarity=0.395  Sum_probs=146.6

Q ss_pred             CCCC-chHHHHHHHHHHCCCeEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            1 CSQG-GIGHALARAFAASDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         1 Ga~~-giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      ||+| |||+++++.|+++|++|++++|+.+.+++..+       ..++.++.+|++++++++.+++++.+.++++|++||
T Consensus        24 G~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~  103 (262)
T PRK07831         24 AAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVN  103 (262)
T ss_pred             CCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            6774 99999999999999999999998876654432       135778999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHH
Q 042185           73 NAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDT  151 (162)
Q Consensus        73 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~  151 (162)
                      |+|.....++.+.+.++|++.+++|+.+++.+++.++|.|++.. .+.||+++|..+..+.++...|+++|+++++|+++
T Consensus       104 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sKaal~~~~~~  183 (262)
T PRK07831        104 NAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRC  183 (262)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHHHHHHHHHHHHH
Confidence            99987777888899999999999999999999999999998765 78999999999988888999999999999999999


Q ss_pred             HHHHhccCCCC
Q 042185          152 LRLELGHFGID  162 (162)
Q Consensus       152 l~~e~~~~gi~  162 (162)
                      ++.|++++|||
T Consensus       184 la~e~~~~gI~  194 (262)
T PRK07831        184 SALEAAEYGVR  194 (262)
T ss_pred             HHHHhCccCeE
Confidence            99999999986

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=6e-31  Score=188.02  Aligned_cols=162  Identities=24%  Similarity=0.352  Sum_probs=143.2

Q ss_pred             CCC--CchHHHHHHHHHHCCCeEEEEecC-----------hhhHHhh----hc-CCceeEEEeccCChHHHHHHHHHHHH
Q 042185            1 CSQ--GGIGHALARAFAASDCRVVATGRS-----------KATMADL----EQ-DPRFFVQELDVLSEQSVQNVLSNVLE   62 (162)
Q Consensus         1 Ga~--~giG~~ia~~l~~~g~~vi~~~r~-----------~~~~~~~----~~-~~~~~~~~~D~~~~~~i~~~~~~~~~   62 (162)
                      ||+  +|||+++|++|+++|++|++++++           .+...+.    .. ..++.++++|+++.++++++++++.+
T Consensus        13 Gas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~~~~~~~~   92 (256)
T PRK12859         13 GVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPKELLNKVTE   92 (256)
T ss_pred             CCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            676  599999999999999999987542           1112121    11 35678899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhH
Q 042185           63 KFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASK  142 (162)
Q Consensus        63 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK  142 (162)
                      .++++|++|||+|.....++.+.+.++|++.+++|+.+++.+.++++|.|.+++.|+||++||..+..+.+++..|+++|
T Consensus        93 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  172 (256)
T PRK12859         93 QLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMVGELAYAATK  172 (256)
T ss_pred             HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCCCCchHHHHHH
Confidence            99999999999998777788899999999999999999999999999999877789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCCC
Q 042185          143 AALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       143 aa~~~l~~~l~~e~~~~gi~  162 (162)
                      +++++|+++++.+++++|||
T Consensus       173 ~a~~~l~~~la~~~~~~~i~  192 (256)
T PRK12859        173 GAIDALTSSLAAEVAHLGIT  192 (256)
T ss_pred             HHHHHHHHHHHHHhhhhCeE
Confidence            99999999999999998885

>PRK06484 short chain dehydrogenase; Validated

Probab=99.98  E-value=3.5e-31  Score=205.87  Aligned_cols=160  Identities=29%  Similarity=0.446  Sum_probs=146.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++.+  ..+...+.+|++|+++++++++++.+.++++|++|||||...
T Consensus       276 Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~nAg~~~  355 (520)
T PRK06484        276 GGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAE  355 (520)
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcC
Confidence            899999999999999999999999999887776654  245677899999999999999999999999999999999863


Q ss_pred             -CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhc
Q 042185           79 -VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus        79 -~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                       ..++.+.+.++|++++++|+.+++.+++.++|.|  ++.|+||++||..+..+.++...|+++|+++++|+++++.|++
T Consensus       356 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  433 (520)
T PRK06484        356 VFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLM--SQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWA  433 (520)
T ss_pred             CCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh--ccCCEEEEECchhhcCCCCCCchhHHHHHHHHHHHHHHHHHhh
Confidence             3577888999999999999999999999999999  4468999999999999999999999999999999999999999


Q ss_pred             cCCCC
Q 042185          158 HFGID  162 (162)
Q Consensus       158 ~~gi~  162 (162)
                      ++|||
T Consensus       434 ~~gI~  438 (520)
T PRK06484        434 PAGIR  438 (520)
T ss_pred             hhCeE
Confidence            99986

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.1e-30  Score=187.84  Aligned_cols=162  Identities=28%  Similarity=0.404  Sum_probs=149.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+||||++++++|+++|++|++++|+.+.+++...     +..+.++.+|++++++++.+++.+.++++++|++|||+|
T Consensus         7 GasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~lI~~ag   86 (270)
T PRK05650          7 GAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVIVNNAG   86 (270)
T ss_pred             cCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            899999999999999999999999999876654322     356888999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....++.+.+.++|++.+++|+.+++.+++.++|.|++.+.++||++||..+..+.+....|+++|+++++|+++++.|
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~e  166 (270)
T PRK05650         87 VASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVE  166 (270)
T ss_pred             CCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence            98778888999999999999999999999999999998777789999999999999999999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      +.+.||+
T Consensus       167 ~~~~gi~  173 (270)
T PRK05650        167 LADDEIG  173 (270)
T ss_pred             hcccCcE
Confidence            9988874

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.2e-30  Score=188.16  Aligned_cols=162  Identities=36%  Similarity=0.550  Sum_probs=150.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||+|+||++++++|+++|++|++++|+.+.++++..  ...+.++++|+++.++++.+++++.+.++++|++|||+|...
T Consensus        10 Gasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~   89 (275)
T PRK08263         10 GASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGL   89 (275)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcc
Confidence            899999999999999999999999999887766544  245778899999999999999999999999999999999988


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      .+++.+.+.++|++.+++|+.+++.+++.++|.|++++.+++|++||..+..+.+....|+++|++++++++.++.++++
T Consensus        90 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~  169 (275)
T PRK08263         90 FGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAE  169 (275)
T ss_pred             ccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHHHHHHHHHHHhhh
Confidence            78888999999999999999999999999999998877789999999999999999999999999999999999999998


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      .||+
T Consensus       170 ~gi~  173 (275)
T PRK08263        170 FGIK  173 (275)
T ss_pred             hCcE
Confidence            8875

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.98  E-value=5.3e-31  Score=193.60  Aligned_cols=160  Identities=29%  Similarity=0.434  Sum_probs=135.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcC--CccEEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFG--KIDVLV   71 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--~id~vi   71 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++.+       +..+..+.+|+++  ++...++++.+.++  ++|++|
T Consensus        60 GAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~~~didilV  137 (320)
T PLN02780         60 GPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIEGLDVGVLI  137 (320)
T ss_pred             CCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhcCCCccEEE
Confidence            899999999999999999999999999987766533       2356788999985  33444444444444  566999


Q ss_pred             ECCCCCCC--CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC-C-CCCchhhhHhHHHHHH
Q 042185           72 NNAGVQCV--GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA-P-GPWAGTYTASKAALHS  147 (162)
Q Consensus        72 ~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-~-~~~~~~y~~sKaa~~~  147 (162)
                      ||||....  .++.+.+.+++++.+++|+.+++.+++.++|.|.+++.|+||++||..+.. + .|....|++||+++++
T Consensus       138 nnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~aSKaal~~  217 (320)
T PLN02780        138 NNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQ  217 (320)
T ss_pred             EecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHHHHHHHHHH
Confidence            99998643  467788999999999999999999999999999888889999999998864 4 5788999999999999


Q ss_pred             HHHHHHHHhccCCCC
Q 042185          148 LTDTLRLELGHFGID  162 (162)
Q Consensus       148 l~~~l~~e~~~~gi~  162 (162)
                      |+++|+.|++++||+
T Consensus       218 ~~~~L~~El~~~gI~  232 (320)
T PLN02780        218 FSRCLYVEYKKSGID  232 (320)
T ss_pred             HHHHHHHHHhccCeE
Confidence            999999999999985

>PRK05855 short chain dehydrogenase; Validated

Probab=99.98  E-value=6.8e-31  Score=206.19  Aligned_cols=162  Identities=28%  Similarity=0.380  Sum_probs=149.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+||||++++++|+++|++|++++|+.+.++++..     ...+.++.+|++|+++++++++++.+.+|++|++|||||
T Consensus       322 G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag  401 (582)
T PRK05855        322 GAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAG  401 (582)
T ss_pred             CCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCCcEEEECCc
Confidence            899999999999999999999999999877665432     246789999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      ....+++.+.+.++|++++++|+.+++.+++.++|.|++++ +|+||++||.+++.+.++...|+++|+++++|+++++.
T Consensus       402 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~  481 (582)
T PRK05855        402 IGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRA  481 (582)
T ss_pred             cCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHHHHHHHHHHHHHH
Confidence            98778888999999999999999999999999999998765 58999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++||+
T Consensus       482 e~~~~gi~  489 (582)
T PRK05855        482 ELAAAGIG  489 (582)
T ss_pred             HhcccCcE
Confidence            99999985

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.4e-30  Score=185.68  Aligned_cols=162  Identities=28%  Similarity=0.389  Sum_probs=146.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|+||.+++++|+++|++|++++|+.+..++...     ..++.++.+|+++.++++.+++++.+.++++|++|||+|
T Consensus        14 Gas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag   93 (253)
T PRK06172         14 GGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAG   93 (253)
T ss_pred             CCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence            899999999999999999999999999776554322     346889999999999999999999999999999999999


Q ss_pred             CCCC-CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           76 VQCV-GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        76 ~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      .... .++.+.+.++|++.+++|+.+++.++++++|.|.+++.+++|++||..+..+.+....|+++|+++++|+++++.
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~  173 (253)
T PRK06172         94 IEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAI  173 (253)
T ss_pred             CCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHHHHHHHHHHHH
Confidence            8543 457788999999999999999999999999999877778999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |+.++|||
T Consensus       174 e~~~~~i~  181 (253)
T PRK06172        174 EYAKKGIR  181 (253)
T ss_pred             HhcccCeE
Confidence            99998875

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.98  E-value=1.3e-30  Score=185.30  Aligned_cols=162  Identities=30%  Similarity=0.441  Sum_probs=144.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhh--HHhhhc-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKAT--MADLEQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~--~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      ||++|||.++|++|+++|++|++++|+...  .+.... ...+.++.+|++++++++.+++++.+.++++|++|||+|..
T Consensus        12 Gas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~   91 (248)
T TIGR01832        12 GANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGII   91 (248)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            899999999999999999999999997521  122222 34678999999999999999999999999999999999987


Q ss_pred             CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHh
Q 042185           78 CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                      ...++.+.+.++|++.+++|+.+++.+++++++.|.+++ .++||++||..+..+.+....|+++|+++++++++++.|+
T Consensus        92 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~  171 (248)
T TIGR01832        92 RRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHGVAGLTKLLANEW  171 (248)
T ss_pred             CCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHHHHHHHHHHHHHHh
Confidence            777777889999999999999999999999999987665 6899999999998888889999999999999999999999


Q ss_pred             ccCCCC
Q 042185          157 GHFGID  162 (162)
Q Consensus       157 ~~~gi~  162 (162)
                      +++|||
T Consensus       172 ~~~gi~  177 (248)
T TIGR01832       172 AAKGIN  177 (248)
T ss_pred             CccCcE
Confidence            999885

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.1e-30  Score=186.04  Aligned_cols=162  Identities=26%  Similarity=0.421  Sum_probs=146.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||.+++++|+++|++|++++|+.+.++++.+     .....++.+|+++.++++.+++++.+.++++|++|||+|
T Consensus        15 Gas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag   94 (252)
T PRK07035         15 GASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLDILVNNAA   94 (252)
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            899999999999999999999999998776554433     245778999999999999999999999999999999999


Q ss_pred             CCC-CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           76 VQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        76 ~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      ... ..++.+.+.++|+..+++|+.+++.++++++|+|++.+.++|+++||..+..+.++...|+++|+++++|+++++.
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~al~~~~~~l~~  174 (252)
T PRK07035         95 ANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAK  174 (252)
T ss_pred             cCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHHHHHHHHHHHHHHH
Confidence            643 3567788999999999999999999999999999877789999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |+.++||+
T Consensus       175 e~~~~gi~  182 (252)
T PRK07035        175 ECAPFGIR  182 (252)
T ss_pred             HHhhcCEE
Confidence            99999875

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.98  E-value=1.3e-30  Score=186.29  Aligned_cols=162  Identities=32%  Similarity=0.450  Sum_probs=148.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||+++||.++|++|+++|++|++++|+.+..++..+  ...+.++.+|++++++++.+++.+.+.++++|++|||+|...
T Consensus        13 Gas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~   92 (257)
T PRK07067         13 GAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAALFD   92 (257)
T ss_pred             CCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence            899999999999999999999999999887766544  245788999999999999999999999999999999999877


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                      ..++.+.+.++|+..+++|+.+++.+++++++.|.++. +++||++||..+..+.++...|+++|++++.|+++++.|++
T Consensus        93 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~  172 (257)
T PRK07067         93 MAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALI  172 (257)
T ss_pred             CCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHHHHHHHHHHHHHHhc
Confidence            77888889999999999999999999999999987653 57999999998888999999999999999999999999999


Q ss_pred             cCCCC
Q 042185          158 HFGID  162 (162)
Q Consensus       158 ~~gi~  162 (162)
                      ++|||
T Consensus       173 ~~gi~  177 (257)
T PRK07067        173 RHGIN  177 (257)
T ss_pred             ccCeE
Confidence            98875

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.98  E-value=2e-30  Score=185.58  Aligned_cols=162  Identities=31%  Similarity=0.441  Sum_probs=149.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc---CCceeEEEeccCChHHHHHHHHHHHHH-cCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ---DPRFFVQELDVLSEQSVQNVLSNVLEK-FGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~-~~~id~vi~~ag~   76 (162)
                      ||+||||++++++|+++|++|++++|+.+.++++..   ...+.++.+|+++.++++++++.+.+. ++++|++|||+|.
T Consensus         8 Gasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~vi~~ag~   87 (260)
T PRK08267          8 GAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVLFNNAGI   87 (260)
T ss_pred             CCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEECCCC
Confidence            899999999999999999999999999887776644   356889999999999999999998776 7899999999998


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHh
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                      ....++.+.+.++++..+++|+.+++.+++.+.+.|+.++.++||++||..+..+.+....|+.+|++++.|+++++.++
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~~~  167 (260)
T PRK08267         88 LRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEW  167 (260)
T ss_pred             CCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHHHHHHHHHHh
Confidence            87778888999999999999999999999999999988778999999999999999999999999999999999999999


Q ss_pred             ccCCCC
Q 042185          157 GHFGID  162 (162)
Q Consensus       157 ~~~gi~  162 (162)
                      .+.|||
T Consensus       168 ~~~~i~  173 (260)
T PRK08267        168 RRHGIR  173 (260)
T ss_pred             cccCcE
Confidence            988875

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.7e-30  Score=189.06  Aligned_cols=162  Identities=31%  Similarity=0.498  Sum_probs=142.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+||||+++|++|+++|++|++++|+.+.++++.+     ...+.++.+|++|.++++.+++.+.+.++++|++|||||
T Consensus        47 GasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG  126 (293)
T PRK05866         47 GASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAG  126 (293)
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            899999999999999999999999999877665533     245778999999999999999999999999999999999


Q ss_pred             CCCCCCCCCC--ChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC-CCCCchhhhHhHHHHHHHHHHH
Q 042185           76 VQCVGPLAEV--PLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA-PGPWAGTYTASKAALHSLTDTL  152 (162)
Q Consensus        76 ~~~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-~~~~~~~y~~sKaa~~~l~~~l  152 (162)
                      .....++.+.  +.++++..+++|+.+++.++++++|.|++++.++||++||..+.. +.+....|+++|+++++|++++
T Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y~asKaal~~l~~~l  206 (293)
T PRK05866        127 RSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNASKAALSAVSRVI  206 (293)
T ss_pred             CCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchHHHHHHHHHHHHHHH
Confidence            8765555443  468899999999999999999999999888889999999976654 4677889999999999999999


Q ss_pred             HHHhccCCCC
Q 042185          153 RLELGHFGID  162 (162)
Q Consensus       153 ~~e~~~~gi~  162 (162)
                      +.|++++||+
T Consensus       207 a~e~~~~gI~  216 (293)
T PRK05866        207 ETEWGDRGVH  216 (293)
T ss_pred             HHHhcccCcE
Confidence            9999998885

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.98  E-value=1.1e-30  Score=187.25  Aligned_cols=160  Identities=29%  Similarity=0.414  Sum_probs=140.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC--CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||++++++|+++|++|++++|+.+.++++.+.  ..+.++.+|+++.++++.+++++.++++++|++|||||...
T Consensus        12 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~   91 (262)
T TIGR03325        12 GGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWD   91 (262)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCc
Confidence            8999999999999999999999999998877766543  45788999999999999999999999999999999999753


Q ss_pred             C-CCCCCCCh----HHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           79 V-GPLAEVPL----SAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        79 ~-~~~~~~~~----~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      . .++.+.+.    ++|++.+++|+.+++.++++++|.|.++ ++++|+++|..+..+.+....|+++|+++++|++.++
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~l~~~la  170 (262)
T TIGR03325        92 YSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS-RGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELA  170 (262)
T ss_pred             cCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc-CCCEEEEeccceecCCCCCchhHHHHHHHHHHHHHHH
Confidence            2 34444443    5799999999999999999999999755 4899999999999888888999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|+++. ||
T Consensus       171 ~e~~~~-ir  178 (262)
T TIGR03325       171 FELAPY-VR  178 (262)
T ss_pred             HhhccC-eE
Confidence            999886 64

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.9e-30  Score=185.07  Aligned_cols=162  Identities=35%  Similarity=0.448  Sum_probs=146.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhh--cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLE--QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||+++||.+++++|+++|++|++++|+.+..+...  ......++.+|++++++++.+++++.+.++++|++|||+|...
T Consensus        22 Gas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~  101 (255)
T PRK06841         22 GGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVAL  101 (255)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence            89999999999999999999999999876433222  1345678999999999999999999999999999999999877


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ..++.+.+.++|++.+++|+.+++.+++.+.|.|++++.++||++||..+..+.+....|+++|+++++++++++.|+++
T Consensus       102 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~  181 (255)
T PRK06841        102 LAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWGP  181 (255)
T ss_pred             CCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHHHHHHHHHHHHHHHHh
Confidence            77777889999999999999999999999999998877899999999999999999999999999999999999999999


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +|||
T Consensus       182 ~gi~  185 (255)
T PRK06841        182 YGIT  185 (255)
T ss_pred             hCeE
Confidence            8875

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.4e-30  Score=184.40  Aligned_cols=160  Identities=24%  Similarity=0.321  Sum_probs=139.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEe-cChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHH----cC--Ccc
Q 042185            1 CSQGGIGHALARAFAASDCRVVATG-RSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEK----FG--KID   68 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~-r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~----~~--~id   68 (162)
                      ||++|||+++|++|+++|++|++.+ ++.+..++...     ......+.+|+++.++++.+++++.+.    ++  ++|
T Consensus        11 Gas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~g~~~id   90 (252)
T PRK12747         11 GASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFD   90 (252)
T ss_pred             CCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhhcCCCCCC
Confidence            8999999999999999999998875 55554443321     245678899999999999999888753    34  899


Q ss_pred             EEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHH
Q 042185           69 VLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSL  148 (162)
Q Consensus        69 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l  148 (162)
                      ++|||||.....++.+.+.++|++++++|+.+++.+++.++|.|++  .|+||++||..+..+.+....|++||+++.+|
T Consensus        91 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~  168 (252)
T PRK12747         91 ILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFIAYSMTKGAINTM  168 (252)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc--CCeEEEECCcccccCCCCchhHHHHHHHHHHH
Confidence            9999999876667888999999999999999999999999999854  48999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCCC
Q 042185          149 TDTLRLELGHFGID  162 (162)
Q Consensus       149 ~~~l~~e~~~~gi~  162 (162)
                      +++++.|++++|||
T Consensus       169 ~~~la~e~~~~gir  182 (252)
T PRK12747        169 TFTLAKQLGARGIT  182 (252)
T ss_pred             HHHHHHHHhHcCCE
Confidence            99999999999986

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.97  E-value=2.1e-30  Score=185.04  Aligned_cols=161  Identities=29%  Similarity=0.447  Sum_probs=145.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||++++++|+++|++|++++|+.+..+++..     ..++.++.+|+++.++++++++.+.+.++++|++|||+|
T Consensus        18 G~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag   97 (255)
T PRK06113         18 GAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVDILVNNAG   97 (255)
T ss_pred             CCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            899999999999999999999999998776554422     246778899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....++ +.+.++|+..+++|+.+++.+++++.|.|.+.+.++||++||..+..+.++...|+++|+++++|+++++.+
T Consensus        98 ~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~  176 (255)
T PRK06113         98 GGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFD  176 (255)
T ss_pred             CCCCCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHHHHHHHHHHHHHHH
Confidence            8655555 688999999999999999999999999997777789999999999999889999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      +.++|||
T Consensus       177 ~~~~~i~  183 (255)
T PRK06113        177 LGEKNIR  183 (255)
T ss_pred             hhhhCeE
Confidence            9998885

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.97  E-value=2.7e-30  Score=184.45  Aligned_cols=162  Identities=28%  Similarity=0.435  Sum_probs=149.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+++||++++++|+++|++|++++|+.+.++++..     ..++.++.+|+++++++..+++++.+.++++|++|||+|
T Consensus        18 Gas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag   97 (256)
T PRK06124         18 GSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRLDILVNNVG   97 (256)
T ss_pred             CCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            899999999999999999999999999876554432     345889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....++.+.+.++|++.+++|+.+++.+++.+++.|.+++.+++|++||..+..+.++...|+++|++++++++.++.|
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e  177 (256)
T PRK06124         98 ARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAE  177 (256)
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHHHHHHHHHHHHHHHH
Confidence            87777888899999999999999999999999999998777899999999999999999999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      +++.|||
T Consensus       178 ~~~~~i~  184 (256)
T PRK06124        178 FGPHGIT  184 (256)
T ss_pred             HHHhCcE
Confidence            9988875

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=2.3e-30  Score=189.40  Aligned_cols=161  Identities=20%  Similarity=0.281  Sum_probs=142.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh-hhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK-ATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~-~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|++.+++. +..++..+     ..++.++.+|+++.++++++++.+.+ +|++|++||||
T Consensus        19 Gas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~-~g~iD~li~nA   97 (306)
T PRK07792         19 GAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG-LGGLDIVVNNA   97 (306)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH-hCCCCEEEECC
Confidence            8999999999999999999999998753 23332221     35678999999999999999999998 99999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-------CCCeEEEeccccccCCCCCchhhhHhHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-------KKGKIINVGSVTVAAPGPWAGTYTASKAALHS  147 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-------~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~  147 (162)
                      |.....++.+.+.++|+..+++|+.+++.+++++.++|+++       ..|+||++||..+..+.+....|+++|+++++
T Consensus        98 G~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~  177 (306)
T PRK07792         98 GITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITA  177 (306)
T ss_pred             CCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCCchHHHHHHHHHH
Confidence            98877778889999999999999999999999999998653       13799999999999888899999999999999


Q ss_pred             HHHHHHHHhccCCCC
Q 042185          148 LTDTLRLELGHFGID  162 (162)
Q Consensus       148 l~~~l~~e~~~~gi~  162 (162)
                      |++.++.|++++|||
T Consensus       178 l~~~la~e~~~~gI~  192 (306)
T PRK07792        178 LTLSAARALGRYGVR  192 (306)
T ss_pred             HHHHHHHHhhhcCeE
Confidence            999999999999885

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-30  Score=186.52  Aligned_cols=158  Identities=31%  Similarity=0.413  Sum_probs=142.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||++|||++++++|+++|++|++++++.+..+    ...+.++.+|++++++++.+++++.+.++++|++|||||.....
T Consensus        16 G~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~   91 (266)
T PRK06171         16 GGSSGIGLAIVKELLANGANVVNADIHGGDGQ----HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPR   91 (266)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCccccc----cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCc
Confidence            89999999999999999999999999875432    23677899999999999999999999999999999999975432


Q ss_pred             ---------CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHH
Q 042185           81 ---------PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDT  151 (162)
Q Consensus        81 ---------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~  151 (162)
                               ++.+.+.++|++.+++|+.+++.+++++.+.|++++.++||++||..+..+.+....|+++|+++++|+++
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~  171 (266)
T PRK06171         92 LLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRS  171 (266)
T ss_pred             cccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCchhHHHHHHHHHHHHH
Confidence                     23467899999999999999999999999999877789999999999999989999999999999999999


Q ss_pred             HHHHhccCCCC
Q 042185          152 LRLELGHFGID  162 (162)
Q Consensus       152 l~~e~~~~gi~  162 (162)
                      ++.|++++|||
T Consensus       172 la~e~~~~gi~  182 (266)
T PRK06171        172 WAKELGKHNIR  182 (266)
T ss_pred             HHHHhhhcCeE
Confidence            99999999885

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.7e-30  Score=183.48  Aligned_cols=158  Identities=32%  Similarity=0.434  Sum_probs=143.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||++|||++++++|+++|++|++++|+.+.   ......+.++.+|++++++++.+++++.+.++++|++|||+|.....
T Consensus        13 Gas~gIG~~la~~l~~~g~~v~~~~r~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~   89 (252)
T PRK07856         13 GGTRGIGAGIARAFLAAGATVVVCGRRAPE---TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYA   89 (252)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCChhh---hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence            899999999999999999999999998754   12235678899999999999999999999999999999999987777


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-CCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHF  159 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~  159 (162)
                      ++.+.+.+.|++.+++|+.+++.+++++.+.|.++ ..++||++||..+..+.+....|+++|+++++|++.++.|+++.
T Consensus        90 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~  169 (252)
T PRK07856         90 LAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAPK  169 (252)
T ss_pred             CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHHHHHHHHHHHHHHhcCC
Confidence            78888999999999999999999999999999764 45899999999999999999999999999999999999999876


Q ss_pred             CCC
Q 042185          160 GID  162 (162)
Q Consensus       160 gi~  162 (162)
                       ||
T Consensus       170 -i~  171 (252)
T PRK07856        170 -VR  171 (252)
T ss_pred             -eE
Confidence             54

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-30  Score=186.28  Aligned_cols=160  Identities=33%  Similarity=0.422  Sum_probs=142.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC--CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||++++++|+++|++|++++|+.+.++++..+  .++.++.+|++++++++.+++++.+.++++|++|||+|+..
T Consensus        13 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~   92 (263)
T PRK06200         13 GGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWD   92 (263)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCcc
Confidence            8999999999999999999999999998877766543  35788999999999999999999999999999999999754


Q ss_pred             -CCCCCCCChHH----HHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           79 -VGPLAEVPLSA----MEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        79 -~~~~~~~~~~~----~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                       ..++.+.+.++    |++++++|+.+++.++++++|.|+++ +|+||+++|..+..+.++...|+++|+++..|+++++
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la  171 (263)
T PRK06200         93 YNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLA  171 (263)
T ss_pred             cCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcCCCCCCchhHHHHHHHHHHHHHHH
Confidence             34566666665    89999999999999999999998654 5899999999999998889999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|+++. ||
T Consensus       172 ~el~~~-Ir  179 (263)
T PRK06200        172 YELAPK-IR  179 (263)
T ss_pred             HHHhcC-cE
Confidence            999874 64

>PRK07985 oxidoreductase; Provisional

Probab=99.97  E-value=2.6e-30  Score=188.15  Aligned_cols=160  Identities=24%  Similarity=0.364  Sum_probs=141.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh--hhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK--ATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~--~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||++|||++++++|+++|++|++++|+.  +..+++.+     ..++.++.+|+++.++++.+++++.+.++++|++|||
T Consensus        56 Gas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~  135 (294)
T PRK07985         56 GGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGGLDIMALV  135 (294)
T ss_pred             CCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            8999999999999999999999988653  22332221     2457789999999999999999999999999999999


Q ss_pred             CCCC-CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHH
Q 042185           74 AGVQ-CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTL  152 (162)
Q Consensus        74 ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l  152 (162)
                      +|.. ...++.+.+.++|++.+++|+.+++.++++++|.|++  .++||++||..+..+.+....|+++|+++++|++.+
T Consensus       136 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~iSS~~~~~~~~~~~~Y~asKaal~~l~~~l  213 (294)
T PRK07985        136 AGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGL  213 (294)
T ss_pred             CCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--CCEEEEECCchhccCCCCcchhHHHHHHHHHHHHHH
Confidence            9975 3456788899999999999999999999999999853  479999999999999999999999999999999999


Q ss_pred             HHHhccCCCC
Q 042185          153 RLELGHFGID  162 (162)
Q Consensus       153 ~~e~~~~gi~  162 (162)
                      +.|++++|||
T Consensus       214 a~el~~~gIr  223 (294)
T PRK07985        214 AKQVAEKGIR  223 (294)
T ss_pred             HHHHhHhCcE
Confidence            9999999986

>PRK06194 hypothetical protein; Provisional

Probab=99.97  E-value=3e-30  Score=187.06  Aligned_cols=159  Identities=30%  Similarity=0.384  Sum_probs=143.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+||||+++|++|+++|++|++++|+.+.+++...     ..++.++.+|++|.++++.+++++.+.++++|++|||||
T Consensus        13 GasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~vi~~Ag   92 (287)
T PRK06194         13 GAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVHLLFNNAG   92 (287)
T ss_pred             CCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            899999999999999999999999998766554432     346788999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCC------CeEEEeccccccCCCCCchhhhHhHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK------GKIINVGSVTVAAPGPWAGTYTASKAALHSLT  149 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~------~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~  149 (162)
                      ....+++.+.+.++|+..+++|+.+++.+++.++|.|.++..      ++||++||..+..+.+....|+++|++++.|+
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~  172 (287)
T PRK06194         93 VGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLT  172 (287)
T ss_pred             CCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcchHHHHHHHHHHH
Confidence            987777888899999999999999999999999999976653      79999999999999899999999999999999


Q ss_pred             HHHHHHhccC
Q 042185          150 DTLRLELGHF  159 (162)
Q Consensus       150 ~~l~~e~~~~  159 (162)
                      ++++.+++..
T Consensus       173 ~~l~~e~~~~  182 (287)
T PRK06194        173 ETLYQDLSLV  182 (287)
T ss_pred             HHHHHHHhhc
Confidence            9999998753

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.4e-30  Score=184.31  Aligned_cols=158  Identities=29%  Similarity=0.410  Sum_probs=142.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC--
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC--   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~--   78 (162)
                      ||++|||++++++|+++|++|++++|+.+..    ....+.++.+|++|.++++.+++++.+.++++|++|||+|...  
T Consensus        16 Gas~gIG~~ia~~l~~~G~~v~~~~r~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~   91 (260)
T PRK06523         16 GGTKGIGAATVARLLEAGARVVTTARSRPDD----LPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAP   91 (260)
T ss_pred             CCCCchhHHHHHHHHHCCCEEEEEeCChhhh----cCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccC
Confidence            8999999999999999999999999986542    1245778999999999999999999999999999999999642  


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCC-CchhhhHhHHHHHHHHHHHHHHhc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGP-WAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                      ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+ ....|+++|+++++|+++++.+++
T Consensus        92 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~sK~a~~~l~~~~a~~~~  171 (260)
T PRK06523         92 AGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLSKEVA  171 (260)
T ss_pred             CCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHHHHHHHHHHHHHHHHHHh
Confidence            3567778999999999999999999999999999887778999999998888755 788999999999999999999999


Q ss_pred             cCCCC
Q 042185          158 HFGID  162 (162)
Q Consensus       158 ~~gi~  162 (162)
                      ++|||
T Consensus       172 ~~gi~  176 (260)
T PRK06523        172 PKGVR  176 (260)
T ss_pred             hcCcE
Confidence            99886

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.97  E-value=4.1e-30  Score=183.92  Aligned_cols=160  Identities=30%  Similarity=0.444  Sum_probs=139.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhH---Hhhhc-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATM---ADLEQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~---~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||++|||++++++|+++|++|++++|+....   +++.. ...+.++.+|++++++++.+++++.+.++++|++|||||.
T Consensus        15 Gas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~nAg~   94 (260)
T PRK12823         15 GAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRIDVLINNVGG   94 (260)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeEEEECCcc
Confidence            8999999999999999999999999985321   11211 3467789999999999999999999999999999999996


Q ss_pred             C-CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           77 Q-CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        77 ~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      . ...++.+.+.++|+..+++|+.+++.+++.++|.|++++.++||++||..+..  +....|+++|+++++|+++++.|
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~Y~~sK~a~~~~~~~la~e  172 (260)
T PRK12823         95 TIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG--INRVPYSAAKGGVNALTASLAFE  172 (260)
T ss_pred             ccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC--CCCCccHHHHHHHHHHHHHHHHH
Confidence            4 34678889999999999999999999999999999887778999999987653  34568999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      ++++|||
T Consensus       173 ~~~~gi~  179 (260)
T PRK12823        173 YAEHGIR  179 (260)
T ss_pred             hcccCcE
Confidence            9999885

>PRK12743 oxidoreductase; Provisional

Probab=99.97  E-value=3.6e-30  Score=183.97  Aligned_cols=162  Identities=31%  Similarity=0.434  Sum_probs=144.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEec-ChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGR-SKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r-~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||++++++|+++|++|+++++ +.+..+.+.+     ..++.++.+|+++.++++.+++++.+.++++|++|||+
T Consensus         9 Gas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~a   88 (256)
T PRK12743          9 ASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRIDVLVNNA   88 (256)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            89999999999999999999988865 4444433322     34688999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      |.....++.+.+.++|++.+++|+.+++.+++++.+.|.+++ .++||++||..+..+.++...|+++|+++.+++++++
T Consensus        89 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la  168 (256)
T PRK12743         89 GAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMA  168 (256)
T ss_pred             CCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHHHHHHHHHHH
Confidence            987767778889999999999999999999999999986543 5899999999999999999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .++.++|||
T Consensus       169 ~~~~~~~i~  177 (256)
T PRK12743        169 LELVEHGIL  177 (256)
T ss_pred             HHhhhhCeE
Confidence            999998885

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.2e-30  Score=184.43  Aligned_cols=161  Identities=26%  Similarity=0.394  Sum_probs=144.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||.+++++|+++|++|++++|+.+.+++...     .....++.+|++++++++++++++.+.++++|++|||+|
T Consensus        16 GasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~vi~~ag   95 (264)
T PRK07576         16 GGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAA   95 (264)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            899999999999999999999999998776554322     245678899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....++.+.+.++|++.+++|+.+++.++++++|.|+++ +|+||++||..+..+.+....|+++|++++.|+++++.|
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~~~~~~~~~Y~asK~a~~~l~~~la~e  174 (264)
T PRK07576         96 GNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALE  174 (264)
T ss_pred             CCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhccCCCCccHHHHHHHHHHHHHHHHHHH
Confidence            7666778888999999999999999999999999998654 589999999988888889999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      +.++||+
T Consensus       175 ~~~~gi~  181 (264)
T PRK07576        175 WGPEGIR  181 (264)
T ss_pred             hhhcCeE
Confidence            9988875

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.8e-30  Score=185.11  Aligned_cols=162  Identities=28%  Similarity=0.492  Sum_probs=148.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||+|+||++++++|+++|++|++++|+.+.++++..  ..++.++.+|++|.++++++++++.+.++++|++|||+|...
T Consensus         9 Gasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~   88 (276)
T PRK06482          9 GASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGL   88 (276)
T ss_pred             cCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            899999999999999999999999999887766544  246888999999999999999999999999999999999887


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      .++..+.+.++++..+++|+.+++.+++.++|+|++++.++||++||..+..+.++...|+++|++++.|++.++.++++
T Consensus        89 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~  168 (276)
T PRK06482         89 FGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVAP  168 (276)
T ss_pred             CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHHHHHHHHHHhhc
Confidence            77788889999999999999999999999999998777789999999998888889999999999999999999999988


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +||+
T Consensus       169 ~gi~  172 (276)
T PRK06482        169 FGIE  172 (276)
T ss_pred             cCcE
Confidence            8874

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5e-30  Score=183.46  Aligned_cols=158  Identities=30%  Similarity=0.368  Sum_probs=142.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      |+++|||+++++.|+++|++|++++|+.+..++..+      ..++.++.+|++++++++.+++.    ++++|++|||+
T Consensus        14 G~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----~g~id~lv~~a   89 (259)
T PRK06125         14 GASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----AGDIDILVNNA   89 (259)
T ss_pred             CCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----hCCCCEEEECC
Confidence            889999999999999999999999999876665432      24578899999999999888754    48999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.++|+.++++|+.+++.++++++|.|++++.++||++||..+..+.+.+..|+++|+++.+|+++++.
T Consensus        90 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask~al~~~~~~la~  169 (259)
T PRK06125         90 GAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMAFTRALGG  169 (259)
T ss_pred             CCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHHHHHHHHHHHHHH
Confidence            98777788899999999999999999999999999999877778999999999988888889999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |+.++|||
T Consensus       170 e~~~~gi~  177 (259)
T PRK06125        170 KSLDDGVR  177 (259)
T ss_pred             HhCccCeE
Confidence            99999986

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.3e-30  Score=184.76  Aligned_cols=160  Identities=39%  Similarity=0.621  Sum_probs=146.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+||||++++++|+++|++|++++|+.+.++.+... ...++.+|+++.++++++++.+.+.++++|++|||+|....+
T Consensus         8 GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~   86 (274)
T PRK05693          8 GCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAA-GFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAGYGAMG   86 (274)
T ss_pred             cCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC-CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence            8999999999999999999999999998877665443 467889999999999999999999999999999999987777


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccCC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG  160 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~g  160 (162)
                      ++.+.+.++|+..+++|+.+++.+++.++|.|++ ..++||++||..+..+.+....|+++|++++.|+++++.|++++|
T Consensus        87 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~l~~e~~~~g  165 (274)
T PRK05693         87 PLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRR-SRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFG  165 (274)
T ss_pred             CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh-cCCEEEEECCccccCCCCCccHHHHHHHHHHHHHHHHHHHhhhhC
Confidence            8888899999999999999999999999999864 358999999999998888999999999999999999999999988


Q ss_pred             CC
Q 042185          161 ID  162 (162)
Q Consensus       161 i~  162 (162)
                      |+
T Consensus       166 i~  167 (274)
T PRK05693        166 VQ  167 (274)
T ss_pred             eE
Confidence            75

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.97  E-value=9.4e-32  Score=182.28  Aligned_cols=154  Identities=28%  Similarity=0.399  Sum_probs=134.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHH---hh---hcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMA---DL---EQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~---~~---~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      |+.||||++++++|+++|..+.+++-+.|..+   ++   .+..++.+++||+++..++++.++++..++|.+|++||+|
T Consensus        12 ggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~iDIlINgA   91 (261)
T KOG4169|consen   12 GGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTIDILINGA   91 (261)
T ss_pred             cCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCceEEEEccc
Confidence            78999999999999999997766655544332   22   3347899999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC---CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK---KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDT  151 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~  151 (162)
                      |+..        .++|++.+.+|+.|.+.-+...+|+|.+++   +|-||++||..|+.|+|..+.|++||+++.+|+|+
T Consensus        92 Gi~~--------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsKaGVvgFTRS  163 (261)
T KOG4169|consen   92 GILD--------DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASKAGVVGFTRS  163 (261)
T ss_pred             cccc--------chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcccceeeeehh
Confidence            9853        467999999999999999999999998765   68899999999999999999999999999999999


Q ss_pred             HHHH--hccCCCC
Q 042185          152 LRLE--LGHFGID  162 (162)
Q Consensus       152 l~~e--~~~~gi~  162 (162)
                      ++..  |.+.|||
T Consensus       164 la~~ayy~~sGV~  176 (261)
T KOG4169|consen  164 LADLAYYQRSGVR  176 (261)
T ss_pred             hhhhhhHhhcCEE
Confidence            9876  4555654

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.97  E-value=5.5e-30  Score=183.46  Aligned_cols=162  Identities=30%  Similarity=0.448  Sum_probs=144.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh-hhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK-ATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~-~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|+++.|+. +..+...+     ..++.++.+|+++.++++++++.+.+.++++|++|||+
T Consensus        14 Ga~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~a   93 (261)
T PRK08936         14 GGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGTLDVMINNA   93 (261)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            8999999999999999999999988854 33332221     34677899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      |...+.++.+.+.++|++.+++|+.+++.+++.+++.|.+++ .++||++||..+..+.+....|+++|+|+.+|+++++
T Consensus        94 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la  173 (261)
T PRK08936         94 GIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLA  173 (261)
T ss_pred             CCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHHHHHHHHHHHHHH
Confidence            987777888899999999999999999999999999997654 6899999999999999999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|+.+.|||
T Consensus       174 ~e~~~~gi~  182 (261)
T PRK08936        174 MEYAPKGIR  182 (261)
T ss_pred             HHHhhcCeE
Confidence            999998875

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.97  E-value=8.5e-30  Score=181.26  Aligned_cols=162  Identities=29%  Similarity=0.502  Sum_probs=147.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||+|+||.+++++|+++|++|++++|+.+.++++..  ...+.++.+|+++.++++.+++++.+.++++|++||++|...
T Consensus         7 Gasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   86 (248)
T PRK10538          7 GATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLAL   86 (248)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccC
Confidence            899999999999999999999999999887766543  246788999999999999999999999999999999999753


Q ss_pred             -CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhc
Q 042185           79 -VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus        79 -~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                       ..++.+.+.++|+.++++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|+++++|++.++.++.
T Consensus        87 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~  166 (248)
T PRK10538         87 GLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLH  166 (248)
T ss_pred             CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHHHHHHHHHHhc
Confidence             3567788999999999999999999999999999877778999999999888888899999999999999999999999


Q ss_pred             cCCCC
Q 042185          158 HFGID  162 (162)
Q Consensus       158 ~~gi~  162 (162)
                      +.|||
T Consensus       167 ~~~i~  171 (248)
T PRK10538        167 GTAVR  171 (248)
T ss_pred             CCCcE
Confidence            98885

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.3e-30  Score=181.97  Aligned_cols=162  Identities=34%  Similarity=0.471  Sum_probs=148.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|+||++++++|+++|++|++++|+.+..+++..     ..++.++.+|++++++++++++++.++++++|++|||+|
T Consensus        13 G~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag   92 (241)
T PRK07454         13 GASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPDVLINNAG   92 (241)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            899999999999999999999999999876655432     256888999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....++.+.+.++++..+++|+.+++.+++.+.+.|.+++.++||++||..+..+.++...|+++|++++.++++++.+
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~~~a~e  172 (241)
T PRK07454         93 MAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEE  172 (241)
T ss_pred             ccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHHHHHHHHHHHH
Confidence            87777778889999999999999999999999999998777799999999999888889999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      +++.||+
T Consensus       173 ~~~~gi~  179 (241)
T PRK07454        173 ERSHGIR  179 (241)
T ss_pred             hhhhCCE
Confidence            9988875

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.1e-30  Score=182.71  Aligned_cols=161  Identities=30%  Similarity=0.458  Sum_probs=145.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||++++++|+++|++|++++|+.+..+++..     ..++.++.+|++++++++.+++++.+.++++|++|||+|
T Consensus        12 Ga~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~vi~~ag   91 (258)
T PRK07890         12 GVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVDALVNNAF   91 (258)
T ss_pred             CCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCccEEEECCc
Confidence            899999999999999999999999999876655432     346789999999999999999999999999999999999


Q ss_pred             CCCC-CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           76 VQCV-GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        76 ~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      .... .++.+.+.++|+..+++|+.+++.+++++.+.|.+. +++||++||..+..+.++...|+++|++++.+++.++.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~l~~~~a~  170 (258)
T PRK07890         92 RVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES-GGSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLAT  170 (258)
T ss_pred             cCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCEEEEEechhhccCCCCcchhHHHHHHHHHHHHHHHH
Confidence            7533 567788999999999999999999999999998654 47999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       171 ~~~~~~i~  178 (258)
T PRK07890        171 ELGPQGIR  178 (258)
T ss_pred             HHhhcCcE
Confidence            99988875

>PRK06128 oxidoreductase; Provisional

Probab=99.97  E-value=6.5e-30  Score=186.53  Aligned_cols=160  Identities=28%  Similarity=0.443  Sum_probs=141.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh--hHHhh----hc-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA--TMADL----EQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~--~~~~~----~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||++|||+++++.|+++|++|++++++.+  ..++.    .. ..++.++.+|+++.++++++++++.+.++++|++|||
T Consensus        62 Gas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lV~n  141 (300)
T PRK06128         62 GADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGGLDILVNI  141 (300)
T ss_pred             cCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            89999999999999999999999887532  22222    11 3467889999999999999999999999999999999


Q ss_pred             CCCC-CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHH
Q 042185           74 AGVQ-CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTL  152 (162)
Q Consensus        74 ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l  152 (162)
                      ||.. ...++.+.+.++|+..+++|+.+++.++++++|.|++  +++||++||..++.+.+....|+++|+++++|++++
T Consensus       142 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~~~~l  219 (300)
T PRK06128        142 AGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQPSPTLLDYASTKAAIVAFTKAL  219 (300)
T ss_pred             CcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCccccCCCCCchhHHHHHHHHHHHHHHH
Confidence            9975 3456888999999999999999999999999999853  479999999999999999999999999999999999


Q ss_pred             HHHhccCCCC
Q 042185          153 RLELGHFGID  162 (162)
Q Consensus       153 ~~e~~~~gi~  162 (162)
                      +.++.++|||
T Consensus       220 a~el~~~gI~  229 (300)
T PRK06128        220 AKQVAEKGIR  229 (300)
T ss_pred             HHHhhhcCcE
Confidence            9999999986

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.97  E-value=8.3e-30  Score=182.62  Aligned_cols=162  Identities=31%  Similarity=0.417  Sum_probs=144.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHh---hh-cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMAD---LE-QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~---~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||++|||++++++|+++|++|++++|+.+..+.   .. ...++.++.+|+++.++++.+++++.++++++|++|||+|.
T Consensus        13 G~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~vi~~ag~   92 (263)
T PRK08226         13 GALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGV   92 (263)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence            899999999999999999999999998753221   11 13567889999999999999999999999999999999998


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccc-cCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTV-AAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~-~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      ....++.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+ ..+.+....|+++|+++++++++++.+
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~  172 (263)
T PRK08226         93 CRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVE  172 (263)
T ss_pred             CCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHHHHHHHHHHHHHHH
Confidence            7777888889999999999999999999999999997777789999999877 456677889999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      ++++|||
T Consensus       173 ~~~~~i~  179 (263)
T PRK08226        173 YAQSGIR  179 (263)
T ss_pred             hcccCcE
Confidence            9988875

>PRK06484 short chain dehydrogenase; Validated

Probab=99.97  E-value=4e-30  Score=200.01  Aligned_cols=162  Identities=30%  Similarity=0.408  Sum_probs=147.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC--CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||+++++.|+++|++|++++|+.+.++++..+  ....++.+|++++++++.+++++.++++++|++|||+|...
T Consensus        12 Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~li~nag~~~   91 (520)
T PRK06484         12 GAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTD   91 (520)
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCcCC
Confidence            8999999999999999999999999998877766543  45678999999999999999999999999999999999742


Q ss_pred             --CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCC-eEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           79 --VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG-KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        79 --~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                        ..++.+.+.++|++++++|+.+++.++++++|.|++++.| +||++||..+..+.+....|+++|+++.+|+++++.|
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e  171 (520)
T PRK06484         92 PTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACE  171 (520)
T ss_pred             CCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence              3567788999999999999999999999999999776554 9999999999999999999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      +.+.|||
T Consensus       172 ~~~~~i~  178 (520)
T PRK06484        172 WAAKGIR  178 (520)
T ss_pred             hhhhCeE
Confidence            9998875

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=8e-30  Score=181.34  Aligned_cols=162  Identities=28%  Similarity=0.321  Sum_probs=145.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEE-EecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVA-TGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~-~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+|+||++++++|+++|++|++ .+|+.+..+++.+     ...+.++.+|++|+++++.+++++.+.++++|++|||+
T Consensus        11 Ga~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~a   90 (250)
T PRK08063         11 GSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNA   90 (250)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            89999999999999999999876 5787765544322     35678899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.++|+..+++|+.+++.+++++.+.|++++.++||++||..+..+.+....|+++|+++++|+++++.
T Consensus        91 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~~~  170 (250)
T PRK08063         91 ASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALEALTRYLAV  170 (250)
T ss_pred             CCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHHHHHHHHHHHHH
Confidence            98777788889999999999999999999999999999887889999999998888888889999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      ++.+.|||
T Consensus       171 ~~~~~~i~  178 (250)
T PRK08063        171 ELAPKGIA  178 (250)
T ss_pred             HHhHhCeE
Confidence            99888875

>PRK05717 oxidoreductase; Validated

Probab=99.97  E-value=8.6e-30  Score=181.88  Aligned_cols=160  Identities=28%  Similarity=0.412  Sum_probs=142.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||+++||+++|++|+++|++|++++|+.+..++...  ...+.++.+|+++.++++.+++++.++++++|++|||+|...
T Consensus        17 G~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~   96 (255)
T PRK05717         17 GAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAAIAD   96 (255)
T ss_pred             CCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCccc
Confidence            899999999999999999999999998766555433  246788999999999999999999999999999999999864


Q ss_pred             C--CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHh
Q 042185           79 V--GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus        79 ~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                      .  .++.+.+.++|+..+++|+.+++.+++++.|.|.++ .++||++||..+..+.+....|+++|++++.+++.++.++
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~  175 (255)
T PRK05717         97 PHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISL  175 (255)
T ss_pred             CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhhcCCCCCCcchHHHHHHHHHHHHHHHHHh
Confidence            3  467778999999999999999999999999998654 4899999999999998899999999999999999999998


Q ss_pred             ccCCCC
Q 042185          157 GHFGID  162 (162)
Q Consensus       157 ~~~gi~  162 (162)
                      ++. ||
T Consensus       176 ~~~-i~  180 (255)
T PRK05717        176 GPE-IR  180 (255)
T ss_pred             cCC-CE
Confidence            753 53

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.3e-30  Score=183.34  Aligned_cols=162  Identities=27%  Similarity=0.470  Sum_probs=145.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC------CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|++++|+.+.+++..++      ....++.+|++++++++.+++++.+.++++|++|||+
T Consensus         7 Gas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~a   86 (272)
T PRK07832          7 GAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDVVMNIA   86 (272)
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            8999999999999999999999999998765544321      2245678999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-CCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      |.....++.+.+.++|+..+++|+.+++.+++.++|.|.++ +.++||++||..+..+.+....|+++|+++.+|+++++
T Consensus        87 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~  166 (272)
T PRK07832         87 GISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLR  166 (272)
T ss_pred             CCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHHHHHHHHH
Confidence            98777788899999999999999999999999999999764 35899999999988888899999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|+.++||+
T Consensus       167 ~e~~~~~i~  175 (272)
T PRK07832        167 FDLARHGIG  175 (272)
T ss_pred             HHhhhcCcE
Confidence            999988875

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.97  E-value=8.4e-30  Score=181.37  Aligned_cols=162  Identities=31%  Similarity=0.447  Sum_probs=148.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|+||.+++++|+++|++|++++|+.+..++..+    +.++.++.+|++|+++++++++++.++++++|++|||+|.
T Consensus        12 G~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~vi~~ag~   91 (252)
T PRK06138         12 GAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGF   91 (252)
T ss_pred             CCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            899999999999999999999999999776554433    3467899999999999999999999999999999999998


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHh
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                      ....++.+.+.++++..+++|+.+++.+.+.+++.|++.+.++|+++||..+..+.+....|+.+|++++.+++.++.|+
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~  171 (252)
T PRK06138         92 GCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDH  171 (252)
T ss_pred             CCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence            77777788899999999999999999999999999988778899999999998888889999999999999999999999


Q ss_pred             ccCCCC
Q 042185          157 GHFGID  162 (162)
Q Consensus       157 ~~~gi~  162 (162)
                      ...|||
T Consensus       172 ~~~~i~  177 (252)
T PRK06138        172 ATDGIR  177 (252)
T ss_pred             HhcCeE
Confidence            888875

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.97  E-value=9.5e-30  Score=181.82  Aligned_cols=162  Identities=20%  Similarity=0.249  Sum_probs=139.3

Q ss_pred             CCCCchHHHHHHHHHH----CCCeEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcCCc--
Q 042185            1 CSQGGIGHALARAFAA----SDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKI--   67 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~----~g~~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i--   67 (162)
                      ||++|||+++|++|++    +|++|++++|+.+.++++.+       ...+.++.+|+++.++++.+++++.+.++.+  
T Consensus         7 Gas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~~~~   86 (256)
T TIGR01500         7 GASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELPRPKGL   86 (256)
T ss_pred             cCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhccccCCC
Confidence            8999999999999997    79999999999877665432       2367889999999999999999998877653  


Q ss_pred             --cEEEECCCCCCCC--CCCCC-ChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC--CCeEEEeccccccCCCCCchhhhH
Q 042185           68 --DVLVNNAGVQCVG--PLAEV-PLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK--KGKIINVGSVTVAAPGPWAGTYTA  140 (162)
Q Consensus        68 --d~vi~~ag~~~~~--~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~y~~  140 (162)
                        |++|||||.....  ...+. +.++|+..+++|+.+++.+++.++|.|++++  .++||++||..+..+.+....|++
T Consensus        87 ~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~~~Y~a  166 (256)
T TIGR01500        87 QRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGWALYCA  166 (256)
T ss_pred             ceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCchHHHH
Confidence              6899999975332  23323 5789999999999999999999999997653  479999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCCC
Q 042185          141 SKAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       141 sKaa~~~l~~~l~~e~~~~gi~  162 (162)
                      +|+++++|+++++.|+++.|||
T Consensus       167 sKaal~~l~~~la~e~~~~~i~  188 (256)
T TIGR01500       167 GKAARDMLFQVLALEEKNPNVR  188 (256)
T ss_pred             HHHHHHHHHHHHHHHhcCCCeE
Confidence            9999999999999999999885

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.97  E-value=1.4e-30  Score=184.41  Aligned_cols=160  Identities=27%  Similarity=0.407  Sum_probs=141.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC------CceeEEEeccCChHH-HHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------PRFFVQELDVLSEQS-VQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~------~~~~~~~~D~~~~~~-i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||++|||++.+++||++|.+|++++|++++++.++.+      ..+.++.+|+++.+. .+++.+.+.  ..++-++|||
T Consensus        56 GaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~--~~~VgILVNN  133 (312)
T KOG1014|consen   56 GATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLA--GLDVGILVNN  133 (312)
T ss_pred             CCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhc--CCceEEEEec
Confidence            8999999999999999999999999999999877553      568899999999876 333333332  1366779999


Q ss_pred             CCCCC--CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHH
Q 042185           74 AGVQC--VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDT  151 (162)
Q Consensus        74 ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~  151 (162)
                      +|...  +..+.+.+.+.+++.+.+|..+...+++.++|.|.++++|-||+++|.++..|+|.++.|+++|++++.|+++
T Consensus       134 vG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~~v~~~S~~  213 (312)
T KOG1014|consen  134 VGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKAFVDFFSRC  213 (312)
T ss_pred             ccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHHHHHHHHHH
Confidence            99876  5678888888999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhccCCCC
Q 042185          152 LRLELGHFGID  162 (162)
Q Consensus       152 l~~e~~~~gi~  162 (162)
                      |+.|++.+||.
T Consensus       214 L~~Ey~~~gI~  224 (312)
T KOG1014|consen  214 LQKEYESKGIF  224 (312)
T ss_pred             HHHHHHhcCeE
Confidence            99999999983

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.5e-29  Score=181.50  Aligned_cols=161  Identities=27%  Similarity=0.398  Sum_probs=145.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+||||.+++++|+++|++|++++|+.+..+++..     ...+.++.+|+++++++.++++++.+.++++|++||+||
T Consensus        17 GasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag   96 (263)
T PRK07814         17 GAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRLDIVVNNVG   96 (263)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            899999999999999999999999999876655432     246788999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhh-cCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY-RKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      .....++.+.+.++++.++++|+.+++.+.+++.+.|.+ ++.+++|++||..+..+.++...|+++|+++++++++++.
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~  176 (263)
T PRK07814         97 GTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAAL  176 (263)
T ss_pred             CCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHHHHHHHHHHHHHH
Confidence            876677788899999999999999999999999999976 4678999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |+.+ +||
T Consensus       177 e~~~-~i~  183 (263)
T PRK07814        177 DLCP-RIR  183 (263)
T ss_pred             HHCC-Cce
Confidence            9876 353

>PRK07069 short chain dehydrogenase; Validated

Probab=99.97  E-value=1.3e-29  Score=180.26  Aligned_cols=160  Identities=29%  Similarity=0.411  Sum_probs=143.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecC-hhhHHhhhcC-------CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRS-KATMADLEQD-------PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~-~~~~~~~~~~-------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      ||++|||++++++|+++|++|++++|+ .+.+++..++       .....+.+|+++.++++.+++++.++++++|++||
T Consensus         6 G~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   85 (251)
T PRK07069          6 GAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLSVLVN   85 (251)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCccEEEE
Confidence            899999999999999999999999998 5544433221       23456789999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHH
Q 042185           73 NAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTL  152 (162)
Q Consensus        73 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l  152 (162)
                      |+|.....++.+.+.+++++++++|+.+++.+++.++|.|++.+.++||++||..+..+.+....|+++|++++.|++++
T Consensus        86 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~l  165 (251)
T PRK07069         86 NAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSI  165 (251)
T ss_pred             CCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHHHHHHHH
Confidence            99987777888899999999999999999999999999998877789999999999999999999999999999999999


Q ss_pred             HHHhccCC
Q 042185          153 RLELGHFG  160 (162)
Q Consensus       153 ~~e~~~~g  160 (162)
                      +.|+++++
T Consensus       166 a~e~~~~~  173 (251)
T PRK07069        166 ALDCARRG  173 (251)
T ss_pred             HHHhcccC
Confidence            99998765

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=1.8e-29  Score=178.57  Aligned_cols=162  Identities=27%  Similarity=0.419  Sum_probs=147.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|+||++++++|+++|++|++++|+.+..++..+     ..++.++.+|++++++++.+++++.++++++|++|||+|
T Consensus        14 G~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag   93 (239)
T PRK07666         14 GAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSIDILINNAG   93 (239)
T ss_pred             cCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCccEEEEcCc
Confidence            899999999999999999999999999776554322     246788999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....++.+.+.++|++.+++|+.+++.+++.+.+.+.+++.+++|++||..+..+.++...|+.+|+++..+++.++.|
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e  173 (239)
T PRK07666         94 ISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQE  173 (239)
T ss_pred             cccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHHHHHHHHHHHHHHH
Confidence            87667777889999999999999999999999999998877889999999999999999999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      +++.||+
T Consensus       174 ~~~~gi~  180 (239)
T PRK07666        174 VRKHNIR  180 (239)
T ss_pred             hhccCcE
Confidence            9998875

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.5e-29  Score=180.65  Aligned_cols=162  Identities=26%  Similarity=0.351  Sum_probs=143.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC-
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV-   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~-   79 (162)
                      ||+||||.+++++|+++|++|++++|+.+..++..++....++.+|++++++++++++++.+.++++|++|||+|...+ 
T Consensus        14 GasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~   93 (255)
T PRK06057         14 GGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPE   93 (255)
T ss_pred             CCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCC
Confidence            8999999999999999999999999998776655444344688999999999999999999999999999999997532 


Q ss_pred             -CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC-CCchhhhHhHHHHHHHHHHHHHHhc
Q 042185           80 -GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG-PWAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus        80 -~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-~~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                       .++.+.+.+.|+..+++|+.+++.+++.++|.|++++.++||++||..+..+. ++...|+++|+++..+++.++.++.
T Consensus        94 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~sKaal~~~~~~l~~~~~  173 (255)
T PRK06057         94 DDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFA  173 (255)
T ss_pred             CCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence             45667889999999999999999999999999987778899999998776665 3677899999999999999999999


Q ss_pred             cCCCC
Q 042185          158 HFGID  162 (162)
Q Consensus       158 ~~gi~  162 (162)
                      ++||+
T Consensus       174 ~~gi~  178 (255)
T PRK06057        174 RQGIR  178 (255)
T ss_pred             hhCcE
Confidence            88875

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=1.7e-31  Score=174.47  Aligned_cols=158  Identities=32%  Similarity=0.398  Sum_probs=142.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCC--ceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDP--RFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      |+.-|||+++|+.|++.|+.|+.+.|+++.+..+..+.  -+..+.+|+++++.+++.+..+    +++|.++||||+..
T Consensus        14 gagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v----~pidgLVNNAgvA~   89 (245)
T KOG1207|consen   14 GAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPV----FPIDGLVNNAGVAT   89 (245)
T ss_pred             cccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhccc----Cchhhhhccchhhh
Confidence            67889999999999999999999999999998876653  3788999999998887776665    69999999999998


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHh-hcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMA-YRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                      ..+|.+++.++|++.|.+|+.+++.+.|....-+. ++.+|.||++||.++..+..+...|+++|+|+++++|+|+.|++
T Consensus        90 ~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKaALDmlTk~lAlELG  169 (245)
T KOG1207|consen   90 NHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKAALDMLTKCLALELG  169 (245)
T ss_pred             cchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHHHHHHHHHHHHHhhC
Confidence            89999999999999999999999999998655443 45578999999999999999999999999999999999999999


Q ss_pred             cCCCC
Q 042185          158 HFGID  162 (162)
Q Consensus       158 ~~gi~  162 (162)
                      +++||
T Consensus       170 p~kIR  174 (245)
T KOG1207|consen  170 PQKIR  174 (245)
T ss_pred             cceeE
Confidence            99987

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3e-29  Score=178.26  Aligned_cols=162  Identities=26%  Similarity=0.353  Sum_probs=146.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||++|||++++++|+++|++|++++|+.+..+++..       ...+.++.+|+++.++++++++++.++++++|++|||
T Consensus         9 Gas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~   88 (248)
T PRK08251          9 GASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGLDRVIVN   88 (248)
T ss_pred             CCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            899999999999999999999999999876655432       3468899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCC-chhhhHhHHHHHHHHHHH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPW-AGTYTASKAALHSLTDTL  152 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-~~~y~~sKaa~~~l~~~l  152 (162)
                      +|+....++.+.+.+.+++.+++|+.+++.+++.++|.|++.+.++||++||..+..+.+. ...|+.+|++++++++.+
T Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~l  168 (248)
T PRK08251         89 AGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAGVASLGEGL  168 (248)
T ss_pred             CCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHHHHHHHHHHH
Confidence            9998777777888999999999999999999999999998877889999999988887774 688999999999999999


Q ss_pred             HHHhccCCCC
Q 042185          153 RLELGHFGID  162 (162)
Q Consensus       153 ~~e~~~~gi~  162 (162)
                      +.++...||+
T Consensus       169 ~~~~~~~~i~  178 (248)
T PRK08251        169 RAELAKTPIK  178 (248)
T ss_pred             HHHhcccCcE
Confidence            9999877764

>PLN00015 protochlorophyllide reductase

Probab=99.97  E-value=1.6e-29  Score=185.11  Aligned_cols=162  Identities=24%  Similarity=0.253  Sum_probs=138.1

Q ss_pred             CCCCchHHHHHHHHHHCC-CeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASD-CRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g-~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||++++++|+++| ++|++++|+.+..+++..     ...+.++.+|++|.++++.+++++.+.++++|++||||
T Consensus         4 Gas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lInnA   83 (308)
T PLN00015          4 GASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLVCNA   83 (308)
T ss_pred             CCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEEECC
Confidence            899999999999999999 999999999876654432     23577889999999999999999998889999999999


Q ss_pred             CCCCC-CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC--CCeEEEeccccccCC--------------------
Q 042185           75 GVQCV-GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK--KGKIINVGSVTVAAP--------------------  131 (162)
Q Consensus        75 g~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~isS~~~~~~--------------------  131 (162)
                      |+... .++.+.+.++|++++++|+.+++.+++.++|.|++++  +|+||++||..+..+                    
T Consensus        84 G~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (308)
T PLN00015         84 AVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAG  163 (308)
T ss_pred             CcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhhhhc
Confidence            98533 3566789999999999999999999999999998765  689999999876421                    


Q ss_pred             ---------------CCCchhhhHhHHHHHHHHHHHHHHhcc-CCCC
Q 042185          132 ---------------GPWAGTYTASKAALHSLTDTLRLELGH-FGID  162 (162)
Q Consensus       132 ---------------~~~~~~y~~sKaa~~~l~~~l~~e~~~-~gi~  162 (162)
                                     .++...|++||+|...+++.+++++.+ .||+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~  210 (308)
T PLN00015        164 GLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGIT  210 (308)
T ss_pred             ccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeE
Confidence                           124567999999988889999999975 5764

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.6e-29  Score=179.62  Aligned_cols=160  Identities=35%  Similarity=0.458  Sum_probs=144.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||+|+||++++++|+++|++|++++|+.+.+++..+  ..++.++.+|+++.+++..+++.+.+.++++|++|||+|...
T Consensus        13 Gasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~   92 (249)
T PRK06500         13 GGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGVAK   92 (249)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence            899999999999999999999999999776665543  346778999999999999999999999999999999999877


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ..++.+.+.++|+..+++|+.+++.+++++.|.|+.  .+++|+++|..+..+.+....|+++|+++++++++++.|+++
T Consensus        93 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~  170 (249)
T PRK06500         93 FAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN--PASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTLSGELLP  170 (249)
T ss_pred             CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEechHhccCCCCccHHHHHHHHHHHHHHHHHHHhhh
Confidence            677788899999999999999999999999998853  478999999888888889999999999999999999999988


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +||+
T Consensus       171 ~gi~  174 (249)
T PRK06500        171 RGIR  174 (249)
T ss_pred             cCeE
Confidence            8874

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-29  Score=181.11  Aligned_cols=161  Identities=34%  Similarity=0.486  Sum_probs=147.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|+||.+++++|+++|++|++++|+.+.+++...    ..++.++.+|++|.++++.+++.+.+ ++++|++|||+|.
T Consensus        12 G~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~id~lv~~ag~   90 (263)
T PRK09072         12 GASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE-MGGINVLINNAGV   90 (263)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh-cCCCCEEEECCCC
Confidence            899999999999999999999999999877665533    34788999999999999999999876 7899999999998


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHh
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                      ....++.+.+.++++..+++|+.+++.+++.++|.|.+++.+.+|++||..+..+.++...|+++|+++.+++++++.++
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~  170 (263)
T PRK09072         91 NHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRREL  170 (263)
T ss_pred             CCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHHHHHHHHHHHHHh
Confidence            77777888999999999999999999999999999988777899999999998888899999999999999999999999


Q ss_pred             ccCCCC
Q 042185          157 GHFGID  162 (162)
Q Consensus       157 ~~~gi~  162 (162)
                      .+.||+
T Consensus       171 ~~~~i~  176 (263)
T PRK09072        171 ADTGVR  176 (263)
T ss_pred             cccCcE
Confidence            998875

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.5e-30  Score=178.48  Aligned_cols=152  Identities=21%  Similarity=0.236  Sum_probs=130.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC-
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV-   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~-   79 (162)
                      ||++|||+++++.|+++|++|++++|+.++++++.++....++.+|++++++++++++++.+   ++|++|||+|.... 
T Consensus         7 Gas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~---~id~lv~~ag~~~~~   83 (223)
T PRK05884          7 GGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPH---HLDTIVNVPAPSWDA   83 (223)
T ss_pred             eCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhh---cCcEEEECCCccccC
Confidence            89999999999999999999999999988887766555677889999999999999887753   69999999985321 


Q ss_pred             -----CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           80 -----GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        80 -----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                           .++.+ +.++|++++++|+.+++.++++++|.|++  +|+||++||..    .+....|+++|+|+.+|+++++.
T Consensus        84 ~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~----~~~~~~Y~asKaal~~~~~~la~  156 (223)
T PRK05884         84 GDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPEN----PPAGSAEAAIKAALSNWTAGQAA  156 (223)
T ss_pred             CCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCC----CCCccccHHHHHHHHHHHHHHHH
Confidence                 12333 57899999999999999999999999953  48999999865    35568899999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       157 e~~~~gI~  164 (223)
T PRK05884        157 VFGTRGIT  164 (223)
T ss_pred             HhhhcCeE
Confidence            99999986

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.97  E-value=2.8e-29  Score=178.74  Aligned_cols=158  Identities=34%  Similarity=0.492  Sum_probs=145.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+++||.+++++|+++|++|++++|+.  ..  .....+.++++|++++++++++++++.++++++|++|||+|.....
T Consensus        15 Gas~~iG~~la~~l~~~G~~v~~~~~~~--~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~   90 (252)
T PRK08220         15 GAAQGIGYAVALAFVEAGAKVIGFDQAF--LT--QEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMG   90 (252)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEecch--hh--hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCC
Confidence            8999999999999999999999999986  11  1245688899999999999999999999999999999999987777


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccCC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG  160 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~g  160 (162)
                      ++.+.+.++|++.+++|+.+++.+++++.+.|++++.++||++||..+..+.++...|+++|++++.|+++++.|++++|
T Consensus        91 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~  170 (252)
T PRK08220         91 ATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCVGLELAPYG  170 (252)
T ss_pred             CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHHHHHHHHHHHHHHHhhHhC
Confidence            88888999999999999999999999999999887788999999999888888899999999999999999999999988


Q ss_pred             CC
Q 042185          161 ID  162 (162)
Q Consensus       161 i~  162 (162)
                      ||
T Consensus       171 i~  172 (252)
T PRK08220        171 VR  172 (252)
T ss_pred             eE
Confidence            75

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.97  E-value=2.7e-29  Score=178.28  Aligned_cols=162  Identities=26%  Similarity=0.348  Sum_probs=143.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEE-ecChhhHHh----hhc-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVAT-GRSKATMAD----LEQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~-~r~~~~~~~----~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+++||++++++|+++|++|++. +++.+..++    +.. ..++.++.+|++|.++++++++++.+.++++|++|||+
T Consensus        10 G~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~a   89 (246)
T PRK12938         10 GGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEIDVLVNNA   89 (246)
T ss_pred             CCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence            899999999999999999998875 444433322    221 34677889999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|+++|++++.|+++++.
T Consensus        90 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~  169 (246)
T PRK12938         90 GITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQ  169 (246)
T ss_pred             CCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHHHHHHHHHHHHH
Confidence            98766778889999999999999999999999999999877778999999999988889999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      ++.+.||+
T Consensus       170 ~~~~~gi~  177 (246)
T PRK12938        170 EVATKGVT  177 (246)
T ss_pred             HhhhhCeE
Confidence            99988874

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.3e-29  Score=180.90  Aligned_cols=161  Identities=19%  Similarity=0.160  Sum_probs=136.7

Q ss_pred             CCCCchHHHHHHHHHHCC-CeEEEEecChhh-HHhhh----c--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            1 CSQGGIGHALARAFAASD-CRVVATGRSKAT-MADLE----Q--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g-~~vi~~~r~~~~-~~~~~----~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      ||++|||+++|++|+++| ++|++++|+.+. ++++.    .  ..++.++.+|++|.++++++++++.+ ++++|++|+
T Consensus        15 Gas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~g~id~li~   93 (253)
T PRK07904         15 GGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-GGDVDVAIV   93 (253)
T ss_pred             cCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-cCCCCEEEE
Confidence            899999999999999995 899999998765 44332    2  13678999999999999999999876 589999999


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHH
Q 042185           73 NAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTL  152 (162)
Q Consensus        73 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l  152 (162)
                      |+|......-...+.+..++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+....|++||+++.+|++++
T Consensus        94 ~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKaa~~~~~~~l  173 (253)
T PRK07904         94 AFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKAGLDGFYLGL  173 (253)
T ss_pred             eeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHHHHHHHHHHH
Confidence            99985432222224455667899999999999999999999888899999999988888888889999999999999999


Q ss_pred             HHHhccCCCC
Q 042185          153 RLELGHFGID  162 (162)
Q Consensus       153 ~~e~~~~gi~  162 (162)
                      +.|+.++||+
T Consensus       174 ~~el~~~~i~  183 (253)
T PRK07904        174 GEALREYGVR  183 (253)
T ss_pred             HHHHhhcCCE
Confidence            9999999885

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=2.2e-29  Score=179.08  Aligned_cols=162  Identities=38%  Similarity=0.538  Sum_probs=147.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|+||.+++++|+++|++|++++|+.+..+++..    ...+.++.+|+++.++++.+++++.++++++|++||++|.
T Consensus        12 Gasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~   91 (251)
T PRK07231         12 GASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVDILVNNAGT   91 (251)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence            899999999999999999999999999876655433    2457899999999999999999999999999999999997


Q ss_pred             CC-CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           77 QC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        77 ~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .. ..++.+.+.++|+..+++|+.+++.+++.+++.|.+++.++||++||..+..+.++...|+.+|++++.+++.++.+
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~~~~~~~~~~a~~  171 (251)
T PRK07231         92 THRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAE  171 (251)
T ss_pred             CCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence            53 45677889999999999999999999999999998777899999999999999999999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      +++.|||
T Consensus       172 ~~~~~i~  178 (251)
T PRK07231        172 LGPDKIR  178 (251)
T ss_pred             hhhhCeE
Confidence            9988875

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.97  E-value=2.9e-29  Score=177.87  Aligned_cols=162  Identities=24%  Similarity=0.362  Sum_probs=147.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||+|+||++++++|+++|+.|++.+|+.+.+++...  ..++.++.+|+++.++++.+++++.+.++++|++|||+|...
T Consensus        13 Ga~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~   92 (245)
T PRK12936         13 GASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDILVNNAGITK   92 (245)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            899999999999999999999999998877765533  346788899999999999999999999999999999999877


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ..++.+.+.++|+..+++|+.+++.+++++.+.+.+++.++||++||..+..+.+....|+++|+++.++++.++.++.+
T Consensus        93 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~a~~~~~~~la~~~~~  172 (245)
T PRK12936         93 DGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIAT  172 (245)
T ss_pred             CCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHHHHHHHHHHHHHHhhH
Confidence            77778888999999999999999999999999887777789999999999998899999999999999999999999988


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      .||+
T Consensus       173 ~~i~  176 (245)
T PRK12936        173 RNVT  176 (245)
T ss_pred             hCeE
Confidence            7764

>TIGR02415 23BDH acetoin reductases

Probab=99.97  E-value=3.8e-29  Score=178.26  Aligned_cols=162  Identities=30%  Similarity=0.428  Sum_probs=147.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|+||.+++++|+++|++|++++|+.+..++...     ...+.++.+|+++++++.+++..+.++++++|++|||+|
T Consensus         7 G~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag   86 (254)
T TIGR02415         7 GGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVMVNNAG   86 (254)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            899999999999999999999999998765544322     346788999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      ....+++.+.+.++|++.+++|+.+++.+++.+++.|++.+ ++++|++||..+..+.+....|+++|+++++|++.++.
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~  166 (254)
T TIGR02415        87 VAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQ  166 (254)
T ss_pred             cCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHHHHHHHHH
Confidence            87777888999999999999999999999999999997754 47999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      ++++.||+
T Consensus       167 ~~~~~~i~  174 (254)
T TIGR02415       167 ELAPKGIT  174 (254)
T ss_pred             HhcccCeE
Confidence            99988874

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.8e-29  Score=181.42  Aligned_cols=161  Identities=39%  Similarity=0.570  Sum_probs=146.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+|+||++++++|+++|++|++++|+.+..++...       +.++.++.+|++|+++++. ++++.+.++++|++|||
T Consensus        10 Gasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~id~vv~~   88 (280)
T PRK06914         10 GASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGRIDLLVNN   88 (280)
T ss_pred             CCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCCeeEEEEC
Confidence            899999999999999999999999999776554422       2468889999999999999 99999999999999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      +|....+++.+.+.+++++.+++|+.+++.+++.++|.|++.+.++||++||..+..+.++...|+++|++++.|+++++
T Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~  168 (280)
T PRK06914         89 AGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLR  168 (280)
T ss_pred             CcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHHHHHHHHHHHH
Confidence            99877777888899999999999999999999999999987778899999999899998999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|+.++||+
T Consensus       169 ~~~~~~~i~  177 (280)
T PRK06914        169 LELKPFGID  177 (280)
T ss_pred             HHhhhhCCE
Confidence            999998875

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.97  E-value=4e-29  Score=177.14  Aligned_cols=162  Identities=28%  Similarity=0.374  Sum_probs=145.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh-hHHhhh-----cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA-TMADLE-----QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~-~~~~~~-----~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+++||.++|++|+++|++|++++|+.+ ...+..     ...++.++.+|+++.++++.+++.+.++++++|++|||+
T Consensus         9 G~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~a   88 (245)
T PRK12824          9 GAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVDILVNNA   88 (245)
T ss_pred             CCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            89999999999999999999999999843 122111     124688999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.++|+..+++|+.+++.+++.++|.|++.+.++||++||..+..+.++...|+++|+++++|++.++.
T Consensus        89 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~  168 (245)
T PRK12824         89 GITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALAS  168 (245)
T ss_pred             CCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHHHHHHHHHH
Confidence            98777778889999999999999999999999999999877788999999999998889999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      ++++.||+
T Consensus       169 ~~~~~~i~  176 (245)
T PRK12824        169 EGARYGIT  176 (245)
T ss_pred             HHHHhCeE
Confidence            99888874

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.97  E-value=6.4e-29  Score=176.47  Aligned_cols=162  Identities=27%  Similarity=0.417  Sum_probs=143.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEec-ChhhHHhhh----c-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGR-SKATMADLE----Q-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r-~~~~~~~~~----~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+|+||.+++++|+++|++|+++.+ +.+..++..    + ..++.++++|+++++++.++++++.+.++++|++|||+
T Consensus        13 G~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~a   92 (247)
T PRK12935         13 GGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNA   92 (247)
T ss_pred             CCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            89999999999999999999987654 444433332    1 24688999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |......+.+.+.+.++..+++|+.+++.+++.++|.|.+.+.+++|++||..+..+.++...|+++|++++++++.++.
T Consensus        93 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~  172 (247)
T PRK12935         93 GITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLAL  172 (247)
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHHHHHHHHHHHHHH
Confidence            98777777788999999999999999999999999999877778999999999888888899999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      ++.+.||+
T Consensus       173 ~~~~~~i~  180 (247)
T PRK12935        173 ELAKTNVT  180 (247)
T ss_pred             HHHHcCcE
Confidence            99888874

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.6e-29  Score=178.84  Aligned_cols=160  Identities=27%  Similarity=0.353  Sum_probs=141.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHh---hh-cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMAD---LE-QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~---~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||++|||++++++|+++|++|++++|+.+..+.   +. ...++.++.+|+++.++++.+++++.++++++|++|||+|.
T Consensus        14 GasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~   93 (258)
T PRK08628         14 GGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGV   93 (258)
T ss_pred             CCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCcc
Confidence            899999999999999999999999998765421   11 13568899999999999999999999999999999999997


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHh
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                      ....++.... ++|+..+++|+.+++.+.+.++|.+++. .++||++||..+..+.++...|+++|++++++++.++.|+
T Consensus        94 ~~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~  171 (258)
T PRK08628         94 NDGVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVAL  171 (258)
T ss_pred             cCCCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCCCCCchhHHHHHHHHHHHHHHHHHH
Confidence            6555555555 9999999999999999999999988654 4899999999999998899999999999999999999999


Q ss_pred             ccCCCC
Q 042185          157 GHFGID  162 (162)
Q Consensus       157 ~~~gi~  162 (162)
                      .++|||
T Consensus       172 ~~~~i~  177 (258)
T PRK08628        172 AKDGVR  177 (258)
T ss_pred             hhcCeE
Confidence            988875

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.97  E-value=4.4e-29  Score=177.50  Aligned_cols=162  Identities=27%  Similarity=0.407  Sum_probs=147.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|+||.+++++|+++|++|++++|+.+..+++..     ..++.++.+|+++.++++++++.+.++++++|++|||+|
T Consensus        10 Gas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~vi~~ag   89 (250)
T TIGR03206        10 GGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVDVLVNNAG   89 (250)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            899999999999999999999999999876655432     246889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....++.+.+.++|+..+++|+.+++.+++.+++.|++.+.+++|++||..+..+.+....|+.+|++++.++++++.+
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~  169 (250)
T TIGR03206        90 WDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMARE  169 (250)
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHHHHHHHHHHHHH
Confidence            87667788889999999999999999999999999998777789999999999999899999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      +.+.||+
T Consensus       170 ~~~~~i~  176 (250)
T TIGR03206       170 HARHGIT  176 (250)
T ss_pred             HhHhCcE
Confidence            9877764

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=5.2e-29  Score=177.96  Aligned_cols=162  Identities=28%  Similarity=0.352  Sum_probs=142.9

Q ss_pred             CCC--CchHHHHHHHHHHCCCeEEEEecC-----------hhhH----Hhhh-cCCceeEEEeccCChHHHHHHHHHHHH
Q 042185            1 CSQ--GGIGHALARAFAASDCRVVATGRS-----------KATM----ADLE-QDPRFFVQELDVLSEQSVQNVLSNVLE   62 (162)
Q Consensus         1 Ga~--~giG~~ia~~l~~~g~~vi~~~r~-----------~~~~----~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~   62 (162)
                      ||+  +|||.+++++|+++|++|++++|+           .+..    +++. ....+.++.+|+++.++++.+++++.+
T Consensus        12 Gas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   91 (256)
T PRK12748         12 GASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNRVFYAVSE   91 (256)
T ss_pred             CCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            677  489999999999999999999987           1111    1111 134688999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhH
Q 042185           63 KFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASK  142 (162)
Q Consensus        63 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK  142 (162)
                      +++++|++|||+|.....++.+.+.++++..+++|+.+++.+++++.+.|.++..+++|++||..+..+.++...|+++|
T Consensus        92 ~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK  171 (256)
T PRK12748         92 RLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPDELAYAATK  171 (256)
T ss_pred             hCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCCCchHHHHHH
Confidence            99999999999998777788888999999999999999999999999999777778999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHhccCCCC
Q 042185          143 AALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       143 aa~~~l~~~l~~e~~~~gi~  162 (162)
                      +++++++++++.|+.+.||+
T Consensus       172 ~a~~~~~~~la~e~~~~~i~  191 (256)
T PRK12748        172 GAIEAFTKSLAPELAEKGIT  191 (256)
T ss_pred             HHHHHHHHHHHHHHHHhCeE
Confidence            99999999999999888875

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.97  E-value=4.1e-29  Score=176.69  Aligned_cols=162  Identities=22%  Similarity=0.283  Sum_probs=142.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh-hhHHhhh----c-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK-ATMADLE----Q-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~-~~~~~~~----~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||.++|++|+++|++|++++|+. +..+...    . ..++.++.+|+++.++++.+++++.+.++++|++|+|+
T Consensus         5 Gas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~li~~a   84 (239)
T TIGR01831         5 GASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGVVLNA   84 (239)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            8999999999999999999999888653 3333222    1 35688999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHH-HhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVV-PHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~-~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      |.....++.+.+.++|+.++++|+.+++.+++.+. |.+++++.++||++||..+..+.+....|+++|++++.++++++
T Consensus        85 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~la  164 (239)
T TIGR01831        85 GITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALA  164 (239)
T ss_pred             CCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHHHHHHHH
Confidence            98776777788999999999999999999999875 55555667899999999999999999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++||+
T Consensus       165 ~e~~~~gi~  173 (239)
T TIGR01831       165 VELAKRKIT  173 (239)
T ss_pred             HHHhHhCeE
Confidence            999998875

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.97  E-value=3.1e-29  Score=177.67  Aligned_cols=161  Identities=30%  Similarity=0.480  Sum_probs=146.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc---CCceeEEEeccCChHHHHHHHHHHHHHcC--CccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ---DPRFFVQELDVLSEQSVQNVLSNVLEKFG--KIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--~id~vi~~ag   75 (162)
                      |.-+|+|+.+|++|.++|++|++..-+++..+.++.   ..+...++.|+|++++++++.+.+.+..+  .+-.+|||||
T Consensus        36 GCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gLwglVNNAG  115 (322)
T KOG1610|consen   36 GCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGLWGLVNNAG  115 (322)
T ss_pred             cCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccccceeEEeccc
Confidence            677899999999999999999999988776666544   46788889999999999999999988764  4888999999


Q ss_pred             CC-CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           76 VQ-CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        76 ~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      +. ..++.+..+.+++++.+++|+.|++.+++.++|+++++ .||||++||..|..+.|...+|++||+|++.|+.++++
T Consensus       116 i~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a-rGRvVnvsS~~GR~~~p~~g~Y~~SK~aVeaf~D~lR~  194 (322)
T KOG1610|consen  116 ISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA-RGRVVNVSSVLGRVALPALGPYCVSKFAVEAFSDSLRR  194 (322)
T ss_pred             cccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-cCeEEEecccccCccCcccccchhhHHHHHHHHHHHHH
Confidence            65 66899999999999999999999999999999988654 58999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |+.++||+
T Consensus       195 EL~~fGV~  202 (322)
T KOG1610|consen  195 ELRPFGVK  202 (322)
T ss_pred             HHHhcCcE
Confidence            99999984

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=6.2e-29  Score=176.98  Aligned_cols=162  Identities=33%  Similarity=0.464  Sum_probs=140.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEec-ChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCC-ccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGR-SKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGK-IDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r-~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~-id~vi~~ag~   76 (162)
                      ||+||||+++++.|+++|++|+++.+ +.+..+.+..  ..++.++.+|++++++++.+++++.+.+++ +|++|||+|.
T Consensus        12 Gas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~li~~ag~   91 (253)
T PRK08642         12 GGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITTVVNNALA   91 (253)
T ss_pred             CCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCc
Confidence            89999999999999999999988755 4444444332  246788999999999999999999998887 9999999986


Q ss_pred             CC------CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           77 QC------VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        77 ~~------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      ..      ..++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||.....+.++...|+++|+++++|++
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~l~~  171 (253)
T PRK08642         92 DFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTAKAALLGLTR  171 (253)
T ss_pred             cccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccchHHHHHHHHHHHH
Confidence            31      245778899999999999999999999999999987777999999998877777778899999999999999


Q ss_pred             HHHHHhccCCCC
Q 042185          151 TLRLELGHFGID  162 (162)
Q Consensus       151 ~l~~e~~~~gi~  162 (162)
                      .++++++++|||
T Consensus       172 ~la~~~~~~~i~  183 (253)
T PRK08642        172 NLAAELGPYGIT  183 (253)
T ss_pred             HHHHHhCccCeE
Confidence            999999999886

>PRK09186 flagellin modification protein A; Provisional

Probab=99.97  E-value=3.9e-29  Score=178.36  Aligned_cols=162  Identities=24%  Similarity=0.293  Sum_probs=139.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||++|||+++|+.|+++|++|++++|+.+..+++..       ...+.++.+|++|+++++.+++++.+.++++|++|||
T Consensus        11 Gas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~id~vi~~   90 (256)
T PRK09186         11 GAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGKIDGAVNC   90 (256)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccEEEEC
Confidence            899999999999999999999999999877654422       1245677999999999999999999999999999999


Q ss_pred             CCCCC---CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC----------CCchhhhH
Q 042185           74 AGVQC---VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG----------PWAGTYTA  140 (162)
Q Consensus        74 ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~~~~~y~~  140 (162)
                      |+...   ..++.+.+.+.|+..+++|+.+++.++++++|.|++++.++||++||..+..+.          .....|++
T Consensus        91 A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~Y~~  170 (256)
T PRK09186         91 AYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAA  170 (256)
T ss_pred             CccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccccCCcchhHH
Confidence            97542   346778899999999999999999999999999987777899999998765431          12346999


Q ss_pred             hHHHHHHHHHHHHHHhccCCCC
Q 042185          141 SKAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       141 sKaa~~~l~~~l~~e~~~~gi~  162 (162)
                      +|+++++|++.++.|+.+.|||
T Consensus       171 sK~a~~~l~~~la~e~~~~~i~  192 (256)
T PRK09186        171 IKAGIIHLTKYLAKYFKDSNIR  192 (256)
T ss_pred             HHHHHHHHHHHHHHHhCcCCeE
Confidence            9999999999999999998875

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.2e-29  Score=176.65  Aligned_cols=162  Identities=30%  Similarity=0.427  Sum_probs=147.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|+||.+++++|+++|++|++++|+.+..++...     ..++.++.+|+++.++++++++++.+.++++|++|||+|
T Consensus        14 Ga~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag   93 (250)
T PRK12939         14 GAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAG   93 (250)
T ss_pred             CCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            899999999999999999999999998876554432     246889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....++.+.+.+.|+..++.|+.+++.+++.+.|.+.+++.+++|++||..+..+.+....|+++|++++.+++.++.+
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~~~~~~~~~l~~~  173 (250)
T PRK12939         94 ITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARE  173 (250)
T ss_pred             CCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHHHHHHHHHHHHHHH
Confidence            87777788889999999999999999999999999998877889999999999988888999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      +++.+|+
T Consensus       174 ~~~~~i~  180 (250)
T PRK12939        174 LGGRGIT  180 (250)
T ss_pred             HhhhCEE
Confidence            9888774

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.7e-29  Score=183.49  Aligned_cols=160  Identities=24%  Similarity=0.322  Sum_probs=136.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||++|||+++|++|+++|++|++++|+.++.++..+       +..+.++.+|+++.++++++++++.+.++++|++|||
T Consensus        21 Gas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~iD~li~n  100 (313)
T PRK05854         21 GASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRPIHLLINN  100 (313)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEEC
Confidence            899999999999999999999999999876554322       2467899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC------------CCCchhhhHh
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP------------GPWAGTYTAS  141 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~------------~~~~~~y~~s  141 (162)
                      ||.... +..+.+.++|+..+++|+.+++.+++.++|.|++. .++||++||..+..+            .++...|+.|
T Consensus       101 AG~~~~-~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~S  178 (313)
T PRK05854        101 AGVMTP-PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDDLNWERSYAGMRAYSQS  178 (313)
T ss_pred             CccccC-CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCcccccccccCcchhhhHHH
Confidence            997543 34457889999999999999999999999999754 589999999876543            2456789999


Q ss_pred             HHHHHHHHHHHHHHh--ccCCCC
Q 042185          142 KAALHSLTDTLRLEL--GHFGID  162 (162)
Q Consensus       142 Kaa~~~l~~~l~~e~--~~~gi~  162 (162)
                      |+++..|++.|+.++  ...||+
T Consensus       179 K~a~~~~~~~la~~~~~~~~gI~  201 (313)
T PRK05854        179 KIAVGLFALELDRRSRAAGWGIT  201 (313)
T ss_pred             HHHHHHHHHHHHHHhhcCCCCeE
Confidence            999999999999864  345653

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.4e-29  Score=178.85  Aligned_cols=162  Identities=31%  Similarity=0.460  Sum_probs=146.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|+||++++++|+++|++|++++|+.+..++..+     ..++.++.+|++++++++++++++.+.++++|++|||+|
T Consensus        17 Ga~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~Ag   96 (274)
T PRK07775         17 GASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAG   96 (274)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            899999999999999999999999998766554432     246778899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....+..+.+.++++..+++|+.+++.+++.++|.+++++.++||++||..+..+.+....|+++|++++.+++.++.+
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~~~~~  176 (274)
T PRK07775         97 DTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQME  176 (274)
T ss_pred             cCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence            87667777889999999999999999999999999998777889999999999988888889999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      +.+.||+
T Consensus       177 ~~~~gi~  183 (274)
T PRK07775        177 LEGTGVR  183 (274)
T ss_pred             hcccCeE
Confidence            9888874

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.7e-29  Score=176.53  Aligned_cols=162  Identities=32%  Similarity=0.467  Sum_probs=146.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|+||++++++|+++|++|++++|+.+.++++..     ..++.++.+|+++.++++++++++.+.++++|++|||+|
T Consensus        16 Gasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag   95 (258)
T PRK06949         16 GASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTIDILVNNSG   95 (258)
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            899999999999999999999999999877665533     246789999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC--------CCeEEEeccccccCCCCCchhhhHhHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK--------KGKIINVGSVTVAAPGPWAGTYTASKAALHS  147 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~  147 (162)
                      .....++.+.+.++|+.++++|+.+++.+++++.|.|.++.        .+++|++||..+..+.+....|+++|+++..
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  175 (258)
T PRK06949         96 VSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCMSKAAVVH  175 (258)
T ss_pred             CCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCccHHHHHHHHHHH
Confidence            87667777888999999999999999999999999987553        4799999999998888889999999999999


Q ss_pred             HHHHHHHHhccCCCC
Q 042185          148 LTDTLRLELGHFGID  162 (162)
Q Consensus       148 l~~~l~~e~~~~gi~  162 (162)
                      +++.++.+++++|||
T Consensus       176 ~~~~la~~~~~~~i~  190 (258)
T PRK06949        176 MTRAMALEWGRHGIN  190 (258)
T ss_pred             HHHHHHHHHHhcCeE
Confidence            999999999988874

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=2.8e-29  Score=177.62  Aligned_cols=162  Identities=27%  Similarity=0.362  Sum_probs=152.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC-------CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD-------PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~-------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      |||+|||+++|.++..+|++|.++.|+.+++++++.+       ..+.+..+|++|.+++..+++++.+..+++|.+|+|
T Consensus        40 ggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d~l~~c  119 (331)
T KOG1210|consen   40 GGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPIDNLFCC  119 (331)
T ss_pred             cCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCcceEEEe
Confidence            8999999999999999999999999999988887653       237799999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTL  152 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l  152 (162)
                      ||..-++-+.+.+.+.++..+++|++++++++++.++.|++.. .|+|+++||..+..+..++.+|+++|+|+.+|+..+
T Consensus       120 AG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~alrgLa~~l  199 (331)
T KOG1210|consen  120 AGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFALRGLAEAL  199 (331)
T ss_pred             cCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHHHHHHHHH
Confidence            9999899999999999999999999999999999999998765 679999999999999999999999999999999999


Q ss_pred             HHHhccCCCC
Q 042185          153 RLELGHFGID  162 (162)
Q Consensus       153 ~~e~~~~gi~  162 (162)
                      ++|+.++||+
T Consensus       200 ~qE~i~~~v~  209 (331)
T KOG1210|consen  200 RQELIKYGVH  209 (331)
T ss_pred             HHHHhhcceE
Confidence            9999998874

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.97  E-value=7.3e-29  Score=177.02  Aligned_cols=162  Identities=27%  Similarity=0.413  Sum_probs=148.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|+||++++++|+++|++|++++|+.+..++...     ..++.++.+|+++.++++.+++++.+.++++|++|||+|
T Consensus        11 G~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~a~   90 (258)
T PRK12429         11 GAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAG   90 (258)
T ss_pred             CCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            899999999999999999999999999876655432     356888999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....++.+.+.++++..+++|+.+++.+++.+++.|++++.++||++||..+..+.++...|+++|+++..+++.++.+
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a~~~~~~~l~~~  170 (258)
T PRK12429         91 IQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALE  170 (258)
T ss_pred             CCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHHHHHHHHHHHHH
Confidence            87777788889999999999999999999999999998888899999999999999999999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      +.+.||+
T Consensus       171 ~~~~~i~  177 (258)
T PRK12429        171 GATHGVT  177 (258)
T ss_pred             hcccCeE
Confidence            9888764

>PRK06196 oxidoreductase; Provisional

Probab=99.97  E-value=5.8e-29  Score=182.66  Aligned_cols=160  Identities=23%  Similarity=0.231  Sum_probs=138.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      ||++|||+++|++|+++|++|++++|+.+..++..++ ..+.++.+|++|.++++++++++.+.++++|++|||||....
T Consensus        33 GasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~  112 (315)
T PRK06196         33 GGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILINNAGVMAC  112 (315)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEEECCCCCCC
Confidence            8999999999999999999999999998876655433 237889999999999999999999999999999999997532


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC------------CCCCchhhhHhHHHHHH
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA------------PGPWAGTYTASKAALHS  147 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~------------~~~~~~~y~~sKaa~~~  147 (162)
                        ....+.++|+..+++|+.+++.+++.++|.|++++.++||++||.....            +.++...|+.||+++..
T Consensus       113 --~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~  190 (315)
T PRK06196        113 --PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYGQSKTANAL  190 (315)
T ss_pred             --CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHHHHHHHHHHHHH
Confidence              2345678899999999999999999999999877778999999975432            23455789999999999


Q ss_pred             HHHHHHHHhccCCCC
Q 042185          148 LTDTLRLELGHFGID  162 (162)
Q Consensus       148 l~~~l~~e~~~~gi~  162 (162)
                      |++.++.++++.|||
T Consensus       191 ~~~~la~~~~~~gi~  205 (315)
T PRK06196        191 FAVHLDKLGKDQGVR  205 (315)
T ss_pred             HHHHHHHHhcCCCcE
Confidence            999999999998885

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.97  E-value=8.8e-29  Score=177.01  Aligned_cols=162  Identities=33%  Similarity=0.465  Sum_probs=143.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|+||.+++++|+++|++|++++|+.+.++....     ..++.++.+|++|+++++++++++.+.++++|++|||+|
T Consensus        19 Ga~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~vi~~ag   98 (259)
T PRK08213         19 GGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHVDILVNNAG   98 (259)
T ss_pred             CCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence            899999999999999999999999999876654432     246778999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHh-HhhcCCCeEEEeccccccCCCCC----chhhhHhHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH-MAYRKKGKIINVGSVTVAAPGPW----AGTYTASKAALHSLTD  150 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~~~~~iv~isS~~~~~~~~~----~~~y~~sKaa~~~l~~  150 (162)
                      .....+..+.+.+.|+..+++|+.+++.+++++.+. |.+++.+++|++||..+..+.+.    ...|+++|++++.+++
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y~~sKa~~~~~~~  178 (259)
T PRK08213         99 ATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTR  178 (259)
T ss_pred             CCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchHHHHHHHHHHHHH
Confidence            866667778899999999999999999999999998 76666789999999877765544    4889999999999999


Q ss_pred             HHHHHhccCCCC
Q 042185          151 TLRLELGHFGID  162 (162)
Q Consensus       151 ~l~~e~~~~gi~  162 (162)
                      +++.+++++||+
T Consensus       179 ~~a~~~~~~gi~  190 (259)
T PRK08213        179 ALAAEWGPHGIR  190 (259)
T ss_pred             HHHHHhcccCEE
Confidence            999999988875

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.3e-29  Score=174.96  Aligned_cols=162  Identities=26%  Similarity=0.430  Sum_probs=142.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc------CCceeEEEeccCC--hHHHHHHHHHHHHHc-CCccEEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ------DPRFFVQELDVLS--EQSVQNVLSNVLEKF-GKIDVLV   71 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~------~~~~~~~~~D~~~--~~~i~~~~~~~~~~~-~~id~vi   71 (162)
                      ||+||||++++++|+++|++|++++|+.+..++..+      .....++.+|+++  .++++.+++++.+.+ +++|++|
T Consensus        13 G~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~~id~vi   92 (239)
T PRK08703         13 GASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQGKLDGIV   92 (239)
T ss_pred             CCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhCCCCCEEE
Confidence            899999999999999999999999999876655432      2356788899976  568899999998888 8999999


Q ss_pred             ECCCCCC-CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           72 NNAGVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        72 ~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      ||+|... ..++.+.+.++|++.+++|+.+++.+++.++|.|.+.+.+++|+++|..+..+.++...|+++|++++.|++
T Consensus        93 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~~~~~~  172 (239)
T PRK08703         93 HCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAALNYLCK  172 (239)
T ss_pred             EeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchHHhHHHHHHHHH
Confidence            9999753 357788899999999999999999999999999987778999999999999998888999999999999999


Q ss_pred             HHHHHhccC-CCC
Q 042185          151 TLRLELGHF-GID  162 (162)
Q Consensus       151 ~l~~e~~~~-gi~  162 (162)
                      .++.|+.++ +||
T Consensus       173 ~la~e~~~~~~i~  185 (239)
T PRK08703        173 VAADEWERFGNLR  185 (239)
T ss_pred             HHHHHhccCCCeE
Confidence            999999876 464

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.2e-29  Score=182.23  Aligned_cols=160  Identities=25%  Similarity=0.271  Sum_probs=137.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhh----hc---CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADL----EQ---DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~----~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||++|||+++|++|+++|++|++++|+.+..++.    ..   ...+.++.+|++|.++++++++++.+.++++|++|||
T Consensus        23 Gas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~n  102 (306)
T PRK06197         23 GANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYPRIDLLINN  102 (306)
T ss_pred             CCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCCCCEEEEC
Confidence            8999999999999999999999999997665432    21   2467889999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC-------------CCCCchhhhH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA-------------PGPWAGTYTA  140 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-------------~~~~~~~y~~  140 (162)
                      ||....  ....+.++++..+++|+.+++.+++.++|.|++.+.++||++||..+..             +.++...|+.
T Consensus       103 Ag~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  180 (306)
T PRK06197        103 AGVMYT--PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYNRVAAYGQ  180 (306)
T ss_pred             CccccC--CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCCCcHHHHHH
Confidence            997543  2346778899999999999999999999999877778999999976432             2345678999


Q ss_pred             hHHHHHHHHHHHHHHhccCCCC
Q 042185          141 SKAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       141 sKaa~~~l~~~l~~e~~~~gi~  162 (162)
                      ||++++.|++.++.++++.|||
T Consensus       181 SK~a~~~~~~~la~~l~~~~i~  202 (306)
T PRK06197        181 SKLANLLFTYELQRRLAAAGAT  202 (306)
T ss_pred             HHHHHHHHHHHHHHHhhcCCCC
Confidence            9999999999999999888764

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=4.7e-29  Score=181.27  Aligned_cols=159  Identities=22%  Similarity=0.312  Sum_probs=127.6

Q ss_pred             CC--CCchHHHHHHHHHHCCCeEEEEecChhhHHhh---------------hcCC-----ceeEEEeccCCh--------
Q 042185            1 CS--QGGIGHALARAFAASDCRVVATGRSKATMADL---------------EQDP-----RFFVQELDVLSE--------   50 (162)
Q Consensus         1 Ga--~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~---------------~~~~-----~~~~~~~D~~~~--------   50 (162)
                      |+  ++|||+++|+.|+++|++|++.++.+ .++..               ....     .+..+..|+++.        
T Consensus        15 Ga~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~v~~~i~   93 (299)
T PRK06300         15 GIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPEDVPEEIR   93 (299)
T ss_pred             CCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCEEeecccC
Confidence            55  49999999999999999999987541 00000               0000     111123344333        


Q ss_pred             ----------HHHHHHHHHHHHHcCCccEEEECCCCCC--CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCC
Q 042185           51 ----------QSVQNVLSNVLEKFGKIDVLVNNAGVQC--VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG  118 (162)
Q Consensus        51 ----------~~i~~~~~~~~~~~~~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~  118 (162)
                                ++++++++++.+++|++|++|||||...  ..++.+++.++|++.+++|+.+++.++++++|.|++  .|
T Consensus        94 ~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~--~G  171 (299)
T PRK06300         94 ENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNP--GG  171 (299)
T ss_pred             ccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CC
Confidence                      3589999999999999999999998753  468889999999999999999999999999999964  47


Q ss_pred             eEEEeccccccCCCCCch-hhhHhHHHHHHHHHHHHHHhcc-CCCC
Q 042185          119 KIINVGSVTVAAPGPWAG-TYTASKAALHSLTDTLRLELGH-FGID  162 (162)
Q Consensus       119 ~iv~isS~~~~~~~~~~~-~y~~sKaa~~~l~~~l~~e~~~-~gi~  162 (162)
                      +||+++|..+..+.|... .|+++|+|+.+|+++|+.|+++ +|||
T Consensus       172 ~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIr  217 (299)
T PRK06300        172 STISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIR  217 (299)
T ss_pred             eEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeE
Confidence            999999999888888764 8999999999999999999987 5886

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.97  E-value=8.2e-29  Score=177.97  Aligned_cols=162  Identities=25%  Similarity=0.311  Sum_probs=132.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecC-hhhHHhhhc------CCceeEEEeccCChHHH----HHHHHHHHHHcCCccE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRS-KATMADLEQ------DPRFFVQELDVLSEQSV----QNVLSNVLEKFGKIDV   69 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~-~~~~~~~~~------~~~~~~~~~D~~~~~~i----~~~~~~~~~~~~~id~   69 (162)
                      ||++|||++++++|+++|++|++++|+ .+.++++.+      ..+..++.+|++|++++    +.+++.+.+.++++|+
T Consensus         8 Gas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~g~iD~   87 (267)
T TIGR02685         8 GAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRAFGRCDV   87 (267)
T ss_pred             CCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHccCCceE
Confidence            899999999999999999999987654 444443321      23566789999999855    5666777778899999


Q ss_pred             EEECCCCCCCCCCCCCCh-----------HHHHHHHHhhhhhHHHHHHHHHHhHhhc------CCCeEEEeccccccCCC
Q 042185           70 LVNNAGVQCVGPLAEVPL-----------SAMEQTFNTNVFGPMRLVQAVVPHMAYR------KKGKIINVGSVTVAAPG  132 (162)
Q Consensus        70 vi~~ag~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~~iv~isS~~~~~~~  132 (162)
                      +|||||.....++.+.+.           ++|++++++|+.+++.+++++.|.|+..      ..+.|++++|..+..+.
T Consensus        88 lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~~~~~~  167 (267)
T TIGR02685        88 LVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPL  167 (267)
T ss_pred             EEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhhccCCC
Confidence            999999765545444333           3689999999999999999999998543      24689999999888888


Q ss_pred             CCchhhhHhHHHHHHHHHHHHHHhccCCCC
Q 042185          133 PWAGTYTASKAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       133 ~~~~~y~~sKaa~~~l~~~l~~e~~~~gi~  162 (162)
                      ++...|+++|+++++|+++++.|+++.|||
T Consensus       168 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~  197 (267)
T TIGR02685       168 LGFTMYTMAKHALEGLTRSAALELAPLQIR  197 (267)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHhhhCeE
Confidence            999999999999999999999999998875

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.97  E-value=2.2e-28  Score=174.96  Aligned_cols=162  Identities=25%  Similarity=0.395  Sum_probs=146.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|+||+++++.|+++|++|++++|+++..++..+     ...+.++.+|+++.++++.+++++.+.++++|++|||+|
T Consensus        14 Gasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag   93 (262)
T PRK13394         14 GAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAG   93 (262)
T ss_pred             CCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence            899999999999999999999999999866554432     245778999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhH-hhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM-AYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      .....++.+.+.++|+..+++|+.+++.+++.+++.| ++.+.++||++||..+..+.+....|+++|+++.++++.++.
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~~~~~la~  173 (262)
T PRK13394         94 IQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAK  173 (262)
T ss_pred             cCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHHHHHHHHHHHHHHH
Confidence            8777777788899999999999999999999999999 666678999999998888888889999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      ++.+.|||
T Consensus       174 ~~~~~~i~  181 (262)
T PRK13394        174 EGAKHNVR  181 (262)
T ss_pred             HhhhcCeE
Confidence            99888775

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2e-28  Score=176.62  Aligned_cols=162  Identities=22%  Similarity=0.364  Sum_probs=145.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+|+||.+++++|+++|++|++++|+.+..+....       ..++.++.+|++++++++.+++++.+.++++|++|||
T Consensus        14 Gasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~li~~   93 (276)
T PRK05875         14 GGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRLHGVVHC   93 (276)
T ss_pred             CCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            899999999999999999999999998766544322       2467888999999999999999999999999999999


Q ss_pred             CCCCC-CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHH
Q 042185           74 AGVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTL  152 (162)
Q Consensus        74 ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l  152 (162)
                      +|... ..++.+.+.++|+..+++|+.+++.+++.+.+.|.+++.++|+++||..+..+.+....|+++|++++.+++.+
T Consensus        94 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~  173 (276)
T PRK05875         94 AGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLA  173 (276)
T ss_pred             CCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHHHHHHHHHHHHHH
Confidence            99653 35677788999999999999999999999999998777789999999999888888899999999999999999


Q ss_pred             HHHhccCCCC
Q 042185          153 RLELGHFGID  162 (162)
Q Consensus       153 ~~e~~~~gi~  162 (162)
                      +.++...|||
T Consensus       174 ~~~~~~~~i~  183 (276)
T PRK05875        174 ADELGPSWVR  183 (276)
T ss_pred             HHHhcccCeE
Confidence            9999988875

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.3e-28  Score=172.56  Aligned_cols=159  Identities=24%  Similarity=0.296  Sum_probs=143.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||.+++++|+++|++|++++|+.+..+...+      ..++.++.+|++++++++++++++.+   ++|++|||+
T Consensus         8 Gas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d~vv~~a   84 (243)
T PRK07102          8 GATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LPDIVLIAV   84 (243)
T ss_pred             cCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cCCEEEECC
Confidence            899999999999999999999999999876554322      24788999999999999999998764   579999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.+++++.+++|+.+++.+++++.|.|.+++.+++|++||..+..+.+....|+++|+++++++++++.
T Consensus        85 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~  164 (243)
T PRK07102         85 GTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTAFLSGLRN  164 (243)
T ss_pred             cCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHHHHHHHHHH
Confidence            98766777788999999999999999999999999999887789999999999988888899999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |+++.||+
T Consensus       165 el~~~gi~  172 (243)
T PRK07102        165 RLFKSGVH  172 (243)
T ss_pred             HhhccCcE
Confidence            99998875

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.96  E-value=2.7e-28  Score=179.01  Aligned_cols=162  Identities=23%  Similarity=0.246  Sum_probs=136.4

Q ss_pred             CCCCchHHHHHHHHHHCC-CeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASD-CRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g-~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++++.|+++| ++|++++|+.+..+++..     ...+.++.+|+++.++++.+++++.+.++++|++||||
T Consensus        10 Gas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~lI~nA   89 (314)
T TIGR01289        10 GASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPLDALVCNA   89 (314)
T ss_pred             CCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECC
Confidence            899999999999999999 999999999877665433     24567889999999999999999988889999999999


Q ss_pred             CCCCC-CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC--CCeEEEeccccccCC--------------------
Q 042185           75 GVQCV-GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK--KGKIINVGSVTVAAP--------------------  131 (162)
Q Consensus        75 g~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~isS~~~~~~--------------------  131 (162)
                      |+... .+..+.+.++|+.++++|+.+++.+++.++|.|++++  .++||++||..+..+                    
T Consensus        90 G~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (314)
T TIGR01289        90 AVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLGDLSGLAA  169 (314)
T ss_pred             CccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccccccccccc
Confidence            97532 2344678899999999999999999999999997653  489999999876421                    


Q ss_pred             -------------CCCchhhhHhHHHHHHHHHHHHHHhc-cCCCC
Q 042185          132 -------------GPWAGTYTASKAALHSLTDTLRLELG-HFGID  162 (162)
Q Consensus       132 -------------~~~~~~y~~sKaa~~~l~~~l~~e~~-~~gi~  162 (162)
                                   ..+...|++||++...+++.+++++. +.||+
T Consensus       170 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~  214 (314)
T TIGR01289       170 GFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGIT  214 (314)
T ss_pred             cCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeE
Confidence                         12456799999999999999999985 45664

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.96  E-value=3.3e-28  Score=172.15  Aligned_cols=162  Identities=30%  Similarity=0.350  Sum_probs=145.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEec-ChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGR-SKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r-~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+++||++++++|+++|++|+++.| +.+..++...     ..++.++.+|++++++++++++++.+.++++|++|||+
T Consensus         7 G~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~a   86 (242)
T TIGR01829         7 GGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPIDVLVNNA   86 (242)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCcEEEECC
Confidence            89999999999999999999999888 5544433221     35688999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.++|+..+++|+.+++.+++.++|.|++.+.++||++||..+..+.++...|+++|+++..|++.++.
T Consensus        87 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~~~~~la~  166 (242)
T TIGR01829        87 GITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQ  166 (242)
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHHHH
Confidence            98777778888999999999999999999999999999877778999999998888888999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      ++.+.||+
T Consensus       167 ~~~~~~i~  174 (242)
T TIGR01829       167 EGATKGVT  174 (242)
T ss_pred             HhhhhCeE
Confidence            99888774

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.6e-28  Score=173.25  Aligned_cols=159  Identities=26%  Similarity=0.277  Sum_probs=139.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecC-hhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRS-KATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~-~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||++++++|+++|++|++++++ .+..+.+..     ...+.++.+|++|.++++++++++.+.++++|++|||+
T Consensus        16 Gas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD~vi~~a   95 (258)
T PRK09134         16 GAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGPITLLVNNA   95 (258)
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            899999999999999999999887654 444333221     34678899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.++|+..+++|+.+++.+++++.+.+.+...+++|+++|..+..+.|....|+++|++++++++.++.
T Consensus        96 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK~a~~~~~~~la~  175 (258)
T PRK09134         96 SLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKAALWTATRTLAQ  175 (258)
T ss_pred             cCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHHHHHHHHHHHHHH
Confidence            98777778888999999999999999999999999999877778999999987877778888999999999999999999


Q ss_pred             HhccC
Q 042185          155 ELGHF  159 (162)
Q Consensus       155 e~~~~  159 (162)
                      ++.+.
T Consensus       176 ~~~~~  180 (258)
T PRK09134        176 ALAPR  180 (258)
T ss_pred             HhcCC
Confidence            98754

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.1e-28  Score=174.09  Aligned_cols=159  Identities=30%  Similarity=0.390  Sum_probs=139.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|+||++++++|+++|++|++++|+.+..+++.+     .....++.+|+++.++++.+++++.+.++++|++|||+|
T Consensus        13 Gasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag   92 (250)
T PRK07774         13 GAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNAA   92 (250)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence            899999999999999999999999998765544322     235778999999999999999999999999999999999


Q ss_pred             CCC---CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHH
Q 042185           76 VQC---VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTL  152 (162)
Q Consensus        76 ~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l  152 (162)
                      ...   ..++.+.+.++|++.+++|+.+++.++++++|.|.+.+.++||++||..++.+   ...|+++|++++.+++++
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~---~~~Y~~sK~a~~~~~~~l  169 (250)
T PRK07774         93 IYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY---SNFYGLAKVGLNGLTQQL  169 (250)
T ss_pred             CcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC---ccccHHHHHHHHHHHHHH
Confidence            753   24567788999999999999999999999999998777889999999877654   468999999999999999


Q ss_pred             HHHhccCCCC
Q 042185          153 RLELGHFGID  162 (162)
Q Consensus       153 ~~e~~~~gi~  162 (162)
                      ++++...||+
T Consensus       170 ~~~~~~~~i~  179 (250)
T PRK07774        170 ARELGGMNIR  179 (250)
T ss_pred             HHHhCccCeE
Confidence            9999887764

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.1e-28  Score=173.39  Aligned_cols=157  Identities=29%  Similarity=0.430  Sum_probs=138.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      ||+||||++++++|+++|++|++++|+.+.++++.+ ..++.++.+|+++.++++++++++..   .+|.+|+|+|....
T Consensus         8 Gas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~---~~d~~i~~ag~~~~   84 (240)
T PRK06101          8 GATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPF---IPELWIFNAGDCEY   84 (240)
T ss_pred             cCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhccc---CCCEEEEcCccccc
Confidence            899999999999999999999999999887776654 34678899999999999999887642   57999999987544


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccC
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHF  159 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~  159 (162)
                      .+....+.++|++++++|+.+++.+++.+.|.|.+  ++++|++||..+..+.+....|+++|+++++|++.++.|+.++
T Consensus        85 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~  162 (240)
T PRK06101         85 MDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC--GHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLRPK  162 (240)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCeEEEEechhhccCCCCCchhhHHHHHHHHHHHHHHHHHHhc
Confidence            44556788999999999999999999999999843  4689999999999999999999999999999999999999998


Q ss_pred             CCC
Q 042185          160 GID  162 (162)
Q Consensus       160 gi~  162 (162)
                      ||+
T Consensus       163 gi~  165 (240)
T PRK06101        163 GIE  165 (240)
T ss_pred             Cce
Confidence            875

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3e-28  Score=176.99  Aligned_cols=160  Identities=27%  Similarity=0.428  Sum_probs=141.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhh-HHhh----hc-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKAT-MADL----EQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~-~~~~----~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+++||.+++++|+++|++|++++|+.+. .+..    .. ..++.++.+|+++.++++.+++++.+.++++|++|||+
T Consensus        53 GasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~lI~~A  132 (290)
T PRK06701         53 GGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNA  132 (290)
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            899999999999999999999999987532 2222    11 24678899999999999999999999999999999999


Q ss_pred             CCCC-CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           75 GVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        75 g~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      |... ..++.+.+.++|+..+++|+.+++.+++++.+.|++  .++||++||..+..+.+....|+++|++++.|+++++
T Consensus       133 g~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la  210 (290)
T PRK06701        133 AFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--GSAIINTGSITGYEGNETLIDYSATKGAIHAFTRSLA  210 (290)
T ss_pred             cccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--CCeEEEEecccccCCCCCcchhHHHHHHHHHHHHHHH
Confidence            9753 356778999999999999999999999999998843  4799999999999988889999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .++.++|||
T Consensus       211 ~~~~~~gIr  219 (290)
T PRK06701        211 QSLVQKGIR  219 (290)
T ss_pred             HHhhhcCeE
Confidence            999998885

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.8e-28  Score=173.07  Aligned_cols=161  Identities=32%  Similarity=0.515  Sum_probs=144.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|+||++++++|+++|++|++++|+.+..+++.+     ..++.++.+|+++.++++.+++++.++++++|++|||+|
T Consensus         8 Gasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag   87 (263)
T PRK06181          8 GASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDILVNNAG   87 (263)
T ss_pred             cCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            899999999999999999999999999766554322     346788999999999999999999999999999999999


Q ss_pred             CCCCCCCCCC-ChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEV-PLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        76 ~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      .....++.+. +.+.+++.+++|+.+++.+++.+++.|.+. .+++|++||..+..+.++...|+.+|++++++++.++.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~  166 (263)
T PRK06181         88 ITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRI  166 (263)
T ss_pred             cccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccCCCCCccHHHHHHHHHHHHHHHHHH
Confidence            8777777778 899999999999999999999999988644 58999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      ++.+.||+
T Consensus       167 ~~~~~~i~  174 (263)
T PRK06181        167 ELADDGVA  174 (263)
T ss_pred             HhhhcCce
Confidence            99988874

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.7e-28  Score=171.66  Aligned_cols=162  Identities=28%  Similarity=0.345  Sum_probs=138.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEec-ChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGR-SKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r-~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+++||.+++++|+++|++|+++++ +++..++..+     ...+.++.+|+++.++++++++++.++++++|++|||+
T Consensus         9 G~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~a   88 (248)
T PRK06123          9 GASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLDALVNNA   88 (248)
T ss_pred             CCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence            89999999999999999999988874 4333333211     24577899999999999999999999999999999999


Q ss_pred             CCCCC-CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC---CCeEEEeccccccCCCCC-chhhhHhHHHHHHHH
Q 042185           75 GVQCV-GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK---KGKIINVGSVTVAAPGPW-AGTYTASKAALHSLT  149 (162)
Q Consensus        75 g~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~isS~~~~~~~~~-~~~y~~sKaa~~~l~  149 (162)
                      |.... .++.+.+.++|+..+++|+.+++.+++.+++.|.++.   +|+||++||..+..+.+. ...|+++|+++++|+
T Consensus        89 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~sKaa~~~~~  168 (248)
T PRK06123         89 GILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMT  168 (248)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHHHHHHHHHH
Confidence            98643 4677889999999999999999999999999986542   578999999988887776 367999999999999


Q ss_pred             HHHHHHhccCCCC
Q 042185          150 DTLRLELGHFGID  162 (162)
Q Consensus       150 ~~l~~e~~~~gi~  162 (162)
                      +.++.++.+.|||
T Consensus       169 ~~la~~~~~~~i~  181 (248)
T PRK06123        169 IGLAKEVAAEGIR  181 (248)
T ss_pred             HHHHHHhcccCeE
Confidence            9999999988875

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.3e-28  Score=173.89  Aligned_cols=160  Identities=21%  Similarity=0.356  Sum_probs=133.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh----hhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK----ATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLV   71 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~----~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi   71 (162)
                      ||++|||+++|++|+++|++|+++.++.    +..++..+     +.++.++++|++++++++++++.+.+.++++|++|
T Consensus        15 Ga~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   94 (257)
T PRK12744         15 GGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAFGRPDIAI   94 (257)
T ss_pred             CCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhhCCCCEEE
Confidence            8999999999999999999976665432    22222211     34678899999999999999999999999999999


Q ss_pred             ECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHH
Q 042185           72 NNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDT  151 (162)
Q Consensus        72 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~  151 (162)
                      ||+|.....++.+.+.++|++.+++|+.+++.+++.+.|.|+.  .+++++++|.....+.+....|+++|+++++|+++
T Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~~iv~~~ss~~~~~~~~~~~Y~~sK~a~~~~~~~  172 (257)
T PRK12744         95 NTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND--NGKIVTLVTSLLGAFTPFYSAYAGSKAPVEHFTRA  172 (257)
T ss_pred             ECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc--CCCEEEEecchhcccCCCcccchhhHHHHHHHHHH
Confidence            9999877677888899999999999999999999999998853  36777764433333457788999999999999999


Q ss_pred             HHHHhccCCCC
Q 042185          152 LRLELGHFGID  162 (162)
Q Consensus       152 l~~e~~~~gi~  162 (162)
                      ++.|+.+.|||
T Consensus       173 la~e~~~~~i~  183 (257)
T PRK12744        173 ASKEFGARGIS  183 (257)
T ss_pred             HHHHhCcCceE
Confidence            99999998875

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.96  E-value=7.2e-28  Score=170.77  Aligned_cols=160  Identities=35%  Similarity=0.504  Sum_probs=141.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh-hHHhh----h-cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA-TMADL----E-QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~-~~~~~----~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+++||++++++|+++|++|+++.|+.+ ..++.    . ...++.++.+|+++.++++++++++.+.++++|++|||+
T Consensus        12 G~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a   91 (245)
T PRK12937         12 GASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGRIDVLVNNA   91 (245)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            89999999999999999999988877543 22222    1 135688999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.++|+.++++|+.+++.++++++|.|.+  .++||++||..+..+.+....|+++|++++.++++++.
T Consensus        92 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~  169 (245)
T PRK12937         92 GVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLAN  169 (245)
T ss_pred             CCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeeccccCCCCCCchhHHHHHHHHHHHHHHHH
Confidence            9877677888899999999999999999999999998853  47999999998888889999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      ++++.||+
T Consensus       170 ~~~~~~i~  177 (245)
T PRK12937        170 ELRGRGIT  177 (245)
T ss_pred             HhhhcCeE
Confidence            99988874

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.7e-28  Score=172.29  Aligned_cols=161  Identities=24%  Similarity=0.322  Sum_probs=139.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHH-HHHHc---CCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSN-VLEKF---GKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-~~~~~---~~id~vi~~ag~   76 (162)
                      ||+||||++++++|+++|++|++++|+.+.........++.++.+|+++.+++++++.+ +.+.+   +++|++|||+|.
T Consensus         8 GasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~   87 (243)
T PRK07023          8 GHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGT   87 (243)
T ss_pred             cCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEEEEcCcc
Confidence            89999999999999999999999999865322122235688899999999999998877 55544   479999999997


Q ss_pred             CCC-CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           77 QCV-GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        77 ~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      ... .++.+.+.++|+..+++|+.+++.+++.+.+.|.+++.++||++||..+..+.++...|+++|++++++++.++.+
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~  167 (243)
T PRK07023         88 VEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAALDHHARAVALD  167 (243)
T ss_pred             cCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHHHHHHHHHHHHhc
Confidence            643 5677889999999999999999999999999998777789999999999999999999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                       .+.|||
T Consensus       168 -~~~~i~  173 (243)
T PRK07023        168 -ANRALR  173 (243)
T ss_pred             -CCCCcE
Confidence             777764

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.96  E-value=7.8e-28  Score=172.08  Aligned_cols=162  Identities=30%  Similarity=0.451  Sum_probs=144.6

Q ss_pred             CCCCchHHHHHHHHHHCCCe-EEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCR-VVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~-vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+++||+.++++|+++|++ |++++|+.+......+     ...+.++.+|+++++++.++++.+.+.++++|++|||+
T Consensus        13 Ga~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~a   92 (260)
T PRK06198         13 GGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAA   92 (260)
T ss_pred             CCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence            89999999999999999998 9999998765543322     24577889999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      |.....++.+.+.+.|+..+++|+.+++.+++.+++.|.+++ .+++|++||..+..+.+....|+++|+++++|+++++
T Consensus        93 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~a  172 (260)
T PRK06198         93 GLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAA  172 (260)
T ss_pred             CcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHHHHHHHHHHHHHH
Confidence            987767777889999999999999999999999999997654 5899999999998888888999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|+...||+
T Consensus       173 ~e~~~~~i~  181 (260)
T PRK06198        173 YALLRNRIR  181 (260)
T ss_pred             HHhcccCeE
Confidence            999988774

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.96  E-value=4.9e-28  Score=172.06  Aligned_cols=162  Identities=31%  Similarity=0.414  Sum_probs=138.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEe-cChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATG-RSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~-r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||.+++++|+++|++|+++. |+.+..+....     ..++.++.||+++.++++.+++++.+.++++|++|||+
T Consensus         9 Gas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~a   88 (248)
T PRK06947          9 GASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLDALVNNA   88 (248)
T ss_pred             CCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            8999999999999999999988764 55554443322     24688999999999999999999999999999999999


Q ss_pred             CCCCC-CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC---CCeEEEeccccccCCCCC-chhhhHhHHHHHHHH
Q 042185           75 GVQCV-GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK---KGKIINVGSVTVAAPGPW-AGTYTASKAALHSLT  149 (162)
Q Consensus        75 g~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~isS~~~~~~~~~-~~~y~~sKaa~~~l~  149 (162)
                      |.... .++.+.+.++|+..+++|+.+++.+++.+++.+..++   .++||++||..+..+.+. ...|+++|+++++|+
T Consensus        89 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~sK~~~~~~~  168 (248)
T PRK06947         89 GIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLT  168 (248)
T ss_pred             ccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhhHHHHHHHH
Confidence            98643 4677889999999999999999999999999886543   578999999888777664 568999999999999


Q ss_pred             HHHHHHhccCCCC
Q 042185          150 DTLRLELGHFGID  162 (162)
Q Consensus       150 ~~l~~e~~~~gi~  162 (162)
                      ++++.++.+.||+
T Consensus       169 ~~la~~~~~~~i~  181 (248)
T PRK06947        169 LGLAKELGPHGVR  181 (248)
T ss_pred             HHHHHHhhhhCcE
Confidence            9999999988875

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.96  E-value=4.9e-28  Score=192.55  Aligned_cols=162  Identities=28%  Similarity=0.410  Sum_probs=147.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||++|||++++++|+++|++|++++|+.+..+....       ...+..+.+|++|.++++.+++++.+++|++|++|||
T Consensus       421 GasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~n  500 (676)
T TIGR02632       421 GGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNN  500 (676)
T ss_pred             CCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEEC
Confidence            899999999999999999999999999876654432       1356788999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTL  152 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l  152 (162)
                      ||.....++.+.+.++|+..+++|+.+++.+++.+++.|++++ +++||++||..+..+.++...|+++|++++++++++
T Consensus       501 AG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~aSKaA~~~l~r~l  580 (676)
T TIGR02632       501 AGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCL  580 (676)
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHHHHHHHHHHHHHHH
Confidence            9987667788889999999999999999999999999997664 579999999999999999999999999999999999


Q ss_pred             HHHhccCCCC
Q 042185          153 RLELGHFGID  162 (162)
Q Consensus       153 ~~e~~~~gi~  162 (162)
                      +.|+++.|||
T Consensus       581 A~el~~~gIr  590 (676)
T TIGR02632       581 AAEGGTYGIR  590 (676)
T ss_pred             HHHhcccCeE
Confidence            9999998875

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=8.2e-28  Score=171.56  Aligned_cols=162  Identities=29%  Similarity=0.396  Sum_probs=141.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh-hHHhh----h-cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA-TMADL----E-QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~-~~~~~----~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+|+||.+++++|+++|++|++++|+.+ ..++.    . ...++.++.+|+++++++.++++++.+.++++|++|||+
T Consensus         9 G~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~a   88 (256)
T PRK12745          9 GGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRIDCLVNNA   88 (256)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            89999999999999999999999998643 22221    1 134688999999999999999999999999999999999


Q ss_pred             CCCC--CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC------CCeEEEeccccccCCCCCchhhhHhHHHHH
Q 042185           75 GVQC--VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK------KGKIINVGSVTVAAPGPWAGTYTASKAALH  146 (162)
Q Consensus        75 g~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~iv~isS~~~~~~~~~~~~y~~sKaa~~  146 (162)
                      |...  ..++.+.+.+.|+..+++|+.+++.+++.+.+.|.++.      .++||++||..+..+.++...|+++|++++
T Consensus        89 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  168 (256)
T PRK12745         89 GVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLS  168 (256)
T ss_pred             ccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccHHHHHHHH
Confidence            9753  34677888999999999999999999999999997654      357999999999988888999999999999


Q ss_pred             HHHHHHHHHhccCCCC
Q 042185          147 SLTDTLRLELGHFGID  162 (162)
Q Consensus       147 ~l~~~l~~e~~~~gi~  162 (162)
                      .|++.++.++.++||+
T Consensus       169 ~~~~~l~~~~~~~gi~  184 (256)
T PRK12745        169 MAAQLFAARLAEEGIG  184 (256)
T ss_pred             HHHHHHHHHHHHhCCE
Confidence            9999999999988874

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.6e-28  Score=192.98  Aligned_cols=162  Identities=30%  Similarity=0.446  Sum_probs=145.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||++++++|+++|++|++++|+.+.++++.+     ..++.++.+|++|.++++.+++++.++++++|++|||||
T Consensus       378 Gas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~li~~Ag  457 (657)
T PRK07201        378 GASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAG  457 (657)
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            899999999999999999999999999887665433     356889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCC--ChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEV--PLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        76 ~~~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      ......+.+.  +.++++..+++|+.+++.+++.++|.|++++.++||++||..+..+.+....|+++|+++++|+++++
T Consensus       458 ~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la  537 (657)
T PRK07201        458 RSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKAALDAFSDVAA  537 (657)
T ss_pred             CCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHHHHHHHHHHHHHH
Confidence            7644443332  25789999999999999999999999988888999999999999988999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|+++.||+
T Consensus       538 ~e~~~~~i~  546 (657)
T PRK07201        538 SETLSDGIT  546 (657)
T ss_pred             HHHHhhCCc
Confidence            999998885

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.6e-28  Score=167.66  Aligned_cols=142  Identities=23%  Similarity=0.367  Sum_probs=129.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||++|||++++++|+++ ++|++++|+..            .+++|+++.++++.++++    ++++|++|||+|.....
T Consensus         7 Gas~giG~~la~~l~~~-~~vi~~~r~~~------------~~~~D~~~~~~~~~~~~~----~~~id~lv~~ag~~~~~   69 (199)
T PRK07578          7 GASGTIGRAVVAELSKR-HEVITAGRSSG------------DVQVDITDPASIRALFEK----VGKVDAVVSAAGKVHFA   69 (199)
T ss_pred             cCCcHHHHHHHHHHHhc-CcEEEEecCCC------------ceEecCCChHHHHHHHHh----cCCCCEEEECCCCCCCC
Confidence            89999999999999999 99999999753            468999999999988765    47999999999987777


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccCC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG  160 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~g  160 (162)
                      ++.+.+.++|++.+++|+.+++.+++.+.|+|++  .++|+++||..+..+.+....|+++|+++++|+++++.|+ ++|
T Consensus        70 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~-~~g  146 (199)
T PRK07578         70 PLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND--GGSFTLTSGILSDEPIPGGASAATVNGALEGFVKAAALEL-PRG  146 (199)
T ss_pred             chhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCeEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHHHHc-cCC
Confidence            7888999999999999999999999999999953  4799999999999999999999999999999999999999 888


Q ss_pred             CC
Q 042185          161 ID  162 (162)
Q Consensus       161 i~  162 (162)
                      ||
T Consensus       147 i~  148 (199)
T PRK07578        147 IR  148 (199)
T ss_pred             eE
Confidence            75

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.1e-27  Score=171.20  Aligned_cols=161  Identities=34%  Similarity=0.460  Sum_probs=143.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc---CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ---DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      ||+|+||++++++|+++|++|++++|+.+..++...   +..+.++.+|+++.+++..+++++.++++++|++||++|..
T Consensus         9 Gat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~   88 (257)
T PRK07074          9 GAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVLVANAGAA   88 (257)
T ss_pred             CCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            899999999999999999999999999877655433   34678899999999999999999999999999999999987


Q ss_pred             CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhc
Q 042185           78 CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                      ...++.+.+.++|+..+.+|+.+++.+.+++.+.+.+++.++||++||..+..+ .+.+.|+.+|++++.++++++.+++
T Consensus        89 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~~~~y~~sK~a~~~~~~~~a~~~~  167 (257)
T PRK07074         89 RAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-LGHPAYSAAKAGLIHYTKLLAVEYG  167 (257)
T ss_pred             CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-CCCcccHHHHHHHHHHHHHHHHHHh
Confidence            666777889999999999999999999999999998777789999999766543 3567899999999999999999999


Q ss_pred             cCCCC
Q 042185          158 HFGID  162 (162)
Q Consensus       158 ~~gi~  162 (162)
                      ++||+
T Consensus       168 ~~gi~  172 (257)
T PRK07074        168 RFGIR  172 (257)
T ss_pred             HhCeE
Confidence            88874

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=6.7e-28  Score=184.68  Aligned_cols=162  Identities=25%  Similarity=0.362  Sum_probs=145.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecC--hhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRS--KATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~--~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||++++++|+++|++|+++++.  .+.++++..+....++.+|+++.++++.+++.+.+.++++|++|||+|+..
T Consensus       217 GasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~~AG~~~  296 (450)
T PRK08261        217 GAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIVVHNAGITR  296 (450)
T ss_pred             cCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCC
Confidence            889999999999999999999999884  344455544455678899999999999999999999999999999999887


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ..++.+.+.+.|+..+++|+.+++.+.+.+.+.+..+++++||++||..+..+.++...|+++|+++++|+++++.++++
T Consensus       297 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asKaal~~~~~~la~el~~  376 (450)
T PRK08261        297 DKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKAGVIGLVQALAPLLAE  376 (450)
T ss_pred             CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHHHHHHHHHHHHHHHHhh
Confidence            77888899999999999999999999999999655456789999999999988899999999999999999999999999


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +||+
T Consensus       377 ~gi~  380 (450)
T PRK08261        377 RGIT  380 (450)
T ss_pred             hCcE
Confidence            8874

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.2e-27  Score=170.57  Aligned_cols=160  Identities=28%  Similarity=0.426  Sum_probs=140.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEE-ecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHc------CCcc
Q 042185            1 CSQGGIGHALARAFAASDCRVVAT-GRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKF------GKID   68 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~-~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~------~~id   68 (162)
                      ||+|+||.++|++|+++|++|++. .|+.+..++..+     ...+.++.+|++|++++..+++++.+++      +++|
T Consensus        13 Gasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~~~~~id   92 (254)
T PRK12746         13 GASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEID   92 (254)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhccccCCCCcc
Confidence            899999999999999999998774 677665443322     2467889999999999999999998887      4799


Q ss_pred             EEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHH
Q 042185           69 VLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSL  148 (162)
Q Consensus        69 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l  148 (162)
                      ++|||+|.....++.+.+.+.|+..+++|+.+++.+++.+.+.|.+  .+++|++||..+..+.++...|+++|++++.+
T Consensus        93 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~v~~sS~~~~~~~~~~~~Y~~sK~a~~~~  170 (254)
T PRK12746         93 ILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA--EGRVINISSAEVRLGFTGSIAYGLSKGALNTM  170 (254)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECCHHhcCCCCCCcchHhhHHHHHHH
Confidence            9999999877777888899999999999999999999999998854  36999999999988889999999999999999


Q ss_pred             HHHHHHHhccCCCC
Q 042185          149 TDTLRLELGHFGID  162 (162)
Q Consensus       149 ~~~l~~e~~~~gi~  162 (162)
                      +++++.++.+.||+
T Consensus       171 ~~~~~~~~~~~~i~  184 (254)
T PRK12746        171 TLPLAKHLGERGIT  184 (254)
T ss_pred             HHHHHHHHhhcCcE
Confidence            99999999888874

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.96  E-value=8.1e-28  Score=171.20  Aligned_cols=158  Identities=38%  Similarity=0.557  Sum_probs=139.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhh--HHhhhc--C----CceeEEEeccCC-hHHHHHHHHHHHHHcCCccEEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKAT--MADLEQ--D----PRFFVQELDVLS-EQSVQNVLSNVLEKFGKIDVLV   71 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~--~~~~~~--~----~~~~~~~~D~~~-~~~i~~~~~~~~~~~~~id~vi   71 (162)
                      ||++|||+++|+.|+++|++|+++.++.+.  .+.+..  .    ....+..+|+++ .++++.+++++.+.+|++|++|
T Consensus        12 Gas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~~g~id~lv   91 (251)
T COG1028          12 GASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEEFGRIDILV   91 (251)
T ss_pred             CCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            899999999999999999998888887543  222222  2    367788899998 9999999999999999999999


Q ss_pred             ECCCCCCC-CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCc-hhhhHhHHHHHHHH
Q 042185           72 NNAGVQCV-GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWA-GTYTASKAALHSLT  149 (162)
Q Consensus        72 ~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-~~y~~sKaa~~~l~  149 (162)
                      ||||.... .++.+.+.++|+..+.+|+.+++.+++.+.|.++++   +||++||..+. +.+.. ..|++||+|+.+|+
T Consensus        92 nnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~~~~~~~Y~~sK~al~~~~  167 (251)
T COG1028          92 NNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GGPPGQAAYAASKAALIGLT  167 (251)
T ss_pred             ECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CCCCCcchHHHHHHHHHHHH
Confidence            99999876 488899999999999999999999999888888733   99999999999 87774 99999999999999


Q ss_pred             HHHHHHhccCCCC
Q 042185          150 DTLRLELGHFGID  162 (162)
Q Consensus       150 ~~l~~e~~~~gi~  162 (162)
                      +.++.|++++||+
T Consensus       168 ~~l~~e~~~~gi~  180 (251)
T COG1028         168 KALALELAPRGIR  180 (251)
T ss_pred             HHHHHHHhhhCcE
Confidence            9999999999875

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.96  E-value=9.9e-28  Score=173.11  Aligned_cols=150  Identities=21%  Similarity=0.261  Sum_probs=127.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |+ ||||+++|++|+ +|++|++++|+.+.+++..+     ..++.++.+|++|+++++++++.+ ++++++|++|||||
T Consensus         9 Ga-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id~li~nAG   85 (275)
T PRK06940          9 GA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGPVTGLVHTAG   85 (275)
T ss_pred             CC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCCCCEEEECCC
Confidence            55 799999999996 89999999999776554432     246788999999999999999988 56899999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC-----------------------
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG-----------------------  132 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------------------  132 (162)
                      ...       ..++|++++++|+.+++.+++.++|.|++  ++++|++||.++..+.                       
T Consensus        86 ~~~-------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (275)
T PRK06940         86 VSP-------SQASPEAILKVDLYGTALVLEEFGKVIAP--GGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPF  156 (275)
T ss_pred             cCC-------chhhHHHHHHHhhHHHHHHHHHHHHHHhh--CCCEEEEEecccccCcccchhhhcccccccccccccccc
Confidence            742       23679999999999999999999999954  3688999998776542                       


Q ss_pred             -------CCchhhhHhHHHHHHHHHHHHHHhccCCCC
Q 042185          133 -------PWAGTYTASKAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       133 -------~~~~~y~~sKaa~~~l~~~l~~e~~~~gi~  162 (162)
                             ++...|++||+|+..++++++.|++++|||
T Consensus       157 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIr  193 (275)
T PRK06940        157 LQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGAR  193 (275)
T ss_pred             ccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeE
Confidence                   246789999999999999999999999986

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.7e-27  Score=168.19  Aligned_cols=161  Identities=29%  Similarity=0.443  Sum_probs=144.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|+||.+++++|+++|++|++++|+++..++..+    ...+.++.+|+++.+++..+++++.+.++++|++||++|.
T Consensus        13 Gatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~   92 (237)
T PRK07326         13 GGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGV   92 (237)
T ss_pred             CCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            899999999999999999999999999876655433    2568889999999999999999999999999999999998


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHh
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                      ....++.+.+.++++..+++|+.+++.+++++++.+ +++.+++|++||..+..+.+....|+.+|+++.++++.++.++
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~~~~~~~~~~  171 (237)
T PRK07326         93 GHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPAL-KRGGGYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDL  171 (237)
T ss_pred             CCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHH-HHCCeEEEEECChhhccCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            777778889999999999999999999999999988 4456899999999888888888999999999999999999999


Q ss_pred             ccCCCC
Q 042185          157 GHFGID  162 (162)
Q Consensus       157 ~~~gi~  162 (162)
                      ...|++
T Consensus       172 ~~~gi~  177 (237)
T PRK07326        172 RQYGIK  177 (237)
T ss_pred             cccCcE
Confidence            888774

>PRK12742 oxidoreductase; Provisional

Probab=99.96  E-value=1.4e-27  Score=168.65  Aligned_cols=156  Identities=29%  Similarity=0.422  Sum_probs=133.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEec-ChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGR-SKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r-~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      ||+||||++++++|+++|++|+++++ +.+..+++..+....++.+|++|.+++.+.+++    ++++|++|||+|....
T Consensus        13 GasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~----~~~id~li~~ag~~~~   88 (237)
T PRK12742         13 GGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRK----SGALDILVVNAGIAVF   88 (237)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHH----hCCCcEEEECCCCCCC
Confidence            89999999999999999999988866 455555554444567888999999888777653    5789999999998766


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccccc-CCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVA-APGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      .+..+.+.++|+..+++|+.+++.+++.+.+.|.  +.+++|++||..+. .+.++...|+++|++++++++.++.++++
T Consensus        89 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~~  166 (237)
T PRK12742         89 GDALELDADDIDRLFKINIHAPYHASVEAARQMP--EGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGP  166 (237)
T ss_pred             CCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHh--cCCeEEEEeccccccCCCCCCcchHHhHHHHHHHHHHHHHHHhh
Confidence            6777888999999999999999999999999884  35799999998874 57788899999999999999999999999


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      .|||
T Consensus       167 ~gi~  170 (237)
T PRK12742        167 RGIT  170 (237)
T ss_pred             hCeE
Confidence            8875

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=2.7e-27  Score=168.39  Aligned_cols=161  Identities=24%  Similarity=0.376  Sum_probs=139.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+++||.+++++|+++|++|++++|+.+.+++..+     ..++.++.+|+++.++++++++.+.+.++++|++|||+|
T Consensus        12 G~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag   91 (253)
T PRK08217         12 GGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNAG   91 (253)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            789999999999999999999999999876554432     346788999999999999999999988899999999999


Q ss_pred             CCCCCC--------C-CCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-CCCeEEEeccccccCCCCCchhhhHhHHHH
Q 042185           76 VQCVGP--------L-AEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKIINVGSVTVAAPGPWAGTYTASKAAL  145 (162)
Q Consensus        76 ~~~~~~--------~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~~~~y~~sKaa~  145 (162)
                      ......        + .+.+.++|+.++++|+.+++.+.+.+++.|.++ ..+.|+++||.. ..+.++...|+++|+++
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~~~~~Y~~sK~a~  170 (253)
T PRK08217         92 ILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNMGQTNYSASKAGV  170 (253)
T ss_pred             ccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCCCCchhHHHHHHH
Confidence            754322        2 567889999999999999999999999998765 457899998864 45667889999999999


Q ss_pred             HHHHHHHHHHhccCCCC
Q 042185          146 HSLTDTLRLELGHFGID  162 (162)
Q Consensus       146 ~~l~~~l~~e~~~~gi~  162 (162)
                      ++++++++.++.+.||+
T Consensus       171 ~~l~~~la~~~~~~~i~  187 (253)
T PRK08217        171 AAMTVTWAKELARYGIR  187 (253)
T ss_pred             HHHHHHHHHHHHHcCcE
Confidence            99999999999888875

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.96  E-value=1.8e-27  Score=169.11  Aligned_cols=162  Identities=29%  Similarity=0.401  Sum_probs=145.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhh----c-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLE----Q-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~----~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|+||.+++++|+++|++|++++|+.+...+..    . ...+.++.+|++|.++++++++++.++++++|++||++|
T Consensus        13 Gasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag   92 (251)
T PRK12826         13 GAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRLDILVANAG   92 (251)
T ss_pred             CCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence            89999999999999999999999999965544332    2 245888999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccccc-CCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVA-APGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      .....++.+.+.++++..++.|+.+++.+++.+.|.|.+++.+++|++||..+. .+.+....|+++|++++.+++.++.
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK~a~~~~~~~~~~  172 (251)
T PRK12826         93 IFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALAL  172 (251)
T ss_pred             CCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHHHHHHHHHHHHHH
Confidence            877777878899999999999999999999999999987778899999999888 7788889999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      ++.+.|++
T Consensus       173 ~~~~~~i~  180 (251)
T PRK12826        173 ELAARNIT  180 (251)
T ss_pred             HHHHcCeE
Confidence            99887764

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=1.5e-27  Score=169.24  Aligned_cols=162  Identities=33%  Similarity=0.490  Sum_probs=146.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEE-ecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVAT-GRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~-~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+|+||.+++++|+++|++|+++ +|+.+..++..+     ..++.++.+|+++.++++++++.+.+.++++|++||++
T Consensus        12 Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~a   91 (247)
T PRK05565         12 GASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNA   91 (247)
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence            899999999999999999999998 998766544322     24578999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.+.|+..+++|+.+++.+++.+.+.+.+++.+++|++||..+..+.+....|+.+|+++..+++.++.
T Consensus        92 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~~~  171 (247)
T PRK05565         92 GISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAK  171 (247)
T ss_pred             CcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHHHHHHHHHHHHHH
Confidence            98766677788999999999999999999999999999887788999999999998888899999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      ++...||+
T Consensus       172 ~~~~~gi~  179 (247)
T PRK05565        172 ELAPSGIR  179 (247)
T ss_pred             HHHHcCeE
Confidence            99888764

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=7.7e-28  Score=169.77  Aligned_cols=152  Identities=32%  Similarity=0.465  Sum_probs=133.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC-C
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC-V   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~-~   79 (162)
                      ||+++||.+++++|+++|++|++++|+....    ....+.++.+|++++      ++++.+.++++|++|||+|... .
T Consensus        12 Gas~~iG~~ia~~l~~~G~~v~~~~r~~~~~----~~~~~~~~~~D~~~~------~~~~~~~~~~id~lv~~ag~~~~~   81 (235)
T PRK06550         12 GAASGIGLAQARAFLAQGAQVYGVDKQDKPD----LSGNFHFLQLDLSDD------LEPLFDWVPSVDILCNTAGILDDY   81 (235)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCcccc----cCCcEEEEECChHHH------HHHHHHhhCCCCEEEECCCCCCCC
Confidence            8999999999999999999999999985432    124578889999887      4555556689999999999753 3


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccC
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHF  159 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~  159 (162)
                      .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.+....|+++|+++++++++++.|+.++
T Consensus        82 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~  161 (235)
T PRK06550         82 KPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKD  161 (235)
T ss_pred             CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHHHHHHHHHHHHHhhhc
Confidence            56778899999999999999999999999999988778999999999999988899999999999999999999999998


Q ss_pred             CCC
Q 042185          160 GID  162 (162)
Q Consensus       160 gi~  162 (162)
                      |||
T Consensus       162 gi~  164 (235)
T PRK06550        162 GIQ  164 (235)
T ss_pred             CeE
Confidence            875

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=2.1e-27  Score=168.77  Aligned_cols=162  Identities=23%  Similarity=0.351  Sum_probs=142.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc------CCceeEEEeccC--ChHHHHHHHHHHHHHcCCccEEEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ------DPRFFVQELDVL--SEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~------~~~~~~~~~D~~--~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      ||+++||.+++++|+++|++|++++|+.+..+++..      ..+..++.+|++  +.++++.+++.+.+.++++|++||
T Consensus        19 G~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~id~vi~   98 (247)
T PRK08945         19 GAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLH   98 (247)
T ss_pred             CCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence            899999999999999999999999999766544322      135667778885  788999999999999999999999


Q ss_pred             CCCCCC-CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHH
Q 042185           73 NAGVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDT  151 (162)
Q Consensus        73 ~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~  151 (162)
                      |||... ..++.+.+.+.|++.+++|+.+++.+++++++.|++.+.++||++||..+..+.+....|+++|++++.|++.
T Consensus        99 ~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~  178 (247)
T PRK08945         99 NAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVSKFATEGMMQV  178 (247)
T ss_pred             CCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccHHHHHHHHHHHHH
Confidence            999753 3567778899999999999999999999999999888889999999999998889999999999999999999


Q ss_pred             HHHHhccCCCC
Q 042185          152 LRLELGHFGID  162 (162)
Q Consensus       152 l~~e~~~~gi~  162 (162)
                      ++.++...||+
T Consensus       179 ~~~~~~~~~i~  189 (247)
T PRK08945        179 LADEYQGTNLR  189 (247)
T ss_pred             HHHHhcccCEE
Confidence            99999988774

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.1e-27  Score=167.45  Aligned_cols=154  Identities=28%  Similarity=0.380  Sum_probs=137.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+++||++++++|+++|++|++++|+.+..      ....++.+|+++.++++.+++++.+.+ ++|++|||+|.....
T Consensus        10 G~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~d~vi~~ag~~~~~   82 (234)
T PRK07577         10 GATKGIGLALSLRLANLGHQVIGIARSAIDD------FPGELFACDLADIEQTAATLAQINEIH-PVDAIVNNVGIALPQ   82 (234)
T ss_pred             CCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------cCceEEEeeCCCHHHHHHHHHHHHHhC-CCcEEEECCCCCCCC
Confidence            8999999999999999999999999986541      123578999999999999999998876 689999999987777


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccCC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG  160 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~g  160 (162)
                      ++.+.+.++|+..+++|+.+++.+.+.++|.|++.+.++||++||.. ..+.+....|+++|+++++|+++++.|+++.|
T Consensus        83 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~-~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~g  161 (234)
T PRK07577         83 PLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAAKSALVGCTRTWALELAEYG  161 (234)
T ss_pred             ChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc-ccCCCCchHHHHHHHHHHHHHHHHHHHHHhhC
Confidence            88888999999999999999999999999999887788999999985 45667788999999999999999999999888


Q ss_pred             CC
Q 042185          161 ID  162 (162)
Q Consensus       161 i~  162 (162)
                      |+
T Consensus       162 i~  163 (234)
T PRK07577        162 IT  163 (234)
T ss_pred             cE
Confidence            75

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.9e-27  Score=169.27  Aligned_cols=162  Identities=20%  Similarity=0.349  Sum_probs=139.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh-hhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCc----cEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK-ATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKI----DVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~-~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i----d~vi~~   73 (162)
                      ||+||||++++++|+++|++|++++|+. +.++++.+  ..++.++.+|+++.++++++++++.+.++..    .++|+|
T Consensus         8 GasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~   87 (251)
T PRK06924          8 GTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVSSIHLINN   87 (251)
T ss_pred             cCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCCceEEEEc
Confidence            8999999999999999999999999986 44444433  3567889999999999999999998776532    278999


Q ss_pred             CCCCC-CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-CCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHH
Q 042185           74 AGVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDT  151 (162)
Q Consensus        74 ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~  151 (162)
                      +|... ..++.+.+.++|+..+++|+.+++.+++.++|.|++. ..++||++||..+..+.++...|+++|+++++|++.
T Consensus        88 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~  167 (251)
T PRK06924         88 AGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAGLDMFTQT  167 (251)
T ss_pred             ceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHHHHHHHHHHH
Confidence            99753 3678889999999999999999999999999999764 357999999999999999999999999999999999


Q ss_pred             HHHHhc--cCCCC
Q 042185          152 LRLELG--HFGID  162 (162)
Q Consensus       152 l~~e~~--~~gi~  162 (162)
                      ++.|++  +.|||
T Consensus       168 la~e~~~~~~~i~  180 (251)
T PRK06924        168 VATEQEEEEYPVK  180 (251)
T ss_pred             HHHHhhhcCCCeE
Confidence            999976  34554

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2e-27  Score=168.46  Aligned_cols=158  Identities=31%  Similarity=0.392  Sum_probs=140.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+++||+++++.|+++|++|++++|+.+..++........++.+|+++.++++.+++.    .+++|++|||+|.....
T Consensus        16 Ga~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~~~~d~vi~~ag~~~~~   91 (245)
T PRK07060         16 GASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAA----AGAFDGLVNCAGIASLE   91 (245)
T ss_pred             CCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHH----hCCCCEEEECCCCCCCC
Confidence            88999999999999999999999999988777665555577889999999888887665    47899999999987777


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHF  159 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~  159 (162)
                      ++.+.+.++|+..+++|+.+++.+++++.+.+++++ .++||++||..+..+.+....|+.+|++++.+++.++.++.+.
T Consensus        92 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~a~~~~~~  171 (245)
T PRK07060         92 SALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGPH  171 (245)
T ss_pred             ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHHHHHHHHHHHHHHHHHhhh
Confidence            777789999999999999999999999999887554 4899999999999999999999999999999999999999888


Q ss_pred             CCC
Q 042185          160 GID  162 (162)
Q Consensus       160 gi~  162 (162)
                      ||+
T Consensus       172 ~i~  174 (245)
T PRK07060        172 GIR  174 (245)
T ss_pred             CeE
Confidence            774

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.7e-27  Score=168.04  Aligned_cols=162  Identities=30%  Similarity=0.438  Sum_probs=142.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecC----hhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRS----KATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLV   71 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~----~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi   71 (162)
                      ||+|+||++++++|+++|++|++++|.    .+..++..+     ...+.++.+|+++.++++.+++++.+.++++|.+|
T Consensus        13 Gasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi   92 (249)
T PRK12827         13 GGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEFGRLDILV   92 (249)
T ss_pred             CCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            899999999999999999999987653    333332221     24678999999999999999999999999999999


Q ss_pred             ECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHH-HhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           72 NNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVV-PHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        72 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~-~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      ||+|.....++.+.+.++|+..+++|+.+++.+++.+. +.+++++.+++|++||..+..+.++...|+.+|++++.+++
T Consensus        93 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~  172 (249)
T PRK12827         93 NNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTK  172 (249)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchhHHHHHHHHHHHH
Confidence            99998877788889999999999999999999999999 66666667899999999999888899999999999999999


Q ss_pred             HHHHHhccCCCC
Q 042185          151 TLRLELGHFGID  162 (162)
Q Consensus       151 ~l~~e~~~~gi~  162 (162)
                      .++.++++.||+
T Consensus       173 ~l~~~~~~~~i~  184 (249)
T PRK12827        173 TLANELAPRGIT  184 (249)
T ss_pred             HHHHHhhhhCcE
Confidence            999999887774

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=1.2e-27  Score=173.80  Aligned_cols=158  Identities=28%  Similarity=0.376  Sum_probs=137.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||++|||+++|+.|+.+|++|++..||.+..+++..       ...+.++++|+++.++|+++.+++.+..+++|++|+|
T Consensus        42 GansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~ldvLInN  121 (314)
T KOG1208|consen   42 GATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPLDVLINN  121 (314)
T ss_pred             CCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCCCccEEEeC
Confidence            899999999999999999999999999866555433       3678889999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC-------------CCCchhhhH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP-------------GPWAGTYTA  140 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-------------~~~~~~y~~  140 (162)
                      ||+.....  ..+.|.++..+.+|+.|++.+++.++|.|++..++|||++||......             ......|+.
T Consensus       122 AGV~~~~~--~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~~~~~~~~~Y~~  199 (314)
T KOG1208|consen  122 AGVMAPPF--SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKAKLYSSDAAYAL  199 (314)
T ss_pred             cccccCCc--ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhccCccchhHHHH
Confidence            99865433  678899999999999999999999999999887899999999765110             222335999


Q ss_pred             hHHHHHHHHHHHHHHhccCCC
Q 042185          141 SKAALHSLTDTLRLELGHFGI  161 (162)
Q Consensus       141 sKaa~~~l~~~l~~e~~~~gi  161 (162)
                      ||-+...+++.|++.+.. ||
T Consensus       200 SKla~~l~~~eL~k~l~~-~V  219 (314)
T KOG1208|consen  200 SKLANVLLANELAKRLKK-GV  219 (314)
T ss_pred             hHHHHHHHHHHHHHHhhc-Cc
Confidence            999999999999999986 65

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.96  E-value=3.2e-27  Score=173.89  Aligned_cols=162  Identities=19%  Similarity=0.179  Sum_probs=134.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||.+++++|+++|++|++++|+.+..+++..     ...+.++.+|+++.++++.+++++.+.++++|++|||||
T Consensus        13 Gas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~li~nAg   92 (322)
T PRK07453         13 GASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPLDALVCNAA   92 (322)
T ss_pred             cCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCc
Confidence            899999999999999999999999999876655432     236788999999999999999998887789999999999


Q ss_pred             CCCC-CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCC--CeEEEeccccccC----------------------
Q 042185           76 VQCV-GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK--GKIINVGSVTVAA----------------------  130 (162)
Q Consensus        76 ~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~iv~isS~~~~~----------------------  130 (162)
                      +... .+..+.+.++|+..+++|+.+++.+++.++|.|++++.  ++||++||.....                      
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (322)
T PRK07453         93 VYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLGDLSGFE  172 (322)
T ss_pred             ccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccchhhhhcch
Confidence            7533 23346788999999999999999999999999987653  6999999965321                      


Q ss_pred             -------------CCCCchhhhHhHHHHHHHHHHHHHHhc-cCCCC
Q 042185          131 -------------PGPWAGTYTASKAALHSLTDTLRLELG-HFGID  162 (162)
Q Consensus       131 -------------~~~~~~~y~~sKaa~~~l~~~l~~e~~-~~gi~  162 (162)
                                   +..+...|+.||.+...+++.+++++. ..||+
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~  218 (322)
T PRK07453        173 AGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGIT  218 (322)
T ss_pred             hcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeE
Confidence                         112345799999999999999999985 45663

>PRK08324 short chain dehydrogenase; Validated

Probab=99.96  E-value=4e-27  Score=187.87  Aligned_cols=162  Identities=31%  Similarity=0.453  Sum_probs=149.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC----CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD----PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|+||++++++|+++|++|++++|+.+.++....+    ..+.++.+|+++.++++.+++++.+.+|++|++|||+|.
T Consensus       429 GasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~  508 (681)
T PRK08324        429 GAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGI  508 (681)
T ss_pred             cCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            7899999999999999999999999998776655432    367899999999999999999999999999999999999


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      ....++.+.+.+.|+..+++|+.+++.+++.+.+.|++++ +++||++||..+..+.++...|+++|++++++++.++.+
T Consensus       509 ~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e  588 (681)
T PRK08324        509 AISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALE  588 (681)
T ss_pred             CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            8888888999999999999999999999999999998766 489999999999999999999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      +++.|||
T Consensus       589 ~~~~gIr  595 (681)
T PRK08324        589 LGPDGIR  595 (681)
T ss_pred             hcccCeE
Confidence            9988875

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=9.2e-27  Score=165.73  Aligned_cols=159  Identities=27%  Similarity=0.358  Sum_probs=138.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecC-hhhHHh----hhc-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRS-KATMAD----LEQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~-~~~~~~----~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+|+||++++++|+++|++|++..|+ .+....    +.. .....++.+|+++++++..+++++.+.++++|++|||+
T Consensus        13 Gasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a   92 (252)
T PRK06077         13 GSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVADILVNNA   92 (252)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            899999999999999999998877654 232222    111 24567889999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.+.++..+++|+.+++.+++.+.|.|++  .+++|++||..++.+.++...|+++|++++++++.++.
T Consensus        93 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~  170 (252)
T PRK06077         93 GLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE--GGAIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLAL  170 (252)
T ss_pred             CCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc--CcEEEEEcchhccCCCCCchHHHHHHHHHHHHHHHHHH
Confidence            9877777878889999999999999999999999999854  47999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |+++ +|+
T Consensus       171 ~~~~-~i~  177 (252)
T PRK06077        171 ELAP-KIR  177 (252)
T ss_pred             HHhc-CCE
Confidence            9987 664

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.95  E-value=7.8e-27  Score=165.60  Aligned_cols=162  Identities=27%  Similarity=0.353  Sum_probs=139.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEE-ecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVAT-GRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~-~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+|+||++++++|+++|++|+++ .|+.+..++...     ...+..+.+|++|+++++++++++.++++++|++|||+
T Consensus         8 Ga~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id~vi~~a   87 (247)
T PRK09730          8 GGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLAALVNNA   87 (247)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECC
Confidence            899999999999999999998764 676655443322     24578899999999999999999999999999999999


Q ss_pred             CCC-CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc---CCCeEEEeccccccCCCCC-chhhhHhHHHHHHHH
Q 042185           75 GVQ-CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR---KKGKIINVGSVTVAAPGPW-AGTYTASKAALHSLT  149 (162)
Q Consensus        75 g~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~iv~isS~~~~~~~~~-~~~y~~sKaa~~~l~  149 (162)
                      |.. ...++.+.+.++|+..+++|+.+++.+++.+++.+.++   +++++|++||..+..+.+. ...|+++|++++.++
T Consensus        88 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK~~~~~~~  167 (247)
T PRK09730         88 GILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLT  167 (247)
T ss_pred             CCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHHHHHHHHH
Confidence            975 44567788999999999999999999999999988765   3578999999988887775 468999999999999


Q ss_pred             HHHHHHhccCCCC
Q 042185          150 DTLRLELGHFGID  162 (162)
Q Consensus       150 ~~l~~e~~~~gi~  162 (162)
                      +.++.++.+.||+
T Consensus       168 ~~l~~~~~~~~i~  180 (247)
T PRK09730        168 TGLSLEVAAQGIR  180 (247)
T ss_pred             HHHHHHHHHhCeE
Confidence            9999999888774

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.95  E-value=7.4e-27  Score=164.27  Aligned_cols=150  Identities=29%  Similarity=0.420  Sum_probs=132.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+++||++++++|+++|++|++++|+.+..+....    ...+.++.+|++++++++.+++++    +++|++|||+|.
T Consensus         4 Gas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~----~~id~li~~ag~   79 (230)
T PRK07041          4 GGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA----GPFDHVVITAAD   79 (230)
T ss_pred             cCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc----CCCCEEEECCCC
Confidence            899999999999999999999999999776655432    356888999999999999988764    789999999998


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHh
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                      ....++.+.+.++|++++++|+.+++.+++  .+.+  .+.++||++||..+..+.++...|+++|+++++|+++++.|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~--~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~  155 (230)
T PRK07041         80 TPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARI--APGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALEL  155 (230)
T ss_pred             CCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhh--cCCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence            777778888999999999999999999999  3444  346899999999999999999999999999999999999998


Q ss_pred             cc
Q 042185          157 GH  158 (162)
Q Consensus       157 ~~  158 (162)
                      .+
T Consensus       156 ~~  157 (230)
T PRK07041        156 AP  157 (230)
T ss_pred             hC
Confidence            65

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.95  E-value=1.3e-26  Score=165.21  Aligned_cols=162  Identities=30%  Similarity=0.481  Sum_probs=145.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|+||++++++|+++|++|++++|+.+..+++.+     ..++.++.+|+++.++++.+++++.+.++++|++||++|
T Consensus         8 Ga~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a~   87 (255)
T TIGR01963         8 GAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDILVNNAG   87 (255)
T ss_pred             CCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            899999999999999999999999999776555433     246888999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....+..+.+.++++.+++.|+.+++.+++.+++.|++.+.+++|++||..+..+.+....|+.+|++++.+++.++.+
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~~~~~~~~~  167 (255)
T TIGR01963        88 IQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALE  167 (255)
T ss_pred             CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHHHHHHHHHHH
Confidence            87666677788899999999999999999999999998777789999999988888888999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      +.+.+|+
T Consensus       168 ~~~~~i~  174 (255)
T TIGR01963       168 VAAHGIT  174 (255)
T ss_pred             hhhcCeE
Confidence            8877653

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK08264 short chain dehydrogenase; Validated

Probab=99.95  E-value=9.8e-27  Score=164.44  Aligned_cols=156  Identities=36%  Similarity=0.466  Sum_probs=140.3

Q ss_pred             CCCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC-CC
Q 042185            1 CSQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV-QC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~-~~   78 (162)
                      ||+|+||+++|++|+++|+ +|++++|+.+..++  ....+.++.+|+++.++++.+++.    ++++|++||++|. ..
T Consensus        13 Ggsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~----~~~id~vi~~ag~~~~   86 (238)
T PRK08264         13 GANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--LGPRVVPLQLDVTDPASVAAAAEA----ASDVTILVNNAGIFRT   86 (238)
T ss_pred             CCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--cCCceEEEEecCCCHHHHHHHHHh----cCCCCEEEECCCcCCC
Confidence            8999999999999999999 99999999876654  335688999999999998887765    3689999999998 55


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ..++.+.+.++++..+++|+.+++.+++++.|.+++.+.+++|++||..+..+.++...|+.+|++++++++.++.++.+
T Consensus        87 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~~  166 (238)
T PRK08264         87 GSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAP  166 (238)
T ss_pred             CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHHHHHHHHHHHHHHHhhh
Confidence            66788889999999999999999999999999998777889999999999998899999999999999999999999988


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      .||+
T Consensus       167 ~~i~  170 (238)
T PRK08264        167 QGTR  170 (238)
T ss_pred             cCeE
Confidence            8764

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1e-26  Score=164.07  Aligned_cols=162  Identities=29%  Similarity=0.459  Sum_probs=144.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc---CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ---DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      ||+|+||.+++++|+++|++|++++|+.+...+...   ......+.+|++|.++++.+++++.+.++++|++||++|..
T Consensus        14 Gatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~   93 (239)
T PRK12828         14 GGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDALVNIAGAF   93 (239)
T ss_pred             CCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCEEEECCccc
Confidence            899999999999999999999999998765433211   23567788999999999999999999999999999999987


Q ss_pred             CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhc
Q 042185           78 CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                      ...++.+.+.++++..+++|+.+++.+++.+.+.+.+++.+++|++||..+..+.+....|+++|++++.+++.++.++.
T Consensus        94 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~a~~~~~~~~a~~~~  173 (239)
T PRK12828         94 VWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELL  173 (239)
T ss_pred             CcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHHHHHHHHHHHHHHHhh
Confidence            66667778899999999999999999999999999877788999999999988888899999999999999999999988


Q ss_pred             cCCCC
Q 042185          158 HFGID  162 (162)
Q Consensus       158 ~~gi~  162 (162)
                      +.||+
T Consensus       174 ~~~i~  178 (239)
T PRK12828        174 DRGIT  178 (239)
T ss_pred             hcCeE
Confidence            77764

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.95  E-value=1.9e-26  Score=162.78  Aligned_cols=162  Identities=30%  Similarity=0.400  Sum_probs=142.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh-hhHHhh----hc-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK-ATMADL----EQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~-~~~~~~----~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      |++++||..++++|+++|++|++++|+. +..+..    .. ...+.++.+|++++++++++++.+.+.++++|++||++
T Consensus         5 G~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~a   84 (239)
T TIGR01830         5 GASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDILVNNA   84 (239)
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence            8999999999999999999999998875 322222    11 23578999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.+.++..+++|+.+++.+++.+.+.+.+++.++++++||..+..+.+....|+++|++++.+++.++.
T Consensus        85 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~~~l~~  164 (239)
T TIGR01830        85 GITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAK  164 (239)
T ss_pred             CCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHHHHHHHH
Confidence            98766667778899999999999999999999999998777778999999998888889999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      ++...|++
T Consensus       165 ~~~~~g~~  172 (239)
T TIGR01830       165 ELASRNIT  172 (239)
T ss_pred             HHhhcCeE
Confidence            98877763

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.95  E-value=9.3e-27  Score=164.87  Aligned_cols=162  Identities=30%  Similarity=0.461  Sum_probs=145.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|+||.+++++|+++|++|++++|+++..+....     ..++.++.+|+++++++..+++++.+.++++|++||++|
T Consensus        12 Gasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag   91 (246)
T PRK05653         12 GASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNAG   91 (246)
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence            899999999999999999999999999876554322     356888999999999999999999998999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....+..+.+.++++..++.|+.+++.+++.+.+.+.+.+.++||++||..+..+.+....|+.+|++++.++++++.+
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~~~~~l~~~  171 (246)
T PRK05653         92 ITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALE  171 (246)
T ss_pred             cCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHHHHHHHHHHHHHH
Confidence            87777777889999999999999999999999999997777789999999988888888899999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      +.+.|++
T Consensus       172 ~~~~~i~  178 (246)
T PRK05653        172 LASRGIT  178 (246)
T ss_pred             HhhcCeE
Confidence            9877764

>PRK08017 oxidoreductase; Provisional

Probab=99.95  E-value=2.1e-26  Score=164.31  Aligned_cols=161  Identities=34%  Similarity=0.461  Sum_probs=145.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHc-CCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF-GKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~id~vi~~ag~~~~   79 (162)
                      ||+|+||.+++++|+++|++|++++|+.++++.+.+ ..+.++.+|+++.++++.+++.+.... +++|.+||++|....
T Consensus         9 Gasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ag~~~~   87 (256)
T PRK08017          9 GCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS-LGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNAGFGVY   87 (256)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh-CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECCCCCCc
Confidence            899999999999999999999999999887766543 347788999999999999999887654 689999999998766


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccC
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHF  159 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~  159 (162)
                      .++.+.+.++++..+++|+.+++.+++.+++.+++.+.+++|++||..+..+.+....|+++|++++.+++.++.++.+.
T Consensus        88 ~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~  167 (256)
T PRK08017         88 GPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRHS  167 (256)
T ss_pred             cchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHHHHHHHHHHHhhc
Confidence            77888899999999999999999999999999987777899999999898888999999999999999999999999888


Q ss_pred             CCC
Q 042185          160 GID  162 (162)
Q Consensus       160 gi~  162 (162)
                      ||+
T Consensus       168 ~i~  170 (256)
T PRK08017        168 GIK  170 (256)
T ss_pred             CCE
Confidence            874

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.95  E-value=6.9e-27  Score=164.09  Aligned_cols=159  Identities=26%  Similarity=0.347  Sum_probs=136.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC-
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV-   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~-   79 (162)
                      ||+++||.+++++|+++|++|++++|+.+..+++.+...+.+..+|++|+++++++++++.+  +++|++|||+|.... 
T Consensus         8 G~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~--~~id~vi~~ag~~~~~   85 (225)
T PRK08177          8 GASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQG--QRFDLLFVNAGISGPA   85 (225)
T ss_pred             CCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhc--CCCCEEEEcCcccCCC
Confidence            89999999999999999999999999987666554445678889999999999999998854  589999999998633 


Q ss_pred             -CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC---CCCchhhhHhHHHHHHHHHHHHHH
Q 042185           80 -GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP---GPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        80 -~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                       .++.+.+.++++..+.+|+.+++.+.+.+.+.++. ..+.++++||..+..+   .+....|+++|++++.|++.++.|
T Consensus        86 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e  164 (225)
T PRK08177         86 HQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRP-GQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRSFVAE  164 (225)
T ss_pred             CCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhh-cCCEEEEEccCccccccCCCCCccchHHHHHHHHHHHHHHHHH
Confidence             45677889999999999999999999999998864 3478999998766543   345678999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      ++++||+
T Consensus       165 ~~~~~i~  171 (225)
T PRK08177        165 LGEPTLT  171 (225)
T ss_pred             hhcCCeE
Confidence            9998875

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.6e-26  Score=165.60  Aligned_cols=162  Identities=35%  Similarity=0.482  Sum_probs=143.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc---CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ---DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      ||+|+||++++++|+++|++|++++|+.+..+++.+   +.++.++.+|+++++++..+++++.+.++++|+|||++|..
T Consensus        18 Ga~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~   97 (264)
T PRK12829         18 GGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIA   97 (264)
T ss_pred             CCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence            899999999999999999999999999876665433   23568899999999999999999999999999999999987


Q ss_pred             -CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCC-CeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           78 -CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK-GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        78 -~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                       ...++.+.+.++|+..+++|+.+++.+++.+++.+...+. +.++++||..+..+.+....|+.+|++++.+++.++.+
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~~K~a~~~~~~~l~~~  177 (264)
T PRK12829         98 GPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIE  177 (264)
T ss_pred             CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHHHHHHHHHHHHHHHHH
Confidence             5566778899999999999999999999999998876655 78999999888888888899999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      +...+|+
T Consensus       178 ~~~~~i~  184 (264)
T PRK12829        178 LGPLGIR  184 (264)
T ss_pred             HhhcCeE
Confidence            8776653

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.4e-26  Score=165.32  Aligned_cols=156  Identities=31%  Similarity=0.525  Sum_probs=138.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|+||++++++|+++|++|++++|+.+..+++.+     ...+.++.+|++|.++++..+.      +++|++|||+|
T Consensus         9 Gasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~id~vi~~ag   82 (257)
T PRK09291          9 GAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WDVDVLLNNAG   82 (257)
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CCCCEEEECCC
Confidence            899999999999999999999999998776554432     2467889999999988777643      38999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      ....+++.+.+.+.++..+++|+.+++.+++.+++.+.+.+.++||++||..+..+.++...|+++|++++.+++.++.+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~  162 (257)
T PRK09291         83 IGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAE  162 (257)
T ss_pred             cCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHHHHHHHHHHH
Confidence            88778888899999999999999999999999999998777789999999988888888899999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      +.+.||+
T Consensus       163 ~~~~gi~  169 (257)
T PRK09291        163 LKPFGIQ  169 (257)
T ss_pred             HHhcCcE
Confidence            9888874

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=6.4e-26  Score=160.76  Aligned_cols=162  Identities=33%  Similarity=0.498  Sum_probs=143.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh-hHHhhh-----cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA-TMADLE-----QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~-~~~~~~-----~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+|+||++++++|+++|++|+++.|+.+ ..+...     ...++.++.+|+++.++++.+++++.+.++++|.+||++
T Consensus        13 Gasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~a   92 (249)
T PRK12825         13 GAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRIDILVNNA   92 (249)
T ss_pred             CCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            89999999999999999999887666543 222221     135688999999999999999999999889999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.++++..+++|+.+++.+++.+.+.+++.+.+++|++||..+..+.+....|+.+|++++++++.++.
T Consensus        93 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~~~~~~~~~~~~  172 (249)
T PRK12825         93 GIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALAR  172 (249)
T ss_pred             ccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence            98777777788999999999999999999999999999877788999999999998888899999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      ++.+.||+
T Consensus       173 ~~~~~~i~  180 (249)
T PRK12825        173 ELAEYGIT  180 (249)
T ss_pred             HHhhcCeE
Confidence            99887764

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.95  E-value=3.2e-26  Score=155.37  Aligned_cols=161  Identities=27%  Similarity=0.420  Sum_probs=133.9

Q ss_pred             CCCCchHHHHHHHHHHC-CCeE-EEEecChhh-HHhhh----cCCceeEEEeccCChHHHHHHHHHHHHHc--CCccEEE
Q 042185            1 CSQGGIGHALARAFAAS-DCRV-VATGRSKAT-MADLE----QDPRFFVQELDVLSEQSVQNVLSNVLEKF--GKIDVLV   71 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~-g~~v-i~~~r~~~~-~~~~~----~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--~~id~vi   71 (162)
                      ||++|||..++++|.+. |-.+ +.+.|+++. .++.+    .+.+++.+++|+++.+++..+++++.+--  ..+|++|
T Consensus        10 GaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~GlnlLi   89 (249)
T KOG1611|consen   10 GANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSDGLNLLI   89 (249)
T ss_pred             ccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccCCceEEE
Confidence            89999999999999976 6655 556676776 33332    36899999999999999999999999874  4799999


Q ss_pred             ECCCCC-CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCC-----------CeEEEeccccccCC---CCCch
Q 042185           72 NNAGVQ-CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK-----------GKIINVGSVTVAAP---GPWAG  136 (162)
Q Consensus        72 ~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-----------~~iv~isS~~~~~~---~~~~~  136 (162)
                      +|||+. ......+.+.+.|.+.+++|..+++.++|+++|++++...           +.||++||..+..+   ..+..
T Consensus        90 nNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~~~~~~~~  169 (249)
T KOG1611|consen   90 NNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGGFRPGGLS  169 (249)
T ss_pred             eccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCCCCCcchh
Confidence            999986 3456667788999999999999999999999999986543           48999998766543   24567


Q ss_pred             hhhHhHHHHHHHHHHHHHHhccCCC
Q 042185          137 TYTASKAALHSLTDTLRLELGHFGI  161 (162)
Q Consensus       137 ~y~~sKaa~~~l~~~l~~e~~~~gi  161 (162)
                      +|.+||+|++.|+|+++.|+++.+|
T Consensus       170 AYrmSKaAlN~f~ksls~dL~~~~i  194 (249)
T KOG1611|consen  170 AYRMSKAALNMFAKSLSVDLKDDHI  194 (249)
T ss_pred             hhHhhHHHHHHHHHHhhhhhcCCcE
Confidence            8999999999999999999998765

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.95  E-value=7.1e-26  Score=160.52  Aligned_cols=162  Identities=31%  Similarity=0.416  Sum_probs=143.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhh-HHhh----h-cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKAT-MADL----E-QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~-~~~~----~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+|+||.+++++|+++|++|+++.|+.+. .+..    . ...++.++.+|+++.+++..+++++.+.++++|++||++
T Consensus        12 G~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a   91 (248)
T PRK05557         12 GASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNA   91 (248)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            899999999999999999999887776542 2221    1 235678899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.+.++..+++|+.+++.+.+.+.+.+.+.+.+++|++||..+..+.+....|+++|++++.+++.++.
T Consensus        92 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk~a~~~~~~~~a~  171 (248)
T PRK05557         92 GITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLAR  171 (248)
T ss_pred             CcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHHHHHHHHHHHHHH
Confidence            98777777788999999999999999999999999999877778999999998888888899999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      ++++.||+
T Consensus       172 ~~~~~~i~  179 (248)
T PRK05557        172 ELASRGIT  179 (248)
T ss_pred             HhhhhCeE
Confidence            99887764

>PRK09135 pteridine reductase; Provisional

Probab=99.95  E-value=1.3e-25  Score=159.36  Aligned_cols=157  Identities=29%  Similarity=0.411  Sum_probs=136.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh-hHHhhh----c--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA-TMADLE----Q--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~-~~~~~~----~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+|+||++++++|+++|++|++++|+.+ ..+...    +  ...+.++.+|+++.+++..+++.+.+.++++|++|||
T Consensus        13 Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~   92 (249)
T PRK09135         13 GGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGRLDALVNN   92 (249)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            89999999999999999999999998643 232221    1  2357889999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      +|.....++.+.+.++++..+++|+.+++.+++++.|.+.++ .+.+++++|..+..+.++...|+.+|++++.+++.++
T Consensus        93 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~l~  171 (249)
T PRK09135         93 ASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ-RGAIVNITDIHAERPLKGYPVYCAAKAALEMLTRSLA  171 (249)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC-CeEEEEEeChhhcCCCCCchhHHHHHHHHHHHHHHHH
Confidence            998776777778889999999999999999999999988654 4788888887777888889999999999999999999


Q ss_pred             HHhcc
Q 042185          154 LELGH  158 (162)
Q Consensus       154 ~e~~~  158 (162)
                      .++.+
T Consensus       172 ~~~~~  176 (249)
T PRK09135        172 LELAP  176 (249)
T ss_pred             HHHCC
Confidence            99864

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.95  E-value=5.9e-26  Score=160.22  Aligned_cols=155  Identities=23%  Similarity=0.240  Sum_probs=126.7

Q ss_pred             CCCCchHHHHHHHHHHCC--CeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASD--CRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g--~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||+++|++|+++|  ..|++..|+....   ....++.++++|+++.++++.+.    ++++++|++|||+|...
T Consensus         7 Gas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~~~Dls~~~~~~~~~----~~~~~id~li~~aG~~~   79 (235)
T PRK09009          7 GGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---FQHDNVQWHALDVTDEAEIKQLS----EQFTQLDWLINCVGMLH   79 (235)
T ss_pred             CCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---cccCceEEEEecCCCHHHHHHHH----HhcCCCCEEEECCcccc
Confidence            899999999999999985  5677777754321   12356788999999999888753    45689999999999864


Q ss_pred             ------CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC---CCCCchhhhHhHHHHHHHH
Q 042185           79 ------VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA---PGPWAGTYTASKAALHSLT  149 (162)
Q Consensus        79 ------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~---~~~~~~~y~~sKaa~~~l~  149 (162)
                            ..++.+.+.+.|+..+++|+.+++.+++.++|.|++++.++++++||..+..   +.+++..|+++|+++++|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y~asK~a~~~~~  159 (235)
T PRK09009         80 TQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYRASKAALNMFL  159 (235)
T ss_pred             ccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchhhhhHHHHHHHH
Confidence                  2356778899999999999999999999999999877678999999865532   3456779999999999999


Q ss_pred             HHHHHHhcc--CCCC
Q 042185          150 DTLRLELGH--FGID  162 (162)
Q Consensus       150 ~~l~~e~~~--~gi~  162 (162)
                      ++|+.|+++  .+||
T Consensus       160 ~~la~e~~~~~~~i~  174 (235)
T PRK09009        160 KTLSIEWQRSLKHGV  174 (235)
T ss_pred             HHHHHHhhcccCCeE
Confidence            999999986  4553

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.2e-24  Score=154.54  Aligned_cols=149  Identities=19%  Similarity=0.227  Sum_probs=111.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh-hhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK-ATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~-~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      ||+||||++++++|+++|++|++++|+. +..+... +....++.+|+++.++++.       .++++|++|||||... 
T Consensus        21 Gas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~-------~~~~iDilVnnAG~~~-   91 (245)
T PRK12367         21 GASGALGKALTKAFRAKGAKVIGLTHSKINNSESND-ESPNEWIKWECGKEESLDK-------QLASLDVLILNHGINP-   91 (245)
T ss_pred             cCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc-cCCCeEEEeeCCCHHHHHH-------hcCCCCEEEECCccCC-
Confidence            8999999999999999999999999986 3222222 2223678899999887653       4578999999999743 


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc---CCCeEEEeccccccCCCCCchhhhHhHHHHHHHH---HHHH
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR---KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLT---DTLR  153 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~---~~l~  153 (162)
                        ..+.+.++|+..+++|+.+++.+++.++|.|+++   +++.+++.+|..+..+ +....|++||+|+..+.   +.++
T Consensus        92 --~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y~aSKaal~~~~~l~~~l~  168 (245)
T PRK12367         92 --GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSYEISKRLIGQLVSLKKNLL  168 (245)
T ss_pred             --cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchhHHHHHHHHHHHHHHHHHH
Confidence              2346789999999999999999999999999763   2334545556555544 45678999999986544   3444


Q ss_pred             HHhccCCC
Q 042185          154 LELGHFGI  161 (162)
Q Consensus       154 ~e~~~~gi  161 (162)
                      .|+.+.||
T Consensus       169 ~e~~~~~i  176 (245)
T PRK12367        169 DKNERKKL  176 (245)
T ss_pred             Hhhccccc
Confidence            44455555

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=1.7e-24  Score=152.94  Aligned_cols=158  Identities=22%  Similarity=0.249  Sum_probs=135.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|+||.++++.|+++|++|++++|+.+..+++..    ...+.++.+|+++.++++.+++++...++++|.+|+++|.
T Consensus        12 Ga~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ii~~ag~   91 (238)
T PRK05786         12 GVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAIDGLVVTVGG   91 (238)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEEcCCC
Confidence            899999999999999999999999999876655422    2467889999999999999999998888999999999987


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccccc-CCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVA-APGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      ....++.  +.+.++.++++|+.+++.+.+.+.|.+++  ++++|++||..+. .+.+....|+++|++++.+++.++.+
T Consensus        92 ~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~~Y~~sK~~~~~~~~~~~~~  167 (238)
T PRK05786         92 YVEDTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASE  167 (238)
T ss_pred             cCCCchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchhcccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence            5444443  33889999999999999999999998853  4799999998764 46677888999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      +...||+
T Consensus       168 ~~~~gi~  174 (238)
T PRK05786        168 LLGRGIR  174 (238)
T ss_pred             HhhcCeE
Confidence            9887764

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.93  E-value=5.8e-27  Score=153.26  Aligned_cols=162  Identities=27%  Similarity=0.374  Sum_probs=143.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||.+|+|++.+++|+++|+.|++.|-...+-++...  ..++.+...|++++++++..+...+.+||++|..+||||+..
T Consensus        16 ggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~vncagia~   95 (260)
T KOG1199|consen   16 GGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDALVNCAGIAY   95 (260)
T ss_pred             cCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeeeeeccceee
Confidence            788999999999999999999999987665554443  367899999999999999999999999999999999999842


Q ss_pred             C------CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc------CCCeEEEeccccccCCCCCchhhhHhHHHHH
Q 042185           79 V------GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR------KKGKIINVGSVTVAAPGPWAGTYTASKAALH  146 (162)
Q Consensus        79 ~------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~  146 (162)
                      -      .+-...+.+++++.+++|+.+++++++.-..+|-..      +.|.||+..|.+++.+..++.+|++||+++.
T Consensus        96 a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gqaaysaskgaiv  175 (260)
T KOG1199|consen   96 AFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQAAYSASKGAIV  175 (260)
T ss_pred             eeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccchhhhhcccCceE
Confidence            2      233346789999999999999999999998888543      3589999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCCC
Q 042185          147 SLTDTLRLELGHFGID  162 (162)
Q Consensus       147 ~l~~~l~~e~~~~gi~  162 (162)
                      +|+--++++++..|||
T Consensus       176 gmtlpiardla~~gir  191 (260)
T KOG1199|consen  176 GMTLPIARDLAGDGIR  191 (260)
T ss_pred             eeechhhhhcccCceE
Confidence            9999999999999987

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.93  E-value=7.3e-25  Score=155.74  Aligned_cols=154  Identities=27%  Similarity=0.260  Sum_probs=126.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh-hHHhhh----c-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA-TMADLE----Q-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~-~~~~~~----~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+||||++++++|+++|++|++++|+.+ ..+.+.    . ..++.++.+|+++.++++.+++++.+.++.+|++|||+
T Consensus        13 GasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a   92 (248)
T PRK07806         13 GSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGLDALVLNA   92 (248)
T ss_pred             CCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCcEEEECC
Confidence            89999999999999999999999998753 232221    1 24578899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccccc-----CCCCCchhhhHhHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVA-----APGPWAGTYTASKAALHSLT  149 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-----~~~~~~~~y~~sKaa~~~l~  149 (162)
                      |......      .+++..+++|+.+++.+++.+.|.|.+  .+++|++||..+.     .+.+....|+.+|++++.++
T Consensus        93 g~~~~~~------~~~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK~a~e~~~  164 (248)
T PRK07806         93 SGGMESG------MDEDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQAHFIPTVKTMPEYEPVARSKRAGEDAL  164 (248)
T ss_pred             CCCCCCC------CCcceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchhhcCccccCCccccHHHHHHHHHHHHH
Confidence            8643211      124678899999999999999998843  4799999986443     23455678999999999999


Q ss_pred             HHHHHHhccCCCC
Q 042185          150 DTLRLELGHFGID  162 (162)
Q Consensus       150 ~~l~~e~~~~gi~  162 (162)
                      +.++.|+++.|||
T Consensus       165 ~~l~~~~~~~~i~  177 (248)
T PRK07806        165 RALRPELAEKGIG  177 (248)
T ss_pred             HHHHHHhhccCeE
Confidence            9999999998885

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.93  E-value=7e-24  Score=148.58  Aligned_cols=153  Identities=27%  Similarity=0.325  Sum_probs=128.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC--
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC--   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~--   78 (162)
                      ||+|+||++++++|+++|++|++++|+.+..+++.. ....++.+|+++.++++++++++..  +++|++||++|...  
T Consensus         8 G~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~--~~~d~vi~~ag~~~~~   84 (222)
T PRK06953          8 GASRGIGREFVRQYRADGWRVIATARDAAALAALQA-LGAEALALDVADPASVAGLAWKLDG--EALDAAVYVAGVYGPR   84 (222)
T ss_pred             cCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh-ccceEEEecCCCHHHHHHHHHHhcC--CCCCEEEECCCcccCC
Confidence            899999999999999999999999999877666543 2456889999999999998877642  47999999999753  


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCc---hhhhHhHHHHHHHHHHHHHH
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWA---GTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~---~~y~~sKaa~~~l~~~l~~e  155 (162)
                      ..+..+.+.++|+..+++|+.+++.+++.+.|.|.+ ..+++++++|..+..+....   ..|+++|++++.+++.++.+
T Consensus        85 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~  163 (222)
T PRK06953         85 TEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEA-AGGVLAVLSSRMGSIGDATGTTGWLYRASKAALNDALRAASLQ  163 (222)
T ss_pred             CCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhc-cCCeEEEEcCcccccccccCCCccccHHhHHHHHHHHHHHhhh
Confidence            345667789999999999999999999999998854 46799999998776553322   35999999999999999988


Q ss_pred             hc
Q 042185          156 LG  157 (162)
Q Consensus       156 ~~  157 (162)
                      +.
T Consensus       164 ~~  165 (222)
T PRK06953        164 AR  165 (222)
T ss_pred             cc
Confidence            74

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.4e-23  Score=147.22  Aligned_cols=153  Identities=30%  Similarity=0.482  Sum_probs=133.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      ||+|+||++++++|+++ ++|++++|+.+..+++... ..+.++.+|++|.++++++++.+    +++|++||++|....
T Consensus        10 G~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~----~~id~vi~~ag~~~~   84 (227)
T PRK08219         10 GASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQL----GRLDVLVHNAGVADL   84 (227)
T ss_pred             cCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhc----CCCCEEEECCCcCCC
Confidence            89999999999999999 9999999998776554322 35788999999999988887654    589999999998766


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccC
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHF  159 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~  159 (162)
                      .+..+.+.++|+..+++|+.+++.+.+.+++.++++ .+++|++||..+..+.++...|+.+|++++.+++.++.++...
T Consensus        85 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~~~~~~~~~~~~~  163 (227)
T PRK08219         85 GPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANPGWGSYAASKFALRALADALREEEPGN  163 (227)
T ss_pred             CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCCCCchHHHHHHHHHHHHHHHHHHhcCC
Confidence            677788899999999999999999999999988755 5799999999999888889999999999999999999887653

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.91  E-value=5.4e-23  Score=139.97  Aligned_cols=158  Identities=21%  Similarity=0.304  Sum_probs=142.0

Q ss_pred             CCchHHHHHHHHHHCCCeEEEEecChhh---HHhhhcC-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            3 QGGIGHALARAFAASDCRVVATGRSKAT---MADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~~vi~~~r~~~~---~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      .+.|+..||+.|.++|++++++..++..   .+++.++ ....+++||+++.+++..++.++.+++|++|.+||+-++.+
T Consensus        17 ~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g~lD~lVHsIaFa~   96 (259)
T COG0623          17 NRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAP   96 (259)
T ss_pred             cccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhCcccEEEEEeccCC
Confidence            5689999999999999999999988643   3333333 35678999999999999999999999999999999999876


Q ss_pred             C----CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           79 V----GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        79 ~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      .    +++.+.+.+.|...+++..++...+.+++.|.|  ..+|+|+.++-..+....|++..-+.+|+++++-+|.|+.
T Consensus        97 k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM--~~ggSiltLtYlgs~r~vPnYNvMGvAKAaLEasvRyLA~  174 (259)
T COG0623          97 KEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLM--NNGGSILTLTYLGSERVVPNYNVMGVAKAALEASVRYLAA  174 (259)
T ss_pred             hHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhc--CCCCcEEEEEeccceeecCCCchhHHHHHHHHHHHHHHHH
Confidence            3    678889999999999999999999999999999  4579999999988889999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      +++++|||
T Consensus       175 dlG~~gIR  182 (259)
T COG0623         175 DLGKEGIR  182 (259)
T ss_pred             HhCccCeE
Confidence            99999997

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.91  E-value=4.6e-23  Score=138.91  Aligned_cols=151  Identities=23%  Similarity=0.281  Sum_probs=129.1

Q ss_pred             CCCCchHHHHHHHHHHCCC-eEEEEecChhhHH-------hhhc-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEE
Q 042185            1 CSQGGIGHALARAFAASDC-RVVATGRSKATMA-------DLEQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLV   71 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~-------~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi   71 (162)
                      ||+++||.+++++|+++|+ .|++++|+.+..+       +++. ..++.++.+|++++++++.+++++.+.++++|.+|
T Consensus         7 Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   86 (180)
T smart00822        7 GGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLGPLRGVI   86 (180)
T ss_pred             cCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCeeEEE
Confidence            8999999999999999997 6888888754322       2222 35677899999999999999999998899999999


Q ss_pred             ECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHH
Q 042185           72 NNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDT  151 (162)
Q Consensus        72 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~  151 (162)
                      |++|.....++.+.+.++++..+++|+.+++.+.+.+.+    .+.++++++||..+..+.+....|+++|+++..+++.
T Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~~~~~  162 (180)
T smart00822       87 HAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD----LPLDFFVLFSSVAGVLGNPGQANYAAANAFLDALAAH  162 (180)
T ss_pred             EccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc----CCcceEEEEccHHHhcCCCCchhhHHHHHHHHHHHHH
Confidence            999987666778889999999999999999999998733    4457999999999988989999999999999999987


Q ss_pred             HHHH
Q 042185          152 LRLE  155 (162)
Q Consensus       152 l~~e  155 (162)
                      ++.+
T Consensus       163 ~~~~  166 (180)
T smart00822      163 RRAR  166 (180)
T ss_pred             HHhc
Confidence            6543

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.90  E-value=3.6e-23  Score=146.71  Aligned_cols=134  Identities=31%  Similarity=0.340  Sum_probs=114.6

Q ss_pred             HHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCChHH
Q 042185           10 LARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSA   89 (162)
Q Consensus        10 ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~   89 (162)
                      +|++|+++|++|++++|+.+..+      ...++.+|++|.++++++++++.   +++|++|||||....        ++
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~------~~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~~--------~~   63 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT------LDGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGT--------AP   63 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh------hhHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCCC--------CC
Confidence            47899999999999999876542      13567899999999999988874   689999999997421        35


Q ss_pred             HHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC---------------------------CCCCchhhhHhH
Q 042185           90 MEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA---------------------------PGPWAGTYTASK  142 (162)
Q Consensus        90 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~---------------------------~~~~~~~y~~sK  142 (162)
                      ++..+++|+.+++.+++.++|.|.+  .|+||++||..++.                           +.++...|+++|
T Consensus        64 ~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  141 (241)
T PRK12428         64 VELVARVNFLGLRHLTEALLPRMAP--GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSK  141 (241)
T ss_pred             HHHhhhhchHHHHHHHHHHHHhccC--CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHH
Confidence            8899999999999999999998853  48999999988763                           556778999999


Q ss_pred             HHHHHHHHHHH-HHhccCCCC
Q 042185          143 AALHSLTDTLR-LELGHFGID  162 (162)
Q Consensus       143 aa~~~l~~~l~-~e~~~~gi~  162 (162)
                      +++.+|++.++ .|++++|||
T Consensus       142 ~a~~~~~~~la~~e~~~~gir  162 (241)
T PRK12428        142 EALILWTMRQAQPWFGARGIR  162 (241)
T ss_pred             HHHHHHHHHHHHHhhhccCeE
Confidence            99999999999 999998885

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.90  E-value=1.8e-22  Score=137.38  Aligned_cols=151  Identities=28%  Similarity=0.412  Sum_probs=119.1

Q ss_pred             CCCCchHHHHHHHHHHCCC-eEEEEecChh-------hHHhhhc-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEE
Q 042185            1 CSQGGIGHALARAFAASDC-RVVATGRSKA-------TMADLEQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLV   71 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-~vi~~~r~~~-------~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi   71 (162)
                      ||.||||..++++|+++|. +|++++|+..       .++++.. ..++.+++||++|+++++++++++.+++++++.||
T Consensus         7 GG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~i~gVi   86 (181)
T PF08659_consen    7 GGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGPIDGVI   86 (181)
T ss_dssp             TTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-EEEEE
T ss_pred             CCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCCcceee
Confidence            7899999999999999987 8999999831       2223332 57899999999999999999999999999999999


Q ss_pred             ECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHH
Q 042185           72 NNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDT  151 (162)
Q Consensus        72 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~  151 (162)
                      |++|.....++.+.+.++++.++...+.+.+.+.+.+.+    .+...+|++||.++..+.+++..|+++.++++.|++.
T Consensus        87 h~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~l~~~i~~SSis~~~G~~gq~~YaaAN~~lda~a~~  162 (181)
T PF08659_consen   87 HAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN----RPLDFFILFSSISSLLGGPGQSAYAAANAFLDALARQ  162 (181)
T ss_dssp             E-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TTTSEEEEEEEHHHHTT-TTBHHHHHHHHHHHHHHHH
T ss_pred             eeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc----CCCCeEEEECChhHhccCcchHhHHHHHHHHHHHHHH
Confidence            999998888999999999999999999999999888754    4456999999999999999999999999999999997


Q ss_pred             HHHH
Q 042185          152 LRLE  155 (162)
Q Consensus       152 l~~e  155 (162)
                      .+..
T Consensus       163 ~~~~  166 (181)
T PF08659_consen  163 RRSR  166 (181)
T ss_dssp             HHHT
T ss_pred             HHhC
Confidence            6653

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.90  E-value=7.4e-22  Score=148.33  Aligned_cols=147  Identities=20%  Similarity=0.279  Sum_probs=113.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||+||||++++++|+++|++|++++|+.+.+++...  ......+.+|++|.+++.+.       ++++|++|||||...
T Consensus       185 GASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~-------l~~IDiLInnAGi~~  257 (406)
T PRK07424        185 GASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAEL-------LEKVDILIINHGINV  257 (406)
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHH-------hCCCCEEEECCCcCC
Confidence            899999999999999999999999998776544322  23466888999998876543       368999999999753


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCC----CeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK----GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~----~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      .   .+.+.+++++.+++|+.+++.+++.++|.|++++.    +.+|++|+ +.. ..+..+.|++||+|+.+|+. +++
T Consensus       258 ~---~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~-~~~~~~~Y~ASKaAl~~l~~-l~~  331 (406)
T PRK07424        258 H---GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEV-NPAFSPLYELSKRALGDLVT-LRR  331 (406)
T ss_pred             C---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-ccc-cCCCchHHHHHHHHHHHHHH-HHH
Confidence            3   36788999999999999999999999999976542    34555554 333 33456789999999999985 444


Q ss_pred             HhccCC
Q 042185          155 ELGHFG  160 (162)
Q Consensus       155 e~~~~g  160 (162)
                      +..+.+
T Consensus       332 ~~~~~~  337 (406)
T PRK07424        332 LDAPCV  337 (406)
T ss_pred             hCCCCc
Confidence            433433

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.89  E-value=2.5e-23  Score=141.39  Aligned_cols=160  Identities=24%  Similarity=0.250  Sum_probs=130.2

Q ss_pred             CCCCchHHHHHHHHHHCCCe--EEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCR--VVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~--vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+|+|||..+++.+..++-.  +....|.....+.++.  .........|++...-++++++...+.+++.|++|||||.
T Consensus        13 GaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~iiI~NAG~   92 (253)
T KOG1204|consen   13 GASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKRDIIIHNAGS   92 (253)
T ss_pred             cCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCceeEEEecCCC
Confidence            89999999999988877654  4444454333222221  2344455567788777888888888899999999999998


Q ss_pred             CCC-CCC--CCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHH
Q 042185           77 QCV-GPL--AEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTL  152 (162)
Q Consensus        77 ~~~-~~~--~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l  152 (162)
                      ..+ ...  +..+.++|++.++.|+++++.+.+.++|.+++.+ ++.+|++||.+...|.+.+..||++|+|.++|++.|
T Consensus        93 lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~KaAr~m~f~~l  172 (253)
T KOG1204|consen   93 LGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSSKAARNMYFMVL  172 (253)
T ss_pred             ccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhhHHHHHHHHHHH
Confidence            654 333  3778999999999999999999999999998774 799999999999999999999999999999999999


Q ss_pred             HHHhccCCC
Q 042185          153 RLELGHFGI  161 (162)
Q Consensus       153 ~~e~~~~gi  161 (162)
                      +.|-. ++|
T Consensus       173 A~EEp-~~v  180 (253)
T KOG1204|consen  173 ASEEP-FDV  180 (253)
T ss_pred             hhcCc-cce
Confidence            99875 554

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.89  E-value=1.3e-21  Score=170.51  Aligned_cols=153  Identities=17%  Similarity=0.158  Sum_probs=132.4

Q ss_pred             CCCCchHHHHHHHHHHC-CCeEEEEecChh--------------h-----------------------------------
Q 042185            1 CSQGGIGHALARAFAAS-DCRVVATGRSKA--------------T-----------------------------------   30 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~-g~~vi~~~r~~~--------------~-----------------------------------   30 (162)
                      ||++|||.++|++|+++ |++|++++|+..              .                                   
T Consensus      2004 GGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~~~~~ei~ 2083 (2582)
T TIGR02813      2004 GGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPVLSSLEIA 2083 (2582)
T ss_pred             CCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccccchhHHHH
Confidence            89999999999999998 699999999820              0                                   


Q ss_pred             --HHhhh-cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHH
Q 042185           31 --MADLE-QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQA  107 (162)
Q Consensus        31 --~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~  107 (162)
                        ++.+. ....+.++.||++|.++++++++++.+. ++||++|||||+.....+.+.+.++|++++++|+.|.+.++++
T Consensus      2084 ~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~a 2162 (2582)
T TIGR02813      2084 QALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAA 2162 (2582)
T ss_pred             HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence              00011 1246789999999999999999999877 6899999999998888899999999999999999999999998


Q ss_pred             HHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185          108 VVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus       108 ~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      +.+.+    .++||++||..+..+.+++..|+++|++++.|++.++.++..
T Consensus      2163 l~~~~----~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~~ 2209 (2582)
T TIGR02813      2163 LNAEN----IKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNPS 2209 (2582)
T ss_pred             HHHhC----CCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence            86643    357999999999999999999999999999999999998743

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.88  E-value=6.3e-22  Score=136.69  Aligned_cols=161  Identities=20%  Similarity=0.294  Sum_probs=137.7

Q ss_pred             CCCCchHHHHHHHHHHCC-----CeEEEEecChhhHHhhhc---------CCceeEEEeccCChHHHHHHHHHHHHHcCC
Q 042185            1 CSQGGIGHALARAFAASD-----CRVVATGRSKATMADLEQ---------DPRFFVQELDVLSEQSVQNVLSNVLEKFGK   66 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g-----~~vi~~~r~~~~~~~~~~---------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   66 (162)
                      |++||||.++|++|.+..     .++++++|+.++.+++..         ...+.++.+|+++..++.++.+++.++|.+
T Consensus        10 GanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di~~rf~~   89 (341)
T KOG1478|consen   10 GANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDIKQRFQR   89 (341)
T ss_pred             cCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHHHHHhhh
Confidence            899999999999999763     368899999888776533         367889999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCC---------------------------CCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCe
Q 042185           67 IDVLVNNAGVQCVGPL---------------------------AEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK  119 (162)
Q Consensus        67 id~vi~~ag~~~~~~~---------------------------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~  119 (162)
                      +|.++.|||..+...+                           ...+.|++...++.|++|++++++.+.|++..+++..
T Consensus        90 ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll~~~~~~~  169 (341)
T KOG1478|consen   90 LDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLLCHSDNPQ  169 (341)
T ss_pred             ccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHhhcCCCCe
Confidence            9999999998543211                           1247889999999999999999999999998887779


Q ss_pred             EEEeccccccC---------CCCCchhhhHhHHHHHHHHHHHHHHhccCCC
Q 042185          120 IINVGSVTVAA---------PGPWAGTYTASKAALHSLTDTLRLELGHFGI  161 (162)
Q Consensus       120 iv~isS~~~~~---------~~~~~~~y~~sKaa~~~l~~~l~~e~~~~gi  161 (162)
                      +|.+||..+..         -..+..+|.+||.+.+-|.-.+.+.+.+.|+
T Consensus       170 lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~  220 (341)
T KOG1478|consen  170 LVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGI  220 (341)
T ss_pred             EEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccch
Confidence            99999987653         3456778999999999999999999988776

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.81  E-value=2.7e-18  Score=126.73  Aligned_cols=144  Identities=20%  Similarity=0.267  Sum_probs=111.7

Q ss_pred             CCCCchHHHHHHHHHHCC--CeEEEEecChhhHHhhhc---CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASD--CRVVATGRSKATMADLEQ---DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g--~~vi~~~r~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|+||++++++|+++|  ++|++++|+......+..   ...+.++.+|++|.+++..+++       .+|+|||+||
T Consensus        11 GatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~-------~iD~Vih~Ag   83 (324)
T TIGR03589        11 GGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALR-------GVDYVVHAAA   83 (324)
T ss_pred             CCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHh-------cCCEEEECcc
Confidence            899999999999999986  689999988654433222   2467889999999988877654       4799999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .... +..+.+   .+..+++|+.+++.+++++.+    .+.++||++||.....|   ...|+++|++.+.+++.++.+
T Consensus        84 ~~~~-~~~~~~---~~~~~~~Nv~g~~~ll~aa~~----~~~~~iV~~SS~~~~~p---~~~Y~~sK~~~E~l~~~~~~~  152 (324)
T TIGR03589        84 LKQV-PAAEYN---PFECIRTNINGAQNVIDAAID----NGVKRVVALSTDKAANP---INLYGATKLASDKLFVAANNI  152 (324)
T ss_pred             cCCC-chhhcC---HHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeCCCCCCC---CCHHHHHHHHHHHHHHHHHhh
Confidence            7432 222222   356899999999999999865    34569999999765443   467999999999999998887


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      ++..|++
T Consensus       153 ~~~~gi~  159 (324)
T TIGR03589       153 SGSKGTR  159 (324)
T ss_pred             ccccCcE
Confidence            7777764

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.80  E-value=3.4e-18  Score=127.34  Aligned_cols=146  Identities=18%  Similarity=0.179  Sum_probs=113.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhh----hcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADL----EQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~----~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|+||.++++.|+++|++|++++|+.+.....    .....+.++.+|+++.+++..++++.     ++|+|||+|+.
T Consensus        11 GatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vih~A~~   85 (349)
T TIGR02622        11 GHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEF-----KPEIVFHLAAQ   85 (349)
T ss_pred             CCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhc-----CCCEEEECCcc
Confidence            8999999999999999999999999876543222    11235677899999999998888875     68999999995


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC------------CCCCchhhhHhHHH
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA------------PGPWAGTYTASKAA  144 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~------------~~~~~~~y~~sKaa  144 (162)
                      ...    ..+.+++...+++|+.+++.+++++.+ .  ...+++|++||...+.            +..+...|+.+|.+
T Consensus        86 ~~~----~~~~~~~~~~~~~N~~g~~~ll~a~~~-~--~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~  158 (349)
T TIGR02622        86 PLV----RKSYADPLETFETNVMGTVNLLEAIRA-I--GSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKAC  158 (349)
T ss_pred             ccc----ccchhCHHHHHHHhHHHHHHHHHHHHh-c--CCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHH
Confidence            322    334566778899999999999998743 1  2246999999965432            12345679999999


Q ss_pred             HHHHHHHHHHHhcc
Q 042185          145 LHSLTDTLRLELGH  158 (162)
Q Consensus       145 ~~~l~~~l~~e~~~  158 (162)
                      .+.+++.++.++.+
T Consensus       159 ~e~~~~~~~~~~~~  172 (349)
T TIGR02622       159 AELVIASYRSSFFG  172 (349)
T ss_pred             HHHHHHHHHHHhhc
Confidence            99999999887744

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK06720 hypothetical protein; Provisional

Probab=99.79  E-value=5.6e-18  Score=113.81  Aligned_cols=126  Identities=16%  Similarity=0.162  Sum_probs=100.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||.++|+.|+++|++|++++|+.+..++...     .....++.+|+++.++++++++++.+.+|++|++|||||
T Consensus        23 Ga~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDilVnnAG  102 (169)
T PRK06720         23 GGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRIDMLFQNAG  102 (169)
T ss_pred             cCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            789999999999999999999999998776544322     245667899999999999999999999999999999999


Q ss_pred             CCCCC-CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-------CCeEEEecccccc
Q 042185           76 VQCVG-PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-------KGKIINVGSVTVA  129 (162)
Q Consensus        76 ~~~~~-~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~~~iv~isS~~~~  129 (162)
                      ..... ++.+.+.++ ++  .+|+.+.++.++.+.+.|.+++       .|++.++|+....
T Consensus       103 ~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (169)
T PRK06720        103 LYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS  161 (169)
T ss_pred             cCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence            86643 343434444 44  6677788889999988876643       5888999886543

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.78  E-value=3.8e-17  Score=120.80  Aligned_cols=159  Identities=16%  Similarity=0.140  Sum_probs=121.1

Q ss_pred             CCCCchHHH--HHHHHHHCCCeEEEEecChhh---------------HHhh-hc-CCceeEEEeccCChHHHHHHHHHHH
Q 042185            1 CSQGGIGHA--LARAFAASDCRVVATGRSKAT---------------MADL-EQ-DPRFFVQELDVLSEQSVQNVLSNVL   61 (162)
Q Consensus         1 Ga~~giG~~--ia~~l~~~g~~vi~~~r~~~~---------------~~~~-~~-~~~~~~~~~D~~~~~~i~~~~~~~~   61 (162)
                      |+++|||.+  +|+.| ++|++|+++++..+.               .++. .. ......+.||+++.++++++++++.
T Consensus        48 GaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~~lie~I~  126 (398)
T PRK13656         48 GASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQKVIELIK  126 (398)
T ss_pred             CCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            899999999  89999 999998888753211               2222 22 2356788999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCC-----------------C-----------------CCCChHHHHHHHHhhhh-hHHHHHH
Q 042185           62 EKFGKIDVLVNNAGVQCVGP-----------------L-----------------AEVPLSAMEQTFNTNVF-GPMRLVQ  106 (162)
Q Consensus        62 ~~~~~id~vi~~ag~~~~~~-----------------~-----------------~~~~~~~~~~~~~~n~~-~~~~~~~  106 (162)
                      +.+|++|++|||++......                 +                 ...+.++++.++++.-. ....+++
T Consensus       127 e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vMggedw~~Wi~  206 (398)
T PRK13656        127 QDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVMGGEDWELWID  206 (398)
T ss_pred             HhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhhccchHHHHHH
Confidence            99999999999999863211                 1                 13456677776665544 3344555


Q ss_pred             HH--HHhHhhcCCCeEEEeccccccCCCCCc--hhhhHhHHHHHHHHHHHHHHhccCCCC
Q 042185          107 AV--VPHMAYRKKGKIINVGSVTVAAPGPWA--GTYTASKAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       107 ~~--~~~~~~~~~~~iv~isS~~~~~~~~~~--~~y~~sKaa~~~l~~~l~~e~~~~gi~  162 (162)
                      ++  .+.|  .+++++|-+|.......+|.+  ..-+.+|++++.-++.|+.+|++.|||
T Consensus       207 al~~a~ll--a~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~gir  264 (398)
T PRK13656        207 ALDEAGVL--AEGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGD  264 (398)
T ss_pred             HHHhcccc--cCCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCE
Confidence            54  3334  457899999998877777766  377999999999999999999999986

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.76  E-value=4e-17  Score=121.16  Aligned_cols=148  Identities=22%  Similarity=0.189  Sum_probs=111.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhh-----HHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKAT-----MADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVL   70 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~-----~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~v   70 (162)
                      ||+|+||.+++++|+++|++|++++|+.+.     ++.+..     ...+.++.+|++|.+++..+++..     .+|+|
T Consensus        13 GatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~V   87 (340)
T PLN02653         13 GITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI-----KPDEV   87 (340)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc-----CCCEE
Confidence            899999999999999999999999886532     222211     235788999999999999988876     69999


Q ss_pred             EECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCC----------CCCchhhh
Q 042185           71 VNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAP----------GPWAGTYT  139 (162)
Q Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~----------~~~~~~y~  139 (162)
                      ||+|+.....    ...+..+..+++|+.++..+++++.+...+++ ..++|++||.+.+..          ..+...|+
T Consensus        88 ih~A~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~~Y~  163 (340)
T PLN02653         88 YNLAAQSHVA----VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETTPFHPRSPYA  163 (340)
T ss_pred             EECCcccchh----hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCCCCCCCChhH
Confidence            9999974321    22344577789999999999999887654321 127888887643321          12356799


Q ss_pred             HhHHHHHHHHHHHHHHhc
Q 042185          140 ASKAALHSLTDTLRLELG  157 (162)
Q Consensus       140 ~sKaa~~~l~~~l~~e~~  157 (162)
                      .||.+.+.+++.++.+++
T Consensus       164 ~sK~~~e~~~~~~~~~~~  181 (340)
T PLN02653        164 VAKVAAHWYTVNYREAYG  181 (340)
T ss_pred             HHHHHHHHHHHHHHHHcC
Confidence            999999999999987764

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.76  E-value=3.6e-17  Score=120.68  Aligned_cols=142  Identities=14%  Similarity=0.139  Sum_probs=109.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhh---c----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLE---Q----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~---~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+|+||++++++|+++|++|++++|+.+......   .    ..++.++.+|+++.++++++++       .+|+|||+
T Consensus        12 G~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vih~   84 (325)
T PLN02989         12 GASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------GCETVFHT   84 (325)
T ss_pred             CCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------CCCEEEEe
Confidence            89999999999999999999999888765433211   1    1357889999999988877764       47999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCC--------------------
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGP--------------------  133 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------------------  133 (162)
                      ||....    ..+.+.+...+++|+.+++.+++++.+.+   +.++||++||..++.+..                    
T Consensus        85 A~~~~~----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~  157 (325)
T PLN02989         85 ASPVAI----TVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFA  157 (325)
T ss_pred             CCCCCC----CCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhheecCCccCCCCCccCcCCCCchhHh
Confidence            996421    23445688999999999999999987643   246999999986643211                    


Q ss_pred             --CchhhhHhHHHHHHHHHHHHHHh
Q 042185          134 --WAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus       134 --~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                        ....|+.+|.+.+.+++.++.+.
T Consensus       158 ~~~~~~Y~~sK~~~E~~~~~~~~~~  182 (325)
T PLN02989        158 EERKQWYVLSKTLAEDAAWRFAKDN  182 (325)
T ss_pred             cccccchHHHHHHHHHHHHHHHHHc
Confidence              02469999999999998877654

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.74  E-value=1.7e-16  Score=118.36  Aligned_cols=148  Identities=20%  Similarity=0.265  Sum_probs=109.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeE-EEEecChhh--HHhh---hcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRV-VATGRSKAT--MADL---EQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~v-i~~~r~~~~--~~~~---~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+|+||.++++.|.++|+.+ ++.++..+.  ....   .....+.++.+|++|.+++++++++.     ++|+|||+|
T Consensus         8 GatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~D~Vih~A   82 (355)
T PRK10217          8 GGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEH-----QPDCVMHLA   82 (355)
T ss_pred             cCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhc-----CCCEEEECC
Confidence            899999999999999999874 455554221  1111   12235778899999999988887763     699999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHh---h--cCCCeEEEeccccccC-------------CCCCch
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMA---Y--RKKGKIINVGSVTVAA-------------PGPWAG  136 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~--~~~~~iv~isS~~~~~-------------~~~~~~  136 (162)
                      |....    ..+.++++..+++|+.++..+++++.+.+.   .  ++..++|++||...+.             +..+..
T Consensus        83 ~~~~~----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s  158 (355)
T PRK10217         83 AESHV----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSS  158 (355)
T ss_pred             cccCc----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCC
Confidence            86432    234466789999999999999999977532   1  1235899999864332             223456


Q ss_pred             hhhHhHHHHHHHHHHHHHHhc
Q 042185          137 TYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus       137 ~y~~sKaa~~~l~~~l~~e~~  157 (162)
                      .|+.||.+.+.+++.++++++
T Consensus       159 ~Y~~sK~~~e~~~~~~~~~~~  179 (355)
T PRK10217        159 PYSASKASSDHLVRAWLRTYG  179 (355)
T ss_pred             hhHHHHHHHHHHHHHHHHHhC
Confidence            799999999999999887754

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.74  E-value=2.1e-16  Score=117.41  Aligned_cols=146  Identities=19%  Similarity=0.171  Sum_probs=109.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh-----hHHhhhc------CCceeEEEeccCChHHHHHHHHHHHHHcCCccE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA-----TMADLEQ------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDV   69 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~-----~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~   69 (162)
                      ||+|+||.+++++|+++|++|++++|+.+     .+..+..      ...+.++.+|++|.+++.++++..     ++|+
T Consensus         7 GatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~   81 (343)
T TIGR01472         7 GITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI-----KPTE   81 (343)
T ss_pred             cCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC-----CCCE
Confidence            89999999999999999999999998753     2222211      235789999999999998888876     6899


Q ss_pred             EEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC-----------CCCCchhh
Q 042185           70 LVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA-----------PGPWAGTY  138 (162)
Q Consensus        70 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~~y  138 (162)
                      |||+|+......    ..+.-...+++|+.++..+++++.+.-. .+..++|++||...+.           +..+...|
T Consensus        82 ViH~Aa~~~~~~----~~~~~~~~~~~n~~gt~~ll~a~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y  156 (343)
T TIGR01472        82 IYNLAAQSHVKV----SFEIPEYTADVDGIGTLRLLEAVRTLGL-IKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPY  156 (343)
T ss_pred             EEECCcccccch----hhhChHHHHHHHHHHHHHHHHHHHHhCC-CcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChh
Confidence            999999743321    2222356778899999999999866311 1124799999875432           12245679


Q ss_pred             hHhHHHHHHHHHHHHHHh
Q 042185          139 TASKAALHSLTDTLRLEL  156 (162)
Q Consensus       139 ~~sKaa~~~l~~~l~~e~  156 (162)
                      +.||.+.+.+++.++.++
T Consensus       157 ~~sK~~~e~~~~~~~~~~  174 (343)
T TIGR01472       157 AAAKLYAHWITVNYREAY  174 (343)
T ss_pred             HHHHHHHHHHHHHHHHHh
Confidence            999999999999988765

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.74  E-value=2.4e-16  Score=121.99  Aligned_cols=143  Identities=18%  Similarity=0.156  Sum_probs=109.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--------------CCceeEEEeccCChHHHHHHHHHHHHHcCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--------------DPRFFVQELDVLSEQSVQNVLSNVLEKFGK   66 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--------------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   66 (162)
                      ||+|+||++++++|+++|++|++++|+.+.++.+..              ..++.++.+|+++.++++.       .++.
T Consensus        87 GATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~-------aLgg  159 (576)
T PLN03209         87 GATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP-------ALGN  159 (576)
T ss_pred             CCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH-------HhcC
Confidence            899999999999999999999999999877654322              1247889999999887754       3467


Q ss_pred             ccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccccc-CCCCCchhhhHhHHHH
Q 042185           67 IDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVA-APGPWAGTYTASKAAL  145 (162)
Q Consensus        67 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-~~~~~~~~y~~sKaa~  145 (162)
                      +|+||||+|....      ...++...+++|+.+...+++++.+    .+.++||++||..+. .+.+.. .|. +|+++
T Consensus       160 iDiVVn~AG~~~~------~v~d~~~~~~VN~~Gt~nLl~Aa~~----agVgRIV~VSSiga~~~g~p~~-~~~-sk~~~  227 (576)
T PLN03209        160 ASVVICCIGASEK------EVFDVTGPYRIDYLATKNLVDAATV----AKVNHFILVTSLGTNKVGFPAA-ILN-LFWGV  227 (576)
T ss_pred             CCEEEEccccccc------cccchhhHHHHHHHHHHHHHHHHHH----hCCCEEEEEccchhcccCcccc-chh-hHHHH
Confidence            8999999986432      1224778889999999988888644    455799999998764 222222 244 78888


Q ss_pred             HHHHHHHHHHhccCCCC
Q 042185          146 HSLTDTLRLELGHFGID  162 (162)
Q Consensus       146 ~~l~~~l~~e~~~~gi~  162 (162)
                      ..+.+.+..++...||+
T Consensus       228 ~~~KraaE~~L~~sGIr  244 (576)
T PLN03209        228 LCWKRKAEEALIASGLP  244 (576)
T ss_pred             HHHHHHHHHHHHHcCCC
Confidence            88888888888888875

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.73  E-value=2.4e-16  Score=111.54  Aligned_cols=145  Identities=22%  Similarity=0.263  Sum_probs=120.7

Q ss_pred             CCCCchHHHHHHHHHHCC--CeEEEEec-----ChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASD--CRVVATGR-----SKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g--~~vi~~~r-----~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||.|.||.++++++.++.  .+|+.+|+     +.+.+..+....+..+++.|++|.+.+.+++++-     ++|+|+|-
T Consensus         7 GGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~-----~~D~Vvhf   81 (340)
T COG1088           7 GGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEY-----QPDAVVHF   81 (340)
T ss_pred             cCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhc-----CCCeEEEe
Confidence            899999999999999874  35788876     6677777777889999999999999888888775     89999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccccc-------------CCCCCchhhhH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVA-------------APGPWAGTYTA  140 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-------------~~~~~~~~y~~  140 (162)
                      |+-..    .+.+.++-+..+++|+.|++.++.+...+..+   -+++.||.-..+             .|..+.++|++
T Consensus        82 AAESH----VDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSA  154 (340)
T COG1088          82 AAESH----VDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK---FRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSA  154 (340)
T ss_pred             chhcc----ccccccChhhhhhcchHHHHHHHHHHHHhccc---ceEEEeccccccccccCCCCCcccCCCCCCCCCcch
Confidence            98543    45677778889999999999999998776632   489999875433             24456788999


Q ss_pred             hHHHHHHHHHHHHHHhc
Q 042185          141 SKAALHSLTDTLRLELG  157 (162)
Q Consensus       141 sKaa~~~l~~~l~~e~~  157 (162)
                      |||+.++|++++.+.++
T Consensus       155 SKAasD~lVray~~TYg  171 (340)
T COG1088         155 SKAASDLLVRAYVRTYG  171 (340)
T ss_pred             hhhhHHHHHHHHHHHcC
Confidence            99999999999998876

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.71  E-value=6.7e-16  Score=118.19  Aligned_cols=147  Identities=13%  Similarity=0.096  Sum_probs=108.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh--------------------hHHhhh--cCCceeEEEeccCChHHHHHHHH
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA--------------------TMADLE--QDPRFFVQELDVLSEQSVQNVLS   58 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~--------------------~~~~~~--~~~~~~~~~~D~~~~~~i~~~~~   58 (162)
                      ||+|+||++++++|+++|++|+++++...                    .++...  ...++.++.+|++|.++++.+++
T Consensus        54 GatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~~v~~~l~  133 (442)
T PLN02572         54 GGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFEFLSEAFK  133 (442)
T ss_pred             CCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHHHHHHHHH
Confidence            89999999999999999999999874211                    010000  12357899999999999998888


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC-------
Q 042185           59 NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP-------  131 (162)
Q Consensus        59 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-------  131 (162)
                      +.     ++|+|||+|+... .+....+.++++..+++|+.+++.+++++...   ....++|++||...+..       
T Consensus       134 ~~-----~~D~ViHlAa~~~-~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~---gv~~~~V~~SS~~vYG~~~~~~~E  204 (442)
T PLN02572        134 SF-----EPDAVVHFGEQRS-APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF---APDCHLVKLGTMGEYGTPNIDIEE  204 (442)
T ss_pred             hC-----CCCEEEECCCccc-ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh---CCCccEEEEecceecCCCCCCCcc
Confidence            75     7899999997532 23344455677888999999999999987542   11248999998765421       


Q ss_pred             -----------------CCCchhhhHhHHHHHHHHHHHHHHh
Q 042185          132 -----------------GPWAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus       132 -----------------~~~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                                       ..+...|+.+|.+.+.+++.++..+
T Consensus       205 ~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~  246 (442)
T PLN02572        205 GYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW  246 (442)
T ss_pred             cccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhc
Confidence                             1123479999999999998877654

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.70  E-value=9.1e-16  Score=113.82  Aligned_cols=141  Identities=15%  Similarity=0.129  Sum_probs=104.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHh------hhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMAD------LEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~------~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+|+||++++++|+++|++|+++.|+.+....      ......+.++.+|++|.+++..+++       ++|+|||+|
T Consensus        16 G~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A   88 (338)
T PLN00198         16 GGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIA-------GCDLVFHVA   88 (338)
T ss_pred             CCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHh-------cCCEEEEeC
Confidence            899999999999999999999988887543322      1111357889999999988776654       579999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC-----------------------
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP-----------------------  131 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------------------  131 (162)
                      +...   .  ...+.+...+++|+.++..+++++.+.   .+.+++|++||.+.+.+                       
T Consensus        89 ~~~~---~--~~~~~~~~~~~~nv~g~~~ll~a~~~~---~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~  160 (338)
T PLN00198         89 TPVN---F--ASEDPENDMIKPAIQGVHNVLKACAKA---KSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTS  160 (338)
T ss_pred             CCCc---c--CCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhh
Confidence            8531   1  112334567899999999999997552   23469999999765532                       


Q ss_pred             -CCCchhhhHhHHHHHHHHHHHHHHh
Q 042185          132 -GPWAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus       132 -~~~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                       .++...|+.||.+.+.+++.++.++
T Consensus       161 ~~~p~~~Y~~sK~~~E~~~~~~~~~~  186 (338)
T PLN00198        161 EKPPTWGYPASKTLAEKAAWKFAEEN  186 (338)
T ss_pred             cCCccchhHHHHHHHHHHHHHHHHhc
Confidence             1234569999999999999887754

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.70  E-value=1.9e-15  Score=112.75  Aligned_cols=146  Identities=15%  Similarity=0.142  Sum_probs=106.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhh----cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLE----QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~----~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|+||++++++|+++|++|++++|+.+..+...    ....+.++.+|+++.+++..++.       .+|+|||+|+.
T Consensus        17 G~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~Vih~A~~   89 (353)
T PLN02896         17 GATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVK-------GCDGVFHVAAS   89 (353)
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHc-------CCCEEEECCcc
Confidence            89999999999999999999999999865443322    12467889999999988777653       47999999997


Q ss_pred             CCCCC-CCCCChHHH--HHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC---------------------
Q 042185           77 QCVGP-LAEVPLSAM--EQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG---------------------  132 (162)
Q Consensus        77 ~~~~~-~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------------  132 (162)
                      ..... ....+.+.+  ...+++|+.++..+++++.+.   ...++||++||...+...                     
T Consensus        90 ~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~  166 (353)
T PLN02896         90 MEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKS---KTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHV  166 (353)
T ss_pred             ccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhc---CCccEEEEEechhhccccccCCCCCCccCcccCCcHHHh
Confidence            54321 112233333  456778889999999987553   124689999997654311                     


Q ss_pred             ----CCchhhhHhHHHHHHHHHHHHHHh
Q 042185          133 ----PWAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus       133 ----~~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                          +....|+.||.+.+.+++.++.++
T Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~  194 (353)
T PLN02896        167 WNTKASGWVYVLSKLLTEEAAFKYAKEN  194 (353)
T ss_pred             hccCCCCccHHHHHHHHHHHHHHHHHHc
Confidence                011379999999999999887654

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.69  E-value=1.2e-15  Score=113.61  Aligned_cols=148  Identities=18%  Similarity=0.240  Sum_probs=107.9

Q ss_pred             CCCCchHHHHHHHHHHCCCe-EEEEecCh-----hhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCR-VVATGRSK-----ATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~-vi~~~r~~-----~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+|+||.+++++|+++|++ |+.+++..     +....+..+..+.++.+|++|.+++++++++.     .+|+|||+|
T Consensus         7 GgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A   81 (352)
T PRK10084          7 GGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQH-----QPDAVMHLA   81 (352)
T ss_pred             CCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhc-----CCCEEEECC
Confidence            89999999999999999986 55566532     11111112345678899999999998888763     799999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-----CCCeEEEeccccccCC------------------
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-----KKGKIINVGSVTVAAP------------------  131 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~~------------------  131 (162)
                      +.....    ...++.+..+++|+.++..+++++.+.|...     +..++|++||...+..                  
T Consensus        82 ~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E  157 (352)
T PRK10084         82 AESHVD----RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTE  157 (352)
T ss_pred             cccCCc----chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccc
Confidence            964321    1223456789999999999999998765321     2348999998643321                  


Q ss_pred             ---CCCchhhhHhHHHHHHHHHHHHHHhc
Q 042185          132 ---GPWAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus       132 ---~~~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                         ..+...|+.+|.+.+.+++.++.+++
T Consensus       158 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g  186 (352)
T PRK10084        158 TTAYAPSSPYSASKASSDHLVRAWLRTYG  186 (352)
T ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHHhC
Confidence               12345799999999999999887754

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.69  E-value=1.7e-15  Score=107.66  Aligned_cols=144  Identities=21%  Similarity=0.188  Sum_probs=113.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||.|.||++.|.+|++.|+.|+++|.-.....+........++..|+.|.+.+.+++.+.     +||.|||.||....+
T Consensus         7 GGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~-----~idaViHFAa~~~Vg   81 (329)
T COG1087           7 GGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEEN-----KIDAVVHFAASISVG   81 (329)
T ss_pred             cCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhc-----CCCEEEECccccccc
Confidence            899999999999999999999999985544333332222789999999999999988886     999999999975443


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC-----------CCCCchhhhHhHHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA-----------PGPWAGTYTASKAALHSLT  149 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~~y~~sKaa~~~l~  149 (162)
                          -+.+.-.+.++.|+.+++.|++++    ++.+..+|||-||.+.+.           +..+..+|+.||...+.+.
T Consensus        82 ----ESv~~Pl~Yy~NNv~gTl~Ll~am----~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL  153 (329)
T COG1087          82 ----ESVQNPLKYYDNNVVGTLNLIEAM----LQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEIL  153 (329)
T ss_pred             ----hhhhCHHHHHhhchHhHHHHHHHH----HHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHH
Confidence                355667899999999999999885    445556777777665442           2234568999999999999


Q ss_pred             HHHHHHhc
Q 042185          150 DTLRLELG  157 (162)
Q Consensus       150 ~~l~~e~~  157 (162)
                      +.+++...
T Consensus       154 ~d~~~a~~  161 (329)
T COG1087         154 RDAAKANP  161 (329)
T ss_pred             HHHHHhCC
Confidence            98887654

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.68  E-value=2.2e-15  Score=110.33  Aligned_cols=145  Identities=23%  Similarity=0.291  Sum_probs=107.2

Q ss_pred             CCCCchHHHHHHHHHHCC--CeEEEEecCh-----hhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASD--CRVVATGRSK-----ATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g--~~vi~~~r~~-----~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+|+||.+++++|+++|  ++|++++|..     +.++.......+.++.+|++|++++..+++..     ++|+|||+
T Consensus         6 GatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vi~~   80 (317)
T TIGR01181         6 GGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEH-----QPDAVVHF   80 (317)
T ss_pred             cCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhc-----CCCEEEEc
Confidence            899999999999999987  6898887632     12222222236778899999999998887764     68999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC------------CCCchhhhHh
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP------------GPWAGTYTAS  141 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~------------~~~~~~y~~s  141 (162)
                      ++....    +.+.+.++..+++|+.++..+++.+.+.+   .+.++|++||...+.+            ..+...|+.+
T Consensus        81 a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~s  153 (317)
T TIGR01181        81 AAESHV----DRSISGPAAFIETNVVGTYTLLEAVRKYW---HEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSAS  153 (317)
T ss_pred             ccccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHhcC---CCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHH
Confidence            986532    22345567789999999999998875533   2348999998653321            1234479999


Q ss_pred             HHHHHHHHHHHHHHhc
Q 042185          142 KAALHSLTDTLRLELG  157 (162)
Q Consensus       142 Kaa~~~l~~~l~~e~~  157 (162)
                      |.+.+.+++.++.+.+
T Consensus       154 K~~~e~~~~~~~~~~~  169 (317)
T TIGR01181       154 KAASDHLVRAYHRTYG  169 (317)
T ss_pred             HHHHHHHHHHHHHHhC
Confidence            9999999998877653

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.66  E-value=5.4e-15  Score=109.58  Aligned_cols=143  Identities=21%  Similarity=0.239  Sum_probs=104.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHH----hhh--cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMA----DLE--QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~----~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+|+||++++++|+++|++|++++|..+...    ...  ......++.+|++|.+++..+++.     .++|+|||+|
T Consensus         7 GatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vvh~a   81 (338)
T PRK10675          7 GGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAIDTVIHFA   81 (338)
T ss_pred             CCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCCEEEECC
Confidence            89999999999999999999998876432211    111  123567889999999888887764     3799999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC------------CCchhhhHhH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG------------PWAGTYTASK  142 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------------~~~~~y~~sK  142 (162)
                      +......    ..+.....+++|+.++..+++++    ++.+.+++|++||...+...            .+...|+.+|
T Consensus        82 ~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK  153 (338)
T PRK10675         82 GLKAVGE----SVQKPLEYYDNNVNGTLRLISAM----RAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSK  153 (338)
T ss_pred             ccccccc----hhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHH
Confidence            8743221    12334567889999999988765    33445689999997543211            2356899999


Q ss_pred             HHHHHHHHHHHHHh
Q 042185          143 AALHSLTDTLRLEL  156 (162)
Q Consensus       143 aa~~~l~~~l~~e~  156 (162)
                      .+.+.+++.++++.
T Consensus       154 ~~~E~~~~~~~~~~  167 (338)
T PRK10675        154 LMVEQILTDLQKAQ  167 (338)
T ss_pred             HHHHHHHHHHHHhc
Confidence            99999999987653

>PLN02240 UDP-glucose 4-epimerase

Probab=99.66  E-value=7.6e-15  Score=109.34  Aligned_cols=142  Identities=15%  Similarity=0.293  Sum_probs=106.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhh----HHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKAT----MADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLV   71 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~----~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi   71 (162)
                      ||+|+||.+++++|+++|++|++++|....    ......     ...+.++.+|+++.++++.++++.     .+|+||
T Consensus        12 GatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-----~~d~vi   86 (352)
T PLN02240         12 GGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST-----RFDAVI   86 (352)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-----CCCEEE
Confidence            899999999999999999999999874321    111111     235788999999999998887763     799999


Q ss_pred             ECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC-----------CCCchhhhH
Q 042185           72 NNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP-----------GPWAGTYTA  140 (162)
Q Consensus        72 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~y~~  140 (162)
                      |+++.....    .+.+++...+++|+.++..+++++    ++.+..++|++||...+..           ..+...|+.
T Consensus        87 h~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~  158 (352)
T PLN02240         87 HFAGLKAVG----ESVAKPLLYYDNNLVGTINLLEVM----AKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGR  158 (352)
T ss_pred             EccccCCcc----ccccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHH
Confidence            999964321    233567789999999999988865    3344468999999644321           123567999


Q ss_pred             hHHHHHHHHHHHHHH
Q 042185          141 SKAALHSLTDTLRLE  155 (162)
Q Consensus       141 sKaa~~~l~~~l~~e  155 (162)
                      +|.+.+.+++.++.+
T Consensus       159 sK~~~e~~~~~~~~~  173 (352)
T PLN02240        159 TKLFIEEICRDIHAS  173 (352)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999988654

>PLN02650 dihydroflavonol-4-reductase

Probab=99.65  E-value=5.9e-15  Score=110.04  Aligned_cols=141  Identities=17%  Similarity=0.134  Sum_probs=104.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+|+||.+++++|+++|++|++++|+.+.......       +..+.++.+|+++.+.++.+++       .+|.|||+
T Consensus        12 GatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------~~d~ViH~   84 (351)
T PLN02650         12 GASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------GCTGVFHV   84 (351)
T ss_pred             CCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------CCCEEEEe
Confidence            899999999999999999999999987654432211       1257888999999988777664       47999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC----C----------------
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG----P----------------  133 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----~----------------  133 (162)
                      |+....   .  ..+.++..+++|+.++..+++++.+..   ...+||++||...+.+.    +                
T Consensus        85 A~~~~~---~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~  156 (351)
T PLN02650         85 ATPMDF---E--SKDPENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRK  156 (351)
T ss_pred             CCCCCC---C--CCCchhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchhhcccCCCCCCccCcccCCchhhhhcc
Confidence            985321   1  113346788999999999999986532   13589999987543210    0                


Q ss_pred             --CchhhhHhHHHHHHHHHHHHHHh
Q 042185          134 --WAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus       134 --~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                        +...|+.||.+.+.+++.++.++
T Consensus       157 ~~~~~~Y~~sK~~~E~~~~~~~~~~  181 (351)
T PLN02650        157 KMTGWMYFVSKTLAEKAAWKYAAEN  181 (351)
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHc
Confidence              11369999999999999887764

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.64  E-value=1.1e-14  Score=107.36  Aligned_cols=141  Identities=15%  Similarity=0.139  Sum_probs=103.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHh---hhc----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMAD---LEQ----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~---~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+|+||.+++++|+++|++|+++.|+.+..+.   ...    ...+.++.+|+++.+++..+++       .+|+|||+
T Consensus        12 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vih~   84 (322)
T PLN02986         12 GASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE-------GCDAVFHT   84 (322)
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh-------CCCEEEEe
Confidence            899999999999999999999988887653222   211    2467889999999988877765       47999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC-CC----------------C---
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA-PG----------------P---  133 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-~~----------------~---  133 (162)
                      |+.....     ..+.....+++|+.++..+++++.+.   .+..+||++||...+. +.                |   
T Consensus        85 A~~~~~~-----~~~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~  156 (322)
T PLN02986         85 ASPVFFT-----VKDPQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLC  156 (322)
T ss_pred             CCCcCCC-----CCCchhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhheecCCccCCCCCCcCcccCCChHHh
Confidence            9864221     11234567899999999999886432   2345999999976431 11                0   


Q ss_pred             --CchhhhHhHHHHHHHHHHHHHHh
Q 042185          134 --WAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus       134 --~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                        ....|+.+|.+.+.+++.+.++.
T Consensus       157 ~~~~~~Y~~sK~~aE~~~~~~~~~~  181 (322)
T PLN02986        157 RETKNWYPLSKILAENAAWEFAKDN  181 (322)
T ss_pred             hccccchHHHHHHHHHHHHHHHHHh
Confidence              13469999999999888877654

>PLN02214 cinnamoyl-CoA reductase

Probab=99.64  E-value=1.4e-14  Score=107.73  Aligned_cols=136  Identities=16%  Similarity=0.149  Sum_probs=103.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHH-----hhhc-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMA-----DLEQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~-----~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+|+||++++++|+++|++|++++|+.+...     .... ...+.++.+|+++.+++..+++       .+|+|||+|
T Consensus        17 GatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~Vih~A   89 (342)
T PLN02214         17 GAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID-------GCDGVFHTA   89 (342)
T ss_pred             CCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh-------cCCEEEEec
Confidence            89999999999999999999999999765321     1111 1357788999999988877764       479999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC----C-----------------
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG----P-----------------  133 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----~-----------------  133 (162)
                      +...         ++++..+++|+.++..+++++.+    .+.++||++||..+.++.    +                 
T Consensus        90 ~~~~---------~~~~~~~~~nv~gt~~ll~aa~~----~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~  156 (342)
T PLN02214         90 SPVT---------DDPEQMVEPAVNGAKFVINAAAE----AKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKN  156 (342)
T ss_pred             CCCC---------CCHHHHHHHHHHHHHHHHHHHHh----cCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccc
Confidence            8531         23567899999999999998754    334589999996543311    0                 


Q ss_pred             CchhhhHhHHHHHHHHHHHHHHh
Q 042185          134 WAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus       134 ~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                      +...|+.+|.+.+.+++.++.+.
T Consensus       157 p~~~Y~~sK~~aE~~~~~~~~~~  179 (342)
T PLN02214        157 TKNWYCYGKMVAEQAAWETAKEK  179 (342)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHc
Confidence            22469999999999998887664

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.63  E-value=9e-15  Score=105.83  Aligned_cols=138  Identities=19%  Similarity=0.168  Sum_probs=105.4

Q ss_pred             CCCCchHHHHHHHHHHCC--CeEEEEecChhhHH--hhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASD--CRVVATGRSKATMA--DLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g--~~vi~~~r~~~~~~--~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|.||.+++++|+++|  ++|.+.++......  .........++.+|++|.+++.++++.       .|+|||+|+.
T Consensus         4 GgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g-------~d~V~H~Aa~   76 (280)
T PF01073_consen    4 GGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEG-------VDVVFHTAAP   76 (280)
T ss_pred             cCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcC-------CceEEEeCcc
Confidence            899999999999999999  68888888765322  222222333999999999999888765       4999999997


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC---C--------------CCchhhh
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP---G--------------PWAGTYT  139 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---~--------------~~~~~y~  139 (162)
                      .....     ....+..+++|+.|+..+++++..    .+-.++|++||.....+   .              .....|+
T Consensus        77 ~~~~~-----~~~~~~~~~vNV~GT~nvl~aa~~----~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~  147 (280)
T PF01073_consen   77 VPPWG-----DYPPEEYYKVNVDGTRNVLEAARK----AGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYA  147 (280)
T ss_pred             ccccC-----cccHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchH
Confidence            54321     345688999999999999998854    45679999999876543   1              1234799


Q ss_pred             HhHHHHHHHHHHHHH
Q 042185          140 ASKAALHSLTDTLRL  154 (162)
Q Consensus       140 ~sKaa~~~l~~~l~~  154 (162)
                      .||+..+.++.....
T Consensus       148 ~SK~~AE~~V~~a~~  162 (280)
T PF01073_consen  148 ESKALAEKAVLEANG  162 (280)
T ss_pred             HHHHHHHHHHHhhcc
Confidence            999999998877554

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.63  E-value=1.8e-14  Score=106.14  Aligned_cols=137  Identities=19%  Similarity=0.179  Sum_probs=104.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|+||..++++|+++|++|++++|+.+...... +..+.++.+|+++.+++.++++       .+|+|||+++.... 
T Consensus         7 G~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~l~~~~~-------~~d~vi~~a~~~~~-   77 (328)
T TIGR03466         7 GATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE-GLDVEIVEGDLRDPASLRKAVA-------GCRALFHVAADYRL-   77 (328)
T ss_pred             CCccchhHHHHHHHHHCCCEEEEEEecCccccccc-cCCceEEEeeCCCHHHHHHHHh-------CCCEEEEeceeccc-
Confidence            89999999999999999999999999876543322 2368889999999988777654       56999999985321 


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCC---------------CchhhhHhHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGP---------------WAGTYTASKAAL  145 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------------~~~~y~~sKaa~  145 (162)
                           ..++++..+++|+.++..+++++..    .+.+++|++||...+.+.+               ....|+.+|.+.
T Consensus        78 -----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~  148 (328)
T TIGR03466        78 -----WAPDPEEMYAANVEGTRNLLRAALE----AGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLA  148 (328)
T ss_pred             -----CCCCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHH
Confidence                 1234567888999999998888643    3456999999976554211               134699999999


Q ss_pred             HHHHHHHHHH
Q 042185          146 HSLTDTLRLE  155 (162)
Q Consensus       146 ~~l~~~l~~e  155 (162)
                      +.+++.+..+
T Consensus       149 e~~~~~~~~~  158 (328)
T TIGR03466       149 EQAALEMAAE  158 (328)
T ss_pred             HHHHHHHHHh
Confidence            9999988765

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.62  E-value=2.5e-14  Score=105.16  Aligned_cols=142  Identities=21%  Similarity=0.208  Sum_probs=104.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhH-Hh---hhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATM-AD---LEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~-~~---~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|+||++++++|.++|++|++++|..... +.   ......+.++.+|+++.++++++++.     .++|++||++|.
T Consensus         6 GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~vv~~ag~   80 (328)
T TIGR01179         6 GGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEE-----HKIDAVIHFAGL   80 (328)
T ss_pred             CCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHh-----CCCcEEEECccc
Confidence            8999999999999999999998887643221 11   11112567889999999999888764     489999999997


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC-----------CCchhhhHhHHHH
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG-----------PWAGTYTASKAAL  145 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~y~~sKaa~  145 (162)
                      ....+    ..++....+..|+.++..+++++.    +.+..++|++||...+...           .+...|+.+|++.
T Consensus        81 ~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~  152 (328)
T TIGR01179        81 IAVGE----SVQDPLKYYRNNVVNTLNLLEAMQ----QTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMS  152 (328)
T ss_pred             cCcch----hhcCchhhhhhhHHHHHHHHHHHH----hcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHH
Confidence            53321    223445678889999999888753    3344689999886543211           1345799999999


Q ss_pred             HHHHHHHHHH
Q 042185          146 HSLTDTLRLE  155 (162)
Q Consensus       146 ~~l~~~l~~e  155 (162)
                      +.+++.++.+
T Consensus       153 e~~~~~~~~~  162 (328)
T TIGR01179       153 ERILRDLSKA  162 (328)
T ss_pred             HHHHHHHHHh
Confidence            9999988765

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.62  E-value=1.3e-15  Score=109.22  Aligned_cols=140  Identities=16%  Similarity=0.256  Sum_probs=102.0

Q ss_pred             CCCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCC-------ce----eEEEeccCChHHHHHHHHHHHHHcCCcc
Q 042185            1 CSQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDP-------RF----FVQELDVLSEQSVQNVLSNVLEKFGKID   68 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~-------~~----~~~~~D~~~~~~i~~~~~~~~~~~~~id   68 (162)
                      ||+|.||+++|++|++.+. +|+++|+++..+-.+..+.       ++    .++.+|+.|.+.+..++++.     ++|
T Consensus         5 Ga~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~-----~pd   79 (293)
T PF02719_consen    5 GAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY-----KPD   79 (293)
T ss_dssp             TTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT-------T-S
T ss_pred             ccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc-----CCC
Confidence            8999999999999999985 8999999987766554322       23    34578999999998888766     999


Q ss_pred             EEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHH
Q 042185           69 VLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSL  148 (162)
Q Consensus        69 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l  148 (162)
                      +|||.|+.......+    +.....+++|+.|+.++++++..    .+-.++|++|+-=+..|   ...||+||...+.+
T Consensus        80 iVfHaAA~KhVpl~E----~~p~eav~tNv~GT~nv~~aa~~----~~v~~~v~ISTDKAv~P---tnvmGatKrlaE~l  148 (293)
T PF02719_consen   80 IVFHAAALKHVPLME----DNPFEAVKTNVLGTQNVAEAAIE----HGVERFVFISTDKAVNP---TNVMGATKRLAEKL  148 (293)
T ss_dssp             EEEE------HHHHC----CCHHHHHHHHCHHHHHHHHHHHH----TT-SEEEEEEECGCSS-----SHHHHHHHHHHHH
T ss_pred             EEEEChhcCCCChHH----hCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEccccccCCC---CcHHHHHHHHHHHH
Confidence            999999986543222    34577899999999999999866    34569999999877664   37899999999999


Q ss_pred             HHHHHHHh
Q 042185          149 TDTLRLEL  156 (162)
Q Consensus       149 ~~~l~~e~  156 (162)
                      +...+...
T Consensus       149 ~~~~~~~~  156 (293)
T PF02719_consen  149 VQAANQYS  156 (293)
T ss_dssp             HHHHCCTS
T ss_pred             HHHHhhhC
Confidence            99887765

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02583 cinnamoyl-CoA reductase

Probab=99.59  E-value=6e-14  Score=102.46  Aligned_cols=139  Identities=17%  Similarity=0.116  Sum_probs=100.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh--hH----Hhhh-cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA--TM----ADLE-QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~--~~----~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+|+||++++++|+++|++|+++.|+.+  ..    ..+. ...++.++.+|++|.+++..++.       ..|.++|.
T Consensus        13 GatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~-------~~d~v~~~   85 (297)
T PLN02583         13 DASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK-------GCSGLFCC   85 (297)
T ss_pred             CCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc-------CCCEEEEe
Confidence            89999999999999999999999998532  21    1111 12357888999999988765543       46888887


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC---C------------C----
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG---P------------W----  134 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---~------------~----  134 (162)
                      ++....     .. ..++..+++|+.+++.+++++.+.+   ..++||++||.++....   +            .    
T Consensus        86 ~~~~~~-----~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~  156 (297)
T PLN02583         86 FDPPSD-----YP-SYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFC  156 (297)
T ss_pred             CccCCc-----cc-ccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHheecccccCCCCCCCCcccCCCHHHH
Confidence            653211     11 2467899999999999999987643   23699999998654211   0            0    


Q ss_pred             ---chhhhHhHHHHHHHHHHHHHH
Q 042185          135 ---AGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus       135 ---~~~y~~sKaa~~~l~~~l~~e  155 (162)
                         ...|+.||...+.++..++++
T Consensus       157 ~~~~~~Y~~sK~~aE~~~~~~~~~  180 (297)
T PLN02583        157 RKFKLWHALAKTLSEKTAWALAMD  180 (297)
T ss_pred             hhcccHHHHHHHHHHHHHHHHHHH
Confidence               015999999999988777654

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.59  E-value=6.1e-14  Score=103.25  Aligned_cols=141  Identities=16%  Similarity=0.137  Sum_probs=101.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHH---hhhc----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMA---DLEQ----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~---~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+|+||++++++|+++|++|++++|+.....   ....    ...+.++.+|+++.+++..+++       .+|+|||+
T Consensus        11 GatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~Vih~   83 (322)
T PLN02662         11 GASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-------GCEGVFHT   83 (322)
T ss_pred             CChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------CCCEEEEe
Confidence            89999999999999999999999988754322   1111    2467889999999887776654       46999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccc--cCCCC--------------C---
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTV--AAPGP--------------W---  134 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~--~~~~~--------------~---  134 (162)
                      |+.....    . .+.....+++|+.++..+++++....   +..++|++||.++  +.+.+              +   
T Consensus        84 A~~~~~~----~-~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~  155 (322)
T PLN02662         84 ASPFYHD----V-TDPQAELIDPAVKGTLNVLRSCAKVP---SVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFC  155 (322)
T ss_pred             CCcccCC----C-CChHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHh
Confidence            9864211    1 12235788999999999999875421   3458999999753  21110              0   


Q ss_pred             ---chhhhHhHHHHHHHHHHHHHHh
Q 042185          135 ---AGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus       135 ---~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                         ...|+.+|...+.+++.+..+.
T Consensus       156 ~~~~~~Y~~sK~~~E~~~~~~~~~~  180 (322)
T PLN02662        156 EESKLWYVLSKTLAEEAAWKFAKEN  180 (322)
T ss_pred             hcccchHHHHHHHHHHHHHHHHHHc
Confidence               1369999999999888776553

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.58  E-value=9.7e-14  Score=97.72  Aligned_cols=143  Identities=22%  Similarity=0.219  Sum_probs=110.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|.||.+++++|.++|+.|+.+.|+............+.++.+|+.+.++++++++..     .+|.|||+++.... 
T Consensus         5 GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~~-   78 (236)
T PF01370_consen    5 GATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKA-----NIDVVIHLAAFSSN-   78 (236)
T ss_dssp             TTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHH-----TESEEEEEBSSSSH-
T ss_pred             ccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeecccccccccccccc-----CceEEEEeeccccc-
Confidence            899999999999999999998888887655443333338899999999999999999988     89999999986421 


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC-----------CCchhhhHhHHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG-----------PWAGTYTASKAALHSLT  149 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~y~~sKaa~~~l~  149 (162)
                         ..+.+.....++.|+.++..+++.+..    .+..++|++||...+...           .+...|+.+|...+.++
T Consensus        79 ---~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~  151 (236)
T PF01370_consen   79 ---PESFEDPEEIIEANVQGTRNLLEAARE----AGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELL  151 (236)
T ss_dssp             ---HHHHHSHHHHHHHHHHHHHHHHHHHHH----HTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHH
T ss_pred             ---ccccccccccccccccccccccccccc----cccccccccccccccccccccccccccccccccccccccccccccc
Confidence               122355677888888888888777643    444799999996544322           13446999999999999


Q ss_pred             HHHHHHh
Q 042185          150 DTLRLEL  156 (162)
Q Consensus       150 ~~l~~e~  156 (162)
                      +.+..+.
T Consensus       152 ~~~~~~~  158 (236)
T PF01370_consen  152 RDYAKKY  158 (236)
T ss_dssp             HHHHHHH
T ss_pred             ccccccc
Confidence            9888764

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.57  E-value=9.3e-14  Score=103.55  Aligned_cols=141  Identities=16%  Similarity=0.143  Sum_probs=102.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhh----HHhhhc------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKAT----MADLEQ------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVL   70 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~----~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~v   70 (162)
                      ||+|.||.+++++|.++|++|++++|....    ......      ..++.++.+|+.|.+++..+++       .+|+|
T Consensus        22 GatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~-------~~d~V   94 (348)
T PRK15181         22 GVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK-------NVDYV   94 (348)
T ss_pred             CCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh-------CCCEE
Confidence            899999999999999999999999985432    111111      1357788999999877766653       47999


Q ss_pred             EECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC-----------CCchhhh
Q 042185           71 VNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG-----------PWAGTYT  139 (162)
Q Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~y~  139 (162)
                      ||.|+.....    .+.++....+++|+.++..+++++..    .+..++|++||...+...           .+...|+
T Consensus        95 iHlAa~~~~~----~~~~~~~~~~~~Nv~gt~nll~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~  166 (348)
T PRK15181         95 LHQAALGSVP----RSLKDPIATNSANIDGFLNMLTAARD----AHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYA  166 (348)
T ss_pred             EECccccCch----hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhh
Confidence            9999964321    12233445789999999999988633    344589999987554311           1345799


Q ss_pred             HhHHHHHHHHHHHHHHh
Q 042185          140 ASKAALHSLTDTLRLEL  156 (162)
Q Consensus       140 ~sKaa~~~l~~~l~~e~  156 (162)
                      .+|.+.+.+++.++.+.
T Consensus       167 ~sK~~~e~~~~~~~~~~  183 (348)
T PRK15181        167 VTKYVNELYADVFARSY  183 (348)
T ss_pred             HHHHHHHHHHHHHHHHh
Confidence            99999999988876553

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.56  E-value=1.8e-13  Score=104.75  Aligned_cols=141  Identities=17%  Similarity=0.232  Sum_probs=117.3

Q ss_pred             CCCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            1 CSQGGIGHALARAFAASDC-RVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      ||+|.||+++|+++++.+. ++++.+|++-.+-.+..       ..+..++-+|+.|.+.++.++++.     ++|+|+|
T Consensus       257 GagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~-----kvd~VfH  331 (588)
T COG1086         257 GGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH-----KVDIVFH  331 (588)
T ss_pred             CCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC-----CCceEEE
Confidence            8999999999999999987 79999999765444322       377889999999999999998887     8999999


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHH
Q 042185           73 NAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTL  152 (162)
Q Consensus        73 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l  152 (162)
                      +|+......    -+.+....+.+|+.|+.+++.++..    .+-.++|.+|+--+..|.   ..||++|...+.++.++
T Consensus       332 AAA~KHVPl----~E~nP~Eai~tNV~GT~nv~~aa~~----~~V~~~V~iSTDKAV~Pt---NvmGaTKr~aE~~~~a~  400 (588)
T COG1086         332 AAALKHVPL----VEYNPEEAIKTNVLGTENVAEAAIK----NGVKKFVLISTDKAVNPT---NVMGATKRLAEKLFQAA  400 (588)
T ss_pred             hhhhccCcc----hhcCHHHHHHHhhHhHHHHHHHHHH----hCCCEEEEEecCcccCCc---hHhhHHHHHHHHHHHHH
Confidence            999865432    3445677889999999999999855    445699999998777764   78999999999999998


Q ss_pred             HHHhc
Q 042185          153 RLELG  157 (162)
Q Consensus       153 ~~e~~  157 (162)
                      +.+..
T Consensus       401 ~~~~~  405 (588)
T COG1086         401 NRNVS  405 (588)
T ss_pred             hhccC
Confidence            87655

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.52  E-value=5.4e-13  Score=96.78  Aligned_cols=116  Identities=16%  Similarity=0.189  Sum_probs=91.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhH------Hhhhc-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATM------ADLEQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~------~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+|.||..+++.|+++||+|..+.|+++..      .++.. +.+...+..|+.+++++..+++.+       |+|||.
T Consensus        13 GAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gc-------dgVfH~   85 (327)
T KOG1502|consen   13 GASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGC-------DGVFHT   85 (327)
T ss_pred             CCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCC-------CEEEEe
Confidence            8999999999999999999999999998763      33322 345889999999999999888875       999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP  131 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~  131 (162)
                      |........     +.-.+.++..+.|+.++++++...   +.-.++|++||.++..+
T Consensus        86 Asp~~~~~~-----~~e~~li~pav~Gt~nVL~ac~~~---~sVkrvV~TSS~aAv~~  135 (327)
T KOG1502|consen   86 ASPVDFDLE-----DPEKELIDPAVKGTKNVLEACKKT---KSVKRVVYTSSTAAVRY  135 (327)
T ss_pred             CccCCCCCC-----CcHHhhhhHHHHHHHHHHHHHhcc---CCcceEEEeccHHHhcc
Confidence            986433211     122378899999999999998552   23469999999987754

>PLN02427 UDP-apiose/xylose synthase

Probab=99.52  E-value=6.6e-13  Score=100.26  Aligned_cols=139  Identities=15%  Similarity=0.221  Sum_probs=98.7

Q ss_pred             CCCCchHHHHHHHHHHC-CCeEEEEecChhhHHhhhc------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAAS-DCRVVATGRSKATMADLEQ------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~-g~~vi~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+|.||++++++|+++ |++|+.++|+.+.......      ...+.++.+|++|.++++++++       .+|+|||+
T Consensus        21 GgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~-------~~d~ViHl   93 (386)
T PLN02427         21 GAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK-------MADLTINL   93 (386)
T ss_pred             CCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh-------cCCEEEEc
Confidence            89999999999999998 5899999987665444322      1358899999999888776654       36999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC---------C-----------
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG---------P-----------  133 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~-----------  133 (162)
                      |+.........    +-...+..|+.+...+++++..    .+ .++|++||...+...         |           
T Consensus        94 Aa~~~~~~~~~----~~~~~~~~n~~gt~~ll~aa~~----~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~  164 (386)
T PLN02427         94 AAICTPADYNT----RPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLK  164 (386)
T ss_pred             ccccChhhhhh----ChHHHHHHHHHHHHHHHHHHHh----cC-CEEEEEeeeeeeCCCcCCCCCccccccccccccccc
Confidence            99643321111    1123456799999888887632    22 589999997543210         0           


Q ss_pred             -------------CchhhhHhHHHHHHHHHHHHHH
Q 042185          134 -------------WAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus       134 -------------~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                                   +...|+.+|.+.+.++..++..
T Consensus       165 e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~  199 (386)
T PLN02427        165 EDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE  199 (386)
T ss_pred             ccccccccCCCCccccchHHHHHHHHHHHHHHHhh
Confidence                         1136999999999998876544

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.52  E-value=2.4e-12  Score=92.73  Aligned_cols=160  Identities=22%  Similarity=0.290  Sum_probs=130.4

Q ss_pred             CCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC--CceeEEEeccCChHHHHHHHHHHHHHcC--------------C
Q 042185            3 QGGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLEKFG--------------K   66 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~--------------~   66 (162)
                      ...|++.+|..|.++|+-|+++..+.+..+.++++  ..+.....|..+..++...+..+.+.+.              .
T Consensus        13 ~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~~p~~~~~~h~l~   92 (299)
T PF08643_consen   13 HDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESEDRPDIRPLWLDDSDPSSIHASLSRFASLLSRPHVPFPGAPPHHLQ   92 (299)
T ss_pred             CCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhccCCCCCCcccCCCCCcchHHHHHHHHHHhcCCCCCCCCCCCceeE
Confidence            56799999999999999999999998877766554  4567777888777777777777766543              3


Q ss_pred             ccEEEECCCCC-CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhh--cCCCeEEEec-cccccCCCCCchhhhHhH
Q 042185           67 IDVLVNNAGVQ-CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY--RKKGKIINVG-SVTVAAPGPWAGTYTASK  142 (162)
Q Consensus        67 id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~iv~is-S~~~~~~~~~~~~y~~sK  142 (162)
                      +..||...... ..+|++.++.+.|...++.|+..++..++.++|+++.  .++.+||++. |.......|..+.-.+..
T Consensus        93 L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ssl~~PfhspE~~~~  172 (299)
T PF08643_consen   93 LKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSSLNPPFHSPESIVS  172 (299)
T ss_pred             EEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhccCCCccCHHHHHH
Confidence            55666666543 5689999999999999999999999999999999987  2355666654 666777788889999999


Q ss_pred             HHHHHHHHHHHHHhccCCCC
Q 042185          143 AALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       143 aa~~~l~~~l~~e~~~~gi~  162 (162)
                      +++.+|++.|++|+.+.||+
T Consensus       173 ~al~~~~~~LrrEl~~~~I~  192 (299)
T PF08643_consen  173 SALSSFFTSLRRELRPHNID  192 (299)
T ss_pred             HHHHHHHHHHHHHhhhcCCc
Confidence            99999999999999988874

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.52  E-value=3.5e-13  Score=98.80  Aligned_cols=139  Identities=14%  Similarity=0.163  Sum_probs=94.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHH--HcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLE--KFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~--~~~~id~vi~~ag~~~   78 (162)
                      ||+|.||++++++|.++|++++++.++.+.....     ..+..+|++|..+.+.+++.+.+  .++++|+|||+|+...
T Consensus         6 Ga~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~   80 (308)
T PRK11150          6 GGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-----VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGACSS   80 (308)
T ss_pred             cCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-----HhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECceecC
Confidence            8999999999999999999766555443221111     12344677776666666665542  3458999999998643


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC-----------CCCchhhhHhHHHHHH
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP-----------GPWAGTYTASKAALHS  147 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~y~~sKaa~~~  147 (162)
                      ..   ..+.   +..++.|+.++..+++++..    .+ .++|++||...+..           ..+...|+.+|.+.+.
T Consensus        81 ~~---~~~~---~~~~~~n~~~t~~ll~~~~~----~~-~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  149 (308)
T PRK11150         81 TT---EWDG---KYMMDNNYQYSKELLHYCLE----RE-IPFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDE  149 (308)
T ss_pred             Cc---CCCh---HHHHHHHHHHHHHHHHHHHH----cC-CcEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHH
Confidence            22   1122   34689999999998888743    33 47999999754332           1234579999999999


Q ss_pred             HHHHHHHH
Q 042185          148 LTDTLRLE  155 (162)
Q Consensus       148 l~~~l~~e  155 (162)
                      +++.+..+
T Consensus       150 ~~~~~~~~  157 (308)
T PRK11150        150 YVRQILPE  157 (308)
T ss_pred             HHHHHHHH
Confidence            98887654

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.51  E-value=1.9e-12  Score=92.35  Aligned_cols=130  Identities=17%  Similarity=0.180  Sum_probs=87.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      ||+|+||++++++|+++|++|+++.|+.++...... ...+.++.+|+++..  ..+.+.+.   ..+|.||+++|....
T Consensus        24 GasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~--~~l~~~~~---~~~d~vi~~~g~~~~   98 (251)
T PLN00141         24 GATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGS--DKLVEAIG---DDSDAVICATGFRRS   98 (251)
T ss_pred             CCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCH--HHHHHHhh---cCCCEEEECCCCCcC
Confidence            899999999999999999999999999876554433 246888999998731  22222221   378999999986421


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC---CCCCchhhhHhHHHHHH
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA---PGPWAGTYTASKAALHS  147 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~---~~~~~~~y~~sKaa~~~  147 (162)
                      ..  ..      ..+++|..+...+++++    .+.+.++||++||...+.   +.+....|...|.+...
T Consensus        99 ~~--~~------~~~~~n~~~~~~ll~a~----~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~  157 (251)
T PLN00141         99 FD--PF------APWKVDNFGTVNLVEAC----RKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLT  157 (251)
T ss_pred             CC--CC------CceeeehHHHHHHHHHH----HHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHH
Confidence            11  11      12357777887777775    345567999999986432   22334456666654443

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.50  E-value=1.5e-12  Score=97.05  Aligned_cols=139  Identities=17%  Similarity=0.214  Sum_probs=99.9

Q ss_pred             CCCCchHHHHHHHHHHC-CCeEEEEecChhhHHhhhcCCceeEEEeccC-ChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAAS-DCRVVATGRSKATMADLEQDPRFFVQELDVL-SEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~-~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||+|.||++++++|+++ |++|+.++|+.+..........+.++.+|++ +.+.+..+++       .+|+|||+++...
T Consensus         8 GatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------~~d~ViH~aa~~~   80 (347)
T PRK11908          8 GVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVK-------KCDVILPLVAIAT   80 (347)
T ss_pred             CCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHc-------CCCEEEECcccCC
Confidence            89999999999999986 6999999997765544444456888999997 5554444322       5899999998643


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC------------------CCchhhhH
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG------------------PWAGTYTA  140 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------------------~~~~~y~~  140 (162)
                      ...    ..++.+..+++|+.+...+++++..    .+ .++|++||...+.+.                  .+...|+.
T Consensus        81 ~~~----~~~~p~~~~~~n~~~~~~ll~aa~~----~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~  151 (347)
T PRK11908         81 PAT----YVKQPLRVFELDFEANLPIVRSAVK----YG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYAC  151 (347)
T ss_pred             hHH----hhcCcHHHHHHHHHHHHHHHHHHHh----cC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHH
Confidence            221    1223356778999999888887643    33 599999997543211                  01226999


Q ss_pred             hHHHHHHHHHHHHHH
Q 042185          141 SKAALHSLTDTLRLE  155 (162)
Q Consensus       141 sKaa~~~l~~~l~~e  155 (162)
                      +|.+.+.+++.++.+
T Consensus       152 sK~~~e~~~~~~~~~  166 (347)
T PRK11908        152 SKQLMDRVIWAYGME  166 (347)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999887654

>PLN02686 cinnamoyl-CoA reductase

Probab=99.49  E-value=1.3e-12  Score=98.07  Aligned_cols=142  Identities=9%  Similarity=0.032  Sum_probs=99.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc----------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ----------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVL   70 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~v   70 (162)
                      ||+|+||.+++++|+++|++|+++.|+.+..+.+..          ...+.++.+|++|.+++..+++.       +|.+
T Consensus        60 GatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~-------~d~V  132 (367)
T PLN02686         60 GGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG-------CAGV  132 (367)
T ss_pred             CCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh-------ccEE
Confidence            899999999999999999999988888655443321          12477889999999988877754       4889


Q ss_pred             EECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccc-cC----C--------------
Q 042185           71 VNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTV-AA----P--------------  131 (162)
Q Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~-~~----~--------------  131 (162)
                      ||+++.........    ..+...++|+.++..+++++...   .+..++|++||..+ .+    +              
T Consensus       133 ~hlA~~~~~~~~~~----~~~~~~~~nv~gt~~llea~~~~---~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~  205 (367)
T PLN02686        133 FHTSAFVDPAGLSG----YTKSMAELEAKASENVIEACVRT---ESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSD  205 (367)
T ss_pred             EecCeeeccccccc----ccchhhhhhHHHHHHHHHHHHhc---CCccEEEEeccHHHhcccccCCCCCCcccCCCCCCC
Confidence            99988643221111    11244567888888888886431   13458999999631 10    0              


Q ss_pred             ----CCCchhhhHhHHHHHHHHHHHHHHh
Q 042185          132 ----GPWAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus       132 ----~~~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                          ..+...|+.+|.+.+.+++.++.+.
T Consensus       206 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~  234 (367)
T PLN02686        206 ESFCRDNKLWYALGKLKAEKAAWRAARGK  234 (367)
T ss_pred             hhhcccccchHHHHHHHHHHHHHHHHHhc
Confidence                0122369999999999998887653

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.49  E-value=8.8e-13  Score=94.77  Aligned_cols=144  Identities=19%  Similarity=0.293  Sum_probs=112.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecC----hhhHHhhhc----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRS----KATMADLEQ----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~----~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      ||.|.||.+.+.+|.++|+.|+++|.=    .+.+..++.    ...+.+..+|+.|.+.++++|+..     ++|.|+|
T Consensus         9 GgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----~fd~V~H   83 (343)
T KOG1371|consen    9 GGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----KFDAVMH   83 (343)
T ss_pred             cCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----CCceEEe
Confidence            899999999999999999999999862    233333322    367899999999999999999988     7999999


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC-----------CCC-CchhhhH
Q 042185           73 NAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA-----------PGP-WAGTYTA  140 (162)
Q Consensus        73 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~-~~~~y~~  140 (162)
                      -|+....+.    +.+.....+..|+.+++.++..+    ++.+-..+|+.||...+.           +.. +...|+.
T Consensus        84 fa~~~~vge----S~~~p~~Y~~nNi~gtlnlLe~~----~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~  155 (343)
T KOG1371|consen   84 FAALAAVGE----SMENPLSYYHNNIAGTLNLLEVM----KAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGK  155 (343)
T ss_pred             ehhhhccch----hhhCchhheehhhhhHHHHHHHH----HHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchh
Confidence            999765432    33444788899999999988875    444556889988876542           112 5678999


Q ss_pred             hHHHHHHHHHHHHHHhc
Q 042185          141 SKAALHSLTDTLRLELG  157 (162)
Q Consensus       141 sKaa~~~l~~~l~~e~~  157 (162)
                      +|-+++..++.+...+.
T Consensus       156 tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  156 TKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             hhHHHHHHHHhhhcccc
Confidence            99999999988776543

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.48  E-value=1.5e-12  Score=94.44  Aligned_cols=122  Identities=22%  Similarity=0.292  Sum_probs=94.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|.||.+++++|.++|++|++++|+                .+|+.+.++++++++..     .+|+|||+++.....
T Consensus         6 G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------~~d~~~~~~~~~~~~~~-----~~d~vi~~a~~~~~~   64 (287)
T TIGR01214         6 GANGQLGRELVQQLSPEGRVVVALTSS----------------QLDLTDPEALERLLRAI-----RPDAVVNTAAYTDVD   64 (287)
T ss_pred             cCCCHHHHHHHHHHHhcCCEEEEeCCc----------------ccCCCCHHHHHHHHHhC-----CCCEEEECCcccccc
Confidence            899999999999999999999999885                47999999988887764     789999999864321


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC-----------CCCchhhhHhHHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP-----------GPWAGTYTASKAALHSLT  149 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~y~~sKaa~~~l~  149 (162)
                          ......+..+++|+.++..+++++..    .+ .++|++||...+.+           ..+...|+.+|...+.++
T Consensus        65 ----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~  135 (287)
T TIGR01214        65 ----GAESDPEKAFAVNALAPQNLARAAAR----HG-ARLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAI  135 (287)
T ss_pred             ----ccccCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHH
Confidence                12234567789999999999888643    22 48999998654322           113457999999999888


Q ss_pred             HHH
Q 042185          150 DTL  152 (162)
Q Consensus       150 ~~l  152 (162)
                      +.+
T Consensus       136 ~~~  138 (287)
T TIGR01214       136 RAA  138 (287)
T ss_pred             HHh
Confidence            765

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.47  E-value=8.5e-13  Score=96.52  Aligned_cols=126  Identities=18%  Similarity=0.122  Sum_probs=94.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|.||++++++|.++| +|+.++|...            .+..|++|.+++++++++.     ++|+|||+|+.....
T Consensus         7 G~~GfiGs~l~~~L~~~g-~V~~~~~~~~------------~~~~Dl~d~~~~~~~~~~~-----~~D~Vih~Aa~~~~~   68 (299)
T PRK09987          7 GKTGQVGWELQRALAPLG-NLIALDVHST------------DYCGDFSNPEGVAETVRKI-----RPDVIVNAAAHTAVD   68 (299)
T ss_pred             CCCCHHHHHHHHHhhccC-CEEEeccccc------------cccCCCCCHHHHHHHHHhc-----CCCEEEECCccCCcc
Confidence            899999999999999999 7888887532            2357999999888887764     789999999975432


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC-----------CCCCchhhhHhHHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA-----------PGPWAGTYTASKAALHSLT  149 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~~y~~sKaa~~~l~  149 (162)
                      .    ..++-+..+.+|+.++..+++++..    . +.++|++||...+.           +..+...|+.+|.+.+.++
T Consensus        69 ~----~~~~~~~~~~~N~~~~~~l~~aa~~----~-g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~  139 (299)
T PRK09987         69 K----AESEPEFAQLLNATSVEAIAKAANE----V-GAWVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKAL  139 (299)
T ss_pred             h----hhcCHHHHHHHHHHHHHHHHHHHHH----c-CCeEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHH
Confidence            1    1223356678899999999888643    2 24899999865432           1123457999999999988


Q ss_pred             HHHH
Q 042185          150 DTLR  153 (162)
Q Consensus       150 ~~l~  153 (162)
                      +...
T Consensus       140 ~~~~  143 (299)
T PRK09987        140 QEHC  143 (299)
T ss_pred             HHhC
Confidence            7654

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.47  E-value=1.5e-12  Score=95.15  Aligned_cols=129  Identities=16%  Similarity=0.157  Sum_probs=93.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|.||.++++.|.++|++|+++.+.               ..+|+++.++++.+++..     ++|+|||+|+.....
T Consensus         4 Ga~GfiG~~l~~~L~~~g~~v~~~~~~---------------~~~Dl~~~~~l~~~~~~~-----~~d~Vih~A~~~~~~   63 (306)
T PLN02725          4 GHRGLVGSAIVRKLEALGFTNLVLRTH---------------KELDLTRQADVEAFFAKE-----KPTYVILAAAKVGGI   63 (306)
T ss_pred             cCCCcccHHHHHHHHhCCCcEEEeecc---------------ccCCCCCHHHHHHHHhcc-----CCCEEEEeeeeeccc
Confidence            899999999999999999987766432               148999998888887764     689999999863211


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC-------------C--C-chhhhHhHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG-------------P--W-AGTYTASKAA  144 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-------------~--~-~~~y~~sKaa  144 (162)
                      .   ...++.+..+++|+.++..+++++..    .+..++|++||...+.+.             +  + ...|+.+|.+
T Consensus        64 ~---~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~  136 (306)
T PLN02725         64 H---ANMTYPADFIRENLQIQTNVIDAAYR----HGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIA  136 (306)
T ss_pred             c---hhhhCcHHHHHHHhHHHHHHHHHHHH----cCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHH
Confidence            0   11122345678899999888888743    344689999997543211             1  1 2249999999


Q ss_pred             HHHHHHHHHHHh
Q 042185          145 LHSLTDTLRLEL  156 (162)
Q Consensus       145 ~~~l~~~l~~e~  156 (162)
                      .+.+++.+.++.
T Consensus       137 ~e~~~~~~~~~~  148 (306)
T PLN02725        137 GIKMCQAYRIQY  148 (306)
T ss_pred             HHHHHHHHHHHh
Confidence            999888776654

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.46  E-value=2.9e-12  Score=102.79  Aligned_cols=140  Identities=16%  Similarity=0.173  Sum_probs=101.3

Q ss_pred             CCCCchHHHHHHHHHHC-CCeEEEEecChhhHHhhhcCCceeEEEeccCChHH-HHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAAS-DCRVVATGRSKATMADLEQDPRFFVQELDVLSEQS-VQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~-i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||+|.||.+++++|+++ |++|+.++|+............+.++.+|++|.++ +++++       ..+|+|||+|+...
T Consensus       322 GatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l-------~~~D~ViHlAa~~~  394 (660)
T PRK08125        322 GVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHI-------KKCDVVLPLVAIAT  394 (660)
T ss_pred             CCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHh-------cCCCEEEECccccC
Confidence            89999999999999986 79999999987654433334468888999998654 33332       25899999999754


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC---------------C---CchhhhH
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG---------------P---WAGTYTA  140 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------~---~~~~y~~  140 (162)
                      ....    .++.+..+++|+.++..+++++..    .+ .++|++||...+...               |   +...|+.
T Consensus       395 ~~~~----~~~~~~~~~~Nv~~t~~ll~a~~~----~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~  465 (660)
T PRK08125        395 PIEY----TRNPLRVFELDFEENLKIIRYCVK----YN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSV  465 (660)
T ss_pred             chhh----ccCHHHHHHhhHHHHHHHHHHHHh----cC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHH
Confidence            3211    122345788999999999988754    22 589999996543210               1   1236999


Q ss_pred             hHHHHHHHHHHHHHHh
Q 042185          141 SKAALHSLTDTLRLEL  156 (162)
Q Consensus       141 sKaa~~~l~~~l~~e~  156 (162)
                      +|.+.+.+++.++.++
T Consensus       466 sK~~~E~~~~~~~~~~  481 (660)
T PRK08125        466 SKQLLDRVIWAYGEKE  481 (660)
T ss_pred             HHHHHHHHHHHHHHhc
Confidence            9999999999887654

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.44  E-value=6.9e-12  Score=94.87  Aligned_cols=132  Identities=19%  Similarity=0.206  Sum_probs=95.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHH------hhh-cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMA------DLE-QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~------~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+|+||++++++|+++|++|++++|+.....      +.. ....+.++.+|++|.++++.+++..   ..++|+||||
T Consensus        67 GatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~---~~~~D~Vi~~  143 (390)
T PLN02657         67 GATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE---GDPVDVVVSC  143 (390)
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh---CCCCcEEEEC
Confidence            89999999999999999999999999875432      111 1246789999999999999888754   1278999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDT  151 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~  151 (162)
                      ++.....     .    ...+++|+.+...+++++    ++.+.+++|++||.....+   ...|..+|...+...+.
T Consensus       144 aa~~~~~-----~----~~~~~vn~~~~~~ll~aa----~~~gv~r~V~iSS~~v~~p---~~~~~~sK~~~E~~l~~  205 (390)
T PLN02657        144 LASRTGG-----V----KDSWKIDYQATKNSLDAG----REVGAKHFVLLSAICVQKP---LLEFQRAKLKFEAELQA  205 (390)
T ss_pred             CccCCCC-----C----ccchhhHHHHHHHHHHHH----HHcCCCEEEEEeeccccCc---chHHHHHHHHHHHHHHh
Confidence            9853211     1    122456777777777765    3345568999999865543   45688889888776543

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.44  E-value=4.7e-12  Score=92.84  Aligned_cols=136  Identities=15%  Similarity=0.112  Sum_probs=95.8

Q ss_pred             CCCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      ||+|.||.++++.|.++|+ .|++++|..... ... +.....+..|+++.+.++.+.+.   .+.++|+|||+|+....
T Consensus         5 GatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~-~~~~~~~~~d~~~~~~~~~~~~~---~~~~~D~vvh~A~~~~~   79 (314)
T TIGR02197         5 GGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFL-NLADLVIADYIDKEDFLDRLEKG---AFGKIEAIFHQGACSDT   79 (314)
T ss_pred             CCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhh-hhhheeeeccCcchhHHHHHHhh---ccCCCCEEEECccccCc
Confidence            8999999999999999998 788887754321 111 11123456788777666655443   34689999999996321


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC-----------CCCchhhhHhHHHHHHH
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP-----------GPWAGTYTASKAALHSL  148 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~y~~sKaa~~~l  148 (162)
                            +.++.+..+++|+.++..+++.+..    .+ .++|++||...+..           ..+...|+.+|...+.+
T Consensus        80 ------~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~  148 (314)
T TIGR02197        80 ------TETDGEYMMENNYQYSKRLLDWCAE----KG-IPFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQY  148 (314)
T ss_pred             ------cccchHHHHHHHHHHHHHHHHHHHH----hC-CcEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHHHHHHHH
Confidence                  2335577889999999999888643    22 47999999754421           11456799999999999


Q ss_pred             HHHH
Q 042185          149 TDTL  152 (162)
Q Consensus       149 ~~~l  152 (162)
                      ++..
T Consensus       149 ~~~~  152 (314)
T TIGR02197       149 VRRR  152 (314)
T ss_pred             HHHH
Confidence            8763

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.44  E-value=4.3e-12  Score=92.90  Aligned_cols=139  Identities=21%  Similarity=0.204  Sum_probs=101.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|.||++++.+|.++|++|+.++|.........  ....++.+|+++.+.+....+..     . |.|||+++.....
T Consensus         7 G~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~-----~-d~vih~aa~~~~~   78 (314)
T COG0451           7 GGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--SGVEFVVLDLTDRDLVDELAKGV-----P-DAVIHLAAQSSVP   78 (314)
T ss_pred             cCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc--cccceeeecccchHHHHHHHhcC-----C-CEEEEccccCchh
Confidence            78999999999999999999999999766544332  56788899998884444443332     2 9999999975432


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC-----------CCch--hhhHhHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG-----------PWAG--TYTASKAALHS  147 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~--~y~~sKaa~~~  147 (162)
                      ... .+  +....+.+|+.++..+++++..    .+..++|+.||...+.+.           +..+  .|+.+|...+.
T Consensus        79 ~~~-~~--~~~~~~~~nv~gt~~ll~aa~~----~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~  151 (314)
T COG0451          79 DSN-AS--DPAEFLDVNVDGTLNLLEAARA----AGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQ  151 (314)
T ss_pred             hhh-hh--CHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHH
Confidence            111 11  3556889999999999998744    455689997765544422           1112  49999999999


Q ss_pred             HHHHHHH
Q 042185          148 LTDTLRL  154 (162)
Q Consensus       148 l~~~l~~  154 (162)
                      ++.....
T Consensus       152 ~~~~~~~  158 (314)
T COG0451         152 LLRAYAR  158 (314)
T ss_pred             HHHHHHH
Confidence            9998876

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.44  E-value=4.1e-13  Score=94.29  Aligned_cols=95  Identities=17%  Similarity=0.243  Sum_probs=76.4

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGP   81 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~   81 (162)
                      ++||||+++|+.|+++|++|+++++... +.   . .  ....+|+++.++++.+++.+.+.++++|++|||||+....+
T Consensus        23 SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l~---~-~--~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv~d~~~   95 (227)
T TIGR02114        23 STGHLGKIITETFLSAGHEVTLVTTKRA-LK---P-E--PHPNLSIREIETTKDLLITLKELVQEHDILIHSMAVSDYTP   95 (227)
T ss_pred             cccHHHHHHHHHHHHCCCEEEEEcChhh-cc---c-c--cCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEeccccc
Confidence            6899999999999999999999886321 11   1 0  12458999999999999999999999999999999877788


Q ss_pred             CCCCChHHHHHHHHhhhhhHHHHHH
Q 042185           82 LAEVPLSAMEQTFNTNVFGPMRLVQ  106 (162)
Q Consensus        82 ~~~~~~~~~~~~~~~n~~~~~~~~~  106 (162)
                      +.+.+.++|++++..   +.+.+.+
T Consensus        96 ~~~~s~e~~~~~~~~---~~~~~~~  117 (227)
T TIGR02114        96 VYMTDLEQVQASDNL---NEFLSKQ  117 (227)
T ss_pred             hhhCCHHHHhhhcch---hhhhccc
Confidence            889999999988544   4444443

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.44  E-value=5.8e-12  Score=101.24  Aligned_cols=144  Identities=19%  Similarity=0.231  Sum_probs=102.1

Q ss_pred             CCCCchHHHHHHHHHHC--CCeEEEEecCh--hhHHhhh---cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAAS--DCRVVATGRSK--ATMADLE---QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~--g~~vi~~~r~~--~~~~~~~---~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+|.||++++++|.++  +++|+.++|..  +....+.   ....+.++.+|++|.+.+..++..     ..+|+|||+
T Consensus        13 GatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-----~~~D~ViHl   87 (668)
T PLN02260         13 GAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLIT-----EGIDTIMHF   87 (668)
T ss_pred             CCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhh-----cCCCEEEEC
Confidence            89999999999999987  67899888742  2222221   124688899999998876665433     379999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC--------------CCCchhhh
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP--------------GPWAGTYT  139 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--------------~~~~~~y~  139 (162)
                      |+.....    ...++....+++|+.++..+++++...   ....++|++||...+..              ..+...|+
T Consensus        88 Aa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~  160 (668)
T PLN02260         88 AAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYS  160 (668)
T ss_pred             CCccCch----hhhhCHHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcH
Confidence            9975321    112233567789999999988886331   22469999999754321              11345799


Q ss_pred             HhHHHHHHHHHHHHHHh
Q 042185          140 ASKAALHSLTDTLRLEL  156 (162)
Q Consensus       140 ~sKaa~~~l~~~l~~e~  156 (162)
                      .+|.+.+.+++.+..++
T Consensus       161 ~sK~~aE~~v~~~~~~~  177 (668)
T PLN02260        161 ATKAGAEMLVMAYGRSY  177 (668)
T ss_pred             HHHHHHHHHHHHHHHHc
Confidence            99999999998876653

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.43  E-value=7.3e-12  Score=94.16  Aligned_cols=141  Identities=15%  Similarity=0.101  Sum_probs=97.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|.||++++++|.++|++|+.++|........ ......++.+|+++.+.+..++.       .+|+|||+|+.....
T Consensus        28 GgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~Vih~Aa~~~~~   99 (370)
T PLN02695         28 GAGGFIASHIARRLKAEGHYIIASDWKKNEHMSE-DMFCHEFHLVDLRVMENCLKVTK-------GVDHVFNLAADMGGM   99 (370)
T ss_pred             CCccHHHHHHHHHHHhCCCEEEEEEecccccccc-ccccceEEECCCCCHHHHHHHHh-------CCCEEEEcccccCCc
Confidence            8999999999999999999999999864321110 01235678899998876655542       579999999864321


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC-----------------CCCCchhhhHhHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA-----------------PGPWAGTYTASKA  143 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------------~~~~~~~y~~sKa  143 (162)
                      ....   .+....+..|+.++..+++++..    .+..++|++||...+.                 +..+...|+.+|.
T Consensus       100 ~~~~---~~~~~~~~~N~~~t~nll~aa~~----~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~  172 (370)
T PLN02695        100 GFIQ---SNHSVIMYNNTMISFNMLEAARI----NGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL  172 (370)
T ss_pred             cccc---cCchhhHHHHHHHHHHHHHHHHH----hCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHH
Confidence            1111   12234566789999888887632    3445999999864321                 2224457999999


Q ss_pred             HHHHHHHHHHHHh
Q 042185          144 ALHSLTDTLRLEL  156 (162)
Q Consensus       144 a~~~l~~~l~~e~  156 (162)
                      +.+.+++.++..+
T Consensus       173 ~~E~~~~~~~~~~  185 (370)
T PLN02695        173 ATEELCKHYTKDF  185 (370)
T ss_pred             HHHHHHHHHHHHh
Confidence            9999988876553

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.37  E-value=3.4e-11  Score=89.82  Aligned_cols=140  Identities=16%  Similarity=0.179  Sum_probs=96.4

Q ss_pred             CCCCchHHHHHHHHHHCC--CeEEEEecChhh------HHhhhc---------C-CceeEEEeccCChHH-H-HHHHHHH
Q 042185            1 CSQGGIGHALARAFAASD--CRVVATGRSKAT------MADLEQ---------D-PRFFVQELDVLSEQS-V-QNVLSNV   60 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g--~~vi~~~r~~~~------~~~~~~---------~-~~~~~~~~D~~~~~~-i-~~~~~~~   60 (162)
                      ||+|+||++++++|+++|  ++|+.+.|+.+.      +.+...         . .++.++.+|++++.- + ......+
T Consensus         6 GatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~~~~~~   85 (367)
T TIGR01746         6 GATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDAEWERL   85 (367)
T ss_pred             ccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHHHHHHH
Confidence            899999999999999998  689999997542      111110         0 468889999987531 0 1112222


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC--------
Q 042185           61 LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG--------  132 (162)
Q Consensus        61 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~--------  132 (162)
                         ...+|+||||++.....       ..++...++|+.++..+++.+..    .+..+++++||...+...        
T Consensus        86 ---~~~~d~vih~a~~~~~~-------~~~~~~~~~nv~g~~~ll~~a~~----~~~~~~v~iSS~~v~~~~~~~~~~~~  151 (367)
T TIGR01746        86 ---AENVDTIVHNGALVNWV-------YPYSELRAANVLGTREVLRLAAS----GRAKPLHYVSTISVLAAIDLSTVTED  151 (367)
T ss_pred             ---HhhCCEEEeCCcEeccC-------CcHHHHhhhhhHHHHHHHHHHhh----CCCceEEEEccccccCCcCCCCcccc
Confidence               24789999999964321       23566778999999988887643    333469999998665431        


Q ss_pred             --------CCchhhhHhHHHHHHHHHHHHH
Q 042185          133 --------PWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus       133 --------~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                              .....|+.+|.+.+.+++.++.
T Consensus       152 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~  181 (367)
T TIGR01746       152 DAIVTPPPGLAGGYAQSKWVAELLVREASD  181 (367)
T ss_pred             ccccccccccCCChHHHHHHHHHHHHHHHh
Confidence                    1124699999999998887654

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.35  E-value=8.1e-12  Score=90.82  Aligned_cols=122  Identities=26%  Similarity=0.300  Sum_probs=89.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|-||.++.+.|.++|++|+.++|+                .+|++|.+++.+++.+.     ++|+|||+|+.....
T Consensus         7 GasG~lG~~l~~~l~~~~~~v~~~~r~----------------~~dl~d~~~~~~~~~~~-----~pd~Vin~aa~~~~~   65 (286)
T PF04321_consen    7 GASGFLGSALARALKERGYEVIATSRS----------------DLDLTDPEAVAKLLEAF-----KPDVVINCAAYTNVD   65 (286)
T ss_dssp             TTTSHHHHHHHHHHTTTSEEEEEESTT----------------CS-TTSHHHHHHHHHHH-------SEEEE------HH
T ss_pred             CCCCHHHHHHHHHHhhCCCEEEEeCch----------------hcCCCCHHHHHHHHHHh-----CCCeEeccceeecHH
Confidence            899999999999999999999999886                68999999999999888     899999999975332


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC-----------CCchhhhHhHHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG-----------PWAGTYTASKAALHSLT  149 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~y~~sKaa~~~l~  149 (162)
                          .-.++-+..+.+|+.++..+.+.+..     .+.++|++||...+.+.           .+...|+-+|...+..+
T Consensus        66 ----~ce~~p~~a~~iN~~~~~~la~~~~~-----~~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v  136 (286)
T PF04321_consen   66 ----ACEKNPEEAYAINVDATKNLAEACKE-----RGARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAV  136 (286)
T ss_dssp             ----HHHHSHHHHHHHHTHHHHHHHHHHHH-----CT-EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHH
T ss_pred             ----hhhhChhhhHHHhhHHHHHHHHHHHH-----cCCcEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHH
Confidence                12334567889999999999888743     35699999998655332           23457999999999887


Q ss_pred             HHH
Q 042185          150 DTL  152 (162)
Q Consensus       150 ~~l  152 (162)
                      +..
T Consensus       137 ~~~  139 (286)
T PF04321_consen  137 RAA  139 (286)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            763

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.34  E-value=4.3e-11  Score=91.70  Aligned_cols=134  Identities=16%  Similarity=0.147  Sum_probs=94.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh----hHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA----TMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~----~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|.||.+++++|.++|++|++++|...    ..........+.++..|+.+..            ...+|+|||+|+.
T Consensus       127 GatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~------------~~~~D~ViHlAa~  194 (436)
T PLN02166        127 GGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPI------------LLEVDQIYHLACP  194 (436)
T ss_pred             CCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccccc------------ccCCCEEEECcee
Confidence            89999999999999999999999987532    1111222235667777876532            1258999999986


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC----------------CCCchhhhH
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP----------------GPWAGTYTA  140 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----------------~~~~~~y~~  140 (162)
                      .......    .+-...+++|+.++..+++++..    .+ .++|++||...+..                ..+...|+.
T Consensus       195 ~~~~~~~----~~p~~~~~~Nv~gT~nLleaa~~----~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~  265 (436)
T PLN02166        195 ASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDE  265 (436)
T ss_pred             ccchhhc----cCHHHHHHHHHHHHHHHHHHHHH----hC-CEEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHH
Confidence            4332111    12357788999999999988744    22 48999998754421                112346999


Q ss_pred             hHHHHHHHHHHHHHH
Q 042185          141 SKAALHSLTDTLRLE  155 (162)
Q Consensus       141 sKaa~~~l~~~l~~e  155 (162)
                      +|.+.+.+++.+...
T Consensus       266 SK~~aE~~~~~y~~~  280 (436)
T PLN02166        266 GKRTAETLAMDYHRG  280 (436)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999887654

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.33  E-value=9.7e-11  Score=79.58  Aligned_cols=118  Identities=19%  Similarity=0.239  Sum_probs=89.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|.+|+.++++|.++|++|+++.|++++.++   ...+.++.+|+.|.+++...+.       ..|.+|++.|.... 
T Consensus         5 GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al~-------~~d~vi~~~~~~~~-   73 (183)
T PF13460_consen    5 GATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAALK-------GADAVIHAAGPPPK-   73 (183)
T ss_dssp             TTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHHT-------TSSEEEECCHSTTT-
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhhh-------hcchhhhhhhhhcc-
Confidence            899999999999999999999999999887776   6889999999999977766655       56999999975322 


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCc---------hhhhHhHHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWA---------GTYTASKAALHSLT  149 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~---------~~y~~sKaa~~~l~  149 (162)
                             +             ...++.+++.+++.+..++|++|+.......+..         ..|...|...+.+.
T Consensus        74 -------~-------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  131 (183)
T PF13460_consen   74 -------D-------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEAL  131 (183)
T ss_dssp             -------H-------------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHH
T ss_pred             -------c-------------ccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHH
Confidence                   1             3344566666666667799999988766544332         35666666555544

...

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.33  E-value=1.1e-10  Score=76.44  Aligned_cols=149  Identities=20%  Similarity=0.219  Sum_probs=105.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcC--CccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFG--KIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--~id~vi~~ag~~~   78 (162)
                      ||-|.+|.+++++|-.+++-|.-+|-.+....     .....+..|-+--++-+.++.++.+.+.  ++|.||+.||.+.
T Consensus        10 GGkGALGSacv~~FkannywV~siDl~eNe~A-----d~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~CVAGGWA   84 (236)
T KOG4022|consen   10 GGKGALGSACVEFFKANNYWVLSIDLSENEQA-----DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVFCVAGGWA   84 (236)
T ss_pred             cCcchHhHHHHHHHHhcCeEEEEEeecccccc-----cceEEecCCcchhHHHHHHHHHHHHhhcccccceEEEeecccc
Confidence            78899999999999999999988877543211     1233444555556677788888877553  7999999999865


Q ss_pred             CCCCCC-CChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHh
Q 042185           79 VGPLAE-VPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus        79 ~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                      -+.-.. --.++.+-++.-.+..+....+....++  +.+|-+-....-.+..+.|++..|+++|+|+.+|+++|+.+-
T Consensus        85 GGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HL--K~GGLL~LtGAkaAl~gTPgMIGYGMAKaAVHqLt~SLaak~  161 (236)
T KOG4022|consen   85 GGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHL--KPGGLLQLTGAKAALGGTPGMIGYGMAKAAVHQLTSSLAAKD  161 (236)
T ss_pred             CCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhcc--CCCceeeecccccccCCCCcccchhHHHHHHHHHHHHhcccc
Confidence            433221 1123334455555555555555555555  445677777777889999999999999999999999998764

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.33  E-value=5.1e-11  Score=91.43  Aligned_cols=135  Identities=16%  Similarity=0.119  Sum_probs=94.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhh----HHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKAT----MADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~----~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|.||.+++++|.++|++|+++++....    .........+.++..|+.+..     +       ..+|.|||+|+.
T Consensus       126 GatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~-----l-------~~~D~ViHlAa~  193 (442)
T PLN02206        126 GGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPI-----L-------LEVDQIYHLACP  193 (442)
T ss_pred             CcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChh-----h-------cCCCEEEEeeee
Confidence            899999999999999999999998875321    111112345677788876542     1       258999999986


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC----------------CCCchhhhH
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP----------------GPWAGTYTA  140 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----------------~~~~~~y~~  140 (162)
                      ......    .++....+++|+.++..+++++..    .+ .++|++||...+..                ......|+.
T Consensus       194 ~~~~~~----~~~p~~~~~~Nv~gt~nLleaa~~----~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~  264 (442)
T PLN02206        194 ASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDE  264 (442)
T ss_pred             cchhhh----hcCHHHHHHHHHHHHHHHHHHHHH----hC-CEEEEECChHHhCCCCCCCCCccccccCCCCCccchHHH
Confidence            432111    123457889999999999988744    22 48999999765421                112456999


Q ss_pred             hHHHHHHHHHHHHHHh
Q 042185          141 SKAALHSLTDTLRLEL  156 (162)
Q Consensus       141 sKaa~~~l~~~l~~e~  156 (162)
                      +|.+.+.+++.+....
T Consensus       265 SK~~aE~~~~~y~~~~  280 (442)
T PLN02206        265 GKRTAETLTMDYHRGA  280 (442)
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999988776553

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.30  E-value=7.6e-11  Score=86.90  Aligned_cols=127  Identities=10%  Similarity=0.046  Sum_probs=90.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|.||++++++|.++|++|..++|+.+...... ...+.++.+|++|++++..+++       .+|.|||+++.... 
T Consensus         7 GatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~-~~~v~~v~~Dl~d~~~l~~al~-------g~d~Vi~~~~~~~~-   77 (317)
T CHL00194          7 GATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK-EWGAELVYGDLSLPETLPPSFK-------GVTAIIDASTSRPS-   77 (317)
T ss_pred             CCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh-hcCCEEEECCCCCHHHHHHHHC-------CCCEEEECCCCCCC-
Confidence            89999999999999999999999999876543332 2468899999999988766654       46999998764211 


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                              +.....++|+.+...+++++.    +.+-.++|++||..... . +...|..+|...+.+.+
T Consensus        78 --------~~~~~~~~~~~~~~~l~~aa~----~~gvkr~I~~Ss~~~~~-~-~~~~~~~~K~~~e~~l~  133 (317)
T CHL00194         78 --------DLYNAKQIDWDGKLALIEAAK----AAKIKRFIFFSILNAEQ-Y-PYIPLMKLKSDIEQKLK  133 (317)
T ss_pred             --------CccchhhhhHHHHHHHHHHHH----HcCCCEEEEeccccccc-c-CCChHHHHHHHHHHHHH
Confidence                    112345667778777777753    34446999999854321 1 22457888888777654

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.29  E-value=8.8e-11  Score=84.06  Aligned_cols=121  Identities=25%  Similarity=0.325  Sum_probs=99.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      |++|-+|.++++.|. .+..|+.++|..                +|++|.+.+.+++.+.     ++|+|||+|++....
T Consensus         7 G~~GqLG~~L~~~l~-~~~~v~a~~~~~----------------~Ditd~~~v~~~i~~~-----~PDvVIn~AAyt~vD   64 (281)
T COG1091           7 GANGQLGTELRRALP-GEFEVIATDRAE----------------LDITDPDAVLEVIRET-----RPDVVINAAAYTAVD   64 (281)
T ss_pred             cCCChHHHHHHHHhC-CCceEEeccCcc----------------ccccChHHHHHHHHhh-----CCCEEEECccccccc
Confidence            899999999999999 668999998864                8999999999999998     999999999986554


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC-----------CCCchhhhHhHHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP-----------GPWAGTYTASKAALHSLT  149 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~y~~sKaa~~~l~  149 (162)
                      ..    +.+-+..+.+|..++..+.+++-.     -+..+|++|+-..+.+           ..+...||.||.+-+..+
T Consensus        65 ~a----E~~~e~A~~vNa~~~~~lA~aa~~-----~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v  135 (281)
T COG1091          65 KA----ESEPELAFAVNATGAENLARAAAE-----VGARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAV  135 (281)
T ss_pred             cc----cCCHHHHHHhHHHHHHHHHHHHHH-----hCCeEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHH
Confidence            33    344678899999999999998733     3578999998654432           234567999999999988


Q ss_pred             HHH
Q 042185          150 DTL  152 (162)
Q Consensus       150 ~~l  152 (162)
                      +..
T Consensus       136 ~~~  138 (281)
T COG1091         136 RAA  138 (281)
T ss_pred             HHh
Confidence            765

>PLN02778 3,5-epimerase/4-reductase

Probab=99.26  E-value=1.9e-10  Score=84.12  Aligned_cols=124  Identities=19%  Similarity=0.161  Sum_probs=83.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|.||.+++++|.++|++|+...                   .|+++.+.++..+++.     ++|+|||+|+.....
T Consensus        16 G~tGfiG~~l~~~L~~~g~~V~~~~-------------------~~~~~~~~v~~~l~~~-----~~D~ViH~Aa~~~~~   71 (298)
T PLN02778         16 GKTGWIGGLLGKLCQEQGIDFHYGS-------------------GRLENRASLEADIDAV-----KPTHVFNAAGVTGRP   71 (298)
T ss_pred             CCCCHHHHHHHHHHHhCCCEEEEec-------------------CccCCHHHHHHHHHhc-----CCCEEEECCcccCCC
Confidence            8999999999999999999886432                   2445555555555442     789999999975321


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC------------------CCCCchhhhHhH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA------------------PGPWAGTYTASK  142 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~------------------~~~~~~~y~~sK  142 (162)
                      . .+...++-...+++|+.++..+++++..    .+ .+.+++||...+.                  +.+....|+.+|
T Consensus        72 ~-~~~~~~~p~~~~~~Nv~gt~~ll~aa~~----~g-v~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK  145 (298)
T PLN02778         72 N-VDWCESHKVETIRANVVGTLTLADVCRE----RG-LVLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTK  145 (298)
T ss_pred             C-chhhhhCHHHHHHHHHHHHHHHHHHHHH----hC-CCEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHH
Confidence            1 1122344567889999999999998744    22 2355555432210                  011235799999


Q ss_pred             HHHHHHHHHHHH
Q 042185          143 AALHSLTDTLRL  154 (162)
Q Consensus       143 aa~~~l~~~l~~  154 (162)
                      .+.+.+++.++.
T Consensus       146 ~~~E~~~~~y~~  157 (298)
T PLN02778        146 AMVEELLKNYEN  157 (298)
T ss_pred             HHHHHHHHHhhc
Confidence            999999987653

>PRK05865 hypothetical protein; Provisional

Probab=99.19  E-value=5.8e-10  Score=90.89  Aligned_cols=98  Identities=19%  Similarity=0.240  Sum_probs=76.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|+||++++++|.++|++|++++|+.+..  .  ...+.++.+|++|.+++..+++       .+|+|||+|+.... 
T Consensus         7 GATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~--~--~~~v~~v~gDL~D~~~l~~al~-------~vD~VVHlAa~~~~-   74 (854)
T PRK05865          7 GASGVLGRGLTARLLSQGHEVVGIARHRPDS--W--PSSADFIAADIRDATAVESAMT-------GADVVAHCAWVRGR-   74 (854)
T ss_pred             CCCCHHHHHHHHHHHHCcCEEEEEECCchhh--c--ccCceEEEeeCCCHHHHHHHHh-------CCCEEEECCCcccc-
Confidence            8999999999999999999999999975421  1  1357789999999988877664       47999999975321 


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccc
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSV  126 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~  126 (162)
                                  .+++|+.++..+++++    ++.+.+++|++||.
T Consensus        75 ------------~~~vNv~GT~nLLeAa----~~~gvkr~V~iSS~  104 (854)
T PRK05865         75 ------------NDHINIDGTANVLKAM----AETGTGRIVFTSSG  104 (854)
T ss_pred             ------------hHHHHHHHHHHHHHHH----HHcCCCeEEEECCc
Confidence                        3578888887776664    44455699999985

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.18  E-value=9.4e-10  Score=78.50  Aligned_cols=141  Identities=18%  Similarity=0.222  Sum_probs=86.0

Q ss_pred             CCCCchHHHHHHHHHHCCC--eEEEEecChhh---HHhhh---------------cCCceeEEEeccCChH-HH-HHHHH
Q 042185            1 CSQGGIGHALARAFAASDC--RVVATGRSKAT---MADLE---------------QDPRFFVQELDVLSEQ-SV-QNVLS   58 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~--~vi~~~r~~~~---~~~~~---------------~~~~~~~~~~D~~~~~-~i-~~~~~   58 (162)
                      ||+|.||..+..+|++++.  +|+.+.|....   .+.+.               ...++.++.+|++++. -+ ....+
T Consensus         3 GaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~~~   82 (249)
T PF07993_consen    3 GATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDEDYQ   82 (249)
T ss_dssp             -TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHHHH
T ss_pred             CCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHHhh
Confidence            8999999999999998875  89999997521   22221               1468999999999864 11 12233


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccccc--CC-----
Q 042185           59 NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVA--AP-----  131 (162)
Q Consensus        59 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~--~~-----  131 (162)
                      ++.+   .+|+|||||+.....       ..++....+|+.|+..+++.+..    .+..+++++||....  ..     
T Consensus        83 ~L~~---~v~~IiH~Aa~v~~~-------~~~~~~~~~NV~gt~~ll~la~~----~~~~~~~~iSTa~v~~~~~~~~~~  148 (249)
T PF07993_consen   83 ELAE---EVDVIIHCAASVNFN-------APYSELRAVNVDGTRNLLRLAAQ----GKRKRFHYISTAYVAGSRPGTIEE  148 (249)
T ss_dssp             HHHH---H--EEEE--SS-SBS--------S--EEHHHHHHHHHHHHHHHTS----SS---EEEEEEGGGTTS-TTT--S
T ss_pred             cccc---ccceeeecchhhhhc-------ccchhhhhhHHHHHHHHHHHHHh----ccCcceEEeccccccCCCCCcccc
Confidence            3322   579999999965332       13445677899999999988753    223399999994211  11     


Q ss_pred             -------------CCCchhhhHhHHHHHHHHHHHHHH
Q 042185          132 -------------GPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus       132 -------------~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                                   ......|..||...+.+++....+
T Consensus       149 ~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~  185 (249)
T PF07993_consen  149 KVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR  185 (249)
T ss_dssp             SS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccchhhccCCccHHHHHHHHHHHHHHHHhc
Confidence                         122347999999999999988765

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.14  E-value=1e-09  Score=88.19  Aligned_cols=136  Identities=19%  Similarity=0.181  Sum_probs=93.8

Q ss_pred             CCCCchHHHHHHHHH--HCCCeEEEEecChhh--HHhhhc---CCceeEEEeccCChHH--HHHHHHHHHHHcCCccEEE
Q 042185            1 CSQGGIGHALARAFA--ASDCRVVATGRSKAT--MADLEQ---DPRFFVQELDVLSEQS--VQNVLSNVLEKFGKIDVLV   71 (162)
Q Consensus         1 Ga~~giG~~ia~~l~--~~g~~vi~~~r~~~~--~~~~~~---~~~~~~~~~D~~~~~~--i~~~~~~~~~~~~~id~vi   71 (162)
                      ||+|.||++++++|+  ++|++|++++|+...  +.....   ...+.++.+|+++++.  ....++++    ..+|+||
T Consensus         7 GatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~~~D~Vi   82 (657)
T PRK07201          7 GGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----GDIDHVV   82 (657)
T ss_pred             CCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----cCCCEEE
Confidence            899999999999999  578999999996432  222211   1468889999998531  11122222    4789999


Q ss_pred             ECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC-------------CCchhh
Q 042185           72 NNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG-------------PWAGTY  138 (162)
Q Consensus        72 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-------------~~~~~y  138 (162)
                      |+|+.....    .   ......++|+.++..+++.+.    +.+..++|++||...+...             .....|
T Consensus        83 h~Aa~~~~~----~---~~~~~~~~nv~gt~~ll~~a~----~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y  151 (657)
T PRK07201         83 HLAAIYDLT----A---DEEAQRAANVDGTRNVVELAE----RLQAATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPY  151 (657)
T ss_pred             ECceeecCC----C---CHHHHHHHHhHHHHHHHHHHH----hcCCCeEEEEeccccccCccCccccccchhhcCCCCch
Confidence            999964321    1   134566889999888887753    3445699999987654211             123469


Q ss_pred             hHhHHHHHHHHHH
Q 042185          139 TASKAALHSLTDT  151 (162)
Q Consensus       139 ~~sKaa~~~l~~~  151 (162)
                      +.+|...+.+++.
T Consensus       152 ~~sK~~~E~~~~~  164 (657)
T PRK07201        152 HRTKFEAEKLVRE  164 (657)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999988763

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.07  E-value=4.2e-09  Score=84.90  Aligned_cols=123  Identities=19%  Similarity=0.130  Sum_probs=88.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|.||+++++.|.++|++|..                   ...|++|.+.++..+.+.     ++|+|||+|+.....
T Consensus       387 Ga~G~iG~~l~~~L~~~g~~v~~-------------------~~~~l~d~~~v~~~i~~~-----~pd~Vih~Aa~~~~~  442 (668)
T PLN02260        387 GRTGWIGGLLGKLCEKQGIAYEY-------------------GKGRLEDRSSLLADIRNV-----KPTHVFNAAGVTGRP  442 (668)
T ss_pred             CCCchHHHHHHHHHHhCCCeEEe-------------------eccccccHHHHHHHHHhh-----CCCEEEECCcccCCC
Confidence            89999999999999999987731                   124678888887777664     789999999975321


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC-----------C-------CCCchhhhHhH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA-----------P-------GPWAGTYTASK  142 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~-------~~~~~~y~~sK  142 (162)
                       -.+...++-+..+++|+.++..+++++..    . +.+++++||...+.           |       .+....|+.+|
T Consensus       443 -~~~~~~~~~~~~~~~N~~gt~~l~~a~~~----~-g~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK  516 (668)
T PLN02260        443 -NVDWCESHKVETIRANVVGTLTLADVCRE----N-GLLMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTK  516 (668)
T ss_pred             -CCChHHhCHHHHHHHHhHHHHHHHHHHHH----c-CCeEEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHHH
Confidence             12233455678889999999999999754    2 23566666543211           1       12235799999


Q ss_pred             HHHHHHHHHHH
Q 042185          143 AALHSLTDTLR  153 (162)
Q Consensus       143 aa~~~l~~~l~  153 (162)
                      .+.+.+++.+.
T Consensus       517 ~~~E~~~~~~~  527 (668)
T PLN02260        517 AMVEELLREYD  527 (668)
T ss_pred             HHHHHHHHhhh
Confidence            99999988764

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.04  E-value=2.4e-09  Score=79.30  Aligned_cols=137  Identities=20%  Similarity=0.229  Sum_probs=100.1

Q ss_pred             CCCCchHHHHHHHHHHCC--CeEEEEecChhhHH---hhh--cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASD--CRVVATGRSKATMA---DLE--QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g--~~vi~~~r~~~~~~---~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+|.+|.+++..|.+++  .+|.++|..+....   +..  ....+.++.+|+.+..++...+.       .. .++|+
T Consensus        11 GG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~-------~~-~Vvh~   82 (361)
T KOG1430|consen   11 GGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ-------GA-VVVHC   82 (361)
T ss_pred             CCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc-------Cc-eEEEe
Confidence            899999999999999998  68999998764211   111  14678889999988777666544       33 67777


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC------------CCC--chhhh
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP------------GPW--AGTYT  139 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~------------~~~--~~~y~  139 (162)
                      |....+.    .-..+-+..+++|+.++..++..+..    .+..++|++||.....+            .|.  ...|+
T Consensus        83 aa~~~~~----~~~~~~~~~~~vNV~gT~nvi~~c~~----~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~  154 (361)
T KOG1430|consen   83 AASPVPD----FVENDRDLAMRVNVNGTLNVIEACKE----LGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYG  154 (361)
T ss_pred             ccccCcc----ccccchhhheeecchhHHHHHHHHHH----hCCCEEEEecCceEEeCCeecccCCCCCCCccccccccc
Confidence            7653332    22235678899999999888888744    55679999999765432            222  24799


Q ss_pred             HhHHHHHHHHHHHH
Q 042185          140 ASKAALHSLTDTLR  153 (162)
Q Consensus       140 ~sKaa~~~l~~~l~  153 (162)
                      .||+-.+.+++...
T Consensus       155 ~sKa~aE~~Vl~an  168 (361)
T KOG1430|consen  155 ESKALAEKLVLEAN  168 (361)
T ss_pred             hHHHHHHHHHHHhc
Confidence            99999999988766

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.99  E-value=5.8e-09  Score=70.64  Aligned_cols=75  Identities=13%  Similarity=0.198  Sum_probs=63.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+ |+|.++++.|+++|++|++.+|+.+..+.+..    ...+.++.+|++|++++..+++.+.+.++++|.+|+..-.
T Consensus         7 GGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv~~vh~   85 (177)
T PRK08309          7 GGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAVAWIHS   85 (177)
T ss_pred             CcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence            666 78888999999999999999999877665433    2467888999999999999999999999999999977764

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.93  E-value=5.3e-09  Score=73.66  Aligned_cols=93  Identities=23%  Similarity=0.330  Sum_probs=63.6

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGP   81 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~   81 (162)
                      +||+||.++|++|+++|++|++++|+......  ....+.++.++     +.+...+.+.+.++.+|++|||||+....+
T Consensus        24 SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~~--~~~~v~~i~v~-----s~~~m~~~l~~~~~~~DivIh~AAvsd~~~   96 (229)
T PRK06732         24 STGQLGKIIAETFLAAGHEVTLVTTKTAVKPE--PHPNLSIIEIE-----NVDDLLETLEPLVKDHDVLIHSMAVSDYTP   96 (229)
T ss_pred             cchHHHHHHHHHHHhCCCEEEEEECcccccCC--CCCCeEEEEEe-----cHHHHHHHHHHHhcCCCEEEeCCccCCcee
Confidence            57789999999999999999999876432110  11234444432     233333444444568999999999876666


Q ss_pred             CCCCChHHHHHHHHhhhhhH
Q 042185           82 LAEVPLSAMEQTFNTNVFGP  101 (162)
Q Consensus        82 ~~~~~~~~~~~~~~~n~~~~  101 (162)
                      ....+.++|..++++|.+..
T Consensus        97 ~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         97 VYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             hhhhhhhhhhhhhhhhhhhc
Confidence            66677888888888765543

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.92  E-value=8.3e-09  Score=73.39  Aligned_cols=146  Identities=21%  Similarity=0.234  Sum_probs=110.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHh---------hhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMAD---------LEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLV   71 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~---------~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi   71 (162)
                      |-+|--|.-+++.|+++|+.|..+.|.....+.         ...+.+++.+.+|++|...+.++++++     .+|-|+
T Consensus         9 GITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v-----~PdEIY   83 (345)
T COG1089           9 GITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV-----QPDEIY   83 (345)
T ss_pred             cccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc-----Cchhhe
Confidence            456777999999999999999999886332211         122356889999999999999999998     899999


Q ss_pred             ECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccccc-----------CCCCCchhhhH
Q 042185           72 NNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVA-----------APGPWAGTYTA  140 (162)
Q Consensus        72 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-----------~~~~~~~~y~~  140 (162)
                      |.++.+..    ..+.+.-+...+++-.|++.++.+..-+=  .+..++..-||+.-+           .|+-+.++|++
T Consensus        84 NLaAQS~V----~vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAv  157 (345)
T COG1089          84 NLAAQSHV----GVSFEQPEYTADVDAIGTLRLLEAIRILG--EKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAV  157 (345)
T ss_pred             eccccccc----cccccCcceeeeechhHHHHHHHHHHHhC--CcccEEEecccHHhhcCcccCccccCCCCCCCCHHHH
Confidence            99986443    45666777888999999999988864422  224566666664322           34556789999


Q ss_pred             hHHHHHHHHHHHHHHhc
Q 042185          141 SKAALHSLTDTLRLELG  157 (162)
Q Consensus       141 sKaa~~~l~~~l~~e~~  157 (162)
                      +|.....++...+..|+
T Consensus       158 AKlYa~W~tvNYResYg  174 (345)
T COG1089         158 AKLYAYWITVNYRESYG  174 (345)
T ss_pred             HHHHHHheeeehHhhcC
Confidence            99999999888877765

>PLN02996 fatty acyl-CoA reductase

Probab=98.92  E-value=2.1e-08  Score=78.14  Aligned_cols=112  Identities=12%  Similarity=0.161  Sum_probs=76.5

Q ss_pred             CCCCchHHHHHHHHHHCC---CeEEEEecChh------hHH-hhhc-------------------CCceeEEEeccCCh-
Q 042185            1 CSQGGIGHALARAFAASD---CRVVATGRSKA------TMA-DLEQ-------------------DPRFFVQELDVLSE-   50 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g---~~vi~~~r~~~------~~~-~~~~-------------------~~~~~~~~~D~~~~-   50 (162)
                      ||+|.||+.+++.|++.+   .+|+++.|...      ++. ++..                   ..++.++.+|++.+ 
T Consensus        18 GaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~GDl~~~~   97 (491)
T PLN02996         18 GATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPGDISYDD   97 (491)
T ss_pred             CCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEecccCCcC
Confidence            899999999999999764   26788888542      111 1100                   14688999999853 


Q ss_pred             ------HHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEec
Q 042185           51 ------QSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG  124 (162)
Q Consensus        51 ------~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~is  124 (162)
                            +.++.++       ..+|+|||+|+.....       ++.+..+.+|+.++..+++.+...   .+..++|++|
T Consensus        98 LGLs~~~~~~~l~-------~~vD~ViH~AA~v~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~~k~~V~vS  160 (491)
T PLN02996         98 LGVKDSNLREEMW-------KEIDIVVNLAATTNFD-------ERYDVALGINTLGALNVLNFAKKC---VKVKMLLHVS  160 (491)
T ss_pred             CCCChHHHHHHHH-------hCCCEEEECccccCCc-------CCHHHHHHHHHHHHHHHHHHHHhc---CCCCeEEEEe
Confidence                  2233332       2589999999975321       245778899999999998887441   1234899999


Q ss_pred             ccccc
Q 042185          125 SVTVA  129 (162)
Q Consensus       125 S~~~~  129 (162)
                      |...+
T Consensus       161 T~~vy  165 (491)
T PLN02996        161 TAYVC  165 (491)
T ss_pred             eeEEe
Confidence            87644

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=98.83  E-value=1.5e-08  Score=72.06  Aligned_cols=145  Identities=19%  Similarity=0.215  Sum_probs=106.3

Q ss_pred             CCCCchHHHHHHHHHHC--CCeEEEEec-----ChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAAS--DCRVVATGR-----SKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~--g~~vi~~~r-----~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+|.||...+..++..  .++.+.++.     +...+++.....+..++..|+.+...+..++..     .++|.|+|-
T Consensus        13 gg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~-----~~id~vihf   87 (331)
T KOG0747|consen   13 GGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFET-----EEIDTVIHF   87 (331)
T ss_pred             cCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhcc-----Cchhhhhhh
Confidence            78999999999999976  566665543     344555556678999999999998777666544     389999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC------------CCCchhhhHh
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP------------GPWAGTYTAS  141 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~------------~~~~~~y~~s  141 (162)
                      |........    .-+--...+.|+.++..+........   +-.++|++|+...+..            ..+..+|+++
T Consensus        88 aa~t~vd~s----~~~~~~~~~nnil~t~~Lle~~~~sg---~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAas  160 (331)
T KOG0747|consen   88 AAQTHVDRS----FGDSFEFTKNNILSTHVLLEAVRVSG---NIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAAS  160 (331)
T ss_pred             Hhhhhhhhh----cCchHHHhcCCchhhhhHHHHHHhcc---CeeEEEEecccceecCccccccccccccCCCCCchHHH
Confidence            986543221    12223456789999988888865532   3458999998765432            2345579999


Q ss_pred             HHHHHHHHHHHHHHhc
Q 042185          142 KAALHSLTDTLRLELG  157 (162)
Q Consensus       142 Kaa~~~l~~~l~~e~~  157 (162)
                      |+|.+++.+++...|+
T Consensus       161 KaAaE~~v~Sy~~sy~  176 (331)
T KOG0747|consen  161 KAAAEMLVRSYGRSYG  176 (331)
T ss_pred             HHHHHHHHHHHhhccC
Confidence            9999999999998875

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=98.82  E-value=8e-08  Score=69.72  Aligned_cols=94  Identities=18%  Similarity=0.100  Sum_probs=64.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|.||.++++.|+++|++|+.++|+.+.......   ..  ..|+..        ....+.+..+|+|||+++.....
T Consensus         5 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~--~~~~~~--------~~~~~~~~~~D~Vvh~a~~~~~~   71 (292)
T TIGR01777         5 GGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW---EG--YKPWAP--------LAESEALEGADAVINLAGEPIAD   71 (292)
T ss_pred             cccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc---ee--eecccc--------cchhhhcCCCCEEEECCCCCccc
Confidence            899999999999999999999999998765432211   11  112221        11123345799999999964221


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVV  109 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  109 (162)
                        .+.+.+..+..+++|+.++..+++++.
T Consensus        72 --~~~~~~~~~~~~~~n~~~~~~l~~a~~   98 (292)
T TIGR01777        72 --KRWTEERKQEIRDSRIDTTRALVEAIA   98 (292)
T ss_pred             --ccCCHHHHHHHHhcccHHHHHHHHHHH
Confidence              224445667788899999888888764

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.76  E-value=3.1e-08  Score=81.86  Aligned_cols=149  Identities=15%  Similarity=0.208  Sum_probs=120.5

Q ss_pred             CCCCchHHHHHHHHHHCCC-eEEEEecChhh--HHhh------hcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEE
Q 042185            1 CSQGGIGHALARAFAASDC-RVVATGRSKAT--MADL------EQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLV   71 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-~vi~~~r~~~~--~~~~------~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi   71 (162)
                      ||-||.|.+++.+|..+|+ .+++++|+.-+  .+..      ....++.+-.-|++..+.-+.++++. .+.+++-.+|
T Consensus      1775 GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s-~kl~~vGGiF 1853 (2376)
T KOG1202|consen 1775 GGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEES-NKLGPVGGIF 1853 (2376)
T ss_pred             ccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHh-hhcccccchh
Confidence            7889999999999999999 68999997422  1111      12356777778888888888888875 4568999999


Q ss_pred             ECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHH
Q 042185           72 NNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDT  151 (162)
Q Consensus        72 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~  151 (162)
                      |.|.+...+-+++.+.++|+..-+..+.++.++-+.-.+....  -..+|.+||.+.-.+..++..|+-+.++++-++..
T Consensus      1854 nLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~--LdyFv~FSSvscGRGN~GQtNYG~aNS~MERiceq 1931 (2376)
T KOG1202|consen 1854 NLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPE--LDYFVVFSSVSCGRGNAGQTNYGLANSAMERICEQ 1931 (2376)
T ss_pred             hHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcc--cceEEEEEeecccCCCCcccccchhhHHHHHHHHH
Confidence            9999998899999999999999999999999876554333211  24899999998888889999999999999999876


Q ss_pred             H
Q 042185          152 L  152 (162)
Q Consensus       152 l  152 (162)
                      -
T Consensus      1932 R 1932 (2376)
T KOG1202|consen 1932 R 1932 (2376)
T ss_pred             h
Confidence            3

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=98.74  E-value=9.7e-08  Score=69.33  Aligned_cols=103  Identities=15%  Similarity=0.132  Sum_probs=72.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCC-ccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGK-IDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~-id~vi~~ag~~~~   79 (162)
                      ||+|.+|+.++++|.++|++|.++.|+.+...    ...+..+.+|++|.+++..+++.. +.... +|.++++++....
T Consensus         6 GatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----~~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~v~~~~~~~~~   80 (285)
T TIGR03649         6 GGTGKTASRIARLLQAASVPFLVASRSSSSSA----GPNEKHVKFDWLDEDTWDNPFSSD-DGMEPEISAVYLVAPPIPD   80 (285)
T ss_pred             cCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----CCCCccccccCCCHHHHHHHHhcc-cCcCCceeEEEEeCCCCCC
Confidence            89999999999999999999999999976532    134566789999999999888653 22234 8999998864210


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccccc
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVA  129 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  129 (162)
                               ..+            ..+.+++..++.+-.+||++||....
T Consensus        81 ---------~~~------------~~~~~i~aa~~~gv~~~V~~Ss~~~~  109 (285)
T TIGR03649        81 ---------LAP------------PMIKFIDFARSKGVRRFVLLSASIIE  109 (285)
T ss_pred             ---------hhH------------HHHHHHHHHHHcCCCEEEEeeccccC
Confidence                     011            11233344455556799999985443

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK12320 hypothetical protein; Provisional

Probab=98.70  E-value=2e-07  Score=74.97  Aligned_cols=98  Identities=16%  Similarity=0.239  Sum_probs=71.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|.||++++++|.++|++|+.++|.....    ....+.++.+|+++.. +..++       ..+|.|||+++.....
T Consensus         7 GAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~----~~~~ve~v~~Dl~d~~-l~~al-------~~~D~VIHLAa~~~~~   74 (699)
T PRK12320          7 DATGAVGRSVTRQLIAAGHTVSGIAQHPHDA----LDPRVDYVCASLRNPV-LQELA-------GEADAVIHLAPVDTSA   74 (699)
T ss_pred             CCCCHHHHHHHHHHHhCCCEEEEEeCChhhc----ccCCceEEEccCCCHH-HHHHh-------cCCCEEEEcCccCccc
Confidence            8999999999999999999999999875432    1235788999999873 32222       3689999999863210


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccc
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVT  127 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~  127 (162)
                                  ...+|+.++..+++++.    +.+ .++|++||..
T Consensus        75 ------------~~~vNv~Gt~nLleAA~----~~G-vRiV~~SS~~  104 (699)
T PRK12320         75 ------------PGGVGITGLAHVANAAA----RAG-ARLLFVSQAA  104 (699)
T ss_pred             ------------hhhHHHHHHHHHHHHHH----HcC-CeEEEEECCC
Confidence                        11468888888888763    233 4899999764

>PLN00016 RNA-binding protein; Provisional

Probab=98.69  E-value=2.5e-07  Score=69.95  Aligned_cols=117  Identities=15%  Similarity=0.097  Sum_probs=73.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhh----------cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLE----------QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVL   70 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~----------~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~v   70 (162)
                      ||+|.||..++++|+++|++|++++|+........          ....+.++.+|++|   ++.++.     ...+|+|
T Consensus        63 GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~~-----~~~~d~V  134 (378)
T PLN00016         63 GGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKVA-----GAGFDVV  134 (378)
T ss_pred             CCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhhc-----cCCccEE
Confidence            88999999999999999999999999865432211          01247788888865   333331     1378999


Q ss_pred             EECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCC--------chhhhHhH
Q 042185           71 VNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPW--------AGTYTASK  142 (162)
Q Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------~~~y~~sK  142 (162)
                      |++++..         .+           +.    +.+++.+++.+-.++|++||...+.....        ...+. +|
T Consensus       135 i~~~~~~---------~~-----------~~----~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~-sK  189 (378)
T PLN00016        135 YDNNGKD---------LD-----------EV----EPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA-GH  189 (378)
T ss_pred             EeCCCCC---------HH-----------HH----HHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcc-hH
Confidence            9987621         11           12    22333344445568999999765432211        01122 68


Q ss_pred             HHHHHHHH
Q 042185          143 AALHSLTD  150 (162)
Q Consensus       143 aa~~~l~~  150 (162)
                      ...+.+.+
T Consensus       190 ~~~E~~l~  197 (378)
T PLN00016        190 LEVEAYLQ  197 (378)
T ss_pred             HHHHHHHH
Confidence            77777654

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.64  E-value=4.8e-07  Score=64.58  Aligned_cols=136  Identities=18%  Similarity=0.204  Sum_probs=94.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhh----HHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKAT----MADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~----~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||.|.||+++|.+|..+|..|+++|--...    +.......++..+.-|+..+     ++..       +|.|+|.|..
T Consensus        34 GgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~e-------vD~IyhLAap  101 (350)
T KOG1429|consen   34 GGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLKE-------VDQIYHLAAP  101 (350)
T ss_pred             cCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHHH-------hhhhhhhccC
Confidence            899999999999999999999999863322    22222345666666666544     3443       4888998886


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC----------------CCCCchhhhH
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA----------------PGPWAGTYTA  140 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----------------~~~~~~~y~~  140 (162)
                      ..+..+...    -.+++..|..++.+.+..+.     +-+.++++.|++..+.                |....+.|.-
T Consensus       102 asp~~y~~n----pvktIktN~igtln~lglak-----rv~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cyde  172 (350)
T KOG1429|consen  102 ASPPHYKYN----PVKTIKTNVIGTLNMLGLAK-----RVGARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDE  172 (350)
T ss_pred             CCCcccccC----ccceeeecchhhHHHHHHHH-----HhCceEEEeecccccCCcccCCCccccccccCcCCchhhhhH
Confidence            544322211    23567889999988887753     3347888888876542                2234567999


Q ss_pred             hHHHHHHHHHHHHHHhc
Q 042185          141 SKAALHSLTDTLRLELG  157 (162)
Q Consensus       141 sKaa~~~l~~~l~~e~~  157 (162)
                      .|...+.|+....++.+
T Consensus       173 gKr~aE~L~~~y~k~~g  189 (350)
T KOG1429|consen  173 GKRVAETLCYAYHKQEG  189 (350)
T ss_pred             HHHHHHHHHHHhhcccC
Confidence            99999999998877653

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.63  E-value=4.6e-07  Score=69.96  Aligned_cols=113  Identities=24%  Similarity=0.247  Sum_probs=73.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||.+|+|.++++.|...|+.|+.+.+........ ....+.-+-+|.+..+..                           
T Consensus        45 ~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~---------------------------   96 (450)
T PRK08261         45 GGAGRLAEALAALLAGLGYDVVANNDGGLTWAAG-WGDRFGALVFDATGITDP---------------------------   96 (450)
T ss_pred             ccCchhHHHHHHHHhhCCCeeeecCccccccccC-cCCcccEEEEECCCCCCH---------------------------
Confidence            5678999999999999999999887654411100 111222222233222221                           


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccCC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG  160 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~g  160 (162)
                             +++.        +.+.+++..++.|.  ..|+||+++|.....   ....|+++|+++.+|+|++++|+ +.|
T Consensus        97 -------~~l~--------~~~~~~~~~l~~l~--~~griv~i~s~~~~~---~~~~~~~akaal~gl~rsla~E~-~~g  155 (450)
T PRK08261         97 -------ADLK--------ALYEFFHPVLRSLA--PCGRVVVLGRPPEAA---ADPAAAAAQRALEGFTRSLGKEL-RRG  155 (450)
T ss_pred             -------HHHH--------HHHHHHHHHHHhcc--CCCEEEEEccccccC---CchHHHHHHHHHHHHHHHHHHHh-hcC
Confidence                   2221        23345666677663  457999999976653   34569999999999999999999 667


Q ss_pred             CC
Q 042185          161 ID  162 (162)
Q Consensus       161 i~  162 (162)
                      |+
T Consensus       156 i~  157 (450)
T PRK08261        156 AT  157 (450)
T ss_pred             CE
Confidence            64

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=98.58  E-value=1.9e-06  Score=74.81  Aligned_cols=140  Identities=18%  Similarity=0.184  Sum_probs=92.4

Q ss_pred             CCCCchHHHHHHHHHHCC----CeEEEEecChhhH---Hhhhc------------CCceeEEEeccCChHH--HHHHHHH
Q 042185            1 CSQGGIGHALARAFAASD----CRVVATGRSKATM---ADLEQ------------DPRFFVQELDVLSEQS--VQNVLSN   59 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g----~~vi~~~r~~~~~---~~~~~------------~~~~~~~~~D~~~~~~--i~~~~~~   59 (162)
                      ||+|.||..+++.|++++    ++|+...|+....   +.+..            ..++.++.+|++++.-  -...+++
T Consensus       978 GatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl~~~~~~~ 1057 (1389)
T TIGR03443       978 GATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGLSDEKWSD 1057 (1389)
T ss_pred             CCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCcCHHHHHH
Confidence            899999999999999887    6888888874321   11111            1368889999986521  0112233


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC--------
Q 042185           60 VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP--------  131 (162)
Q Consensus        60 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--------  131 (162)
                      +.   ..+|+|||+|+....    ..   .+......|+.++..+++.+..    .+..+++++||...+.+        
T Consensus      1058 l~---~~~d~iiH~Aa~~~~----~~---~~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~vSS~~v~~~~~~~~~~~ 1123 (1389)
T TIGR03443      1058 LT---NEVDVIIHNGALVHW----VY---PYSKLRDANVIGTINVLNLCAE----GKAKQFSFVSSTSALDTEYYVNLSD 1123 (1389)
T ss_pred             HH---hcCCEEEECCcEecC----cc---CHHHHHHhHHHHHHHHHHHHHh----CCCceEEEEeCeeecCcccccchhh
Confidence            32   368999999986432    11   2344456799999998887643    33458999999754421        


Q ss_pred             ---------C-----------CCchhhhHhHHHHHHHHHHHHH
Q 042185          132 ---------G-----------PWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus       132 ---------~-----------~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                               .           .....|+.||.+.+.++...+.
T Consensus      1124 ~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~ 1166 (1389)
T TIGR03443      1124 ELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK 1166 (1389)
T ss_pred             hhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh
Confidence                     0           0123599999999998887543

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.55  E-value=3.3e-06  Score=62.68  Aligned_cols=141  Identities=18%  Similarity=0.225  Sum_probs=96.2

Q ss_pred             CCCCchHHHHHHHHHHC-CCeEEEEecChh------hHHhhhc---------CCceeEEEeccCChH-HH-HHHHHHHHH
Q 042185            1 CSQGGIGHALARAFAAS-DCRVVATGRSKA------TMADLEQ---------DPRFFVQELDVLSEQ-SV-QNVLSNVLE   62 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~-g~~vi~~~r~~~------~~~~~~~---------~~~~~~~~~D~~~~~-~i-~~~~~~~~~   62 (162)
                      ||+|.+|..+..+|..+ .++|+...|...      ++++...         ..++.++..|++.++ .+ +.-.+.+. 
T Consensus         7 GATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~~~~La-   85 (382)
T COG3320           7 GATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERTWQELA-   85 (382)
T ss_pred             cCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHHHHHHh-
Confidence            89999999999999876 458988877433      3333322         368899999998443 11 22223332 


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC----------
Q 042185           63 KFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG----------  132 (162)
Q Consensus        63 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------  132 (162)
                        ..+|.||||++....       .....+....|+.|+..+++.+..    .+...+.++||.+.....          
T Consensus        86 --~~vD~I~H~gA~Vn~-------v~pYs~L~~~NVlGT~evlrLa~~----gk~Kp~~yVSsisv~~~~~~~~~~~~~~  152 (382)
T COG3320          86 --ENVDLIIHNAALVNH-------VFPYSELRGANVLGTAEVLRLAAT----GKPKPLHYVSSISVGETEYYSNFTVDFD  152 (382)
T ss_pred             --hhcceEEecchhhcc-------cCcHHHhcCcchHhHHHHHHHHhc----CCCceeEEEeeeeeccccccCCCccccc
Confidence              357999999986432       123456778899999998888633    334469999998754321          


Q ss_pred             ----------CCchhhhHhHHHHHHHHHHHHHH
Q 042185          133 ----------PWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus       133 ----------~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                                .....|+-||.+.+-+++.....
T Consensus       153 ~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r  185 (382)
T COG3320         153 EISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR  185 (382)
T ss_pred             cccccccccCccCCCcchhHHHHHHHHHHHhhc
Confidence                      12356999999999999876544

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.54  E-value=8.6e-07  Score=63.10  Aligned_cols=134  Identities=17%  Similarity=0.108  Sum_probs=78.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|-||++++.+|.+.|+.|+++.|+.+..+...     ...   +...+.+....+      .++|.|||.||..-..
T Consensus         5 GgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~-----~~~---v~~~~~~~~~~~------~~~DavINLAG~~I~~   70 (297)
T COG1090           5 GGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL-----HPN---VTLWEGLADALT------LGIDAVINLAGEPIAE   70 (297)
T ss_pred             ccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc-----Ccc---ccccchhhhccc------CCCCEEEECCCCcccc
Confidence            89999999999999999999999999877544321     100   111111211111      1789999999963221


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhH----hHHHHHHHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTA----SKAALHSLTDTLRL  154 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~----sKaa~~~l~~~l~~  154 (162)
                      +  .++.+.-+..++.    -+..++.+.+.+.+.+ +.++.+-+|..|+++......|.=    ..-++..+|+.+-.
T Consensus        71 r--rWt~~~K~~i~~S----Ri~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~  143 (297)
T COG1090          71 R--RWTEKQKEEIRQS----RINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEE  143 (297)
T ss_pred             c--cCCHHHHHHHHHH----HhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHH
Confidence            1  2666666666554    4445566666555333 344555556677877544333322    23344445544433

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.53  E-value=2.2e-06  Score=61.42  Aligned_cols=125  Identities=18%  Similarity=0.177  Sum_probs=87.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh----hHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA----TMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~----~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|.+|+-+|.+|++.|..|++-.|..+    .+.-+-+-+++.+...|+.|+++|+++++.-       ++|||..|-
T Consensus        68 GAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~s-------NVVINLIGr  140 (391)
T KOG2865|consen   68 GATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHS-------NVVINLIGR  140 (391)
T ss_pred             cccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhC-------cEEEEeecc
Confidence            89999999999999999999999998643    1222223478999999999999999998876       899999996


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHH
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALH  146 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~  146 (162)
                      -.++.-.        ..-++|+.+.-.+.+.+    ++.+--++|.+|+..+...  ..+-|--+|++-+
T Consensus       141 d~eTknf--------~f~Dvn~~~aerlAric----ke~GVerfIhvS~Lganv~--s~Sr~LrsK~~gE  196 (391)
T KOG2865|consen  141 DYETKNF--------SFEDVNVHIAERLARIC----KEAGVERFIHVSCLGANVK--SPSRMLRSKAAGE  196 (391)
T ss_pred             ccccCCc--------ccccccchHHHHHHHHH----HhhChhheeehhhcccccc--ChHHHHHhhhhhH
Confidence            4332211        12245666666666665    3345568999988764422  2233445555444

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.50  E-value=8.3e-07  Score=67.34  Aligned_cols=68  Identities=25%  Similarity=0.278  Sum_probs=52.0

Q ss_pred             CCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            3 QGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      ||.+|.++|++|+++|++|++++++.+ ..     .......+|+++.+++...+.   +.++++|++|+|||+...
T Consensus       213 SG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-----~~~~~~~~dv~~~~~~~~~v~---~~~~~~DilI~~Aav~d~  280 (399)
T PRK05579        213 SGKMGYALARAAARRGADVTLVSGPVN-LP-----TPAGVKRIDVESAQEMLDAVL---AALPQADIFIMAAAVADY  280 (399)
T ss_pred             cchHHHHHHHHHHHCCCEEEEeCCCcc-cc-----CCCCcEEEccCCHHHHHHHHH---HhcCCCCEEEEccccccc
Confidence            555999999999999999999998753 11     111245689998888766665   457899999999998544

>PLN02503 fatty acyl-CoA reductase 2

Probab=98.42  E-value=3.7e-06  Score=66.95  Aligned_cols=116  Identities=13%  Similarity=0.212  Sum_probs=77.3

Q ss_pred             CCCCchHHHHHHHHHHCCC---eEEEEecChh------hHH-hhh---------c----------CCceeEEEeccCChH
Q 042185            1 CSQGGIGHALARAFAASDC---RVVATGRSKA------TMA-DLE---------Q----------DPRFFVQELDVLSEQ   51 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~---~vi~~~r~~~------~~~-~~~---------~----------~~~~~~~~~D~~~~~   51 (162)
                      ||+|.||+.++++|++.+.   +|+++.|...      ++. ++.         +          ..++.++..|+++++
T Consensus       126 GaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~GDl~d~~  205 (605)
T PLN02503        126 GATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVVGNVCESN  205 (605)
T ss_pred             CCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEEeeCCCcc
Confidence            8999999999999998643   6788888532      111 110         0          236788999999873


Q ss_pred             -HH-HHHHHHHHHHcCCccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccccc
Q 042185           52 -SV-QNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVA  129 (162)
Q Consensus        52 -~i-~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  129 (162)
                       .+ ....+.+.+   .+|+|||+|+....       .++++..+++|+.++..+++.+...   .+..++|++||...+
T Consensus       206 LGLs~~~~~~L~~---~vDiVIH~AA~v~f-------~~~~~~a~~vNV~GT~nLLelA~~~---~~lk~fV~vSTayVy  272 (605)
T PLN02503        206 LGLEPDLADEIAK---EVDVIINSAANTTF-------DERYDVAIDINTRGPCHLMSFAKKC---KKLKLFLQVSTAYVN  272 (605)
T ss_pred             cCCCHHHHHHHHh---cCCEEEECcccccc-------ccCHHHHHHHHHHHHHHHHHHHHHc---CCCCeEEEccCceee
Confidence             00 111222222   58999999997532       1346778899999999998886442   223479999986543

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.38  E-value=1.6e-06  Score=65.17  Aligned_cols=69  Identities=20%  Similarity=0.330  Sum_probs=60.6

Q ss_pred             CCCchHHHHHHHHHHCC-CeEEEEecChhhHHhhhcC--CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            2 SQGGIGHALARAFAASD-CRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g-~~vi~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      |+|++|+.+|..|+++| .+|.+++|+.++++++...  .++....+|+.+.+++.+++++.       |+||+++...
T Consensus         8 GaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~-------d~VIn~~p~~   79 (389)
T COG1748           8 GAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDF-------DLVINAAPPF   79 (389)
T ss_pred             CCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcC-------CEEEEeCCch
Confidence            56999999999999999 7999999999998888664  48999999999998888887664       9999999763

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.30  E-value=3.9e-05  Score=51.69  Aligned_cols=104  Identities=14%  Similarity=0.183  Sum_probs=75.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||||-.|+.+.++...+|+.|..+.||+.++...   ..+...+.|+.|++++.+.+       -..|.||..-|....+
T Consensus         7 gAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~---~~~~i~q~Difd~~~~a~~l-------~g~DaVIsA~~~~~~~   76 (211)
T COG2910           7 GASGKAGSRILKEALKRGHEVTAIVRNASKLAAR---QGVTILQKDIFDLTSLASDL-------AGHDAVISAFGAGASD   76 (211)
T ss_pred             ecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc---ccceeecccccChhhhHhhh-------cCCceEEEeccCCCCC
Confidence            7999999999999999999999999998876554   45678889999988764433       3669999988865322


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA  130 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  130 (162)
                      .      +  +....        .++.++..++.....++++++...+.+
T Consensus        77 ~------~--~~~~k--------~~~~li~~l~~agv~RllVVGGAGSL~  110 (211)
T COG2910          77 N------D--ELHSK--------SIEALIEALKGAGVPRLLVVGGAGSLE  110 (211)
T ss_pred             h------h--HHHHH--------HHHHHHHHHhhcCCeeEEEEcCccceE
Confidence            1      1  11111        145566666665678999998766553

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.23  E-value=4.7e-06  Score=63.26  Aligned_cols=69  Identities=28%  Similarity=0.398  Sum_probs=55.1

Q ss_pred             CCCCchHHHHHHHHHHCC-C-eEEEEecChhhHHhhhc---CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASD-C-RVVATGRSKATMADLEQ---DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g-~-~vi~~~r~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |+ |.+|+.+++.|++++ . +|++.+|+.++++++.+   ..++.+..+|+.|.+++.+++++.       |+||+++|
T Consensus         5 G~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-------dvVin~~g   76 (386)
T PF03435_consen    5 GA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGC-------DVVINCAG   76 (386)
T ss_dssp             ---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTS-------SEEEE-SS
T ss_pred             cC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcC-------CEEEECCc
Confidence            66 999999999999886 4 89999999999888764   478999999999998877776554       99999998


Q ss_pred             CC
Q 042185           76 VQ   77 (162)
Q Consensus        76 ~~   77 (162)
                      ..
T Consensus        77 p~   78 (386)
T PF03435_consen   77 PF   78 (386)
T ss_dssp             GG
T ss_pred             cc
Confidence            64

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.22  E-value=6.3e-06  Score=56.69  Aligned_cols=70  Identities=17%  Similarity=0.188  Sum_probs=53.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC----CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD----PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|++|+.+++.|+++|++|++++|+.++.+++.+.    .......+|..+.+++...+.       ..|+||++...
T Consensus        35 GgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------~~diVi~at~~  107 (194)
T cd01078          35 GGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIK-------GADVVFAAGAA  107 (194)
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh-------cCCEEEECCCC
Confidence            7889999999999999999999999998877665432    234566678888777666553       45888887765


Q ss_pred             C
Q 042185           77 Q   77 (162)
Q Consensus        77 ~   77 (162)
                      .
T Consensus       108 g  108 (194)
T cd01078         108 G  108 (194)
T ss_pred             C
Confidence            3

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.19  E-value=8.4e-06  Score=61.76  Aligned_cols=70  Identities=20%  Similarity=0.274  Sum_probs=52.1

Q ss_pred             CCc-hHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHH-HHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            3 QGG-IGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSV-QNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         3 ~~g-iG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i-~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      |+| +|.+++++|..+|++|+++.++....      .......+|+++.+++ +.++++.   ++++|++|+|||+....
T Consensus       209 SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~------~~~~~~~~~v~~~~~~~~~~~~~~---~~~~D~~i~~Aavsd~~  279 (390)
T TIGR00521       209 SSGKMGLALAEAAYKRGADVTLITGPVSLL------TPPGVKSIKVSTAEEMLEAALNEL---AKDFDIFISAAAVADFK  279 (390)
T ss_pred             CcchHHHHHHHHHHHCCCEEEEeCCCCccC------CCCCcEEEEeccHHHHHHHHHHhh---cccCCEEEEcccccccc
Confidence            445 99999999999999999988765321      1113356899998888 6565443   46899999999987554


Q ss_pred             C
Q 042185           81 P   81 (162)
Q Consensus        81 ~   81 (162)
                      +
T Consensus       280 ~  280 (390)
T TIGR00521       280 P  280 (390)
T ss_pred             c
Confidence            4

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.18  E-value=0.0001  Score=52.92  Aligned_cols=127  Identities=19%  Similarity=0.121  Sum_probs=84.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|.+|.+++++|.++|++|.+..|+.+......  ..+.+...|+.+++.+...++..       |.+++..+... .
T Consensus         7 GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~--~~v~~~~~d~~~~~~l~~a~~G~-------~~~~~i~~~~~-~   76 (275)
T COG0702           7 GATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA--GGVEVVLGDLRDPKSLVAGAKGV-------DGVLLISGLLD-G   76 (275)
T ss_pred             ecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc--CCcEEEEeccCCHhHHHHHhccc-------cEEEEEecccc-c
Confidence            89999999999999999999999999999888776  78889999999998877776554       77777777543 1


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      .. ..-.        ..........+..-     .....++.+|...+..  .....|..+|...+...+...
T Consensus        77 ~~-~~~~--------~~~~~~~~~a~~a~-----~~~~~~~~~s~~~~~~--~~~~~~~~~~~~~e~~l~~sg  133 (275)
T COG0702          77 SD-AFRA--------VQVTAVVRAAEAAG-----AGVKHGVSLSVLGADA--ASPSALARAKAAVEAALRSSG  133 (275)
T ss_pred             cc-chhH--------HHHHHHHHHHHHhc-----CCceEEEEeccCCCCC--CCccHHHHHHHHHHHHHHhcC
Confidence            11 1111        11111222222211     1223566666544433  244678888888887766543

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.11  E-value=0.00011  Score=51.82  Aligned_cols=69  Identities=20%  Similarity=0.209  Sum_probs=53.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhh--HHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKAT--MADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~--~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      ||+|.+|+.+++.|.+.+++|.++.|+...  .++++. ..+.++.+|+.|.+++.++++       ..|.+|++.+..
T Consensus         5 GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~-~g~~vv~~d~~~~~~l~~al~-------g~d~v~~~~~~~   75 (233)
T PF05368_consen    5 GATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQA-LGAEVVEADYDDPESLVAALK-------GVDAVFSVTPPS   75 (233)
T ss_dssp             TTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHH-TTTEEEES-TT-HHHHHHHHT-------TCSEEEEESSCS
T ss_pred             CCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhc-ccceEeecccCCHHHHHHHHc-------CCceEEeecCcc
Confidence            899999999999999999999999998743  333333 355677999998887777765       559999888854

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.04  E-value=1.5e-05  Score=58.28  Aligned_cols=69  Identities=17%  Similarity=0.267  Sum_probs=49.3

Q ss_pred             CCCCchHHHHHHHHHHCCCe-EEEEecCh---hhHHhhhcC-----CceeEEEeccCChHHHHHHHHHHHHHcCCccEEE
Q 042185            1 CSQGGIGHALARAFAASDCR-VVATGRSK---ATMADLEQD-----PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLV   71 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~-vi~~~r~~---~~~~~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi   71 (162)
                      || ||+|++++..|++.|++ |++++|+.   ++.+++.++     .......+|+++.++++..+.       ..|++|
T Consensus       133 GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~-------~~DilI  204 (289)
T PRK12548        133 GA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA-------SSDILV  204 (289)
T ss_pred             CC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc-------cCCEEE
Confidence            44 79999999999999995 99999986   454444321     234455678877666554332       459999


Q ss_pred             ECCCCC
Q 042185           72 NNAGVQ   77 (162)
Q Consensus        72 ~~ag~~   77 (162)
                      ||....
T Consensus       205 NaTp~G  210 (289)
T PRK12548        205 NATLVG  210 (289)
T ss_pred             EeCCCC
Confidence            999764

>PRK09620 hypothetical protein; Provisional

Probab=97.96  E-value=1.8e-05  Score=55.78  Aligned_cols=73  Identities=15%  Similarity=0.205  Sum_probs=43.1

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHh-hhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMAD-LEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~-~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      +||.||.++|++|.++|+.|+++++....... .........+..    ..++...+.++.+. .++|+|||+|+...+
T Consensus        27 SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s----~~d~~~~l~~~~~~-~~~D~VIH~AAvsD~  100 (229)
T PRK09620         27 AKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEG----IIDLQDKMKSIITH-EKVDAVIMAAAGSDW  100 (229)
T ss_pred             CcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEec----HHHHHHHHHHHhcc-cCCCEEEECccccce
Confidence            47999999999999999999988764321111 111122223332    22222233333221 268999999998543

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=97.93  E-value=0.00018  Score=54.49  Aligned_cols=124  Identities=17%  Similarity=0.183  Sum_probs=79.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc----CCceeEEEeccCChHH-HHHHHHHHHHHcC-CccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ----DPRFFVQELDVLSEQS-VQNVLSNVLEKFG-KIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~-i~~~~~~~~~~~~-~id~vi~~a   74 (162)
                      ||+|.+|+-+++.|.++|+.|..+.|+.+..+....    +.....+..|.....+ +..++..+    + ...+++-++
T Consensus        86 GatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~----~~~~~~v~~~~  161 (411)
T KOG1203|consen   86 GATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAV----PKGVVIVIKGA  161 (411)
T ss_pred             cCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhc----cccceeEEecc
Confidence            899999999999999999999999999887776644    3445555555544433 33333332    2 345667777


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhh
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYT  139 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~  139 (162)
                      |..+...       +..--..+++.+..++++++    +..+-.++|+++|..+.........+.
T Consensus       162 ggrp~~e-------d~~~p~~VD~~g~knlvdA~----~~aGvk~~vlv~si~~~~~~~~~~~~~  215 (411)
T KOG1203|consen  162 GGRPEEE-------DIVTPEKVDYEGTKNLVDAC----KKAGVKRVVLVGSIGGTKFNQPPNILL  215 (411)
T ss_pred             cCCCCcc-------cCCCcceecHHHHHHHHHHH----HHhCCceEEEEEeecCcccCCCchhhh
Confidence            7543321       11122345566777777776    334556999999987776554444333

>PLN00106 malate dehydrogenase

Probab=97.89  E-value=0.00014  Score=53.88  Aligned_cols=139  Identities=17%  Similarity=0.149  Sum_probs=82.6

Q ss_pred             CCCCchHHHHHHHHHHCCC--eEEEEecChhhHH--hhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDC--RVVATGRSKATMA--DLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~--~vi~~~r~~~~~~--~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |++|.+|..++..|+.++.  +++++|.++...+  ++.+ ........++++.+++...       +...|+||++||.
T Consensus        25 GaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~-~~~~~~i~~~~~~~d~~~~-------l~~aDiVVitAG~   96 (323)
T PLN00106         25 GAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSH-INTPAQVRGFLGDDQLGDA-------LKGADLVIIPAGV   96 (323)
T ss_pred             CCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhh-CCcCceEEEEeCCCCHHHH-------cCCCCEEEEeCCC
Confidence            6679999999999997764  7999999772111  1111 1111122243333333222       3467999999997


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccccc-------------CCCCCchhhhHhHH
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVA-------------APGPWAGTYTASKA  143 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-------------~~~~~~~~y~~sKa  143 (162)
                      ... +  .   ..+...+..|+.....+.+.    +.+.....+++++|....             .+.|+...|+.++.
T Consensus        97 ~~~-~--g---~~R~dll~~N~~i~~~i~~~----i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~L  166 (323)
T PLN00106         97 PRK-P--G---MTRDDLFNINAGIVKTLCEA----VAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTL  166 (323)
T ss_pred             CCC-C--C---CCHHHHHHHHHHHHHHHHHH----HHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecc
Confidence            432 1  1   33566777777765444444    454444456555554332             24566778999875


Q ss_pred             HHHHHHHHHHHHhc
Q 042185          144 ALHSLTDTLRLELG  157 (162)
Q Consensus       144 a~~~l~~~l~~e~~  157 (162)
                      -...|-..++.++.
T Consensus       167 Ds~Rl~~~lA~~lg  180 (323)
T PLN00106        167 DVVRANTFVAEKKG  180 (323)
T ss_pred             hHHHHHHHHHHHhC
Confidence            55567777777664

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.85  E-value=0.0018  Score=51.47  Aligned_cols=151  Identities=20%  Similarity=0.200  Sum_probs=96.9

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChh--hHHh---hh-----cCCceeEEEeccCChHHHHHHHHHHHHHcC------
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKA--TMAD---LE-----QDPRFFVQELDVLSEQSVQNVLSNVLEKFG------   65 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~--~~~~---~~-----~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~------   65 (162)
                      +-+.||-+++..|+..|++||++..+..  +.+-   +.     ......++..++.++.+++.+++.+-...-      
T Consensus       405 ~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg~eq~~t~g~~  484 (866)
T COG4982         405 SKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIGDEQTETVGPQ  484 (866)
T ss_pred             CCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhccccccccCCc
Confidence            4578999999999999999998876533  2221   11     135677889999999999999999965321      


Q ss_pred             --------CccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CC--eEEEeccccccCC-CC
Q 042185           66 --------KIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KG--KIINVGSVTVAAP-GP  133 (162)
Q Consensus        66 --------~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~--~iv~isS~~~~~~-~~  133 (162)
                              .++.+|=-|.....+.+.+...+ -+.-+++-+.+...++-.+.+.-.+++ ..  .+|.-.|.  ..+ +.
T Consensus       485 s~~~k~a~~ptll~PFAAp~v~G~l~~agsr-aE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPgSP--NrG~FG  561 (866)
T COG4982         485 SIHIKLAWTPTLLFPFAAPRVSGELADAGSR-AEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPGSP--NRGMFG  561 (866)
T ss_pred             ceecccccCcceeeecccCCccCccccCCch-HHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecCCC--CCCccC
Confidence                    46777766666555555555432 244455556666565555444322221 22  34444442  222 23


Q ss_pred             CchhhhHhHHHHHHHHHHHHHH
Q 042185          134 WAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus       134 ~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      +-..|+-+|++++.++.-+..|
T Consensus       562 gDGaYgEsK~aldav~~RW~sE  583 (866)
T COG4982         562 GDGAYGESKLALDAVVNRWHSE  583 (866)
T ss_pred             CCcchhhHHHHHHHHHHHhhcc
Confidence            4568999999999998766554

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.75  E-value=8.8e-05  Score=54.84  Aligned_cols=70  Identities=16%  Similarity=0.247  Sum_probs=59.2

Q ss_pred             CCCCchHHHHHHHHHH----CCCeEEEEecChhhHHhhhcC---------CceeEEEeccCChHHHHHHHHHHHHHcCCc
Q 042185            1 CSQGGIGHALARAFAA----SDCRVVATGRSKATMADLEQD---------PRFFVQELDVLSEQSVQNVLSNVLEKFGKI   67 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~----~g~~vi~~~r~~~~~~~~~~~---------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i   67 (162)
                      ||||.-|.-+++++.+    .+..+.+.+||++++++..++         .+...+.+|.+|++++.++.++.       
T Consensus        12 GASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~-------   84 (423)
T KOG2733|consen   12 GASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQA-------   84 (423)
T ss_pred             ccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhh-------
Confidence            8999999999999998    688999999999988876431         22337889999999999998887       


Q ss_pred             cEEEECCCCC
Q 042185           68 DVLVNNAGVQ   77 (162)
Q Consensus        68 d~vi~~ag~~   77 (162)
                      .+++||+|..
T Consensus        85 ~vivN~vGPy   94 (423)
T KOG2733|consen   85 RVIVNCVGPY   94 (423)
T ss_pred             EEEEeccccc
Confidence            7899999964

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.62  E-value=0.0018  Score=47.26  Aligned_cols=72  Identities=19%  Similarity=0.202  Sum_probs=48.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+++++|.++++.+...|++|+.++++.++.+.+... ... ..+|..+.+..+.+.+...  ...+|.+++++|.
T Consensus       152 g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~-g~~-~~~~~~~~~~~~~~~~~~~--~~~~d~vi~~~~~  223 (325)
T cd08253         152 GGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQA-GAD-AVFNYRAEDLADRILAATA--GQGVDVIIEVLAN  223 (325)
T ss_pred             cCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc-CCC-EEEeCCCcCHHHHHHHHcC--CCceEEEEECCch
Confidence            6789999999999999999999999988776666432 222 2245555444444332221  1369999999873

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.62  E-value=0.00015  Score=46.97  Aligned_cols=67  Identities=16%  Similarity=0.289  Sum_probs=46.3

Q ss_pred             CCCchHHHHHHHHHHCCCe-EEEEecChhhHHhhhcCC-ceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            2 SQGGIGHALARAFAASDCR-VVATGRSKATMADLEQDP-RFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~-vi~~~r~~~~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      |+||.|++++..|.+.|++ |.++.|+.++.+++.+.. ...+..+++.+.   ...       ....|++|++.+...
T Consensus        19 GaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~---~~~-------~~~~DivI~aT~~~~   87 (135)
T PF01488_consen   19 GAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDL---EEA-------LQEADIVINATPSGM   87 (135)
T ss_dssp             SSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGH---CHH-------HHTESEEEE-SSTTS
T ss_pred             CCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHH---HHH-------HhhCCeEEEecCCCC
Confidence            5689999999999999995 999999999888776543 222223333332   211       236799999998643

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.58  E-value=0.0014  Score=46.34  Aligned_cols=27  Identities=26%  Similarity=0.327  Sum_probs=24.5

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecCh
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSK   28 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~   28 (162)
                      |.||+|..+++.|+..|. +++++|.+.
T Consensus        18 G~GGvGs~va~~Lar~GVg~i~LvD~D~   45 (231)
T cd00755          18 GLGGVGSWAAEALARSGVGKLTLIDFDV   45 (231)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence            678999999999999998 899999864

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.53  E-value=0.0014  Score=47.28  Aligned_cols=27  Identities=22%  Similarity=0.323  Sum_probs=24.3

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecCh
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSK   28 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~   28 (162)
                      |.||+|..+++.|+..|. ++.++|.+.
T Consensus        37 G~GGVGs~vae~Lar~GVg~itLiD~D~   64 (268)
T PRK15116         37 GIGGVGSWAAEALARTGIGAITLIDMDD   64 (268)
T ss_pred             CcCHHHHHHHHHHHHcCCCEEEEEeCCE
Confidence            678999999999999996 899999874

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.46  E-value=0.0086  Score=45.44  Aligned_cols=67  Identities=10%  Similarity=0.122  Sum_probs=47.0

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |.|.+|+..++.+...|++|++++|+.++++.+...... .+..+..+.+++.+.+       ...|++|++++.
T Consensus       174 GaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~-~v~~~~~~~~~l~~~l-------~~aDvVI~a~~~  240 (370)
T TIGR00518       174 GGGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGG-RIHTRYSNAYEIEDAV-------KRADLLIGAVLI  240 (370)
T ss_pred             cCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCc-eeEeccCCHHHHHHHH-------ccCCEEEEcccc
Confidence            457899999999999999999999998877766443222 1223444544443332       356999999865

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.38  E-value=0.00069  Score=47.77  Aligned_cols=69  Identities=20%  Similarity=0.313  Sum_probs=54.5

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHh-hhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMAD-LEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~-~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |.|-+|..+|+.|.++|++|++++++++..++ ..++.....+.+|-++++.++++-      ....|.++-..|.
T Consensus         7 G~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~ag------i~~aD~vva~t~~   76 (225)
T COG0569           7 GAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAG------IDDADAVVAATGN   76 (225)
T ss_pred             CCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcC------CCcCCEEEEeeCC
Confidence            57889999999999999999999999999887 444677888889999887665551      1245777766654

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.37  E-value=0.00089  Score=41.92  Aligned_cols=67  Identities=19%  Similarity=0.253  Sum_probs=52.6

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |.|.+|+.+++.|.+.+.+|++++++++..+++.++. +.++.+|.++++.++++  .    ..+.+.++....
T Consensus         5 G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~-~~~i~gd~~~~~~l~~a--~----i~~a~~vv~~~~   71 (116)
T PF02254_consen    5 GYGRIGREIAEQLKEGGIDVVVIDRDPERVEELREEG-VEVIYGDATDPEVLERA--G----IEKADAVVILTD   71 (116)
T ss_dssp             S-SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTT-SEEEES-TTSHHHHHHT--T----GGCESEEEEESS
T ss_pred             cCCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcc-cccccccchhhhHHhhc--C----ccccCEEEEccC
Confidence            4578999999999997779999999999888877655 77999999998876665  1    126677777765

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=97.36  E-value=0.00059  Score=48.35  Aligned_cols=137  Identities=19%  Similarity=0.152  Sum_probs=90.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh-----hhHHhhhc------CCceeEEEeccCChHHHHHHHHHHHHHcCCccE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK-----ATMADLEQ------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDV   69 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~-----~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~   69 (162)
                      |-+|-=|.-+++.|+.+|+.|..+-|..     .+++.+-.      +......-.|++|...+.+++..+     +++-
T Consensus        35 GItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i-----kPtE  109 (376)
T KOG1372|consen   35 GITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI-----KPTE  109 (376)
T ss_pred             cccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc-----Cchh
Confidence            3355668999999999999998777643     34444322      356778889999999999999888     7888


Q ss_pred             EEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccc-----------ccCCCCCchhh
Q 042185           70 LVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVT-----------VAAPGPWAGTY  138 (162)
Q Consensus        70 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~-----------~~~~~~~~~~y  138 (162)
                      +.|.|.....    .++.|--+-.-+++..|++.++.+...--.. .+-++---|+..           -..|+-+.++|
T Consensus       110 iYnLaAQSHV----kvSFdlpeYTAeVdavGtLRlLdAi~~c~l~-~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPY  184 (376)
T KOG1372|consen  110 VYNLAAQSHV----KVSFDLPEYTAEVDAVGTLRLLDAIRACRLT-EKVRFYQASTSELYGKVQEIPQSETTPFYPRSPY  184 (376)
T ss_pred             hhhhhhhcce----EEEeecccceeeccchhhhhHHHHHHhcCcc-cceeEEecccHhhcccccCCCcccCCCCCCCChh
Confidence            8888886544    2333444566678888998888876442111 122332233321           11244456789


Q ss_pred             hHhHHHHHH
Q 042185          139 TASKAALHS  147 (162)
Q Consensus       139 ~~sKaa~~~  147 (162)
                      +++|-+--.
T Consensus       185 a~aKmy~~W  193 (376)
T KOG1372|consen  185 AAAKMYGYW  193 (376)
T ss_pred             HHhhhhheE
Confidence            999965433

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.36  E-value=0.004  Score=57.34  Aligned_cols=156  Identities=15%  Similarity=0.144  Sum_probs=95.1

Q ss_pred             CCchHHHHHHHHHHCCCeEEEEecChhhHHhhh-cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCCC
Q 042185            3 QGGIGHALARAFAASDCRVVATGRSKATMADLE-QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGP   81 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~   81 (162)
                      +++++.+++..|.++|+.|+++........... ....+..+.+.-.+..++..+++++....++++.+||..+..... 
T Consensus      1764 ~~~~~~~L~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~l~~~~~~~- 1842 (2582)
T TIGR02813      1764 DGHNAGVLAEKLIAAGWQVAVVRSPWVVSHSASPLASAIASVTLGTIDDTSIEAVIKDIEEKTAQIDGFIHLQPQHKSV- 1842 (2582)
T ss_pred             CcchHHHHHHHHHhCCCeEEEeeccccccccccccccccccccccccchHHHHHHHHhhhccccccceEEEeccccccc-
Confidence            567899999999999998887743221111100 012223344555566778888888888788999999988754220 


Q ss_pred             CCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchh--------hhHhHHHHHHHHHHHH
Q 042185           82 LAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGT--------YTASKAALHSLTDTLR  153 (162)
Q Consensus        82 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~--------y~~sKaa~~~l~~~l~  153 (162)
                      ....+...+...-...+...+.+.|.+.+.+...+.+.++.++...|-.+......        -...++++.+|+|+++
T Consensus      1843 ~~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~~~~~~~~~~~a~l~Gl~Ktl~ 1922 (2582)
T TIGR02813      1843 ADKVDAIELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSGTQQVKAELNQAALAGLTKTLN 1922 (2582)
T ss_pred             cccccccccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCccccccccccccchhhhhHHHHHHhHH
Confidence            00000001111111234445667777766665555678888888765554422211        1345789999999999


Q ss_pred             HHhccC
Q 042185          154 LELGHF  159 (162)
Q Consensus       154 ~e~~~~  159 (162)
                      .|+...
T Consensus      1923 ~E~P~~ 1928 (2582)
T TIGR02813      1923 HEWNAV 1928 (2582)
T ss_pred             HHCCCC
Confidence            999754

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.35  E-value=0.0011  Score=44.29  Aligned_cols=74  Identities=23%  Similarity=0.299  Sum_probs=53.4

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC------------CceeEEEeccCChHHHHHHHHH--HHHHcCCc
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------------PRFFVQELDVLSEQSVQNVLSN--VLEKFGKI   67 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~------------~~~~~~~~D~~~~~~i~~~~~~--~~~~~~~i   67 (162)
                      |.|-+|..+++.|+++|++|.+.+|++++.+++.+.            ....++-.=+.+.++++.++..  +.....+=
T Consensus         8 GlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i~~~l~~g   87 (163)
T PF03446_consen    8 GLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENILAGLRPG   87 (163)
T ss_dssp             --SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTHGGGS-TT
T ss_pred             chHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHHhhccccc
Confidence            457899999999999999999999998887776543            2345666667888889998888  66655455


Q ss_pred             cEEEECCC
Q 042185           68 DVLVNNAG   75 (162)
Q Consensus        68 d~vi~~ag   75 (162)
                      .++|.+.-
T Consensus        88 ~iiid~sT   95 (163)
T PF03446_consen   88 KIIIDMST   95 (163)
T ss_dssp             EEEEE-SS
T ss_pred             eEEEecCC
Confidence            56665554

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.33  E-value=0.00091  Score=49.74  Aligned_cols=107  Identities=19%  Similarity=0.173  Sum_probs=60.8

Q ss_pred             CCCCchHHHHHHHHHHCC-------CeEEEEecChhhHHhhhcCCceeEEEeccCChH-----HHHHHHHHHHHHcCCcc
Q 042185            1 CSQGGIGHALARAFAASD-------CRVVATGRSKATMADLEQDPRFFVQELDVLSEQ-----SVQNVLSNVLEKFGKID   68 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g-------~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-----~i~~~~~~~~~~~~~id   68 (162)
                      ||+|.+|.+++..|+..+       .+|+++|+++.. +.+..      ...|+.|..     ++. .-....+.+...|
T Consensus         9 GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~-~~~~g------~~~Dl~d~~~~~~~~~~-~~~~~~~~l~~aD   80 (325)
T cd01336           9 GAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPAL-KALEG------VVMELQDCAFPLLKSVV-ATTDPEEAFKDVD   80 (325)
T ss_pred             CCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCcc-ccccc------eeeehhhccccccCCce-ecCCHHHHhCCCC
Confidence            788999999999999854       489999996531 11111      122332210     000 0112223334789


Q ss_pred             EEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc--CCCeEEEecc
Q 042185           69 VLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR--KKGKIINVGS  125 (162)
Q Consensus        69 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~isS  125 (162)
                      +||++||.....   ..+.   ...++.|+.    +++.+.+.+.+.  .++.++++|.
T Consensus        81 iVI~tAG~~~~~---~~~R---~~l~~~N~~----i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          81 VAILVGAMPRKE---GMER---KDLLKANVK----IFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             EEEEeCCcCCCC---CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEecC
Confidence            999999974321   2232   445555555    556665556554  3566777775

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.32  E-value=0.0017  Score=48.22  Aligned_cols=136  Identities=19%  Similarity=0.125  Sum_probs=78.5

Q ss_pred             CCCCchHHHHHHHHHHCC--CeEEEEecChhhHH--hhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASD--CRVVATGRSKATMA--DLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g--~~vi~~~r~~~~~~--~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+.|.+|..++..|+.++  .+++++|++....+  ++.+ ....+...+.+++.+....       ...-|+||+++|.
T Consensus        15 GaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~-~~~~~~v~~~td~~~~~~~-------l~gaDvVVitaG~   86 (321)
T PTZ00325         15 GAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSH-IDTPAKVTGYADGELWEKA-------LRGADLVLICAGV   86 (321)
T ss_pred             CCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhh-cCcCceEEEecCCCchHHH-------hCCCCEEEECCCC
Confidence            667999999999999665  48999999422111  1111 1112233455554432222       2366999999997


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccc-------------ccCCCCCchhhhHhHH
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVT-------------VAAPGPWAGTYTASKA  143 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~-------------~~~~~~~~~~y~~sKa  143 (162)
                      ... +     .+.+...+..|+.....+.+.    |++.+..++|+++|..             ...+.|....|+.+  
T Consensus        87 ~~~-~-----~~tR~dll~~N~~i~~~i~~~----i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g--  154 (321)
T PTZ00325         87 PRK-P-----GMTRDDLFNTNAPIVRDLVAA----VASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVT--  154 (321)
T ss_pred             CCC-C-----CCCHHHHHHHHHHHHHHHHHH----HHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeech--
Confidence            422 1     133566778888766555544    5555556777777642             12334566678886  


Q ss_pred             HHHH--HHHHHHHHh
Q 042185          144 ALHS--LTDTLRLEL  156 (162)
Q Consensus       144 a~~~--l~~~l~~e~  156 (162)
                      .++.  |-..+++.+
T Consensus       155 ~LDs~R~r~~la~~l  169 (321)
T PTZ00325        155 TLDVVRARKFVAEAL  169 (321)
T ss_pred             hHHHHHHHHHHHHHh
Confidence            2553  334444443

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=97.29  E-value=0.0024  Score=49.37  Aligned_cols=116  Identities=12%  Similarity=0.198  Sum_probs=77.9

Q ss_pred             CCCCchHHHHHHHHHHC--CC-eEEEEecChh------hHHhh---------hcC-----CceeEEEeccCChHH-HHH-
Q 042185            1 CSQGGIGHALARAFAAS--DC-RVVATGRSKA------TMADL---------EQD-----PRFFVQELDVLSEQS-VQN-   55 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~--g~-~vi~~~r~~~------~~~~~---------~~~-----~~~~~~~~D~~~~~~-i~~-   55 (162)
                      ||+|++|+-++++|+..  .. ++.+.-|...      +++..         .+.     .++..+.+|+++++- +.. 
T Consensus        19 G~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~~LGis~~   98 (467)
T KOG1221|consen   19 GATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEPDLGISES   98 (467)
T ss_pred             cccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCcccCCChH
Confidence            89999999999999975  23 6777777421      22211         111     567888888877541 221 


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccccc
Q 042185           56 VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVA  129 (162)
Q Consensus        56 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  129 (162)
                      -.+.+   ...+|+|||+|+....       .+.++..+.+|..|+..+++.+.....   -..++.+|..-..
T Consensus        99 D~~~l---~~eV~ivih~AAtvrF-------de~l~~al~iNt~Gt~~~l~lak~~~~---l~~~vhVSTAy~n  159 (467)
T KOG1221|consen   99 DLRTL---ADEVNIVIHSAATVRF-------DEPLDVALGINTRGTRNVLQLAKEMVK---LKALVHVSTAYSN  159 (467)
T ss_pred             HHHHH---HhcCCEEEEeeeeecc-------chhhhhhhhhhhHhHHHHHHHHHHhhh---hheEEEeehhhee
Confidence            11112   2378999999997533       266788999999999999988766332   2478888876443

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.29  E-value=0.0092  Score=43.95  Aligned_cols=71  Identities=21%  Similarity=0.177  Sum_probs=49.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |+++++|.+++..+...|++|++++++.++.+.+.... .. ..+|..+.+..+.+.+...  ...+|++++++|
T Consensus       174 g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~--~~~~d~~i~~~g  244 (342)
T cd08266         174 GAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELG-AD-YVIDYRKEDFVREVRELTG--KRGVDVVVEHVG  244 (342)
T ss_pred             CCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcC-CC-eEEecCChHHHHHHHHHhC--CCCCcEEEECCc
Confidence            67889999999999999999999999887766553322 21 2246655555555444332  136999999987

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.25  E-value=0.0079  Score=47.37  Aligned_cols=75  Identities=19%  Similarity=0.162  Sum_probs=50.7

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCCh-------------HHHHHHHHHHHHHcCCcc
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSE-------------QSVQNVLSNVLEKFGKID   68 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~-------------~~i~~~~~~~~~~~~~id   68 (162)
                      |.|.+|...+..+...|+.|+++|+++++++.+.+ ....+...|..+.             +..+...+.+.+..+..|
T Consensus       172 GaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-lGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~~~~~~gaD  250 (509)
T PRK09424        172 GAGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-MGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMALFAEQAKEVD  250 (509)
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEEeccccccccccchhhhcchhHHHHHHHHHHhccCCCC
Confidence            57899999999999999999999999998887765 3344444444221             112222222233335799


Q ss_pred             EEEECCCCC
Q 042185           69 VLVNNAGVQ   77 (162)
Q Consensus        69 ~vi~~ag~~   77 (162)
                      ++|.++|..
T Consensus       251 VVIetag~p  259 (509)
T PRK09424        251 IIITTALIP  259 (509)
T ss_pred             EEEECCCCC
Confidence            999999974

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.21  E-value=0.00088  Score=44.14  Aligned_cols=67  Identities=19%  Similarity=0.279  Sum_probs=45.7

Q ss_pred             CCCchHHHHHHHHHHCC-CeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            2 SQGGIGHALARAFAASD-CRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g-~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      |.|++|.++++.|.+.| .+|.+++|+.++.++..++........+..+.++.          ....|++|++.+...
T Consensus        26 G~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~Dvvi~~~~~~~   93 (155)
T cd01065          26 GAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDLEEL----------LAEADLIINTTPVGM   93 (155)
T ss_pred             CCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecchhhc----------cccCCEEEeCcCCCC
Confidence            35899999999999996 68999999988777654432221122333333221          357899999997643

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=97.21  E-value=0.0056  Score=42.98  Aligned_cols=128  Identities=15%  Similarity=0.208  Sum_probs=79.6

Q ss_pred             CCCCchHHHHHHHHHHCCC---eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFAASDC---RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~---~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      |++|-+|++|.+.+.++|.   +.++....                .+|+++..+.++++...     ++.+||+.|+..
T Consensus         8 Gg~GLVGsAi~~vv~~q~~~~e~wvf~~sk----------------d~DLt~~a~t~~lF~~e-----kPthVIhlAAmV   66 (315)
T KOG1431|consen    8 GGTGLVGSAIVKVVQEQGFDDENWVFIGSK----------------DADLTNLADTRALFESE-----KPTHVIHLAAMV   66 (315)
T ss_pred             cCCchHHHHHHHHHHhcCCCCcceEEeccc----------------cccccchHHHHHHHhcc-----CCceeeehHhhh
Confidence            7888999999999998874   33333332                27999999999999887     888999988753


Q ss_pred             CCCCCC--CCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccccc----------------CCCCCchhhh
Q 042185           78 CVGPLA--EVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVA----------------APGPWAGTYT  139 (162)
Q Consensus        78 ~~~~~~--~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~----------------~~~~~~~~y~  139 (162)
                      .- -+.  .-..+-|...+++|-    ++++.+.+.    +-.+++...|..-+                .|.|...-|+
T Consensus        67 GG-lf~N~~ynldF~r~Nl~ind----NVlhsa~e~----gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYs  137 (315)
T KOG1431|consen   67 GG-LFHNNTYNLDFIRKNLQIND----NVLHSAHEH----GVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYS  137 (315)
T ss_pred             cc-hhhcCCCchHHHhhcceech----hHHHHHHHh----chhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHH
Confidence            21 121  223445555544442    233443332    11233433332211                1223455699


Q ss_pred             HhHHHHHHHHHHHHHHhcc
Q 042185          140 ASKAALHSLTDTLRLELGH  158 (162)
Q Consensus       140 ~sKaa~~~l~~~l~~e~~~  158 (162)
                      -+|..++-..+.++.+.+.
T Consensus       138 yAKr~idv~n~aY~~qhg~  156 (315)
T KOG1431|consen  138 YAKRMIDVQNQAYRQQHGR  156 (315)
T ss_pred             HHHHHHHHHHHHHHHHhCC
Confidence            9998888778888888765

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=97.21  E-value=0.012  Score=46.28  Aligned_cols=74  Identities=16%  Similarity=0.126  Sum_probs=53.3

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCC-------------hHHHHHHHHHHHHHcCCcc
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLS-------------EQSVQNVLSNVLEKFGKID   68 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~-------------~~~i~~~~~~~~~~~~~id   68 (162)
                      |.|.+|...+..+...|+.|++.+++.++++.++. ....++..|...             .+..+...+.+.++....|
T Consensus       171 GaG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~~e~~~~~D  249 (511)
T TIGR00561       171 GAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELFAAQAKEVD  249 (511)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeccccccccccccceeecCHHHHHHHHHHHHHHhCCCC
Confidence            46899999999999999999999999988776654 445555555421             2334444455555567899


Q ss_pred             EEEECCCC
Q 042185           69 VLVNNAGV   76 (162)
Q Consensus        69 ~vi~~ag~   76 (162)
                      ++|+++-+
T Consensus       250 IVI~Tali  257 (511)
T TIGR00561       250 IIITTALI  257 (511)
T ss_pred             EEEECccc
Confidence            99999944

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.17  E-value=0.0033  Score=46.76  Aligned_cols=108  Identities=16%  Similarity=0.095  Sum_probs=65.4

Q ss_pred             CCCCchHHHHHHHHHHCCC-------eEEEEecChhhHHhhhcCCceeEEEeccCChHHHH--HHH--HHHHHHcCCccE
Q 042185            1 CSQGGIGHALARAFAASDC-------RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQ--NVL--SNVLEKFGKIDV   69 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-------~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~--~~~--~~~~~~~~~id~   69 (162)
                      |++|.+|..++..|+.++.       .++++|++++.-       .......|+.+.....  ...  ....+.+..-|+
T Consensus         6 GaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-------~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~aDi   78 (324)
T TIGR01758         6 GAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-------VLEGVVMELMDCAFPLLDGVVPTHDPAVAFTDVDV   78 (324)
T ss_pred             CCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-------ccceeEeehhcccchhcCceeccCChHHHhCCCCE
Confidence            6779999999999998654       499999965421       1233345555544111  000  022344457899


Q ss_pred             EEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc--CCCeEEEecc
Q 042185           70 LVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR--KKGKIINVGS  125 (162)
Q Consensus        70 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~isS  125 (162)
                      ||++||....      ..+.+...+..|+.    +++.+.+.+.+.  +.+.++++|-
T Consensus        79 VVitAG~~~~------~~~tr~~ll~~N~~----i~k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        79 AILVGAFPRK------EGMERRDLLSKNVK----IFKEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             EEEcCCCCCC------CCCcHHHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEeCC
Confidence            9999997422      11235566666665    556666666654  3566776664

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.16  E-value=0.0011  Score=48.70  Aligned_cols=70  Identities=19%  Similarity=0.185  Sum_probs=53.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      ||+|.-|.-+|++|+.+|.+..+.+||.+++..+.......+-..++-+++.++.+..       ..++|+||+|..
T Consensus        13 GAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~-------~~~VVlncvGPy   82 (382)
T COG3268          13 GATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMAS-------RTQVVLNCVGPY   82 (382)
T ss_pred             ccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHh-------cceEEEeccccc
Confidence            8999999999999999999999999999999887665444433344444554444433       559999999964

>cd00704 MDH Malate dehydrogenase

Probab=97.08  E-value=0.0043  Score=46.17  Aligned_cols=108  Identities=14%  Similarity=0.096  Sum_probs=63.7

Q ss_pred             CCCCchHHHHHHHHHHCCC-------eEEEEecChhhHHhhhcCCceeEEEeccCChHHHH----HHHHHHHHHcCCccE
Q 042185            1 CSQGGIGHALARAFAASDC-------RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQ----NVLSNVLEKFGKIDV   69 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-------~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~----~~~~~~~~~~~~id~   69 (162)
                      ||+|.+|..++..|+.+|.       .+++.|+++..       ........|+.+.....    .+-....+.+..-|+
T Consensus         7 GAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~-------~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~aDi   79 (323)
T cd00704           7 GAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM-------KALEGVVMELQDCAFPLLKGVVITTDPEEAFKDVDV   79 (323)
T ss_pred             CCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc-------CccceeeeehhhhcccccCCcEEecChHHHhCCCCE
Confidence            7789999999999998763       49999998621       11233344554432000    011223344557899


Q ss_pred             EEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc--CCCeEEEecc
Q 042185           70 LVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR--KKGKIINVGS  125 (162)
Q Consensus        70 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~isS  125 (162)
                      ||+.||.... +  ..+.   ...+..|..    +++.+.+.+.+.  +.+.++++|-
T Consensus        80 VVitAG~~~~-~--g~tR---~dll~~N~~----i~~~i~~~i~~~~~~~~iiivvsN  127 (323)
T cd00704          80 AILVGAFPRK-P--GMER---ADLLRKNAK----IFKEQGEALNKVAKPTVKVLVVGN  127 (323)
T ss_pred             EEEeCCCCCC-c--CCcH---HHHHHHhHH----HHHHHHHHHHHhCCCCeEEEEeCC
Confidence            9999997422 1  2333   334444544    566666666655  3566666653

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.06  E-value=0.0024  Score=49.53  Aligned_cols=63  Identities=19%  Similarity=0.214  Sum_probs=44.7

Q ss_pred             CCchHHHHHHHHHHCCCeEEEEecCh-hhHHhhh---cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            3 QGGIGHALARAFAASDCRVVATGRSK-ATMADLE---QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~~vi~~~r~~-~~~~~~~---~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      .|++|.++|+.|+++|++|++.+++. +.+++..   ....+.++..|..+            +..+.+|.||+++|..
T Consensus        13 ~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~------------~~~~~~d~vv~~~g~~   79 (450)
T PRK14106         13 AGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE------------EFLEGVDLVVVSPGVP   79 (450)
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch------------hHhhcCCEEEECCCCC
Confidence            44599999999999999999999975 3232211   12345677777765            1235789999999974

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=97.05  E-value=0.0072  Score=38.43  Aligned_cols=66  Identities=21%  Similarity=0.289  Sum_probs=47.3

Q ss_pred             chHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcC--CccEEEECCCC
Q 042185            5 GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFG--KIDVLVNNAGV   76 (162)
Q Consensus         5 giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--~id~vi~~ag~   76 (162)
                      |||...+..+...|++|+++++++++.+.+++-. ...+ +|-.+.+    +.+++.+..+  .+|++|.|+|.
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~G-a~~~-~~~~~~~----~~~~i~~~~~~~~~d~vid~~g~   68 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKELG-ADHV-IDYSDDD----FVEQIRELTGGRGVDVVIDCVGS   68 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTT-ESEE-EETTTSS----HHHHHHHHTTTSSEEEEEESSSS
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHhhc-cccc-ccccccc----cccccccccccccceEEEEecCc
Confidence            5888888888889999999999999888877654 2222 3444443    3444444333  69999999984

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=96.94  E-value=0.0038  Score=42.66  Aligned_cols=70  Identities=20%  Similarity=0.293  Sum_probs=40.6

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      +||-+|.++|+++..+|++|+++..... +.   ....+  -..++.+.+++...+.+.   +..-|++|++|++....
T Consensus        27 SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~---~p~~~--~~i~v~sa~em~~~~~~~---~~~~Di~I~aAAVsDf~   96 (185)
T PF04127_consen   27 SSGKMGAALAEEAARRGAEVTLIHGPSS-LP---PPPGV--KVIRVESAEEMLEAVKEL---LPSADIIIMAAAVSDFR   96 (185)
T ss_dssp             --SHHHHHHHHHHHHTT-EEEEEE-TTS--------TTE--EEEE-SSHHHHHHHHHHH---GGGGSEEEE-SB--SEE
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEEecCcc-cc---ccccc--eEEEecchhhhhhhhccc---cCcceeEEEecchhhee
Confidence            5789999999999999999998887632 11   11233  334455555554444444   44559999999986543

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.93  E-value=0.018  Score=42.21  Aligned_cols=61  Identities=28%  Similarity=0.426  Sum_probs=41.3

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |.|++|+++++.|...|++|++.+|+.+..+...... ...+     ..+++.       +.....|++|++..
T Consensus       158 G~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g-~~~~-----~~~~l~-------~~l~~aDiVint~P  218 (287)
T TIGR02853       158 GFGRTGMTIARTFSALGARVFVGARSSADLARITEMG-LIPF-----PLNKLE-------EKVAEIDIVINTIP  218 (287)
T ss_pred             cChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCC-Ceee-----cHHHHH-------HHhccCCEEEECCC
Confidence            4688999999999999999999999987665543211 1111     112222       22346799999874

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK05086 malate dehydrogenase; Provisional

Probab=96.91  E-value=0.0026  Score=47.05  Aligned_cols=106  Identities=22%  Similarity=0.181  Sum_probs=55.5

Q ss_pred             CCCCchHHHHHHHHHH-C--CCeEEEEecChhhHH---hhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAA-S--DCRVVATGRSKATMA---DLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~-~--g~~vi~~~r~~~~~~---~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+|++|.+++..|.. .  +..+++.++++....   ++........+..  .+.+++       .+.....|+||.++
T Consensus         7 GAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~~~d~-------~~~l~~~DiVIita   77 (312)
T PRK05086          7 GAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDP-------TPALEGADVVLISA   77 (312)
T ss_pred             CCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEE--eCCCCH-------HHHcCCCCEEEEcC
Confidence            7889999999998855 2  447888898743210   1111010111111  111111       22224689999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecc
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGS  125 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS  125 (162)
                      |.....   ..+   -...+..|....    +.+.+.|.+.....+|.+.|
T Consensus        78 G~~~~~---~~~---R~dll~~N~~i~----~~ii~~i~~~~~~~ivivvs  118 (312)
T PRK05086         78 GVARKP---GMD---RSDLFNVNAGIV----KNLVEKVAKTCPKACIGIIT  118 (312)
T ss_pred             CCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHHHhCCCeEEEEcc
Confidence            974321   122   234455565544    44455555544445555554

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.83  E-value=0.0084  Score=43.45  Aligned_cols=65  Identities=18%  Similarity=0.390  Sum_probs=43.5

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCce--eEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRF--FVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~--~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      |+||+|++++..|++.|++|.+++|+.++.+++.+....  .....+.   ++         ......|+||++.+...
T Consensus       124 GaGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~---~~---------~~~~~~DivInatp~gm  190 (270)
T TIGR00507       124 GAGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSM---DE---------LPLHRVDLIINATSAGM  190 (270)
T ss_pred             cCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEech---hh---------hcccCccEEEECCCCCC
Confidence            347999999999999999999999998877665443110  0111111   11         01246899999998753

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.83  E-value=0.0039  Score=48.34  Aligned_cols=54  Identities=13%  Similarity=0.162  Sum_probs=42.9

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHH
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQN   55 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~   55 (162)
                      |.|.+|.++++.|.++|+.|++++++++..+.+.+...+.++.+|.++.+.++.
T Consensus         7 G~G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~   60 (453)
T PRK09496          7 GAGQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLRE   60 (453)
T ss_pred             CCCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHH
Confidence            458999999999999999999999999888776554556777778777554433

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.81  E-value=0.0026  Score=46.39  Aligned_cols=70  Identities=16%  Similarity=0.115  Sum_probs=45.9

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      |+||.+++++..|++.|+ +|.++.|+.++.+++.+..........+...+++       .+.....|+|||+.....
T Consensus       132 GaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~-------~~~~~~~DiVInaTp~g~  202 (282)
T TIGR01809       132 GAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGG-------LAIEKAAEVLVSTVPADV  202 (282)
T ss_pred             cCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhh-------hhcccCCCEEEECCCCCC
Confidence            579999999999999998 7999999998888776532111000111111111       122246899999998743

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.80  E-value=0.013  Score=43.63  Aligned_cols=138  Identities=14%  Similarity=0.081  Sum_probs=82.1

Q ss_pred             CCCCchHHHHHHHHHHCCC-------eEEEEecChhh--HHhhhcC---Cc-eeEEEeccCChHHHHHHHHHHHHHcCCc
Q 042185            1 CSQGGIGHALARAFAASDC-------RVVATGRSKAT--MADLEQD---PR-FFVQELDVLSEQSVQNVLSNVLEKFGKI   67 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-------~vi~~~r~~~~--~~~~~~~---~~-~~~~~~D~~~~~~i~~~~~~~~~~~~~i   67 (162)
                      |++|.+|..++..|+.+|.       ++++.|.+++.  ++...-+   .. ...-.+.++.         .-.+.+-.-
T Consensus         9 Ga~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~---------~~~~~~~da   79 (322)
T cd01338           9 GAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITD---------DPNVAFKDA   79 (322)
T ss_pred             CCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEec---------CcHHHhCCC
Confidence            6679999999999998875       69999985432  2211100   00 0000011111         112233467


Q ss_pred             cEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC--CCeEEEeccccc--------cC-CCCCch
Q 042185           68 DVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK--KGKIINVGSVTV--------AA-PGPWAG  136 (162)
Q Consensus        68 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~isS~~~--------~~-~~~~~~  136 (162)
                      |++|.+||.... +  .++.   ...+..|+.    +++.+.+.+.+..  .+.++++|-...        .. ..|...
T Consensus        80 DivvitaG~~~k-~--g~tR---~dll~~N~~----i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~~p~~~  149 (322)
T cd01338          80 DWALLVGAKPRG-P--GMER---ADLLKANGK----IFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPDIPPDN  149 (322)
T ss_pred             CEEEEeCCCCCC-C--CCcH---HHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCCCChHh
Confidence            999999997422 2  2333   233455544    5666666665543  567777764321        13 266777


Q ss_pred             hhhHhHHHHHHHHHHHHHHhc
Q 042185          137 TYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus       137 ~y~~sKaa~~~l~~~l~~e~~  157 (162)
                      .|++++.--..|...+++.++
T Consensus       150 ViG~t~LDs~Rl~~~la~~lg  170 (322)
T cd01338         150 FTAMTRLDHNRAKSQLAKKAG  170 (322)
T ss_pred             eEEehHHHHHHHHHHHHHHhC
Confidence            899999888888888888765

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.80  E-value=0.007  Score=38.77  Aligned_cols=77  Identities=22%  Similarity=0.267  Sum_probs=48.7

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEE-ecChhhHHhhhcC-------------CceeEEEeccCChHHHHHHHHHHHHH--cC
Q 042185            2 SQGGIGHALARAFAASDCRVVAT-GRSKATMADLEQD-------------PRFFVQELDVLSEQSVQNVLSNVLEK--FG   65 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~-~r~~~~~~~~~~~-------------~~~~~~~~D~~~~~~i~~~~~~~~~~--~~   65 (162)
                      |.|-+|.++++.|.+.|++|..+ +|+.+..+++...             .....+-+-+.|. .+..+.+++...  +.
T Consensus        17 GaGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va~~La~~~~~~   95 (127)
T PF10727_consen   17 GAGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVAEQLAQYGAWR   95 (127)
T ss_dssp             CTSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHHHHHHCC--S-
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHHHHHHHhccCC
Confidence            46889999999999999998766 5665555544331             2344444555554 799999999765  33


Q ss_pred             CccEEEECCCCCCC
Q 042185           66 KIDVLVNNAGVQCV   79 (162)
Q Consensus        66 ~id~vi~~ag~~~~   79 (162)
                      +=.+|+|+.|-...
T Consensus        96 ~g~iVvHtSGa~~~  109 (127)
T PF10727_consen   96 PGQIVVHTSGALGS  109 (127)
T ss_dssp             TT-EEEES-SS--G
T ss_pred             CCcEEEECCCCChH
Confidence            44689999997543

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK14982 acyl-ACP reductase; Provisional

Probab=96.80  E-value=0.0042  Score=46.43  Aligned_cols=63  Identities=22%  Similarity=0.345  Sum_probs=45.0

Q ss_pred             CCCCchHHHHHHHHHHC-CC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFAAS-DC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~-g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      ||+|.||..+|++|+++ |. ++++++|+.+++..+..+..    ..|+.   +       +.+.+...|+||++++..
T Consensus       162 GAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~----~~~i~---~-------l~~~l~~aDiVv~~ts~~  226 (340)
T PRK14982        162 GATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG----GGKIL---S-------LEEALPEADIVVWVASMP  226 (340)
T ss_pred             ccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc----cccHH---h-------HHHHHccCCEEEECCcCC
Confidence            78999999999999865 64 89999999888777654321    12221   1       223345789999999864

>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]

Probab=96.79  E-value=0.0068  Score=44.42  Aligned_cols=62  Identities=21%  Similarity=0.243  Sum_probs=47.3

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEE
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLV   71 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi   71 (162)
                      |||.+|++++.++-+-|..|+.+||=.....-   ......+-+|+.|.++++.+++.-     ++|.+|
T Consensus        19 GSGELGKEvaIe~QRLG~eViAVDrY~~APAm---qVAhrs~Vi~MlD~~al~avv~re-----kPd~IV   80 (394)
T COG0027          19 GSGELGKEVAIEAQRLGVEVIAVDRYANAPAM---QVAHRSYVIDMLDGDALRAVVERE-----KPDYIV   80 (394)
T ss_pred             cCCccchHHHHHHHhcCCEEEEecCcCCChhh---hhhhheeeeeccCHHHHHHHHHhh-----CCCeee
Confidence            68999999999999999999999994321110   122345567999999999998876     677765

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.77  E-value=0.039  Score=39.21  Aligned_cols=70  Identities=23%  Similarity=0.246  Sum_probs=45.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+++ +|.+++..+...|.+|+.+++++++.+.+.......  .+|..+.+..+.+.   ....+.+|+++++++.
T Consensus       142 g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~---~~~~~~~d~vi~~~~~  211 (271)
T cd05188         142 GAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKELGADH--VIDYKEEDLEEELR---LTGGGGADVVIDAVGG  211 (271)
T ss_pred             CCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCce--eccCCcCCHHHHHH---HhcCCCCCEEEECCCC
Confidence            5555 999999988889999999999887766654322111  23433333333333   2233579999999874

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=96.74  E-value=0.0012  Score=46.52  Aligned_cols=139  Identities=21%  Similarity=0.235  Sum_probs=88.7

Q ss_pred             CCCCchHHHHHHHHHHC-CC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAAS-DC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~-g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      |+-|-+|..+|+.|-.+ |. +|++.|-..+...-.   ..--++-.|+-|...+++++-.-     +||-+||-.+...
T Consensus        51 G~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~---~~GPyIy~DILD~K~L~eIVVn~-----RIdWL~HfSALLS  122 (366)
T KOG2774|consen   51 GSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVT---DVGPYIYLDILDQKSLEEIVVNK-----RIDWLVHFSALLS  122 (366)
T ss_pred             cchHHHhHHHHHHHHHHhCCccEehhhccCCchhhc---ccCCchhhhhhccccHHHhhccc-----ccceeeeHHHHHH
Confidence            66778899999999765 76 688777654432211   12234556888888888876654     8999998765421


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCC------------CchhhhHhHHHHH
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGP------------WAGTYTASKAALH  146 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------~~~~y~~sKaa~~  146 (162)
                           -+.+.+.--..++|+.|..++++...++     +-++-+-|...++.|..            +...|+.||.-.+
T Consensus       123 -----AvGE~NVpLA~~VNI~GvHNil~vAa~~-----kL~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAE  192 (366)
T KOG2774|consen  123 -----AVGETNVPLALQVNIRGVHNILQVAAKH-----KLKVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAE  192 (366)
T ss_pred             -----HhcccCCceeeeecchhhhHHHHHHHHc-----CeeEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHH
Confidence                 1122233345678999998888876443     23444445555554422            2346999998888


Q ss_pred             HHHHHHHHHhc
Q 042185          147 SLTDTLRLELG  157 (162)
Q Consensus       147 ~l~~~l~~e~~  157 (162)
                      .+-+.+...++
T Consensus       193 L~GEy~~hrFg  203 (366)
T KOG2774|consen  193 LLGEYFNHRFG  203 (366)
T ss_pred             HHHHHHHhhcC
Confidence            88777665554

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.73  E-value=0.0097  Score=35.83  Aligned_cols=38  Identities=34%  Similarity=0.490  Sum_probs=32.3

Q ss_pred             CCCchHHHHHHHHHHCC---CeEEEE-ecChhhHHhhhcCCc
Q 042185            2 SQGGIGHALARAFAASD---CRVVAT-GRSKATMADLEQDPR   39 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g---~~vi~~-~r~~~~~~~~~~~~~   39 (162)
                      |+|.+|.++++.|.+.|   .+|.++ +|++++.++...+..
T Consensus         6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~   47 (96)
T PF03807_consen    6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYG   47 (96)
T ss_dssp             STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCT
T ss_pred             CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhc
Confidence            57899999999999999   899855 999998888765544

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.69  E-value=0.0074  Score=43.40  Aligned_cols=69  Identities=16%  Similarity=0.176  Sum_probs=49.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||++. |+.+++.|.++|++|+...++....+.+.... ...+..+.-+.+++..++.+.     .+|.||..+..
T Consensus         7 GGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g-~~~v~~g~l~~~~l~~~l~~~-----~i~~VIDAtHP   75 (256)
T TIGR00715         7 GGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQ-ALTVHTGALDPQELREFLKRH-----SIDILVDATHP   75 (256)
T ss_pred             echHH-HHHHHHHHHhCCCeEEEEEccCCccccccccC-CceEEECCCCHHHHHHHHHhc-----CCCEEEEcCCH
Confidence            56666 99999999999999999998876554443322 334446666767766666554     88999988853

This enzyme was found to be a monomer by gel filtration.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.65  E-value=0.0055  Score=44.62  Aligned_cols=67  Identities=12%  Similarity=0.220  Sum_probs=44.8

Q ss_pred             CCCchHHHHHHHHHHCC-CeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            2 SQGGIGHALARAFAASD-CRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g-~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      |+||+|++++..|...| .+|++++|+.++.+++.++..... .+++ +.        +..+.....|+||++.....
T Consensus       130 GaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~~-~~--------~~~~~~~~~DivInaTp~g~  197 (278)
T PRK00258        130 GAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAEL-DL--------ELQEELADFDLIINATSAGM  197 (278)
T ss_pred             cCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-ceee-cc--------cchhccccCCEEEECCcCCC
Confidence            46899999999999999 589999999988777655322110 0111 00        01122246799999997653

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=96.58  E-value=0.0069  Score=48.40  Aligned_cols=67  Identities=15%  Similarity=0.138  Sum_probs=52.6

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |.|.+|+.+++.|.++|.+|+++++|+++.+++.+ .....+.+|.+|++.++++-      ..+.|.++.+.+
T Consensus       424 G~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~-~g~~~i~GD~~~~~~L~~a~------i~~a~~viv~~~  490 (558)
T PRK10669        424 GYGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE-RGIRAVLGNAANEEIMQLAH------LDCARWLLLTIP  490 (558)
T ss_pred             CCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-CCCeEEEcCCCCHHHHHhcC------ccccCEEEEEcC
Confidence            57889999999999999999999999998888864 56888899999987665531      124566665544

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.58  E-value=0.002  Score=47.07  Aligned_cols=35  Identities=29%  Similarity=0.358  Sum_probs=31.0

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhc
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQ   36 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~   36 (162)
                      |+||.|++++..|+..|+ +|.+++|+.++.+.+.+
T Consensus       134 GaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~  169 (284)
T PRK12549        134 GAGGAGAAVAHALLTLGVERLTIFDVDPARAAALAD  169 (284)
T ss_pred             CCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence            578999999999999998 79999999888777654

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.54  E-value=0.013  Score=43.65  Aligned_cols=72  Identities=19%  Similarity=0.346  Sum_probs=46.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |++|++|..++......|++|+.+.++.++.+.+.+......+ +|..+.++....+.+...  +.+|.++.+.|
T Consensus       159 Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~i~~~~~--~gvd~v~d~~g  230 (338)
T cd08295         159 AASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDA-FNYKEEPDLDAALKRYFP--NGIDIYFDNVG  230 (338)
T ss_pred             cCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCcee-EEcCCcccHHHHHHHhCC--CCcEEEEECCC
Confidence            6789999999887778899999999988877766542222211 232222233333333321  46899998876

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.53  E-value=0.011  Score=45.51  Aligned_cols=63  Identities=16%  Similarity=0.186  Sum_probs=44.4

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCc-eeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPR-FFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+||+|+.+++.|+++|+ +++++.|+.++.+.+.++.. ..     +...+++       .+....-|+||++.+.
T Consensus       188 GaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~-----~~~~~~l-------~~~l~~aDiVI~aT~a  252 (414)
T PRK13940        188 GAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNAS-----AHYLSEL-------PQLIKKADIIIAAVNV  252 (414)
T ss_pred             cCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCe-----EecHHHH-------HHHhccCCEEEECcCC
Confidence            579999999999999997 79999999888777765432 11     1112222       2333456889888875

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.43  E-value=0.024  Score=41.73  Aligned_cols=67  Identities=27%  Similarity=0.351  Sum_probs=45.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+++++|.++++.+...|.+|+.+.++.++.+.+.......++  |.   +++.   +.+ .+...+|++++++|.
T Consensus       170 ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~---~~~-~~~~~~d~v~~~~g~  236 (332)
T cd08259         170 GAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVI--DG---SKFS---EDV-KKLGGADVVIELVGS  236 (332)
T ss_pred             CCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEE--ec---HHHH---HHH-HhccCCCEEEECCCh
Confidence            7889999999999999999999999887776665332221111  22   1222   222 223479999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.40  E-value=0.017  Score=43.29  Aligned_cols=27  Identities=22%  Similarity=0.367  Sum_probs=24.5

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecCh
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSK   28 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~   28 (162)
                      |.||+|.++++.|+..|. ++.++|++.
T Consensus        31 G~GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         31 GAGALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            578999999999999998 899999873

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.35  E-value=0.0072  Score=44.04  Aligned_cols=68  Identities=21%  Similarity=0.317  Sum_probs=47.0

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeE---EEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFV---QELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~---~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      |+||-+++++..|++.|+ +|+++.|+.++.+++.+...-..   ...+..+.+..+           ..|++||+....
T Consensus       133 GAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~-----------~~dliINaTp~G  201 (283)
T COG0169         133 GAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE-----------EADLLINATPVG  201 (283)
T ss_pred             CCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc-----------ccCEEEECCCCC
Confidence            578999999999999996 89999999998888765322111   122222222111           569999999875


Q ss_pred             CCC
Q 042185           78 CVG   80 (162)
Q Consensus        78 ~~~   80 (162)
                      ...
T Consensus       202 m~~  204 (283)
T COG0169         202 MAG  204 (283)
T ss_pred             CCC
Confidence            443

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.32  E-value=0.045  Score=35.58  Aligned_cols=27  Identities=22%  Similarity=0.390  Sum_probs=24.2

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecCh
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSK   28 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~   28 (162)
                      |.||+|.++++.|+..|. ++.++|.+.
T Consensus         6 G~GglGs~ia~~L~~~Gv~~i~ivD~d~   33 (143)
T cd01483           6 GLGGLGSEIALNLARSGVGKITLIDFDT   33 (143)
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEEcCCC
Confidence            578999999999999998 799998863

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=96.28  E-value=0.11  Score=38.39  Aligned_cols=103  Identities=14%  Similarity=0.173  Sum_probs=60.0

Q ss_pred             CCCchHHHHHHHHHHCC--CeEEEEecChhhHHhhhcCC----c--eeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            2 SQGGIGHALARAFAASD--CRVVATGRSKATMADLEQDP----R--FFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g--~~vi~~~r~~~~~~~~~~~~----~--~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      |+|++|.+++..|+.+|  .+|++++++.+..+....+.    .  ......-..+.+       .    ...-|++|++
T Consensus         7 GaG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~-------~----l~~aDIVIit   75 (306)
T cd05291           7 GAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYS-------D----CKDADIVVIT   75 (306)
T ss_pred             CCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHH-------H----hCCCCEEEEc
Confidence            46899999999999998  47999999987665443321    0  000011112221       1    2467999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-CCCeEEEecc
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKIINVGS  125 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS  125 (162)
                      +|.... +  .++..   ..++.|..    +++...+.+.+. ..+.++++|-
T Consensus        76 ag~~~~-~--g~~R~---dll~~N~~----i~~~~~~~i~~~~~~~~vivvsN  118 (306)
T cd05291          76 AGAPQK-P--GETRL---DLLEKNAK----IMKSIVPKIKASGFDGIFLVASN  118 (306)
T ss_pred             cCCCCC-C--CCCHH---HHHHHHHH----HHHHHHHHHHHhCCCeEEEEecC
Confidence            997422 1  23332   33444444    445555555443 3567777764

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.25  E-value=0.3  Score=35.98  Aligned_cols=61  Identities=26%  Similarity=0.350  Sum_probs=41.6

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |.|++|+.++..|...|++|++.+|+.+..+..... ...+.  +   .+       ++.+.....|+||++++
T Consensus       159 G~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~-G~~~~--~---~~-------~l~~~l~~aDiVI~t~p  219 (296)
T PRK08306        159 GFGRTGMTLARTLKALGANVTVGARKSAHLARITEM-GLSPF--H---LS-------ELAEEVGKIDIIFNTIP  219 (296)
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc-CCeee--c---HH-------HHHHHhCCCCEEEECCC
Confidence            457899999999999999999999998765554332 22222  1   11       22233346899999864

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.22  E-value=0.015  Score=49.45  Aligned_cols=68  Identities=16%  Similarity=0.175  Sum_probs=53.8

Q ss_pred             CCCchHHHHHHHHHHCC-Ce-------------EEEEecChhhHHhhhcCC-ceeEEEeccCChHHHHHHHHHHHHHcCC
Q 042185            2 SQGGIGHALARAFAASD-CR-------------VVATGRSKATMADLEQDP-RFFVQELDVLSEQSVQNVLSNVLEKFGK   66 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g-~~-------------vi~~~r~~~~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~~~   66 (162)
                      |+|.+|+..++.|++.. +.             |+++|++.+..+++.+.. .+..+.+|++|.+++.++++       .
T Consensus       576 GAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~-------~  648 (1042)
T PLN02819        576 GAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVS-------Q  648 (1042)
T ss_pred             CCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhc-------C
Confidence            46899999999998763 34             888999988888776654 67789999999877666544       3


Q ss_pred             ccEEEECCCC
Q 042185           67 IDVLVNNAGV   76 (162)
Q Consensus        67 id~vi~~ag~   76 (162)
                      +|+||++...
T Consensus       649 ~DaVIsalP~  658 (1042)
T PLN02819        649 VDVVISLLPA  658 (1042)
T ss_pred             CCEEEECCCc
Confidence            6999999875

>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase

Probab=96.22  E-value=0.044  Score=40.07  Aligned_cols=75  Identities=15%  Similarity=0.110  Sum_probs=48.2

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC------------CceeEEEeccCChHHHHHHH---HHHHHHcCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------------PRFFVQELDVLSEQSVQNVL---SNVLEKFGK   66 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~------------~~~~~~~~D~~~~~~i~~~~---~~~~~~~~~   66 (162)
                      |.|-+|.++++.|++.|++|++.+|+.++.+.+.+.            ....++-+=+.+.++++.++   +.+.....+
T Consensus         3 GlG~mG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~~~~~~advVil~vp~~~~~~~v~~g~~~l~~~~~~   82 (288)
T TIGR01692         3 GLGNMGGPMAANLLKAGHPVRVFDLFPDAVEEAVAAGAQAAASPAEAAEGADRVITMLPAGQHVISVYSGDEGILPKVAK   82 (288)
T ss_pred             cccHhHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCcchHhhcCCC
Confidence            567899999999999999999999998776655331            12233333344455666666   455443333


Q ss_pred             ccEEEECCCC
Q 042185           67 IDVLVNNAGV   76 (162)
Q Consensus        67 id~vi~~ag~   76 (162)
                      =.++|.+..+
T Consensus        83 g~~vid~st~   92 (288)
T TIGR01692        83 GSLLIDCSTI   92 (288)
T ss_pred             CCEEEECCCC
Confidence            3456666544

This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.22  E-value=0.019  Score=39.78  Aligned_cols=36  Identities=14%  Similarity=0.260  Sum_probs=30.9

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD   37 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~   37 (162)
                      |.|.+|..+++.|.+.|++|++.+++.+..++..++
T Consensus        35 G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          35 GLGKVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            457899999999999999999999998877776554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=96.21  E-value=0.15  Score=33.27  Aligned_cols=102  Identities=16%  Similarity=0.130  Sum_probs=59.4

Q ss_pred             CCCCchHHHHHHHHHHCCC--eEEEEecChhhHHhhhc-------CCcee-EEEeccCChHHHHHHHHHHHHHcCCccEE
Q 042185            1 CSQGGIGHALARAFAASDC--RVVATGRSKATMADLEQ-------DPRFF-VQELDVLSEQSVQNVLSNVLEKFGKIDVL   70 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~--~vi~~~r~~~~~~~~~~-------~~~~~-~~~~D~~~~~~i~~~~~~~~~~~~~id~v   70 (162)
                      |++|.+|.+++..|...+.  ++++.|++++..+....       ..... .+..  .+++           ....-|++
T Consensus         7 Ga~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~--~~~~-----------~~~~aDiv   73 (141)
T PF00056_consen    7 GAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS--GDYE-----------ALKDADIV   73 (141)
T ss_dssp             STTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE--SSGG-----------GGTTESEE
T ss_pred             CCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc--cccc-----------ccccccEE
Confidence            6789999999999998874  79999999765443221       12111 1111  2322           22367999


Q ss_pred             EECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhh-cCCCeEEEecc
Q 042185           71 VNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY-RKKGKIINVGS  125 (162)
Q Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~isS  125 (162)
                      |.++|....   ...+.   ...+..|..    +++.+.+.+.+ ...+.++++|-
T Consensus        74 vitag~~~~---~g~sR---~~ll~~N~~----i~~~~~~~i~~~~p~~~vivvtN  119 (141)
T PF00056_consen   74 VITAGVPRK---PGMSR---LDLLEANAK----IVKEIAKKIAKYAPDAIVIVVTN  119 (141)
T ss_dssp             EETTSTSSS---TTSSH---HHHHHHHHH----HHHHHHHHHHHHSTTSEEEE-SS
T ss_pred             EEecccccc---ccccH---HHHHHHhHh----HHHHHHHHHHHhCCccEEEEeCC
Confidence            999997422   12232   334455554    44444444443 34567777664

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.20  E-value=0.03  Score=37.94  Aligned_cols=31  Identities=35%  Similarity=0.437  Sum_probs=26.6

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHH
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMA   32 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~   32 (162)
                      |.|.||+++++.+..-|++|+..+|......
T Consensus        43 G~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   43 GYGRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             STSHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             EEcCCcCeEeeeeecCCceeEEecccCChhh
Confidence            5789999999999999999999999876544

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.18  E-value=0.034  Score=35.81  Aligned_cols=26  Identities=23%  Similarity=0.520  Sum_probs=24.0

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRS   27 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~   27 (162)
                      |.|++|..+++.|+..|. ++.++|.+
T Consensus         9 G~G~vGs~va~~L~~~Gv~~i~lvD~d   35 (135)
T PF00899_consen    9 GAGGVGSEVAKNLARSGVGKITLVDDD   35 (135)
T ss_dssp             STSHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred             CcCHHHHHHHHHHHHhCCCceeecCCc
Confidence            678999999999999998 89999986

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=96.17  E-value=0.081  Score=38.93  Aligned_cols=74  Identities=18%  Similarity=0.236  Sum_probs=50.3

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCC---------------ceeEEEeccCChHHHHHHHHHHHHHcCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDP---------------RFFVQELDVLSEQSVQNVLSNVLEKFGK   66 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~---------------~~~~~~~D~~~~~~i~~~~~~~~~~~~~   66 (162)
                      |.|-+|.+++..|+++|++|.+.+|++++.+.+.+..               ...++-+=+.+. .++.+++++.....+
T Consensus         7 GlG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~vp~~-~~~~v~~~l~~~l~~   85 (298)
T TIGR00872         7 GLGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVMVPHG-IVDAVLEELAPTLEK   85 (298)
T ss_pred             cchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEEcCch-HHHHHHHHHHhhCCC
Confidence            4678999999999999999999999988766554321               112222223344 778888887765544


Q ss_pred             ccEEEECCCC
Q 042185           67 IDVLVNNAGV   76 (162)
Q Consensus        67 id~vi~~ag~   76 (162)
                      =+++|++...
T Consensus        86 g~ivid~st~   95 (298)
T TIGR00872        86 GDIVIDGGNS   95 (298)
T ss_pred             CCEEEECCCC
Confidence            4667776544

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.16  E-value=0.028  Score=41.56  Aligned_cols=72  Identities=18%  Similarity=0.265  Sum_probs=46.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |++|++|..++......|++|+.++++.++.+.+.+-.--.+  .|..+.+.....+....  .+.+|+++.+.|.
T Consensus       146 ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~v--i~~~~~~~~~~~~~~~~--~~gvdvv~d~~G~  217 (325)
T TIGR02825       146 AAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVA--FNYKTVKSLEETLKKAS--PDGYDCYFDNVGG  217 (325)
T ss_pred             CCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEE--EeccccccHHHHHHHhC--CCCeEEEEECCCH
Confidence            678999999888777889999999998887776654222122  23333223444443332  1368999988773

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.12  E-value=0.037  Score=39.07  Aligned_cols=26  Identities=23%  Similarity=0.394  Sum_probs=23.7

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRS   27 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~   27 (162)
                      |.||+|.++++.|+..|. ++.++|.+
T Consensus        28 G~GglGs~va~~La~~Gvg~i~lvD~D   54 (228)
T cd00757          28 GAGGLGSPAAEYLAAAGVGKLGLVDDD   54 (228)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            689999999999999998 89999876

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.10  E-value=0.045  Score=39.78  Aligned_cols=72  Identities=19%  Similarity=0.186  Sum_probs=47.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+++++|..++..+...|++|++++++.++.+.+.... .. ..+|..+.+..+.+.+.. . ...+|.+++++|.
T Consensus       147 g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g-~~-~~~~~~~~~~~~~~~~~~-~-~~~~d~vi~~~g~  218 (323)
T cd05276         147 GGASGVGTAAIQLAKALGARVIATAGSEEKLEACRALG-AD-VAINYRTEDFAEEVKEAT-G-GRGVDVILDMVGG  218 (323)
T ss_pred             cCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcC-CC-EEEeCCchhHHHHHHHHh-C-CCCeEEEEECCch
Confidence            67899999999999999999999999887776664322 21 223443333223322221 1 2369999999874

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.06  E-value=0.02  Score=41.85  Aligned_cols=35  Identities=20%  Similarity=0.391  Sum_probs=30.8

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhc
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQ   36 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~   36 (162)
                      |+||-+++++..|++.|+ +|.+++|+.++.+++.+
T Consensus       134 GaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~  169 (283)
T PRK14027        134 GAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALAD  169 (283)
T ss_pred             CCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHH
Confidence            578999999999999998 79999999888777654

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.03  E-value=0.035  Score=44.20  Aligned_cols=36  Identities=31%  Similarity=0.437  Sum_probs=31.1

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD   37 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~   37 (162)
                      |+||+|++++..|+++|++|++++|+.++.+++.++
T Consensus       386 GaGGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~  421 (529)
T PLN02520        386 GAGGAGKALAYGAKEKGARVVIANRTYERAKELADA  421 (529)
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            347999999999999999999999998887777543

>PRK04148 hypothetical protein; Provisional

Probab=96.03  E-value=0.017  Score=37.31  Aligned_cols=45  Identities=9%  Similarity=0.080  Sum_probs=36.6

Q ss_pred             hHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChH
Q 042185            6 IGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQ   51 (162)
Q Consensus         6 iG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~   51 (162)
                      .|.++|..|.+.|++|+.+|.++...+.+++. ...++..|+.+++
T Consensus        27 fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~-~~~~v~dDlf~p~   71 (134)
T PRK04148         27 FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL-GLNAFVDDLFNPN   71 (134)
T ss_pred             CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh-CCeEEECcCCCCC
Confidence            77889999999999999999999877766543 4577778887654

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.03  E-value=0.034  Score=38.56  Aligned_cols=26  Identities=23%  Similarity=0.406  Sum_probs=24.2

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRS   27 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~   27 (162)
                      |.||+|.++++.|+..|. ++.++|.+
T Consensus        28 G~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        28 GAGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            578999999999999998 89999987

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>COG4123 Predicted O-methyltransferase [General function prediction only]

Probab=96.03  E-value=0.029  Score=40.01  Aligned_cols=108  Identities=15%  Similarity=0.227  Sum_probs=62.0

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      |+|.+|..++++..+  ++|..+.+.++..+.+..       +.++.++..|+.+..      +...  +.++|.||.|.
T Consensus        54 G~G~l~L~la~r~~~--a~I~~VEiq~~~a~~A~~nv~ln~l~~ri~v~~~Di~~~~------~~~~--~~~fD~Ii~NP  123 (248)
T COG4123          54 GNGALGLLLAQRTEK--AKIVGVEIQEEAAEMAQRNVALNPLEERIQVIEADIKEFL------KALV--FASFDLIICNP  123 (248)
T ss_pred             CcCHHHHHHhccCCC--CcEEEEEeCHHHHHHHHHHHHhCcchhceeEehhhHHHhh------hccc--ccccCEEEeCC
Confidence            456666666655443  789999998776555433       356777777764432      2221  23689999999


Q ss_pred             CCCCCCCC--CCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEec
Q 042185           75 GVQCVGPL--AEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG  124 (162)
Q Consensus        75 g~~~~~~~--~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~is  124 (162)
                      .+......  .+--.+..+.....++...+..+..+   +  +.+|.+.++.
T Consensus       124 Pyf~~~~~~~~~~~~~~Ar~e~~~~le~~i~~a~~~---l--k~~G~l~~V~  170 (248)
T COG4123         124 PYFKQGSRLNENPLRAIARHEITLDLEDLIRAAAKL---L--KPGGRLAFVH  170 (248)
T ss_pred             CCCCCccccCcChhhhhhhhhhcCCHHHHHHHHHHH---c--cCCCEEEEEe
Confidence            98654433  22223333455555555555544443   3  2345555554

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.01  E-value=0.037  Score=41.19  Aligned_cols=72  Identities=21%  Similarity=0.263  Sum_probs=46.4

Q ss_pred             CCCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|++|..++......|+ +|+.++++.++.+.+.++.....+ .|..+ +++...+.++..  +.+|.++.+.|.
T Consensus       162 ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~v-i~~~~-~~~~~~i~~~~~--~gvd~vid~~g~  234 (345)
T cd08293         162 GAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAA-INYKT-DNVAERLRELCP--EGVDVYFDNVGG  234 (345)
T ss_pred             CCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEE-EECCC-CCHHHHHHHHCC--CCceEEEECCCc
Confidence            6789999999887778899 799999988877766542222221 23322 233333333321  368999988773

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.97  E-value=0.087  Score=33.51  Aligned_cols=71  Identities=20%  Similarity=0.343  Sum_probs=49.7

Q ss_pred             CCCCchHHHHHHHHHH-CCCeEE-EEecCh----------------------hhHHhhhcCCceeEEEeccCChHHHHHH
Q 042185            1 CSQGGIGHALARAFAA-SDCRVV-ATGRSK----------------------ATMADLEQDPRFFVQELDVLSEQSVQNV   56 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~-~g~~vi-~~~r~~----------------------~~~~~~~~~~~~~~~~~D~~~~~~i~~~   56 (162)
                      |.+|-+|+.+++.+.+ .+.+++ .++|+.                      ..++++.++  .. +-+|+|.++.+...
T Consensus         7 G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~--~D-VvIDfT~p~~~~~~   83 (124)
T PF01113_consen    7 GASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE--AD-VVIDFTNPDAVYDN   83 (124)
T ss_dssp             TTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH---S-EEEEES-HHHHHHH
T ss_pred             CCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc--CC-EEEEcCChHHhHHH
Confidence            6779999999999998 577754 566765                      223333222  33 45799999999999


Q ss_pred             HHHHHHHcCCccEEEECCCC
Q 042185           57 LSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus        57 ~~~~~~~~~~id~vi~~ag~   76 (162)
                      ++...+.  .+..|+-+.|+
T Consensus        84 ~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   84 LEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             HHHHHHH--T-EEEEE-SSS
T ss_pred             HHHHHhC--CCCEEEECCCC
Confidence            9988876  78889888886

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=95.93  E-value=0.021  Score=44.85  Aligned_cols=63  Identities=21%  Similarity=0.302  Sum_probs=43.7

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      |+||+|++++..|++.|++|++.+|+.++.+++.++......  +.   +++.        .....|+||++....
T Consensus       339 GaGgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~~~--~~---~~~~--------~l~~~DiVInatP~g  401 (477)
T PRK09310        339 GAGGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGKAF--PL---ESLP--------ELHRIDIIINCLPPS  401 (477)
T ss_pred             cCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccee--ch---hHhc--------ccCCCCEEEEcCCCC
Confidence            358999999999999999999999998877766543221111  11   1111        134789999998754

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=95.92  E-value=0.039  Score=41.40  Aligned_cols=72  Identities=19%  Similarity=0.326  Sum_probs=45.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |++|++|...+......|++|+.++++.++.+.+..+..... ..|..+.+++...+.+..  .+.+|.++.+.|
T Consensus       166 GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~-vi~~~~~~~~~~~i~~~~--~~gvD~v~d~vG  237 (348)
T PLN03154        166 AASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE-AFNYKEEPDLDAALKRYF--PEGIDIYFDNVG  237 (348)
T ss_pred             cCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCE-EEECCCcccHHHHHHHHC--CCCcEEEEECCC
Confidence            678999999988888889999999998877766542222221 123322223333333322  136899998877

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.87  E-value=0.028  Score=43.65  Aligned_cols=68  Identities=18%  Similarity=0.248  Sum_probs=49.2

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |.|.+|..+++.|.++|++|++++++++..+++.++ ....++..|.++.+.+++.-      ..+.|.+|.+..
T Consensus       238 G~G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~------~~~a~~vi~~~~  306 (453)
T PRK09496        238 GGGNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEG------IDEADAFIALTN  306 (453)
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcC------CccCCEEEECCC
Confidence            468999999999999999999999999887776654 35667778888776544331      124566655443

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=95.85  E-value=0.19  Score=37.88  Aligned_cols=70  Identities=17%  Similarity=0.106  Sum_probs=45.8

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcC-CccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFG-KIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~-~id~vi~~ag   75 (162)
                      |.|.||...+..+...|+ +|+++++++++++.+++......+.-.-.+ +....+.+.   ..| ..|++|-++|
T Consensus       176 GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~-~~~~~~~~~---t~g~g~D~vie~~G  247 (350)
T COG1063         176 GAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSED-DAGAEILEL---TGGRGADVVIEAVG  247 (350)
T ss_pred             CCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccc-cHHHHHHHH---hCCCCCCEEEECCC
Confidence            578999999887778897 788889999999888663333333222221 122222221   223 6999999999

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.79  E-value=0.065  Score=41.16  Aligned_cols=38  Identities=16%  Similarity=0.349  Sum_probs=32.4

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCc
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPR   39 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~   39 (162)
                      |.|.+|.-+|++|+++|. +|+++.|+.++..++..+..
T Consensus       185 GAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~  223 (414)
T COG0373         185 GAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG  223 (414)
T ss_pred             cccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence            467899999999999996 89999999998888766544

>PRK14968 putative methyltransferase; Provisional

Probab=95.77  E-value=0.093  Score=35.45  Aligned_cols=101  Identities=17%  Similarity=0.107  Sum_probs=53.4

Q ss_pred             HHHHHHHCCCeEEEEecChhhHHhhhcC-----Cc---eeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCCC
Q 042185           10 LARAFAASDCRVVATGRSKATMADLEQD-----PR---FFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGP   81 (162)
Q Consensus        10 ia~~l~~~g~~vi~~~r~~~~~~~~~~~-----~~---~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~   81 (162)
                      ++..+++++.+|+.++.+++..+.+...     ..   +.++.+|+.+.         ..+  .++|.++.|.......+
T Consensus        37 ~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~~--~~~d~vi~n~p~~~~~~  105 (188)
T PRK14968         37 VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FRG--DKFDVILFNPPYLPTEE  105 (188)
T ss_pred             HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------ccc--cCceEEEECCCcCCCCc
Confidence            3444455588999999998766554321     11   67777776432         111  26899999987654332


Q ss_pred             CCCCChHHHHHHHHhhhhh---HHHHHHHHHHhHhhcCCCeEEEec
Q 042185           82 LAEVPLSAMEQTFNTNVFG---PMRLVQAVVPHMAYRKKGKIINVG  124 (162)
Q Consensus        82 ~~~~~~~~~~~~~~~n~~~---~~~~~~~~~~~~~~~~~~~iv~is  124 (162)
                      ...+ .+.+...+.....+   .-.+++.+.+.|  +++|.++++.
T Consensus       106 ~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~L--k~gG~~~~~~  148 (188)
T PRK14968        106 EEEW-DDWLNYALSGGKDGREVIDRFLDEVGRYL--KPGGRILLLQ  148 (188)
T ss_pred             hhhh-hhhhhhhhccCcChHHHHHHHHHHHHHhc--CCCeEEEEEE
Confidence            2221 12222222222222   223455556656  3456666554

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=95.74  E-value=0.033  Score=41.27  Aligned_cols=63  Identities=17%  Similarity=0.301  Sum_probs=43.7

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |.|.+|..+++.|...|. +|++++|+.++.+++..+......     +.+++...+       ...|++|.+.+.
T Consensus       185 GaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~~-----~~~~~~~~l-------~~aDvVi~at~~  248 (311)
T cd05213         185 GAGEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAV-----PLDELLELL-------NEADVVISATGA  248 (311)
T ss_pred             CcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeEE-----eHHHHHHHH-------hcCCEEEECCCC
Confidence            468999999999998775 799999998877666554333222     222333222       356999999985

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=95.73  E-value=0.12  Score=38.00  Aligned_cols=75  Identities=12%  Similarity=0.118  Sum_probs=49.8

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC--------------C-ceeEEEeccCChHHHHHHHHHHHHHcCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD--------------P-RFFVQELDVLSEQSVQNVLSNVLEKFGK   66 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~--------------~-~~~~~~~D~~~~~~i~~~~~~~~~~~~~   66 (162)
                      |.|-+|.++++.|.+.|++|++.+|++++.+.+.+.              . ...++-.=+.+.+.++.+++.+.....+
T Consensus         7 GlG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~s~~~~~~~~~~advVi~~vp~~~~~~~v~~~i~~~l~~   86 (299)
T PRK12490          7 GLGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGKLGITARHSLEELVSKLEAPRTIWVMVPAGEVTESVIKDLYPLLSP   86 (299)
T ss_pred             cccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecCCHHHHHHhCCCCCEEEEEecCchHHHHHHHHHhccCCC
Confidence            467899999999999999999999998766654321              0 0123333344555777777776554433


Q ss_pred             ccEEEECCCC
Q 042185           67 IDVLVNNAGV   76 (162)
Q Consensus        67 id~vi~~ag~   76 (162)
                      =.++|++...
T Consensus        87 g~ivid~st~   96 (299)
T PRK12490         87 GDIVVDGGNS   96 (299)
T ss_pred             CCEEEECCCC
Confidence            3567776554

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=95.68  E-value=0.15  Score=34.87  Aligned_cols=35  Identities=23%  Similarity=0.343  Sum_probs=28.0

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ   36 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~   36 (162)
                      |.|-+|..+|..|++.|++|+.+|.+++..+.+.+
T Consensus         7 GlGyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~   41 (185)
T PF03721_consen    7 GLGYVGLPLAAALAEKGHQVIGVDIDEEKVEALNN   41 (185)
T ss_dssp             --STTHHHHHHHHHHTTSEEEEE-S-HHHHHHHHT
T ss_pred             CCCcchHHHHHHHHhCCCEEEEEeCChHHHHHHhh
Confidence            57899999999999999999999999887777654

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=95.67  E-value=0.27  Score=36.03  Aligned_cols=124  Identities=18%  Similarity=0.184  Sum_probs=77.9

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhh-HHhhhc-C-----------CceeEEEeccCChHHHHHHHH---HHHHHcC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKAT-MADLEQ-D-----------PRFFVQELDVLSEQSVQNVLS---NVLEKFG   65 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~-~~~~~~-~-----------~~~~~~~~D~~~~~~i~~~~~---~~~~~~~   65 (162)
                      |-|-+|..++.+|.++|+.|.+.+|++++ .+.+.. .           ....++-.=+.|.++++.++.   .+.+...
T Consensus         7 GLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V~~g~~g~~~~~~   86 (286)
T COG2084           7 GLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAVLFGENGLLEGLK   86 (286)
T ss_pred             cCchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHHHhCccchhhcCC
Confidence            45788999999999999999999999887 333322 1           234455555677888888873   4554443


Q ss_pred             CccEEEECCCCCCC------------------CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccc
Q 042185           66 KIDVLVNNAGVQCV------------------GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSV  126 (162)
Q Consensus        66 ~id~vi~~ag~~~~------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~  126 (162)
                      +=.++|.+.-+.+.                  .|+..-...-....+.+.+-+.-..+....|.|..- ..+|++++..
T Consensus        87 ~G~i~IDmSTisp~~a~~~a~~~~~~G~~~lDAPVsGg~~~A~~GtLtimvGG~~~~f~r~~pvl~~~-g~~i~~~G~~  164 (286)
T COG2084          87 PGAIVIDMSTISPETARELAAALAAKGLEFLDAPVSGGVPGAAAGTLTIMVGGDAEAFERAKPVLEAM-GKNIVHVGPV  164 (286)
T ss_pred             CCCEEEECCCCCHHHHHHHHHHHHhcCCcEEecCccCCchhhhhCceEEEeCCCHHHHHHHHHHHHHh-cCceEEECCC
Confidence            44556655533221                  233333444445556666666666777777766433 3467777653

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.60  E-value=0.08  Score=37.02  Aligned_cols=27  Identities=26%  Similarity=0.358  Sum_probs=24.5

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecCh
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSK   28 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~   28 (162)
                      |.||+|..+++.|+..|. ++.++|.+.
T Consensus        35 G~GglGs~ia~~La~~Gvg~i~lvD~D~   62 (212)
T PRK08644         35 GAGGLGSNIAVALARSGVGNLKLVDFDV   62 (212)
T ss_pred             CcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            578999999999999998 699999974

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=95.60  E-value=0.096  Score=39.19  Aligned_cols=64  Identities=20%  Similarity=0.291  Sum_probs=44.3

Q ss_pred             CCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            3 QGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      -||+|...++.....|++|+.++|++++++.+.+-..-.++..-  +.+..+.+-+       ..|.++.+++
T Consensus       175 ~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~--~~~~~~~~~~-------~~d~ii~tv~  238 (339)
T COG1064         175 AGGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSS--DSDALEAVKE-------IADAIIDTVG  238 (339)
T ss_pred             CcHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcC--CchhhHHhHh-------hCcEEEECCC
Confidence            34999888887778999999999999988777664444444322  4433333322       1788888887

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=95.58  E-value=0.12  Score=38.65  Aligned_cols=70  Identities=26%  Similarity=0.272  Sum_probs=45.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHc-C-CccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF-G-KIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~-~id~vi~~ag~   76 (162)
                      ||+||+|...+......|++++++..+.++.+.+.+...-+.+.  ..+.+    +.+++.+.. + .+|+++...|.
T Consensus       150 gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~--y~~~~----~~~~v~~~t~g~gvDvv~D~vG~  221 (326)
T COG0604         150 GAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVIN--YREED----FVEQVRELTGGKGVDVVLDTVGG  221 (326)
T ss_pred             cCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEc--CCccc----HHHHHHHHcCCCCceEEEECCCH
Confidence            79999999999988889977766666666555554433333332  33322    333443333 3 59999999885

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.54  E-value=0.024  Score=38.60  Aligned_cols=33  Identities=24%  Similarity=0.383  Sum_probs=27.3

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADL   34 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~   34 (162)
                      |+|-+|+.+|..++..|++|.+.+++++.+++.
T Consensus         6 GaG~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~   38 (180)
T PF02737_consen    6 GAGTMGRGIAALFARAGYEVTLYDRSPEALERA   38 (180)
T ss_dssp             S-SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHH
T ss_pred             cCCHHHHHHHHHHHhCCCcEEEEECChHHHHhh
Confidence            568999999999999999999999998765543

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=95.51  E-value=0.092  Score=39.57  Aligned_cols=72  Identities=21%  Similarity=0.179  Sum_probs=46.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      ||+||+|.+.++.....|+..+++.++.+.++-++.-..-..  +|..+++-++.+.+..   .+++|+|+-|.|..
T Consensus       165 ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~v--vdy~~~~~~e~~kk~~---~~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  165 GGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEV--VDYKDENVVELIKKYT---GKGVDVVLDCVGGS  236 (347)
T ss_pred             eCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEe--ecCCCHHHHHHHHhhc---CCCccEEEECCCCC
Confidence            789999999999888889655666666555554443332222  4555543333322221   56899999999874

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.47  E-value=0.069  Score=41.27  Aligned_cols=35  Identities=17%  Similarity=0.382  Sum_probs=29.4

Q ss_pred             CCCchHHHHHHHHHHCC-CeEEEEecChhhHHhhhc
Q 042185            2 SQGGIGHALARAFAASD-CRVVATGRSKATMADLEQ   36 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g-~~vi~~~r~~~~~~~~~~   36 (162)
                      |.|.+|..+++.|...| .+|++++|+.++.++...
T Consensus       187 GaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~  222 (417)
T TIGR01035       187 GAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAK  222 (417)
T ss_pred             CChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH
Confidence            46899999999999999 589999999887665544

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.46  E-value=0.14  Score=35.52  Aligned_cols=26  Identities=19%  Similarity=0.387  Sum_probs=24.3

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRS   27 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~   27 (162)
                      |.||+|..+++.|+..|. +++++|++
T Consensus        28 G~GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        28 GLGGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             CcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            578999999999999999 79999998

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=95.45  E-value=0.1  Score=38.45  Aligned_cols=70  Identities=20%  Similarity=0.278  Sum_probs=45.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|++|..++......|++|+.+.++.++.+.+.+...-.+  .|..+. +....+.+..  .+.+|.++.+.|
T Consensus       151 ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~v--i~~~~~-~~~~~v~~~~--~~gvd~vld~~g  220 (329)
T cd08294         151 GAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAV--FNYKTV-SLEEALKEAA--PDGIDCYFDNVG  220 (329)
T ss_pred             cCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEE--EeCCCc-cHHHHHHHHC--CCCcEEEEECCC
Confidence            688999999888888889999999998887776655322222  233332 2222222221  136899988776

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=95.43  E-value=0.051  Score=43.99  Aligned_cols=51  Identities=16%  Similarity=0.201  Sum_probs=41.3

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHH
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSV   53 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i   53 (162)
                      |.|-+|+.+++.|.++|.+++++++|+++.++..+ ....++..|.++++.+
T Consensus       407 G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~-~g~~v~~GDat~~~~L  457 (601)
T PRK03659        407 GFGRFGQVIGRLLMANKMRITVLERDISAVNLMRK-YGYKVYYGDATQLELL  457 (601)
T ss_pred             cCchHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh-CCCeEEEeeCCCHHHH
Confidence            56789999999999999999999999998887754 3455666777776544

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=95.43  E-value=0.12  Score=37.77  Aligned_cols=34  Identities=15%  Similarity=0.189  Sum_probs=29.4

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLE   35 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~   35 (162)
                      |.|-+|..++..|++.|++|++.+|+++..+.+.
T Consensus         6 G~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~   39 (291)
T TIGR01505         6 GLGIMGSPMSINLAKAGYQLHVTTIGPEVADELL   39 (291)
T ss_pred             EecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH
Confidence            4688999999999999999999999987766543

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=95.39  E-value=0.2  Score=36.87  Aligned_cols=75  Identities=16%  Similarity=0.214  Sum_probs=48.9

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCC---------------ceeEEEeccCChHHHHHHHHHHHHHcCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDP---------------RFFVQELDVLSEQSVQNVLSNVLEKFGK   66 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~---------------~~~~~~~D~~~~~~i~~~~~~~~~~~~~   66 (162)
                      |.|-+|.++++.|++.|++|++.+|+++..+++.+..               ...++-.=+.+.+.++.+++.+.....+
T Consensus         7 GlG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~~~~e~~~~~~~~dvvi~~v~~~~~~~~v~~~l~~~l~~   86 (301)
T PRK09599          7 GLGRMGGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATGADSLEELVAKLPAPRVVWLMVPAGEITDATIDELAPLLSP   86 (301)
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCeecCCHHHHHhhcCCCCEEEEEecCCcHHHHHHHHHHhhCCC
Confidence            4678999999999999999999999987766543210               0122222334444667777776655444


Q ss_pred             ccEEEECCCC
Q 042185           67 IDVLVNNAGV   76 (162)
Q Consensus        67 id~vi~~ag~   76 (162)
                      =+++|.+...
T Consensus        87 g~ivid~st~   96 (301)
T PRK09599         87 GDIVIDGGNS   96 (301)
T ss_pred             CCEEEeCCCC
Confidence            4566666543

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=95.36  E-value=0.1  Score=40.88  Aligned_cols=68  Identities=25%  Similarity=0.219  Sum_probs=44.1

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      .||-+|.++|+.+..+|++|+++.-... +   .....+.++  ++.+.+   .+.+.+.+.+. .|++|.+|.+..+
T Consensus       280 SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~---~~p~~v~~i--~V~ta~---eM~~av~~~~~-~Di~I~aAAVaDy  347 (475)
T PRK13982        280 SSGKQGFAIAAAAAAAGAEVTLISGPVD-L---ADPQGVKVI--HVESAR---QMLAAVEAALP-ADIAIFAAAVADW  347 (475)
T ss_pred             CchHHHHHHHHHHHHCCCcEEEEeCCcC-C---CCCCCceEE--EecCHH---HHHHHHHhhCC-CCEEEEeccccce
Confidence            5788999999999999999998874322 1   111233443  333333   44444444443 6999999998543

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=95.36  E-value=0.18  Score=38.95  Aligned_cols=35  Identities=17%  Similarity=0.276  Sum_probs=30.4

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ   36 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~   36 (162)
                      |.|.||+.++..+...|++|+++++++.+++.+..
T Consensus       209 G~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~  243 (413)
T cd00401         209 GYGDVGKGCAQSLRGQGARVIVTEVDPICALQAAM  243 (413)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHh
Confidence            57899999999999999999999999887766644

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=95.34  E-value=0.055  Score=41.86  Aligned_cols=36  Identities=17%  Similarity=0.429  Sum_probs=30.2

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQD   37 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~   37 (162)
                      |+|.+|..+++.|...|+ +|++++|+.++...+..+
T Consensus       189 GaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~  225 (423)
T PRK00045        189 GAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEE  225 (423)
T ss_pred             CchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH
Confidence            569999999999999998 899999998876655443

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=95.27  E-value=0.14  Score=37.70  Aligned_cols=72  Identities=19%  Similarity=0.243  Sum_probs=46.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+++++|.+++..+...|++|+.++++.++.+.+.+..... ...|..+.+..+. +.+..  .+.+|+++.+.|.
T Consensus       153 g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~-v~~~~--~~~~d~vi~~~g~  224 (329)
T cd05288         153 AAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFD-AAINYKTPDLAEA-LKEAA--PDGIDVYFDNVGG  224 (329)
T ss_pred             cCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCc-eEEecCChhHHHH-HHHhc--cCCceEEEEcchH
Confidence            67899999999999899999999999887776665422221 1123333222222 22222  1469999998763

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.26  E-value=0.035  Score=38.92  Aligned_cols=34  Identities=18%  Similarity=0.289  Sum_probs=29.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhh
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADL   34 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~   34 (162)
                      ||+|.+|.+++..|++.|++|++.+|++++.+..
T Consensus         7 GG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l   40 (219)
T TIGR01915         7 GGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEA   40 (219)
T ss_pred             cCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHH
Confidence            5678899999999999999999999998766543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=95.24  E-value=0.077  Score=38.29  Aligned_cols=107  Identities=21%  Similarity=0.238  Sum_probs=58.6

Q ss_pred             CCCCchHHHHHHHHHHCC----CeEEEEecChhhHHhhhcC----CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            1 CSQGGIGHALARAFAASD----CRVVATGRSKATMADLEQD----PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g----~~vi~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      |++|.+|..++..|+..|    .+|+++|.++++++....+    .... ....++..++..       +.+..-|+||.
T Consensus         5 GagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~-~~~~i~~~~d~~-------~~~~~aDiVv~   76 (263)
T cd00650           5 GAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL-ADIKVSITDDPY-------EAFKDADVVII   76 (263)
T ss_pred             CCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc-cCcEEEECCchH-------HHhCCCCEEEE
Confidence            676889999999999988    6899999987665543221    1111 111221111221       22345699999


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-CCCeEEEecc
Q 042185           73 NAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKIINVGS  125 (162)
Q Consensus        73 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS  125 (162)
                      .+|.....   ..+.   ...+..|+    .+.+.+.+.+.+. +++.++++|-
T Consensus        77 t~~~~~~~---g~~r---~~~~~~n~----~i~~~i~~~i~~~~p~a~~i~~tN  120 (263)
T cd00650          77 TAGVGRKP---GMGR---LDLLKRNV----PIVKEIGDNIEKYSPDAWIIVVSN  120 (263)
T ss_pred             CCCCCCCc---CCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecC
Confidence            99874331   2221   12222232    3445555555433 4566666653

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.23  E-value=0.11  Score=39.54  Aligned_cols=26  Identities=23%  Similarity=0.340  Sum_probs=24.1

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRS   27 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~   27 (162)
                      |.||+|..+++.|+..|. ++.++|++
T Consensus       142 G~GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        142 GAGGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            578999999999999998 89999987

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=95.23  E-value=0.061  Score=43.70  Aligned_cols=51  Identities=14%  Similarity=0.141  Sum_probs=40.2

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHH
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSV   53 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i   53 (162)
                      |.|-+|..+++.|.++|.+++++++|+++.++..+. ...++..|.++++-+
T Consensus       407 G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~-g~~v~~GDat~~~~L  457 (621)
T PRK03562        407 GFGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKF-GMKVFYGDATRMDLL  457 (621)
T ss_pred             ecChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhc-CCeEEEEeCCCHHHH
Confidence            567899999999999999999999999988877553 345566666665543

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.22  E-value=0.16  Score=39.47  Aligned_cols=32  Identities=28%  Similarity=0.442  Sum_probs=28.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHH
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMA   32 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~   32 (162)
                      ||.|.+|.+++..|.+.|++|++.+|+++...
T Consensus         7 GG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~   38 (437)
T PRK08655          7 GGTGGLGKWFARFLKEKGFEVIVTGRDPKKGK   38 (437)
T ss_pred             ecCCHHHHHHHHHHHHCCCEEEEEECChHHHH
Confidence            56899999999999999999999999877643

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=95.21  E-value=0.15  Score=36.32  Aligned_cols=28  Identities=21%  Similarity=0.350  Sum_probs=25.0

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChh
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKA   29 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~   29 (162)
                      |.||+|.++++.|+..|. ++.++|.+.-
T Consensus         6 G~GGlG~eilk~La~~Gvg~i~ivD~D~V   34 (234)
T cd01484           6 GAGGIGCELLKNLALMGFGQIHVIDMDTI   34 (234)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCCEE
Confidence            688999999999999998 8999998743

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.19  E-value=0.18  Score=37.94  Aligned_cols=26  Identities=23%  Similarity=0.401  Sum_probs=24.2

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRS   27 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~   27 (162)
                      |.||+|..+++.|+..|. ++.++|.+
T Consensus        31 G~GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         31 GAGALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            578999999999999998 89999986

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.18  E-value=0.28  Score=36.47  Aligned_cols=57  Identities=18%  Similarity=0.204  Sum_probs=38.4

Q ss_pred             CCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccC-ChHHHHHHHHHH
Q 042185            3 QGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVL-SEQSVQNVLSNV   60 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~-~~~~i~~~~~~~   60 (162)
                      -||||.--++.--.-|++|+.+++...+.+++.......++ +|.+ +++.++++.+.+
T Consensus       190 lGGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~f-v~~~~d~d~~~~~~~~~  247 (360)
T KOG0023|consen  190 LGGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVF-VDSTEDPDIMKAIMKTT  247 (360)
T ss_pred             CcccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCccee-EEecCCHHHHHHHHHhh
Confidence            34588655555556699999999998777776665555555 3555 676666665554

>PRK08223 hypothetical protein; Validated

Probab=95.18  E-value=0.098  Score=38.27  Aligned_cols=28  Identities=14%  Similarity=0.139  Sum_probs=24.9

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChh
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKA   29 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~   29 (162)
                      |.||+|..+++.|+..|. ++.++|.+.-
T Consensus        34 G~GGLGs~va~~LA~aGVG~i~lvD~D~V   62 (287)
T PRK08223         34 GLGGVGGIHLLTLARLGIGKFTIADFDVF   62 (287)
T ss_pred             CCCHHHHHHHHHHHHhCCCeEEEEeCCCc
Confidence            678999999999999998 8999998743

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.17  E-value=0.14  Score=36.55  Aligned_cols=29  Identities=21%  Similarity=0.328  Sum_probs=25.4

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhh
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKAT   30 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~   30 (162)
                      |.||+|..+++.|+..|. +++++|.+.-.
T Consensus        31 G~GglGs~va~~La~~Gvg~i~lvD~D~ve   60 (240)
T TIGR02355        31 GLGGLGCAASQYLAAAGVGNLTLLDFDTVS   60 (240)
T ss_pred             CcCHHHHHHHHHHHHcCCCEEEEEeCCccc
Confidence            678999999999999998 89999987543

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=95.16  E-value=0.26  Score=35.11  Aligned_cols=26  Identities=27%  Similarity=0.376  Sum_probs=23.3

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRS   27 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~   27 (162)
                      |-||.|.-.++.|++.|. ++.++|.+
T Consensus        37 GiGGVGSw~veALaRsGig~itlID~D   63 (263)
T COG1179          37 GIGGVGSWAVEALARSGIGRITLIDMD   63 (263)
T ss_pred             ecCchhHHHHHHHHHcCCCeEEEEecc
Confidence            468999999999999998 89999875

>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase

Probab=95.15  E-value=0.63  Score=33.66  Aligned_cols=106  Identities=14%  Similarity=0.136  Sum_probs=59.0

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC------CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |.|+....++..+...| .|+.++.+...++.+++.      .++.+...|..+.          ....+.+|.|+..+.
T Consensus        81 g~G~kt~~la~~~~~~g-~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~D~~~~----------~~~~~~fD~Vl~D~P  149 (264)
T TIGR00446        81 APGGKTTQISALMKNEG-AIVANEFSKSRTKVLIANINRCGVLNVAVTNFDGRVF----------GAAVPKFDAILLDAP  149 (264)
T ss_pred             CchHHHHHHHHHcCCCC-EEEEEcCCHHHHHHHHHHHHHcCCCcEEEecCCHHHh----------hhhccCCCEEEEcCC
Confidence            45666666666554444 899999998887765442      2345555554321          112346899998775


Q ss_pred             CCCCCCCCC-------CChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEec
Q 042185           76 VQCVGPLAE-------VPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG  124 (162)
Q Consensus        76 ~~~~~~~~~-------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~is  124 (162)
                      -...+.+..       ++.+.++..    ..-...+++...+.+  +++|.+||.+
T Consensus       150 csg~G~~~~~p~~~~~~~~~~~~~l----~~~q~~iL~~a~~~l--kpgG~lvYst  199 (264)
T TIGR00446       150 CSGEGVIRKDPSRKKNWSEEDIQEI----SALQKELIDSAFDAL--KPGGVLVYST  199 (264)
T ss_pred             CCCCcccccChhhhhcCCHHHHHHH----HHHHHHHHHHHHHhc--CCCCEEEEEe
Confidence            433322211       233333222    222334666666655  4568998864

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=95.15  E-value=0.1  Score=38.27  Aligned_cols=72  Identities=18%  Similarity=0.143  Sum_probs=42.5

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecCh---hhHHhhhcCCceeE-EEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSK---ATMADLEQDPRFFV-QELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~---~~~~~~~~~~~~~~-~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+||-+++++..|+..|+ +|.++.|+.   ++.+++.++....+ ....+.+.++...    +.+...+.|+|||+...
T Consensus       131 GaGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~----l~~~~~~aDivINaTp~  206 (288)
T PRK12749        131 GAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQA----FAEALASADILTNGTKV  206 (288)
T ss_pred             CCcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhh----hhhhcccCCEEEECCCC
Confidence            467889999999999997 899999995   35555544221110 0011112221111    11223468999999865


Q ss_pred             C
Q 042185           77 Q   77 (162)
Q Consensus        77 ~   77 (162)
                      .
T Consensus       207 G  207 (288)
T PRK12749        207 G  207 (288)
T ss_pred             C
Confidence            4

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=95.14  E-value=0.15  Score=34.66  Aligned_cols=68  Identities=19%  Similarity=0.094  Sum_probs=46.0

Q ss_pred             CCCCchHHHHHHHHHHCCC--eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFAASDC--RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      ||+|-.|..+.+++.+.+-  +|+++.|...--  -...-.+....+|.+.+++   .    .+..-.+|+.|++-|..
T Consensus        25 GAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d--~at~k~v~q~~vDf~Kl~~---~----a~~~qg~dV~FcaLgTT   94 (238)
T KOG4039|consen   25 GATGLCGGGLLKHAQEAPQFSKVYAILRRELPD--PATDKVVAQVEVDFSKLSQ---L----ATNEQGPDVLFCALGTT   94 (238)
T ss_pred             eccccccHHHHHHHHhcccceeEEEEEeccCCC--ccccceeeeEEechHHHHH---H----HhhhcCCceEEEeeccc
Confidence            7899999999999999973  799998874211  1112344555566655443   2    33334789999999864

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=95.09  E-value=0.075  Score=34.72  Aligned_cols=33  Identities=24%  Similarity=0.372  Sum_probs=28.6

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLE   35 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~   35 (162)
                      |.|.||.-++.+|.+.|++|.+++|.. ..+.+.
T Consensus         5 G~GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~   37 (151)
T PF02558_consen    5 GAGAIGSLYAARLAQAGHDVTLVSRSP-RLEAIK   37 (151)
T ss_dssp             STSHHHHHHHHHHHHTTCEEEEEESHH-HHHHHH
T ss_pred             CcCHHHHHHHHHHHHCCCceEEEEccc-cHHhhh
Confidence            578999999999999999999999998 555543

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=95.08  E-value=0.11  Score=38.53  Aligned_cols=30  Identities=17%  Similarity=0.337  Sum_probs=25.6

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhH
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATM   31 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~   31 (162)
                      |.||+|.++++.|+..|. ++.++|.+.-..
T Consensus         6 GaGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~   36 (312)
T cd01489           6 GAGGIGCELLKNLVLTGFGEIHIIDLDTIDL   36 (312)
T ss_pred             CCCHHHHHHHHHHHHhcCCeEEEEcCCCcch
Confidence            579999999999999998 899999874433

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=95.08  E-value=0.17  Score=36.25  Aligned_cols=26  Identities=23%  Similarity=0.354  Sum_probs=23.5

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRS   27 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~   27 (162)
                      |.||+|.++++.|+..|. ++.++|.+
T Consensus        39 G~GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         39 GLGGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            568999999999999998 89999886

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=95.06  E-value=0.15  Score=38.11  Aligned_cols=68  Identities=15%  Similarity=0.164  Sum_probs=44.9

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+|++|...+..+...|+ +|+++++++++++.+.+-..-.+  +|..+. ++..    +.+..+.+|++|.++|.
T Consensus       177 G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~v--i~~~~~-~~~~----~~~~~g~~D~vid~~G~  245 (343)
T PRK09880        177 GVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKL--VNPQND-DLDH----YKAEKGYFDVSFEVSGH  245 (343)
T ss_pred             CCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEE--ecCCcc-cHHH----HhccCCCCCEEEECCCC
Confidence            358999999988888898 68899999888776654322222  344332 2322    22223569999999984

>PLN00203 glutamyl-tRNA reductase

Probab=95.00  E-value=0.06  Score=42.72  Aligned_cols=36  Identities=25%  Similarity=0.590  Sum_probs=31.0

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQD   37 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~   37 (162)
                      |+|.+|..+++.|...|+ +|+++.|+.++.+.+..+
T Consensus       273 GAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~  309 (519)
T PLN00203        273 GAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREE  309 (519)
T ss_pred             eCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH
Confidence            468999999999999997 799999998887776543

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=94.99  E-value=0.2  Score=36.43  Aligned_cols=73  Identities=15%  Similarity=0.183  Sum_probs=46.3

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCcee--------EEEecc----CChHHHHHHHHHHHHHcCCccE
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFF--------VQELDV----LSEQSVQNVLSNVLEKFGKIDV   69 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--------~~~~D~----~~~~~i~~~~~~~~~~~~~id~   69 (162)
                      |.|-||..++..|.++|.+|++.+++++..+++.....+.        .-.+|+    ...+.+.++++++.... +.+.
T Consensus         7 G~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~aDlVilavp~~~~~~~~~~l~~~l-~~~~   85 (279)
T PRK07417          7 GLGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDEASTDLSLLKDCDLVILALPIGLLLPPSEQLIPAL-PPEA   85 (279)
T ss_pred             eecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcccccCCHhHhcCCCEEEEcCCHHHHHHHHHHHHHhC-CCCc
Confidence            4678999999999999999999999987766553321100        112221    23445666677766543 4455


Q ss_pred             EEECCC
Q 042185           70 LVNNAG   75 (162)
Q Consensus        70 vi~~ag   75 (162)
                      +|...+
T Consensus        86 ii~d~~   91 (279)
T PRK07417         86 IVTDVG   91 (279)
T ss_pred             EEEeCc
Confidence            655554

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=94.99  E-value=0.2  Score=37.03  Aligned_cols=72  Identities=15%  Similarity=0.228  Sum_probs=45.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|++|...+......|++|+.++++.++.+.+.+-..-.++  |..+.+-.+. +.+... ...+|+++.+.|.
T Consensus       151 ~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i--~~~~~~~~~~-v~~~~~-~~~~d~vid~~g~  222 (324)
T cd08291         151 AAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVL--NSSDPDFLED-LKELIA-KLNATIFFDAVGG  222 (324)
T ss_pred             cCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEE--ECCCccHHHH-HHHHhC-CCCCcEEEECCCc
Confidence            5789999998887777899999999988877766542222222  3322222222 222211 1258999998873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PLN02688 pyrroline-5-carboxylate reductase

Probab=94.98  E-value=0.4  Score=34.53  Aligned_cols=71  Identities=23%  Similarity=0.337  Sum_probs=46.6

Q ss_pred             CCCchHHHHHHHHHHCCC----eEEEE-ecChhhHHhhhc--------------CCceeEEEeccCChHHHHHHHHHHHH
Q 042185            2 SQGGIGHALARAFAASDC----RVVAT-GRSKATMADLEQ--------------DPRFFVQELDVLSEQSVQNVLSNVLE   62 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~----~vi~~-~r~~~~~~~~~~--------------~~~~~~~~~D~~~~~~i~~~~~~~~~   62 (162)
                      |.|-+|.++++.|.+.|+    .|++. +|++++.+.+.+              +..+.++.+   ++++++.++.++..
T Consensus         7 G~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~~g~~~~~~~~e~~~~aDvVil~v---~~~~~~~vl~~l~~   83 (266)
T PLN02688          7 GAGKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQSLGVKTAASNTEVVKSSDVIILAV---KPQVVKDVLTELRP   83 (266)
T ss_pred             CCcHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHHcCCEEeCChHHHHhcCCEEEEEE---CcHHHHHHHHHHHh
Confidence            578899999999999997    88888 888776554432              122333333   45678888877765


Q ss_pred             HcCCccEEEECCC
Q 042185           63 KFGKIDVLVNNAG   75 (162)
Q Consensus        63 ~~~~id~vi~~ag   75 (162)
                      ...+=..+|...+
T Consensus        84 ~~~~~~~iIs~~~   96 (266)
T PLN02688         84 LLSKDKLLVSVAA   96 (266)
T ss_pred             hcCCCCEEEEecC
Confidence            4433345665543

>PLN02494 adenosylhomocysteinase

Probab=94.93  E-value=0.3  Score=38.29  Aligned_cols=33  Identities=24%  Similarity=0.317  Sum_probs=27.9

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADL   34 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~   34 (162)
                      |.|.||+.++..+...|++|+++++++.+....
T Consensus       261 GyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA  293 (477)
T PLN02494        261 GYGDVGKGCAAAMKAAGARVIVTEIDPICALQA  293 (477)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHH
Confidence            568999999999999999999999987654433

>PRK06849 hypothetical protein; Provisional

Probab=94.92  E-value=0.23  Score=37.89  Aligned_cols=73  Identities=14%  Similarity=0.169  Sum_probs=45.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEe--ccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQEL--DVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~--D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |++..+|..+++.|.+.|++|++++.+........... -.++.+  .-.+.+.....+.++.++. ++|++|-...
T Consensus        11 G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~-d~~~~~p~p~~d~~~~~~~L~~i~~~~-~id~vIP~~e   85 (389)
T PRK06849         11 GARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV-DGFYTIPSPRWDPDAYIQALLSIVQRE-NIDLLIPTCE   85 (389)
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh-hheEEeCCCCCCHHHHHHHHHHHHHHc-CCCEEEECCh
Confidence            67778999999999999999999999865433211111 112223  2234444444444555544 5899987765

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=94.84  E-value=0.25  Score=38.76  Aligned_cols=30  Identities=27%  Similarity=0.329  Sum_probs=26.0

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhH
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATM   31 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~   31 (162)
                      |.|.||+.+++.+...|++|+++++++...
T Consensus       261 G~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a  290 (476)
T PTZ00075        261 GYGDVGKGCAQALRGFGARVVVTEIDPICA  290 (476)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            467899999999999999999998886654

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=94.82  E-value=0.23  Score=37.20  Aligned_cols=35  Identities=20%  Similarity=0.295  Sum_probs=29.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ   36 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~   36 (162)
                      |+ |++|...+..+...|++|+.+++++++++.+.+
T Consensus       174 G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~  208 (349)
T TIGR03201       174 GA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKG  208 (349)
T ss_pred             CC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH
Confidence            55 999999988888889999999999888776644

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.81  E-value=0.2  Score=37.95  Aligned_cols=26  Identities=15%  Similarity=0.319  Sum_probs=23.9

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRS   27 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~   27 (162)
                      |.||+|.++++.|+..|. ++.++|.+
T Consensus        35 G~GGlGs~~a~~La~~Gvg~i~lvD~D   61 (355)
T PRK05597         35 GAGGLGSPALLYLAGAGVGHITIIDDD   61 (355)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            679999999999999998 89999986

>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating

Probab=94.81  E-value=0.25  Score=38.78  Aligned_cols=35  Identities=17%  Similarity=0.179  Sum_probs=30.2

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ   36 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~   36 (162)
                      |.|-+|.+++..|+++|++|++.+|+++..+++.+
T Consensus         6 GLG~MG~~mA~nL~~~G~~V~v~drt~~~~~~l~~   40 (467)
T TIGR00873         6 GLAVMGSNLALNMADHGFTVSVYNRTPEKTDEFLA   40 (467)
T ss_pred             eeHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHh
Confidence            45779999999999999999999999887776543

This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=94.80  E-value=0.52  Score=36.48  Aligned_cols=33  Identities=24%  Similarity=0.347  Sum_probs=29.5

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADL   34 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~   34 (162)
                      |.|-+|..+|..|+++|++|+..++++++.+.+
T Consensus        10 GlG~~G~~~A~~La~~G~~V~~~D~~~~~v~~l   42 (415)
T PRK11064         10 GLGYIGLPTAAAFASRQKQVIGVDINQHAVDTI   42 (415)
T ss_pred             CcchhhHHHHHHHHhCCCEEEEEeCCHHHHHHH
Confidence            567899999999999999999999998877764

>TIGR03704 PrmC_rel_meth putative protein-(glutamine-N5) methyltransferase, unknown substrate-specific

Probab=94.79  E-value=0.38  Score=34.54  Aligned_cols=112  Identities=20%  Similarity=0.203  Sum_probs=60.6

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC---CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD---PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      |+|.++..+++.+  .+.+|+.++.+++.++.++..   ....++..|+.+.-      ...  ..+++|.||.|..+.+
T Consensus        96 GsG~i~l~la~~~--~~~~v~~vDis~~al~~A~~N~~~~~~~~~~~D~~~~l------~~~--~~~~fDlVv~NPPy~~  165 (251)
T TIGR03704        96 GSGAVGAALAAAL--DGIELHAADIDPAAVRCARRNLADAGGTVHEGDLYDAL------PTA--LRGRVDILAANAPYVP  165 (251)
T ss_pred             chHHHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHHHHcCCEEEEeechhhc------chh--cCCCEeEEEECCCCCC
Confidence            5566777666553  356899999998876654432   22467777774421      111  1247899999998765


Q ss_pred             CCCCCCCChHHHHHHHHhhhh-------hHHHHHHHHHHhHhhcCCCeEEEecc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVF-------GPMRLVQAVVPHMAYRKKGKIINVGS  125 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~-------~~~~~~~~~~~~~~~~~~~~iv~isS  125 (162)
                      .+.......+..+.--...+.       -...+++.+..++  +++|.+++..+
T Consensus       166 ~~~~~~~~~e~~~~ep~~al~gg~dgl~~~~~i~~~a~~~L--~~gG~l~l~~~  217 (251)
T TIGR03704       166 TDAIALMPPEARDHEPRVALDGGADGLDVLRRVAAGAPDWL--APGGHLLVETS  217 (251)
T ss_pred             chhhhcCCHHHHhCCCHHHhcCCCcHHHHHHHHHHHHHHhc--CCCCEEEEEEC
Confidence            443333333321111111111       1223444444555  45678887654

This protein family is closely related to two different families of protein-(glutamine-N5) methyltransferase. The first is PrmB, which modifies ribosomal protein L3 in some bacteria. The second is PrmC (HemK), which modifies peptide chain release factors 1 and 2 in most bacteria and also in eukaryotes. The glutamine side chain-binding motif NPPY shared by PrmB and PrmC is N[VAT]PY in this family. The protein substrate is unknown.

>PRK05442 malate dehydrogenase; Provisional

Probab=94.74  E-value=0.21  Score=37.36  Aligned_cols=106  Identities=15%  Similarity=0.087  Sum_probs=59.3

Q ss_pred             CCCCchHHHHHHHHHHCCC-------eEEEEecChhh--HHhhhcCCceeEEEeccCChHHHH----HHHHHHHHHcCCc
Q 042185            1 CSQGGIGHALARAFAASDC-------RVVATGRSKAT--MADLEQDPRFFVQELDVLSEQSVQ----NVLSNVLEKFGKI   67 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-------~vi~~~r~~~~--~~~~~~~~~~~~~~~D~~~~~~i~----~~~~~~~~~~~~i   67 (162)
                      |++|.+|..++..|+..|.       +++++|.++..  ++         -...|+.+.....    .+.....+.+..-
T Consensus        11 GaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~---------g~a~Dl~~~~~~~~~~~~i~~~~y~~~~da   81 (326)
T PRK05442         11 GAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALE---------GVVMELDDCAFPLLAGVVITDDPNVAFKDA   81 (326)
T ss_pred             CCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccc---------eeehhhhhhhhhhcCCcEEecChHHHhCCC
Confidence            6679999999999988764       69999986431  11         1112222211000    0001112334577


Q ss_pred             cEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhh-c-CCCeEEEecc
Q 042185           68 DVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY-R-KKGKIINVGS  125 (162)
Q Consensus        68 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~-~~~~iv~isS  125 (162)
                      |+||.+||.... +  ..+.   ...+..|..    +++.+.+.+.+ . +.+.++++|-
T Consensus        82 DiVVitaG~~~k-~--g~tR---~dll~~Na~----i~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         82 DVALLVGARPRG-P--GMER---KDLLEANGA----IFTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             CEEEEeCCCCCC-C--CCcH---HHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEeCC
Confidence            999999997422 1  2333   334444544    66777776765 3 3566777764

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=94.68  E-value=0.21  Score=38.05  Aligned_cols=26  Identities=15%  Similarity=0.394  Sum_probs=23.9

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRS   27 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~   27 (162)
                      |.||+|..+++.|+..|. ++.++|.+
T Consensus        48 G~GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         48 GAGGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            678999999999999998 89999986

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=94.65  E-value=0.14  Score=37.97  Aligned_cols=110  Identities=17%  Similarity=0.166  Sum_probs=57.5

Q ss_pred             CCCCchHHHHHHHHHHCCC--eEEEEecCh--hhHHhhhcCCc----eeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            1 CSQGGIGHALARAFAASDC--RVVATGRSK--ATMADLEQDPR----FFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~--~vi~~~r~~--~~~~~~~~~~~----~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      |++|.+|..++..|+..|.  +|++++++.  +.++....+..    ......+++...+.    +    ....-|++|.
T Consensus         7 GatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~----~----~l~~aDiVii   78 (309)
T cd05294           7 GASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDL----S----DVAGSDIVII   78 (309)
T ss_pred             CCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCH----H----HhCCCCEEEE
Confidence            6789999999999999986  599999954  33222111100    00000111111111    1    1246799999


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccc
Q 042185           73 NAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVT  127 (162)
Q Consensus        73 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~  127 (162)
                      ++|....   ...+.   ...++.|+.-...+.+.+.+.   ...+.++++++..
T Consensus        79 tag~p~~---~~~~r---~dl~~~n~~i~~~~~~~i~~~---~~~~~viv~~npv  124 (309)
T cd05294          79 TAGVPRK---EGMSR---LDLAKKNAKIVKKYAKQIAEF---APDTKILVVTNPV  124 (309)
T ss_pred             ecCCCCC---CCCCH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCch
Confidence            9997322   12332   233344444333333333221   2456788787643

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=94.63  E-value=0.2  Score=36.51  Aligned_cols=72  Identities=22%  Similarity=0.185  Sum_probs=45.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+++++|.+++..+...|++|+.++++.++.+.+.......+  .|....+..+.+.... . ...+|.++++.|.
T Consensus       152 g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~-~-~~~~d~vi~~~~~  223 (328)
T cd08268         152 AASSSVGLAAIQIANAAGATVIATTRTSEKRDALLALGAAHV--IVTDEEDLVAEVLRIT-G-GKGVDVVFDPVGG  223 (328)
T ss_pred             cCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEE--EecCCccHHHHHHHHh-C-CCCceEEEECCch
Confidence            678999999999999999999999998877666533221122  2322222222222221 1 1259999998774

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=94.60  E-value=0.058  Score=37.47  Aligned_cols=62  Identities=21%  Similarity=0.310  Sum_probs=41.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhh-HHhhhc----------------CCceeEEEeccCChHHHHHHHHHHHHH
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKAT-MADLEQ----------------DPRFFVQELDVLSEQSVQNVLSNVLEK   63 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~-~~~~~~----------------~~~~~~~~~D~~~~~~i~~~~~~~~~~   63 (162)
                      ||.|-||.+++.+|+..|++|++.+|+.++ .+.+.+                ...+.++.+-   ++.+..+..++.+.
T Consensus         7 ~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP---~~a~~~v~~~l~~~   83 (211)
T COG2085           7 IGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVP---FEAIPDVLAELRDA   83 (211)
T ss_pred             eccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEecc---HHHHHhHHHHHHHH
Confidence            588999999999999999999999776554 332222                1233333332   35566777777766


Q ss_pred             cC
Q 042185           64 FG   65 (162)
Q Consensus        64 ~~   65 (162)
                      ++
T Consensus        84 ~~   85 (211)
T COG2085          84 LG   85 (211)
T ss_pred             hC
Confidence            54

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=94.55  E-value=0.36  Score=35.35  Aligned_cols=33  Identities=15%  Similarity=0.362  Sum_probs=28.4

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADL   34 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~   34 (162)
                      |.|.+|..++..|++.|++|++.+|+++..+.+
T Consensus         9 G~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~   41 (296)
T PRK11559          9 GLGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEV   41 (296)
T ss_pred             ccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHH
Confidence            467899999999999999999999998766544

>PLN02350 phosphogluconate dehydrogenase (decarboxylating)

Probab=94.52  E-value=0.31  Score=38.56  Aligned_cols=73  Identities=12%  Similarity=0.150  Sum_probs=50.6

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----C---------------C--ceeEEEeccCChHHHHHHHHH
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----D---------------P--RFFVQELDVLSEQSVQNVLSN   59 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~---------------~--~~~~~~~D~~~~~~i~~~~~~   59 (162)
                      |-|-+|..+|+.|+++|++|.+.+|+.++.+++.+     .               .  +...+-.=+.+.+.++.+++.
T Consensus        13 GLG~MG~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~~~a~s~~e~v~~l~~~dvIi~~v~~~~aV~~Vi~g   92 (493)
T PLN02350         13 GLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPLYGFKDPEDFVLSIQKPRSVIILVKAGAPVDQTIKA   92 (493)
T ss_pred             eeHHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCCcccccCCCHHHHHhcCCCCCEEEEECCCcHHHHHHHHH
Confidence            34678999999999999999999999876654322     0               0  133334446777788888877


Q ss_pred             HHHHcCCccEEEECC
Q 042185           60 VLEKFGKIDVLVNNA   74 (162)
Q Consensus        60 ~~~~~~~id~vi~~a   74 (162)
                      +.....+=|++|.+.
T Consensus        93 l~~~l~~G~iiID~s  107 (493)
T PLN02350         93 LSEYMEPGDCIIDGG  107 (493)
T ss_pred             HHhhcCCCCEEEECC
Confidence            766554456666554

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=94.51  E-value=0.31  Score=35.82  Aligned_cols=34  Identities=12%  Similarity=0.191  Sum_probs=29.5

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLE   35 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~   35 (162)
                      |.|-+|.+++..|+++|++|++.+|++++.+++.
T Consensus         8 GlG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~   41 (296)
T PRK15461          8 GLGQMGSPMASNLLKQGHQLQVFDVNPQAVDALV   41 (296)
T ss_pred             eeCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH
Confidence            4678999999999999999999999988776553

>PRK14901 16S rRNA methyltransferase B; Provisional

Probab=94.50  E-value=0.56  Score=36.51  Aligned_cols=110  Identities=15%  Similarity=0.218  Sum_probs=60.2

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC------CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |+|+....++..+-.. .+|+.++.+.+.++.++..      .++.++..|.++.....      ....+.+|.|+..+.
T Consensus       262 g~G~kt~~la~~~~~~-g~v~a~D~~~~rl~~~~~n~~r~g~~~v~~~~~D~~~~~~~~------~~~~~~fD~Vl~DaP  334 (434)
T PRK14901        262 APGGKTTHIAELMGDQ-GEIWAVDRSASRLKKLQENAQRLGLKSIKILAADSRNLLELK------PQWRGYFDRILLDAP  334 (434)
T ss_pred             CCchhHHHHHHHhCCC-ceEEEEcCCHHHHHHHHHHHHHcCCCeEEEEeCChhhccccc------ccccccCCEEEEeCC
Confidence            5677777777754433 4899999998877766442      24667777765432110      001146899988664


Q ss_pred             CCCCCCCCCC-------ChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEec
Q 042185           76 VQCVGPLAEV-------PLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG  124 (162)
Q Consensus        76 ~~~~~~~~~~-------~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~is  124 (162)
                      -...+.+...       +.++++...    .-...++..+...+  +++|.+|+.+
T Consensus       335 CSg~G~~~r~p~~~~~~~~~~~~~l~----~~Q~~iL~~a~~~l--kpgG~lvyst  384 (434)
T PRK14901        335 CSGLGTLHRHPDARWRQTPEKIQELA----PLQAELLESLAPLL--KPGGTLVYAT  384 (434)
T ss_pred             CCcccccccCcchhhhCCHHHHHHHH----HHHHHHHHHHHHhc--CCCCEEEEEe
Confidence            3222222222       222222221    11234555555555  4578999865

>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]

Probab=94.43  E-value=0.48  Score=33.85  Aligned_cols=68  Identities=16%  Similarity=0.307  Sum_probs=48.3

Q ss_pred             CCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC-----------------CceeEEEeccCChHHHHHHHHHHHHHcC
Q 042185            3 QGGIGHALARAFAASDCRVVATGRSKATMADLEQD-----------------PRFFVQELDVLSEQSVQNVLSNVLEKFG   65 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~-----------------~~~~~~~~D~~~~~~i~~~~~~~~~~~~   65 (162)
                      -|-+|..++++|..+|+.|+..|+|++..+++..+                 .+..|+-+--.+  -..++++++...+.
T Consensus         8 LGrMG~n~v~rl~~~ghdvV~yD~n~~av~~~~~~ga~~a~sl~el~~~L~~pr~vWlMvPag~--it~~vi~~la~~L~   85 (300)
T COG1023           8 LGRMGANLVRRLLDGGHDVVGYDVNQTAVEELKDEGATGAASLDELVAKLSAPRIVWLMVPAGD--ITDAVIDDLAPLLS   85 (300)
T ss_pred             cchhhHHHHHHHHhCCCeEEEEcCCHHHHHHHHhcCCccccCHHHHHHhcCCCcEEEEEccCCC--chHHHHHHHHhhcC
Confidence            46689999999999999999999998877766442                 455555544433  23556777766666


Q ss_pred             CccEEEE
Q 042185           66 KIDVLVN   72 (162)
Q Consensus        66 ~id~vi~   72 (162)
                      .=|+||-
T Consensus        86 ~GDivID   92 (300)
T COG1023          86 AGDIVID   92 (300)
T ss_pred             CCCEEEE
Confidence            6677763

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.37  E-value=0.84  Score=35.95  Aligned_cols=65  Identities=14%  Similarity=0.207  Sum_probs=42.3

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      |.|+.|+++++.|.++|+.|.+.|++.....+..++..+.+...+ .+.+       .    +...|.||..+|+..
T Consensus        22 G~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~-~~~~-------~----~~~~d~vV~Spgi~~   86 (473)
T PRK00141         22 GAGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTA-EASD-------Q----LDSFSLVVTSPGWRP   86 (473)
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCC-Cchh-------H----hcCCCEEEeCCCCCC
Confidence            578999999999999999999999876544332222233333210 0111       1    135799999999854

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=94.36  E-value=0.26  Score=38.42  Aligned_cols=106  Identities=16%  Similarity=0.214  Sum_probs=61.9

Q ss_pred             CCCCchHHHHHHHHHHC-------CC--eEEEEecChhhHHhhhcC---Cc-eeEEEeccCChHHHHHHHHHHHHHcCCc
Q 042185            1 CSQGGIGHALARAFAAS-------DC--RVVATGRSKATMADLEQD---PR-FFVQELDVLSEQSVQNVLSNVLEKFGKI   67 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~-------g~--~vi~~~r~~~~~~~~~~~---~~-~~~~~~D~~~~~~i~~~~~~~~~~~~~i   67 (162)
                      |++|.+|.+++..|+..       |.  ++++++++.+.++...-+   .. .....+.++..+         .+.+..-
T Consensus       107 GAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~~---------ye~~kda  177 (444)
T PLN00112        107 GAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGIDP---------YEVFQDA  177 (444)
T ss_pred             CCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecCC---------HHHhCcC
Confidence            66789999999999988       64  799999998765543211   00 000011111100         2233477


Q ss_pred             cEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhh--cCCCeEEEecc
Q 042185           68 DVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY--RKKGKIINVGS  125 (162)
Q Consensus        68 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~iv~isS  125 (162)
                      |++|..+|... .+  .++.   ...++.|..    +++...+.+.+  ..++.+|++|-
T Consensus       178 DiVVitAG~pr-kp--G~tR---~dLl~~N~~----I~k~i~~~I~~~a~p~~ivIVVsN  227 (444)
T PLN00112        178 EWALLIGAKPR-GP--GMER---ADLLDINGQ----IFAEQGKALNEVASRNVKVIVVGN  227 (444)
T ss_pred             CEEEECCCCCC-CC--CCCH---HHHHHHHHH----HHHHHHHHHHHhcCCCeEEEEcCC
Confidence            99999999742 22  2333   334455554    55666666655  45677777774

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=94.33  E-value=0.19  Score=37.61  Aligned_cols=70  Identities=17%  Similarity=0.226  Sum_probs=50.1

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcC-CccEEEECCCC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFG-KIDVLVNNAGV   76 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~-~id~vi~~ag~   76 (162)
                      |.||+|.+.+.-....|+ +++.+|.++++++.+..-...+++.     +.+...+.+.+.+..+ ..|+.|.+.|.
T Consensus       193 GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn-----~~~~~~vv~~i~~~T~gG~d~~~e~~G~  264 (366)
T COG1062         193 GLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVN-----PKEVDDVVEAIVELTDGGADYAFECVGN  264 (366)
T ss_pred             eccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeec-----chhhhhHHHHHHHhcCCCCCEEEEccCC
Confidence            468999999999999998 7999999999988776544444442     2222234444444444 79999999985

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=94.29  E-value=0.88  Score=34.91  Aligned_cols=72  Identities=17%  Similarity=0.225  Sum_probs=43.8

Q ss_pred             CCCchHHHHHHHHHHCCCeE-EEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            2 SQGGIGHALARAFAASDCRV-VATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~v-i~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      |+|+||..++..+...|+++ +.++++.++++.+.+- ...  .++....+++...+.++.. ...+|++|.+.|..
T Consensus       193 G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~-Ga~--~v~~~~~~~~~~~v~~~~~-~~g~Dvvid~~G~~  265 (393)
T TIGR02819       193 GAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSF-GCE--TVDLSKDATLPEQIEQILG-EPEVDCAVDCVGFE  265 (393)
T ss_pred             CCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHc-CCe--EEecCCcccHHHHHHHHcC-CCCCcEEEECCCCc
Confidence            57899999988888889975 4456776666655542 233  2343332233333333221 12589999999963

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=94.27  E-value=0.057  Score=39.41  Aligned_cols=71  Identities=14%  Similarity=0.215  Sum_probs=48.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC----CceeEEEeccCChHHHH-HHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD----PRFFVQELDVLSEQSVQ-NVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~i~-~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|+.|.++.+.....|++-+.+.|+.+..+++...    +.-+++    | ++++. .-........+++..-+||.|
T Consensus       168 ganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~Vi----T-eeel~~~~~~k~~~~~~~prLalNcVG  242 (354)
T KOG0025|consen  168 GANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVI----T-EEELRDRKMKKFKGDNPRPRLALNCVG  242 (354)
T ss_pred             CcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEe----c-HHHhcchhhhhhhccCCCceEEEeccC
Confidence            7899999999888888899999999998877776553    222222    2 22222 112222335678899999998


Q ss_pred             C
Q 042185           76 V   76 (162)
Q Consensus        76 ~   76 (162)
                      .
T Consensus       243 G  243 (354)
T KOG0025|consen  243 G  243 (354)
T ss_pred             c
Confidence            6

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=94.26  E-value=0.37  Score=35.45  Aligned_cols=27  Identities=22%  Similarity=0.388  Sum_probs=24.3

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecCh
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSK   28 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~   28 (162)
                      |.||+|.++++.|+..|. ++.++|.+.
T Consensus         6 GaGGlG~eilknLal~Gvg~I~IvD~D~   33 (291)
T cd01488           6 GAGGLGCELLKNLALSGFRNIHVIDMDT   33 (291)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEECCCE
Confidence            688999999999999998 899998864

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=94.24  E-value=0.16  Score=35.99  Aligned_cols=62  Identities=15%  Similarity=0.093  Sum_probs=40.8

Q ss_pred             HHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            9 ALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         9 ~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      .+++.+++.|++|..+|-+++.++.++....-..+.+|-     ....++++.+..+++|+|++.--
T Consensus        72 ~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y-----~~~~~edl~~~~~~FDvV~cmEV  133 (243)
T COG2227          72 ILSEPLARLGASVTGIDASEKPIEVAKLHALESGVNIDY-----RQATVEDLASAGGQFDVVTCMEV  133 (243)
T ss_pred             HhhHHHHHCCCeeEEecCChHHHHHHHHhhhhccccccc-----hhhhHHHHHhcCCCccEEEEhhH
Confidence            789999999999999999988777665432222222222     12234444444478898887654

>PRK12491 pyrroline-5-carboxylate reductase; Reviewed

Probab=94.19  E-value=0.79  Score=33.35  Aligned_cols=75  Identities=9%  Similarity=0.224  Sum_probs=46.8

Q ss_pred             CCCchHHHHHHHHHHCCC----eEEEEecChhhHHhhhcCCceeE--------EEecc----CChHHHHHHHHHHHHHcC
Q 042185            2 SQGGIGHALARAFAASDC----RVVATGRSKATMADLEQDPRFFV--------QELDV----LSEQSVQNVLSNVLEKFG   65 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~----~vi~~~r~~~~~~~~~~~~~~~~--------~~~D~----~~~~~i~~~~~~~~~~~~   65 (162)
                      |.|-+|.++++.|.+.|+    +|++.+|+.++++.+.++..+..        -.+|+    ..+++++.+++++...+.
T Consensus         9 G~G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~~~~~~~~e~~~~aDiIiLavkP~~~~~vl~~l~~~~~   88 (272)
T PRK12491          9 GCGNMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGITITTNNNEVANSADILILSIKPDLYSSVINQIKDQIK   88 (272)
T ss_pred             CccHHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCcEEeCCcHHHHhhCCEEEEEeChHHHHHHHHHHHHhhc
Confidence            578899999999999874    68999999887766543111110        11222    225678888888765442


Q ss_pred             CccEEEECCCC
Q 042185           66 KIDVLVNNAGV   76 (162)
Q Consensus        66 ~id~vi~~ag~   76 (162)
                      +=.++|..++.
T Consensus        89 ~~~lvISi~AG   99 (272)
T PRK12491         89 NDVIVVTIAAG   99 (272)
T ss_pred             CCcEEEEeCCC
Confidence            22356655543

>PTZ00142 6-phosphogluconate dehydrogenase; Provisional

Probab=94.18  E-value=0.45  Score=37.48  Aligned_cols=73  Identities=15%  Similarity=0.232  Sum_probs=49.2

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC----C-----------------ceeEEEeccCChHHHHHHHHHH
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD----P-----------------RFFVQELDVLSEQSVQNVLSNV   60 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~----~-----------------~~~~~~~D~~~~~~i~~~~~~~   60 (162)
                      |.|-+|.++|..|+++|++|.+.+|+++..+++.+.    .                 ....+-+=+.+.+.++.+++++
T Consensus         8 GLG~MG~~lA~nL~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~~~s~~e~v~~l~~~d~Iil~v~~~~~v~~vi~~l   87 (470)
T PTZ00142          8 GLAVMGQNLALNIASRGFKISVYNRTYEKTEEFVKKAKEGNTRVKGYHTLEELVNSLKKPRKVILLIKAGEAVDETIDNL   87 (470)
T ss_pred             eEhHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhhhhcCCcceecCCHHHHHhcCCCCCEEEEEeCChHHHHHHHHHH
Confidence            456799999999999999999999998876554321    0                 1122223345666788888777


Q ss_pred             HHHcCCccEEEECC
Q 042185           61 LEKFGKIDVLVNNA   74 (162)
Q Consensus        61 ~~~~~~id~vi~~a   74 (162)
                      .....+=|++|.+.
T Consensus        88 ~~~L~~g~iIID~g  101 (470)
T PTZ00142         88 LPLLEKGDIIIDGG  101 (470)
T ss_pred             HhhCCCCCEEEECC
Confidence            66544445666554

>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein

Probab=94.16  E-value=1.8  Score=32.42  Aligned_cols=58  Identities=17%  Similarity=0.198  Sum_probs=37.2

Q ss_pred             HHHHHHHHHHCCCeEEEEecChhhHH-----hhhcC------------CceeEEEeccCChHHHHHHHHHHHHHc
Q 042185            7 GHALARAFAASDCRVVATGRSKATMA-----DLEQD------------PRFFVQELDVLSEQSVQNVLSNVLEKF   64 (162)
Q Consensus         7 G~~ia~~l~~~g~~vi~~~r~~~~~~-----~~~~~------------~~~~~~~~D~~~~~~i~~~~~~~~~~~   64 (162)
                      |.++|..|++.|+.|++.+|+.+..+     .+.+.            ....++-.=+.+.++++.+++.+....
T Consensus        32 GspMArnLlkAGheV~V~Drnrsa~e~e~~e~LaeaGA~~AaS~aEAAa~ADVVIL~LPd~aaV~eVl~GLaa~L  106 (341)
T TIGR01724        32 GSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDAGVKVVSDDKEAAKHGEIHVLFTPFGKGTFSIARTIIEHV  106 (341)
T ss_pred             HHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHCCCeecCCHHHHHhCCCEEEEecCCHHHHHHHHHHHHhcC
Confidence            78999999999999999998865332     12111            123344444556667777766555443

This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=94.15  E-value=1.1  Score=33.63  Aligned_cols=72  Identities=18%  Similarity=0.201  Sum_probs=43.0

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhH----------HhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEE
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATM----------ADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLV   71 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~----------~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi   71 (162)
                      |.|.||+++|+.|...|++|+..+++.+..          +++..+..+.++.+-.+.. ....+.+...+.. +.+.++
T Consensus       153 G~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~~-t~~li~~~~l~~m-k~gavl  230 (330)
T PRK12480        153 GTGRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKE-SYHLFDKAMFDHV-KKGAIL  230 (330)
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcHH-HHHHHhHHHHhcC-CCCcEE
Confidence            578899999999999999999999876432          2222234455555554432 1222223333332 445555


Q ss_pred             ECCC
Q 042185           72 NNAG   75 (162)
Q Consensus        72 ~~ag   75 (162)
                      .|++
T Consensus       231 IN~a  234 (330)
T PRK12480        231 VNAA  234 (330)
T ss_pred             EEcC
Confidence            5555

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=94.14  E-value=0.31  Score=35.51  Aligned_cols=71  Identities=23%  Similarity=0.214  Sum_probs=44.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |+++++|.++...+...|++|+.+.++.++.+.+.. ..... ..+..+.+....+.... . ...+|.+++++|
T Consensus       147 g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~-~-~~~~d~~i~~~~  217 (325)
T TIGR02824       147 GGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACEA-LGADI-AINYREEDFVEVVKAET-G-GKGVDVILDIVG  217 (325)
T ss_pred             cCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcE-EEecCchhHHHHHHHHc-C-CCCeEEEEECCc
Confidence            578999999999888999999999998877665432 22211 12333332222222211 1 125999999877

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>KOG0409 consensus Predicted dehydrogenase [General function prediction only]

Probab=94.10  E-value=0.19  Score=36.90  Aligned_cols=34  Identities=18%  Similarity=0.403  Sum_probs=29.2

Q ss_pred             CCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc
Q 042185            3 QGGIGHALARAFAASDCRVVATGRSKATMADLEQ   36 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~   36 (162)
                      -|-+|.++|.+|.+.|++|++.+|+.+..++.++
T Consensus        43 LG~MG~~M~~nLik~G~kVtV~dr~~~k~~~f~~   76 (327)
T KOG0409|consen   43 LGNMGSAMVSNLIKAGYKVTVYDRTKDKCKEFQE   76 (327)
T ss_pred             eccchHHHHHHHHHcCCEEEEEeCcHHHHHHHHH
Confidence            4678999999999999999999999887766544

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.08  E-value=0.071  Score=41.38  Aligned_cols=25  Identities=16%  Similarity=0.126  Sum_probs=22.6

Q ss_pred             CchHHHHHHHHHHCCCeEEEEecCh
Q 042185            4 GGIGHALARAFAASDCRVVATGRSK   28 (162)
Q Consensus         4 ~giG~~ia~~l~~~g~~vi~~~r~~   28 (162)
                      |++|.++++.|+++|++|++.+++.
T Consensus        14 g~~G~s~a~~l~~~G~~V~~~d~~~   38 (447)
T PRK02472         14 AKSGYAAAKLLHKLGANVTVNDGKP   38 (447)
T ss_pred             CHHHHHHHHHHHHCCCEEEEEcCCC
Confidence            4599999999999999999999864

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=94.06  E-value=0.3  Score=35.78  Aligned_cols=72  Identities=21%  Similarity=0.233  Sum_probs=46.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+++++|..++..+...|++|+.++++.++.+.+.. ..... ..|..+.+..+.+....  ....+|.++.+.|.
T Consensus       150 g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~--~~~~~d~vl~~~g~  221 (324)
T cd08244         150 AAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRA-LGADV-AVDYTRPDWPDQVREAL--GGGGVTVVLDGVGG  221 (324)
T ss_pred             cCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCCE-EEecCCccHHHHHHHHc--CCCCceEEEECCCh
Confidence            678999999988888999999999998887766643 22221 23433333233322211  11258999998763

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK07411 hypothetical protein; Validated

Probab=94.04  E-value=0.38  Score=36.94  Aligned_cols=26  Identities=27%  Similarity=0.380  Sum_probs=23.9

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRS   27 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~   27 (162)
                      |.||+|.++++.|+..|. ++.++|.+
T Consensus        45 G~GGlG~~va~~La~~Gvg~l~lvD~D   71 (390)
T PRK07411         45 GTGGLGSPLLLYLAAAGIGRIGIVDFD   71 (390)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            678999999999999998 89999875

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=94.04  E-value=0.42  Score=35.88  Aligned_cols=73  Identities=15%  Similarity=0.175  Sum_probs=42.9

Q ss_pred             CCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            3 QGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      +|++|..++..+...|+ +|+.++++.++.+.+..-.--.++..+-.+..++...+.+... ...+|+++.+.|.
T Consensus       186 ~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~-~~~~d~vid~~g~  259 (361)
T cd08231         186 AGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRRAIVRDITG-GRGADVVIEASGH  259 (361)
T ss_pred             CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHHHHHHHHhC-CCCCcEEEECCCC
Confidence            58999999988888899 9999998887766554322112221111111112222222211 1368999998874

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PLN02740 Alcohol dehydrogenase-like

Probab=94.03  E-value=0.38  Score=36.56  Aligned_cols=70  Identities=14%  Similarity=0.200  Sum_probs=45.8

Q ss_pred             CCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCCh-HHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            3 QGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSE-QSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      .|++|...+..+...|+ +|+.++++.++++.+..-..-.+  +|..+. +++...+.++..  +.+|++|.++|.
T Consensus       207 ~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~--i~~~~~~~~~~~~v~~~~~--~g~dvvid~~G~  278 (381)
T PLN02740        207 LGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDF--INPKDSDKPVHERIREMTG--GGVDYSFECAGN  278 (381)
T ss_pred             CCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEE--EecccccchHHHHHHHHhC--CCCCEEEECCCC
Confidence            58999999888888899 69999999888777654222222  243332 123333333322  269999999984

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.01  E-value=1.1  Score=35.33  Aligned_cols=65  Identities=18%  Similarity=0.063  Sum_probs=40.7

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChh-hHHhh---hcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKA-TMADL---EQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~-~~~~~---~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      |.|++|.++|..|.++|+.|.+++++.+ .....   ..+..+.+...+-..             .....|.||..+|+.
T Consensus        23 G~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-------------~~~~~D~Vv~s~Gi~   89 (480)
T PRK01438         23 GLGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT-------------LPEDTDLVVTSPGWR   89 (480)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-------------ccCCCCEEEECCCcC
Confidence            5688999999999999999999986542 11111   112233333322111             113679999999985


Q ss_pred             CC
Q 042185           78 CV   79 (162)
Q Consensus        78 ~~   79 (162)
                      +.
T Consensus        90 ~~   91 (480)
T PRK01438         90 PD   91 (480)
T ss_pred             CC
Confidence            44

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=94.00  E-value=0.14  Score=38.85  Aligned_cols=59  Identities=15%  Similarity=0.206  Sum_probs=49.5

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChH-HHHHHHHHH
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQ-SVQNVLSNV   60 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~i~~~~~~~   60 (162)
                      |+|.+...++..|++++- +|++.+|.....+++....++..+.+|+++++ .+++.+.+.
T Consensus         9 gsg~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~~~~~~av~ldv~~~~~~L~~~v~~~   69 (445)
T KOG0172|consen    9 GSGFVSRPVADFLSRKKDVNVTVASRTLKDAEALVKGINIKAVSLDVADEELALRKEVKPL   69 (445)
T ss_pred             cCccccchHHHHHhhcCCceEEEehhhHHHHHHHhcCCCccceEEEccchHHHHHhhhccc
Confidence            678899999999998865 89999999998888888888999999999987 565555443

>PRK08328 hypothetical protein; Provisional

Probab=93.98  E-value=0.29  Score=34.69  Aligned_cols=33  Identities=24%  Similarity=0.493  Sum_probs=27.1

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhh
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADL   34 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~   34 (162)
                      |.||+|.++++.|+..|. ++.++|.+.-....+
T Consensus        34 G~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL   67 (231)
T PRK08328         34 GVGGLGSPVAYYLAAAGVGRILLIDEQTPELSNL   67 (231)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCccChhhh
Confidence            678999999999999998 799999875444333

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=93.97  E-value=0.44  Score=34.97  Aligned_cols=72  Identities=21%  Similarity=0.151  Sum_probs=45.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+++++|.+++......|++++.+.++.++.+.+.....-.++  +..+. +....+..... ...+|.++.+.|.
T Consensus       147 g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~--~~~~~-~~~~~i~~~~~-~~~~d~v~d~~g~  218 (324)
T cd08292         147 AAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVV--STEQP-GWQDKVREAAG-GAPISVALDSVGG  218 (324)
T ss_pred             ccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEE--cCCCc-hHHHHHHHHhC-CCCCcEEEECCCC
Confidence            6788999999998888999999998888776666543211222  22222 22222222211 1258999988774

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PF13649 Methyltransf_25: Methyltransferase domain; PDB: 3BXO_B 3GGD_A 3PX2_A 3PX3_A 3PFH_D 3PFG_A 1Y8C_A

Probab=93.95  E-value=0.53  Score=28.40  Aligned_cols=77  Identities=22%  Similarity=0.286  Sum_probs=48.2

Q ss_pred             CCCchHHHHHHHHHHCC--CeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            2 SQGGIGHALARAFAASD--CRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g--~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      |+|.....++..+ ..|  .+++.+|.+++.++.+++     ..++.++..|+.+..          ...++.|+|+.+-
T Consensus         7 G~G~~~~~l~~~~-~~~~~~~~~gvD~s~~~l~~~~~~~~~~~~~~~~~~~D~~~l~----------~~~~~~D~v~~~~   75 (101)
T PF13649_consen    7 GTGRVTRALARRF-DAGPSSRVIGVDISPEMLELAKKRFSEDGPKVRFVQADARDLP----------FSDGKFDLVVCSG   75 (101)
T ss_dssp             TTSHHHHHHHHHS------SEEEEEES-HHHHHHHHHHSHHTTTTSEEEESCTTCHH----------HHSSSEEEEEE-T
T ss_pred             CCcHHHHHHHHHh-hhcccceEEEEECCHHHHHHHHHhchhcCCceEEEECCHhHCc----------ccCCCeeEEEEcC
Confidence            4455566666666 556  799999999988776644     247889999997742          2345899999854


Q ss_pred             CCCCCCCCCCCChHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTF   94 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~   94 (162)
                      ..     +...+.++++..+
T Consensus        76 ~~-----~~~~~~~~~~~ll   90 (101)
T PF13649_consen   76 LS-----LHHLSPEELEALL   90 (101)
T ss_dssp             TG-----GGGSSHHHHHHHH
T ss_pred             Cc-----cCCCCHHHHHHHH
Confidence            42     1124556665554

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=93.94  E-value=0.72  Score=30.85  Aligned_cols=33  Identities=24%  Similarity=0.320  Sum_probs=26.1

Q ss_pred             CCchHHHHHHHHHHCCCeEEEEecChhhHHhhh
Q 042185            3 QGGIGHALARAFAASDCRVVATGRSKATMADLE   35 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~   35 (162)
                      =|.+|+.+|+.|...|++|+++..++-+..++.
T Consensus        31 YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~   63 (162)
T PF00670_consen   31 YGKVGKGIARALRGLGARVTVTEIDPIRALQAA   63 (162)
T ss_dssp             -SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH
T ss_pred             CCcccHHHHHHHhhCCCEEEEEECChHHHHHhh
Confidence            367999999999999999999999987665554

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=93.94  E-value=0.54  Score=37.07  Aligned_cols=37  Identities=19%  Similarity=0.176  Sum_probs=32.1

Q ss_pred             CCCchHHHHHHHHHHCC--CeEEEEecChhhHHhhhcCC
Q 042185            2 SQGGIGHALARAFAASD--CRVVATGRSKATMADLEQDP   38 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g--~~vi~~~r~~~~~~~~~~~~   38 (162)
                      |.|.+|..++..|+++|  ++|+.++.++++.+.+..+.
T Consensus         8 G~GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~   46 (473)
T PLN02353          8 GAGYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQ   46 (473)
T ss_pred             CCCHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCC
Confidence            57899999999999884  78999999999988886653

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=93.93  E-value=0.25  Score=33.44  Aligned_cols=27  Identities=22%  Similarity=0.314  Sum_probs=24.7

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecCh
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSK   28 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~   28 (162)
                      |.||+|..+++.|+..|. ++.++|.+.
T Consensus         6 G~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           6 GAGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            578999999999999998 799999975

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=93.90  E-value=1.9  Score=33.10  Aligned_cols=35  Identities=23%  Similarity=0.204  Sum_probs=29.4

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD   37 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~   37 (162)
                      |.|-+|..+|..|+ .|++|+.+++++++.+++.+.
T Consensus         7 GlGyvGl~~A~~lA-~G~~VigvD~d~~kv~~l~~g   41 (388)
T PRK15057          7 GTGYVGLSNGLLIA-QNHEVVALDILPSRVAMLNDR   41 (388)
T ss_pred             CCCHHHHHHHHHHH-hCCcEEEEECCHHHHHHHHcC
Confidence            56789999997777 499999999999998877653

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=93.90  E-value=0.43  Score=35.18  Aligned_cols=70  Identities=20%  Similarity=0.280  Sum_probs=44.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |+++++|.+++......|++|+.+.++.++.+.+..-. ...+ ++..+. +....+.....  ..+|.++++.|
T Consensus       147 ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g-~~~v-~~~~~~-~~~~~~~~~~~--~~vd~v~~~~g  216 (329)
T cd08250         147 AAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLG-CDRP-INYKTE-DLGEVLKKEYP--KGVDVVYESVG  216 (329)
T ss_pred             eCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcC-CceE-EeCCCc-cHHHHHHHhcC--CCCeEEEECCc
Confidence            67899999988888888999999998887766654322 2111 233222 23333333221  35899998876

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=93.89  E-value=0.097  Score=34.71  Aligned_cols=35  Identities=26%  Similarity=0.432  Sum_probs=30.7

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ   36 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~   36 (162)
                      |+|..|.++|..|+.+|.+|.+.+|+++..+.+..
T Consensus         6 GaG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~   40 (157)
T PF01210_consen    6 GAGNWGTALAALLADNGHEVTLWGRDEEQIEEINE   40 (157)
T ss_dssp             SSSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHH
Confidence            57899999999999999999999999887766543

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=93.88  E-value=0.11  Score=34.41  Aligned_cols=32  Identities=25%  Similarity=0.291  Sum_probs=26.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhh
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADL   34 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~   34 (162)
                      |+.+-+|+++|..|+++|.+|++.  +.+..+.+
T Consensus         5 G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~l   36 (164)
T PF12076_consen    5 GNTSKVARAIALALCRRGVQVVML--SKERYESL   36 (164)
T ss_pred             ccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHH
Confidence            778999999999999999999999  44444444

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=93.88  E-value=0.39  Score=36.47  Aligned_cols=65  Identities=18%  Similarity=0.207  Sum_probs=44.8

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      |+|-+|+.++..+.+.|++|+.++.++......   ..-.++..|..|.+.+..+.++.     ++|.|+...
T Consensus         6 G~g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~---~ad~~~~~~~~d~~~l~~~~~~~-----~id~v~~~~   70 (380)
T TIGR01142         6 GSGELGKEVAIEAQRLGVEVIAVDRYANAPAMQ---VAHRSYVINMLDGDALRAVIERE-----KPDYIVPEI   70 (380)
T ss_pred             CCCHHHHHHHHHHHHcCCEEEEEeCCCCCchhh---hCceEEEcCCCCHHHHHHHHHHh-----CCCEEEecc
Confidence            467789999999999999999999976432211   11234456777877776665543     689887543

This enzyme is an alternative to PurN (TIGR00639)

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=93.86  E-value=1.1  Score=33.19  Aligned_cols=71  Identities=23%  Similarity=0.341  Sum_probs=46.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcC-CccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFG-KIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~-~id~vi~~ag~   76 (162)
                      +|+|..|.-+..----+|++|+.+.-..++.+-+.++..+... .|-..+ ++.+.+++   ..+ .||+.|-|.|.
T Consensus       158 aAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~-idyk~~-d~~~~L~~---a~P~GIDvyfeNVGg  229 (340)
T COG2130         158 AAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAG-IDYKAE-DFAQALKE---ACPKGIDVYFENVGG  229 (340)
T ss_pred             ecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCcee-eecCcc-cHHHHHHH---HCCCCeEEEEEcCCc
Confidence            5788888765554446799999999999988877664433322 243333 33333333   333 69999999995

>PRK14902 16S rRNA methyltransferase B; Provisional

Probab=93.85  E-value=1.2  Score=34.74  Aligned_cols=107  Identities=16%  Similarity=0.227  Sum_probs=59.6

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC------CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |+|+....+++.+.. +.+|+.++.+++.++.++..      ..+.++..|..+..      ....   +.+|.|+.++.
T Consensus       260 G~G~~t~~la~~~~~-~~~v~avDi~~~~l~~~~~n~~~~g~~~v~~~~~D~~~~~------~~~~---~~fD~Vl~D~P  329 (444)
T PRK14902        260 APGGKTTHIAELLKN-TGKVVALDIHEHKLKLIEENAKRLGLTNIETKALDARKVH------EKFA---EKFDKILVDAP  329 (444)
T ss_pred             CCCHHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCCccccc------chhc---ccCCEEEEcCC
Confidence            567777777776532 34999999998876655431      23677777775532      1111   47899998775


Q ss_pred             CCCCCCCCC-------CChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEec
Q 042185           76 VQCVGPLAE-------VPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG  124 (162)
Q Consensus        76 ~~~~~~~~~-------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~is  124 (162)
                      ....+.+..       .+.++....    ..-...+++.+...+  +++|.+|+.+
T Consensus       330 csg~G~~~~~p~~~~~~~~~~~~~l----~~~q~~iL~~a~~~L--kpGG~lvyst  379 (444)
T PRK14902        330 CSGLGVIRRKPDIKYNKTKEDIESL----QEIQLEILESVAQYL--KKGGILVYST  379 (444)
T ss_pred             CCCCeeeccCcchhhcCCHHHHHHH----HHHHHHHHHHHHHHc--CCCCEEEEEc
Confidence            332222111       122222211    112233556666655  4568988753

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=93.84  E-value=0.56  Score=34.47  Aligned_cols=72  Identities=11%  Similarity=0.134  Sum_probs=44.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |+++++|..++..+...|++++++.++.++.+.+.... .. ...+..+.+.....+..... ...+|.++.+.|
T Consensus       148 ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g-~~-~~~~~~~~~~~~~~~~~~~~-~~~~d~~i~~~~  219 (334)
T PTZ00354        148 AGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCKKLA-AI-ILIRYPDEEGFAPKVKKLTG-EKGVNLVLDCVG  219 (334)
T ss_pred             cCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcC-Cc-EEEecCChhHHHHHHHHHhC-CCCceEEEECCc
Confidence            67899999999999999999888888888777664322 21 12233332212222222211 125899998875

>PRK07680 late competence protein ComER; Validated

Probab=93.78  E-value=0.81  Score=33.19  Aligned_cols=75  Identities=19%  Similarity=0.289  Sum_probs=47.3

Q ss_pred             CCCchHHHHHHHHHHCCC----eEEEEecChhhHHhhhcCC-ceeEE--------Eecc----CChHHHHHHHHHHHHHc
Q 042185            2 SQGGIGHALARAFAASDC----RVVATGRSKATMADLEQDP-RFFVQ--------ELDV----LSEQSVQNVLSNVLEKF   64 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~----~vi~~~r~~~~~~~~~~~~-~~~~~--------~~D~----~~~~~i~~~~~~~~~~~   64 (162)
                      |.|.+|.+++..|.+.|.    .|.+.+|+.++.+.+.... .+...        .+|+    ..+.++..+++++...+
T Consensus         7 G~G~mG~ala~~L~~~g~~~~~~v~v~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~aDiVilav~p~~~~~vl~~l~~~l   86 (273)
T PRK07680          7 GTGNMGTILIEAFLESGAVKPSQLTITNRTPAKAYHIKERYPGIHVAKTIEEVISQSDLIFICVKPLDIYPLLQKLAPHL   86 (273)
T ss_pred             CccHHHHHHHHHHHHCCCCCcceEEEECCCHHHHHHHHHHcCCeEEECCHHHHHHhCCEEEEecCHHHHHHHHHHHHhhc
Confidence            478999999999999983    6899999987665543311 11110        1121    23566788888776544


Q ss_pred             CCccEEEECCCC
Q 042185           65 GKIDVLVNNAGV   76 (162)
Q Consensus        65 ~~id~vi~~ag~   76 (162)
                      .+=..++++++.
T Consensus        87 ~~~~~iis~~ag   98 (273)
T PRK07680         87 TDEHCLVSITSP   98 (273)
T ss_pred             CCCCEEEEECCC
Confidence            333467776653

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=93.78  E-value=0.53  Score=34.33  Aligned_cols=68  Identities=22%  Similarity=0.184  Sum_probs=43.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |+++++|.+++......|++|+.+.++.++.+.+.. ..+..+..+  .. +....+.+.   ..++|.++.+.|
T Consensus       150 ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~--~~-~~~~~i~~~---~~~~d~vl~~~~  217 (320)
T cd08243         150 GGTSSVGLAALKLAKALGATVTATTRSPERAALLKE-LGADEVVID--DG-AIAEQLRAA---PGGFDKVLELVG  217 (320)
T ss_pred             cCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCcEEEec--Cc-cHHHHHHHh---CCCceEEEECCC
Confidence            678999999988888999999999988877665533 222222111  21 222222222   246999998876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=93.77  E-value=0.46  Score=36.04  Aligned_cols=70  Identities=20%  Similarity=0.309  Sum_probs=45.0

Q ss_pred             CCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCCh-HHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            3 QGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSE-QSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      .+++|..++..+...|+ +|+.++++.++++.+..-. .. ...+..+. ++....+.+...  +.+|.++.+.|.
T Consensus       199 ~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lG-a~-~~i~~~~~~~~~~~~v~~~~~--~~~d~vld~~g~  270 (373)
T cd08299         199 LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELG-AT-ECINPQDYKKPIQEVLTEMTD--GGVDFSFEVIGR  270 (373)
T ss_pred             CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcC-Cc-eEecccccchhHHHHHHHHhC--CCCeEEEECCCC
Confidence            58999999998889999 7999999988877764422 21 11222221 123333333322  469999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>PRK14851 hypothetical protein; Provisional

Probab=93.76  E-value=0.34  Score=39.88  Aligned_cols=26  Identities=15%  Similarity=0.229  Sum_probs=23.8

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRS   27 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~   27 (162)
                      |.||+|..+++.|+..|. ++.++|.+
T Consensus        50 G~GGlGs~va~~Lar~GVG~l~LvD~D   76 (679)
T PRK14851         50 GMGGVGGVHLITMVRTGIGRFHIADFD   76 (679)
T ss_pred             CcCHHHHHHHHHHHHhCCCeEEEEcCC
Confidence            578999999999999998 89999876

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=93.74  E-value=0.42  Score=36.72  Aligned_cols=26  Identities=19%  Similarity=0.233  Sum_probs=23.8

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRS   27 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~   27 (162)
                      |.||+|..+++.|+..|. ++.++|.+
T Consensus        49 G~GGlGs~va~~La~~Gvg~i~lvD~D   75 (392)
T PRK07878         49 GAGGLGSPTLLYLAAAGVGTLGIVEFD   75 (392)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEECCC
Confidence            678999999999999998 89999875

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=93.73  E-value=0.26  Score=36.61  Aligned_cols=69  Identities=14%  Similarity=0.082  Sum_probs=43.8

Q ss_pred             CCchHHHHHHHHHHCCCe-EEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            3 QGGIGHALARAFAASDCR-VVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      +|++|...+..+...|++ |+.++++.++.+.+.+-. .. ..+|..+.+ .+.+. +... ...+|++|.+.|.
T Consensus       172 ~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~g-a~-~~i~~~~~~-~~~~~-~~~~-~~~~d~vid~~g~  241 (339)
T cd08239         172 AGPVGLGALMLARALGAEDVIGVDPSPERLELAKALG-AD-FVINSGQDD-VQEIR-ELTS-GAGADVAIECSGN  241 (339)
T ss_pred             CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhC-CC-EEEcCCcch-HHHHH-HHhC-CCCCCEEEECCCC
Confidence            489999999888888998 999999888776654322 22 123443333 33322 2111 1268999998874

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=93.72  E-value=0.44  Score=36.64  Aligned_cols=74  Identities=9%  Similarity=-0.019  Sum_probs=43.6

Q ss_pred             CCCCchHHHHHHHHHHCCC---eEEEEecChhhHHhhhcCC-------ceeEEEeccCChHHHHHHHHHHHHHcCCccEE
Q 042185            1 CSQGGIGHALARAFAASDC---RVVATGRSKATMADLEQDP-------RFFVQELDVLSEQSVQNVLSNVLEKFGKIDVL   70 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~---~vi~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~v   70 (162)
                      |++|++|...+..+...|+   +|+.++++.++++.+.+-.       .......|..+.+++.+.+.++.. ...+|.+
T Consensus       183 G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~-g~g~D~v  261 (410)
T cd08238         183 GGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELTG-GQGFDDV  261 (410)
T ss_pred             eCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHhC-CCCCCEE
Confidence            6789999998876666553   7999999988877665421       112122343332233333333221 1258888


Q ss_pred             EECCC
Q 042185           71 VNNAG   75 (162)
Q Consensus        71 i~~ag   75 (162)
                      |.+.|
T Consensus       262 id~~g  266 (410)
T cd08238         262 FVFVP  266 (410)
T ss_pred             EEcCC
Confidence            88776

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PRK09287 6-phosphogluconate dehydrogenase; Validated

Probab=93.70  E-value=0.54  Score=36.91  Aligned_cols=69  Identities=19%  Similarity=0.242  Sum_probs=47.9

Q ss_pred             hHHHHHHHHHHCCCeEEEEecChhhHHhhhcC-C-------------------ceeEEEeccCChHHHHHHHHHHHHHcC
Q 042185            6 IGHALARAFAASDCRVVATGRSKATMADLEQD-P-------------------RFFVQELDVLSEQSVQNVLSNVLEKFG   65 (162)
Q Consensus         6 iG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~-~-------------------~~~~~~~D~~~~~~i~~~~~~~~~~~~   65 (162)
                      +|..+|+.|+++|++|.+.+|+.++.+++... .                   +...+-.=+.+.+.++.+++.+.....
T Consensus         1 MG~~mA~nL~~~G~~V~v~nrt~~~~~~l~~~~g~~~g~~~~~s~~e~v~~l~~~~~Ii~mv~~g~~v~~Vi~~l~~~l~   80 (459)
T PRK09287          1 MGKNLALNIASHGYTVAVYNRTPEKTDEFLAEEGKGKKIVPAYTLEEFVASLEKPRKILLMVKAGAPVDAVIEQLLPLLE   80 (459)
T ss_pred             CcHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhCCCCCeEeeCCHHHHHhhCCCCCEEEEECCCchHHHHHHHHHHhcCC
Confidence            58999999999999999999998876655431 0                   123344446666777888777765544


Q ss_pred             CccEEEECC
Q 042185           66 KIDVLVNNA   74 (162)
Q Consensus        66 ~id~vi~~a   74 (162)
                      +=|++|.+.
T Consensus        81 ~GdiiID~g   89 (459)
T PRK09287         81 KGDIIIDGG   89 (459)
T ss_pred             CCCEEEECC
Confidence            456666543

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=93.67  E-value=0.7  Score=34.17  Aligned_cols=70  Identities=14%  Similarity=0.126  Sum_probs=43.3

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEec--cCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELD--VLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D--~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      |.||+|..+++.|+..|. +++++|.+.-....+..+.  .+-.-|  +... -.+.+.+.+.+..+.+++-.+..
T Consensus         6 GaGGLGs~vA~~La~aGVg~ItlvD~D~Ve~sNL~RQ~--L~~~~D~~iGk~-Ka~aaa~~L~~iNP~v~v~~~~~   78 (307)
T cd01486           6 GAGTLGCNVARNLLGWGVRHITFVDSGKVSYSNPVRQS--LFTFEDCKGGKP-KAEAAAERLKEIFPSIDATGIVL   78 (307)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEECCCEeccccCCccc--ccccchhhcCcc-HHHHHHHHHHHHCCCcEEEEeee
Confidence            678999999999999998 8999998754433332211  111122  3322 34555666666566666654443

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=93.66  E-value=1.2  Score=33.12  Aligned_cols=88  Identities=13%  Similarity=0.201  Sum_probs=50.2

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhh------------HHhhhcCCceeEEEeccCChHHHHHHHH-HHHHHcCCcc
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKAT------------MADLEQDPRFFVQELDVLSEQSVQNVLS-NVLEKFGKID   68 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~------------~~~~~~~~~~~~~~~D~~~~~~i~~~~~-~~~~~~~~id   68 (162)
                      |-|.||+++++.|...|++|+..++..+.            ++++..+..+....+-++.  +.+.+++ +..+.. +.+
T Consensus       143 G~G~IG~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l~~aDvvv~~lPlt~--~T~~li~~~~l~~m-k~g  219 (312)
T PRK15469        143 GAGVLGSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFLSQTRVLINLLPNTP--ETVGIINQQLLEQL-PDG  219 (312)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHHhcCCEEEECCCCCH--HHHHHhHHHHHhcC-CCC
Confidence            56889999999999999999999876432            2222233444444444444  3344443 233333 445


Q ss_pred             EEEECCCCCCCCCCCCCChHHHHHHHHhh
Q 042185           69 VLVNNAGVQCVGPLAEVPLSAMEQTFNTN   97 (162)
Q Consensus        69 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n   97 (162)
                      .++.|.|-.   .+  ++.+.+.+.++.+
T Consensus       220 a~lIN~aRG---~v--Vde~aL~~aL~~g  243 (312)
T PRK15469        220 AYLLNLARG---VH--VVEDDLLAALDSG  243 (312)
T ss_pred             cEEEECCCc---cc--cCHHHHHHHHhcC
Confidence            555555532   22  4555655555443

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=93.60  E-value=0.55  Score=35.54  Aligned_cols=70  Identities=17%  Similarity=0.272  Sum_probs=45.3

Q ss_pred             CCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCC-hHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            3 QGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLS-EQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      +|++|...+......|+ +|+.++++.++++.+.+-.--.+  .|..+ .+++...+.++..  +.+|++|.++|.
T Consensus       194 ~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~--i~~~~~~~~~~~~v~~~~~--~g~d~vid~~G~  265 (368)
T TIGR02818       194 LGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDC--VNPNDYDKPIQEVIVEITD--GGVDYSFECIGN  265 (368)
T ss_pred             CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeE--EcccccchhHHHHHHHHhC--CCCCEEEECCCC
Confidence            58999999888878898 79999999888776644222122  23332 2233333333322  368999999884

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=93.59  E-value=0.88  Score=32.76  Aligned_cols=73  Identities=23%  Similarity=0.297  Sum_probs=46.8

Q ss_pred             CCCchHHHHHHHHHHCC---CeEEEEecChhhHHhhhcCCcee--------EEEecc----CChHHHHHHHHHHHHHcCC
Q 042185            2 SQGGIGHALARAFAASD---CRVVATGRSKATMADLEQDPRFF--------VQELDV----LSEQSVQNVLSNVLEKFGK   66 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g---~~vi~~~r~~~~~~~~~~~~~~~--------~~~~D~----~~~~~i~~~~~~~~~~~~~   66 (162)
                      |.|.||..++..|.+.|   ..|.+.+|+.+..+.+.....+.        .-.+|+    ..+..++.+++++....+ 
T Consensus         9 G~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~~~~~~~~~~~advVil~v~~~~~~~v~~~l~~~~~-   87 (267)
T PRK11880          9 GGGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRAATDNQEAAQEADVVVLAVKPQVMEEVLSELKGQLD-   87 (267)
T ss_pred             echHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCeecCChHHHHhcCCEEEEEcCHHHHHHHHHHHHhhcC-
Confidence            46899999999999998   68999999987665543321110        011221    245567888888765432 


Q ss_pred             ccEEEECCCC
Q 042185           67 IDVLVNNAGV   76 (162)
Q Consensus        67 id~vi~~ag~   76 (162)
                       ..|+++.+.
T Consensus        88 -~~vvs~~~g   96 (267)
T PRK11880         88 -KLVVSIAAG   96 (267)
T ss_pred             -CEEEEecCC
Confidence             356666653

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=93.57  E-value=0.57  Score=35.34  Aligned_cols=70  Identities=16%  Similarity=0.225  Sum_probs=45.5

Q ss_pred             CCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCCh-HHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            3 QGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSE-QSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      +|++|...+......|+ +|+.++++.++.+.+.+-....++  |..+. +++...+.++..  +.+|+++.+.|.
T Consensus       196 ~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i--~~~~~~~~~~~~v~~~~~--~~~d~vid~~G~  267 (369)
T cd08301         196 LGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFV--NPKDHDKPVQEVIAEMTG--GGVDYSFECTGN  267 (369)
T ss_pred             CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEE--cccccchhHHHHHHHHhC--CCCCEEEECCCC
Confidence            58999998888878898 799999998887766443222222  33321 234444444332  368999998874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=93.56  E-value=0.31  Score=35.83  Aligned_cols=69  Identities=14%  Similarity=0.109  Sum_probs=44.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |+++++|..++......|++|+.++++.++.+.+.+-. ...+ .|..+. . ...+...  ..+.+|.++.+.|
T Consensus       154 g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g-~~~v-~~~~~~-~-~~~~~~~--~~~~~d~vld~~g  222 (326)
T cd08289         154 GATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLG-AKEV-IPREEL-Q-EESIKPL--EKQRWAGAVDPVG  222 (326)
T ss_pred             cCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcC-CCEE-EcchhH-H-HHHHHhh--ccCCcCEEEECCc
Confidence            67799999998888889999999999888777664322 2111 222222 1 1222222  1246899988876

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=93.52  E-value=0.47  Score=35.47  Aligned_cols=28  Identities=32%  Similarity=0.421  Sum_probs=25.0

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKA   29 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~   29 (162)
                      |.|.||+++++.+..-|++|+..+|.+.
T Consensus       153 G~GrIG~avA~r~~~Fgm~v~y~~~~~~  180 (324)
T COG1052         153 GLGRIGQAVARRLKGFGMKVLYYDRSPN  180 (324)
T ss_pred             CCCHHHHHHHHHHhcCCCEEEEECCCCC
Confidence            5789999999999988999999998763

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=93.47  E-value=0.57  Score=34.95  Aligned_cols=35  Identities=29%  Similarity=0.462  Sum_probs=31.2

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ   36 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~   36 (162)
                      |+|.-|.+++..|+++|++|.+.+|+++..+++..
T Consensus         8 GaGswGTALA~~la~ng~~V~lw~r~~~~~~~i~~   42 (329)
T COG0240           8 GAGSWGTALAKVLARNGHEVRLWGRDEEIVAEINE   42 (329)
T ss_pred             cCChHHHHHHHHHHhcCCeeEEEecCHHHHHHHHh
Confidence            56789999999999999999999999888777655

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=93.44  E-value=0.45  Score=35.37  Aligned_cols=106  Identities=22%  Similarity=0.249  Sum_probs=60.6

Q ss_pred             CCCCchHHHHHHHHHHCCC--eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHH-----HHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDC--RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVL-----SNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~-----~~~~~~~~~id~vi~~   73 (162)
                      |++|.+|.+++..|+.++.  +++++|.++..           -...|+.+......+.     ++..+.+..-|++|.+
T Consensus         6 GaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~-----------g~a~DL~~~~~~~~i~~~~~~~~~~~~~~daDivvit   74 (312)
T TIGR01772         6 GAAGGIGQPLSLLLKLQPYVSELSLYDIAGAA-----------GVAADLSHIPTAASVKGFSGEEGLENALKGADVVVIP   74 (312)
T ss_pred             CCCCHHHHHHHHHHHhCCCCcEEEEecCCCCc-----------EEEchhhcCCcCceEEEecCCCchHHHcCCCCEEEEe
Confidence            6679999999999998875  79999997611           1112222211000000     0112334577999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-CCCeEEEecccc
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKIINVGSVT  127 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~  127 (162)
                      +|.... +  .++.   ...+..|+.    +++...+.+.+. .++.++++|-..
T Consensus        75 aG~~~~-~--g~~R---~dll~~N~~----I~~~i~~~i~~~~p~~iiivvsNPv  119 (312)
T TIGR01772        75 AGVPRK-P--GMTR---DDLFNVNAG----IVKDLVAAVAESCPKAMILVITNPV  119 (312)
T ss_pred             CCCCCC-C--CccH---HHHHHHhHH----HHHHHHHHHHHhCCCeEEEEecCch
Confidence            997422 1  2232   334555655    556666555543 456777777544

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK14904 16S rRNA methyltransferase B; Provisional

Probab=93.39  E-value=1.1  Score=35.05  Aligned_cols=105  Identities=13%  Similarity=0.144  Sum_probs=58.4

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC------CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |+|+....+++.+. .+.+|+.++.+++.++.++..      .++.+...|..+..           ...++|.|+..+.
T Consensus       260 G~G~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~v~~~~~Da~~~~-----------~~~~fD~Vl~D~P  327 (445)
T PRK14904        260 APGGKSTFMAELMQ-NRGQITAVDRYPQKLEKIRSHASALGITIIETIEGDARSFS-----------PEEQPDAILLDAP  327 (445)
T ss_pred             CCCHHHHHHHHHhC-CCcEEEEEECCHHHHHHHHHHHHHhCCCeEEEEeCcccccc-----------cCCCCCEEEEcCC
Confidence            45566667776554 345999999999887765432      24566776765431           1147899997543


Q ss_pred             CCCCCCCC-------CCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEec
Q 042185           76 VQCVGPLA-------EVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG  124 (162)
Q Consensus        76 ~~~~~~~~-------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~is  124 (162)
                      -...+.+.       ..+.+++++..    .-...+++.+...+  +++|.+|+.+
T Consensus       328 csg~g~~~r~p~~~~~~~~~~~~~l~----~~q~~iL~~a~~~l--kpgG~lvyst  377 (445)
T PRK14904        328 CTGTGVLGRRAELRWKLTPEKLAELV----GLQAELLDHAASLL--KPGGVLVYAT  377 (445)
T ss_pred             CCCcchhhcCcchhhcCCHHHHHHHH----HHHHHHHHHHHHhc--CCCcEEEEEe
Confidence            22221111       12333333321    12334556665555  4578988855

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=93.39  E-value=0.59  Score=35.33  Aligned_cols=70  Identities=16%  Similarity=0.229  Sum_probs=46.2

Q ss_pred             CCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCCh-HHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            3 QGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSE-QSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      +|++|...+..+...|+ +|+.++++.++++.+.+-..-.+  .|..+. +++...+.++..  +.+|.++.+.|.
T Consensus       195 ~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~--i~~~~~~~~~~~~v~~~~~--~g~d~vid~~g~  266 (368)
T cd08300         195 LGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDC--VNPKDHDKPIQQVLVEMTD--GGVDYTFECIGN  266 (368)
T ss_pred             CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEE--EcccccchHHHHHHHHHhC--CCCcEEEECCCC
Confidence            58999999988888999 69999999888776643222122  343332 234444444322  368999998874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=93.38  E-value=0.85  Score=33.73  Aligned_cols=70  Identities=23%  Similarity=0.245  Sum_probs=45.1

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChh-hHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCcc-EEEECC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKA-TMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKID-VLVNNA   74 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~-~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id-~vi~~a   74 (162)
                      |.|-+|.+++..|.+.|++|.+.+|+.. ..+++..+..+.++.  +.+ +.++.+++++....-+.+ ++|++.
T Consensus        11 G~G~~G~~lA~~l~~~G~~V~~~~r~~~~~~~~~~~~advvi~~--vp~-~~~~~v~~~l~~~~~~~~~ivi~~s   82 (308)
T PRK14619         11 GAGAWGSTLAGLASANGHRVRVWSRRSGLSLAAVLADADVIVSA--VSM-KGVRPVAEQVQALNLPPETIIVTAT   82 (308)
T ss_pred             CccHHHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHhcCCEEEEE--CCh-HHHHHHHHHHHHhcCCCCcEEEEeC
Confidence            5788999999999999999999999753 334443333343333  333 467888877754211233 455554

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=93.29  E-value=0.63  Score=32.18  Aligned_cols=28  Identities=11%  Similarity=0.300  Sum_probs=24.6

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChh
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKA   29 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~   29 (162)
                      |.||+|.++++.|+..|. ++.++|.+.-
T Consensus        26 G~gglGsevak~L~~~GVg~i~lvD~d~v   54 (198)
T cd01485          26 GAGALGAEIAKNLVLAGIDSITIVDHRLV   54 (198)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEECCcC
Confidence            578899999999999998 7999998743

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK05708 2-dehydropantoate 2-reductase; Provisional

Probab=93.26  E-value=0.11  Score=38.44  Aligned_cols=35  Identities=23%  Similarity=0.275  Sum_probs=29.9

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ   36 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~   36 (162)
                      |.|+||.-++-.|.+.|++|.+++|..+.++.+..
T Consensus         9 GaGaiG~~~a~~L~~~G~~V~lv~r~~~~~~~i~~   43 (305)
T PRK05708          9 GAGSLGSLWACRLARAGLPVRLILRDRQRLAAYQQ   43 (305)
T ss_pred             CCCHHHHHHHHHHHhCCCCeEEEEechHHHHHHhh
Confidence            57899999999999999999999998766665543

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=93.23  E-value=1  Score=31.20  Aligned_cols=27  Identities=11%  Similarity=0.103  Sum_probs=24.1

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecCh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSK   28 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~   28 (162)
                      |+|.+|...++.|.+.|++|++++++.
T Consensus        17 GgG~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718         17 GGGKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            568999999999999999999998764

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=93.22  E-value=0.93  Score=33.68  Aligned_cols=49  Identities=18%  Similarity=0.224  Sum_probs=33.8

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChh---------hHHhhhcCCceeEEEeccCCh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKA---------TMADLEQDPRFFVQELDVLSE   50 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~---------~~~~~~~~~~~~~~~~D~~~~   50 (162)
                      |-|.||+++|+.+..-|++|+..+|...         .++++..+..+..+.+-++..
T Consensus       152 G~G~IG~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell~~sDvv~lh~Plt~~  209 (311)
T PRK08410        152 GLGTIGKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELLKTSDIISIHAPLNEK  209 (311)
T ss_pred             CCCHHHHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHhhcCCEEEEeCCCCch
Confidence            5689999999999999999999988532         223333345555555555543

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=93.19  E-value=1.9  Score=32.83  Aligned_cols=71  Identities=18%  Similarity=0.167  Sum_probs=44.7

Q ss_pred             CCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            3 QGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      +|.+|..++..+...|. +|+.+++++++.+.+.+.....+  .+..+.++....+.+... ...+|.++.+.|.
T Consensus       193 ~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~v--i~~~~~~~~~~~l~~~~~-~~~~D~vld~vg~  264 (386)
T cd08283         193 CGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAET--INFEEVDDVVEALRELTG-GRGPDVCIDAVGM  264 (386)
T ss_pred             CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEE--EcCCcchHHHHHHHHHcC-CCCCCEEEECCCC
Confidence            57889998888888898 59999999888776655423332  233332223222322211 1269999999874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=93.15  E-value=0.15  Score=37.34  Aligned_cols=33  Identities=18%  Similarity=0.304  Sum_probs=28.8

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADL   34 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~   34 (162)
                      |.|-+|..+|..|+++|++|++.+++++.++++
T Consensus         8 G~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~   40 (288)
T PRK09260          8 GAGVMGRGIAYVFAVSGFQTTLVDIKQEQLESA   40 (288)
T ss_pred             CccHHHHHHHHHHHhCCCcEEEEeCCHHHHHHH
Confidence            467899999999999999999999998776653

>PRK12921 2-dehydropantoate 2-reductase; Provisional

Probab=93.06  E-value=0.19  Score=36.91  Aligned_cols=34  Identities=15%  Similarity=0.211  Sum_probs=28.6

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ   36 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~   36 (162)
                      |.|.+|..++..|++.|++|.+++| .+..+.+.+
T Consensus         7 G~G~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~~~   40 (305)
T PRK12921          7 GAGAVGGTFGGRLLEAGRDVTFLVR-PKRAKALRE   40 (305)
T ss_pred             CCCHHHHHHHHHHHHCCCceEEEec-HHHHHHHHh
Confidence            5789999999999999999999999 666655543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	162
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		7e-20
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		1e-16
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		1e-16
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		3e-16
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		2e-15
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		7e-15
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		7e-15
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		1e-14
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		1e-14
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		1e-14
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		2e-14
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		3e-14
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		4e-14
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		6e-14
1a27_A	289	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C		6e-14
1fdu_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M		6e-14
1fds_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C		6e-14
1fdw_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M		6e-14
1equ_A	327	Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin		7e-14
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		8e-14
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		8e-14
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		9e-14
1iol_A	327	Estrogenic 17-beta Hydroxysteroid Dehydrogenase Com		1e-13
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		1e-13
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		2e-13
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		3e-13
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		3e-13
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-13
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		3e-13
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		3e-13
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		5e-13
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-13
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		5e-13
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		5e-13
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		5e-13
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		6e-13
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-13
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		1e-12
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		1e-12
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		1e-12
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		2e-12
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		2e-12
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		2e-12
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		2e-12
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		2e-12
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		2e-12
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		3e-12
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		4e-12
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		5e-12
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		5e-12
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		6e-12
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		7e-12
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		7e-12
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		7e-12
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		7e-12
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		7e-12
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		8e-12
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		1e-11
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		1e-11
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		1e-11
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		1e-11
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		2e-11
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-11
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		2e-11
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		2e-11
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		3e-11
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		3e-11
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		3e-11
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		3e-11
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		4e-11
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		5e-11
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		5e-11
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		7e-11
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		7e-11
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		7e-11
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		8e-11
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		8e-11
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		8e-11
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		8e-11
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		8e-11
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		8e-11
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		9e-11
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		1e-10
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		1e-10
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		1e-10
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		2e-10
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-10
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		2e-10
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		2e-10
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		2e-10
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		2e-10
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		2e-10
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		2e-10
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		2e-10
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		3e-10
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		3e-10
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		3e-10
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		3e-10
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		3e-10
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		3e-10
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		4e-10
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		4e-10
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		4e-10
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		4e-10
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		5e-10
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		5e-10
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		6e-10
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		6e-10
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		8e-10
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		8e-10
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		1e-09
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		1e-09
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		1e-09
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		1e-09
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		1e-09
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		2e-09
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		2e-09
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-09
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		2e-09
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		2e-09
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		2e-09
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		3e-09
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		3e-09
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		3e-09
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		3e-09
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		3e-09
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-09
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		4e-09
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		5e-09
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		6e-09
3u9l_A	324	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		6e-09
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		7e-09
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		9e-09
3uxy_A	266	The Crystal Structure Of Short Chain Dehydrogenase		1e-08
4imr_A	275	Crystal Structure Of 3-oxoacyl (acyl-carrier-protei		1e-08
3kzv_A	254	The Crystal Structure Of A Cytoplasmic Protein With		2e-08
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		2e-08
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		2e-08
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		2e-08
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		2e-08
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		3e-08
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		5e-08
1pwx_A	254	Crystal Structure Of The Haloalcohol Dehalogenase H		5e-08
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		6e-08
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		7e-08
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		9e-08
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		1e-07
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		1e-07
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		1e-07
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		1e-07
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		1e-07
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		1e-07
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		1e-07
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-07
3pxx_A	287	Crystal Structure Of Carveol Dehydrogenase From Myc		2e-07
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		2e-07
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-07
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		2e-07
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		3e-07
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		3e-07
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		3e-07
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		3e-07
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		4e-07
4dry_A	281	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		4e-07
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		6e-07
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		8e-07
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		8e-07
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		8e-07
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		8e-07
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		1e-06
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		1e-06
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		1e-06
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		1e-06
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		2e-06
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		2e-06
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		2e-06
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		2e-06
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		3e-06
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		3e-06
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		3e-06
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		5e-06
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		5e-06
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		5e-06
3sc4_A	285	Crystal Structure Of A Short Chain Dehydrogenase (A		7e-06
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		7e-06
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		7e-06
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		9e-06
4ixt_A	254	Structure Of A 37-fold Mutant Of Halohydrin Dehalog		9e-06
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		9e-06
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		1e-05
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		1e-05
1wma_A	276	Crystal Structure Of Human Cbr1 In Complex With Hyd		1e-05
2pfg_A	276	Crystal Structure Of Human Cbr1 In Complex With Big		1e-05
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		1e-05
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		1e-05
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		2e-05
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		2e-05
1n5d_A	288	Crystal Structure Of Porcine Testicular Carbonyl Re		2e-05
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-05
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-05
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		2e-05
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-05
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		3e-05
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		3e-05
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		3e-05
3i1j_A	247	Structure Of A Putative Short Chain Dehydrogenase F		3e-05
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		3e-05
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		3e-05
2hrb_A	274	Crystal Structure Of Human Carbonyl Reductase 3, Co		4e-05
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		6e-05
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		8e-05
4gkb_A	258	Crystal Structure Of A Short Chain Dehydrogenase Ho		1e-04
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		1e-04
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		1e-04
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		2e-04
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		2e-04
1mxf_A	276	Crystal Structure Of Inhibitor Complex Of Putative		2e-04
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		3e-04
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		3e-04
1mxh_A	276	Crystal Structure Of Substrate Complex Of Putative		3e-04
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		4e-04
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		4e-04
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		5e-04
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		6e-04
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		6e-04
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		7e-04
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		7e-04
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		7e-04
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		8e-04
3ksu_A	262	Crystal Structure Of Short-Chain Dehydrogenase From		9e-04

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 93.2 bits (230), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 86/159 (54%), Gaps = 5/159 (3%)
Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPR-----FFVQELDVLSEQSVQNV 56
           + GGIG  +AR    +  +++   R +A +  +  + R        Q LDV    SV   
Sbjct: 12  ASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAF 71
Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
               ++ +G+IDVLVNNAGV  + PLA V +   E+  + N+ G +  + AV+P M  ++
Sbjct: 72  AQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR 131
Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
            G+IIN+GS+   +  P A  Y A+K A+ +++D LR E
Sbjct: 132 SGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE 170

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 81/164 (49%), Gaps = 7/164 (4%)
Query: 5   GIGHALARAFAASDCRVVATGRS--KATMADLEQDPRFFVQEL----DVLSEQSVQNVLS 58
           G+G  +A+  A + C VV   R+  +A+ A  +   ++ V+ +    DV + + V+ +L 
Sbjct: 32  GLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLE 91
Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
            V EKFGK+D +VN AG+    P  E PL    Q    N+FG   + +     +      
Sbjct: 92  AVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNP 151
Query: 119 KIINVGSVTV-AAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            IIN+GS+TV     P    Y ASK  + SLT  L  E G +GI
Sbjct: 152 SIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGI 195

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 72/143 (50%), Gaps = 2/143 (1%)
Query: 21  VVATGRSKATMADL--EQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC 78
           V+ T R    + DL      R     LDV   + +  V ++VL ++G++DVLVNNAG   
Sbjct: 32  VIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQ 91
Query: 79  VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTY 138
           VG   E     +   F  +VFGP RL +A++P    R  G ++N+ S            Y
Sbjct: 92  VGAFEETTERELRDLFELHVFGPARLTRALLPQXRERGSGSVVNISSFGGQLSFAGFSAY 151
Query: 139 TASKAALHSLTDTLRLELGHFGI 161
           +A+KAAL  L++ L  E+  FGI
Sbjct: 152 SATKAALEQLSEGLADEVAPFGI 174

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLE 62
           G G  + R F     +V+ATGR +  + +L+ +     ++ +LDV +  +++ +L+++  
Sbjct: 11  GFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPA 70
Query: 63  KFGKIDVLVNNAGVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
           ++  ID+LVNNAG+   + P  +  +   E   +TN  G + + +AV+P M  R  G II
Sbjct: 71  EWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHII 130
Query: 122 NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
           N+GS   + P      Y A+KA +   +  LR +L
Sbjct: 131 NIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDL 165

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 7/166 (4%)
Query: 2   SQGGIGHALARAFAASDCRV----VATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVL 57
           S  GIG A A A+     RV    +    ++AT A++   P      LDV  + S+   +
Sbjct: 13  SARGIGRAFAEAYVREGARVAIADINLEAARATAAEI--GPAACAIALDVTDQASIDRCV 70
Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM-AYRK 116
           + +L+++G ID+LVNNA +  + P+ E+   + ++ F  NV G + ++QAV   M A  +
Sbjct: 71  AELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGR 130
Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
            GKIIN+ S          G Y A+KAA+ SLT +  L L   GI+
Sbjct: 131 GGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGIN 176

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 76.3 bits (186), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 87/167 (52%), Gaps = 13/167 (7%)
Query: 2   SQGGIGHALARAF---AASDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQ 51
           +  GIG A A  +   +  D +++   R    + +L++       + +  V +LD+   +
Sbjct: 41  ASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAE 100
Query: 52  SVQNVLSNVLEKFGKIDVLVNNAGVQCVGP--LAEVPLSAMEQTFNTNVFGPMRLVQAVV 109
            ++  + N+ ++F  ID+LVNNAG + +G   + ++    ++  F+TNV   + + QAV+
Sbjct: 101 KIKPFIENLPQEFKDIDILVNNAG-KALGSDRVGQIATEDIQDVFDTNVTALINITQAVL 159
Query: 110 PHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
           P    +  G I+N+GS+      P    Y ASK A+ + TD+LR EL
Sbjct: 160 PIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKEL 206

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 76.3 bits (186), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 69/123 (56%), Gaps = 1/123 (0%)
Query: 39  RFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNV 98
           +  V ELDV   Q V   +++ +E  G +D+LVNNAG+  +GP+ +   +   +  +TN+
Sbjct: 57  KVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNL 116
Query: 99  FGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH 158
            G M + +A +PH+  R KG ++ + S+        A  Y A+K  +++ ++TLR E+  
Sbjct: 117 LGLMYMTRAALPHL-LRSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTE 175
Query: 159 FGI 161
            G+
Sbjct: 176 RGV 178

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Query: 44  ELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMR 103
           E +V  EQ  + V+   L++FGKI VLVNNAG     P  ++P+S  E  F  N+F   R
Sbjct: 67  ECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFR 125
Query: 104 LVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           L Q   PHM     G I+N+ S+          +Y +SKAA++ LT  +  ++G  GI
Sbjct: 126 LSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGI 183

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 85/167 (50%), Gaps = 7/167 (4%)
Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMAD--LEQDPRFFVQEL----DVLSEQSVQN 55
           S  G+G ++A  FA    +VV   RSK   A+  LE+  +   + +    DV  E  V N
Sbjct: 15  SSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVIN 74
Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
           ++ + +++FGK+DV++NNAG++      E+ LS   +  +TN+ G     +  + +    
Sbjct: 75  LVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEN 134
Query: 116 K-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             KG +IN+ SV    P P    Y ASK  +  +T+TL LE    GI
Sbjct: 135 DIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGI 181

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 85/167 (50%), Gaps = 7/167 (4%)
Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMAD--LEQDPRFFVQEL----DVLSEQSVQN 55
           S  G+G ++A  FA    +VV   RSK   A+  LE+  +   + +    DV  E  V N
Sbjct: 15  SSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVIN 74
Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
           ++ + +++FGK+DV++NNAG++      E+ LS   +  +TN+ G     +  + +    
Sbjct: 75  LVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEN 134
Query: 116 K-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             KG +IN+ SV    P P    Y ASK  +  +T+TL LE    GI
Sbjct: 135 DIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGI 181

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 80/163 (49%), Gaps = 6/163 (3%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQEL-----DVLSEQSVQNVLSN 59
           GIG A+A+ FA +D  VVA    +  +  + Q+ R   +E+     DV  ++ V+  +  
Sbjct: 18  GIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRR 77
Query: 60  VLEKFGKIDVLVNNAGV-QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
             E + +IDVL NNAG+   V P+AEV     E+    N++      +AV+P M  + KG
Sbjct: 78  TFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKG 137
Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            I+N  S+     G     YT +K  L  LT ++    G  GI
Sbjct: 138 VIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGI 180

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 84/167 (50%), Gaps = 7/167 (4%)
Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMAD--LEQDPRFFVQEL----DVLSEQSVQN 55
           S  G+G ++A  FA    +VV   RSK   A+  LE+  +   + +    DV  E  V N
Sbjct: 15  SSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVIN 74
Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
           ++ + +++FGK+DV++NNAG++      E+ LS   +  +TN+ G     +  + +    
Sbjct: 75  LVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEN 134
Query: 116 K-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             KG +IN+ SV    P P    Y ASK  +  +T TL LE    GI
Sbjct: 135 DIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALEYAPKGI 181

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 73.9 bits (180), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 84/167 (50%), Gaps = 7/167 (4%)
Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMAD--LEQDPRFFVQEL----DVLSEQSVQN 55
           S  G+G ++A  FA    +VV   RSK   A+  LE+  +   + +    DV  E  V N
Sbjct: 15  SSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVIN 74
Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
           ++ + +++FGK+DV++NNAG+       E+ LS   +  +TN+ G     +  + +    
Sbjct: 75  LVQSAIKEFGKLDVMINNAGLANPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEN 134
Query: 116 K-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             KG +IN+ SV    P P    Y ASK  +  +T+TL LE    GI
Sbjct: 135 DIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGI 181

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 5/165 (3%)
Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQE-----LDVLSEQSVQNV 56
           S  G+G A+A   A +  R++  G   + +A   Q+ R    +      DV SE  +   
Sbjct: 34  SSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEA 93
Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
            + + E+   +D+LVNNAG+Q   P+ E+  +  ++  +TN+     + +     M  R 
Sbjct: 94  FARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG 153
Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            GKI+N+GS+T          YT +K  +  LT  +  E   +GI
Sbjct: 154 YGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGI 198

>pdb|1A27|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C-Terminal Deletion Mutant Complexed With Estradiol And Nadp+ Length = 289

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 1   CSQGGIGHALARAFAASDC---RVVATGRSKATMADLEQDPRFF--------VQELDVLS 49
           CS G IG  LA   A+      +V AT R   T   L +  R            +LDV  
Sbjct: 10  CSSG-IGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRD 68
Query: 50  EQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVV 109
            +SV      V E  G++DVLV NAG+  +GPL  +   A+    + NV G +R++QA +
Sbjct: 69  SKSVAAARERVTE--GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFL 126
Query: 110 PHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           P M  R  G+++  GSV      P+   Y ASK AL  L ++L + L  FG+
Sbjct: 127 PDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV 178

>pdb|1FDU|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221l Complexed With Estradiol And Nadp+ Length = 327

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 1   CSQGGIGHALARAFAASDC---RVVATGRSKATMADLEQDPRFF--------VQELDVLS 49
           CS G IG  LA   A+      +V AT R   T   L +  R            +LDV  
Sbjct: 10  CSSG-IGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRD 68
Query: 50  EQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVV 109
            +SV      V E  G++DVLV NAG+  +GPL  +   A+    + NV G +R++QA +
Sbjct: 69  SKSVAAARERVTE--GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFL 126
Query: 110 PHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           P M  R  G+++  GSV      P+   Y ASK AL  L ++L + L  FG+
Sbjct: 127 PDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV 178

>pdb|1FDS|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Complexed With 17- Beta-Estradiol Length = 327

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 1   CSQGGIGHALARAFAASDC---RVVATGRSKATMADLEQDPRFF--------VQELDVLS 49
           CS G IG  LA   A+      +V AT R   T   L +  R            +LDV  
Sbjct: 10  CSSG-IGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRD 68
Query: 50  EQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVV 109
            +SV      V E  G++DVLV NAG+  +GPL  +   A+    + NV G +R++QA +
Sbjct: 69  SKSVAAARERVTE--GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFL 126
Query: 110 PHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           P M  R  G+++  GSV      P+   Y ASK AL  L ++L + L  FG+
Sbjct: 127 PDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV 178

>pdb|1FDW|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221q Complexed With Estradiol Length = 327

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 1   CSQGGIGHALARAFAASDC---RVVATGRSKATMADLEQDPRFF--------VQELDVLS 49
           CS G IG  LA   A+      +V AT R   T   L +  R            +LDV  
Sbjct: 10  CSSG-IGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRD 68
Query: 50  EQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVV 109
            +SV      V E  G++DVLV NAG+  +GPL  +   A+    + NV G +R++QA +
Sbjct: 69  SKSVAAARERVTE--GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFL 126
Query: 110 PHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           P M  R  G+++  GSV      P+   Y ASK AL  L ++L + L  FG+
Sbjct: 127 PDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV 178

>pdb|1EQU|A Chain A, Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin Complexed With Nadp+ Length = 327

Iteration: 1
 Score = 73.2 bits (178), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 1   CSQGGIGHALARAFAASDC---RVVATGRSKATMADLEQDPRFF--------VQELDVLS 49
           CS G IG  LA   A+      +V AT R   T   L +  R            +LDV  
Sbjct: 10  CSSG-IGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRD 68
Query: 50  EQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVV 109
            +SV      V E  G++DVLV NAG+  +GPL  +   A+    + NV G +R++QA +
Sbjct: 69  SKSVAAARERVTE--GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFL 126
Query: 110 PHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           P M  R  G+++  GSV      P+   Y ASK AL  L ++L + L  FG+
Sbjct: 127 PDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV 178

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 72.8 bits (177), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 4/160 (2%)
Query: 5   GIGHALARAFAASDCRVVATGRSKA---TMADLEQDPRFFVQELDVLSEQSVQNVLSNVL 61
           GIG A+A   A    +V+ T  S++    ++D   D    +  L+V + +S++ VL  + 
Sbjct: 23  GIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMA-LNVTNPESIEAVLKAIT 81
Query: 62  EKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
           ++FG +D+LVNNAG+     L  +          TN+    RL +AV+  M  +++G+II
Sbjct: 82  DEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRII 141
Query: 122 NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           NVGSV           Y A+KA +   T ++  E+   G+
Sbjct: 142 NVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGV 181

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 72.8 bits (177), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 4/160 (2%)
Query: 5   GIGHALARAFAASDCRVVATGRSKA---TMADLEQDPRFFVQELDVLSEQSVQNVLSNVL 61
           GIG A+A   A    +V+ T  S++    ++D   D    +  L+V + +S++ VL  + 
Sbjct: 23  GIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMA-LNVTNPESIEAVLKAIT 81
Query: 62  EKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
           ++FG +D+LVNNAG+     L  +          TN+    RL +AV+  M  +++G+II
Sbjct: 82  DEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRII 141
Query: 122 NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           NVGSV           Y A+KA +   T ++  E+   G+
Sbjct: 142 NVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGV 181

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 72.8 bits (177), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 1/128 (0%)
Query: 35  EQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTF 94
           +Q  +   + LDV  + +++ ++++ +E+FG++DV+V NAGV   G + E+     +   
Sbjct: 74  DQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVI 133
Query: 95  NTNVFGPMRLVQAVVPHMAYR-KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR 153
             N+ G  R ++A VP M      G I+ V S       P  G Y+ASK  L +LT+TL 
Sbjct: 134 GVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTNTLA 193
Query: 154 LELGHFGI 161
           +ELG +GI
Sbjct: 194 IELGEYGI 201

>pdb|1IOL|A Chain A, Estrogenic 17-beta Hydroxysteroid Dehydrogenase Complexed 17-beta- Estradiol Length = 327

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 1   CSQGGIGHALARAFAASDC---RVVATGRSKATMADLEQDPRFF--------VQELDVLS 49
           CS G IG  LA   A+      +V AT R   T   L +  R            +LDV  
Sbjct: 10  CSSG-IGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRD 68
Query: 50  EQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVV 109
            +SV      V E  G++DVLV NAG+  +GPL  +   A+      NV G +R++QA +
Sbjct: 69  SKSVAAARERVTE--GRVDVLVCNAGLGLLGPLEALGEDAVASVLEVNVVGTVRMLQAFL 126
Query: 110 PHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           P M  R  G+++  GSV      P+   Y ASK AL  L ++L + L  FG+
Sbjct: 127 PDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV 178

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 77/169 (45%), Gaps = 9/169 (5%)
Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------PRFFVQELDVLSEQSVQN 55
           +  G G A+A  F A   RV A   S  T+ +  +        +      DV  E  V  
Sbjct: 10  ASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNA 69
Query: 56  VLSNVLEKFGKIDVLVNNAGVQC---VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM 112
            ++  +E+FG IDVLVNNAG+      G L   P+   ++    NV G     +AV+PHM
Sbjct: 70  AIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHM 129
Query: 113 AYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             +  G I+N+ SV      P    YT SK A+  LT ++ ++    GI
Sbjct: 130 LLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGI 178

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 39  RFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNV 98
           +  V ELDV   Q V   +++ +E  G +D+LVNNAG+  +GP+ +   +   +  +TN+
Sbjct: 57  KVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIXLLGPVEDADTTDWTRXIDTNL 116
Query: 99  FGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH 158
            G     +A +PH+  R KG ++   S+        A  Y A+K  +++ ++TLR E+  
Sbjct: 117 LGLXYXTRAALPHL-LRSKGTVVQXSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTE 175
Query: 159 FGI 161
            G+
Sbjct: 176 RGV 178

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 7/162 (4%)
Query: 6   IGHALARAFAASDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVLSNV 60
           +G  LAR  A     +V   R+   + D+ +       R      D+  +  V +++   
Sbjct: 23  LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDET 82
Query: 61  LEKFGKIDVLVNNA-GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
           ++ +G++DV++NNA  V  + P A      M       VFG +RL+Q   P +    KG 
Sbjct: 83  MKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALE-ESKGA 141
Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           ++NV S+ V       G Y  +K+AL +++ TL  ELG  GI
Sbjct: 142 VVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGI 183

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 46  DVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG-PLAEVPLSAMEQTFNTNVFGPMRL 104
           DV    SV+ + +  +EKFG++DVL NNAG      P  ++  +  +Q  +TN+ GP   
Sbjct: 82  DVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPXEDLTFAQWKQVVDTNLTGPFLC 141
Query: 105 VQAV--VPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
            Q    V      + G+IIN GS++  +P P++  YTA+K A+  LT +  L+
Sbjct: 142 TQEAFRVXKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLD 194

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 4/160 (2%)
Query: 5   GIGHALARAFAASDCRVVATGRSKA---TMADLEQDPRFFVQELDVLSEQSVQNVLSNVL 61
           GIG A+A   A    +V+ T  S++    ++D   D    +  L+V + +S++ VL  + 
Sbjct: 23  GIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMA-LNVTNPESIEAVLKAIT 81
Query: 62  EKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
           ++FG +D+LVNNAG+     L  +          TN+    RL +AV+  M  +++G+II
Sbjct: 82  DEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRII 141
Query: 122 NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           NVGSV           + A+KA +   T ++  E+   G+
Sbjct: 142 NVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAREVASRGV 181

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 6/161 (3%)
Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           GIG A+A   AA   +V+ T  S    +A    L  + +  +  L+V    S+++VL  +
Sbjct: 16  GIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLM--LNVTDPASIESVLEKI 73
Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
             +FG++D+LVNNAG+     L  +          TN+    RL +AV+  M  ++ G+I
Sbjct: 74  RAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRI 133
Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           I +GSV           Y A+KA L   + +L  E+   GI
Sbjct: 134 ITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGI 174

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------PRFFVQEL--DVLSEQSV 53
           S  GIG + A  FA    +V  TGR++  + + +Q       P   +  +  DV      
Sbjct: 34  SSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQ 93
Query: 54  QNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEV--PLSAMEQTFNTNVFGPMRLVQAVVPH 111
            ++++  L KFGKID+LVNNAG       A    P+   ++TF  N    + + Q    H
Sbjct: 94  DDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEH 153
Query: 112 MAYRKKGKIINVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
           +  + KG+I+NV S+ VA P   +G   Y  +KAAL   T    ++L   G+
Sbjct: 154 L-IKTKGEIVNVSSI-VAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGV 203

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 3/150 (2%)
Query: 13  AFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN 72
           A A  D    A  +++A++ +   + R +V   DV SE++V   + +V+  FGKID L N
Sbjct: 33  AIALLDMNREALEKAEASVREKGVEARSYV--CDVTSEEAVIGTVDSVVRDFGKIDFLFN 90
Query: 73  NAGVQ-CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP 131
           NAG Q    P+ + P     +    NV G   +++AV   M  +  G+I+N  S+     
Sbjct: 91  NAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKG 150
Query: 132 GPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            P    Y  SK A+ +LT+T  L+L  + I
Sbjct: 151 PPNMAAYGTSKGAIIALTETAALDLAPYNI 180

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 80/160 (50%), Gaps = 4/160 (2%)
Query: 5   GIGHALARAFAASDCRVVATGRSKA---TMADLEQDPRFFVQELDVLSEQSVQNVLSNVL 61
           GIG A+A   A    +V+ T  S++    ++D   D    +  L+V + +S++ VL  + 
Sbjct: 23  GIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMA-LNVTNPESIEAVLKAIT 81
Query: 62  EKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
           ++FG +D+LVNNA +     L  +          TN+    RL +AV+  M  +++G+II
Sbjct: 82  DEFGGVDILVNNAAITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRII 141
Query: 122 NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           NVGSV           Y A+KA +   T ++  E+   G+
Sbjct: 142 NVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGV 181

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Query: 5   GIGHALARAFAASDCRVVAT---GRSKATMADLEQDP---RFFVQELDVLSEQSVQNVLS 58
           G+G A+A  F   + +VV        +A  A  E +    +  + + DV  E+ V N++ 
Sbjct: 26  GLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQGDVTKEEDVVNLVQ 85
Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-K 117
             +++FG +DV++NNAGV+   P  E+ L    +  +TN+ G     +  + +      K
Sbjct: 86  TAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKYFVENDIK 145
Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G +IN+ SV    P P    Y ASK  +  +T+TL LE    GI
Sbjct: 146 GNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGI 189

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Query: 5   GIGHALARAFAASDCRVVAT---GRSKATMADLEQDP---RFFVQELDVLSEQSVQNVLS 58
           G+G A+A  F   + +VV        +A  A  E +    +  + + DV  E+ V N++ 
Sbjct: 26  GLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQGDVTKEEDVVNLVQ 85
Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-K 117
             +++FG +DV++NNAGV+   P  E+ L    +  +TN+ G     +  + +      K
Sbjct: 86  TAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKYFVENDIK 145
Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G +IN+ SV    P P    Y ASK  +  +T+TL LE    GI
Sbjct: 146 GNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGI 189

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 11/165 (6%)
Query: 5   GIGHALARAFAASDCRVV-----ATGRSKATMADLEQ-DPRFFVQELDVLSEQSVQNVLS 58
           GIG A+A+  A     V      A  R++A ++++EQ   R      D    ++++  + 
Sbjct: 42  GIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIR 101
Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
             +E  G +D+LVN+AG+    PL E  ++  ++    N   P   +++   H+     G
Sbjct: 102 ETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVXAVNFRAPFVAIRSASRHLG--DGG 159
Query: 119 KIINVGSVTVAAPGPWAGT--YTASKAALHSLTDTLRLELGHFGI 161
           +II +GS  +A   PW G   Y+ASKAAL  LT  L  +LG  GI
Sbjct: 160 RIITIGS-NLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGI 203

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 70.1 bits (170), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Query: 5   GIGHALARAFAASDCRVVAT---GRSKATMADLEQDP---RFFVQELDVLSEQSVQNVLS 58
           G+G A+A  F   + +VV        +A  A  E +    +  + + DV  E+ V N++ 
Sbjct: 26  GLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQGDVTKEEDVVNLVQ 85
Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-K 117
             +++FG +DV++NNAGV+   P  E+ L    +  +TN+ G     +  + +      K
Sbjct: 86  TAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKYFVENDIK 145
Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G +IN+ SV    P P    Y ASK  +  +T+TL LE    GI
Sbjct: 146 GNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGI 189

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 80/160 (50%), Gaps = 4/160 (2%)
Query: 5   GIGHALARAFAASDCRVVATGRSKA---TMADLEQDPRFFVQELDVLSEQSVQNVLSNVL 61
           GIG A+A   A    +V+ T  S++    ++D   D    +  L+V + +S++ VL  + 
Sbjct: 23  GIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMA-LNVTNPESIEAVLKAIT 81
Query: 62  EKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
           ++FG +D+LVNNA +     L  +          TN+    RL +AV+  M  +++G+II
Sbjct: 82  DEFGGVDILVNNADITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRII 141
Query: 122 NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           NVGSV           Y A+KA +   T ++  E+   G+
Sbjct: 142 NVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGV 181

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 10/168 (5%)
Query: 2   SQGGIGHALARAFAASDCRVVAT-------GRSKATMADLEQDPRFFVQELDVLSEQSVQ 54
           S  G+G A A   AA+  RV+           S  T+     D        DV  E +++
Sbjct: 17  SARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVA--FDVTDELAIE 74
Query: 55  NVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY 114
              S +  +   +D+L+NNAG+Q   P+ E+ L   ++  +TN+     + ++    M  
Sbjct: 75  AAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIA 134
Query: 115 RKK-GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           R   GKIIN+GS+T  A  P    YTA+K  +  LT ++  E   F I
Sbjct: 135 RNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNI 182

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 6/161 (3%)
Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           GIG A+A   AA   +V+ T  S    +A    L  + +  +  L+V    S+++VL  +
Sbjct: 16  GIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLM--LNVTDPASIESVLEKI 73
Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
             +FG++D+LVNNAG+     L  +          TN+    RL +AV+  M  ++ G+I
Sbjct: 74  RAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRI 133
Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           I +GSV           + A+KA L   + +L  E+   GI
Sbjct: 134 ITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRGI 174

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 80/174 (45%), Gaps = 16/174 (9%)
Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--------DPRFFVQELDVLSEQSV 53
           S  GIG   A  FA     V  TGRS   + +  Q        + +      DV +E   
Sbjct: 14  SSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQ 73
Query: 54  QNVLSNVLEKFGKIDVLVNNAGVQCVGPLA----EVPLSAMEQTFNTNVFGPMRLVQAVV 109
             ++++ L++FGKIDVLVNNAG            +  +    +T   N+   + + + V 
Sbjct: 74  DQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVK 133
Query: 110 PHMAYRKKGKIINVGSVTVAAP--GPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           PH+    KG+I+NV S+ VA P   P    Y  +KAAL   T +  ++L  FGI
Sbjct: 134 PHLV-ASKGEIVNVSSI-VAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGI 185

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 6/161 (3%)
Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATM----ADLEQDPRFFVQEL-DVLSEQSVQNV 56
           S  GIG A+AR  A     VV + R +  +    A L+ +       +  V   +  + +
Sbjct: 23  STDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERL 82
Query: 57  LSNVLEKFGKIDVLVNNAGVQ-CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
           ++  ++  G ID+LV+NA V    G + +V     ++T + NV  P  + +AVVP M  R
Sbjct: 83  VATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKR 142
Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
             G ++ V S+   +P P    Y  SK AL  LT TL +EL
Sbjct: 143 GGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIEL 183

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 76/158 (48%), Gaps = 7/158 (4%)
Query: 11  ARAFAASDCRVVATGRSKATMAD----LEQDP-RFFVQELDVLSEQSVQNVLSNVLEKFG 65
           A  FA    RVV TGR+K  + +    +EQ P +    + DV +   +Q  +  + EKFG
Sbjct: 23  ATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQXDVRNTDDIQKXIEQIDEKFG 82
Query: 66  KIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVG 124
           +ID+L+NNA    + P  ++ ++      N  + G     QA+  +   +  KG IIN  
Sbjct: 83  RIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINXV 142
Query: 125 SVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH-FGI 161
           +      GP      A+KA + + T TL +E G  +GI
Sbjct: 143 ATYAWDAGPGVIHSAAAKAGVLAXTKTLAVEWGRKYGI 180

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           GIG+A A AF  +  +V  TG  +A     EQ P F  + +DV     V  V   +L + 
Sbjct: 18  GIGYATALAFVEAGAKV--TGFDQAFTQ--EQYP-FATEVMDVADAAQVAQVCQRLLAET 72
Query: 65  GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG 124
            ++D LVN AG+  +G   ++     +QTF  NV G   L Q  +     ++ G I+ V 
Sbjct: 73  ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVA 132
Query: 125 SVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           S     P      Y ASKAAL SL  ++ LEL   G+
Sbjct: 133 SDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGV 169

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 1/152 (0%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           GIG A+AR F+     ++   R    +  L   P     ++DV  + +    ++   + +
Sbjct: 27  GIGEAIARRFSEEGHPLLLLARRVERLKALNL-PNTLCAQVDVTDKYTFDTAITRAEKIY 85
Query: 65  GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG 124
           G  D +VNNAG+  +G +     +  ++ F+ NV G +  +QAV+  M  R  G IIN+ 
Sbjct: 86  GPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINIS 145
Query: 125 SVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
           S+      P    Y  +K A+H++++ +R E+
Sbjct: 146 SIAGKKTFPDHAAYCGTKFAVHAISENVREEV 177

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 4/160 (2%)
Query: 5   GIGHALARAFAASDCRVVATGRSKA---TMADLEQDPRFFVQELDVLSEQSVQNVLSNVL 61
           GIG A+A   A    +V+ T  S++    ++D   D       L+V + +S++ VL  + 
Sbjct: 20  GIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGXA-LNVTNPESIEAVLKAIT 78
Query: 62  EKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
           ++FG +D+LVNNAG+     L             TN+    RL +AV+     +++G+II
Sbjct: 79  DEFGGVDILVNNAGITRDNLLXRXKEEEWSDIXETNLTSIFRLSKAVLRGXXKKRQGRII 138
Query: 122 NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           NVGSV           Y A+KA +   T +   E+   G+
Sbjct: 139 NVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVASRGV 178

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 6/159 (3%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           GIG  L RA+   + RVVAT RS    AD    P       D+   ++   ++   +E+F
Sbjct: 39  GIGAGLVRAYRDRNYRVVATSRSIKPSAD----PDIHTVAGDISKPETADRIVREGIERF 94
Query: 65  GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG 124
           G+ID LVNNAGV    P  E      +     NV G   + Q        +  G I+++ 
Sbjct: 95  GRIDSLVNNAGVFLAKPFVEXTQEDYDHNLGVNVAGFFHITQRAAAEXLKQGSGHIVSIT 154
Query: 125 SVTVAAP--GPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +  V  P  G  +   + +K  L+++T +L  E    G+
Sbjct: 155 TSLVDQPXVGXPSALASLTKGGLNAVTRSLAXEFSRSGV 193

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 59/121 (48%)
Query: 41  FVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFG 100
           F  + +V     V+ ++  V+ +FG +DVLVNNAG+     L  +     +   +TN+ G
Sbjct: 63  FAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKG 122
Query: 101 PMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG 160
               +Q   P M  ++ G IIN+ SV  A   P    Y A+KA +  LT +   EL   G
Sbjct: 123 VFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRG 182
Query: 161 I 161
           I
Sbjct: 183 I 183

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 6/166 (3%)
Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDP------RFFVQELDVLSEQSVQN 55
           S  G+G A+A         +V  G   +T  D   +          V + DV + + V+N
Sbjct: 13  SSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVEN 72
Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
           ++   ++ FG+ID+LVNNAG+     + ++     +   NTN+       +AV   M  +
Sbjct: 73  MVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQ 132
Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           K GKIIN+ S+           Y ASKA L   T ++  E    GI
Sbjct: 133 KSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGI 178

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 67.0 bits (162), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 14/155 (9%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLE-QDP---RFFVQELDVLSEQSVQNVLSNV 60
           GIG A+A  F     +V+          DL   DP   ++   E DV +   V+  + ++
Sbjct: 26  GIGRAIAERFVDEGSKVI----------DLSIHDPGEAKYDHIECDVTNPDQVKASIDHI 75
Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
            +++G I VLVNNAG++  G +  + +    +  + N+FG     +  +P+M   +   I
Sbjct: 76  FKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSI 135
Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
           +N+ SV  +     A  Y  SK A+  LT ++ L+
Sbjct: 136 VNISSVQASIITKNASAYVTSKHAVIGLTKSIALD 170

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 67.0 bits (162), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 73/169 (43%), Gaps = 18/169 (10%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQEL------------DVLSEQS 52
           GIG A+A   A     VV         A  EQ     V E+            DV + + 
Sbjct: 15  GIGRAIAIDLAKQGANVVVN------YAGNEQKANEVVDEIKKLGSDAIAVRADVANAED 68
Query: 53  VQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM 112
           V N++   ++ FG++D+LVNNAGV     L  +     +   NTN+ G     +AV   M
Sbjct: 69  VTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFM 128
Query: 113 AYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             ++ G+I+N+ SV      P    Y A+KA +  LT T   EL    I
Sbjct: 129 MRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNI 177

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 14/155 (9%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLE-QDP---RFFVQELDVLSEQSVQNVLSNV 60
           GIG A+A  F     +V+          DL   DP   ++   E DV +   V+  + ++
Sbjct: 19  GIGRAIAERFVDEGSKVI----------DLSIHDPGEAKYDHIECDVTNPDQVKASIDHI 68
Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
            +++G I VLVNNAG++  G +  + +    +  + N+FG     +  +P+M   +   I
Sbjct: 69  FKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSI 128
Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
           +N+ SV  +     A  Y  SK A+  LT ++ L+
Sbjct: 129 VNISSVQASIITKNASAYVTSKHAVIGLTKSIALD 163

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 66.6 bits (161), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 2/157 (1%)
Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMADL--EQDPRFFVQELDVLSEQSVQNVLSN 59
           + GG+G A+ARA  A    V   G  +  + +L  E   R FV   ++   ++V+ +   
Sbjct: 15  ATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGERIFVFPANLSDREAVKALGQK 74
Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
             E+ G +D+LVNNAG+   G    +     +     N+     L + +   M  R+ G+
Sbjct: 75  AEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVFNLTRELTHPMMRRRNGR 134
Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
           IIN+ S+      P    Y ASKA L   + +L  E+
Sbjct: 135 IINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEI 171

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 66.6 bits (161), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 74/162 (45%), Gaps = 7/162 (4%)
Query: 5   GIGHALARAFAASDCRV-----VATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSN 59
           GIG A+A  FA     +     V    ++A + +L +  R    + DV     V+     
Sbjct: 18  GIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGR--RVLTVKCDVSQPGDVEAFGKQ 75
Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
           V+  FG+ D+LVNNAG+  + P  E+     ++TF  NV     + +A VP M     G+
Sbjct: 76  VISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGR 135
Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           IIN+ S T          Y ++KAA    T  L  +LG  GI
Sbjct: 136 IINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGI 177

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 7/167 (4%)
Query: 2   SQGGIGHALARAFAASDCRVVATG-------RSKATMADLEQDPRFFVQELDVLSEQSVQ 54
           S  GIG A+AR  A +   +V  G       R+                  D      + 
Sbjct: 33  STSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADXTKPSEIA 92
Query: 55  NVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY 114
           +  + V ++FG  D+LVNNAGVQ V  + + P+   ++    N+      ++  +P    
Sbjct: 93  DXXAXVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPXKK 152
Query: 115 RKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +  G+IIN+ S       P+   Y A+K  +  LT T+ LE+   G+
Sbjct: 153 KGWGRIINIASAHGLVASPFKSAYVAAKHGIXGLTKTVALEVAESGV 199

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 2/157 (1%)
Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMADL--EQDPRFFVQELDVLSEQSVQNVLSN 59
           + GG+G A+ARA  A    V   G  +  + +L  E   R FV   ++   ++V+ +   
Sbjct: 18  ATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGERIFVFPANLSDREAVKALGQK 77
Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
             E+ G +D+LVNNAG+   G    +     +     N+     L + +   M  R+ G+
Sbjct: 78  AEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVFNLTRELTHPMMRRRNGR 137
Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
           IIN+ S+      P    Y ASKA L   + +L  E+
Sbjct: 138 IINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEI 174

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 83/178 (46%), Gaps = 24/178 (13%)
Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMADL----------EQDPRFFVQELDVLSEQ 51
           S  GIG A A  FA    +V  TGR    + +           EQ+    V   DV ++ 
Sbjct: 14  SSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVA--DVTTDA 71
Query: 52  SVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEV----PLSAMEQTFNTNVFGPMRLVQA 107
               +LS  L KFGK+D+LVNNAG       ++      + + + T N N+   + L + 
Sbjct: 72  GQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKK 131
Query: 108 VVPHMAYRKKGKIINVGSVTV---AAPG-PWAGTYTASKAALHSLTDTLRLELGHFGI 161
            VPH++   KG+I+N+ S+     A P  P+   Y+ +KAA+   T    ++L   GI
Sbjct: 132 AVPHLS-STKGEIVNISSIASGLHATPDFPY---YSIAKAAIDQYTRNTAIDLIQHGI 185

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 66.2 bits (160), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 6/164 (3%)
Query: 4   GGIGHALARAFAASDCRVVATGRSKAT------MADLEQDPRFFVQELDVLSEQSVQNVL 57
           GG+G A++R    +   V  +   +        M + +    F    +DV   +S +   
Sbjct: 35  GGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCA 94
Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             VL  FGK+DVL+NNAG+       ++     +    T++     + +  +  M  R+ 
Sbjct: 95  EKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRF 154
Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G+I+N+GSV  +        Y ++KA +H  T TL LE    GI
Sbjct: 155 GRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGI 198

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 5   GIGHALARAFAASDCRVV-------ATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVL 57
           GIG A+A A+A +   +V          R  A       +   +V   DV  E  +Q ++
Sbjct: 45  GIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYV--CDVTDEDGIQAMV 102
Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
           + +  + G ID+LVNNAG+    P+ E+  +   Q  + ++  P  + +AV+P M  +  
Sbjct: 103 AQIESEVGIIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIVSKAVIPSMIKKGH 162
Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           GKIIN+ S+           Y A+K  L  LT  +  E G   I
Sbjct: 163 GKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANI 206

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 72/158 (45%), Gaps = 6/158 (3%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVLSN 59
           GIG A+AR   +   RVV T R    +  +E++             D+    ++    + 
Sbjct: 40  GIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATG 99
Query: 60  VLEKFGKIDVLVNNAGVQCVG-PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
           VL   G+ DVLVNNAGV   G PL  +  +  +     N+  P  L++A  P M   K+G
Sbjct: 100 VLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRG 159
Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
            IIN+ S+    P      YTASK  L+ L  +   EL
Sbjct: 160 HIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEEL 197

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 76/163 (46%), Gaps = 6/163 (3%)
Query: 5   GIGHALARAFAASDCRVVATGRSKA------TMADLEQDPRFFVQELDVLSEQSVQNVLS 58
           GIG A+A   AA+  +V     S A        A        F  + DV  E  V+ + +
Sbjct: 39  GIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFA 98
Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
            V+E++G++DVLVNNAG+     L  +     +   + N+ G     +A    M  ++ G
Sbjct: 99  AVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSG 158
Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +IIN+ SV      P    Y+A+KA +  LT T+  EL   GI
Sbjct: 159 RIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGI 201

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/167 (34%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 5   GIGHALARAFAASDCRVVATGRSK----ATMADLE------QDPRFFVQELDVLSEQSVQ 54
           GIG A A+ F A   RV  TGR K    A +A++       Q     + ELD L E+   
Sbjct: 40  GIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEK--- 96
Query: 55  NVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY 114
                V  + G+IDVL  NAG     PL EV     + TF+ NV G +  VQ  +P +A 
Sbjct: 97  -----VKAEAGRIDVLFVNAGGGSXLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLA- 150
Query: 115 RKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            +   ++  GS   +   P    Y ASKAAL S      L+L   GI
Sbjct: 151 -RGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGI 196

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 69/160 (43%), Gaps = 15/160 (9%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQEL--------DVLSEQSVQNV 56
           GIG A AR   A   RV         MA  E+  +    EL        DV  E      
Sbjct: 16  GIGEATARLLHAKGYRV-------GLMARDEKRLQALAAELEGALPLPGDVREEGDWARA 68
Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
           ++ + E FG++  LVNNAGV  + P+ E+ L       +TN+ G    ++  VP +  R 
Sbjct: 69  VAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG 128
Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
            G I+NVGS+    P      Y ASK  L  L     L+L
Sbjct: 129 GGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDL 168

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 6/161 (3%)
Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQEL----DVLSEQSVQN 55
           S  GIG A+A  FA     +V   R    + +  +    +F V+ L    DV + + V  
Sbjct: 15  SSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDA 74
Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
           V+ +V   FG  D+LVNNAG      + E      +  +  +V   +RL + +VP M  R
Sbjct: 75  VVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELHVMAAVRLARGLVPGMRAR 134
Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
             G II+  S+    P  +   Y  +KAAL   + TL  E+
Sbjct: 135 GGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEV 175

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 9/155 (5%)
Query: 12  RAFAASDCRVVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVL 70
           RAF  S  RVV   + ++    LEQ+ P       DV  E  V+ ++S  + +FG++D +
Sbjct: 27  RAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV 86
Query: 71  VNNAGVQCVGPLAEVPLSAMEQTFNT----NVFGPMRLVQAVVPHMAYRKKGKIINVGSV 126
           VNNAG     P  + P     Q F      N+ G   L +  +P++  + +G +IN+ S+
Sbjct: 87  VNNAGHH---PPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYL-RKSQGNVINISSL 142
Query: 127 TVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             A     A  Y A+K A+ ++T  L L+   +G+
Sbjct: 143 VGAIGQAQAVPYVATKGAVTAMTKALALDESPYGV 177

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 56/121 (46%)
Query: 41  FVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFG 100
           F  + +V     V+  +  V+ +FG +DVLVNNAG+     L        +   +TN+ G
Sbjct: 57  FAIQANVADADEVKAXIKEVVSQFGSLDVLVNNAGITRDNLLXRXKEQEWDDVIDTNLKG 116
Query: 101 PMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG 160
               +Q   P    ++ G IIN+ SV  A   P    Y A+KA +  LT +   EL   G
Sbjct: 117 VFNCIQKATPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRG 176
Query: 161 I 161
           I
Sbjct: 177 I 177

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 18/155 (11%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD----------PRFFVQELDVLSEQSVQ 54
           GIG A A  FA +   VV        +AD+ +D           + F   +DV S +  +
Sbjct: 38  GIGRATAELFAKNGAYVV--------VADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAE 89
Query: 55  NVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY 114
           + +     K+G++DVLVNNAG    G +  +P    ++  + NV G     + V+P    
Sbjct: 90  SXVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIXSVNVKGIFLCSKYVIPVXRR 149
Query: 115 RKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLT 149
              G IIN  S T  +       Y ASK A+ SLT
Sbjct: 150 NGGGSIINTTSYTATSAIADRTAYVASKGAISSLT 184

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 77/166 (46%), Gaps = 20/166 (12%)
Query: 11  ARAFAASDCRVVATGRSKATMAD-LEQDPRFFVQ---------ELDVLSEQSVQNVLSNV 60
           AR   AS  R +    +K    D L+++ +              LDV      +  +   
Sbjct: 16  ARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTA 75
Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
           +  FG + VLVNNAG+  +G + +  L+  ++  + N+ G    ++AVV  M    +G I
Sbjct: 76  VTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSI 135
Query: 121 INVGSV-----TVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           IN+ S+     TVA  G     YTA+K A+  LT +  LELG  GI
Sbjct: 136 INISSIEGLAGTVACHG-----YTATKFAVRGLTKSTALELGPSGI 176

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 5/151 (3%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           GIG A+  A      +VV+    + +  D+     F   ++DV +E+ V+  +    +K+
Sbjct: 25  GIGLAVVDALVRYGAKVVSVSLDEKS--DVNVSDHF---KIDVTNEEEVKEAVEKTTKKY 79
Query: 65  GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG 124
           G+ID+LVNNAG++   PL   P     +  + NV G   + +  +P M     G IIN+ 
Sbjct: 80  GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIA 139
Query: 125 SVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
           SV   A    A  Y  SK AL  LT ++ ++
Sbjct: 140 SVQSYAATKNAAAYVTSKHALLGLTRSVAID 170

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 15/161 (9%)
Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           GIG A+A   AA   +V+ T  S    +A    L  + +  +  L+V    S+++VL  +
Sbjct: 16  GIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLM--LNVTDPASIESVLEKI 73
Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
             +FG++D+LVNNAG+     L  +          TN+    RL +AV+  M  ++ G+I
Sbjct: 74  RAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRI 133
Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           I +G             Y A+KA L   + +L  E+   GI
Sbjct: 134 ITIGG---------QANYAAAKAGLIGFSKSLAREVASRGI 165

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 6/161 (3%)
Query: 2   SQGGIGHALARAFAASDCRVVATGRS--KATMADLEQDPRFFVQ----ELDVLSEQSVQN 55
           S  GIG A+A   A++   V+ TG S  +A     E   ++ V+    E+++LSE+S+  
Sbjct: 15  STRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINK 74
Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
               +      ID+LVNNAG+        + L   E+    N+ G   + Q  +  M  +
Sbjct: 75  AFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQ 134
Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
           + G+I+N+ SV           Y+ +KA L   T +L  EL
Sbjct: 135 RWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKEL 175

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEK 63
           GIG    +A  AS  +VVA  R+ + +  L ++ P      +D+    + +  L  +   
Sbjct: 18  GIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGI--- 74
Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIIN 122
            G +D+LVNNA +  + P  EV   A +++F+ N+    ++ Q V   M  R   G I+N
Sbjct: 75  -GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVN 133
Query: 123 VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG 157
           V S+      P   TY+++K A+  LT  + +ELG
Sbjct: 134 VSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELG 168

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 75/163 (46%), Gaps = 14/163 (8%)
Query: 5   GIGHALARAFAAS-----DCRVVATGRSKATMADLEQDPRFFVQE--------LDVLSEQ 51
           GIG A+A  FA +     D   V    S+ T ADLE+       E         D+    
Sbjct: 13  GIGRAIALEFARAARHHPDFEPVLVLSSR-TAADLEKISLECRAEGALTDTITADISDMA 71
Query: 52  SVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH 111
            V+ + ++++E++G ID LVNNAGV   G L+++     + T NTN+ G   L QA+   
Sbjct: 72  DVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFAL 131
Query: 112 MAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL 154
           M  +  G I  + SV        +  Y  SK     L +T+RL
Sbjct: 132 MERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRL 174

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 63.2 bits (152), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATM---------ADLEQDPRFFVQELDVLSEQSVQN 55
           GIG  +AR       RV    R +  +         A +E D R      DV S   ++ 
Sbjct: 37  GIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR----TCDVRSVPEIEA 92
Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVP--HMA 113
           +++ V+E++G +DVLVNNAG    G  AE+          TN+ G  R+ + V+    M 
Sbjct: 93  LVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGML 152
Query: 114 YRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            R  G+I+N+ S         A  Y+ASK  +   T  L LEL   GI
Sbjct: 153 ERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 200

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 63.2 bits (152), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQEL----DVLSEQSVQN 55
           S  GIG A+A  FA     +V   R    + +  +    +F V+ L    DV + + V  
Sbjct: 15  SSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDA 74
Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
           V+ +V   FG  D+LVNNAG      + E      +  +   V   +RL + +VP M  R
Sbjct: 75  VVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRAR 134
Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
             G II+  S+    P  +   Y  +KAAL   + TL  E+
Sbjct: 135 GGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEV 175

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 63.2 bits (152), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 78/174 (44%), Gaps = 27/174 (15%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATM---------ADLEQDPRFFVQELDVLSEQSVQN 55
           GIG  +AR       RV    R +  +         A +E D R      DV S   ++ 
Sbjct: 37  GIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR----TCDVRSVPEIEA 92
Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVP--HMA 113
           +++ V+E++G +DVLVNNAG    G  AE+          TN+ G  R+ + V+    M 
Sbjct: 93  LVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGML 152
Query: 114 YRKKGKIINVGS------VTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            R  G+I+N+ S      V  AAP      Y+ASK  +   T  L LEL   GI
Sbjct: 153 ERGTGRIVNIASTGGKQGVVHAAP------YSASKHGVVGFTKALGLELARTGI 200

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATM---------ADLEQDPRFFVQELDVLSEQSVQN 55
           GIG  +AR       RV    R +  +         A +E D R      DV S   ++ 
Sbjct: 33  GIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR----TCDVRSVPEIEA 88
Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVP--HMA 113
           +++ V+E++G +DVLVNNAG    G  AE+          TN+ G  R+ + V+    M 
Sbjct: 89  LVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGML 148
Query: 114 YRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            R  G+I+N+ S         A  Y+ASK  +   T  L LEL   GI
Sbjct: 149 ERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 196

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATM---------ADLEQDPRFFVQELDVLSEQSVQN 55
           GIG  +AR       RV    R +  +         A +E D R      DV S   ++ 
Sbjct: 17  GIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR----TCDVRSVPEIEA 72
Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVP--HMA 113
           +++ V+E++G +DVLVNNAG    G  AE+          TN+ G  R+ + V+    M 
Sbjct: 73  LVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGML 132
Query: 114 YRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            R  G+I+N+ S         A  Y+ASK  +   T  L LEL   GI
Sbjct: 133 ERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 180

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATM---------ADLEQDPRFFVQELDVLSEQSVQN 55
           GIG  +AR       RV    R +  +         A +E D R      DV S   ++ 
Sbjct: 37  GIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR----TCDVRSVPEIEA 92
Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVP--HMA 113
           +++ V+E++G +DVLVNNAG    G  AE+          TN+ G  R+ + V+    M 
Sbjct: 93  LVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGML 152
Query: 114 YRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            R  G+I+N+ S         A  Y+ASK  +   T  L LEL   GI
Sbjct: 153 ERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 200

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATM---------ADLEQDPRFFVQELDVLSEQSVQN 55
           GIG  +AR       RV    R +  +         A +E D R      DV S   ++ 
Sbjct: 33  GIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR----TCDVRSVPEIEA 88
Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVP--HMA 113
           +++ V+E++G +DVLVNNAG    G  AE+          TN+ G  R+ + V+    M 
Sbjct: 89  LVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGML 148
Query: 114 YRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            R  G+I+N+ S         A  Y+ASK  +   T  L LEL   GI
Sbjct: 149 ERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 196

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATM---------ADLEQDPRFFVQELDVLSEQSVQN 55
           GIG  +AR       RV    R +  +         A +E D R      DV S   ++ 
Sbjct: 37  GIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR----TCDVRSVPEIEA 92
Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVP--HMA 113
           +++ V+E++G +DVLVNNAG    G  AE+          TN+ G  R+ + V+    M 
Sbjct: 93  LVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGML 152
Query: 114 YRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            R  G+I+N+ S         A  Y+ASK  +   T  L LEL   GI
Sbjct: 153 ERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 200

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATM---------ADLEQDPRFFVQELDVLSEQSVQN 55
           GIG  +AR       RV    R +  +         A +E D R      DV S   ++ 
Sbjct: 37  GIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR----TCDVRSVPEIEA 92
Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVP--HMA 113
           +++ V+E++G +DVLVNNAG    G  AE+          TN+ G  R+ + V+    M 
Sbjct: 93  LVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGML 152
Query: 114 YRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            R  G+I+N+ S         A  Y+ASK  +   T  L LEL   GI
Sbjct: 153 ERGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELARTGI 200

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 62.8 bits (151), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 2   SQGGIGHALARAFAASDCRVVATGRSKA----TMADLE-QDPRFFVQEL--DVLSEQSVQ 54
           S  GIG A+A +  A    V+  GR +     T+ ++  Q P   +Q +  D+ +EQ  Q
Sbjct: 18  STAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQ 77
Query: 55  NVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY 114
           +V+    EK+ K+D+L+NN G+       ++P     + F  N+   +RL ++ +     
Sbjct: 78  DVI----EKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIXSGVRLTRSYLKKXIE 133
Query: 115 RKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTL 152
           RK+G++I + S     P      Y+A+K    SL+ +L
Sbjct: 134 RKEGRVIFIASEAAIXPSQEXAHYSATKTXQLSLSRSL 171

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 6/163 (3%)
Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           G G A AR FA +   +V TGR     +A   +L    R     LDV    +    + N+
Sbjct: 32  GFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAXSAAVDNL 91
Query: 61  LEKFGKIDVLVNNAGVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM-AYRKKG 118
            E+F  +  L+NNAG+     P     L   +   +TN+ G +   + ++P + A+    
Sbjct: 92  PEEFATLRGLINNAGLALGTDPAQSCDLDDWDTXVDTNIKGLLYSTRLLLPRLIAHGAGA 151
Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            I+N+GSV    P P +  Y  +KA +   +  LR +L   G+
Sbjct: 152 SIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGV 194

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 9/158 (5%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADL------EQDPRFFVQELDVLSEQSVQNVLS 58
           GIG A+ARA A     +    RS   +  +      EQ    F   LDV   +SV+    
Sbjct: 13  GIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSK 72
Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
            VLE+FG +DV+V NAG+     L E+      +    N+ G  R ++A +  +  ++ G
Sbjct: 73  KVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSL--KRTG 130
Query: 119 KIINVGSVTVAAPG-PWAGTYTASKAALHSLTDTLRLE 155
            +  V +  V+A   P+ G Y ++K A  +L  T ++E
Sbjct: 131 GLALVTTSDVSARLIPYGGGYVSTKWAARALVRTFQIE 168

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 9/158 (5%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADL------EQDPRFFVQELDVLSEQSVQNVLS 58
           GIG A+ARA A     +    RS   +  +      EQ    F   LDV   +SV+    
Sbjct: 35  GIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSK 94
Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
            VLE+FG +DV+V NAG+     L E+      +    N+ G  R ++A +  +  ++ G
Sbjct: 95  KVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSL--KRTG 152
Query: 119 KIINVGSVTVAAPG-PWAGTYTASKAALHSLTDTLRLE 155
            +  V +  V+A   P+ G Y ++K A  +L  T ++E
Sbjct: 153 GLALVTTSDVSARLIPYGGGYVSTKWAARALVRTFQIE 190

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 68/157 (43%), Gaps = 6/157 (3%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           GIG A+ARAFA +  +V  T RS       E    F   + D+   + V+     + E  
Sbjct: 32  GIGLAIARAFADAGDKVAITYRSG------EPPEGFLAVKCDITDTEQVEQAYKEIEETH 85
Query: 65  GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG 124
           G ++VL+ NAGV     L  +          TN+ G  R+V+     M   KKG+++ + 
Sbjct: 86  GPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLIS 145
Query: 125 SVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           SV           Y ASKA L     +L  ELG   I
Sbjct: 146 SVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNI 182

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQE--------LDVLSEQSVQNV 56
           GIG A+A   A     V+ T     T A  E     F Q         L+V    +V  +
Sbjct: 39  GIGRAIALELARRGAMVIGT---ATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDAL 95
Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
           + + L++FG ++VLVNNAG+        +     +   +TN+    RL +AV+  M   +
Sbjct: 96  VESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR 155
Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            G+I+N+ SV  +A  P    Y A+KA +  +T  L  E+G  GI
Sbjct: 156 GGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGI 200

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 9/161 (5%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFF--VQEL--DVLSEQSVQNVLSNV 60
           GIG  +A+    +  RV    R     AD       +   Q +  D+ SE   + +   +
Sbjct: 40  GIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQAL 99
Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM----AYRK 116
            E   ++D+LVNNAG      L   P+S  E+    NV      +Q ++P +    +   
Sbjct: 100 GELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAEN 159
Query: 117 KGKIINVGSVT-VAAPGPWAGTYTASKAALHSLTDTLRLEL 156
             ++IN+GSV  ++A G  A  Y  SKAALH L+  L  EL
Sbjct: 160 PARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKEL 200

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 69/156 (44%), Gaps = 14/156 (8%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           GIG A+A+  AA   +V  T R       L      F  E DV    +V    + V E  
Sbjct: 26  GIGLAIAQRLAADGHKVAVTHRGSGAPKGL------FGVECDVTDSDAVDRAFTAVEEHQ 79
Query: 65  GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG 124
           G ++VLV+NAG+     L  +     E+  N N+ G  R+ Q     M   K G++I +G
Sbjct: 80  GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIG 139
Query: 125 SVTVAAPGPWA----GTYTASKAALHSLTDTLRLEL 156
           SV+    G W       Y ASKA +  +  ++  EL
Sbjct: 140 SVS----GSWGIGNQANYAASKAGVIGMARSIAREL 171

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 5/162 (3%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQEL-----DVLSEQSVQNVLSN 59
           GIG  +A+  A S   V+   R++ +   +  + + F  E      DV  ++ +  V++ 
Sbjct: 55  GIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINK 114
Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
           +L +   +D+LVNNAG+        +     E    TN+     + Q +   M   + G+
Sbjct: 115 ILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGR 174
Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           IIN+ S+           Y++SKA +   T +L  EL    I
Sbjct: 175 IINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNI 216

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 70/156 (44%), Gaps = 14/156 (8%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           GIG A+A+  AA   +V  T R       L      F  E+DV    +V    + V E  
Sbjct: 26  GIGLAIAQRLAADGHKVAVTHRGSGAPKGL------FGVEVDVTDSDAVDRAFTAVEEHQ 79
Query: 65  GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG 124
           G ++VLV+NAG+     L  +     E+  N N+ G  R+ Q     M   K G++I +G
Sbjct: 80  GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIG 139
Query: 125 SVTVAAPGPWA----GTYTASKAALHSLTDTLRLEL 156
           SV+    G W       Y ASKA +  +  ++  EL
Sbjct: 140 SVS----GLWGIGNQANYAASKAGVIGMARSIAREL 171

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQEL----DVLSEQSVQNVL 57
           S  GIG  +A+  A +   +V  G      A L +  R  V+ +    D+     ++ + 
Sbjct: 12  STSGIGLGIAQVLARAGANIVLNGFGDPAPA-LAEIARHGVKAVHHPADLSDVAQIEALF 70
Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
           +    +FG +D+LVNNAG+Q V P+ + PL + ++    N+       +  +P M  R  
Sbjct: 71  ALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNW 130
Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
           G+IIN+ SV           Y A+K  +  LT  + LE
Sbjct: 131 GRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLE 168

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 5/162 (3%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPR---FFVQEL--DVLSEQSVQNVLSN 59
           GIG  +A A A+    VV T  S+A+    E   +   F  + L  ++   +S+QN  + 
Sbjct: 16  GIGFEVAHALASKGATVVGTATSQASAEKFENSXKEKGFKARGLVLNISDIESIQNFFAE 75
Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
           +  +   ID+LVNNAG+              +   NTN+    R  +  V     ++ G+
Sbjct: 76  IKAENLAIDILVNNAGITRDNLXXRXSEDEWQSVINTNLSSIFRXSKECVRGXXKKRWGR 135
Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           II++GSV  +A  P    Y A+KA +   + +L  E+    I
Sbjct: 136 IISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNI 177

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 11/167 (6%)
Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLE------QDPRFFVQELDVLSEQSVQ 54
           GIG A+ +        VV   R     K+   +L+      +  R    + ++ +E+ V 
Sbjct: 29  GIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVN 88
Query: 55  NVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY 114
           N++ + L+ FGKI+ LVNN G Q + P   +          TN+ G   + +AV      
Sbjct: 89  NLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMK 148
Query: 115 RKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
              G I+N+  V   A  P A    A++A +++LT +L LE    GI
Sbjct: 149 EHGGSIVNI-IVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGI 194

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 35  EQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTF 94
           EQ  R   ++ DV    S+Q V+   L +FG ID+LV+N G+   G +  +         
Sbjct: 104 EQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDIL 163
Query: 95  NTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG-PWAGTYTASKAALHSLTDTLR 153
            TN+ G     +AV+P M  R +G  +   S TV   G P    Y ASK  +  L  +L 
Sbjct: 164 QTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSLA 223
Query: 154 LELGHFGI 161
            E+G   I
Sbjct: 224 NEVGRHNI 231

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 73/162 (45%), Gaps = 5/162 (3%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQE-----LDVLSEQSVQNVLSN 59
           GIG A+A         V+ T  S +    + +  +    E     LDV S++SV   L +
Sbjct: 38  GIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSSDESVAATLEH 97
Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
           + +  G+  ++VNNAG+     L  +         NTN+    RL +AV+  M   + G+
Sbjct: 98  IQQHLGQPLIVVNNAGITRDNLLVRMKDDEWFDVVNTNLNSLYRLSKAVLRGMTKARWGR 157
Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           IIN+GSV  A        Y A+KA L   T  L  E+G   I
Sbjct: 158 IINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAI 199

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 70/159 (44%), Gaps = 7/159 (4%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATM----ADLEQ--DPRFFVQELDVLSEQSVQNVLS 58
           GIG  +A  FA +   V   GRS A +    ADL+Q    +    + DV        +  
Sbjct: 21  GIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAG 80
Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
             +E+FG IDV+  NAGV    PLA +    +   F  NV G    VQA +  +     G
Sbjct: 81  RAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSG 140
Query: 119 KIINVGSVTVAAPG-PWAGTYTASKAALHSLTDTLRLEL 156
           +++   S+T    G P    Y A+KAA      T  +EL
Sbjct: 141 RVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIEL 179

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 72/169 (42%), Gaps = 11/169 (6%)
Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ---------DPRFFVQELDVLSEQS 52
           S  GIG  +A A AA    +V  G   A  A++E+           +      D+   ++
Sbjct: 12  STSGIGLGIATALAAQGADIVLNGFGDA--AEIEKVRAGLAAQHGVKVLYDGADLSKGEA 69
Query: 53  VQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM 112
           V+ ++ N + + G+ID+LVNNAG+Q    + + P    +     N+        A +PHM
Sbjct: 70  VRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHM 129
Query: 113 AYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             +  G+IIN+ S            Y A+K  +   T    LE    GI
Sbjct: 130 KKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGI 178

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 72/169 (42%), Gaps = 11/169 (6%)
Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ---------DPRFFVQELDVLSEQS 52
           S  GIG  +A A AA    +V  G   A  A++E+           +      D+   ++
Sbjct: 12  STSGIGLGIATALAAQGADIVLNGFGDA--AEIEKVRAGLAAQHGVKVLYDGADLSKGEA 69
Query: 53  VQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM 112
           V+ ++ N + + G+ID+LVNNAG+Q    + + P    +     N+        A +PHM
Sbjct: 70  VRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHM 129
Query: 113 AYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             +  G+IIN+ S            Y A+K  +   T    LE    GI
Sbjct: 130 KKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGI 178

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEK 63
           GIG    +A  A+  RVVA  R++A +  L ++ P      +D+   ++ +  L +V   
Sbjct: 18  GIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSV--- 74
Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIIN 122
            G +D+LVNNA V  + P  EV   A +++F  N+   +++ Q V   +  R   G I+N
Sbjct: 75  -GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVN 133
Query: 123 VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG 157
           V S            Y ++K AL  LT  + LELG
Sbjct: 134 VSSQXSQRAVTNHSVYCSTKGALDMLTKVMALELG 168

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 60.8 bits (146), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEK 63
           GIG    +A  A+  RVVA  R++A +  L ++ P      +D+   ++ +  L +V   
Sbjct: 18  GIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSV--- 74
Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIIN 122
            G +D+LVNNA V  + P  EV   A +++F  N+   +++ Q V   +  R   G I+N
Sbjct: 75  -GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVN 133
Query: 123 VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG 157
           V S            Y ++K AL  LT  + LELG
Sbjct: 134 VSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELG 168

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 60.8 bits (146), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 20/166 (12%)
Query: 11  ARAFAASDCRVVATGRSKATMAD-LEQDPRFFVQ---------ELDVLSEQSVQNVLSNV 60
           AR   AS  R      +K    D L+++ +              LDV      +  +   
Sbjct: 16  ARGXGASHVRAXVAEGAKVVFGDILDEEGKAXAAELADAARYVHLDVTQPAQWKAAVDTA 75
Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
           +  FG + VLVNNAG+  +G + +  L+  ++  + N+ G    ++AVV       +G I
Sbjct: 76  VTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPXKEAGRGSI 135
Query: 121 INVGSV-----TVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           IN+ S+     TVA  G     YTA+K A+  LT +  LELG  GI
Sbjct: 136 INISSIEGLAGTVACHG-----YTATKFAVRGLTKSTALELGPSGI 176

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 60.8 bits (146), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 72/169 (42%), Gaps = 11/169 (6%)
Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ---------DPRFFVQELDVLSEQS 52
           S  GIG  +A A AA    +V  G   A  A++E+           +      D+   ++
Sbjct: 12  STSGIGLGIATALAAQGADIVLNGFGDA--AEIEKVRAGLAAQHGVKVLYDGADLSKGEA 69
Query: 53  VQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM 112
           V+ ++ N + + G+ID+LVNNAG+Q    + + P    +     N+        A +PHM
Sbjct: 70  VRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHM 129
Query: 113 AYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             +  G+IIN+ S            Y A+K  +   T    LE    GI
Sbjct: 130 KKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGI 178

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 6/157 (3%)
Query: 4   GGIGHALARAFAASDCRVVATG----RSKATMADLEQDPRFFVQELDVLSEQSVQNVLSN 59
           GGIG A+AR F A    V   G    + K   ADL +D   FV   ++   +S++ +   
Sbjct: 37  GGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKD--VFVFSANLSDRKSIKQLAEV 94
Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
              +   ID+LVNNAG+   G    +     +     N+     L + ++  M  R+ G+
Sbjct: 95  AEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGR 154
Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
           IIN+ S+      P    Y A+KA L   +  L  E+
Sbjct: 155 IINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEI 191

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 73/158 (46%), Gaps = 3/158 (1%)
Query: 2   SQGGIGHALARAFAASDCRVVATGRS--KATMADLEQDPRFFVQELDVLSEQSVQNVLSN 59
           S  GIG A A A+      V        +A  A  E  P  +  + DV  + S+   ++ 
Sbjct: 16  SARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQXDVTRQDSIDAAIAA 75
Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPM-RLVQAVVPHMAYRKKG 118
            +E  G +D+LVNNA +  + P+ E+   + E+ F  NV G +  L  A    +A  + G
Sbjct: 76  TVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQXIAQGRGG 135
Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
           KIIN  S            Y A+KAA+ SLT +  L+L
Sbjct: 136 KIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDL 173

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 5   GIGHALARAFAASDCRVVATGRS--------KATMADLEQDPRFFVQELDVLSEQSVQNV 56
           G+G  +     A    V  T  S        K T  D+E+  +F   + DV  ++ +  +
Sbjct: 18  GLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFV--QADVTKKEDLHKI 75
Query: 57  LSNVLEKFGKIDVLVNNAG--VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY 114
           +   +  FGKID L+NNAG  V     L +       +    N+     L++ VVP M  
Sbjct: 76  VEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRK 135
Query: 115 RKKGKIINVG-SVTVAAPG-PWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +  G+IIN G     +APG  +   + A+K  L SLT T+  E   +GI
Sbjct: 136 QNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGI 184

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 60.1 bits (144), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 6/157 (3%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMAD--LEQDPRFFVQEL----DVLSEQSVQNVLS 58
           GIG A+A +   + C+V+      A  A+   +Q   +  Q +    DV  E  V+ ++ 
Sbjct: 12  GIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMK 71
Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
             ++ +G IDV+VNNAG+     L  +  S  ++  + N+ G     QA    M  ++KG
Sbjct: 72  TAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKG 131
Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
           +IIN+ SV           Y A+KA +   + T   E
Sbjct: 132 RIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAARE 168

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 60.1 bits (144), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 13/160 (8%)
Query: 5   GIGHALARAF-------AASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVL 57
           GIG A+ARA        A +D  V+A   ++A +A LE     F  E+DV    SV   +
Sbjct: 23  GIGAAIARALDKAGATVAIADLDVMA---AQAVVAGLENGG--FAVEVDVTKRASVDAAM 77
Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH-MAYRK 116
              ++  G  D+L  NAGV  + P  ++     +  F+ N  G     Q    H +A   
Sbjct: 78  QKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNT 137
Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
           KG I+N  S+      P    Y+ASK A+   T  L  E+
Sbjct: 138 KGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREM 177

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 59.7 bits (143), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 4/154 (2%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLE 62
           G G A  R        V+ TGR+++ +A + ++  PR      D+     +  + +   +
Sbjct: 19  GXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQ 78
Query: 63  KFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIIN 122
             G ID+L  NAGV  + P  +V  ++ ++ F  N  G    VQ + P +  R+ G I+ 
Sbjct: 79  TLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLI--REGGSIVF 136
Query: 123 VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
             SV      P    Y+ASKAAL S    L  EL
Sbjct: 137 TSSVADEGGHPGXSVYSASKAALVSFASVLAAEL 170

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 59.7 bits (143), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 4/154 (2%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLE 62
           G G A  R        V+ TGR+++ +A + ++  PR      D+     +  + +   +
Sbjct: 18  GXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQ 77
Query: 63  KFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIIN 122
             G ID+L  NAGV  + P  +V  ++ ++ F  N  G    VQ + P +  R+ G I+ 
Sbjct: 78  TLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLI--REGGSIVF 135
Query: 123 VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
             SV      P    Y+ASKAAL S    L  EL
Sbjct: 136 TSSVADEGGHPGXSVYSASKAALVSFASVLAAEL 169

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 69/151 (45%), Gaps = 8/151 (5%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           GIG A+A  FA     VVA G   A      + PR   +ELD+   Q +Q +     E  
Sbjct: 22  GIGAAIAMQFAELGAEVVALG-LDADGVHAPRHPRIRREELDITDSQRLQRLF----EAL 76
Query: 65  GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG 124
            ++DVLVNNAG+       E  L+  E+    N+   M   Q   P +A R  G I+N+ 
Sbjct: 77  PRLDVLVNNAGIS--RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR-GGSILNIA 133
Query: 125 SVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
           S+           Y+ASK A+  LT +L  E
Sbjct: 134 SMYSTFGSADRPAYSASKGAIVQLTRSLACE 164

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 69/156 (44%), Gaps = 14/156 (8%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           GIG A+A+  AA   +V  T R       L      F  E+DV    +V    + V E  
Sbjct: 46  GIGLAIAQRLAADGHKVAVTHRGSGAPKGL------FGVEVDVTDSDAVDRAFTAVEEHQ 99
Query: 65  GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG 124
           G ++VLV+NAG+     L  +     E+  N N+ G  R+ Q     M   K G++I + 
Sbjct: 100 GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIA 159
Query: 125 SVTVAAPGPWA----GTYTASKAALHSLTDTLRLEL 156
           SV+    G W       Y ASKA +  +  ++  EL
Sbjct: 160 SVS----GLWGIGNQANYAASKAGVIGMARSIAREL 191

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 70/165 (42%), Gaps = 9/165 (5%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD---PRFFVQE-----LDVLSEQSVQNV 56
           GIG  +A   A    RVV   RSK  +  +  +       VQE     LD+         
Sbjct: 18  GIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEPIVLPLDITDCTKADTE 77
Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
           + ++ +K+G +D+LVN A     G L+E P+    +    NV     +++ V      +K
Sbjct: 78  IKDIHQKYGAVDILVNAAAXFXDGSLSE-PVDNFRKIXEINVIAQYGILKTVTEIXKVQK 136
Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            G I NV S          G Y ++K AL  L ++L  EL   GI
Sbjct: 137 NGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGI 181

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 71/170 (41%), Gaps = 13/170 (7%)
Query: 5   GIGHALARAFAASDCRV-VATGRSKA---TMADLEQD---PRFFVQELDVLSEQSVQNVL 57
           G+G  L R      C+V +A  R  +    +A LE +   P     +LDV S +  +   
Sbjct: 19  GVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAA 78
Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-- 115
             V  +FG + +L NNAGV    P+ E      +     N+ G +  V   VP M  R  
Sbjct: 79  DEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVK 138
Query: 116 ----KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
               K G ++N  S+         G Y  +K A+  L+++L   L  + I
Sbjct: 139 AGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEI 188

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 7/167 (4%)
Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ---DPRFFVQEL----DVLSEQSVQ 54
           S  GIG A+A   A +   VV  G  +    + E+   + +F V+      D+   Q+ +
Sbjct: 12  STSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYYLNADLSDAQATR 71
Query: 55  NVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY 114
           + ++   E  G +D+LVNNAG+Q   P+ E P+         N+        A +P M  
Sbjct: 72  DFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTAAALPIMQK 131
Query: 115 RKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +  G+IIN+ S            Y A+K  +  LT    LE    GI
Sbjct: 132 QGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENAGKGI 178

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 4/162 (2%)
Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD-PRFFVQEL-DVLSEQSVQNVLSNVL 61
           GGIG   +R  A +  RVV     +  +A       R  V  + D+ +E SV+ ++   +
Sbjct: 21  GGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTI 80
Query: 62  EKFGKIDVLVNNAGVQCVGPL--AEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
           + FG++D++ NNA       +   ++ +   + TF  N  G M + +  +P +     G 
Sbjct: 81  DTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGA 140
Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           I+N+ S T  A    +  Y  +KAA+ +LT  +  + G  G+
Sbjct: 141 IVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGV 182

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 6/159 (3%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLE 62
           GIG A+AR       +V+ +G ++  +  L       + ++  ++ +++   N++S    
Sbjct: 25  GIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLIS---- 80
Query: 63  KFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIIN 122
           K   +D+LV NAG+        +     ++  + N+     L +  +  M  ++ G+IIN
Sbjct: 81  KTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIIN 140
Query: 123 VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           + S+   A  P    Y ASKA L  +T +L  E+   GI
Sbjct: 141 ISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGI 179

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 46  DVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLA--EVPLSAMEQTFNTNVFGPMR 103
           DV  ++ V+N++   + K GK+D++  N GV    P +  E      ++  + NV+G   
Sbjct: 72  DVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFL 131
Query: 104 LVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAG-TYTASKAALHSLTDTLRLELGHFGI 161
           + +     M   KKG I+   S++    G      YTA+K A+  LT +L  ELG +GI
Sbjct: 132 VAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGI 190

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 6/161 (3%)
Query: 2   SQGGIGHALARAFAASDCRVVATGRSKA----TMADLEQDPRFFVQEL-DVLSEQSVQNV 56
           S  GIG A+AR  A     VV + R +     T+A L+ +       +  V   +  + +
Sbjct: 22  STDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERL 81
Query: 57  LSNVLEKFGKIDVLVNNAGVQ-CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
           ++  +   G +D+LV+NA V    G + +      ++  + NV   + + +AVVP M  R
Sbjct: 82  VAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKR 141
Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
             G ++ V SV    P P  G Y  SK AL  LT  L +EL
Sbjct: 142 GGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVEL 182

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPR-------FFVQELDVLSEQSVQ 54
           + GGIG A+ARA      +VV   R+   + +L  + +             D+ +E+ + 
Sbjct: 40  ASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDIL 99
Query: 55  NVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY 114
           ++ S +  +   +D+ +NNAG+     L     S  +  FN NV       +     M  
Sbjct: 100 SMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKE 159
Query: 115 RK--KGKIINVGSVTVAAPGPWAGT--YTASKAALHSLTDTLRLEL 156
           R    G IIN+ S++     P + T  Y+A+K A+ +LT+ LR EL
Sbjct: 160 RNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQEL 205

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 12/166 (7%)
Query: 6   IGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQE-----LDVLSEQSVQNVLSNV 60
           IG A   A A +  RV+     +A      +D R    +     +DV + +SVQN + +V
Sbjct: 25  IGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSV 84
Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAME--QTFNTNVFGPMRLVQAVVPHMAYRKKG 118
            E+ G++D+LV  AG+ C+  +    ++  +  +  + N+ G  R  QAV   M  +K+G
Sbjct: 85  HEQEGRVDILVACAGI-CISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQG 143
Query: 119 KIINVGSVT---VAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            I+ +GS++   V  P   A  Y ASKA +H    +L  E    GI
Sbjct: 144 VIVAIGSMSGLIVNRPQQQAA-YNASKAGVHQYIRSLAAEWAPHGI 188

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 8/162 (4%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQEL--DVLSEQSVQNVLSNVLE 62
           G+G AL   F A   +V    +S   +A+LE D    V  +  DV S +  +   S  + 
Sbjct: 16  GLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVA 75
Query: 63  KFGKIDVLVNNAGV-QCVGPLAEVPL----SAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
           +FGKID L+ NAG+      L ++P     +A ++ F+ NV G +  V+A +P +    +
Sbjct: 76  RFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALV-ASR 134
Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHF 159
           G +I   S     P      YTA+K A+  L   L  EL  +
Sbjct: 135 GNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPY 176

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 7/164 (4%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELD-----VLSEQSVQNVLSN 59
           GIG A+AR  AA    V    R    ++      R    ++D     V S   V   ++ 
Sbjct: 35  GIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAA 94
Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK-- 117
            +E+FG I +LVN+AG    G  A++  +      +TN+ G  R+ + V+     R+   
Sbjct: 95  AVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGW 154
Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G+I+N+ S        +A  YTASK  +   T ++  EL   GI
Sbjct: 155 GRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGI 198

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 8/165 (4%)
Query: 4   GGIGHALARAFAASDCRVVA-TGRSKATMADLEQDPR-----FFVQELDVLSEQSVQNVL 57
           GGIG ++ +       RVVA  G +        +D +     F+  E +V    S +   
Sbjct: 23  GGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAF 82
Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             V  + G+IDVLVNNAG+       ++     +   +TN+     + + V+  M  R  
Sbjct: 83  DKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGW 142
Query: 118 GKIINVGSVTVAAPGPWAGT-YTASKAALHSLTDTLRLELGHFGI 161
           G+IIN+ SV     G +  T Y+ +KA +H  T +L  E+   G+
Sbjct: 143 GRIINISSVN-GQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGV 186

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 5/154 (3%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDP---RFFVQELDVLSEQSVQNVLSNVL 61
           G+G   A+ FA    +VV      AT    E        +  + DV  +   + ++ NV+
Sbjct: 333 GLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDS--EAIIKNVI 390
Query: 62  EKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
           +K+G ID+LVNNAG+      A++     +     ++ G   L +   P+   ++ G+II
Sbjct: 391 DKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRII 450
Query: 122 NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
           N+ S +          Y++SKA +  L+ T+ +E
Sbjct: 451 NITSTSGIYGNFGQANYSSSKAGILGLSKTMAIE 484

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 70/159 (44%), Gaps = 7/159 (4%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADL--EQDPRFFVQELDVLSEQSVQNVLSNVLE 62
           G G  +A+ FA    +VV   R KA    +  E          D+  E  V   +   L 
Sbjct: 20  GFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALS 79
Query: 63  KFGKIDVLVNNAGVQCVGPLAE-VPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGK- 119
           KFGK+D+LVNNAG+      AE V     ++    NV G   +   ++PH      KG+ 
Sbjct: 80  KFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQE 139
Query: 120 --IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
             I+NV S     P P    Y A+K  + S+T  L +EL
Sbjct: 140 CVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIEL 178

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMAD-----LEQ-DPRFFVQELDVLSEQSVQNVLS 58
           GIG A+A   A+    VV     KA  A+     +E    +    + DV    +V+ + +
Sbjct: 38  GIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFA 97
Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
              E FG +DVLVNNAG+  +  +AE   +  ++    N+ G    ++     +  R  G
Sbjct: 98  TAEEAFGGVDVLVNNAGIXPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRL--RVGG 155
Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
           +IIN  +  V    P  G Y A+KA + + T  L  EL
Sbjct: 156 RIINXSTSQVGLLHPSYGIYAAAKAGVEAXTHVLSKEL 193

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 10/138 (7%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVLSN 59
           GIG A A A AA    V A GR++  + ++  +      +    E DV  E   +N + +
Sbjct: 39  GIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQXRNAVRD 98
Query: 60  VLEKFGKIDVLVNNAGVQCV-GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
           ++ KFG +D++V NAG+  V  P+ ++     ++T   N+ G    +   VP++  R  G
Sbjct: 99  LVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGG 158
Query: 119 KIINVGSV----TVAAPG 132
            I+ V S+    T   PG
Sbjct: 159 AIVVVSSINGTRTFTTPG 176

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 13  AFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN 72
           AFA    +V+AT  +++ + +LE+ P    + LDV  ++ +    +N +E+   +DVL N
Sbjct: 25  AFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQ-FANEVER---LDVLFN 80
Query: 73  NAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG 132
            AG    G + +      + + N NV     +++A +P M  +K G IIN+ SV  +  G
Sbjct: 81  VAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG 140
Query: 133 PW-AGTYTASKAALHSLTDTLRLELGHFGI 161
                 Y+ +KAA+  LT ++  +    GI
Sbjct: 141 VVNRCVYSTTKAAVIGLTKSVAADFIQQGI 170

>pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase (Nadph) From Sinorhizobium Meliloti Length = 324

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 5   GIGHALARAFAASDCRVVAT-----GRSKATMADL-----EQDPRFFVQELDVLSEQSVQ 54
           G G   A A A +  RV A+     GR+ + +  +     + D      ELDV S+ SV 
Sbjct: 16  GFGRLTAEALAGAGHRVYASXRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVD 75
Query: 55  NVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY 114
             +  ++ + G+IDVL++NAG    GP          + ++ NV    R+ +A +PH   
Sbjct: 76  RAIDQIIGEDGRIDVLIHNAGHXVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHXRR 135
Query: 115 RKKGKIINVGSVTVA-APGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           +K G +I + S + A    P+   Y A+KAA  ++      EL  +GI+
Sbjct: 136 QKHGLLIWISSSSSAGGTPPYLAPYFAAKAAXDAIAVQYARELSRWGIE 184

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 15/172 (8%)
Query: 5   GIGHALARAFAASDCRVV-------ATGRSKATMADLEQD--------PRFFVQELDVLS 49
           G  HA+A A A +D  +          G   AT  DL +          R    ++DV  
Sbjct: 23  GRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKD 82
Query: 50  EQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVV 109
             ++++ ++   +  G ID+ + NAG+  +  L EV  +  ++   TN+ G    + AV 
Sbjct: 83  RAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVA 142
Query: 110 PHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           P M  R  G+I+ V S+   +      +Y +SK  +  LT     +L  +GI
Sbjct: 143 PGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAAHDLVGYGI 194

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 68/169 (40%), Gaps = 26/169 (15%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMA----------DLEQDPRFFVQELDVLSEQSVQ 54
           GIG A+A A  A   RV    R+    A          DLE+D                +
Sbjct: 13  GIGRAIAEALVARGYRVAIASRNPEEAAQSLGAVPLPTDLEKD--------------DPK 58
Query: 55  NVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY 114
            ++   LE  G + VLV+ A V    P  E+      +    ++     L QA  PHMA 
Sbjct: 59  GLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAE 118
Query: 115 RKKGKIINVGSVTV-AAPGPWA-GTYTASKAALHSLTDTLRLELGHFGI 161
              G+++ +GSVT   A GP     YT +K AL  LT  L  E    GI
Sbjct: 119 AGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGI 167

>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 46/90 (51%)
Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
           V    G++D++VNNAGV   G + E   +    +   NV  P R+ +A +P  A    G 
Sbjct: 88  VAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLXAAAGGGA 147
Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLT 149
           I+NV S     PGP    Y  +KAAL SLT
Sbjct: 148 IVNVASCWGLRPGPGHALYCLTKAALASLT 177

>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 8/153 (5%)
Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFV-----QEL-DVLSEQSVQN 55
           S  GIG A+A   A +   V+  G    + A ++Q  R        QEL   LSE     
Sbjct: 41  SSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQ--RIIASGGTAQELAGDLSEAGAGT 98
Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
            L    E    +D+LV NA  Q    L+ +  + +      N+   + ++Q+ +P M  R
Sbjct: 99  DLIERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVAR 158
Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSL 148
           K G+++++GS+    P      Y A+KAA H+L
Sbjct: 159 KWGRVVSIGSINQLRPKSVVTAYAATKAAQHNL 191

>pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With Unknown Function From Saccharomyces Cerevisiae Length = 254

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 6/156 (3%)
Query: 5   GIGHALARAFAASDCRVVATG--RSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNV 60
           GIG ++     + D   V  G  RS+A +  L++    RFF    D+  +  ++ +++  
Sbjct: 13  GIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAA 72
Query: 61  LEKFGKIDVLVNNAGV-QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
           ++  GKID LV NAGV + V  + E+ ++A ++ ++ N F  + LV   +P +  +  G 
Sbjct: 73  VKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELK-KTNGN 131
Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
           ++ V S          G Y +SKAAL+    TL  E
Sbjct: 132 VVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE 167

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Query: 44  ELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMR 103
           ++DV     V   +    +  G  DV+VNNAGV    P+  +    +++ +N NV G + 
Sbjct: 57  KVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIW 116
Query: 104 LVQAVVPHMAYRKK---GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG 160
            +QA V   A++K+   GKIIN  S       P    Y++SK A+  LT T   +L   G
Sbjct: 117 GIQAAVE--AFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLG 174
Query: 161 I 161
           I
Sbjct: 175 I 175

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Query: 29  ATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLS 88
           AT  +L    R+  Q LDV  E+  Q V++   E+FG +D LVNNAG+     L    + 
Sbjct: 44  ATARELGDAARY--QHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVE 101
Query: 89  AMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSL 148
              +    N+ G    ++ V+P M     G I+N+ S           +Y ASK  +  L
Sbjct: 102 RFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGL 161
Query: 149 TDTLRLELG 157
           +    +ELG
Sbjct: 162 SKLAAVELG 170

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Query: 29  ATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLS 88
           AT  +L    R+  Q LDV  E+  Q V++   E+FG +D LVNNAG+     L    + 
Sbjct: 44  ATARELGDAARY--QHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVE 101
Query: 89  AMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSL 148
              +    N+ G    ++ V+P M     G I+N+ S           +Y ASK  +  L
Sbjct: 102 RFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGL 161
Query: 149 TDTLRLELG 157
           +    +ELG
Sbjct: 162 SKLAAVELG 170

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 19/166 (11%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPR---------FFVQELDVLSEQSVQN 55
           GIG A+A+AFA     V         + DL  + +         FF  ++D+  E+    
Sbjct: 17  GIGRAIAQAFAREGALV--------ALCDLRPEGKEVAEAIGGAFF--QVDLEDERERVR 66
Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
            +       G++DVLVNNA +   G    V L    +    N+  PM L       M   
Sbjct: 67  FVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV 126
Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             G I+NV SV           Y ASK  L +LT +L L+L    I
Sbjct: 127 GGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRI 172

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 2/154 (1%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEK 63
           GIG  +   F  +  +V      +   AD  ++ P  F    DV    +++  +   +EK
Sbjct: 13  GIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEK 72
Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
             +IDVLVNNA     G L+ +     +   +  +  P  L +     +  + KG+IIN+
Sbjct: 73  LQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELI-KNKGRIINI 131
Query: 124 GSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG 157
            S       P +  Y ++K  + +LT  L + LG
Sbjct: 132 ASTRAFQSEPDSEAYASAKGGIVALTHALAMSLG 165

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 5   GIGHALARAFAASDCRVVAT----GRSKATMADLEQ-DPRFFVQELDVLSEQSVQNVLSN 59
           GIG  +A  FA +   VV +      +   + +++Q   + F    D+ SEQ +  +   
Sbjct: 22  GIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADF 81
Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
            + K GK+D+LVNNAG     P  ++P++   + +  NVF    L Q V P M     G 
Sbjct: 82  AISKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGV 140
Query: 120 IINVGSV 126
           I+ + S+
Sbjct: 141 ILTITSM 147

>pdb|1PWX|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec Complexed With Bromide Length = 254

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 70/161 (43%), Gaps = 8/161 (4%)
Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
           GG+G AL  + A     V     S     +LE     + Q L  +SEQ    ++  V   
Sbjct: 13  GGMGSALRLSEAGHT--VACHDESFKQKDELEAFAETYPQ-LKPMSEQEPAELIEAVTSA 69
Query: 64  FGKIDVLV-NNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIIN 122
           +G++DVLV N+       P+ +  +             P  LV AV   M  RK G II 
Sbjct: 70  YGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIF 129
Query: 123 VGSVTVAAPGPWA--GTYTASKAALHSLTDTLRLELGHFGI 161
           + S T    GPW    TYT+++A   +L + L  ELG + I
Sbjct: 130 ITSATPF--GPWKELSTYTSARAGACTLANALSKELGEYNI 168

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 9/165 (5%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVLSN 59
           GIG A A  FA    +VV T R+   +A+L  +             DV  E   + ++  
Sbjct: 19  GIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVEL 78
Query: 60  VLEKFGKIDVLVNNAG-VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
            + +FG +D   NNAG +  +G ++ + +    +T +TN+       +  VP +A    G
Sbjct: 79  AVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGG 138
Query: 119 KIINVGSVTVAAPGPWAGT--YTASKAALHSLTDTLRLELGHFGI 161
            +    S      G +AG   Y ASKA L  L   L +ELG  GI
Sbjct: 139 SLTFTSSFVGHTAG-FAGVAPYAASKAGLIGLVQALAVELGARGI 182

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 72/164 (43%), Gaps = 15/164 (9%)
Query: 11  ARAFAASDCRVVATGRSKA-----TMADLEQ-DPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           ARA AAS   +  TG   A      +A+L     R      D+    S Q  +  V+ +F
Sbjct: 46  ARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF 105
Query: 65  GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNT----NVFGPMRLVQAVVPHMA---YRKK 117
           G+ID LVNNAG+  +  + +  L    + F+T    N+ G +   QAV+        R  
Sbjct: 106 GRIDCLVNNAGIASI--VRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAXLASDARAS 163
Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             IIN+ SV+     P    Y  SKA L + +  L L L   GI
Sbjct: 164 RSIINITSVSAVXTSPERLDYCXSKAGLAAFSQGLALRLAETGI 207

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 52.8 bits (125), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 59/123 (47%), Gaps = 14/123 (11%)
Query: 45  LDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRL 104
           LDV  + +  + +    EK G  DVLVNNAG+  + PL EV    ++Q ++ NVF     
Sbjct: 60  LDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFG 119
Query: 105 VQAVVPHMAYRK------KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL-- 156
           +QA     A RK      KGKIIN  S+      P    Y+ +K A+  LT     EL  
Sbjct: 120 IQA-----ASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAP 174
Query: 157 -GH 158
            GH
Sbjct: 175 KGH 177

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 4/161 (2%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDV--LSEQSVQNVLSNVLE 62
           GIG  + RAFAAS  R++   R  A +    Q+    V    V  +++       +   E
Sbjct: 22  GIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAE 81
Query: 63  KFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIIN 122
               + +LVN+AG+  +    E   +   Q    NV G     +A    M  R  G I+N
Sbjct: 82  AVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVN 141
Query: 123 VGSV--TVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +GS+  T+     +A +Y ASK A+H LT  L  E    G+
Sbjct: 142 LGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGV 182

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 3/160 (1%)
Query: 5   GIGHALARAFAASDCRVVATGRSKA--TMADLEQDPRFFVQELDVLSEQSVQNVLSNVLE 62
           GIG  +A  FA     VVA     A   +A+           LDV ++ +V  +  ++ +
Sbjct: 216 GIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWLDVTADDAVDKISEHLRD 275
Query: 63  KFG-KIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
             G K D+LVNNAG+     LA +  +  +     N+  P+RL + +V + +  + G++I
Sbjct: 276 HHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRLTEGLVGNGSIGEGGRVI 335
Query: 122 NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            + S+   A       Y  +KA +  +T  L   L   GI
Sbjct: 336 GLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGI 375

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 5   GIGHALARAFAASDCRVVATGRSKAT------MADLEQDPRFFVQELDVLSEQSVQNVLS 58
           GIG A+A  +A +   V+A GR+         +AD        V +L  L   +      
Sbjct: 42  GIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAA------ 95
Query: 59  NVLEKFG---KIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
           NV E+     ++DVLVNNAG+    P  EV L    +    N+     L ++    M   
Sbjct: 96  NVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAH 155
Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             G+I+ + S+     G     Y ASK A+  LT  L  E    G+
Sbjct: 156 GSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGV 201

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 5/161 (3%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFF---VQELDVLSEQSVQNVLSNVL 61
           GIG  +A  FA     VVA     A   DL++           LDV ++ +V  + ++V 
Sbjct: 224 GIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKVGGTALTLDVTADDAVDKITAHVT 282
Query: 62  EKFG-KIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
           E  G K+D+LVNNAG+     LA +     +     N+  P RL + +V +    + G++
Sbjct: 283 EHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRV 342
Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           I + S+   A       Y  +KA +  L + L   L   GI
Sbjct: 343 IGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLADKGI 383

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 3/160 (1%)
Query: 5   GIGHALARAFAASDCRVVATGRSKA--TMADLEQDPRFFVQELDVLSEQSVQNVLSNVLE 62
           GIG  +A  FA     VVA     A   +A+           LDV ++ +V  +  ++ +
Sbjct: 208 GIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWLDVTADDAVDKISEHLRD 267
Query: 63  KFG-KIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
             G K D+LVNNAG+     LA +  +  +     N+  P+RL + +V + +  + G++I
Sbjct: 268 HHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRLTEGLVGNGSIGEGGRVI 327
Query: 122 NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            + S+   A       Y  +KA +  +T  L   L   GI
Sbjct: 328 GLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGI 367

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 3/160 (1%)
Query: 5   GIGHALARAFAASDCRVVATGRSKA--TMADLEQDPRFFVQELDVLSEQSVQNVLSNVLE 62
           GIG  +A  FA     VVA     A   +A+           LDV ++ +V  +  ++ +
Sbjct: 224 GIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWLDVTADDAVDKISEHLRD 283
Query: 63  KFG-KIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
             G K D+LVNNAG+     LA +  +  +     N+  P+RL + +V + +  + G++I
Sbjct: 284 HHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRLTEGLVGNGSIGEGGRVI 343
Query: 122 NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            + S+   A       Y  +KA +  +T  L   L   GI
Sbjct: 344 GLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGI 383

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 3/160 (1%)
Query: 5   GIGHALARAFAASDCRVVATGRSKA--TMADLEQDPRFFVQELDVLSEQSVQNVLSNVLE 62
           GIG  +A  FA     VVA     A   +A+           LDV ++ +V  +  ++ +
Sbjct: 232 GIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWLDVTADDAVDKISEHLRD 291
Query: 63  KFG-KIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
             G K D+LVNNAG+     LA +  +  +     N+  P+RL + +V + +  + G++I
Sbjct: 292 HHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRLTEGLVGNGSIGEGGRVI 351
Query: 122 NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            + S+   A       Y  +KA +  +T  L   L   GI
Sbjct: 352 GLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGI 391

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 3/160 (1%)
Query: 5   GIGHALARAFAASDCRVVATGRSKA--TMADLEQDPRFFVQELDVLSEQSVQNVLSNVLE 62
           GIG  +A  FA     VVA     A   +A+           LDV ++ +V  +  ++ +
Sbjct: 245 GIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWLDVTADDAVDKISEHLRD 304
Query: 63  KFG-KIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
             G K D+LVNNAG+     LA +  +  +     N+  P+RL + +V + +  + G++I
Sbjct: 305 HHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRLTEGLVGNGSIGEGGRVI 364
Query: 122 NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            + S+   A       Y  +KA +  +T  L   L   GI
Sbjct: 365 GLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGI 404

>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 39  RFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNV 98
           + +  E+DV    +V   L+N + +FGK+DV+V NAG+  +G  A +P+ A    F+ + 
Sbjct: 72  KAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLG--AHLPVQAFADAFDVDF 129
Query: 99  FGPMRLVQAVVPHMAYRKKGKIINVGSV 126
            G +  V A +P++       II  GSV
Sbjct: 130 VGVINTVHAALPYLT--SGASIITTGSV 155

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 71/165 (43%), Gaps = 9/165 (5%)
Query: 5   GIGHALARAFAASDCRVVATGRS-------KATMADLEQDPRFFVQELDVLSEQSVQNVL 57
           GIG  +A  FA +   V    RS        A + +L       V+ LDV    S  +  
Sbjct: 52  GIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVR-LDVSDPGSCADAA 110
Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             V++ FG +DV+  NAG+     L  +    + +  + NV G +  VQA +  +    +
Sbjct: 111 RTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGR 170
Query: 118 GKIINVGSVTVAAPG-PWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G++I   S+T    G P    Y ASKAA      T  +EL   G+
Sbjct: 171 GRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGV 215

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 46  DVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLV 105
           DV S ++V  +++  +EK G++DVLVNNAG+    P+ ++     ++  N  +   MR  
Sbjct: 81  DVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRAT 140
Query: 106 QAVVPHM-AYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +A + +       G I+N  SV           Y A+KA + +LT    +E   FG+
Sbjct: 141 RAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGV 197

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 15/164 (9%)
Query: 5   GIGHALARAFAASDCRVVAT-------GRSKATMA------DLEQDPRFFVQELDVLSEQ 51
           G+G A A AFA     VV         G  K ++A      ++ +     V   D + E 
Sbjct: 41  GLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRRGGKAVANYDSVEEG 100
Query: 52  SVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH 111
             + V+   L+ FG+IDV+VNNAG+      A +     +     ++ G  ++ +A   H
Sbjct: 101 --EKVVKTALDAFGRIDVVVNNAGILRDRSFARISDEDWDIIHRVHLRGSFQVTRAAWEH 158
Query: 112 MAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
           M  +K G+II   S +          Y+A+K  L  L ++L +E
Sbjct: 159 MKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAIE 202

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 6/157 (3%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPR---FFVQE--LDVLSEQSVQNVLSN 59
           GIG+ +    A+    V    R++  + D     R   F V+    D+ S    Q +++ 
Sbjct: 19  GIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNT 78
Query: 60  VLEKF-GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
           V   F GK+++LVNNAG+       +  +       + N      L     P +   ++G
Sbjct: 79  VANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERG 138
Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
            ++ + SV+ A   P+   Y A+K A+  LT  L  E
Sbjct: 139 NVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFE 175

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 4/143 (2%)
Query: 23  ATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG 80
           +T    A  ADL +  + R    E+DV    +++  + + +E+ G++D++V NAG+   G
Sbjct: 59  STPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGG 118
Query: 81  P-LAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM-AYRKKGKIINVGSVTVAAPGPWAGTY 138
             L +       +  + N+ G  + V+A VPHM A  + G II   SV      P  G Y
Sbjct: 119 DTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHY 178
Query: 139 TASKAALHSLTDTLRLELGHFGI 161
            A+K  +  L     +ELG   I
Sbjct: 179 VAAKHGVVGLMRAFGVELGQHMI 201

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 6/157 (3%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPR---FFVQE--LDVLSEQSVQNVLSN 59
           GIG+ +    A+    V    R++  + D     R   F V+    D+ S    Q +++ 
Sbjct: 20  GIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNT 79
Query: 60  VLEKF-GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
           V   F GK+++LVNNAG+       +  +       + N      L     P +   ++G
Sbjct: 80  VANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERG 139
Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
            ++ + SV+ A   P+   Y A+K A+  LT  L  E
Sbjct: 140 NVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFE 176

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 23  ATGRSKATMADL--EQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG 80
           +T    A  ADL  + D R    ++DV   +++++ + + +E+ G++D++V NAGV   G
Sbjct: 59  STPEDLAETADLVKDLDRRIVTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDG 118
Query: 81  -PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH-MAYRKKGKIINVGSVTVAAPGPWAGTY 138
             L ++  +  +   + N+ G    V+A VPH ++  + G I+   SV      P  G Y
Sbjct: 119 RKLHKIRDNVWQDMIDINLTGVWHTVKAGVPHVLSGGRGGSIVLTSSVGGRKAYPNTGHY 178
Query: 139 TASKAALHSLTDTLRLELG 157
            A+K  +  L     +ELG
Sbjct: 179 IAAKHGVIGLMRAFAVELG 197

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 71/170 (41%), Gaps = 27/170 (15%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQE--------LDVLSEQSVQNV 56
           GIG A    FA    R+VA         D+E+ P     E         DV    SV+  
Sbjct: 16  GIGRATLELFAKEGARLVAC--------DIEEGPLREAAEAVGAHPVVXDVADPASVERG 67
Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
            +  L   G++D +V+ AG+       + PL   E     N+ G   + +A     A R+
Sbjct: 68  FAEALAHLGRLDGVVHYAGITRDNFHWKXPLEDWELVLRVNLTGSFLVAKAA--SEAXRE 125
Query: 117 KGKIINVGSVTVAAPGPWAGT-----YTASKAALHSLTDTLRLELGHFGI 161
           K    N GS+ + A   + G      Y AS A +  LT TL LELG +GI
Sbjct: 126 K----NPGSIVLTASRVYLGNLGQANYAASXAGVVGLTRTLALELGRWGI 171

>pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Rhizobium Meliloti Length = 281

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 71/160 (44%), Gaps = 19/160 (11%)
Query: 10  LARAFAASDCRVVATGRS----KATMADLEQDPRFFVQEL--DVLSEQSVQNVLSNVLEK 63
           +A+A +A    VV TGR      A   ++       V+ +  DV     V  + + V  +
Sbjct: 49  IAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE 108
Query: 64  FGKIDVLVNNAGVQCVG-PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR------- 115
           F ++D+LVNNAG      PL EV           N+ G     Q      A+R       
Sbjct: 109 FARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQ-----HAFRXXKAQTP 163
Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
           + G+IIN GS++   P P +  YTA+K A+  LT +  L+
Sbjct: 164 RGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALD 203

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 62/159 (38%), Gaps = 2/159 (1%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQ--ELDVLSEQSVQNVLSNVLE 62
           GIG A+AR  A   C V+                        +DV  EQ +  ++   + 
Sbjct: 40  GIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVA 99
Query: 63  KFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIIN 122
            FG +D LV NAGV  +  L +  +   ++    N+ G     +   P M  R  G I+N
Sbjct: 100 AFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVN 159
Query: 123 VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           + S+         G Y  SKA +  L+     EL   GI
Sbjct: 160 LSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGI 198

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 10/166 (6%)
Query: 5   GIGHALARAFAASDCR-----VVATG--RSKATMADLEQDPRFFVQELDVLSEQSVQNVL 57
           G+G A A   AA   +     V + G   SKA + +   D        DV  E  V+  +
Sbjct: 24  GLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYV 83
Query: 58  SNVLEKFGKIDVLVNNAGVQCV-GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
           +   E+FG+ID   NNAG++    P      +  ++  + N+ G    ++ V+  M  + 
Sbjct: 84  TATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG 143
Query: 117 KGKIINVGSV-TVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            G ++N  SV  +   G  +G Y A+K  +  LT    +E G +GI
Sbjct: 144 SGMVVNTASVGGIRGIGNQSG-YAAAKHGVVGLTRNSAVEYGRYGI 188

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 8/159 (5%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLE--QDPRFFVQELDVLSEQSVQNVLSNVLE 62
           G+G AL   F A   RV    +S   + +LE            DV S Q  +      L 
Sbjct: 16  GLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLA 75
Query: 63  KFGKIDVLVNNAGV-QCVGPLAEVPL----SAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
            FGKID L+ NAG+      LA++P     +A +  F+ NV G +  V+A +P +    +
Sbjct: 76  AFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALV-SSR 134
Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
           G ++   S     P      YTA+K A+  L   +  EL
Sbjct: 135 GSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFEL 173

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 11/165 (6%)
Query: 5   GIGHALARAFAASDCRVV-----ATGRSKATMADLEQDP-RFFVQELDVLSEQSVQNVLS 58
           GIG A++ AFA     +        G +  T   +E++  +  +   D+  EQ  ++++ 
Sbjct: 58  GIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQ 117
Query: 59  NVLEKFGKIDVLVNNAGVQCVGP-LAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             + + G +++LVNN   Q     L  +    +E+TF  N+F    + +A + H+   K+
Sbjct: 118 ETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHL---KQ 174
Query: 118 GK-IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G  IIN  S+           Y+A+K A+ + T +L   L   GI
Sbjct: 175 GDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGI 219

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 11/165 (6%)
Query: 5   GIGHALARAFAASDCRVV-----ATGRSKATMADLEQDP-RFFVQELDVLSEQSVQNVLS 58
           GIG A++ AFA     +        G +  T   +E++  +  +   D+  EQ  ++++ 
Sbjct: 58  GIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQ 117
Query: 59  NVLEKFGKIDVLVNNAGVQCVGP-LAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             + + G +++LVNN   Q     L  +    +E+TF  N+F    + +A + H+   K+
Sbjct: 118 ETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHL---KQ 174
Query: 118 GK-IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G  IIN  S+           Y+A+K A+ + T +L   L   GI
Sbjct: 175 GDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGI 219

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 78/188 (41%), Gaps = 39/188 (20%)
Query: 4   GGIGHALARAFAASDCRVV------------ATGRSKATMADLEQDPRFFVQELDVLSEQ 51
           GGIG A A AFAA   RVV            A+G S A         +  V E+     +
Sbjct: 37  GGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAA---------QSVVDEITAAGGE 87
Query: 52  SVQN------------VLSNVLEKFGKIDVLVNNAGV---QCVGPLAEVPLSAMEQTFNT 96
           +V +            ++   +E FG +DVLVNNAG+   + +   +E    A+      
Sbjct: 88  AVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLK 147
Query: 97  NVFGPMRLVQAVVPHMAYRKK---GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR 153
             F  MR   A    ++   K   G+IIN  S          G Y+A+KA + +LT    
Sbjct: 148 GHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTLVGA 207
Query: 154 LELGHFGI 161
            E+G +G+
Sbjct: 208 AEMGRYGV 215

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 7/162 (4%)
Query: 5   GIGHALARAFAASDCRVVATG----RSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           GIG A+A   AA    V+ +      +KA  A + +  R      D+    SV+ + + +
Sbjct: 17  GIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAA--DISDPGSVKALFAEI 74
Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM-AYRKKGK 119
               G ID+LVNNA +       +V L    +  + N+ G   + +A    M A  K G+
Sbjct: 75  QALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGR 134
Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +I++ S T  A  P    Y A+K  +   T  L  ELG + I
Sbjct: 135 VISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNI 176

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 6/157 (3%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADL-----EQDPRFFVQELDVLSEQSVQNVLSN 59
           GIG+A+    A    RV    R++  + +      E+         D+LS      ++  
Sbjct: 32  GIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQT 91
Query: 60  VLEKF-GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
           V   F GK+++LVNNAGV       +           TN      L Q   P +   + G
Sbjct: 92  VAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNG 151
Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
            +I + S+   +  P    Y+ASK A++ +T +L  E
Sbjct: 152 NVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACE 188

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 50/123 (40%)
Query: 39  RFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNV 98
           R F    DVL    V+          G   +LVNNAG   V   AE    A  +      
Sbjct: 60  RLFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKF 119
Query: 99  FGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH 158
           F  +  V+A +P +  R    I+ V S+  + P P     +A++A + +L  ++  E   
Sbjct: 120 FSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAP 179
Query: 159 FGI 161
            G+
Sbjct: 180 KGV 182

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 7/124 (5%)
Query: 44  ELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG-VQCVGPLAEVPLSAMEQTFNTNVFGPM 102
           + DV  E+ V      V  + G++  LVNNAG V     +  + L  +++ F  NVFG  
Sbjct: 81  QADVAKEREVLAXFETVDAQLGRLSALVNNAGVVDQTTRVDGITLERLQRXFEINVFGSF 140
Query: 103 RLVQAVVPHMAYR---KKGKIINVGSVT--VAAPGPWAGTYTASKAALHSLTDTLRLELG 157
              +  V   + R     G I+NV S    + +PG +   Y A+K A+ + T  L  E+ 
Sbjct: 141 LCAREAVKRXSTRYGGSGGSIVNVSSAAARLGSPGQYV-DYAAAKGAIDTFTLGLAKEVA 199
Query: 158 HFGI 161
             GI
Sbjct: 200 TEGI 203

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Query: 39  RFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGP-LAEVPLSAMEQTFNTN 97
           R    ++DV    ++Q  + + + + G++D+++ NA +   G  L  +         + N
Sbjct: 90  RIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVN 149
Query: 98  VFGPMRLVQAVVPH-MAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
           + G     +  +PH MA ++ G I+   S+         G Y ASK  LH L  T+ LEL
Sbjct: 150 LNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTMALEL 209
Query: 157 G 157
           G
Sbjct: 210 G 210

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 11/163 (6%)
Query: 4   GGIGHALARAFA-----------ASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQS 52
           GG+G A A AFA             D + V  G S A     E   R      +  S ++
Sbjct: 19  GGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEA 78
Query: 53  VQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM 112
            + ++   L+ FG+IDV+VNNAG+      + +     +     ++ G  ++ +A   H 
Sbjct: 79  GEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHX 138
Query: 113 AYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
             +  G+II   S +          Y+A+K  L  L +TL +E
Sbjct: 139 KKQNYGRIIXTASASGIYGNFGQANYSAAKLGLLGLANTLVIE 181

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 10/157 (6%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           GIG A+A   +     V    R++  +       R+ V +L        +  L  + EK 
Sbjct: 30  GIGRAVADVLSQEGAEVTICARNEELLK--RSGHRYVVCDL--------RKDLDLLFEKV 79
Query: 65  GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG 124
            ++D+LV NAG    G   E+     ++  ++     +++V+  +P M  +  G+I+ + 
Sbjct: 80  KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAIT 139
Query: 125 SVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           S +V +P     T  +++ AL     TL  E+  +GI
Sbjct: 140 SFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGI 176

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 45  LDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRL 104
           +DV  EQ +   +   ++KFG ID+LVNNA    +    + P   ++   N N  G    
Sbjct: 108 VDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLA 167
Query: 105 VQAVVPHMAYRKKGKIINV 123
            +A +P++   K   I+N+
Sbjct: 168 SKACIPYLKKSKVAHILNI 186

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 6/161 (3%)
Query: 2   SQGGIGHALARAFAASDCRVVAT-GRSK-ATMADLEQDPRFFVQEL----DVLSEQSVQN 55
           S  G+G A A   A +   +V    RSK A +   E+  +  V+ L    +V     ++ 
Sbjct: 12  SSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKE 71
Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
           +   + E FG++DV VNNA    + P+ E+  +  + T N N    +   Q     M   
Sbjct: 72  MFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKN 131
Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
             G I+++ S+          T   SKAAL +LT  L +EL
Sbjct: 132 GGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVEL 172

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 63/159 (39%), Gaps = 9/159 (5%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMAD-------LEQDPRFFVQELDVLSEQSVQNVL 57
           GIG   A  FA    ++V    +K  + +       L      FV  +D  + + + +  
Sbjct: 42  GIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFV--VDCSNREDIYSSA 99
Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             V  + G + +LVNNAGV     L       +E+TF  NV       +A +P M     
Sbjct: 100 KKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNH 159
Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
           G I+ V S       P+   Y +SK A      TL  EL
Sbjct: 160 GHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDEL 198

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 46  DVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLV 105
           D+    SV+ + + +    G ID+LVNNA +       +V L    +  + N+ G   + 
Sbjct: 60  DISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVT 119
Query: 106 QAVVPHM-AYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +A      A  K G++I++ S T  A  P    Y A+K  +   T  L  ELG + I
Sbjct: 120 RAGTDQXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELGKYNI 176

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 17/167 (10%)
Query: 2   SQGGIGHALARAFAASDCRVV--------ATGRSKATMADLEQDPRFFVQELDVLSEQSV 53
           S GGIG A A A A     VV        A   +K  +AD           +DV   +S 
Sbjct: 17  SGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD---GGTAISVAVDVSDPESA 73
Query: 54  QNVLSNVLEKFGKIDVLVNNA---GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVP 110
           + +    L +FG ID LVNNA   G   +  L  +     ++  + N+ G +   +AV  
Sbjct: 74  KAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYK 133
Query: 111 HMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG 157
            M  R  G I+N  S    A   ++  Y  +K  ++ LT  L  ELG
Sbjct: 134 KMTKRGGGAIVNQSST---AAWLYSNYYGLAKVGINGLTQQLSRELG 177

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 20/161 (12%)
Query: 5   GIGHALARAF-------AASDCRVVATGRSKATMAD-LEQDPRFFVQELDVLSEQSVQNV 56
           GIG A A A        A  D  + A  + KA + +  E     F+Q  DV  +Q +++ 
Sbjct: 18  GIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ-CDVADQQQLRDT 76
Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
              V++ FG++D+LVNNAGV              E+T   N+   +      + +M+ + 
Sbjct: 77  FRKVVDHFGRLDILVNNAGVN--------NEKNWEKTLQINLVSVISGTYLGLDYMSKQN 128
Query: 117 KGK---IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL 154
            G+   IIN+ S+    P      Y ASK  +   T +  L
Sbjct: 129 GGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAAL 169

>pdb|3SC4|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase (A0qtm2 Homolog) Mycobacterium Thermoresistibile Length = 285

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 12/131 (9%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNV-------- 56
           GIG A+A+  AA    V    +S      L        +E++    Q++  V        
Sbjct: 20  GIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDA 79
Query: 57  ----LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM 112
               ++  +E+FG ID+ VNNA    +G + EVPL   +      V G   + Q+ +PHM
Sbjct: 80  VAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHM 139
Query: 113 AYRKKGKIINV 123
             R    I+ +
Sbjct: 140 KGRDNPHILTL 150

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 14/138 (10%)
Query: 2   SQGGIGHALARAFAASDCRVVATGRS-----KATMADLEQDP-RFFVQELDVLSEQSVQN 55
           S  GIG A AR FA +  +V   GR        T+A +  D         D+ + ++ Q 
Sbjct: 15  SSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQ 74
Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVG--PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMA 113
           ++   + KFG IDVL+NNAG   VG  PL E+  +  +   + N+   +   +  +PH+A
Sbjct: 75  LVDEFVAKFGGIDVLINNAG-GLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLA 133
Query: 114 YRKKGK-----IINVGSV 126
              K       +I+ GS+
Sbjct: 134 AAAKASGQTSAVISTGSI 151

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 48/116 (41%)
Query: 46  DVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLV 105
           ++L  ++   ++    E  G +D LVNNAG+     L  +     E     N+    R  
Sbjct: 60  NLLEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTT 119
Query: 106 QAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +  V  M   + G+I+N+ SV      P    Y ASKA L   T  +  E    GI
Sbjct: 120 REAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGI 175

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 71/167 (42%), Gaps = 14/167 (8%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQEL---------DVLSEQSVQN 55
           GIG A A A+A     V A     A   D +Q  +  ++E          D+  E   ++
Sbjct: 60  GIGRAAAIAYAREGADV-AINYLPAEEEDAQQV-KALIEECGRKAVLLPGDLSDESFARS 117
Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGP-LAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY 114
           ++    E  G +D+L   AG Q   P + ++     +QTF  NVF    + Q  +P +  
Sbjct: 118 LVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLP- 176
Query: 115 RKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            K   II   S+    P P    Y A+KAA+ + +  L  ++   GI
Sbjct: 177 -KGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGI 222

>pdb|4IXT|A Chain A, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase (hhec) Bound To Ethyl (r)-4-cyano-3-hydroxybutyrate Length = 254

Iteration: 1
 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 7/122 (5%)
Query: 44  ELDVLSEQSVQNVLSNVLEKFGKIDVLVNN--AGVQCVGPLAEVPLSAMEQTFNTNVFGP 101
           +L  +SEQ    ++  V    G +D+LV+N  A V+   P+ +  +             P
Sbjct: 50  QLIPMSEQEPVELIEAVTSALGHVDILVSNDIAPVEW-RPIDKYAVEDYRDMVEALQIKP 108
Query: 102 MRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWA--GTYTASKAALHSLTDTLRLELGHF 159
             L  AV   M  RK G II + S   A+ GPW    TY +++A   +L + L  ELG  
Sbjct: 109 FALANAVASQMKRRKSGHIIFITS--AASFGPWKELSTYASARAGASALANALSKELGEH 166
Query: 160 GI 161
            I
Sbjct: 167 NI 168

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 12/128 (9%)
Query: 46  DVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVP------LSAMEQTFNTNVF 99
           DV SE+ VQ  L+    KFG++DV VN AG+        +       L   ++  + N+ 
Sbjct: 64  DVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLM 123
Query: 100 GPMRLVQAVVPHMAYR------KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR 153
           G   +++ V   M         ++G IIN  SV           Y+ASK  +  +T  + 
Sbjct: 124 GTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIA 183
Query: 154 LELGHFGI 161
            +L   GI
Sbjct: 184 RDLAPIGI 191

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 12/128 (9%)
Query: 46  DVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVP------LSAMEQTFNTNVF 99
           DV SE+ VQ  L+    KFG++DV VN AG+        +       L   ++  + N+ 
Sbjct: 64  DVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLM 123
Query: 100 GPMRLVQAVVPHMAYR------KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR 153
           G   +++ V   M         ++G IIN  SV           Y+ASK  +  +T  + 
Sbjct: 124 GTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIA 183
Query: 154 LELGHFGI 161
            +L   GI
Sbjct: 184 RDLAPIGI 191

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 12/128 (9%)
Query: 46  DVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVP------LSAMEQTFNTNVF 99
           DV SE+ VQ  L+    KFG++DV VN AG+        +       L   ++  + N+ 
Sbjct: 66  DVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLM 125
Query: 100 GPMRLVQAVVPHMAYR------KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR 153
           G   +++ V   M         ++G IIN  SV           Y+ASK  +  +T  + 
Sbjct: 126 GTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIA 185
Query: 154 LELGHFGI 161
            +L   GI
Sbjct: 186 RDLAPIGI 193

>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 26/137 (18%)
Query: 5   GIGHALARAFAASDCR-----VVATGRS----KATMADLEQD---PRFFVQELDVLSEQS 52
           GIG A+ R      CR     VV T R     +A +  L+ +   PRF   +LD+   QS
Sbjct: 15  GIGLAIVRDL----CRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRF--HQLDIDDLQS 68
Query: 53  VQNVLSNVLEKFGKIDVLVNNAGV--QCVGPLAEVPLSAM-EQTFNTNVFGPMRLVQAVV 109
           ++ +   + +++G +DVLVNNAG+  +   P    P     E T  TN FG   +   ++
Sbjct: 69  IRALRDFLRKEYGGLDVLVNNAGIAFKVADP---TPFHIQAEVTMKTNFFGTRDVCTELL 125
Query: 110 PHMAYRKKGKIINVGSV 126
           P +  + +G+++NV S+
Sbjct: 126 PLI--KPQGRVVNVSSI 140

>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 26/137 (18%)
Query: 5   GIGHALARAFAASDCR-----VVATGRS----KATMADLEQD---PRFFVQELDVLSEQS 52
           GIG A+ R      CR     VV T R     +A +  L+ +   PRF   +LD+   QS
Sbjct: 15  GIGLAIVRDL----CRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRF--HQLDIDDLQS 68
Query: 53  VQNVLSNVLEKFGKIDVLVNNAGV--QCVGPLAEVPLSAM-EQTFNTNVFGPMRLVQAVV 109
           ++ +   + +++G +DVLVNNAG+  +   P    P     E T  TN FG   +   ++
Sbjct: 69  IRALRDFLRKEYGGLDVLVNNAGIAFKVADP---TPFHIQAEVTMKTNFFGTRDVXTELL 125
Query: 110 PHMAYRKKGKIINVGSV 126
           P +  + +G+++NV S+
Sbjct: 126 PLI--KPQGRVVNVSSI 140

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%)
Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
           V+   ++ FG++D+LVNNAG+     L +          + ++ G  +  QA  P+M  +
Sbjct: 92  VIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQ 151
Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
             G+II   S +          YTA+K  L  L +T+ +E
Sbjct: 152 NYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIE 191

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 64/157 (40%), Gaps = 7/157 (4%)
Query: 5   GIGHALARAFAASDCRVVATGR-----SKATMADLEQDPRFFVQELDVLSEQSVQNVLSN 59
           GIG A+A  F     +V+ TGR      KA  +    D   F Q  D   E     +   
Sbjct: 17  GIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQH-DSSDEDGWTKLFDA 75
Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG- 118
             + FG +  LVNNAG+     + E   +   +    N+ G     +  +  M  +  G 
Sbjct: 76  TEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGA 135
Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
            IIN+ S+      P  G Y ASK A+  ++ +  L+
Sbjct: 136 SIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALD 172

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 10/161 (6%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVLSN 59
           GIG  +A A+A +  +V    R    +  +  +      +      DV     V+ +L  
Sbjct: 43  GIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQ 102
Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KG 118
           +  + G ID+ V NAG+  V  + ++PL   ++  +TNV G     QA    M  +   G
Sbjct: 103 MTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGG 162
Query: 119 KIINVGSVT---VAAPGPWAGTYTASKAALHSLTDTLRLEL 156
            II   S++   +  P      Y  SKAA+  LT  + +EL
Sbjct: 163 TIITTASMSGHIINIP-QQVSHYCTSKAAVVHLTKAMAVEL 202

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 66  KIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGS 125
           K D+L+NNAG+     + E      ++  + N   P  ++Q  +  +  R   +IIN+ S
Sbjct: 91  KFDILINNAGIGPGAFIEETTEQFFDRXVSVNAKAPFFIIQQALSRL--RDNSRIINISS 148
Query: 126 VTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
                  P    Y+ +K A+++ T TL  +LG  GI
Sbjct: 149 AATRISLPDFIAYSXTKGAINTXTFTLAKQLGARGI 184

>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 18/132 (13%)
Query: 5   GIGHALARAFA---ASDCRVVA--TGRSKATMADLEQD---PRFFVQELDVLSEQSVQNV 56
           GIG A+ R      A D  + A    R +A +  L+ +   PRF   +LD++  QS++ +
Sbjct: 15  GIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRF--HQLDIIDLQSIRAL 72
Query: 57  LSNVLEKFGKIDVLVNNAGV--QCVGPLAEVPLSAM-EQTFNTNVFGPMRLVQAVVPHMA 113
              + +++G +DVLVNNA +  Q   P    P     E T  TN  G   +   ++P + 
Sbjct: 73  CDFLRKEYGGLDVLVNNAAIAFQLDNP---TPFHIQAELTMKTNFMGTRNVCTELLPLI- 128
Query: 114 YRKKGKIINVGS 125
            + +G+++NV S
Sbjct: 129 -KPQGRVVNVSS 139

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 12/128 (9%)
Query: 46  DVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ-CVGPLAEVP-----LSAMEQTFNTNVF 99
           +V SE+ VQ  L+   EKFG+IDV VN AG+   +    E       L   ++  N N+ 
Sbjct: 64  NVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLI 123
Query: 100 GPMRLVQAVVPHMAYR------KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR 153
           G   +++ V   M         ++G IIN  SV           Y+ASK  +  +T  + 
Sbjct: 124 GTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIA 183
Query: 154 LELGHFGI 161
            +L   GI
Sbjct: 184 RDLAPIGI 191

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 12/128 (9%)
Query: 46  DVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ-CVGPLAEVP-----LSAMEQTFNTNVF 99
           +V SE+ VQ  L+   EKFG+IDV VN AG+   +    E       L   ++  N N+ 
Sbjct: 63  NVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLI 122
Query: 100 GPMRLVQAVVPHMAYR------KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR 153
           G   +++ V   M         ++G IIN  SV           Y+ASK  +  +T  + 
Sbjct: 123 GTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIA 182
Query: 154 LELGHFGI 161
            +L   GI
Sbjct: 183 RDLAPIGI 190

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/159 (20%), Positives = 74/159 (46%), Gaps = 9/159 (5%)
Query: 5   GIGHALARAFAASDCRVV-----ATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLS 58
           GIG  +A       C+V+     +T  ++  +A ++++       + +V   + +  +  
Sbjct: 40  GIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFE 99
Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
             ++ FGK+D++ +N+GV   G + +V     ++ F  N  G   + +    H+     G
Sbjct: 100 EAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI--GG 157
Query: 119 KIINVGSVTVAAPG-PWAGTYTASKAALHSLTDTLRLEL 156
           ++I +GS+T  A   P    Y+ SK A+ +    + +++
Sbjct: 158 RLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDM 196

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 12/128 (9%)
Query: 46  DVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ-CVGPLAEVP-----LSAMEQTFNTNVF 99
           +V SE+ VQ  L+   EKFG+IDV VN AG+   +    E       L   ++  N N+ 
Sbjct: 64  NVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLI 123
Query: 100 GPMRLVQAVVPHMAYR------KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR 153
           G   +++ V   M         ++G IIN  SV           Y+ASK  +  +T  + 
Sbjct: 124 GTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIA 183
Query: 154 LELGHFGI 161
            +L   GI
Sbjct: 184 RDLAPIGI 191

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Query: 46  DVLSEQSVQNVLSNVLEKFGKIDVLVNNAG-VQCVGPLAEVPLSAMEQTFNTNVFGPMRL 104
           D+ +E      +  V    G++  +V+ AG  + +GP+ +V   A  +T + NV G M +
Sbjct: 71  DITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYV 130
Query: 105 VQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG 157
           ++     M     G  + + S+  +    W G Y  +K+A+  L      ELG
Sbjct: 131 LKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELG 183

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/159 (20%), Positives = 74/159 (46%), Gaps = 9/159 (5%)
Query: 5   GIGHALARAFAASDCRVV-----ATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLS 58
           GIG  +A       C+V+     +T  ++  +A ++++       + +V   + +  +  
Sbjct: 40  GIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFE 99
Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
             ++ FGK+D++ +N+GV   G + +V     ++ F  N  G   + +    H+     G
Sbjct: 100 EAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI--GG 157
Query: 119 KIINVGSVTVAAPG-PWAGTYTASKAALHSLTDTLRLEL 156
           ++I +GS+T  A   P    Y+ SK A+ +    + +++
Sbjct: 158 RLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDM 196

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 69/168 (41%), Gaps = 16/168 (9%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQ----------DPRFFVQELDVLSEQSVQ 54
           GIG A A  FA    R+V    S      LEQ          D    V ++  L E  + 
Sbjct: 42  GIGLATATEFARRGARLVL---SDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDE--MV 96
Query: 55  NVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY 114
            +        G +DV+ +NAG+   GPLA++         + +++G +  V+A +P +  
Sbjct: 97  RLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLE 156
Query: 115 R-KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +   G I    S     P    GTY  +K  +  L +TL  E+   GI
Sbjct: 157 QGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGI 204

>pdb|3I1J|A Chain A, Structure Of A Putative Short Chain Dehydrogenase From Pseudomonas Syringae Length = 247

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 15/148 (10%)
Query: 21  VVATGRSKATMADL--------EQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN 72
           VV  GR++A++A++        +  P      L+  + Q  + + + V  +FG++D L++
Sbjct: 41  VVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLH 100
Query: 73  NAGVQCVG---PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI-INVGSVTV 128
           NA +  +G   PL ++P     Q  + NV     L +A++P +   +   I     SV  
Sbjct: 101 NASI--IGPRTPLEQLPDEDFXQVXHVNVNATFXLTRALLPLLKRSEDASIAFTSSSVGR 158
Query: 129 AAPGPWAGTYTASKAALHSLTDTLRLEL 156
                W G Y  SK A   L  TL  EL
Sbjct: 159 KGRANW-GAYGVSKFATEGLXQTLADEL 185

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Query: 40  FFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVF 99
            FV+  DV SE     V++ V  + G ++VLVNNAG+   G +    L    +    N  
Sbjct: 55  MFVRH-DVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTE 113
Query: 100 GPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLT 149
                 Q  +  M     G IIN+ SV+   P      Y+ASKAA+ +LT
Sbjct: 114 SVFIGCQQGIAAMK-ETGGSIINMASVSSWLPIEQYAGYSASKAAVSALT 162

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 2/118 (1%)
Query: 46  DVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLV 105
           D+  E  V+  ++  ++ FG ID+LVNNA    +    + P    +     N  G     
Sbjct: 70  DIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPXKRFDLXQQVNARGSFVCA 129
Query: 106 QAVVPHMAYRKKGKIINVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
           QA +PH+       I+ +       P  W     YT +K     +T  L  E G  G+
Sbjct: 130 QACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKXGXSLVTLGLAAEFGPQGV 187

>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 26/137 (18%)
Query: 5   GIGHALARAFAASDCR-----VVATGRS----KATMADLEQD---PRFFVQELDVLSEQS 52
           GIG A+AR      CR     VV T R     +A +  L+ +   PRF   +LD+   QS
Sbjct: 13  GIGLAIAREL----CRQFSGDVVLTARDVARGQAAVQQLQAEGLSPRF--HQLDIDDLQS 66
Query: 53  VQNVLSNVLEKFGKIDVLVNNAGV--QCVGPLAEVPLS-AMEQTFNTNVFGPMRLVQAVV 109
           ++ +   + +++G ++VLVNNA V  +   P+   P     E T  TN F    +   ++
Sbjct: 67  IRALRDFLRKEYGGLNVLVNNAAVAFKSDDPM---PFDIKAEMTLKTNFFATRNMCNELL 123
Query: 110 PHMAYRKKGKIINVGSV 126
           P M  +  G+++N+ S+
Sbjct: 124 PIM--KPHGRVVNISSL 138

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM-AYRKKGKIIN 122
           FG +DVLVNNAG+    P+ +      + T   N+  P  L  AV   M A  + G II 
Sbjct: 96  FGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIIT 155
Query: 123 VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           V S    AP P    Y  SKA L   T  L  ELG  GI
Sbjct: 156 VASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGI 194

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 63/157 (40%), Gaps = 7/157 (4%)
Query: 5   GIGHALARAFAASDCRVVATGR-----SKATMADLEQDPRFFVQELDVLSEQSVQNVLSN 59
           GIG A+A  F     +V+ T R      KA  +    D   F Q  D   E     +   
Sbjct: 17  GIGLAIATKFVEEGAKVMITDRHSDVGEKAAKSVGTPDQIQFFQH-DSSDEDGWTKLFDA 75
Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG- 118
             + FG +  LVNNAG+     + E   +   +    N+ G     +  +  M  +  G 
Sbjct: 76  TEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGA 135
Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
            IIN+ S+      P  G Y ASK A+  ++ +  L+
Sbjct: 136 SIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALD 172

>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 35  EQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTF 94
           ++ PR     +++  +   ++ ++  +  FG++D LVNNAGV   G   +    A   + 
Sbjct: 52  QRQPRATYLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVND-GIGLDAGRDAFVASL 110
Query: 95  NTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVT-VAAPGPWAGTYTASKAALHSLTDTLR 153
             N+     +    VPH+    +G I+N+ S T V   G  +G Y ASK A  +LT    
Sbjct: 111 ERNLIHYYAMAHYCVPHLK-ATRGAIVNISSKTAVTGQGNTSG-YCASKGAQLALTREWA 168
Query: 154 LELGHFGI 161
           + L   G+
Sbjct: 169 VALREHGV 176

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/160 (23%), Positives = 67/160 (41%), Gaps = 8/160 (5%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD------PRFFVQELDVLSEQSVQNVLS 58
           GIG  +A  F    C  V   RS   +    +        R     +DV +  +V   + 
Sbjct: 38  GIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVD 97
Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
             L++FG+ID+L+N A    + P   +  +A +   + +  G   + + +         G
Sbjct: 98  QALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGG 157
Query: 119 KIINVGSVTVAAPGPWAGTYTAS-KAALHSLTDTLRLELG 157
            I+N+ + T+   G     +  S KAA+ ++T  L +E G
Sbjct: 158 VIVNI-TATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWG 196

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Query: 44  ELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMR 103
           + D+     V  +    +  FG +D +++N+G++      EV     ++ FN N  G   
Sbjct: 77  QADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFF 136
Query: 104 LVQAVVPHMAYRKKGKIINVGSVTVAAPG-PWAGTYTASKAALHSLTDTLRLELGHFGI 161
           + Q  + H   R+ G+II   S+     G P    Y  SKAA+        ++ G  G+
Sbjct: 137 VAQQGLKHC--RRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGV 193

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 66/163 (40%), Gaps = 6/163 (3%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMAD-LEQDPRFFVQELDVLSEQSV----QNVLSN 59
           GIGHA+   FA     +    R++  + + L +  +   Q    + + S+    + ++  
Sbjct: 25  GIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQT 84
Query: 60  VLEKFG-KIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
           V   FG K+D+L+NN G     P  +          +TN+     L Q   P +     G
Sbjct: 85  VSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCG 144
Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            II + S+           Y+A+K AL+ L   L  E    GI
Sbjct: 145 NIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGI 187

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 6/157 (3%)
Query: 5   GIGHALARAFAASDCRVVATGRSKATMADL------EQDPRFFVQELDVLSEQSVQNVLS 58
           GIG  +A+  A+   +V    RS A +AD       E+  +  V + D  SE      + 
Sbjct: 40  GIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQ 99
Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
            +++  G +  LVNNAGV       ++         + N+       +  +  M+  + G
Sbjct: 100 TIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFG 159
Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
            ++NV S+           Y+ASK  + +++ +   E
Sbjct: 160 SVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYE 196

>pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 16/119 (13%)
Query: 54  QNVLSNVLEKFGKIDVLVNNAGVQCVGPLAE----------VPLSA-MEQTFNTNVFGPM 102
           ++++      FG+ DVLVNNA      PL             P+ A + + F +N   P+
Sbjct: 82  EDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPL 141
Query: 103 RLVQAVVPHM----AYRKKG-KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
            L++A         A+R +   ++N+       P P    YT +K AL  LT    LEL
Sbjct: 142 FLIRAFARRQGEGGAWRSRNLSVVNLCDAXTDLPLPGFCVYTXAKHALGGLTRAAALEL 200

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 15/122 (12%)
Query: 46  DVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLV 105
           DV   ++V+ V +  LE+FG++  + + AGV        +PL A E+    N+ G     
Sbjct: 60  DVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSF--- 116
Query: 106 QAVVPHMAYRKKGKIINVG-----SVTVAAPGPWA-GTYTASKAALHSLTDTLRLELGHF 159
                 +  RK G+++  G     + +VA  G +    Y A K  +  L  TL LEL   
Sbjct: 117 ------LVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAGKLGVVGLARTLALELARK 170
Query: 160 GI 161
           G+
Sbjct: 171 GV 172

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 1/124 (0%)
Query: 39  RFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNV 98
           R     +D      ++ V+ + +   G++D++V NAGV       ++         + NV
Sbjct: 74  RIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINV 133
Query: 99  FGPMRLVQAVVPHMAY-RKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG 157
            G    V A  P +    + G II + S       P+   YTASK A+  L      ELG
Sbjct: 134 TGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLARAFAAELG 193
Query: 158 HFGI 161
              I
Sbjct: 194 KHSI 197

>pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 16/119 (13%)
Query: 54  QNVLSNVLEKFGKIDVLVNNAGVQCVGPLAE----------VPLSA-MEQTFNTNVFGPM 102
           ++++      FG+ DVLVNNA      PL             P+ A + + F +N   P+
Sbjct: 82  EDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPL 141
Query: 103 RLVQAVVPHM----AYRKKG-KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
            L++A         A+R +   ++N+       P P    YT +K AL  LT    LEL
Sbjct: 142 FLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALEL 200

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 69/173 (39%), Gaps = 21/173 (12%)
Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFF-----VQELDVLSEQSVQNV 56
           S GGIG A+A A+A +   V     S       E   + +       + ++   +SV+  
Sbjct: 42  SSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEET 101
Query: 57  LSNVLEKFGKIDVLVNNAGVQCV-GPLAEVP-LSAMEQTFNTNVFGPMRLVQAVVPHMAY 114
           +S   + FG IDV V NAGV    GP  +V    +  +  + ++ G       +      
Sbjct: 102 ISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKK 161
Query: 115 RKKGKIINVGSVT--------VAAPGPWAGTYTASKAALHSLTDTLRLELGHF 159
             KG +I   S++        + AP      Y  +KAA   L  +L +E   F
Sbjct: 162 NGKGSLIITSSISGKIVNIPQLQAP------YNTAKAACTHLAKSLAIEWAPF 208

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 7/159 (4%)
Query: 5   GIGHALARAFAASDCRV------VATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLS 58
           GIG A+AR  AA    +       A G  +   A +       +   DV + +  + VL 
Sbjct: 37  GIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLE 96
Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQ-AVVPHMAYRKK 117
           + + + G    +V+NAG+        +     +   +TN+     ++Q  ++P +  R+ 
Sbjct: 97  HEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQG 156
Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
           G+II + SV+          Y+A+KA +   T  L +EL
Sbjct: 157 GRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIEL 195

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 73/187 (39%), Gaps = 35/187 (18%)
Query: 6   IGHALARAFAASDCRVVA----TGRSKATMAD---LEQDPRFFVQELDVLSEQ----SVQ 54
           IG A+A     +  RVV     +  +  ++AD    E+     V + D+ +      S +
Sbjct: 15  IGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQADLTNSNVLPASCE 74
Query: 55  NVLSNVLEKFGKIDVLVNNAGVQCVGPLAE----------VPLSAMEQTFNTNVFGPMRL 104
            ++++    FG+ DVLVNNA      PL +             + + +   TN   P  L
Sbjct: 75  EIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLL 134
Query: 105 VQAVVPHMAYRKKG----------KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL 154
             +     A R+KG           I+N+    V  P      Y   K AL  LT +  L
Sbjct: 135 TMS----FAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGLTQSAAL 190
Query: 155 ELGHFGI 161
           EL  +GI
Sbjct: 191 ELAPYGI 197

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 73/187 (39%), Gaps = 35/187 (18%)
Query: 6   IGHALARAFAASDCRVVA----TGRSKATMAD---LEQDPRFFVQELDVLSEQ----SVQ 54
           IG A+A     +  RVV     +  +  ++AD    E+     V + D+ +      S +
Sbjct: 35  IGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQADLTNSNVLPASCE 94
Query: 55  NVLSNVLEKFGKIDVLVNNAGVQCVGPLAE----------VPLSAMEQTFNTNVFGPMRL 104
            ++++    FG+ DVLVNNA      PL +             + + +   TN   P  L
Sbjct: 95  EIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLL 154
Query: 105 VQAVVPHMAYRKKG----------KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL 154
             +     A R+KG           I+N+    V  P      Y   K AL  LT +  L
Sbjct: 155 TMS----FAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGLTQSAAL 210
Query: 155 ELGHFGI 161
           EL  +GI
Sbjct: 211 ELAPYGI 217

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 73/187 (39%), Gaps = 35/187 (18%)
Query: 6   IGHALARAFAASDCRVVA----TGRSKATMAD---LEQDPRFFVQELDVLSEQ----SVQ 54
           IG A+A     +  RVV     +  +  ++AD    E+     V + D+ +      S +
Sbjct: 15  IGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQADLTNSNVLPASCE 74
Query: 55  NVLSNVLEKFGKIDVLVNNAGVQCVGPLAE----------VPLSAMEQTFNTNVFGPMRL 104
            ++++    FG+ DVLVNNA      PL +             + + +   TN   P  L
Sbjct: 75  EIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLL 134
Query: 105 VQAVVPHMAYRKKG----------KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL 154
             +     A R+KG           I+N+    V  P      Y   K AL  LT +  L
Sbjct: 135 TMS----FAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAAL 190
Query: 155 ELGHFGI 161
           EL  +GI
Sbjct: 191 ELAPYGI 197

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 73/187 (39%), Gaps = 35/187 (18%)
Query: 6   IGHALARAFAASDCRVVA----TGRSKATMAD---LEQDPRFFVQELDVLSEQ----SVQ 54
           IG A+A     +  RVV     +  +  ++AD    E+     V + D+ +      S +
Sbjct: 35  IGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQADLTNSNVLPASCE 94
Query: 55  NVLSNVLEKFGKIDVLVNNAGVQCVGPLAE----------VPLSAMEQTFNTNVFGPMRL 104
            ++++    FG+ DVLVNNA      PL +             + + +   TN   P  L
Sbjct: 95  EIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLL 154
Query: 105 VQAVVPHMAYRKKG----------KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL 154
             +     A R+KG           I+N+    V  P      Y   K AL  LT +  L
Sbjct: 155 TMS----FAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAAL 210
Query: 155 ELGHFGI 161
           EL  +GI
Sbjct: 211 ELAPYGI 217

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 51/130 (39%), Gaps = 24/130 (18%)
Query: 52  SVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAE----------VPLSAMEQTFNTNVFGP 101
           S + ++++    FG+ DVLVNNA      PL +             + + +   TN   P
Sbjct: 72  SCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAP 131
Query: 102 MRLVQAVVPHMAYRKKG----------KIINVGSVTVAAPGPWAGTYTASKAALHSLTDT 151
             L  +     A R+KG           I+N+    V  P      Y   K AL  LT +
Sbjct: 132 FLLTMS----FAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQS 187
Query: 152 LRLELGHFGI 161
             LEL  +GI
Sbjct: 188 AALELAPYGI 197

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 51/130 (39%), Gaps = 24/130 (18%)
Query: 52  SVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAE----------VPLSAMEQTFNTNVFGP 101
           S + ++++    FG+ DVLVNNA      PL +             + + +   TN   P
Sbjct: 92  SCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAP 151
Query: 102 MRLVQAVVPHMAYRKKG----------KIINVGSVTVAAPGPWAGTYTASKAALHSLTDT 151
             L  +     A R+KG           I+N+    V  P      Y   K AL  LT +
Sbjct: 152 FLLTMS----FAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGLTQS 207
Query: 152 LRLELGHFGI 161
             LEL  +GI
Sbjct: 208 AALELAPYGI 217

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 51/130 (39%), Gaps = 24/130 (18%)
Query: 52  SVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAE----------VPLSAMEQTFNTNVFGP 101
           S + ++++    FG+ DVLVNNA      PL +             + + +   TN   P
Sbjct: 92  SCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAP 151
Query: 102 MRLVQAVVPHMAYRKKG----------KIINVGSVTVAAPGPWAGTYTASKAALHSLTDT 151
             L  +     A R+KG           I+N+    V  P      Y   K AL  LT +
Sbjct: 152 FLLTMS----FAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQS 207
Query: 152 LRLELGHFGI 161
             LEL  +GI
Sbjct: 208 AALELAPYGI 217

>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 8/125 (6%)
Query: 35  EQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPL---AEVPLSAME 91
           +Q  +  + + D+ +E+ V  +     ++FGK+D+ +N  G     P+   +E    AM+
Sbjct: 60  DQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMD 119
Query: 92  QTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDT 151
            T N  V      ++    HM     G II + +  +AA   +  TY  +KA +   T  
Sbjct: 120 -TINNKV--AYFFIKQAAKHM--NPNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRA 174
Query: 152 LRLEL 156
              EL
Sbjct: 175 ASKEL 179

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	162
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	1e-55
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	2e-54
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-53
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	4e-50
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	5e-48
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	1e-45
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	4e-45
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	6e-45
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	1e-44
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	6e-44
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	3e-43
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	4e-43
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	6e-43
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	9e-43
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	1e-42
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	2e-42
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	2e-42
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	3e-42
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	3e-42
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	5e-42
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	6e-42
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	6e-42
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	1e-41
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	2e-41
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	5e-41
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	7e-41
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	8e-41
1xkq_A	280	Short-chain reductase family member (5D234); parra	9e-41
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	1e-40
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	1e-40
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	1e-40
1xhl_A	297	Short-chain dehydrogenase/reductase family member	2e-40
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	2e-40
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	2e-40
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	3e-40
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	3e-40
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	3e-40
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	4e-40
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	6e-40
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	8e-40
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	9e-40
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	1e-39
1spx_A	278	Short-chain reductase family member (5L265); paral	1e-39
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	1e-39
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	3e-39
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	5e-39
3cxt_A	291	Dehydrogenase with different specificities; rossma	7e-39
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	8e-39
4dqx_A	277	Probable oxidoreductase protein; structural genomi	8e-39
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	1e-38
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	1e-38
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	1e-38
4e4y_A	244	Short chain dehydrogenase family protein; structur	1e-38
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	2e-38
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	2e-38
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	2e-38
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	2e-38
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	4e-38
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	6e-38
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	6e-38
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	6e-38
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	1e-37
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	2e-37
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	2e-37
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	3e-37
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	4e-37
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	5e-37
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	5e-37
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	6e-37
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	7e-37
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	8e-37
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	9e-37
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	9e-37
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	9e-37
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	1e-36
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	1e-36
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	1e-36
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	2e-36
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-36
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	2e-36
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	2e-36
1xq1_A	266	Putative tropinone reducatse; structural genomics,	2e-36
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	2e-36
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	2e-36
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	3e-36
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	4e-36
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	4e-36
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	4e-36
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	5e-36
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	5e-36
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	6e-36
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	6e-36
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	9e-36
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	1e-35
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	1e-35
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	1e-35
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	1e-35
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	1e-35
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	2e-35
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	2e-35
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	2e-35
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	2e-35
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	2e-35
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	2e-35
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	2e-35
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	2e-35
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	2e-35
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	3e-35
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	3e-35
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	4e-35
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	6e-35
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	6e-35
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	7e-35
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	7e-35
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-34
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	1e-34
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	3e-34
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	4e-34
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	4e-34
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	5e-34
3imf_A	257	Short chain dehydrogenase; structural genomics, in	6e-34
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	1e-33
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	2e-33
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	2e-33
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	2e-33
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	2e-33
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	4e-33
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	8e-33
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	2e-32
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	3e-32
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	4e-32
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	5e-32
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	7e-32
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	1e-31
3rih_A	293	Short chain dehydrogenase or reductase; structural	3e-31
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	5e-31
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	1e-30
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	1e-30
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	3e-30
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	4e-30
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	5e-30
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	1e-29
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	2e-29
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	2e-29
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	4e-29
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	9e-29
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	1e-28
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	1e-28
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	1e-28
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	1e-28
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	2e-28
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	6e-28
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	7e-28
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	9e-28
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	9e-28
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	1e-27
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	1e-27
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	1e-27
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	2e-27
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	2e-27
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	2e-27
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	1e-26
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	2e-26
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	4e-26
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	6e-26
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	2e-25
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	2e-25
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	3e-25
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-25
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	4e-25
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	4e-25
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	5e-25
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	5e-25
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	5e-25
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	2e-24
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	2e-24
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	1e-23
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	1e-21
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	2e-21
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	4e-21
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	2e-20
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	4e-20
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-19
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-17
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	8e-18
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	3e-17
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	5e-13
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	1e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  175 bits (445), Expect = 1e-55
 Identities = 57/164 (34%), Positives = 82/164 (50%), Gaps = 3/164 (1%)

Query: 1   CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLS 58
            S G  G A+A A  A+   V+ T R    + DL      R     LDV   + +  V +
Sbjct: 13  ASSG-FGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAA 71

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
           +VL ++G++DVLVNNAG   VG   E     +   F  +VFGP RL +A++P M  R  G
Sbjct: 72  DVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSG 131

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
            ++N+ S            Y+A+KAAL  L++ L  E+  FGI 
Sbjct: 132 SVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIK 175

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score =  173 bits (441), Expect = 2e-54
 Identities = 58/173 (33%), Positives = 82/173 (47%), Gaps = 14/173 (8%)

Query: 1   CSQGGIGHALARAFAASD---CRVVATGRSKATMADLEQ--------DPRFFVQELDVLS 49
           CS  GIG  LA   A+      +V AT R   T   L +               +LDV  
Sbjct: 10  CS-SGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRD 68

Query: 50  EQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVV 109
            +SV      V E  G++DVLV NAG+  +GPL  +   A+    + NV G +R++QA +
Sbjct: 69  SKSVAAARERVTE--GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFL 126

Query: 110 PHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           P M  R  G+++  GSV      P+   Y ASK AL  L ++L + L  FG+ 
Sbjct: 127 PDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVH 179

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score =  171 bits (434), Expect = 2e-53
 Identities = 47/169 (27%), Positives = 75/169 (44%), Gaps = 11/169 (6%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD----------PRFFVQELDVLSEQSVQ 54
           G G   A A A +  RV A+ R          +                ELDV S+ SV 
Sbjct: 16  GFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVD 75

Query: 55  NVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY 114
             +  ++ + G+IDVL++NAG    GP          + ++ NV    R+ +A +PHM  
Sbjct: 76  RAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRR 135

Query: 115 RKKGKIINVGSV-TVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           +K G +I + S  +     P+   Y A+KAA+ ++      EL  +GI+
Sbjct: 136 QKHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELSRWGIE 184

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  159 bits (405), Expect = 4e-50
 Identities = 31/159 (19%), Positives = 57/159 (35%), Gaps = 3/159 (1%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLE 62
           G+G AL         +V   GR    +   E            D+   + V    +  +E
Sbjct: 14  GLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVE 73

Query: 63  KFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIIN 122
             G  +++++ AG    GP+       + +   +N+   + + Q  V  +   + G + N
Sbjct: 74  WGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIG-ERGGVLAN 132

Query: 123 VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           V S            Y ASK  +    ++LR EL    +
Sbjct: 133 VLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPL 171

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  155 bits (395), Expect = 5e-48
 Identities = 34/164 (20%), Positives = 60/164 (36%), Gaps = 7/164 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD------PRFFVQELDVLSEQSVQNVLS 58
           GIG  +A   A     VV T RSK T+  +                  +      +  ++
Sbjct: 39  GIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVA 98

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
              +  G +D+L+ N        L    +  + ++   N    + L  A +P +  +  G
Sbjct: 99  QAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLK-QSNG 157

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
            I+ V S+      P    Y+ASK AL     ++R E     ++
Sbjct: 158 SIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVN 201

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  148 bits (375), Expect = 1e-45
 Identities = 48/158 (30%), Positives = 68/158 (43%), Gaps = 1/158 (0%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEK 63
           GIG A AR   A   RV    R +  +  L  +         DV  E      ++ + E 
Sbjct: 16  GIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEA 75

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
           FG++  LVNNAGV  + P+ E+ L       +TN+ G    ++  VP +  R  G I+NV
Sbjct: 76  FGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNV 135

Query: 124 GSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           GS+    P      Y ASK  L  L     L+L    +
Sbjct: 136 GSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANV 173

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  148 bits (375), Expect = 4e-45
 Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 1/157 (0%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           GIG A+AR F+     ++   R    +  L         ++DV  + +    ++   + +
Sbjct: 27  GIGEAIARRFSEEGHPLLLLARRVERLKALNLP-NTLCAQVDVTDKYTFDTAITRAEKIY 85

Query: 65  GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG 124
           G  D +VNNAG+  +G +     +  ++ F+ NV G +  +QAV+  M  R  G IIN+ 
Sbjct: 86  GPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINIS 145

Query: 125 SVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           S+      P    Y  +K A+H++++ +R E+    +
Sbjct: 146 SIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNV 182

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  146 bits (371), Expect = 6e-45
 Identities = 33/159 (20%), Positives = 66/159 (41%), Gaps = 6/159 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLE 62
           G+G  LA+ + A       TGRS++ ++ +          +  D+ S Q V+ +   +  
Sbjct: 12  GLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQL-- 69

Query: 63  KFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIIN 122
                  +V++AG    G L E     ++     N+   + +++ +V      +   ++ 
Sbjct: 70  -DSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYK-DQPVNVVM 127

Query: 123 VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           + S     P     TY A K A+  L +++RLEL    +
Sbjct: 128 IMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPM 166

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  145 bits (367), Expect = 1e-44
 Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 10/159 (6%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
           GG+G A ARA       ++ +GR    +A+L ++        D+  E   + +L    E+
Sbjct: 10  GGLGGAFARALKG--HDLLLSGRRAGALAELAREVGARALPADLADELEAKALL----EE 63

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
            G +D+LV+  G      + E     +E+    ++         V+ H  ++K  + +  
Sbjct: 64  AGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAA----FVLKHARFQKGARAVFF 119

Query: 124 GSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           G+       P    Y A+K AL +  +  R EL   G+ 
Sbjct: 120 GAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVH 158

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  144 bits (366), Expect = 6e-44
 Identities = 46/165 (27%), Positives = 70/165 (42%), Gaps = 9/165 (5%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD--------PRFFVQELDVLSEQSVQNV 56
           GIG  +A   A    RVV   RSK  +  +  +            V  LD+         
Sbjct: 18  GIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTE 77

Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
           + ++ +K+G +D+LVN A +   G L+E P+    +    NV     +++ V   M  +K
Sbjct: 78  IKDIHQKYGAVDILVNAAAMFMDGSLSE-PVDNFRKIMEINVIAQYGILKTVTEIMKVQK 136

Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            G I NV S          G Y ++K AL  L ++L  EL   GI
Sbjct: 137 NGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGI 181

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  142 bits (361), Expect = 3e-43
 Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 6/162 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVLSN 59
           GIG A ARA AA    V    R    +  L  +      +  V ELDV   Q V   +++
Sbjct: 18  GIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVAS 77

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
            +E  G +D+LVNNAG+  +GP+ +   +   +  +TN+ G M + +A +PH+  R KG 
Sbjct: 78  TVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLL-RSKGT 136

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           ++ + S+        A  Y A+K  +++ ++TLR E+   G+
Sbjct: 137 VVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGV 178

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  142 bits (361), Expect = 4e-43
 Identities = 51/156 (32%), Positives = 83/156 (53%), Gaps = 5/156 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVLSN 59
           GIG  +AR    +  +++   R +A +  +  +          Q LDV    SV      
Sbjct: 15  GIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQA 74

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
            ++ +G+IDVLVNNAGV  + PLA V +   E+  + N+ G +  + AV+P M  ++ G+
Sbjct: 75  AVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQ 134

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
           IIN+GS+   +  P A  Y A+K A+ +++D LR E
Sbjct: 135 IINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE 170

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  141 bits (359), Expect = 6e-43
 Identities = 49/162 (30%), Positives = 87/162 (53%), Gaps = 7/162 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLE 62
           G G  + R F     +V+ATGR +  + +L+ +     ++ +LDV +  +++ +L+++  
Sbjct: 11  GFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPA 70

Query: 63  KFGKIDVLVNNAGVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
           ++  ID+LVNNAG+   + P  +  +   E   +TN  G + + +AV+P M  R  G II
Sbjct: 71  EWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHII 130

Query: 122 NVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
           N+GS   A   P+AG   Y A+KA +   +  LR +L    +
Sbjct: 131 NIGS--TAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAV 170

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  141 bits (359), Expect = 9e-43
 Identities = 41/165 (24%), Positives = 62/165 (37%), Gaps = 7/165 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRS----KATMADLEQDP---RFFVQELDVLSEQSVQNV 56
            GIG A       +   V    R     +A  + L Q     R F    DVL    V+  
Sbjct: 18  SGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAF 77

Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
                   G   +LVNNAG   V   AE    A  +      F  +  V+A +P +  R 
Sbjct: 78  AEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRA 137

Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
              I+ V S+  + P P     +A++A + +L  ++  E    G+
Sbjct: 138 DAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGV 182

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  141 bits (358), Expect = 1e-42
 Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 11/167 (6%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD-------PRFFVQELDVLSEQSVQNVL 57
           GIG A+ARA      +VV   R+   + +L  +               D+ +E+ + ++ 
Sbjct: 43  GIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMF 102

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK- 116
           S +  +   +D+ +NNAG+     L     S  +  FN NV       +     M  R  
Sbjct: 103 SAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNV 162

Query: 117 -KGKIINVGSVT--VAAPGPWAGTYTASKAALHSLTDTLRLELGHFG 160
             G IIN+ S++     P      Y+A+K A+ +LT+ LR EL    
Sbjct: 163 DDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQ 209

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  141 bits (357), Expect = 2e-42
 Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 6/163 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           G G A AR FA +   +V TGR     +A   +L    R     LDV    ++   + N+
Sbjct: 32  GFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNL 91

Query: 61  LEKFGKIDVLVNNAGV-QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
            E+F  +  L+NNAG+     P     L   +   +TN+ G +   + ++P +     G 
Sbjct: 92  PEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGA 151

Query: 120 -IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            I+N+GSV    P P +  Y  +KA +   +  LR +L   G+
Sbjct: 152 SIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGV 194

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  140 bits (355), Expect = 2e-42
 Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 6/159 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEK 63
           GIG    +A  A+  RVVA  R++A +  L ++ P      +D+   ++ +  L      
Sbjct: 18  GIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERAL----GS 73

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK-GKIIN 122
            G +D+LVNNA V  + P  EV   A +++F  N+   +++ Q V   +  R   G I+N
Sbjct: 74  VGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVN 133

Query: 123 VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           V S            Y ++K AL  LT  + LELG   I
Sbjct: 134 VSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKI 172

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  140 bits (355), Expect = 3e-42
 Identities = 48/166 (28%), Positives = 70/166 (42%), Gaps = 6/166 (3%)

Query: 2   SQGGIGHALARAFAASDCRVVATGRS----KATMADLEQDP--RFFVQELDVLSEQSVQN 55
           S  GIG A+A  FA     +V   R           L++    R     +DV + + V  
Sbjct: 15  SSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDA 74

Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
           V+ +V   FG  D+LVNNAG      + E      +  +   V   +RL + +VP M  R
Sbjct: 75  VVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRAR 134

Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             G II+  S+    P  +   Y  +KAAL   + TL  E+    I
Sbjct: 135 GGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNI 180

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  139 bits (354), Expect = 3e-42
 Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 6/159 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEK 63
           GIG    +A  AS  +VVA  R+ + +  L ++ P      +D+    + +  L      
Sbjct: 18  GIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKAL----GG 73

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK-GKIIN 122
            G +D+LVNNA +  + P  EV   A +++F+ N+    ++ Q V   M  R   G I+N
Sbjct: 74  IGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVN 133

Query: 123 VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           V S+      P   TY+++K A+  LT  + +ELG   I
Sbjct: 134 VSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKI 172

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  139 bits (354), Expect = 5e-42
 Identities = 51/159 (32%), Positives = 70/159 (44%), Gaps = 4/159 (2%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADL--EQDPRFFVQELDVLSEQSVQNVLSNVLE 62
           GIG A A+ F A   RV  TGR K  +     E        + D  +   +  +   V  
Sbjct: 40  GIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKA 99

Query: 63  KFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIIN 122
           + G+IDVL  NAG   + PL EV     + TF+ NV G +  VQ  +P +   +   ++ 
Sbjct: 100 EAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLL--ARGSSVVL 157

Query: 123 VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            GS   +   P    Y ASKAAL S      L+L   GI
Sbjct: 158 TGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGI 196

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  139 bits (353), Expect = 6e-42
 Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 4/160 (2%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVL 61
            G+G A  R        V+ TGR+++ +A + ++  PR      D+     +  + +   
Sbjct: 18  HGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAG 77

Query: 62  EKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
           +  G ID+L  NAGV  + P  +V  ++ ++ F  N  G    VQ + P +  R+ G I+
Sbjct: 78  QTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLI--REGGSIV 135

Query: 122 NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
              SV      P    Y+ASKAAL S    L  EL   GI
Sbjct: 136 FTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGI 175

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  138 bits (351), Expect = 6e-42
 Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 7/157 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADL------EQDPRFFVQELDVLSEQSVQNVLS 58
           GIG A+ARA A     +    RS   +  +      EQ    F   LDV   +SV+    
Sbjct: 13  GIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSK 72

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
            VLE+FG +DV+V NAG+     L E+      +    N+ G  R ++A +  +      
Sbjct: 73  KVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGL 132

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
            ++    V  A   P+ G Y ++K A  +L  T ++E
Sbjct: 133 ALVTTSDV-SARLIPYGGGYVSTKWAARALVRTFQIE 168

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  138 bits (350), Expect = 1e-41
 Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 6/156 (3%)

Query: 5   GIGHALARAFAASDCRVV--ATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNV 60
           GIG ++     + D   V     RS+A +  L++    RFF    D+  +  ++ +++  
Sbjct: 13  GIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAA 72

Query: 61  LEKFGKIDVLVNNAGVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
           ++  GKID LV NAGV   V  + E+ ++A ++ ++ N F  + LV   +P +  +  G 
Sbjct: 73  VKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELK-KTNGN 131

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
           ++ V S          G Y +SKAAL+    TL  E
Sbjct: 132 VVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE 167

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  138 bits (351), Expect = 2e-41
 Identities = 53/165 (32%), Positives = 71/165 (43%), Gaps = 7/165 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD------PRFFVQELDVLSEQSVQNVL 57
            GIG  +ARAFAA+  R+V +GR  + +    +              +D+    +   + 
Sbjct: 30  KGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELA 89

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
               E FG +DVLVNNAG+    P+ +      + T   N+  P  L  AV   M    +
Sbjct: 90  RRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGE 149

Query: 118 -GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            G II V S    AP P    Y  SKA L   T  L  ELG  GI
Sbjct: 150 GGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGI 194

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  137 bits (347), Expect = 5e-41
 Identities = 46/163 (28%), Positives = 71/163 (43%), Gaps = 6/163 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD---PRFFVQELDVLSEQSVQNVLSNV 60
            GIG  + RAFAAS  R++   R  A +    Q+           DV   +++    +  
Sbjct: 21  SGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEA 80

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
            E    + +LVN+AG+  +    E   +   Q    NV G     +A    M  R  G I
Sbjct: 81  -EAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAI 139

Query: 121 INVGSVT--VAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +N+GS++  +     +A +Y ASK A+H LT  L  E    G+
Sbjct: 140 VNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGV 182

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  137 bits (347), Expect = 7e-41
 Identities = 41/163 (25%), Positives = 62/163 (38%), Gaps = 5/163 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVLSN 59
           GIG   A  FA    ++V    +K  + +          +     +D  + + + +    
Sbjct: 42  GIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKK 101

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
           V  + G + +LVNNAGV     L       +E+TF  NV       +A +P M     G 
Sbjct: 102 VKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGH 161

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           I+ V S       P+   Y +SK A      TL  EL    I 
Sbjct: 162 IVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQIT 204

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  136 bits (346), Expect = 8e-41
 Identities = 40/163 (24%), Positives = 63/163 (38%), Gaps = 6/163 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQD-PRFFVQELDVLSEQSVQNVLSN 59
           GIG+A+    A    RV    R+       +    +          D+LS      ++  
Sbjct: 32  GIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQT 91

Query: 60  VLEKF-GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
           V   F GK+++LVNNAGV       +           TN      L Q   P +   + G
Sbjct: 92  VAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNG 151

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            +I + S+   +  P    Y+ASK A++ +T +L  E     I
Sbjct: 152 NVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNI 194

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  136 bits (346), Expect = 9e-41
 Identities = 52/171 (30%), Positives = 77/171 (45%), Gaps = 16/171 (9%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD--------PRFFVQELDVLSEQSVQNV 56
           GIG   A  FA     V  TGRS   + +  Q          +      DV +E     +
Sbjct: 17  GIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQI 76

Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLA----EVPLSAMEQTFNTNVFGPMRLVQAVVPHM 112
           +++ L++FGKIDVLVNNAG            +  +    +T   N+   + + + V PH+
Sbjct: 77  INSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHL 136

Query: 113 AYRKKGKIINVGSVTVAAPGPWAGT--YTASKAALHSLTDTLRLELGHFGI 161
               KG+I+NV S+ VA P        Y  +KAAL   T +  ++L  FGI
Sbjct: 137 V-ASKGEIVNVSSI-VAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGI 185

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  136 bits (344), Expect = 1e-40
 Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 6/163 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVLSN 59
           G+G A A   AA+  RV+        +A+                 DV  E +++   S 
Sbjct: 20  GLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSK 79

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK-G 118
           +  +   +D+L+NNAG+Q   P+ E+ L   ++  +TN+     + ++    M  R   G
Sbjct: 80  LDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGG 139

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           KIIN+GS+T  A  P    YTA+K  +  LT ++  E   F I
Sbjct: 140 KIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNI 182

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  136 bits (345), Expect = 1e-40
 Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 9/164 (5%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPR--FFVQELDVLSEQSVQNVLS 58
            +G  LAR  A     +V   R+    +     +    R    V   D+  +  V +++ 
Sbjct: 22  ALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVG-TDITDDAQVAHLVD 80

Query: 59  NVLEKFGKIDVLVNNAGVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             ++ +G++DV++NNA     + P A      M       VFG +RL+Q   P +    K
Sbjct: 81  ETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALE-ESK 139

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G ++NV S+ V       G Y  +K+AL +++ TL  ELG  GI
Sbjct: 140 GAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGI 183

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  136 bits (345), Expect = 1e-40
 Identities = 39/171 (22%), Positives = 61/171 (35%), Gaps = 14/171 (8%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQEL------------DVLSEQS 52
           GIG A+A   A     V    +S      L          +            D+  E  
Sbjct: 17  GIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQ 76

Query: 53  VQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM 112
           V+  ++  ++ FG ID+LVNNA    +    + P+   +     N  G     QA +PH+
Sbjct: 77  VRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHL 136

Query: 113 AYRKKGKIINVGSVTVAAPGPWAGT--YTASKAALHSLTDTLRLELGHFGI 161
                  I+ +       P  W     YT +K  +  +T  L  E G  G+
Sbjct: 137 LQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAEFGPQGV 187

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  136 bits (346), Expect = 2e-40
 Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 14/169 (8%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD--------PRFFVQELDVLSEQSVQNV 56
           GIG + A  FA    +V  TGR++  + + +Q          +      DV       ++
Sbjct: 37  GIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDI 96

Query: 57  LSNVLEKFGKIDVLVNNAGVQCVG--PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY 114
           ++  L KFGKID+LVNNAG          + P+   ++TF  N    + + Q    H+  
Sbjct: 97  INTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLI- 155

Query: 115 RKKGKIINVGSVTVAAPGPWAGT--YTASKAALHSLTDTLRLELGHFGI 161
           + KG+I+NV S+ VA P   +G   Y  +KAAL   T    ++L   G+
Sbjct: 156 KTKGEIVNVSSI-VAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGV 203

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  135 bits (343), Expect = 2e-40
 Identities = 36/163 (22%), Positives = 63/163 (38%), Gaps = 6/163 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQD-PRFFVQELDVLSEQSVQNVLSN 59
           GIG+ +    A+    V    R+       +        +      D+ S    Q +++ 
Sbjct: 20  GIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNT 79

Query: 60  VLEKF-GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
           V   F GK+++LVNNAG+       +  +       + N      L     P +   ++G
Sbjct: 80  VANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERG 139

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            ++ + SV+ A   P+   Y A+K A+  LT  L  E     I
Sbjct: 140 NVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNI 182

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  136 bits (344), Expect = 2e-40
 Identities = 48/166 (28%), Positives = 71/166 (42%), Gaps = 9/166 (5%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           GIG  +A+    +  RV    R       T   L           D+ SE   + +   +
Sbjct: 40  GIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQAL 99

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM----AYRK 116
            E   ++D+LVNNAG      L   P+S  E+    NV      +Q ++P +    +   
Sbjct: 100 GELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAEN 159

Query: 117 KGKIINVGSVT-VAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             ++IN+GSV  ++A G  A  Y  SKAALH L+  L  EL    I
Sbjct: 160 PARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHI 205

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  136 bits (344), Expect = 3e-40
 Identities = 42/171 (24%), Positives = 66/171 (38%), Gaps = 15/171 (8%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQEL------------DVLSEQS 52
           GIG A+A+  AA    V    +S      L        +E+            D+    +
Sbjct: 20  GIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDA 79

Query: 53  VQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM 112
           V   ++  +E+FG ID+ VNNA    +G + EVPL   +      V G   + Q+ +PHM
Sbjct: 80  VAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHM 139

Query: 113 AYRKKGKIINVGSVTVAAPGPWAGT--YTASKAALHSLTDTLRLELGHFGI 161
             R    I+ +    +     W     Y  +K  +      +  EL   GI
Sbjct: 140 KGRDNPHILTLSPP-IRLEPKWLRPTPYMMAKYGMTLCALGIAEELRDAGI 189

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  135 bits (341), Expect = 3e-40
 Identities = 33/162 (20%), Positives = 59/162 (36%), Gaps = 6/162 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVLSN 59
            IG  +A+ FAA    V A  R+   +A L  +      R   + LD  +E  V   L+ 
Sbjct: 18  YIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNA 77

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK 119
             +    ++V + N G     P+ E       + +    +      +     M    +GK
Sbjct: 78  A-DAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGK 136

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           I   G+      G     + ++K  L ++  ++  EL    I
Sbjct: 137 IFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNI 178

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  134 bits (341), Expect = 3e-40
 Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 8/164 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPR--FFVQELDVLSEQSVQNVLS 58
           GIG A+AR  A     VV + R       T+A L+ +           V   +  + +++
Sbjct: 25  GIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTV-CHVGKAEDRERLVA 83

Query: 59  NVLEKFGKIDVLVNNAGV-QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             +   G +D+LV+NA V    G + +      ++  + NV   + + +AVVP M  R  
Sbjct: 84  MAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGG 143

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G ++ V SV    P P  G Y  SK AL  LT  L +EL    I
Sbjct: 144 GSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNI 187

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  134 bits (341), Expect = 4e-40
 Identities = 52/164 (31%), Positives = 74/164 (45%), Gaps = 7/164 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD------PRFFVQELDVLSEQSVQNVLS 58
           G+G  +A+  A + C VV   R+    ++  Q               DV + + V+ +L 
Sbjct: 32  GLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLE 91

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
            V EKFGK+D +VN AG+    P  E PL    Q    N+FG   + +     +      
Sbjct: 92  AVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNP 151

Query: 119 KIINVGSVTVAAPG-PWAGTYTASKAALHSLTDTLRLELGHFGI 161
            IIN+GS+TV     P    Y ASK  + SLT  L  E G +GI
Sbjct: 152 SIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGI 195

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  133 bits (338), Expect = 6e-40
 Identities = 27/157 (17%), Positives = 56/157 (35%), Gaps = 10/157 (6%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
           G +G  + + F +     ++    +   AD           +    E+ +++V+  +  K
Sbjct: 32  GALGAEVVKFFKSKSWNTISIDFRENPNAD-------HSFTIKDSGEEEIKSVIEKINSK 84

Query: 64  FGKIDVLVNNAGVQCVG-PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIIN 122
             K+D  V  AG    G   ++  L +++   + N++            +   + G  + 
Sbjct: 85  SIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLL--NQGGLFVL 142

Query: 123 VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHF 159
            G+            Y A+KAA H +   L  E G  
Sbjct: 143 TGASAALNRTSGMIAYGATKAATHHIIKDLASENGGL 179

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  134 bits (340), Expect = 8e-40
 Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 11/168 (6%)

Query: 5   GIGHALARAFAA---SDCRVVATGRSKATMADLEQD-------PRFFVQELDVLSEQSVQ 54
           GIG A A  +      D +++   R    + +L++         +  V +LD+   + ++
Sbjct: 44  GIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIK 103

Query: 55  NVLSNVLEKFGKIDVLVNNAG-VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMA 113
             + N+ ++F  ID+LVNNAG       + ++    ++  F+TNV   + + QAV+P   
Sbjct: 104 PFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQ 163

Query: 114 YRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            +  G I+N+GS+      P    Y ASK A+ + TD+LR EL +  I
Sbjct: 164 AKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELINTKI 211

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  134 bits (340), Expect = 9e-40
 Identities = 38/166 (22%), Positives = 69/166 (41%), Gaps = 9/166 (5%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQD----PRFFVQELDVLSEQSVQNV 56
           GIG  +A    A+   V+  GR+       + +LE           +  D+ +E      
Sbjct: 22  GIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARA 81

Query: 57  LSNVLEKFGKIDVLVNNAGV-QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
           +  V    G++  +V+ AG  + +GP+ +V   A  +T + NV G M +++     M   
Sbjct: 82  VDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRG 141

Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             G  + + S+  +    W G Y  +K+A+  L      ELG   +
Sbjct: 142 GGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASWV 187

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  133 bits (337), Expect = 1e-39
 Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 3/158 (1%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
           GG+G  + +  +  D  V A GR+   +A L +       E D++ E   +  +   L+ 
Sbjct: 15  GGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVD-KLKN 72

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
              +D LV+ A V     +    ++      + NV  P  L + ++P +     G +I +
Sbjct: 73  LDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALR-AASGCVIYI 131

Query: 124 GSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            S     P P    Y ASK AL  L D  R E  + GI
Sbjct: 132 NSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGI 169

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  134 bits (339), Expect = 1e-39
 Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 16/171 (9%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD--------PRFFVQELDVLSEQSVQNV 56
           GIG A A  FA    +V  TGR    + +  Q                 DV ++     +
Sbjct: 17  GIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEI 76

Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGP----LAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM 112
           LS  L KFGK+D+LVNNAG               + + + T N N+   + L +  VPH+
Sbjct: 77  LSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHL 136

Query: 113 AYRKKGKIINVGSVTVAAPGPWAGT--YTASKAALHSLTDTLRLELGHFGI 161
           +   KG+I+N+ S+  +          Y+ +KAA+   T    ++L   GI
Sbjct: 137 S-STKGEIVNISSI-ASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGI 185

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  133 bits (336), Expect = 1e-39
 Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 5/158 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
            GIG+A A AF  +  +V    ++       ++   F  + +DV     V  V   +L +
Sbjct: 17  KGIGYATALAFVEAGAKVTGFDQAFT-----QEQYPFATEVMDVADAAQVAQVCQRLLAE 71

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
             ++D LVN AG+  +G   ++     +QTF  NV G   L Q  +     ++ G I+ V
Sbjct: 72  TERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTV 131

Query: 124 GSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            S     P      Y ASKAAL SL  ++ LEL   G+
Sbjct: 132 ASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGV 169

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  132 bits (335), Expect = 3e-39
 Identities = 50/158 (31%), Positives = 71/158 (44%), Gaps = 6/158 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
           GGIG A+  A  A+  RV    R+ A +A             D+        +   V   
Sbjct: 38  GGIGGAVVTALRAAGARVAVADRAVAGIAAD------LHLPGDLREAAYADGLPGAVAAG 91

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
            G++D++VNNAGV   G + E   +    +   NV  P R+ +A +P MA    G I+NV
Sbjct: 92  LGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNV 151

Query: 124 GSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            S     PGP    Y  +KAAL SLT  + ++    GI
Sbjct: 152 ASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQGI 189

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  131 bits (333), Expect = 5e-39
 Identities = 47/157 (29%), Positives = 62/157 (39%), Gaps = 1/157 (0%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           GIG A+A+AFA     V             E     F Q +D+  E+     +       
Sbjct: 17  GIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQ-VDLEDERERVRFVEEAAYAL 75

Query: 65  GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG 124
           G++DVLVNNA +   G    V L    +    N+  PM L       M     G I+NV 
Sbjct: 76  GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVA 135

Query: 125 SVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           SV           Y ASK  L +LT +L L+L    I
Sbjct: 136 SVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRI 172

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  131 bits (331), Expect = 8e-39
 Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 7/159 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           GIG A A AFA    +V+AT  +++ + +LE+ P    + LDV  ++ +         + 
Sbjct: 17  GIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFA----NEV 72

Query: 65  GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG 124
            ++DVL N AG    G + +      + + N NV     +++A +P M  +K G IIN+ 
Sbjct: 73  ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMS 132

Query: 125 SVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
           SV  ++         Y+ +KAA+  LT ++  +    GI
Sbjct: 133 SV-ASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGI 170

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  131 bits (333), Expect = 8e-39
 Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 2/159 (1%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLE 62
           GIG A A  FA +   VV    ++     +  +   + F   +DV S +  ++++     
Sbjct: 38  GIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTA 97

Query: 63  KFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIIN 122
           K+G++DVLVNNAG    G +  +P    ++  + NV G     + V+P M     G IIN
Sbjct: 98  KWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIIN 157

Query: 123 VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             S T  +       Y ASK A+ SLT  + ++    GI
Sbjct: 158 TTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAKEGI 196

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  131 bits (332), Expect = 1e-38
 Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 8/165 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQD-PRFFVQELDVLSEQSVQNVLSN 59
            IG A   A A +  RV+            + DL  +        +DV + +SVQN + +
Sbjct: 24  NIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRS 83

Query: 60  VLEKFGKIDVLVNNAGVQCV-GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
           V E+ G++D+LV  AG+        ++      +  + N+ G  R  QAV   M  +K+G
Sbjct: 84  VHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQG 143

Query: 119 KIINVGSV--TVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            I+ +GS+   +         Y ASKA +H    +L  E    GI
Sbjct: 144 VIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGI 188

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  131 bits (331), Expect = 1e-38
 Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 2/158 (1%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
             G   A   + +   V     S     +LE     + Q L  +SEQ    ++  V   +
Sbjct: 12  FGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQ-LKPMSEQEPAELIEAVTSAY 70

Query: 65  GKIDVLVNNAGVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
           G++DVLV+N        P+ +  +             P  LV AV   M  RK G II +
Sbjct: 71  GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFI 130

Query: 124 GSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            S T   P     TYT+++A   +L + L  ELG + I
Sbjct: 131 TSATPFGPWKELSTYTSARAGACTLANALSKELGEYNI 168

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  131 bits (332), Expect = 1e-38
 Identities = 42/161 (26%), Positives = 65/161 (40%), Gaps = 5/161 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKA---TMADLEQD-PRFFVQELDVLSEQSVQNVLSNV 60
           GIG A+A  +A +   V+A GR+        ++            D+   +   NV   +
Sbjct: 42  GIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEEL 101

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
                ++DVLVNNAG+    P  EV L    +    N+     L ++    M     G+I
Sbjct: 102 -AATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRI 160

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           + + S+     G     Y ASK A+  LT  L  E    G+
Sbjct: 161 VTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGV 201

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  130 bits (329), Expect = 1e-38
 Identities = 35/159 (22%), Positives = 73/159 (45%), Gaps = 12/159 (7%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           GIG A+      +    V     + + +        F++  D+  +Q + NVL  +  K 
Sbjct: 15  GIGKAVVELLLQNKNHTVINIDIQQSFSAENLK---FIK-ADLTKQQDITNVLDII--KN 68

Query: 65  GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG 124
              D +  NAG+   G + ++ + ++++  + NV+  +  ++ +  ++  +    I+  G
Sbjct: 69  VSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNL--KVGASIVFNG 126

Query: 125 SVT--VAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           S    +A P  +A  YT SK A+  +T +L L+L  + I
Sbjct: 127 SDQCFIAKPNSFA--YTLSKGAIAQMTKSLALDLAKYQI 163

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  130 bits (329), Expect = 2e-38
 Identities = 34/165 (20%), Positives = 59/165 (35%), Gaps = 14/165 (8%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQEL-----DVLSEQSVQNVLSN 59
             G A   A       VV    S A  A+ +        E        L+EQ  + ++  
Sbjct: 12  FAGPAAVEALTQDGYTVVCHDASFADAAERQ------RFESENPGTIALAEQKPERLVDA 65

Query: 60  VLEKFGKIDVLVNNAGVQCVG---PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
            L+    ID +V+N  +       PL     + + Q F      P+ L+Q+ +  +    
Sbjct: 66  TLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG 125

Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
              +I + S     P  +   Y  ++AA  +L ++    L   GI
Sbjct: 126 GASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGI 170

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  131 bits (331), Expect = 2e-38
 Identities = 43/166 (25%), Positives = 70/166 (42%), Gaps = 8/166 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRS----KATMADLEQD-PRFFVQELDVLSEQSVQNVLS 58
            GIG  +A A+A +  +V    R     +    ++     +      DV     V+ +L 
Sbjct: 42  TGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLD 101

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK- 117
            +  + G ID+ V NAG+  V  + ++PL   ++  +TNV G     QA    M  +   
Sbjct: 102 QMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLG 161

Query: 118 GKIINVGSVT--VAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G II   S++  +         Y  SKAA+  LT  + +EL    I
Sbjct: 162 GTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQI 207

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  130 bits (330), Expect = 2e-38
 Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 5/162 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADL--EQDPRFFVQELDVLSEQSVQNVLSNVLE 62
           G+G A+A A A +   V   GR    + +   E          DV    SV+ + +  +E
Sbjct: 39  GVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVE 98

Query: 63  KFGKIDVLVNNAGVQCVG-PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK--GK 119
           KFG++DVL NNAG      P+ ++  +  +Q  +TN+ GP    Q     M  ++   G+
Sbjct: 99  KFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGR 158

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           IIN GS++  +P P++  YTA+K A+  LT +  L+     I
Sbjct: 159 IINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDI 200

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  130 bits (330), Expect = 2e-38
 Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 5/160 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPR--FFVQELDVLSEQSVQNVLSNVLE 62
           GIG  + RAF  S  RVV   + ++    LEQ+     F+   DV  E  V+ ++S  + 
Sbjct: 20  GIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFIL-CDVTQEDDVKTLVSETIR 78

Query: 63  KFGKIDVLVNNAGVQCVG-PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
           +FG++D +VNNAG         E       Q    N+ G   L +  +P++  + +G +I
Sbjct: 79  RFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLR-KSQGNVI 137

Query: 122 NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           N+ S+  A     A  Y A+K A+ ++T  L L+   +G+
Sbjct: 138 NISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGV 177

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  129 bits (326), Expect = 4e-38
 Identities = 46/159 (28%), Positives = 65/159 (40%), Gaps = 6/159 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           GIG A+A A  A   RV    R+     +  Q         D+  +   + ++   LE  
Sbjct: 13  GIGRAIAEALVARGYRVAIASRNPE---EAAQSLGAVPLPTDL-EKDDPKGLVKRALEAL 68

Query: 65  GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG 124
           G + VLV+ A V    P  E+      +    ++     L QA  PHMA    G+++ +G
Sbjct: 69  GGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIG 128

Query: 125 SVT--VAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           SVT   A        YT +K AL  LT  L  E    GI
Sbjct: 129 SVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGI 167

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  129 bits (326), Expect = 6e-38
 Identities = 38/182 (20%), Positives = 73/182 (40%), Gaps = 26/182 (14%)

Query: 5   GIGHALARAFAASDCR---VVATGRSKATMADL----EQDPRFFVQELDVLSEQSVQNVL 57
           G+G  L +A          +  T R++    +L    +      + E+D+ +  +   ++
Sbjct: 32  GLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLV 91

Query: 58  SNVLEKFG--KIDVLVNNAGV-QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM-- 112
           +++        ++VL NNAG+      +  V    +  T  TN   P+ L +A +P +  
Sbjct: 92  ADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKK 151

Query: 113 ---------AYRKKGKIINV----GSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHF 159
                        +  IIN+    GS+     G     Y  SK+AL++ T +L ++L   
Sbjct: 152 AAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYA-YRTSKSALNAATKSLSVDLYPQ 210

Query: 160 GI 161
            I
Sbjct: 211 RI 212

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  129 bits (326), Expect = 6e-38
 Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 6/161 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           G+G +  RA  A   +VV         KA  A+L    R+    LDV      +  +   
Sbjct: 18  GMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYV--HLDVTQPAQWKAAVDTA 75

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
           +  FG + VLVNNAG+  +G + +  L+  ++  + N+ G    ++AVV  M    +G I
Sbjct: 76  VTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSI 135

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           IN+ S+   A       YTA+K A+  LT +  LELG  GI
Sbjct: 136 INISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGI 176

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  129 bits (326), Expect = 6e-38
 Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 8/163 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPR--FFVQELDVLSEQSVQNVLS 58
           GIG  +A  FA +   VV +  +       + +++Q     F  +  D+ SEQ +  +  
Sbjct: 22  GIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACR-CDITSEQELSALAD 80

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
             + K GK+D+LVNNAG     P  ++P++   + +  NVF    L Q V P M     G
Sbjct: 81  FAISKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGG 139

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            I+ + S+          +Y +SKAA   L   +  +LG   I
Sbjct: 140 VILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNI 182

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  129 bits (326), Expect = 1e-37
 Identities = 43/161 (26%), Positives = 64/161 (39%), Gaps = 6/161 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           GIG A+AR  A   C V+          A    +          +DV  EQ +  ++   
Sbjct: 40  GIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAAC--RVDVSDEQQIIAMVDAC 97

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
           +  FG +D LV NAGV  +  L +  +   ++    N+ G     +   P M  R  G I
Sbjct: 98  VAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAI 157

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +N+ S+         G Y  SKA +  L+     EL   GI
Sbjct: 158 VNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGI 198

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  128 bits (323), Expect = 2e-37
 Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 8/164 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRS-----KATMADLEQDPR--FFVQELDVLSEQSVQNVL 57
           G+G A A   A +   +V            T  ++E+       V+  +V     ++ + 
Sbjct: 15  GVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVK-ANVGQPAKIKEMF 73

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             + E FG++DV VNNA    + P+ E+  +  + T N N    +   Q     M     
Sbjct: 74  QQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGG 133

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G I+++ S+          T   SKAAL +LT  L +EL    I
Sbjct: 134 GHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQI 177

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  128 bits (323), Expect = 2e-37
 Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 6/160 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
            GIG  L RA+   + RVVAT RS    AD    P       D+   ++   ++   +E+
Sbjct: 38  QGIGAGLVRAYRDRNYRVVATSRSIKPSAD----PDIHTVAGDISKPETADRIVREGIER 93

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
           FG+ID LVNNAGV    P  E+     +     NV G   + Q     M  +  G I+++
Sbjct: 94  FGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSI 153

Query: 124 GSV--TVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            +        G  +   + +K  L+++T +L +E    G+
Sbjct: 154 TTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGV 193

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  127 bits (321), Expect = 3e-37
 Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 3/160 (1%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLE 62
           GIG A A A+      V               +  P  +  ++DV  + S+   ++  +E
Sbjct: 19  GIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVE 78

Query: 63  KFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM-AYRKKGKII 121
             G +D+LVNNA +  + P+ E+   + E+ F  NV G +  +QA    M A  + GKII
Sbjct: 79  HAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKII 138

Query: 122 NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           N+ S            Y A+KAA+ SLT +  L+L    I
Sbjct: 139 NMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRI 178

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  127 bits (321), Expect = 4e-37
 Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 6/153 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           GIG A+A  F     +V+         A  +      ++  DV +   V+  + ++ +++
Sbjct: 19  GIGRAIAERFVDEGSKVIDLSIHDPGEAKYD-----HIE-CDVTNPDQVKASIDHIFKEY 72

Query: 65  GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG 124
           G I VLVNNAG++  G +  + +    +  + N+FG     +  +P+M   +   I+N+ 
Sbjct: 73  GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNIS 132

Query: 125 SVTVAAPGPWAGTYTASKAALHSLTDTLRLELG 157
           SV  +     A  Y  SK A+  LT ++ L+  
Sbjct: 133 SVQASIITKNASAYVTSKHAVIGLTKSIALDYA 165

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  128 bits (324), Expect = 5e-37
 Identities = 44/170 (25%), Positives = 67/170 (39%), Gaps = 13/170 (7%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQD---PRFFVQELDVLSEQSVQNVL 57
           G+G  L R      C+V             +A LE +   P     +LDV S +  +   
Sbjct: 19  GVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAA 78

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             V  +FG + +L NNAGV    P+ E      +     N+ G +  V   VP M  R K
Sbjct: 79  DEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVK 138

Query: 118 ------GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
                 G ++N  S+         G Y  +K A+  L+++L   L  + I
Sbjct: 139 AGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEI 188

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  128 bits (323), Expect = 5e-37
 Identities = 27/164 (16%), Positives = 68/164 (41%), Gaps = 7/164 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDP--RFFVQELDVLSEQSVQNVLS 58
           G+G  +    ++   + V   R     KAT   +      +    + DV     VQN +S
Sbjct: 37  GLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVS 96

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM-AYRKK 117
            +++  G  ++++NNA    + P   +  +A +   +  + G   +   +   +   +K 
Sbjct: 97  ELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKG 156

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
              +++ ++       +     ++KA + +++ +L  E G +G+
Sbjct: 157 AAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGM 200

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  126 bits (320), Expect = 6e-37
 Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 5/153 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           GIG A+  A      +VV+    + +  ++        + +DV +E+ V+  +    +K+
Sbjct: 25  GIGLAVVDALVRYGAKVVSVSLDEKSDVNVSD----HFK-IDVTNEEEVKEAVEKTTKKY 79

Query: 65  GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG 124
           G+ID+LVNNAG++   PL   P     +  + NV G   + +  +P M     G IIN+ 
Sbjct: 80  GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIA 139

Query: 125 SVTVAAPGPWAGTYTASKAALHSLTDTLRLELG 157
           SV   A    A  Y  SK AL  LT ++ ++  
Sbjct: 140 SVQSYAATKNAAAYVTSKHALLGLTRSVAIDYA 172

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  126 bits (319), Expect = 7e-37
 Identities = 45/163 (27%), Positives = 64/163 (39%), Gaps = 7/163 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRS----KATMADLEQDPRFFVQELDVLSEQSVQNVLSN 59
            GIG A+ARA   +   V          +A +A LE         +DV    SV   +  
Sbjct: 22  KGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVE--VDVTKRASVDAAMQK 79

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM-AYRKKG 118
            ++  G  D+L  NAGV  + P  ++     +  F+ N  G     Q    H  A   KG
Sbjct: 80  AIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKG 139

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            I+N  S+      P    Y+ASK A+   T  L  E+    I
Sbjct: 140 VIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNI 182

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  124 bits (314), Expect = 8e-37
 Identities = 28/158 (17%), Positives = 58/158 (36%), Gaps = 20/158 (12%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
           G +G A+          V+  GR    +             +D+ +  S++ +     E+
Sbjct: 13  GTLGSAVKERLEK-KAEVITAGRHSGDVT------------VDITNIDSIKKMY----EQ 55

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
            GK+D +V+  G     PL E+       T ++ + G + LV   +  +    KG     
Sbjct: 56  VGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSL--NDKGSFTLT 113

Query: 124 GSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             + +  P     +   +  A+ +   +  +E+   GI
Sbjct: 114 TGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPR-GI 150

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score =  125 bits (317), Expect = 9e-37
 Identities = 43/182 (23%), Positives = 73/182 (40%), Gaps = 25/182 (13%)

Query: 5   GIGHALARAFAASDC--RVVATGRSKATMADLE--QDPRFFVQELDVLSEQSVQNVLSNV 60
           GIG  L +          ++AT R      +L+  +D R  V  L V  ++S+   +S V
Sbjct: 14  GIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKV 73

Query: 61  LEKFG--KIDVLVNNAGV-QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM----- 112
            E  G   + +L+NNAGV    G   E   + + +  + N    + L Q ++P +     
Sbjct: 74  GEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAAS 133

Query: 113 ------AYRKKGKIINV----GSVTVAAPGPWAGT---YTASKAALHSLTDTLRLELGHF 159
                     +  +I +    GS+T    G        Y  SKAA++    TL ++L   
Sbjct: 134 KESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDD 193

Query: 160 GI 161
            +
Sbjct: 194 NV 195

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  126 bits (318), Expect = 9e-37
 Identities = 29/164 (17%), Positives = 64/164 (39%), Gaps = 8/164 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDP---RFFVQELDVLSEQSVQNVL 57
           G+G A A   A +  R++   R+    +A  + +       +  +   D+     +  + 
Sbjct: 18  GLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLF 77

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
               +  G  D+LV + G    G   E+ +   ++++       + + +     M  +  
Sbjct: 78  EKARD-LGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGW 136

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G+++ +GSVT+  P          +  +  +  TL LEL   G+
Sbjct: 137 GRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGV 180

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  126 bits (318), Expect = 9e-37
 Identities = 47/161 (29%), Positives = 69/161 (42%), Gaps = 6/161 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           G+G   AR   A+  RVV          AT  +L    R+    LDV  E+  Q V++  
Sbjct: 16  GLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQ--HLDVTIEEDWQRVVAYA 73

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
            E+FG +D LVNNAG+     L    +    +    N+ G    ++ V+P M     G I
Sbjct: 74  REEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSI 133

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +N+ S           +Y ASK  +  L+    +ELG   I
Sbjct: 134 VNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRI 174

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  128 bits (323), Expect = 1e-36
 Identities = 37/168 (22%), Positives = 62/168 (36%), Gaps = 14/168 (8%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQEL------------DVLSEQS 52
           GIG A+A   A     +V   ++      L        +E+            DV  EQ 
Sbjct: 56  GIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQ 115

Query: 53  VQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM 112
           +   +   ++KFG ID+LVNNA    +    + P   ++   N N  G     +A +P++
Sbjct: 116 ISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYL 175

Query: 113 AYRKKGKIINVGSVTVAAPGPWAGT--YTASKAALHSLTDTLRLELGH 158
              K   I+N+       P  +     YT +K  +      +  E   
Sbjct: 176 KKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFKG 223

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  125 bits (317), Expect = 1e-36
 Identities = 50/161 (31%), Positives = 70/161 (43%), Gaps = 5/161 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKA--TMADLEQDPR--FFVQELDVLSEQSVQNVLSNV 60
           GIG A+A  FA     +       A    A +    R    V+  DV     V+     V
Sbjct: 18  GIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVK-CDVSQPGDVEAFGKQV 76

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
           +  FG+ D+LVNNAG+  + P  E+     ++TF  NV     + +A VP M     G+I
Sbjct: 77  ISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRI 136

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           IN+ S T          Y ++KAA    T  L  +LG  GI
Sbjct: 137 INLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGI 177

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  126 bits (319), Expect = 1e-36
 Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 6/163 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQD-PRFFVQELDVLSEQSVQNVLSN 59
           GIG A A  FA    R+V +       +  +  L            DV     +  +   
Sbjct: 42  GIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADE 101

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKG 118
                G +DV+ +NAG+   GPLA++         + +++G +  V+A +P +  +   G
Sbjct: 102 AFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGG 161

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            I    S     P    GTY  +K  +  L +TL  E+   GI
Sbjct: 162 HIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGI 204

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  125 bits (317), Expect = 2e-36
 Identities = 55/163 (33%), Positives = 80/163 (49%), Gaps = 8/163 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPR--FFVQELDVLSEQSVQNVLS 58
           GIG A+A  FA +   VV T       +A  A + Q       ++  +V  EQ  + V+ 
Sbjct: 23  GIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLE-CNVTDEQHREAVIK 81

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
             L++FGKI VLVNNAG        ++P+S  E  F  N+F   RL Q   PHM     G
Sbjct: 82  AALDQFGKITVLVNNAGGG-GPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGG 140

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            I+N+ S+          +Y +SKAA++ LT  +  ++G  GI
Sbjct: 141 AILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGI 183

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  126 bits (318), Expect = 2e-36
 Identities = 48/166 (28%), Positives = 70/166 (42%), Gaps = 9/166 (5%)

Query: 5   GIGHALARAFAASDCRVVATGRSK----ATMADLEQDP--RFFVQELDVLSEQSVQNVLS 58
           G+G  +A+A +A    VV TGR      A   ++             DV     V  + +
Sbjct: 44  GVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFA 103

Query: 59  NVLEKFGKIDVLVNNAGVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM--AYR 115
            V  +F ++D+LVNNAG      PL EV           N+ G     Q     M     
Sbjct: 104 AVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTP 163

Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           + G+IIN GS++   P P +  YTA+K A+  LT +  L+     I
Sbjct: 164 RGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRMHDI 209

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  125 bits (317), Expect = 2e-36
 Identities = 26/154 (16%), Positives = 52/154 (33%), Gaps = 3/154 (1%)

Query: 5   GIGHALARAFAASDCRVVATGR-SKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
            +G   A        RV+ + R   A++ +L Q     +   D   E  +   +  +  +
Sbjct: 38  RVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALY-GDFSCETGIMAFIDLLKTQ 96

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
              +  +V+NA         E       + F+ ++  P  +     P +   +   I+++
Sbjct: 97  TSSLRAVVHNASEWLAETPGEEA-DNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHI 155

Query: 124 GSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG 157
                         Y A+KA L SLT +      
Sbjct: 156 SDDVTRKGSSKHIAYCATKAGLESLTLSFAARFA 189

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  125 bits (316), Expect = 2e-36
 Identities = 34/169 (20%), Positives = 58/169 (34%), Gaps = 18/169 (10%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQEL------------DVLSEQS 52
            +G   A+ FA     +V             +       EL            D+ +E+ 
Sbjct: 22  NLGALTAKTFALESVNLVLHYHQAKDSDTANK----LKDELEDQGAKVALYQSDLSNEEE 77

Query: 53  VQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM 112
           V  +     ++FGK+D+ +N  G     P+ E   +  +     N       ++    HM
Sbjct: 78  VAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHM 137

Query: 113 AYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
                G II + +  +AA   +  TY  +KA +   T     EL    I
Sbjct: 138 --NPNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQI 184

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  125 bits (316), Expect = 2e-36
 Identities = 38/163 (23%), Positives = 60/163 (36%), Gaps = 6/163 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVLSN 59
           GIGHA+   FA     +    R++  + +          +      D       + ++  
Sbjct: 25  GIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQT 84

Query: 60  VLEKFG-KIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
           V   FG K+D+L+NN G     P  +          +TN+     L Q   P +     G
Sbjct: 85  VSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCG 144

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            II + S+           Y+A+K AL+ L   L  E    GI
Sbjct: 145 NIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGI 187

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  124 bits (314), Expect = 2e-36
 Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 5   GIGHALARAFAA-------SDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQS 52
           GIG A+A  FA         +  +V + R+ A +  +  +             D+     
Sbjct: 13  GIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMAD 72

Query: 53  VQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM 112
           V+ + ++++E++G ID LVNNAGV   G L+++     + T NTN+ G   L QA+   M
Sbjct: 73  VRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALM 132

Query: 113 AYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             +  G I  + SV        +  Y  SK     L +T+RL      +
Sbjct: 133 ERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNV 181

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  125 bits (316), Expect = 2e-36
 Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 9/165 (5%)

Query: 5   GIGHALARAFAASDCRVVATGRS-----KATMADLEQDPR--FFVQELDVLSEQSVQNVL 57
           G+G ++A  FA    +VV   RS      + + ++++       V+  DV  E  V N++
Sbjct: 18  GLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK-GDVTVESDVINLV 76

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM-AYRK 116
            + +++FGK+DV++NNAG++      E+ LS   +  +TN+ G     +  + +      
Sbjct: 77  QSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDI 136

Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           KG +IN+ SV    P P    Y ASK  +  +T+TL LE    GI
Sbjct: 137 KGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGI 181

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  124 bits (314), Expect = 3e-36
 Identities = 54/167 (32%), Positives = 77/167 (46%), Gaps = 11/167 (6%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPR-------FFVQELDVLSEQSVQNVL 57
           G G A+A  F A   RV A   S  T+ +  +            V+  DV  E  V   +
Sbjct: 13  GNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVR-ADVADEGDVNAAI 71

Query: 58  SNVLEKFGKIDVLVNNAGV---QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY 114
           +  +E+FG IDVLVNNAG+      G L   P+   ++    NV G     +AV+PHM  
Sbjct: 72  AATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLL 131

Query: 115 RKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +  G I+N+ SV      P    YT SK A+  LT ++ ++    GI
Sbjct: 132 QGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGI 178

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  124 bits (315), Expect = 4e-36
 Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 9/165 (5%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           GIG   A+ F     +VV    +    +    ++           DV  ++ V+N++   
Sbjct: 27  GIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTT 86

Query: 61  LEKFGKIDVLVNNAGVQCV--GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
           + K GK+D++  N GV       + E      ++  + NV+G   + +     M   KKG
Sbjct: 87  IAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKG 146

Query: 119 KIINVGSVT--VAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            I+   S++   A  G  +  YTA+K A+  LT +L  ELG +GI
Sbjct: 147 SIVFTASISSFTAGEGV-SHVYTATKHAVLGLTTSLCTELGEYGI 190

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  124 bits (315), Expect = 4e-36
 Identities = 40/166 (24%), Positives = 63/166 (37%), Gaps = 9/166 (5%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVLS 58
           GGIG A+A A+A +   V     S       E             + ++   +SV+  +S
Sbjct: 44  GGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETIS 103

Query: 59  NVLEKFGKIDVLVNNAGVQCV-GPLAEV-PLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
              + FG IDV V NAGV    GP  +V    +  +  + ++ G       +        
Sbjct: 104 QQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG 163

Query: 117 KGKIINVGSV--TVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG 160
           KG +I   S+   +         Y  +KAA   L  +L +E   F 
Sbjct: 164 KGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPFA 209

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  124 bits (314), Expect = 4e-36
 Identities = 44/167 (26%), Positives = 69/167 (41%), Gaps = 7/167 (4%)

Query: 2   SQGGIGHALARAFAASDCRVVATGRS-----KATMADLEQD--PRFFVQELDVLSEQSVQ 54
           S  GIG  +A A AA    +V  G       +   A L      +      D+   ++V+
Sbjct: 12  STSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVR 71

Query: 55  NVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY 114
            ++ N + + G+ID+LVNNAG+Q    + + P    +     N+        A +PHM  
Sbjct: 72  GLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKK 131

Query: 115 RKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +  G+IIN+ S            Y A+K  +   T    LE    GI
Sbjct: 132 QGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGI 178

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  125 bits (315), Expect = 5e-36
 Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 14/168 (8%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPR--FFVQELDVLSEQSVQNVLS 58
           GIG A A A AA    V A GR+    +    ++         ++  DV  E  ++N + 
Sbjct: 39  GIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALE-ADVSDELQMRNAVR 97

Query: 59  NVLEKFGKIDVLVNNAGVQCV-GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
           +++ KFG +D++V NAG+  V  P+ ++     ++T   N+ G    +   VP++  R  
Sbjct: 98  DLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGG 157

Query: 118 GKIINVGSV----TVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G I+ V S+    T   PG  A  YTA+KAA  ++   L LELG   I
Sbjct: 158 GAIVVVSSINGTRTFTTPG--ATAYTATKAAQVAIVQQLALELGKHHI 203

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  124 bits (313), Expect = 5e-36
 Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 6/164 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRS----KATMADLEQDP-RFFVQELDVLSEQSVQNVLS 58
            GIG A+AR   +   RVV T R     +A   ++            D+    ++    +
Sbjct: 39  RGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFAT 98

Query: 59  NVLEKFGKIDVLVNNAGV-QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
            VL   G+ DVLVNNAGV    GPL  +  +  +     N+  P  L++A  P M   K+
Sbjct: 99  GVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKR 158

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G IIN+ S+    P      YTASK  L+ L  +   EL    +
Sbjct: 159 GHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQV 202

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  124 bits (313), Expect = 6e-36
 Identities = 51/166 (30%), Positives = 78/166 (46%), Gaps = 12/166 (7%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPR------FFVQELDVLSEQSVQNVLS 58
           GIG A+A+ FA +D  VVA    +  +  + Q+ R        V+  DV  ++ V+  + 
Sbjct: 18  GIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVK-ADVSKKKDVEEFVR 76

Query: 59  NVLEKFGKIDVLVNNAGVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
              E + +IDVL NNAG+   V P+AEV     E+    N++      +AV+P M  + K
Sbjct: 77  RTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGK 136

Query: 118 GKIINVGSV--TVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G I+N  S+             YT +K  L  LT ++    G  GI
Sbjct: 137 GVIVNTASIAGIRGGFA--GAPYTVAKHGLIGLTRSIAAHYGDQGI 180

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  123 bits (312), Expect = 6e-36
 Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 10/167 (5%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD--------PRFFVQELDVLSEQSVQNV 56
           GIG A ARA+AA    VV  GR++A++A++           P      L+  + Q  + +
Sbjct: 25  GIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYREL 84

Query: 57  LSNVLEKFGKIDVLVNNAGV-QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
            + V  +FG++D L++NA +     PL ++P     Q  + NV     L +A++P +   
Sbjct: 85  AARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRS 144

Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL-GHFGI 161
           +   I    S          G Y  SK A   L  TL  EL G   +
Sbjct: 145 EDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELEGVTAV 191

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  123 bits (311), Expect = 9e-36
 Identities = 42/160 (26%), Positives = 65/160 (40%), Gaps = 7/160 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           G+G  + +       +V  +  +    +   A+L +   F     DV SE     V++ V
Sbjct: 17  GVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFV--RHDVSSEADWTLVMAAV 74

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
             + G ++VLVNNAG+   G +    L    +    N        Q  +  M     G I
Sbjct: 75  QRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMK-ETGGSI 133

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG 160
           IN+ SV+   P      Y+ASKAA+ +LT    L     G
Sbjct: 134 INMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQG 173

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  123 bits (310), Expect = 1e-35
 Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 19/170 (11%)

Query: 5   GIGHALARAFA---ASDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQ 54
           G G ALA   A   +    ++ + RS++ +  L++       D +  +   D+ +E  VQ
Sbjct: 17  GFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQ 76

Query: 55  NVLSNVLEKFG----KIDVLVNNAGV---QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQA 107
            +LS V E       +  +L+NNA        G L    L+ +   +  N+   + L   
Sbjct: 77  RLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSG 136

Query: 108 VVPHMAYRK--KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
            +            ++N+ S+    P    G Y A KAA   L   L  E
Sbjct: 137 TLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE 186

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  123 bits (312), Expect = 1e-35
 Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 11/166 (6%)

Query: 5   GIGHALARAFAASDCRVVATGRS-----KATMADLEQDP--RFFVQELDVLSEQSVQNVL 57
           GIG A+AR  A +   +V  G       +    ++             D+     + +++
Sbjct: 36  GIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMM 95

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
           + V ++FG  D+LVNNAGVQ V  + + P+   ++    N+      ++  +P M  +  
Sbjct: 96  AMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGW 155

Query: 118 GKIINVGSV--TVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G+IIN+ S    VA+P   A  Y A+K  +  LT T+ LE+   G+
Sbjct: 156 GRIINIASAHGLVASPFKSA--YVAAKHGIMGLTKTVALEVAESGV 199

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  123 bits (311), Expect = 1e-35
 Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 8/164 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRS----KATMADLEQDPRFFVQELDVLSEQSVQNVLSN 59
           GGIG   +R  A +  RVV             A + +        +D+ +E SV+ ++  
Sbjct: 21  GGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHH--VVDLTNEVSVRALIDF 78

Query: 60  VLEKFGKIDVLVNNAGVQCVG--PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
            ++ FG++D++ NNA         + ++ +   + TF  N  G M + +  +P +     
Sbjct: 79  TIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGG 138

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G I+N+ S T  A    +  Y  +KAA+ +LT  +  + G  G+
Sbjct: 139 GAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGV 182

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  123 bits (310), Expect = 1e-35
 Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 8/165 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRS----KATMADLEQDPR--FFVQELDVLSEQSVQNVL 57
           G IG A A   A     +     +    +   A + +           DV SE++V   +
Sbjct: 17  GNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYV-CDVTSEEAVIGTV 75

Query: 58  SNVLEKFGKIDVLVNNAGVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
            +V+  FGKID L NNAG Q    P+ + P     +    NV G   +++AV   M  + 
Sbjct: 76  DSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN 135

Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            G+I+N  S+      P    Y  SK A+ +LT+T  L+L  + I
Sbjct: 136 YGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNI 180

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  124 bits (313), Expect = 1e-35
 Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 11/167 (6%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPRF------FVQELDVLSEQSVQ 54
           GIG A+ +        VV   R     K+   +L+ +            + ++ +E+ V 
Sbjct: 29  GIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVN 88

Query: 55  NVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY 114
           N++ + L+ FGKI+ LVNN G Q + P   +          TN+ G   + +AV      
Sbjct: 89  NLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMK 148

Query: 115 RKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
              G I+N+  V   A  P A    A++A +++LT +L LE    GI
Sbjct: 149 EHGGSIVNI-IVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGI 194

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  122 bits (308), Expect = 2e-35
 Identities = 26/158 (16%), Positives = 53/158 (33%), Gaps = 6/158 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
           G +G A+   F  +   V+    S    AD            +   ++      +    +
Sbjct: 13  GALGSAILEFFKKNGYTVLNIDLSANDQADSN---ILVDGNKNWTEQEQSILEQTASSLQ 69

Query: 64  FGKIDVLVNNAGVQCVGP-LAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIIN 122
             ++D +   AG    G   ++  +   +     +V+      +    H+  +  G +  
Sbjct: 70  GSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHL--KPGGLLQL 127

Query: 123 VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG 160
            G+     P P    Y  +KAA+H LT +L  +     
Sbjct: 128 TGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLP 165

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  123 bits (310), Expect = 2e-35
 Identities = 49/166 (29%), Positives = 72/166 (43%), Gaps = 10/166 (6%)

Query: 5   GIGHALARAFAASDCRVVAT------GRSKATMADLEQDPR--FFVQELDVLSEQSVQNV 56
           GIG  ++   AA    +          ++  T+  +E   +   FV  LDV  + +  + 
Sbjct: 13  GIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVG-LDVTDKANFDSA 71

Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM-AYR 115
           +    EK G  DVLVNNAG+  + PL EV    ++Q ++ NVF     +QA         
Sbjct: 72  IDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELG 131

Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            KGKIIN  S+      P    Y+ +K A+  LT     EL   G 
Sbjct: 132 VKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGH 177

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  123 bits (310), Expect = 2e-35
 Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 8/166 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRS----KATMADLEQ---DPRFFVQELDVLSEQSVQNV 56
            G+G A A   AA   ++     S    +A+ A + +   D        DV  E  V+  
Sbjct: 23  SGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAY 82

Query: 57  LSNVLEKFGKIDVLVNNAGVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
           ++   E+FG+ID   NNAG++    P      +  ++  + N+ G    ++ V+  M  +
Sbjct: 83  VTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ 142

Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             G ++N  SV           Y A+K  +  LT    +E G +GI
Sbjct: 143 GSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGI 188

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  122 bits (309), Expect = 2e-35
 Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 7/163 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKA--TMADLEQD-PRFFVQELDVLSEQSVQNVLSNV 60
            GIG  +A+  A +   +V  G       +A++ +   +      D+     ++ + +  
Sbjct: 14  SGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALA 73

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
             +FG +D+LVNNAG+Q V P+ + PL + ++    N+       +  +P M  R  G+I
Sbjct: 74  EREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRI 133

Query: 121 INVGSV--TVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           IN+ SV   V + G  A  Y A+K  +  LT  + LE     +
Sbjct: 134 INIASVHGLVGSTGKAA--YVAAKHGVVGLTKVVGLETATSNV 174

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  122 bits (309), Expect = 2e-35
 Identities = 37/158 (23%), Positives = 62/158 (39%), Gaps = 5/158 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           GIG A+A  F     +V+ TGR     +     +    +    + D   E     +    
Sbjct: 17  GIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDAT 76

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG-K 119
            + FG +  LVNNAG+     + E   +   +    N+ G     +  +  M  +  G  
Sbjct: 77  EKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGAS 136

Query: 120 IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG 157
           IIN+ S+      P  G Y ASK A+  ++ +  L+  
Sbjct: 137 IINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCA 174

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  123 bits (310), Expect = 2e-35
 Identities = 36/163 (22%), Positives = 64/163 (39%), Gaps = 6/163 (3%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDP--RFFVQELDVLSEQSVQNVLS 58
           GIG  +A  F    C  V   RS          L      R     +DV +  +V   + 
Sbjct: 38  GIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVD 97

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
             L++FG+ID+L+N A    + P   +  +A +   + +  G   + + +         G
Sbjct: 98  QALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGG 157

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            I+N+ +              ++KAA+ ++T  L +E G   I
Sbjct: 158 VIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNI 200

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  122 bits (309), Expect = 2e-35
 Identities = 44/166 (26%), Positives = 65/166 (39%), Gaps = 11/166 (6%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           G G  +A+ FA    +VV   R     +    ++           D+  E  V   +   
Sbjct: 20  GFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAV--AADISKEADVDAAVEAA 77

Query: 61  LEKFGKIDVLVNNAGV-QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG- 118
           L KFGK+D+LVNNAG+         V     ++    NV G   +   ++PH        
Sbjct: 78  LSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKG 137

Query: 119 ---KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
               I+NV S     P P    Y A+K  + S+T  L +EL    I
Sbjct: 138 QECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKI 183

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  122 bits (309), Expect = 2e-35
 Identities = 47/164 (28%), Positives = 69/164 (42%), Gaps = 8/164 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPR--FFVQELDVLSEQSVQNVLS 58
           GIG A+A         V     +    KA  +++ Q       V+ +DV     V   + 
Sbjct: 13  GIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVK-VDVSDRDQVFAAVE 71

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM-AYRKK 117
              +  G  DV+VNNAGV    P+  +    +++ +N NV G +  +QA V         
Sbjct: 72  QARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHG 131

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           GKIIN  S       P    Y++SK A+  LT T   +L   GI
Sbjct: 132 GKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGI 175

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  122 bits (307), Expect = 3e-35
 Identities = 23/156 (14%), Positives = 49/156 (31%), Gaps = 6/156 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
           G +G    +AF A +  V +    +   A      +          +          L  
Sbjct: 17  GALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTD---SFTEQADQVTAEVGKLLG 73

Query: 64  FGKIDVLVNNAGVQCVG-PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIIN 122
             K+D ++  AG    G   ++      +  +  +++           H+  ++ G +  
Sbjct: 74  DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHL--KEGGLLTL 131

Query: 123 VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH 158
            G+       P    Y  +K A+H L  +L  +   
Sbjct: 132 AGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSG 167

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  123 bits (310), Expect = 3e-35
 Identities = 44/160 (27%), Positives = 65/160 (40%), Gaps = 8/160 (5%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLE 62
           G+G AL   F A   RV    +S   + +LE            DV S Q  +      L 
Sbjct: 16  GLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLA 75

Query: 63  KFGKIDVLVNNAGVQCVGPL-----AEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
            FGKID L+ NAG+            +   +A +  F+ NV G +  V+A +P +    +
Sbjct: 76  AFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALV-SSR 134

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG 157
           G ++   S     P      YTA+K A+  L   +  EL 
Sbjct: 135 GSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELA 174

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  122 bits (308), Expect = 4e-35
 Identities = 45/167 (26%), Positives = 68/167 (40%), Gaps = 13/167 (7%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPR--FFVQELDVLSEQSVQNVLS 58
           GIG A A  FA    +VV T R+         ++         +   DV  E   + ++ 
Sbjct: 19  GIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALA-GDVGDEALHEALVE 77

Query: 59  NVLEKFGKIDVLVNNAGVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             + +FG +D   NNAG    +G ++ + +    +T +TN+       +  VP +A    
Sbjct: 78  LAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGG 137

Query: 118 GKIINVGSV---TVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G +    S    T    G     Y ASKA L  L   L +ELG  GI
Sbjct: 138 GSLTFTSSFVGHTAGFAG--VAPYAASKAGLIGLVQALAVELGARGI 182

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  121 bits (307), Expect = 6e-35
 Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 11/165 (6%)

Query: 5   GIGHALARAFAASDCRVVATGRS-----KATMADLEQDPR--FFVQELDVLSEQSVQNVL 57
           GIG A+A+  A     V  T  +     +A ++++EQ       ++  D    ++++  +
Sbjct: 42  GIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIR-ADNRDAEAIEQAI 100

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
              +E  G +D+LVN+AG+    PL E  ++  ++    N   P   +++   H+     
Sbjct: 101 RETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHL--GDG 158

Query: 118 GKIINVGSVTVA-APGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G+II +GS      P P    Y+ASKAAL  LT  L  +LG  GI
Sbjct: 159 GRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGI 203

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  121 bits (306), Expect = 6e-35
 Identities = 35/163 (21%), Positives = 66/163 (40%), Gaps = 9/163 (5%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQD--------PRFFVQELDVLSEQSVQNV 56
           GIG   A  +A     V+  GR++  +  +           P++F+ +L   + ++ Q +
Sbjct: 23  GIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQL 82

Query: 57  LSNVLEKFGKIDVLVNNAGV-QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
              +   + ++D +++NAG+   V P++E      +     NV     L QA++P +   
Sbjct: 83  AQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKS 142

Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH 158
             G ++   S          G Y ASK A   +   L  E   
Sbjct: 143 DAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQ 185

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  121 bits (306), Expect = 7e-35
 Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 17/172 (9%)

Query: 5   GIGHALARAFAASDCRVVATGRS-----KATMADLEQDPR--FFVQELDVLSEQSVQNVL 57
           GIG A AR FA +  +V   GR        T+A +  D     F    D+ + ++ Q ++
Sbjct: 18  GIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFA-ADLATSEACQQLV 76

Query: 58  SNVLEKFGKIDVLVNNAGVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM---- 112
              + KFG IDVL+NNAG      PL E+  +  +   + N+   +   +  +PH+    
Sbjct: 77  DEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAA 136

Query: 113 -AYRKKGKIINVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
            A  +   +I+ GS+     G   G   Y A+KA LH++           G+
Sbjct: 137 KASGQTSAVISTGSI-AGHTGGGPGAGLYGAAKAFLHNVHKNWVDFHTKDGV 187

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  121 bits (306), Expect = 7e-35
 Identities = 43/163 (26%), Positives = 67/163 (41%), Gaps = 14/163 (8%)

Query: 5   GIGHALARAFAASDCRVVATGRS-----KATMADLEQDPR--FFVQELDVLSEQSVQNVL 57
            IG A A  FA     VV T           +A++E+  R    ++  D+ +   V+  +
Sbjct: 19  DIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIK-ADLTNAAEVEAAI 77

Query: 58  SNVLEKFGKIDVLVNNAGVQCV-GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
           S   +KFG+I  LV+ AG       +AE+  +   Q  + N+       +  +P M   K
Sbjct: 78  SAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKM--AK 135

Query: 117 KGKIINVGSVTVAAPGPWAGT--YTASKAALHSLTDTLRLELG 157
            G I+   S      G   G   Y  SK A+ + T  L  E+G
Sbjct: 136 GGAIVTFSSQ-AGRDGGGPGALAYATSKGAVMTFTRGLAKEVG 177

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  121 bits (305), Expect = 1e-34
 Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 8/163 (4%)

Query: 5   GIGHALARAFAASDCRVV---ATGRSKA--TMADLEQD-PRFFVQELDVLSEQSVQNVLS 58
           GIG A+A   A+    VV   A   + A      +E    +    + DV    +V+ + +
Sbjct: 38  GIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFA 97

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
              E FG +DVLVNNAG+  +  +AE   +  ++    N+ G    ++     +  R  G
Sbjct: 98  TAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRL--RVGG 155

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +IIN+ +  V    P  G Y A+KA + ++T  L  EL    I
Sbjct: 156 RIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELRGRDI 198

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  120 bits (304), Expect = 1e-34
 Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 11/167 (6%)

Query: 2   SQGGIGHALARAFAASDCRVVATGRSK----ATMADLEQ---DPRFFVQELDVLSEQSVQ 54
           S  GIG A+A +  A    V+  GR +     T+ ++     D        D+ +EQ  Q
Sbjct: 18  STAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQ 77

Query: 55  NVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY 114
           +V+    EK+ K+D+L+NN G+       ++P     + F  N+   +RL ++ +  M  
Sbjct: 78  DVI----EKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIE 133

Query: 115 RKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           RK+G++I + S     P      Y+A+K    SL+ +L        +
Sbjct: 134 RKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNV 180

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  119 bits (301), Expect = 3e-34
 Identities = 35/158 (22%), Positives = 67/158 (42%), Gaps = 10/158 (6%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
            GIG A+A   +     V    R++  +               V     ++  L  + EK
Sbjct: 29  RGIGRAVADVLSQEGAEVTICARNEELLKRS-------GHRYVVCD---LRKDLDLLFEK 78

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
             ++D+LV NAG    G   E+     ++  ++     +++V+  +P M  +  G+I+ +
Sbjct: 79  VKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAI 138

Query: 124 GSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            S +V +P     T  +++ AL     TL  E+  +GI
Sbjct: 139 TSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGI 176

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  119 bits (301), Expect = 4e-34
 Identities = 46/171 (26%), Positives = 68/171 (39%), Gaps = 14/171 (8%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADL------EQDPRFFVQELDVLSEQSVQNVLS 58
           GIG A  RA AA+   V    RS A   ++      E   +    + DV +   V   + 
Sbjct: 25  GIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQ 84

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK- 117
            +    G I  L+ NAGV  V P  E+        ++ NVFG     +AV      +++ 
Sbjct: 85  QIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQK 144

Query: 118 GKIINVGSV--TVAAPGPWAGT-----YTASKAALHSLTDTLRLELGHFGI 161
           G I+   S+   +       G+     Y +SKAA  +L   L  E    GI
Sbjct: 145 GSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGI 195

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  119 bits (300), Expect = 4e-34
 Identities = 37/168 (22%), Positives = 63/168 (37%), Gaps = 18/168 (10%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQ------DPRFFVQELDV-LSEQSVQNV 56
           GGIG   +R     + +             L +               DV +     + +
Sbjct: 15  GGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKL 74

Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
           L  + ++   +D+L+N AG+        +    +E+T   N  G +    A++     RK
Sbjct: 75  LKKIFDQLKTVDILINGAGI--------LDDHQIERTIAINFTGLVNTTTAILDFWDKRK 126

Query: 117 KGK---IINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            G    I N+ SVT          Y+ASKAA+ S T++L       G+
Sbjct: 127 GGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGV 174

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  119 bits (302), Expect = 5e-34
 Identities = 43/166 (25%), Positives = 69/166 (41%), Gaps = 12/166 (7%)

Query: 5   GIGHALARAFAASDCRVVATGRS------KATMADLEQDPR--FFVQELDVLSEQSVQNV 56
           GIG A A A+A     V            +   A +E+  R    +   D+  E   +++
Sbjct: 60  GIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLP-GDLSDESFARSL 118

Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGP-LAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
           +    E  G +D+L   AG Q   P + ++     +QTF  NVF    + Q  +P +   
Sbjct: 119 VHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLL--P 176

Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           K   II   S+    P P    Y A+KAA+ + +  L  ++   GI
Sbjct: 177 KGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGI 222

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  118 bits (299), Expect = 6e-34
 Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 7/164 (4%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDP-RFFVQELDVLSEQSVQNVLSN 59
           G+G  +A  FA    RVV TGR+    +    ++EQ P +    ++DV +   +Q ++  
Sbjct: 17  GMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQ 76

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM-AYRKKG 118
           + EKFG+ID+L+NNA    + P  ++ ++      N  + G     QA+  +      KG
Sbjct: 77  IDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKG 136

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH-FGI 161
            IIN+ +      GP      A+KA + ++T TL +E G  +GI
Sbjct: 137 NIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGI 180

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  118 bits (297), Expect = 1e-33
 Identities = 36/166 (21%), Positives = 63/166 (37%), Gaps = 11/166 (6%)

Query: 5   GIGHALARAFAASDCRVVATGRS-----KATMADLEQD--PRFFVQELDVLSEQSVQNVL 57
           G+G   AR  A     V  T  S     +  + +LE+    +    +  V S +S + ++
Sbjct: 33  GMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLV 92

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
            +V+  FG+ID  + NAG      + +  + A       ++ G     +AV  H   R  
Sbjct: 93  KDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGT 152

Query: 118 GKIINVGSV---TVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG 160
           G ++   S+       P      Y  +KA    +  +L  E   F 
Sbjct: 153 GSLVITASMSGHIANFPQEQTS-YNVAKAGCIHMARSLANEWRDFA 197

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  117 bits (296), Expect = 2e-33
 Identities = 46/166 (27%), Positives = 67/166 (40%), Gaps = 13/166 (7%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPR--FFVQELDVLSEQSVQNVLS 58
           GIG A A A A     VV    +    +A    +  D      V  +DV   +S + +  
Sbjct: 20  GIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVA-VDVSDPESAKAMAD 78

Query: 59  NVLEKFGKIDVLVNNAGVQCV---GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
             L +FG ID LVNNA +        L  +     ++  + N+ G +   +AV   M  R
Sbjct: 79  RTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKR 138

Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             G I+N  S   A     +  Y  +K  ++ LT  L  ELG   I
Sbjct: 139 GGGAIVNQSST-AAWLY--SNYYGLAKVGINGLTQQLSRELGGRNI 181

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  117 bits (296), Expect = 2e-33
 Identities = 35/165 (21%), Positives = 66/165 (40%), Gaps = 11/165 (6%)

Query: 5   GIGHALARAFAASDCRVV---ATGRSKA--TMADLEQDPR--FFVQELDVLSEQSVQNVL 57
           GIG A+A        +VV   A     A   +++++        ++  D+     +  + 
Sbjct: 29  GIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIK-ADIRQVPEIVKLF 87

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
              +  FG +D+ V+N+GV   G L +V     ++ F+ N  G   + +    H+   + 
Sbjct: 88  DQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHL--TEG 145

Query: 118 GKIINVGS-VTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G+I+   S  +     P    Y+ SK A+ S       + G   I
Sbjct: 146 GRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKI 190

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  117 bits (296), Expect = 2e-33
 Identities = 37/164 (22%), Positives = 64/164 (39%), Gaps = 9/164 (5%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADL------EQDPRFFVQELDVLSEQSVQNVLS 58
           GIG  +A         VV    S +  A+       +   +    + D+     V  +  
Sbjct: 32  GIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFD 91

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
             +  FG +D +++N+G++      EV     ++ FN N  G   + Q  + H   R+ G
Sbjct: 92  KAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHC--RRGG 149

Query: 119 KIINVGSVTVAAPG-PWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +II   S+     G P    Y  SKAA+        ++ G  G+
Sbjct: 150 RIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGV 193

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  118 bits (297), Expect = 2e-33
 Identities = 35/165 (21%), Positives = 72/165 (43%), Gaps = 11/165 (6%)

Query: 5   GIGHALARAFAASDCRVV---ATGRSKA--TMADLEQDPR--FFVQELDVLSEQSVQNVL 57
           GIG  +A       C+V+   A     A   +A ++++      V+  +V   + +  + 
Sbjct: 40  GIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVK-ANVGVVEDIVRMF 98

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
              ++ FGK+D++ +N+GV   G + +V     ++ F  N  G   + +    H+     
Sbjct: 99  EEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL--EIG 156

Query: 118 GKIINVGS-VTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G++I +GS    A   P    Y+ SK A+ +    + +++    I
Sbjct: 157 GRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKI 201

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  116 bits (294), Expect = 4e-33
 Identities = 44/167 (26%), Positives = 70/167 (41%), Gaps = 7/167 (4%)

Query: 2   SQGGIGHALARAFAASDCRVVATGRS----KATMADLEQD--PRFFVQELDVLSEQSVQN 55
           +  GIG   AR        VV +         T   L      R      DV S ++V  
Sbjct: 31  AGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDA 90

Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM-AY 114
           +++  +EK G++DVLVNNAG+    P+ ++     ++  N  +   MR  +A + +    
Sbjct: 91  LITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGV 150

Query: 115 RKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
              G I+N  SV           Y A+KA + +LT    +E   FG+
Sbjct: 151 DHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGV 197

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  116 bits (293), Expect = 8e-33
 Identities = 42/176 (23%), Positives = 65/176 (36%), Gaps = 19/176 (10%)

Query: 5   GIGHALARAFAASDCRVVAT----------GRSKATMADLEQ--------DPRFFVQELD 46
           G G A A   AA    ++A               A+  DL +        + R     +D
Sbjct: 22  GQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVD 81

Query: 47  VLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQ 106
                 ++ V+ + +   G++D++V NAGV       ++         + NV G    V 
Sbjct: 82  TRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVM 141

Query: 107 AVVPHM-AYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           A  P +    + G II + S       P+   YTASK A+  L      ELG   I
Sbjct: 142 AGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSI 197

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  114 bits (289), Expect = 2e-32
 Identities = 49/169 (28%), Positives = 68/169 (40%), Gaps = 15/169 (8%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD------PRFFVQELDVLSEQSVQNVL 57
            GIG  +A  FA +   V   GRS A +     D       +    + DV        + 
Sbjct: 20  KGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALA 79

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
              +E+FG IDV+  NAGV    PLA +    +   F  NV G    VQA +  +     
Sbjct: 80  GRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGS 139

Query: 118 GKIINVGSVTVAAPGPWAGT-----YTASKAALHSLTDTLRLELGHFGI 161
           G+++   S+T    GP  G      Y A+KAA      T  +EL    I
Sbjct: 140 GRVVLTSSIT----GPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKI 184

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  115 bits (290), Expect = 3e-32
 Identities = 51/168 (30%), Positives = 71/168 (42%), Gaps = 11/168 (6%)

Query: 5   GIGHALARAFAASDCRVVATGRS-----KATMADLEQD-PRFFVQELDVLSEQSVQNVLS 58
           GIG  +ARA AAS   +  TG          +A+L     R      D+    S Q  + 
Sbjct: 40  GIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVD 99

Query: 59  NVLEKFGKIDVLVNNAGV--QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM---A 113
            V+ +FG+ID LVNNAG+         ++     +     N+ G +   QAV+  M    
Sbjct: 100 AVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASD 159

Query: 114 YRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            R    IIN+ SV+     P    Y  SKA L + +  L L L   GI
Sbjct: 160 ARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRLAETGI 207

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  114 bits (289), Expect = 4e-32
 Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 9/164 (5%)

Query: 5   GIGHALARAFAASDCRVVATGRS-----KATMADLEQDPR-FFVQELDVLSEQSVQNVLS 58
           GIG A++ AFA     +             T   +E++     +   D+  EQ  ++++ 
Sbjct: 58  GIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQ 117

Query: 59  NVLEKFGKIDVLVNNAGVQCVGP-LAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             + + G +++LVNN   Q     L  +    +E+TF  N+F    + +A + H+  ++ 
Sbjct: 118 ETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHL--KQG 175

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             IIN  S+           Y+A+K A+ + T +L   L   GI
Sbjct: 176 DVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGI 219

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  114 bits (287), Expect = 5e-32
 Identities = 42/184 (22%), Positives = 67/184 (36%), Gaps = 27/184 (14%)

Query: 5   GIGHALARAFAASDCRVVATGRS-----KATMADLEQDP--RFFVQELDVLSEQSV---- 53
            IGH++A        RVV   R      +  +A+L         + + D+    S+    
Sbjct: 22  RIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCC 81

Query: 54  QNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAM-----------EQTFNTNVFGPM 102
           ++++      FG+ DVLVNNA      PL     +              + F +N   P+
Sbjct: 82  EDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPL 141

Query: 103 RLVQAVVPHMAY-----RKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG 157
            L++A             +   ++N+       P P    YT +K AL  LT    LEL 
Sbjct: 142 FLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELA 201

Query: 158 HFGI 161
              I
Sbjct: 202 PRHI 205

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  113 bits (286), Expect = 7e-32
 Identities = 46/169 (27%), Positives = 70/169 (41%), Gaps = 13/169 (7%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMAD-----LEQDPR--FFVQELDVLSEQSVQNVL 57
           GIG A+ R  A    RV     +    AD     + +       +   DV +   +  + 
Sbjct: 37  GIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIP-GDVGNAADIAAMF 95

Query: 58  SNVLEKFGKIDVLVNNAGV-QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
           S V  +FG++D LVNNAG+      + E+ +  +E+    NV G +      V  M+   
Sbjct: 96  SAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLY 155

Query: 117 K---GKIINVGSVTVAAPGP-WAGTYTASKAALHSLTDTLRLELGHFGI 161
               G I+NV S+            Y ASKAA+ + T  L  E+   GI
Sbjct: 156 SGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLAREVAAEGI 204

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  113 bits (284), Expect = 1e-31
 Identities = 41/160 (25%), Positives = 66/160 (41%), Gaps = 5/160 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADL--EQDPRFFVQELDVLSEQSVQNVLSNVL 61
            GIG A    FA     +VA  R +  +A+     +        DV   ++V+ V +  L
Sbjct: 16  SGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEAL 75

Query: 62  EKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
           E+FG++  + + AGV        +PL A E+    N+ G   + +     +   + G ++
Sbjct: 76  EEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL--EEGGSLV 133

Query: 122 NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             GSV           Y A K  +  L  TL LEL   G+
Sbjct: 134 LTGSV-AGLGAFGLAHYAAGKLGVVGLARTLALELARKGV 172

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  112 bits (283), Expect = 3e-31
 Identities = 45/169 (26%), Positives = 70/169 (41%), Gaps = 15/169 (8%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD------PRFFVQELDVLSEQSVQNVL 57
            GIG  +A  FA +   V    RS   ++ +  +             LDV    S  +  
Sbjct: 51  KGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAA 110

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             V++ FG +DV+  NAG+     L  +    + +  + NV G +  VQA +  +    +
Sbjct: 111 RTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGR 170

Query: 118 GKIINVGSVTVAAPGPWAGT-----YTASKAALHSLTDTLRLELGHFGI 161
           G++I   S+T    GP  G      Y ASKAA      T  +EL   G+
Sbjct: 171 GRVILTSSIT----GPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGV 215

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  111 bits (281), Expect = 5e-31
 Identities = 49/166 (29%), Positives = 72/166 (43%), Gaps = 9/166 (5%)

Query: 4   GGIGHALARAFAASDCRVVATGRS----KATMADLEQD-PRFFVQELDVLSEQSVQNVLS 58
            GIG A+AR  AA    V    R      A +  L            DV S   V   ++
Sbjct: 34  SGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVA 93

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH--MAYRK 116
             +E+FG I +LVN+AG    G  A++  +      +TN+ G  R+ + V+    M    
Sbjct: 94  AAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG 153

Query: 117 KGKIINVGSVTVAAPG-PWAGTYTASKAALHSLTDTLRLELGHFGI 161
            G+I+N+ S      G  +A  YTASK  +   T ++  EL   GI
Sbjct: 154 WGRIVNIAST-GGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGI 198

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  111 bits (279), Expect = 1e-30
 Identities = 42/174 (24%), Positives = 75/174 (43%), Gaps = 17/174 (9%)

Query: 5   GIGHALARAFAASDCRVVATGRSK---------ATMADLEQ--------DPRFFVQELDV 47
           G+G + A A A +   +    R +         AT  DL +          R    ++DV
Sbjct: 21  GMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDV 80

Query: 48  LSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQA 107
               ++++ ++   +  G ID+ + NAG+  +  L EV  +  ++   TN+ G    + A
Sbjct: 81  KDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAA 140

Query: 108 VVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           V P M  R  G+I+ V S+   +      +Y +SK  +  LT     +L  +GI
Sbjct: 141 VAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAAHDLVGYGI 194

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  110 bits (277), Expect = 1e-30
 Identities = 39/170 (22%), Positives = 75/170 (44%), Gaps = 16/170 (9%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMAD-----LEQDPR--FFVQELDVLSEQSVQNVL 57
           GIG A+A+  A     V     ++   A+     ++ +    F +   ++ S   V+ + 
Sbjct: 18  GIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIG-ANLESLHGVEALY 76

Query: 58  SNVLEKF------GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH 111
           S++  +        K D+L+NNAG+     + E      ++  + N   P  ++Q  +  
Sbjct: 77  SSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSR 136

Query: 112 MAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +  R   +IIN+ S       P    Y+ +K A++++T TL  +LG  GI
Sbjct: 137 L--RDNSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGARGI 184

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  110 bits (276), Expect = 3e-30
 Identities = 41/184 (22%), Positives = 64/184 (34%), Gaps = 27/184 (14%)

Query: 5   GIGHALARAFAASDCRVVATGRS-----KATMADLEQDP--RFFVQELDVLSEQ----SV 53
            IG A+A     +  RVV    +      +   +L ++      V + D+ +      S 
Sbjct: 34  RIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASC 93

Query: 54  QNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAM----------EQTFNTNVFGPMR 103
           + ++++    FG+ DVLVNNA      PL +                 +   TN   P  
Sbjct: 94  EEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFL 153

Query: 104 LVQAVVPHMAY------RKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG 157
           L  +                  I+N+    V  P      Y   K AL  LT +  LEL 
Sbjct: 154 LTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELA 213

Query: 158 HFGI 161
            +GI
Sbjct: 214 PYGI 217

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  109 bits (275), Expect = 4e-30
 Identities = 51/176 (28%), Positives = 85/176 (48%), Gaps = 19/176 (10%)

Query: 5   GIGHALARAFAASDCRVVAT----------GRSKATMADLEQ--------DPRFFVQELD 46
           G G + A   AA    ++A             + A+  DL++          +   + LD
Sbjct: 26  GQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLD 85

Query: 47  VLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQ 106
           V  + +++ ++++ +E+FG++DV+V NAGV   G + E+     +     N+ G  R ++
Sbjct: 86  VRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLR 145

Query: 107 AVVPHM-AYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           A VP M      G I+ V S       P  G Y+ASK  L +LT+TL +ELG +GI
Sbjct: 146 ATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGI 201

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  109 bits (275), Expect = 5e-30
 Identities = 46/185 (24%), Positives = 73/185 (39%), Gaps = 32/185 (17%)

Query: 5   GIGHALARAFAASDCRVVAT---------GRSKATMADLEQ--------DPRFFVQELDV 47
           G G + A   A     ++               AT  DLE+          + +  E+DV
Sbjct: 21  GQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDV 80

Query: 48  LSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQA 107
               +V   L+N + +FGK+DV+V NAG+  +G    +P+ A    F+ +  G +  V A
Sbjct: 81  RDRAAVSRELANAVAEFGKLDVVVANAGICPLGA--HLPVQAFADAFDVDFVGVINTVHA 138

Query: 108 VVPHMAYRKKGKIINVGSV-----------TVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
            +P++       II  GSV                GP    Y+ +K  + S T  L  +L
Sbjct: 139 ALPYL--TSGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQL 196

Query: 157 GHFGI 161
               I
Sbjct: 197 APQSI 201

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  107 bits (270), Expect = 1e-29
 Identities = 41/171 (23%), Positives = 61/171 (35%), Gaps = 16/171 (9%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPR------FFVQELDVLSEQSVQNVLS 58
           GIG  +A     +   V  TGR   T+  + Q+ +        V   D   E  V+++  
Sbjct: 16  GIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVV-CDSSQESEVRSLFE 74

Query: 59  NV-LEKFGKIDVLVNNAGVQCV-------GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVP 110
            V  E+ G++DVLVNNA                E P S  +   N  + G          
Sbjct: 75  QVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGAR 134

Query: 111 HMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            M    +G I+ + S   +    +   Y   KAA   L      EL   G+
Sbjct: 135 LMVPAGQGLIVVISSP-GSLQYMFNVPYGVGKAACDKLAADCAHELRRHGV 184

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  107 bits (269), Expect = 2e-29
 Identities = 44/158 (27%), Positives = 66/158 (41%), Gaps = 1/158 (0%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
            GIG A    FA    R+VA    +  + +  +        +DV    SV+   +  L  
Sbjct: 15  HGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAH 74

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
            G++D +V+ AG+       ++PL   E     N+ G   + +A    M  +  G I+  
Sbjct: 75  LGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLT 134

Query: 124 GSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            S  V         Y AS A +  LT TL LELG +GI
Sbjct: 135 ASR-VYLGNLGQANYAASMAGVVGLTRTLALELGRWGI 171

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  107 bits (270), Expect = 2e-29
 Identities = 49/166 (29%), Positives = 74/166 (44%), Gaps = 9/166 (5%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVLS 58
            GIG  +AR       RV    R +  +    ++          +  DV S   ++ +++
Sbjct: 32  SGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVA 91

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH--MAYRK 116
            V+E++G +DVLVNNAG    G  AE+          TN+ G  R+ + V+    M  R 
Sbjct: 92  AVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG 151

Query: 117 KGKIINVGSVTVAAPG-PWAGTYTASKAALHSLTDTLRLELGHFGI 161
            G+I+N+ S      G   A  Y+ASK  +   T  L LEL   GI
Sbjct: 152 TGRIVNIAST-GGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 196

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  106 bits (266), Expect = 4e-29
 Identities = 41/161 (25%), Positives = 66/161 (40%), Gaps = 3/161 (1%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVL 61
            GIG A+A   AA    V+ +  +             +      D+    SV+ + + + 
Sbjct: 16  QGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQ 75

Query: 62  EKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK-GKI 120
              G ID+LVNNA +       +V L    +  + N+ G   + +A    M    K G++
Sbjct: 76  ALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRV 135

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           I++ S T  A  P    Y A+K  +   T  L  ELG + I
Sbjct: 136 ISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNI 176

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  106 bits (266), Expect = 9e-29
 Identities = 40/201 (19%), Positives = 56/201 (27%), Gaps = 44/201 (21%)

Query: 5   GIGHALARAFAASDCRVVATGRS-----KATMADLEQD-------------------PRF 40
            +G ++A    A    V            A  A L                         
Sbjct: 20  RLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSG 79

Query: 41  FVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEV--------------P 86
                 V        +++     +G+ DVLVNNA      PL                  
Sbjct: 80  ADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAM 139

Query: 87  LSAMEQTFNTNVFGPMRLVQAVVPHMAY------RKKGKIINVGSVTVAAPGPWAGTYTA 140
            +A    F +N   P  L++A    +A            IIN+       P      YT 
Sbjct: 140 ETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTM 199

Query: 141 SKAALHSLTDTLRLELGHFGI 161
           +K AL  LT +  LEL    I
Sbjct: 200 AKGALEGLTRSAALELAPLQI 220

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  106 bits (266), Expect = 1e-28
 Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 19/176 (10%)

Query: 5   GIGHALARAFAASDCRVVAT---------GRSKATMADLEQ--------DPRFFVQELDV 47
           G G + A   A     ++A              +T  DL +          R    ++DV
Sbjct: 39  GQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDV 98

Query: 48  LSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG-PLAEVPLSAMEQTFNTNVFGPMRLVQ 106
               ++Q  + + + + G++D+++ NA +   G  L  +         + N+ G     +
Sbjct: 99  RDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITAR 158

Query: 107 AVVPHM-AYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             +PH+ A ++ G I+   S+         G Y ASK  LH L  T+ LELG   I
Sbjct: 159 VAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTMALELGPRNI 214

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  106 bits (266), Expect = 1e-28
 Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 23/180 (12%)

Query: 5   GIGHALARAFAASDCRVVAT-------------GRSKATMADLEQ--------DPRFFVQ 43
           G G + A   A     ++A                  +T  DL +        + R    
Sbjct: 22  GQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTA 81

Query: 44  ELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG-PLAEVPLSAMEQTFNTNVFGPM 102
           E+DV    +++  + + +E+ G++D++V NAG+   G  L +       +  + N+ G  
Sbjct: 82  EVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVW 141

Query: 103 RLVQAVVPHMAYRKK-GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           + V+A VPHM    + G II   SV      P  G Y A+K  +  L     +ELG   I
Sbjct: 142 KTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMI 201

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  106 bits (267), Expect = 1e-28
 Identities = 44/175 (25%), Positives = 69/175 (39%), Gaps = 18/175 (10%)

Query: 5   GIGHALARAFAASDCRVVAT---------GRSKATMADLEQ--------DPRFFVQELDV 47
           G G   A   A     +VA            ++ +  +L++          R   ++ DV
Sbjct: 57  GQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADV 116

Query: 48  LSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQA 107
               S+Q V+   L +FG ID+LV+N G+   G +  +          TN+ G     +A
Sbjct: 117 RDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRA 176

Query: 108 VVPHM-AYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           V+P M    + G +I V S       P    Y ASK  +  L  +L  E+G   I
Sbjct: 177 VLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSLANEVGRHNI 231

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  106 bits (267), Expect = 1e-28
 Identities = 40/201 (19%), Positives = 56/201 (27%), Gaps = 44/201 (21%)

Query: 5   GIGHALARAFAASDCRVVATGRS-----KATMADLEQD-------------------PRF 40
            +G ++A    A    V            A  A L                         
Sbjct: 57  RLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSG 116

Query: 41  FVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEV--------------P 86
                 V        +++     +G+ DVLVNNA      PL                  
Sbjct: 117 ADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAM 176

Query: 87  LSAMEQTFNTNVFGPMRLVQAVVPHMAY------RKKGKIINVGSVTVAAPGPWAGTYTA 140
            +A    F +N   P  L++A    +A            IIN+       P      YT 
Sbjct: 177 ETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTM 236

Query: 141 SKAALHSLTDTLRLELGHFGI 161
           +K AL  LT +  LEL    I
Sbjct: 237 AKGALEGLTRSAALELAPLQI 257

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  104 bits (262), Expect = 2e-28
 Identities = 43/168 (25%), Positives = 68/168 (40%), Gaps = 10/168 (5%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADL------EQDPRFFVQELDVLSEQSVQNVL 57
            G+G  +     A    V  T  S  T  +       + + R    + DV  ++ +  ++
Sbjct: 17  KGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIV 76

Query: 58  SNVLEKFGKIDVLVNNAGVQCV--GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
              +  FGKID L+NNAG        L +       +    N+     L++ VVP M  +
Sbjct: 77  EEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQ 136

Query: 116 KKGKIINVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
             G+IIN G     +   W     + A+K  L SLT T+  E   +GI
Sbjct: 137 NFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGI 184

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  103 bits (259), Expect = 6e-28
 Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 6/162 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVL 61
           GGIG A+AR F A    V   G  +  + ++  D     FV   ++   +S++ +     
Sbjct: 37  GGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAE 96

Query: 62  EKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
            +   ID+LVNNAG+   G    +     +     N+     L + ++  M  R+ G+II
Sbjct: 97  REMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRII 156

Query: 122 NVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
           N+ S+ V   G   G   Y A+KA L   +  L  E+    I
Sbjct: 157 NITSI-VGVVGN-PGQTNYCAAKAGLIGFSKALAQEIASRNI 196

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  102 bits (258), Expect = 7e-28
 Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 6/162 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVL 61
            GIG A+A   A    +V+ T  S++    +            L+V + +S++ VL  + 
Sbjct: 19  RGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAIT 78

Query: 62  EKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
           ++FG +D+LVNNAG+     L  +          TN+    RL +AV+  M  +++G+II
Sbjct: 79  DEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRII 138

Query: 122 NVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
           NVGSV V   G  AG   Y A+KA +   T ++  E+   G+
Sbjct: 139 NVGSV-VGTMGN-AGQANYAAAKAGVIGFTKSMAREVASRGV 178

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  102 bits (257), Expect = 9e-28
 Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 9/165 (5%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVLS 58
            GIG  +A A A+    VV T  S+A+    E        +     L++   +S+QN  +
Sbjct: 15  RGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFA 74

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
            +  +   ID+LVNNAG+     +  +     +   NTN+    R+ +  V  M  ++ G
Sbjct: 75  EIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWG 134

Query: 119 KIINVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
           +II++GSV V + G   G   Y A+KA +   + +L  E+    I
Sbjct: 135 RIISIGSV-VGSAGN-PGQTNYCAAKAGVIGFSKSLAYEVASRNI 177

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  103 bits (258), Expect = 9e-28
 Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 10/166 (6%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMAD------LEQDPRFFVQELDVLSEQSVQNVL 57
           GG+G A++R    +   V  +   +            +    F    +DV   +S +   
Sbjct: 35  GGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCA 94

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             VL  FGK+DVL+NNAG+       ++     +    T++     + +  +  M  R+ 
Sbjct: 95  EKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRF 154

Query: 118 GKIINVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
           G+I+N+GSV   + G   G   Y ++KA +H  T TL LE    GI
Sbjct: 155 GRIVNIGSV-NGSRGA-FGQANYASAKAGIHGFTKTLALETAKRGI 198

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  102 bits (257), Expect = 1e-27
 Identities = 47/160 (29%), Positives = 69/160 (43%), Gaps = 10/160 (6%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
            GIG A+A+  AA   +V  T R       L      F  E+DV    +V    + V E 
Sbjct: 25  RGIGLAIAQRLAADGHKVAVTHRGSGAPKGL------FGVEVDVTDSDAVDRAFTAVEEH 78

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
            G ++VLV+NAG+     L  +     E+  N N+ G  R+ Q     M   K G++I +
Sbjct: 79  QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFI 138

Query: 124 GSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
           GSV     G       Y ASKA +  +  ++  EL    +
Sbjct: 139 GSV-SGLWGI-GNQANYAASKAGVIGMARSIARELSKANV 176

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  102 bits (256), Expect = 1e-27
 Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 10/166 (6%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMAD------LEQDPRFFVQELDVLSEQSVQNVL 57
           GGIG ++ +       RVVA     +                F+  E +V    S +   
Sbjct: 23  GGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAF 82

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             V  + G+IDVLVNNAG+       ++     +   +TN+     + + V+  M  R  
Sbjct: 83  DKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGW 142

Query: 118 GKIINVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
           G+IIN+ SV     G   G   Y+ +KA +H  T +L  E+   G+
Sbjct: 143 GRIINISSV-NGQKGQ-FGQTNYSTAKAGIHGFTMSLAQEVATKGV 186

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  103 bits (258), Expect = 1e-27
 Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 9/165 (5%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVLS 58
            GIG  +A+  A S   V+   R++ +   +  +             DV  ++ +  V++
Sbjct: 54  RGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVIN 113

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
            +L +   +D+LVNNAG+        +     E    TN+     + Q +   M   + G
Sbjct: 114 KILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYG 173

Query: 119 KIINVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
           +IIN+ S+ V   G   G   Y++SKA +   T +L  EL    I
Sbjct: 174 RIINISSI-VGLTGN-VGQANYSSSKAGVIGFTKSLAKELASRNI 216

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  102 bits (256), Expect = 2e-27
 Identities = 51/160 (31%), Positives = 71/160 (44%), Gaps = 10/160 (6%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
            GIG A+ARAFA +  +V  T RS            F   + D+   + V+     + E 
Sbjct: 31  RGIGLAIARAFADAGDKVAITYRSGEPPE------GFLAVKCDITDTEQVEQAYKEIEET 84

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
            G ++VL+ NAGV     L  +          TN+ G  R+V+     M   KKG+++ +
Sbjct: 85  HGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLI 144

Query: 124 GSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
            SV V   G  AG   Y ASKA L     +L  ELG   I
Sbjct: 145 SSV-VGLLGS-AGQANYAASKAGLVGFARSLARELGSRNI 182

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  102 bits (256), Expect = 2e-27
 Identities = 43/170 (25%), Positives = 70/170 (41%), Gaps = 22/170 (12%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPR----FFVQELDVLSEQSVQNV 56
           GIG A A A      +V     +        A L +        F+Q  DV  +Q +++ 
Sbjct: 18  GIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ-CDVADQQQLRDT 76

Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
              V++ FG++D+LVNNAGV              E+T   N+   +      + +M+ + 
Sbjct: 77  FRKVVDHFGRLDILVNNAGVN--------NEKNWEKTLQINLVSVISGTYLGLDYMSKQN 128

Query: 117 KGK---IINVGSVTVAAPGPWAGTYTASKAALHSLTDT--LRLELGHFGI 161
            G+   IIN+ S+    P      Y ASK  +   T +  L   L + G+
Sbjct: 129 GGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGV 178

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  101 bits (254), Expect = 2e-27
 Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 10/166 (6%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD------PRFFVQELDVLSEQSVQNVL 57
            GIG A+A   A++   V+ TG S      + ++       +    E+++LSE+S+    
Sbjct: 17  RGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAF 76

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             +      ID+LVNNAG+        + L   E+    N+ G   + Q  +  M  ++ 
Sbjct: 77  EEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRW 136

Query: 118 GKIINVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
           G+I+N+ SV V   G   G   Y+ +KA L   T +L  EL    +
Sbjct: 137 GRIVNISSV-VGFTGN-VGQVNYSTTKAGLIGFTKSLAKELAPRNV 180

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  100 bits (251), Expect = 1e-26
 Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 9/165 (5%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVLS 58
            GIG A+A   A     V+ T  ++A    +               L+V    +V  ++ 
Sbjct: 38  RGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVE 97

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
           + L++FG ++VLVNNAG+        +     +   +TN+    RL +AV+  M   + G
Sbjct: 98  STLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGG 157

Query: 119 KIINVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
           +I+N+ SV V + G   G   Y A+KA +  +T  L  E+G  GI
Sbjct: 158 RIVNITSV-VGSAGN-PGQVNYAAAKAGVAGMTRALAREIGSRGI 200

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 99.2 bits (248), Expect = 2e-26
 Identities = 27/166 (16%), Positives = 45/166 (27%), Gaps = 10/166 (6%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPRFF---VQELDVLSEQSVQNVL 57
           GIG AL    A +   V+   R     +A ++            +     + +  V    
Sbjct: 12  GIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGVLDGLVCCAG 71

Query: 58  SNVLEKFGKIDVLVNNAGVQ--CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
             V      + V VN  GV     G    +                 +   A +P +   
Sbjct: 72  VGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAM 131

Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             G       +     G     Y  SK A+  L     ++    G+
Sbjct: 132 LAGDEARAIEL-AEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGV 176

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 98.3 bits (246), Expect = 4e-26
 Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 10/166 (6%)

Query: 4   GGIGHALARAFAASDCRVVATGRS-----KATMADLEQDP-RFFVQELDVLSEQSVQNVL 57
            G+G A+A         +V  G        AT  + +       V + DV + + V+N++
Sbjct: 15  RGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMV 74

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
              ++ FG+ID+LVNNAG+     + ++     +   NTN+       +AV   M  +K 
Sbjct: 75  KTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKS 134

Query: 118 GKIINVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
           GKIIN+ S+     G  AG   Y ASKA L   T ++  E    GI
Sbjct: 135 GKIINITSI-AGIIGN-AGQANYAASKAGLIGFTKSIAKEFAAKGI 178

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 98.0 bits (245), Expect = 6e-26
 Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 10/162 (6%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVL 61
            GIG A+AR       +V+ +G ++  +  L       + ++  ++ +++   N++    
Sbjct: 24  SGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLI---- 79

Query: 62  EKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
            K   +D+LV NAG+        +     ++  + N+     L +  +  M  ++ G+II
Sbjct: 80  SKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRII 139

Query: 122 NVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
           N+ S+ V   G   G   Y ASKA L  +T +L  E+   GI
Sbjct: 140 NISSI-VGIAGN-PGQANYCASKAGLIGMTKSLSYEVATRGI 179

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 96.4 bits (241), Expect = 2e-25
 Identities = 43/167 (25%), Positives = 68/167 (40%), Gaps = 11/167 (6%)

Query: 4   GGIGHALARAFAASDCRVV-ATGRSKATMADLEQD------PRFFVQELDVLSEQSVQNV 56
            GIG A+A   A     +    G+++    ++ ++      P   V   ++L  ++   +
Sbjct: 11  RGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATAL 70

Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
           +    E  G +D LVNNAG+     L  +     E     N+    R  +  V  M   +
Sbjct: 71  VHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR 130

Query: 117 KGKIINVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
            G+I+N+ SV V   G   G   Y ASKA L   T  +  E    GI
Sbjct: 131 FGRIVNITSV-VGILGN-PGQANYVASKAGLIGFTRAVAKEYAQRGI 175

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 96.5 bits (241), Expect = 2e-25
 Identities = 45/173 (26%), Positives = 70/173 (40%), Gaps = 20/173 (11%)

Query: 5   GIGHALARAFAASDCRVVA----TGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           G+G A+ R  A     V+         +   A+L    RF     DV +E      L+  
Sbjct: 18  GLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFR--NADVTNEADATAALAFA 75

Query: 61  LEKFGKIDVLVNNAGV----QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
            ++FG +  LVN AG     + +G      L +  +T   N+ G   +++     M+  +
Sbjct: 76  KQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGE 135

Query: 117 ------KGKIINVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
                 +G I+N  S  +AA     G   Y ASK  + +LT     EL  FGI
Sbjct: 136 PDADGERGVIVNTAS--IAAFDGQIGQAAYAASKGGVAALTLPAARELARFGI 186

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 96.0 bits (240), Expect = 3e-25
 Identities = 48/166 (28%), Positives = 74/166 (44%), Gaps = 10/166 (6%)

Query: 4   GGIGHALARAFAASDCRVV-ATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVL 57
            GIG A+A   A     VV     ++    ++  +             DV + + V N++
Sbjct: 14  RGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMV 73

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
              ++ FG++D+LVNNAGV     L  +     +   NTN+ G     +AV   M  ++ 
Sbjct: 74  KQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRH 133

Query: 118 GKIINVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
           G+I+N+ SV V   G   G   Y A+KA +  LT T   EL    I
Sbjct: 134 GRIVNIASV-VGVTGN-PGQANYVAAKAGVIGLTKTSAKELASRNI 177

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 95.6 bits (239), Expect = 4e-25
 Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 10/166 (6%)

Query: 4   GGIGHALARAFAASDCRV-VATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVL 57
            GIG ++A   A     V V    SK     + ++        F  + +V     V+ ++
Sbjct: 14  RGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMI 73

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             V+ +FG +DVLVNNAG+     L  +     +   +TN+ G    +Q   P M  ++ 
Sbjct: 74  KEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRS 133

Query: 118 GKIINVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
           G IIN+ SV V A G   G   Y A+KA +  LT +   EL   GI
Sbjct: 134 GAIINLSSV-VGAVGN-PGQANYVATKAGVIGLTKSAARELASRGI 177

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 96.3 bits (240), Expect = 4e-25
 Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 12/154 (7%)

Query: 5   GIGHALARAFAA-SDCRVVATGRS----KATMADLEQ---DPRFFVQELDVLSEQSVQNV 56
           GIG A+ R         VV T R     +A +  L+     PRF   +LD+   QS++ +
Sbjct: 15  GIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFH--QLDIDDLQSIRAL 72

Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
              + +++G +DVLVNNAG+              E T  TN FG   +   ++P +  + 
Sbjct: 73  RDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLI--KP 130

Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD 150
           +G+++NV S+               K    ++T+
Sbjct: 131 QGRVVNVSSIMSVRALKSCSPELQQKFRSETITE 164

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 96.1 bits (240), Expect = 4e-25
 Identities = 53/166 (31%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMAD------LEQDPRFFVQELDVLSEQSVQNVL 57
            GIG A+A   AA+  +V     S A  AD             F  + DV  E  V+ + 
Sbjct: 38  RGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALF 97

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
           + V+E++G++DVLVNNAG+     L  +     +   + N+ G     +A    M  ++ 
Sbjct: 98  AAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRS 157

Query: 118 GKIINVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
           G+IIN+ SV V   G   G   Y+A+KA +  LT T+  EL   GI
Sbjct: 158 GRIINIASV-VGEMGN-PGQANYSAAKAGVIGLTKTVAKELASRGI 201

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 95.2 bits (238), Expect = 5e-25
 Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 10/166 (6%)

Query: 4   GGIGHALARAFAASDCRVVATGRS-----KATMADLEQD-PRFFVQELDVLSEQSVQNVL 57
            GIG A+A +   + C+V+          +     +E    +      DV  E  V+ ++
Sbjct: 11  RGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMM 70

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
              ++ +G IDV+VNNAG+     L  +  S  ++  + N+ G     QA    M  ++K
Sbjct: 71  KTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRK 130

Query: 118 GKIINVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
           G+IIN+ SV V   G   G   Y A+KA +   + T   E     I
Sbjct: 131 GRIINIASV-VGLIGN-IGQANYAAAKAGVIGFSKTAAREGASRNI 174

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 96.1 bits (240), Expect = 5e-25
 Identities = 36/179 (20%), Positives = 63/179 (35%), Gaps = 26/179 (14%)

Query: 5   GIGHALARAFAASDCRVVAT---------GRSKATMADLEQ--------DPRFFVQELDV 47
           G G A A   AA    ++A              AT  +L            R   ++ DV
Sbjct: 24  GQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADV 83

Query: 48  LSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQA 107
              +S+   L   L++ G++D++V NAG+  +               + N+ G    ++ 
Sbjct: 84  RDRESLSAALQAGLDELGRLDIVVANAGIAPM----SAGDDGWHDVIDVNLTGVYHTIKV 139

Query: 108 VVPHM-AYRKKGKIINVGSVT----VAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            +P +      G I+ + S      V +  P +  Y A+K  +  L       L    I
Sbjct: 140 AIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMI 198

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 95.7 bits (239), Expect = 5e-25
 Identities = 43/174 (24%), Positives = 68/174 (39%), Gaps = 18/174 (10%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQ------------DPRFFVQELDVLSEQ 51
            GIG A++   A     V A    +A   +  +                   + DV   +
Sbjct: 17  SGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEAR 76

Query: 52  SVQNVLSNVLEKFGKI-DVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVP 110
           + + +L  V   F +   V+V+ AG+     L  +     ++    N+ G   + QA   
Sbjct: 77  AARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQ 136

Query: 111 HM-AYRKKGKIINVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
            + +   +G IIN+ S+ V   G   G   Y ASKA +  LT T   ELG  GI
Sbjct: 137 ALVSNGCRGSIINISSI-VGKVGN-VGQTNYAASKAGVIGLTQTAARELGRHGI 188

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 94.7 bits (236), Expect = 2e-24
 Identities = 33/172 (19%), Positives = 58/172 (33%), Gaps = 17/172 (9%)

Query: 5   GIGHALARAFAASDCRVVA----TGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           G+G A  R   A    VV       + KA   +L     F     +V SE SV   +   
Sbjct: 41  GLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFV--STNVTSEDSVLAAIEAA 98

Query: 61  LEKFGKIDVLVNNAGVQCVGPL-----AEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
            +       +V + G      +     +   +    +T +  + G   + + V   +A  
Sbjct: 99  NQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAA 158

Query: 116 K------KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +      +G ++   S+           Y A+KA +  LT     +L   GI
Sbjct: 159 EPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDLSSAGI 210

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 93.9 bits (234), Expect = 2e-24
 Identities = 46/175 (26%), Positives = 69/175 (39%), Gaps = 22/175 (12%)

Query: 5   GIGHALARAFAASDCRVVA----TGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNV 60
           G+G A A          V         +A    L  +  F     DV SE+ VQ  L+  
Sbjct: 23  GLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFA--PADVTSEKDVQTALALA 80

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEV------PLSAMEQTFNTNVFGPMRLVQAVVPHMAY 114
             KFG++DV VN AG+        +       L   ++  + N+ G   +++ V   M  
Sbjct: 81  KGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQ 140

Query: 115 RK------KGKIINVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
            +      +G IIN  S  VAA     G   Y+ASK  +  +T  +  +L   GI
Sbjct: 141 NEPDQGGQRGVIINTAS--VAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGI 193

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 92.0 bits (229), Expect = 1e-23
 Identities = 34/186 (18%), Positives = 57/186 (30%), Gaps = 48/186 (25%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK- 63
           GIG A  +   A+  ++V      A +              D+ + +  +  +++VL K 
Sbjct: 12  GIGAATRKVLEAAGHQIVGIDIRDAEVI------------ADLSTAEGRKQAIADVLAKC 59

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
              +D LV  AG+     +            + N FG   L+ A +P +    +   + +
Sbjct: 60  SKGMDGLVLCAGLGPQTKVLG-------NVVSVNYFGATELMDAFLPALKKGHQPAAVVI 112

Query: 124 GSV--------------------------TVAAPGPWAGT--YTASKAALHSLTDTLRLE 155
            SV                           V   G   G   Y  SK AL          
Sbjct: 113 SSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAA 172

Query: 156 LGHFGI 161
            G  G+
Sbjct: 173 WGEAGV 178

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 86.9 bits (216), Expect = 1e-21
 Identities = 39/171 (22%), Positives = 66/171 (38%), Gaps = 18/171 (10%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF 64
           G+G A  +    +  +VV        +     D   F    DV  E +V + L    E  
Sbjct: 20  GLGLATTKRLLDAGAQVVVLDIRGEDVVADLGDRARFAA-ADVTDEAAVASALDLA-ETM 77

Query: 65  GKIDVLVNNAGV----QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMA------- 113
           G + ++VN AG     + +       L+A  +  + N+ G   +++     +A       
Sbjct: 78  GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGP 137

Query: 114 -YRKKGKIINVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
              ++G IIN  S  VAA     G   Y+ASK  +  +T  +  +L    I
Sbjct: 138 NAEERGVIINTAS--VAAFDGQIGQAAYSASKGGVVGMTLPIARDLASHRI 186

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 88.5 bits (220), Expect = 2e-21
 Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 7/163 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKA--TMADLEQDPRFFVQELDVLSEQSVQNVLSNVL 61
            GIG  +A  FA     VVA     A   +  +          LDV ++ +V  + ++V 
Sbjct: 223 RGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVT 282

Query: 62  EKFG-KIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
           E  G K+D+LVNNAG+     LA +     +     N+  P RL + +V +    + G++
Sbjct: 283 EHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRV 342

Query: 121 INVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
           I + S+     G   G   Y  +KA +  L + L   L   GI
Sbjct: 343 IGLSSM-AGIAGN-RGQTNYATTKAGMIGLAEALAPVLADKGI 383

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 85.0 bits (211), Expect = 4e-21
 Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 26/171 (15%)

Query: 5   GIGHALARAFAASDCRVVATGRSKATMADLEQDPR--FFVQELDVLSEQSVQNVLSNVLE 62
           G+G A A A  A   RVV        + DL ++     +V+  DV  E+ V+  ++   E
Sbjct: 13  GLGRAAALALKARGYRVV--------VLDLRREGEDLIYVE-GDVTREEDVRRAVARAQE 63

Query: 63  KFGKIDVLVNNAGV----QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-- 116
               +  +V+ AGV    + +G      L +  +    N+ G   +++     M      
Sbjct: 64  -EAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPD 122

Query: 117 ----KGKIINVGSVTVAAPGPWAG--TYTASKAALHSLTDTLRLELGHFGI 161
               +G I+N  S  VAA     G   Y ASK  + +LT     EL  +GI
Sbjct: 123 AEGQRGVIVNTAS--VAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGI 171

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 84.3 bits (209), Expect = 2e-20
 Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 11/169 (6%)

Query: 4   GGIGHALARAFAASDCRVVA--TGRSKATMADLEQDPRFFVQEL---------DVLSEQS 52
           GG+G A A AFA     VV    G     +          V+E+         +  S ++
Sbjct: 19  GGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEA 78

Query: 53  VQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM 112
            + ++   L+ FG+IDV+VNNAG+      + +     +     ++ G  ++ +A   HM
Sbjct: 79  GEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHM 138

Query: 113 AYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             +  G+II   S +          Y+A+K  L  L +TL +E     I
Sbjct: 139 KKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNI 187

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 85.2 bits (211), Expect = 4e-20
 Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 11/169 (6%)

Query: 4   GGIGHALARAFAASDCRVVA--TGRSKATMADLEQDPRFFVQELD------VLSEQSV-- 53
            G+G   A  FA    +VV    G + +     ++     V E+       V    SV  
Sbjct: 29  AGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVID 88

Query: 54  -QNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM 112
              V+   ++ FG++D+LVNNAG+     L +          + ++ G  +  QA  P+M
Sbjct: 89  GAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYM 148

Query: 113 AYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             +  G+II   S +          YTA+K  L  L +T+ +E     +
Sbjct: 149 KKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNV 197

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 83.2 bits (206), Expect = 2e-19
 Identities = 34/169 (20%), Positives = 67/169 (39%), Gaps = 11/169 (6%)

Query: 4   GGIGHALARAFAASDCRVVA--TGRSKATMADLEQDPRFFVQEL---------DVLSEQS 52
           GG+G   +  FA    +VV    G +        +     V E+         D  +   
Sbjct: 18  GGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLD 77

Query: 53  VQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM 112
              ++   ++ FG + V++NNAG+     + ++     +   + ++ G   + +A  P+ 
Sbjct: 78  GDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYF 137

Query: 113 AYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             +K G+I+N  S            Y ++K+AL    +TL  E   + I
Sbjct: 138 QKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGAKYNI 186

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 77.4 bits (191), Expect = 2e-17
 Identities = 37/160 (23%), Positives = 75/160 (46%), Gaps = 3/160 (1%)

Query: 4   GGIGHALARAFAASDCRVVA--TGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVL 61
            G+G   A+ FA    +VV      +  T+ +++        +   +++   + ++ NV+
Sbjct: 332 AGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKD-SEAIIKNVI 390

Query: 62  EKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
           +K+G ID+LVNNAG+      A++     +     ++ G   L +   P+   ++ G+II
Sbjct: 391 DKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRII 450

Query: 122 NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           N+ S +          Y++SKA +  L+ T+ +E     I
Sbjct: 451 NITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNI 490

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 77.3 bits (190), Expect = 8e-18
 Identities = 37/183 (20%), Positives = 61/183 (33%), Gaps = 39/183 (21%)

Query: 5   GIGHALARAFAASDCRVVATGRS----KATMADLEQDPR---FFVQELDVLSE-QSVQNV 56
           GIG  + +  +++   VV T R        +  L+        F Q LDV     ++ ++
Sbjct: 23  GIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQ-LDVTDPIATMSSL 81

Query: 57  LSNVLEKFGKIDVLVNNAGV------------------------------QCVGPLAEVP 86
              +   FGK+D+LVNNAGV                                   L    
Sbjct: 82  ADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSET 141

Query: 87  LSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALH 146
               E+    N  G   + + ++P +      +I+NV S T +       T         
Sbjct: 142 YELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGD 201

Query: 147 SLT 149
           +LT
Sbjct: 202 ALT 204

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 75.9 bits (187), Expect = 3e-17
 Identities = 47/185 (25%), Positives = 71/185 (38%), Gaps = 33/185 (17%)

Query: 4   GGIGHALARAFAASDCRVV---------ATGRSKATMADLEQDPRFFVQEL--------- 45
           GGIG A A AFAA   RVV          +  S  + A         V E+         
Sbjct: 37  GGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQS------VVDEITAAGGEAVA 90

Query: 46  ---DVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPM 102
              +V        ++   +E FG +DVLVNNAG+     +A       +     ++ G  
Sbjct: 91  DGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHF 150

Query: 103 RLVQAVVPHMAYRKK------GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
             ++    +     K      G+IIN  S          G Y+A+KA + +LT     E+
Sbjct: 151 ATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEM 210

Query: 157 GHFGI 161
           G +G+
Sbjct: 211 GRYGV 215

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 63.8 bits (156), Expect = 5e-13
 Identities = 34/125 (27%), Positives = 49/125 (39%), Gaps = 12/125 (9%)

Query: 4   GGIGHALARAFAASDCRVVATGRS--KATMADLEQDPRFFVQELDVLSEQSVQNVLSNVL 61
            G+G   AR  A     V+   R   K   A      +  V+ELD+    SV+       
Sbjct: 26  SGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFA---- 81

Query: 62  EKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
           +     DVL+NNAG+  V P A       E    TN  G   L   ++P +  R    ++
Sbjct: 82  DGVSGADVLINNAGIMAV-PYALTV-DGFESQIGTNHLGHFALTNLLLPRLTDR----VV 135

Query: 122 NVGSV 126
            V S+
Sbjct: 136 TVSSM 140

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 42.9 bits (101), Expect = 1e-05
 Identities = 22/154 (14%), Positives = 48/154 (31%), Gaps = 19/154 (12%)

Query: 4   GGIGHALARAFAASDCRVVATGRS----KATMADLEQDPRFFVQELDVLSEQSVQNVLSN 59
           G +G   A   A     VV  GR     +A    + +  +  V   +   + S    +  
Sbjct: 129 GPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKG 188

Query: 60  VLEKFGKIDVLVNN--AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
                     +      G++ +   A    S++E   + N   P+ +          ++ 
Sbjct: 189 A-------HFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPLGIGGIDATDKG-KEY 240

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDT 151
           G     G++ +   G         +A +  L ++
Sbjct: 241 GGKRAFGALGI---GGLK--LKLHRACIAKLFES 269

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 39.1 bits (90), Expect = 4e-04
 Identities = 21/126 (16%), Positives = 35/126 (27%), Gaps = 19/126 (15%)

Query: 10  LARAFAASDCRVVATGRSKATMADLEQDPR---FFVQELDVLSEQSVQNVLSNVLEKFGK 66
              AF  S C+++ T R K     L                L+   V+++L   L+   +
Sbjct: 258 AWNAFNLS-CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDC--R 314

Query: 67  IDVLVNNAGVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGS 125
              L           P     ++   +                  H+   K   II   S
Sbjct: 315 PQDLPREV---LTTNPRRLSIIAESIRDG------LATWDN--WKHVNCDKLTTIIES-S 362

Query: 126 VTVAAP 131
           + V  P
Sbjct: 363 LNVLEP 368

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	162
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.98
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.98
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.98
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.98
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.98
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.98
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.98
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.97
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.97
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.97
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.97
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.97
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.97
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.97
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.96
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.96
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.96
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.96
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.96
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.96
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.94
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.94
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.94
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.94
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.93
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.93
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.92
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.92
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.91
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.91
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.88
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.84
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.84
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.84
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.84
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.84
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.84
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.84
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.83
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.83
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.83
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.83
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.82
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.82
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.82
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.82
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.81
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.81
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.81
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.81
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.81
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.8
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.8
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.8
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.8
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.8
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.8
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.8
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.8
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.8
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.8
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.8
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.79
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.79
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.79
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.79
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.78
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.77
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.77
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.77
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.77
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.77
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.77
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.76
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.76
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.75
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.75
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.75
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.74
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.74
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.74
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.74
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.74
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.73
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.73
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.72
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.71
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.71
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.7
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.7
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.69
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.69
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.68
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.68
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.68
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.67
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.67
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.65
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.65
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.63
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.59
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.59
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.56
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.55
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.54
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.53
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.51
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.45
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.43
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.41
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.4
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.39
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.38
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.38
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.37
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.33
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.31
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.31
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.28
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.17
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	98.97
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.93
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	98.88
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.83
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.75
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.67
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.61
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.49
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.46
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.42
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.4
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.35
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.3
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.3
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.25
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.25
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.2
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.09
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.06
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.03
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.98
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.97
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.96
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.9
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.9
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.88
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.87
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.86
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.84
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	97.84
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.82
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.76
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.7
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.7
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.69
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.66
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.66
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.65
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.65
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.61
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.61
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.6
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.53
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.53
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.48
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.48
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.44
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.43
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.42
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.41
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.4
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.39
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.38
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.35
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.31
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.27
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.25
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.24
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.24
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.22
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	97.17
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.17
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.17
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.13
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.13
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.12
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.07
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.06
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.04
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.0
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.98
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	96.97
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.97
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	96.95
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.95
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.92
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	96.9
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.89
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.85
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.84
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.81
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.79
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.78
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.77
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.74
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.74
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.74
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.66
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.64
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	96.63
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.61
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.6
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.59
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.58
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.54
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.5
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	96.48
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.48
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.45
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.35
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.33
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.32
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.28
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.2
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.18
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.17
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.15
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	96.14
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.12
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	96.11
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.09
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.05
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.02
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.02
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.01
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.01
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.0
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	95.89
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.88
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	95.83
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	95.8
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	95.8
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	95.79
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	95.74
1lnq_A	336	MTHK channels, potassium channel related protein;	95.65
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	95.65
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	95.61
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	95.6
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	95.58
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	95.56
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	95.54
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	95.53
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	95.52
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	95.52
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	95.48
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	95.48
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	95.45
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	95.41
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	95.35
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	95.33
2p4q_A	497	6-phosphogluconate dehydrogenase, decarboxylating;	95.31
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	95.28
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.27
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	95.27
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	95.26
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.24
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	95.22
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	95.21
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	95.19
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	95.19
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	95.19
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	95.09
3ojo_A	431	CAP5O; rossmann fold, complex with cofactor NAD an	95.08
1pgj_A	478	6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o	95.03
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	94.98
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	94.95
2pgd_A	482	6-phosphogluconate dehydrogenase; oxidoreductase (	94.94
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	94.93
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	94.92
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	94.9
2zyd_A	480	6-phosphogluconate dehydrogenase, decarboxylating;	94.9
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	94.8
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	94.76
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	94.71
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	94.66
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	94.65
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	94.64
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	94.62
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	94.59
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	94.57
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	94.56
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	94.5
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	94.49
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	94.49
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	94.38
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	94.31
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	94.31
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	94.27
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	94.22
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	94.21
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	94.2
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	94.19
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	94.19
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	94.08

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=4.5e-43  Score=248.02  Aligned_cols=162  Identities=31%  Similarity=0.447  Sum_probs=153.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||+++|+.|+++|++|++++|+.+.++++.+     ..++.++.+|++|+++++++++++.+++|+||++|||||
T Consensus        14 Gas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVNNAG   93 (254)
T 4fn4_A           14 GAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAG   93 (254)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             CCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence            899999999999999999999999999988776644     367889999999999999999999999999999999999


Q ss_pred             CCC-CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           76 VQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        76 ~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      +.. ..++.+++.++|++++++|+.++++++|+++|+|++++.|+||++||..+..+.+....|+++|+|+.+|+|+|+.
T Consensus        94 i~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asKaal~~ltr~lA~  173 (254)
T 4fn4_A           94 IMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAA  173 (254)
T ss_dssp             CCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHHHHHHHHHHHHHH
Confidence            764 4789999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       174 ela~~gIr  181 (254)
T 4fn4_A          174 HYGDQGIR  181 (254)
T ss_dssp             HHGGGTEE
T ss_pred             HhhhhCeE
Confidence            99999986

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=2.7e-42  Score=244.17  Aligned_cols=162  Identities=29%  Similarity=0.421  Sum_probs=153.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||+++|+.|+++|++|++++|+.+.+++..+     ..++.++.+|++|+++++++++++.+++|++|++|||||
T Consensus        16 Gas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG   95 (255)
T 4g81_D           16 GSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAG   95 (255)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCCCEEEECCC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCC
Confidence            899999999999999999999999999887776543     367889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-CCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      +....++.+++.++|++++++|+.++++++|+++|+|.++ ++|+||++||..+..+.|....|++||+|+.+|+|+++.
T Consensus        96 ~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltr~lA~  175 (255)
T 4g81_D           96 IQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAA  175 (255)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHHHHHHHHHHHHHHH
Confidence            9988999999999999999999999999999999999765 579999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       176 ela~~gIr  183 (255)
T 4g81_D          176 EWAQFNIQ  183 (255)
T ss_dssp             HHGGGTEE
T ss_pred             HhcccCeE
Confidence            99999986

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=3.9e-41  Score=237.24  Aligned_cols=160  Identities=24%  Similarity=0.379  Sum_probs=151.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      ||++|||+++|+.|+++|++|++++|+++.++++.++ .+..++++|++|+++++++++++.+++|++|++|||||....
T Consensus         9 Gas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNNAG~~~~   88 (247)
T 3ged_A            9 GGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNNACRGSK   88 (247)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred             cCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence            8999999999999999999999999999888877654 678899999999999999999999999999999999999888


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccC
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHF  159 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~  159 (162)
                      .++.+++.++|++++++|+.+++.++|++.|.|+++ +|+||++||..+..+.|....|++||+|+.+|+|+++.|+++ 
T Consensus        89 ~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~G~IInisS~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~-  166 (247)
T 3ged_A           89 GILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN-KGRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGP-  166 (247)
T ss_dssp             CGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred             CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCcEEEEeecccccCCCCCHHHHHHHHHHHHHHHHHHHHHCC-
Confidence            999999999999999999999999999999999765 599999999999999999999999999999999999999997 


Q ss_pred             CCC
Q 042185          160 GID  162 (162)
Q Consensus       160 gi~  162 (162)
                      |||
T Consensus       167 ~Ir  169 (247)
T 3ged_A          167 DVL  169 (247)
T ss_dssp             TSE
T ss_pred             CCE
Confidence            886

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=4.6e-41  Score=239.89  Aligned_cols=160  Identities=32%  Similarity=0.394  Sum_probs=152.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||+++|+.|+++|++|++++|+.+.+++..+  ..+...+.+|++|+++++++++++.+++|+||++|||||...
T Consensus        36 Gas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~  115 (273)
T 4fgs_A           36 GATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGS  115 (273)
T ss_dssp             SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCC
T ss_pred             CcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            899999999999999999999999999998887654  367889999999999999999999999999999999999988


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ..++.+++.++|++.+++|+.++++++|+++|+|++  .|+||++||..+..+.|....|+++|+|+.+|+|+++.||++
T Consensus       116 ~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~--~G~IInisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~Ela~  193 (273)
T 4fgs_A          116 MLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR--GSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKD  193 (273)
T ss_dssp             CCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             CCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCeEEEEeehhhccCCCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence            899999999999999999999999999999999954  589999999999999999999999999999999999999999


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +|||
T Consensus       194 ~gIr  197 (273)
T 4fgs_A          194 RGIR  197 (273)
T ss_dssp             SCEE
T ss_pred             cCeE
Confidence            9986

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=1.9e-39  Score=230.36  Aligned_cols=160  Identities=25%  Similarity=0.346  Sum_probs=146.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhh----hcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADL----EQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~----~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||++|||+++|+.|+++|++|++++|+.+..+.+    ....+..++.+|++|+++++++++++.+++|++|++|||||+
T Consensus        14 Gas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDiLVNnAGi   93 (258)
T 4gkb_A           14 GGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGV   93 (258)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             CCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence            8999999999999999999999999987654322    225788999999999999999999999999999999999998


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHh
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                      ....+ .+.+.++|++.+++|+.+++.++|+++|+|+++ +|+||++||..+..+.+....|++||+|+.+|+|+++.|+
T Consensus        94 ~~~~~-~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~el  171 (258)
T 4gkb_A           94 NDGIG-LDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-RGAIVNISSKTAVTGQGNTSGYCASKGAQLALTREWAVAL  171 (258)
T ss_dssp             CCCCC-TTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTHHHHCCSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCC-ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEeehhhccCCCCchHHHHHHHHHHHHHHHHHHHh
Confidence            65444 478999999999999999999999999999654 5999999999999999999999999999999999999999


Q ss_pred             ccCCCC
Q 042185          157 GHFGID  162 (162)
Q Consensus       157 ~~~gi~  162 (162)
                      +++|||
T Consensus       172 a~~gIr  177 (258)
T 4gkb_A          172 REHGVR  177 (258)
T ss_dssp             GGGTCE
T ss_pred             cccCeE
Confidence            999997

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=4.2e-39  Score=225.70  Aligned_cols=154  Identities=32%  Similarity=0.412  Sum_probs=140.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||++|||+++|+.|+++|++|++++|+.+.+++. .+..+..+.+|++|+++++++++    ++|++|++|||||+.  .
T Consensus        18 Gas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~----~~g~iDiLVNNAGi~--~   90 (242)
T 4b79_A           18 GGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP-RHPRIRREELDITDSQRLQRLFE----ALPRLDVLVNNAGIS--R   90 (242)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC-CCTTEEEEECCTTCHHHHHHHHH----HCSCCSEEEECCCCC--C
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh-hcCCeEEEEecCCCHHHHHHHHH----hcCCCCEEEECCCCC--C
Confidence            8999999999999999999999999998876543 34678899999999999887764    579999999999985  4


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccCC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG  160 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~g  160 (162)
                      ++.+++.++|++++++|+.++++++|+++|.|+++ +|+||++||..+..+.++...|++||+++.+|+|+|+.||+++|
T Consensus        91 ~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~Ela~~g  169 (242)
T 4b79_A           91 DREEYDLATFERVLRLNLSAAMLASQLARPLLAQR-GGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAER  169 (242)
T ss_dssp             GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeeccccCCCCCCHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence            67789999999999999999999999999999654 59999999999999999999999999999999999999999999


Q ss_pred             CC
Q 042185          161 ID  162 (162)
Q Consensus       161 i~  162 (162)
                      ||
T Consensus       170 Ir  171 (242)
T 4b79_A          170 IR  171 (242)
T ss_dssp             EE
T ss_pred             eE
Confidence            97

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=4.9e-39  Score=225.82  Aligned_cols=157  Identities=24%  Similarity=0.305  Sum_probs=142.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh--hHHhhhc-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA--TMADLEQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~--~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      ||++|||+++|+.|+++|++|++++|+.+  ..+++.. ..+...+.+|++|+++++.+++     ++++|++|||||+.
T Consensus        16 Gas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~-----~g~iDiLVNNAGi~   90 (247)
T 4hp8_A           16 GANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFT-----DAGFDILVNNAGII   90 (247)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSST-----TTCCCEEEECCCCC
T ss_pred             CcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH-----hCCCCEEEECCCCC
Confidence            89999999999999999999999999853  2333333 4678899999999998887763     48999999999998


Q ss_pred             CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHh
Q 042185           78 CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                      ...++.+++.++|++++++|+.++++++|+++|.|.+++ .|+||++||..+..+.+....|++||+++.+|+|+++.||
T Consensus        91 ~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asKaav~~ltr~lA~El  170 (247)
T 4hp8_A           91 RRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEW  170 (247)
T ss_dssp             CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHHHHHHHHHHHHHHHH
Confidence            889999999999999999999999999999999998764 7999999999999999999999999999999999999999


Q ss_pred             ccCCCC
Q 042185          157 GHFGID  162 (162)
Q Consensus       157 ~~~gi~  162 (162)
                      +++|||
T Consensus       171 a~~gIr  176 (247)
T 4hp8_A          171 AAKGIN  176 (247)
T ss_dssp             GGGTEE
T ss_pred             hhcCeE
Confidence            999986

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=2.4e-38  Score=225.19  Aligned_cols=157  Identities=24%  Similarity=0.379  Sum_probs=143.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC--
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC--   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~--   78 (162)
                      ||++|||+++|+.|+++|++|++++|+.+..     .....++.+|++++++++.+++++.+++|++|++|||||...  
T Consensus        18 Gas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~   92 (261)
T 4h15_A           18 AGTKGAGAATVSLFLELGAQVLTTARARPEG-----LPEELFVEADLTTKEGCAIVAEATRQRLGGVDVIVHMLGGSSAA   92 (261)
T ss_dssp             CCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-----SCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEECCCCCCCC
T ss_pred             ccCcHHHHHHHHHHHHcCCEEEEEECCchhC-----CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCccC
Confidence            8999999999999999999999999975421     123457899999999999999999999999999999999753  


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCC-CchhhhHhHHHHHHHHHHHHHHhc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGP-WAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                      ..++.+++.++|++.+++|+.++++++|+++|+|++++.|+||++||..+..+.| ....|++||+|+.+|+|+|+.|++
T Consensus        93 ~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~asKaal~~lt~~lA~Ela  172 (261)
T 4h15_A           93 GGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYAAAKAALSTYSKAMSKEVS  172 (261)
T ss_dssp             SSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHHHHHHHHHHHHHHHHHHhh
Confidence            3578999999999999999999999999999999999999999999999999876 578899999999999999999999


Q ss_pred             cCCCC
Q 042185          158 HFGID  162 (162)
Q Consensus       158 ~~gi~  162 (162)
                      ++|||
T Consensus       173 ~~gIr  177 (261)
T 4h15_A          173 PKGVR  177 (261)
T ss_dssp             GGTEE
T ss_pred             hhCeE
Confidence            99986

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=5.1e-37  Score=219.02  Aligned_cols=162  Identities=29%  Similarity=0.379  Sum_probs=151.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC------CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++.++      .++.++.+|++|+++++++++++.++++++|++||||
T Consensus        17 Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnA   96 (262)
T 3pk0_A           17 GGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANA   96 (262)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence            8999999999999999999999999998876654331      5788999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccccc-CCCCCchhhhHhHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVA-APGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      |.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+. .+.++...|+++|+++++|+++++
T Consensus        97 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~l~~~la  176 (262)
T 3pk0_A           97 GVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAA  176 (262)
T ss_dssp             CCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhHHHHHHHHHHHHHHH
Confidence            9988888999999999999999999999999999999998888999999999886 788899999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       177 ~e~~~~gi~  185 (262)
T 3pk0_A          177 IELAPHKIT  185 (262)
T ss_dssp             HHHGGGTCE
T ss_pred             HHHHhhCcE
Confidence            999999986

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=1.7e-37  Score=219.85  Aligned_cols=162  Identities=28%  Similarity=0.417  Sum_probs=152.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC--CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||+++|++|+++|++|++++|+.+..+++.++  ....++.+|++|+++++++++++.+++|++|++|||||+..
T Consensus        16 Gas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~   95 (248)
T 3op4_A           16 GASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITR   95 (248)
T ss_dssp             SCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            8999999999999999999999999998877765442  45778999999999999999999999999999999999988


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ..++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|+++|+++++|+++++.|+++
T Consensus        96 ~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~  175 (248)
T 3op4_A           96 DNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVAS  175 (248)
T ss_dssp             CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence            88889999999999999999999999999999999888899999999999999999999999999999999999999999


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +|||
T Consensus       176 ~gi~  179 (248)
T 3op4_A          176 RGVT  179 (248)
T ss_dssp             GTEE
T ss_pred             hCeE
Confidence            9885

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=7.5e-37  Score=218.58  Aligned_cols=161  Identities=25%  Similarity=0.436  Sum_probs=152.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||++|||+++|++|+++|++|++++|+.+.+++... ....++.+|++|.++++.+++++.+.+|++|++|||||.....
T Consensus        23 Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~  101 (266)
T 3p19_A           23 GASSGIGEAIARRFSEEGHPLLLLARRVERLKALNL-PNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLG  101 (266)
T ss_dssp             STTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCC-TTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhc-CCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCC
Confidence            899999999999999999999999999888776643 3788999999999999999999999999999999999998888


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccCC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG  160 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~g  160 (162)
                      ++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|+++|+++++|+++++.|++++|
T Consensus       102 ~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~g  181 (266)
T 3p19_A          102 QIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASN  181 (266)
T ss_dssp             CTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHHHHHHHHHHHHHHHhcccC
Confidence            89999999999999999999999999999999988889999999999999999999999999999999999999999999


Q ss_pred             CC
Q 042185          161 ID  162 (162)
Q Consensus       161 i~  162 (162)
                      ||
T Consensus       182 i~  183 (266)
T 3p19_A          182 VR  183 (266)
T ss_dssp             CE
T ss_pred             cE
Confidence            86

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=6.8e-37  Score=217.71  Aligned_cols=161  Identities=34%  Similarity=0.510  Sum_probs=151.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++.+     ..++.++.+|++|+++++++++++.++++++|++|||||
T Consensus        19 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg   98 (256)
T 3gaf_A           19 GAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAG   98 (256)
T ss_dssp             SCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            899999999999999999999999999887665533     367889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....++ +.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|+++|+++++|+++++.|
T Consensus        99 ~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e  177 (256)
T 3gaf_A           99 GGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFD  177 (256)
T ss_dssp             CCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence            9877777 899999999999999999999999999999888899999999999999999999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      ++++|||
T Consensus       178 ~~~~gi~  184 (256)
T 3gaf_A          178 VGPMGIR  184 (256)
T ss_dssp             HGGGTEE
T ss_pred             HhhhCcE
Confidence            9999885

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=9.2e-37  Score=218.00  Aligned_cols=162  Identities=24%  Similarity=0.365  Sum_probs=151.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++.+       ..++.++.+|++|+++++++++++.++++++|++|||
T Consensus        15 Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnn   94 (265)
T 3lf2_A           15 GGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCASILVNN   94 (265)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCSEEEEC
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            899999999999999999999999999887665432       2358899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      ||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|+++|+++++|+++++
T Consensus        95 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la  174 (265)
T 3lf2_A           95 AGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMA  174 (265)
T ss_dssp             CCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHHHHHHHHHHHHHHH
Confidence            99988889999999999999999999999999999999988888999999999999999999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       175 ~e~~~~gi~  183 (265)
T 3lf2_A          175 FEFAPKGVR  183 (265)
T ss_dssp             HHHGGGTEE
T ss_pred             HHhcccCeE
Confidence            999999985

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=6.7e-37  Score=217.29  Aligned_cols=161  Identities=20%  Similarity=0.262  Sum_probs=151.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++.+     ..++.++.+|++|+++++++++++.+. +++|++|||||
T Consensus        14 Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-g~id~lv~nAg   92 (252)
T 3h7a_A           14 GAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH-APLEVTIFNVG   92 (252)
T ss_dssp             CCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-SCEEEEEECCC
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-CCceEEEECCC
Confidence            899999999999999999999999999887766543     357899999999999999999999999 99999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||+++.+|+++++.|
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e  172 (252)
T 3h7a_A           93 ANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARE  172 (252)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHHHHHHHHHHHHHHH
Confidence            98888899999999999999999999999999999999888899999999999999999999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      ++++|||
T Consensus       173 ~~~~gi~  179 (252)
T 3h7a_A          173 LMPKNIH  179 (252)
T ss_dssp             HGGGTEE
T ss_pred             hhhcCCE
Confidence            9999885

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1e-36  Score=218.99  Aligned_cols=162  Identities=29%  Similarity=0.415  Sum_probs=153.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++.+  ...+.++.+|++|+++++++++++.+++|++|++|||||...
T Consensus        34 Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~  113 (277)
T 4dqx_A           34 GGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGT  113 (277)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence            899999999999999999999999999887776654  367889999999999999999999999999999999999988


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ..++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||+++++|+++++.|+++
T Consensus       114 ~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~  193 (277)
T 4dqx_A          114 TGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAK  193 (277)
T ss_dssp             CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHHHHHHHHHHHHHHHHhhh
Confidence            88899999999999999999999999999999998888899999999999999999999999999999999999999999


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +|||
T Consensus       194 ~gi~  197 (277)
T 4dqx_A          194 EGIR  197 (277)
T ss_dssp             GTEE
T ss_pred             cCeE
Confidence            9885

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.6e-36  Score=217.98  Aligned_cols=162  Identities=26%  Similarity=0.362  Sum_probs=153.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++..  ...+.++.+|++|+++++++++++.++++++|++|||||...
T Consensus        36 Gas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~  115 (277)
T 3gvc_A           36 GAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVH  115 (277)
T ss_dssp             TTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            899999999999999999999999999887776544  357889999999999999999999999999999999999988


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ..++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|+++|+++++|+++++.|+++
T Consensus       116 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~  195 (277)
T 3gvc_A          116 LASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRS  195 (277)
T ss_dssp             CBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHHHHHHHHHHHHHHHhcc
Confidence            88899999999999999999999999999999999888899999999999999999999999999999999999999999


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +|||
T Consensus       196 ~gI~  199 (277)
T 3gvc_A          196 SGIR  199 (277)
T ss_dssp             GTEE
T ss_pred             cCeE
Confidence            9885

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=4.5e-37  Score=217.58  Aligned_cols=162  Identities=25%  Similarity=0.344  Sum_probs=152.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||+++|++|+++|++|++++|+.+.+++...  ..++.++.+|++|+++++++++++.+++|++|++|||||...
T Consensus        13 Gas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~   92 (247)
T 3rwb_A           13 GAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDILVNNASIVP   92 (247)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCC
Confidence            899999999999999999999999999887776544  467889999999999999999999999999999999999988


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                      ..++.+.+.++|++.+++|+.+++.++++++|.|++++ .++||++||..+..+.++...|+++|+++++|+++++.|++
T Consensus        93 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~  172 (247)
T 3rwb_A           93 FVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELG  172 (247)
T ss_dssp             CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHHHHHHHHHHHHHHHhh
Confidence            88899999999999999999999999999999998776 79999999999999999999999999999999999999999


Q ss_pred             cCCCC
Q 042185          158 HFGID  162 (162)
Q Consensus       158 ~~gi~  162 (162)
                      ++|||
T Consensus       173 ~~gi~  177 (247)
T 3rwb_A          173 KYNIT  177 (247)
T ss_dssp             GGTEE
T ss_pred             hcCeE
Confidence            99885

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=4.9e-37  Score=215.95  Aligned_cols=161  Identities=20%  Similarity=0.253  Sum_probs=144.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC--CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||+++|++|+++|++|++++|+.+.+++..++  ..+.++.+|++|+++++++++++.++++++|++|||||...
T Consensus        10 Gas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~   89 (235)
T 3l6e_A           10 GAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGE   89 (235)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEEEECCCC-
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCC
Confidence            8999999999999999999999999998877765432  36889999999999999999999999999999999999987


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ..++.+.+.++|++.+++|+.+++.++++++|.|++++ ++||++||..+..+.+....|++||+++++|+++++.|+++
T Consensus        90 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~  168 (235)
T 3l6e_A           90 FGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKD  168 (235)
T ss_dssp             -----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             CCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHhhc
Confidence            78888999999999999999999999999999997655 59999999999999999999999999999999999999999


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +|||
T Consensus       169 ~gi~  172 (235)
T 3l6e_A          169 SPLR  172 (235)
T ss_dssp             SSEE
T ss_pred             cCCE
Confidence            9885

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=1.6e-36  Score=215.99  Aligned_cols=162  Identities=27%  Similarity=0.308  Sum_probs=151.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEE-ecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVAT-GRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~-~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|+++ +|+.+..++..+     ..++.++.+|++|+++++++++++.++++++|++||||
T Consensus        11 Gas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nA   90 (258)
T 3oid_A           11 GSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNA   90 (258)
T ss_dssp             SCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             cCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            899999999999999999999886 888776665433     35788999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||+++++|+++++.
T Consensus        91 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~  170 (258)
T 3oid_A           91 ASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAV  170 (258)
T ss_dssp             CCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            98878889999999999999999999999999999999988889999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       171 e~~~~gi~  178 (258)
T 3oid_A          171 ELSPKQII  178 (258)
T ss_dssp             HTGGGTEE
T ss_pred             HHhhcCcE
Confidence            99999885

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=1.6e-36  Score=219.55  Aligned_cols=162  Identities=27%  Similarity=0.372  Sum_probs=151.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC------CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|++++|+.+.+++..++      .++.++.+|++|+++++++++++.++++++|++||||
T Consensus        48 Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnA  127 (293)
T 3rih_A           48 GGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANA  127 (293)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            8999999999999999999999999998876655331      4788999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccccc-CCCCCchhhhHhHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVA-APGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      |.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+. .+.++...|++||+++++|+++++
T Consensus       128 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la  207 (293)
T 3rih_A          128 GIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAA  207 (293)
T ss_dssp             CCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9988888999999999999999999999999999999998888999999999986 888899999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       208 ~e~~~~gI~  216 (293)
T 3rih_A          208 IELAPRGVT  216 (293)
T ss_dssp             HHHGGGTCE
T ss_pred             HHHhhhCeE
Confidence            999999986

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=2.3e-36  Score=217.53  Aligned_cols=162  Identities=24%  Similarity=0.386  Sum_probs=149.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecC------------hhhHHhhh-----cCCceeEEEeccCChHHHHHHHHHHHHH
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRS------------KATMADLE-----QDPRFFVQELDVLSEQSVQNVLSNVLEK   63 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~------------~~~~~~~~-----~~~~~~~~~~D~~~~~~i~~~~~~~~~~   63 (162)
                      ||++|||+++|++|+++|++|++++|+            .+.+++..     ...++.++.+|++|+++++++++++.++
T Consensus        17 Gas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   96 (281)
T 3s55_A           17 GGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFVAEAEDT   96 (281)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence            899999999999999999999999997            33333322     1467889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHH
Q 042185           64 FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKA  143 (162)
Q Consensus        64 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKa  143 (162)
                      +|++|++|||||+....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|+++|+
T Consensus        97 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  176 (281)
T 3s55_A           97 LGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKW  176 (281)
T ss_dssp             HTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCTTCHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCCCCchhHHHHH
Confidence            99999999999998888899999999999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCCC
Q 042185          144 ALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       144 a~~~l~~~l~~e~~~~gi~  162 (162)
                      ++++|+++++.|++++|||
T Consensus       177 a~~~~~~~la~e~~~~gi~  195 (281)
T 3s55_A          177 GVIGLTKCAAHDLVGYGIT  195 (281)
T ss_dssp             HHHHHHHHHHHHTGGGTEE
T ss_pred             HHHHHHHHHHHHHhhcCcE
Confidence            9999999999999999885

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=8.5e-37  Score=218.82  Aligned_cols=162  Identities=27%  Similarity=0.415  Sum_probs=152.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||+++|++|+++|++|++++|+.+.+++..+     ..++.++.+|++|+++++++++++.++++++|++|||||
T Consensus        33 Gas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg  112 (271)
T 4ibo_A           33 GSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVDILVNNAG  112 (271)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCCEEEECCC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCC
Confidence            899999999999999999999999999887665533     357889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      +....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|+++|+++++|+++++.|
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e  192 (271)
T 4ibo_A          113 IQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAE  192 (271)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHHHHHHHHHHHHHHHH
Confidence            98888899999999999999999999999999999999888899999999999999999999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      ++++|||
T Consensus       193 ~~~~gI~  199 (271)
T 4ibo_A          193 WAQYGIQ  199 (271)
T ss_dssp             HGGGTEE
T ss_pred             HhhhCeE
Confidence            9999885

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=2.5e-36  Score=215.11  Aligned_cols=162  Identities=29%  Similarity=0.409  Sum_probs=152.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||+++|++|+++|++|++++|+.+.+++...  .....++.+|++|+++++++++++.+++|++|++|||||...
T Consensus        15 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~   94 (259)
T 4e6p_A           15 GSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFD   94 (259)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEEEECCCCCC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence            899999999999999999999999999887776644  356889999999999999999999999999999999999988


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                      ..++.+.+.++|++.+++|+.+++.+++++.|.|.+++ +|+||++||..+..+.++...|+++|+++++|++.++.|++
T Consensus        95 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~  174 (259)
T 4e6p_A           95 LAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLI  174 (259)
T ss_dssp             CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHHHHHHHHHHHHHHHhh
Confidence            88899999999999999999999999999999998765 78999999999999999999999999999999999999999


Q ss_pred             cCCCC
Q 042185          158 HFGID  162 (162)
Q Consensus       158 ~~gi~  162 (162)
                      ++|||
T Consensus       175 ~~gi~  179 (259)
T 4e6p_A          175 KHRIN  179 (259)
T ss_dssp             GGTEE
T ss_pred             hcCCE
Confidence            99875

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.4e-36  Score=217.68  Aligned_cols=162  Identities=28%  Similarity=0.379  Sum_probs=152.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++..     ...+.++.+|++|.++++++++++.++++++|++|||||
T Consensus        35 Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg  114 (270)
T 3ftp_A           35 GASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAG  114 (270)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            899999999999999999999999999877665433     357889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      +....++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|+++|+++++|+++++.|
T Consensus       115 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e  194 (270)
T 3ftp_A          115 ITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALARE  194 (270)
T ss_dssp             CCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHHHHHHHHHHHHHHHHH
Confidence            98888889999999999999999999999999999998888899999999999999999999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      ++++|||
T Consensus       195 ~~~~gI~  201 (270)
T 3ftp_A          195 IGSRGIT  201 (270)
T ss_dssp             HGGGTEE
T ss_pred             HhhhCeE
Confidence            9999875

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.1e-36  Score=218.00  Aligned_cols=162  Identities=31%  Similarity=0.472  Sum_probs=150.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++.+     ...+.++.+|++|+++++++++++.+++|++|++|||||
T Consensus        35 Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg  114 (283)
T 3v8b_A           35 GAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHLDIVVANAG  114 (283)
T ss_dssp             SCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence            899999999999999999999999999887766543     357889999999999999999999999999999999999


Q ss_pred             CCCC-CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC--CCCCchhhhHhHHHHHHHHHHH
Q 042185           76 VQCV-GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA--PGPWAGTYTASKAALHSLTDTL  152 (162)
Q Consensus        76 ~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~~y~~sKaa~~~l~~~l  152 (162)
                      +... .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..  +.++...|+++|+++++|++++
T Consensus       115 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y~asKaa~~~l~~~l  194 (283)
T 3v8b_A          115 INGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQL  194 (283)
T ss_dssp             CCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHHHHHHHHHHHHHHHH
Confidence            8643 788999999999999999999999999999999988889999999999887  7788999999999999999999


Q ss_pred             HHHhccCCCC
Q 042185          153 RLELGHFGID  162 (162)
Q Consensus       153 ~~e~~~~gi~  162 (162)
                      +.|++++|||
T Consensus       195 a~e~~~~gI~  204 (283)
T 3v8b_A          195 ALELGKHHIR  204 (283)
T ss_dssp             HHHTTTTTEE
T ss_pred             HHHhCccCcE
Confidence            9999999885

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.9e-36  Score=216.43  Aligned_cols=162  Identities=33%  Similarity=0.445  Sum_probs=151.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|++++|+.+.+++..+      ..++.++.+|++|+++++++++++.++++++|++||||
T Consensus        27 Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nA  106 (266)
T 4egf_A           27 GATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNA  106 (266)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCSEEEEEC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            899999999999999999999999999877665432      46789999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      |.....++.+.+.++|++.+++|+.+++.+++++.|.|++++ +|+||++||..+..+.++...|+++|+++++|+++++
T Consensus       107 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la  186 (266)
T 4egf_A          107 GISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLA  186 (266)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHHHHHHHHHHHHHHH
Confidence            998888899999999999999999999999999999998765 6899999999999999999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       187 ~e~~~~gI~  195 (266)
T 4egf_A          187 RELGPHGIR  195 (266)
T ss_dssp             HHHGGGTEE
T ss_pred             HHHhhhCeE
Confidence            999999885

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=2.1e-36  Score=216.83  Aligned_cols=162  Identities=30%  Similarity=0.491  Sum_probs=151.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||+++|++|+++|++|++++|+.+.+++...  ..++.++.+|++|+++++++++++.+++|++|++|||||...
T Consensus        35 Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~  114 (272)
T 4dyv_A           35 GAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGA  114 (272)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            899999999999999999999999999888776654  367889999999999999999999999999999999999864


Q ss_pred             C-CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC--CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           79 V-GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK--KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        79 ~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      . .++.+.+.++|++.+++|+.+++.++++++|.|++++  .|+||++||..+..+.++...|+++|+++++|+++++.|
T Consensus       115 ~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e  194 (272)
T 4dyv_A          115 PAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLD  194 (272)
T ss_dssp             CSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence            4 6888999999999999999999999999999998765  689999999999999999999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      ++++|||
T Consensus       195 ~~~~gI~  201 (272)
T 4dyv_A          195 GRVHDIA  201 (272)
T ss_dssp             HGGGTEE
T ss_pred             hCccCEE
Confidence            9999885

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=6.1e-36  Score=211.76  Aligned_cols=161  Identities=30%  Similarity=0.512  Sum_probs=150.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||++++++|+++|++|++++|+.+.++++.+     ..++.++.+|++|+++++.+++++.++++++|++|||||
T Consensus        14 Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~nAg   93 (247)
T 2jah_A           14 GASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAG   93 (247)
T ss_dssp             SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            899999999999999999999999999877665432     357889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....++.+.+.++|++.+++|+.+++.++++++|.|++++ |+||++||..+..+.++...|+++|+++.+|+++++.|
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e  172 (247)
T 2jah_A           94 IMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQE  172 (247)
T ss_dssp             CCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            88778888999999999999999999999999999998776 99999999999999999999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      ++++|||
T Consensus       173 ~~~~gi~  179 (247)
T 2jah_A          173 VTERGVR  179 (247)
T ss_dssp             HGGGTCE
T ss_pred             hcccCcE
Confidence            9999985

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=3.7e-36  Score=213.97  Aligned_cols=162  Identities=29%  Similarity=0.457  Sum_probs=150.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++..     ..++.++.+|++|+++++++++++.+++|++|++|||||
T Consensus        13 Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg   92 (257)
T 3imf_A           13 GGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAA   92 (257)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            899999999999999999999999999887766543     257889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhh-cCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY-RKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      .....++.+.+.++|++.+++|+.+++.++++++|.|.+ ++.|+||++||..+..+.++...|++||+++++|+++++.
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~  172 (257)
T 3imf_A           93 GNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAV  172 (257)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            887888999999999999999999999999999999954 4579999999999999999999999999999999999999


Q ss_pred             Hhc-cCCCC
Q 042185          155 ELG-HFGID  162 (162)
Q Consensus       155 e~~-~~gi~  162 (162)
                      |++ ++|||
T Consensus       173 e~~~~~gIr  181 (257)
T 3imf_A          173 EWGRKYGIR  181 (257)
T ss_dssp             HHHHHHCCE
T ss_pred             HhccccCeE
Confidence            998 77875

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=1.6e-36  Score=216.90  Aligned_cols=162  Identities=25%  Similarity=0.398  Sum_probs=142.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++.+  ...+.++.+|++|+++++++++++.++++++|++|||||...
T Consensus        34 Gas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~  113 (266)
T 3grp_A           34 GATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITR  113 (266)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEEEECCCCC-
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            899999999999999999999999999888776644  367889999999999999999999999999999999999987


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ..++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|+++|+++++|+++++.|+++
T Consensus       114 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~  193 (266)
T 3grp_A          114 DGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIAS  193 (266)
T ss_dssp             ----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHHHHHHHHHHHHHHHHhhh
Confidence            78888999999999999999999999999999999888899999999999999999999999999999999999999999


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +|||
T Consensus       194 ~gI~  197 (266)
T 3grp_A          194 RNIT  197 (266)
T ss_dssp             GTEE
T ss_pred             hCcE
Confidence            9885

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=3e-36  Score=215.20  Aligned_cols=160  Identities=33%  Similarity=0.531  Sum_probs=149.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++.+     ...+.++.+|++|+++++++++++.+++|++|++|||||
T Consensus        11 Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG   90 (264)
T 3tfo_A           11 GASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAG   90 (264)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             CCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            899999999999999999999999999887766543     357889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||+++.+|+++++.|
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e  170 (264)
T 3tfo_A           91 VMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE  170 (264)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHHHHHHHHHHHHh
Confidence            98888899999999999999999999999999999999888899999999999999999999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      + + |||
T Consensus       171 ~-~-gIr  175 (264)
T 3tfo_A          171 S-T-NIR  175 (264)
T ss_dssp             C-S-SEE
T ss_pred             C-C-CCE
Confidence            8 4 764

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=3e-36  Score=217.01  Aligned_cols=162  Identities=27%  Similarity=0.484  Sum_probs=150.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEec-ChhhHHhhhc------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGR-SKATMADLEQ------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r-~~~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||++|||+++|++|+++|++|++++| +.+.+++..+      ...+.++.+|++|+++++++++++.+++|++|++|||
T Consensus        32 Gas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~n  111 (281)
T 3v2h_A           32 GSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGADILVNN  111 (281)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSSCSEEEEC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCCCCEEEEC
Confidence            89999999999999999999999999 5454444322      3578899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      ||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.+....|+++|+++++|+++++
T Consensus       112 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la  191 (281)
T 3v2h_A          112 AGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVA  191 (281)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHHHHHHHHHHHHHHHH
Confidence            99988888999999999999999999999999999999998888999999999999999999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       192 ~e~~~~gI~  200 (281)
T 3v2h_A          192 LEVAESGVT  200 (281)
T ss_dssp             HHHGGGTEE
T ss_pred             HHhhhcCcE
Confidence            999999875

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=3.7e-36  Score=216.40  Aligned_cols=162  Identities=30%  Similarity=0.472  Sum_probs=149.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEec-------------ChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHH
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGR-------------SKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLE   62 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r-------------~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~   62 (162)
                      ||++|||+++|++|+++|++|++++|             +.+.++++..     ..++.++.+|++|+++++++++++.+
T Consensus        22 Gas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  101 (280)
T 3pgx_A           22 GAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRELVADGME  101 (280)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            89999999999999999999999998             4555544322     35788999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHh
Q 042185           63 KFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTAS  141 (162)
Q Consensus        63 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~s  141 (162)
                      +++++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++ +|+||++||..+..+.++...|+++
T Consensus       102 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  181 (280)
T 3pgx_A          102 QFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSAS  181 (280)
T ss_dssp             HHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCCCCchhHHHH
Confidence            999999999999998888899999999999999999999999999999998765 7899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCCC
Q 042185          142 KAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       142 Kaa~~~l~~~l~~e~~~~gi~  162 (162)
                      |+++++|+++++.|++++|||
T Consensus       182 Kaa~~~~~~~la~e~~~~gi~  202 (280)
T 3pgx_A          182 KHGLTALTNTLAIELGEYGIR  202 (280)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEE
T ss_pred             HHHHHHHHHHHHHHhhhcCeE
Confidence            999999999999999999885

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=1.4e-36  Score=215.48  Aligned_cols=161  Identities=28%  Similarity=0.418  Sum_probs=143.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-------C-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-------D-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-------~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      ||++|||+++|++|+++|++|++++|+.+.+++..+       . ..+.++.+|++|+++++++++++.++++++|++||
T Consensus        14 Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   93 (250)
T 3nyw_A           14 GASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGAVDILVN   93 (250)
T ss_dssp             STTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            899999999999999999999999999887665533       2 67889999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHH
Q 042185           73 NAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTL  152 (162)
Q Consensus        73 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l  152 (162)
                      |||.....++ +.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|+++|+++.+|++++
T Consensus        94 nAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~l  172 (250)
T 3nyw_A           94 AAAMFMDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESL  172 (250)
T ss_dssp             CCCCCCCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchHHHHHHHHHHHHHH
Confidence            9999877777 789999999999999999999999999999888899999999999997777999999999999999999


Q ss_pred             HHHhccCCCC
Q 042185          153 RLELGHFGID  162 (162)
Q Consensus       153 ~~e~~~~gi~  162 (162)
                      +.|++++|||
T Consensus       173 a~e~~~~gi~  182 (250)
T 3nyw_A          173 YRELAPLGIR  182 (250)
T ss_dssp             HHHHGGGTEE
T ss_pred             HHHhhhcCcE
Confidence            9999999885

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=5.3e-36  Score=215.26  Aligned_cols=162  Identities=25%  Similarity=0.358  Sum_probs=149.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEec-------------ChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHH
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGR-------------SKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLE   62 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r-------------~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~   62 (162)
                      ||++|||+++|++|+++|++|++++|             +.+.+++...     ..++.++.+|++|+++++++++++.+
T Consensus        18 Gas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   97 (277)
T 3tsc_A           18 GAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKVVDDGVA   97 (277)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            89999999999999999999999998             4444444322     46788999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHh
Q 042185           63 KFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTAS  141 (162)
Q Consensus        63 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~s  141 (162)
                      +++++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+..+.++...|++|
T Consensus        98 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  177 (277)
T 3tsc_A           98 ALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTAS  177 (277)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCSSCHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCCCCchhhHHH
Confidence            999999999999998888889999999999999999999999999999998765 7899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCCC
Q 042185          142 KAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       142 Kaa~~~l~~~l~~e~~~~gi~  162 (162)
                      |+++++|+++++.|++++|||
T Consensus       178 Kaa~~~~~~~la~e~~~~gi~  198 (277)
T 3tsc_A          178 KHAVTGLARAFAAELGKHSIR  198 (277)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEE
T ss_pred             HHHHHHHHHHHHHHhCccCeE
Confidence            999999999999999999885

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=3.8e-36  Score=212.67  Aligned_cols=162  Identities=28%  Similarity=0.414  Sum_probs=149.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecC-hhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRS-KATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~-~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|++++++ .+..+++.+     ..++.++.+|++|.++++++++++.++++++|++||||
T Consensus        11 Gas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nA   90 (246)
T 3osu_A           11 GASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNA   90 (246)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            899999999999999999999988874 444444322     35788999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|+++|+++++|+++++.
T Consensus        91 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~  170 (246)
T 3osu_A           91 GITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAAR  170 (246)
T ss_dssp             CCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHHHHHHHHHH
Confidence            99888889999999999999999999999999999999888889999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       171 e~~~~gi~  178 (246)
T 3osu_A          171 ELASRGIT  178 (246)
T ss_dssp             HHGGGTEE
T ss_pred             HhcccCeE
Confidence            99999885

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=5.3e-36  Score=215.51  Aligned_cols=162  Identities=28%  Similarity=0.377  Sum_probs=151.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||+++|++|+++|++|++++|+.+.+++..+     ...+.++.+|++|.++++++++++.+++|++|++|||||
T Consensus        31 Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg  110 (279)
T 3sju_A           31 GVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAG  110 (279)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCCEEEECCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCC
Confidence            899999999999999999999999999887665433     357889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHH--hHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVP--HMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      .....++.+.+.++|++.+++|+.+++.++++++|  .|++++.|+||++||..+..+.++...|+++|+++++|+++++
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la  190 (279)
T 3sju_A          111 RNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVG  190 (279)
T ss_dssp             CCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHHHHHHHHHHHHHH
Confidence            98888899999999999999999999999999999  6877778999999999999999999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       191 ~e~~~~gi~  199 (279)
T 3sju_A          191 FELAKTGIT  199 (279)
T ss_dssp             HHTGGGTEE
T ss_pred             HHHHhhCcE
Confidence            999999885

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=5.5e-36  Score=213.02  Aligned_cols=160  Identities=18%  Similarity=0.231  Sum_probs=144.4

Q ss_pred             CCCC--chHHHHHHHHHHCCCeEEEEecChhhHHhhhc------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            1 CSQG--GIGHALARAFAASDCRVVATGRSKATMADLEQ------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         1 Ga~~--giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      ||+|  |||+++|+.|+++|++|++++|+.+.++++.+      ..+..++++|++++++++++++++.+++|++|++||
T Consensus        13 Gaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD~lvn   92 (256)
T 4fs3_A           13 GIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYH   92 (256)
T ss_dssp             CCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEE
T ss_pred             CCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEe
Confidence            5554  99999999999999999999999876665432      247889999999999999999999999999999999


Q ss_pred             CCCCCCC----CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHH
Q 042185           73 NAGVQCV----GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSL  148 (162)
Q Consensus        73 ~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l  148 (162)
                      |+|+...    .++.+.+.++|+..+++|+.+++.+.+.+.+.++  ++|+||++||..+..+.+....|++||+|+.+|
T Consensus        93 nAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~--~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~l  170 (256)
T 4fs3_A           93 SIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMP--EGGSIVATTYLGGEFAVQNYNVMGVAKASLEAN  170 (256)
T ss_dssp             CCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCT--TCEEEEEEECGGGTSCCTTTHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCEEEEEeccccccCcccchhhHHHHHHHHHH
Confidence            9997643    4567889999999999999999999999998774  468999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCCC
Q 042185          149 TDTLRLELGHFGID  162 (162)
Q Consensus       149 ~~~l~~e~~~~gi~  162 (162)
                      +|+|+.|++++|||
T Consensus       171 tr~lA~Ela~~gIr  184 (256)
T 4fs3_A          171 VKYLALDLGPDNIR  184 (256)
T ss_dssp             HHHHHHHHGGGTEE
T ss_pred             HHHHHHHhCccCeE
Confidence            99999999999986

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=8.9e-36  Score=212.78  Aligned_cols=161  Identities=28%  Similarity=0.487  Sum_probs=150.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++.+     ..++.++.+|++|+++++++++++.++++++|++|||||
T Consensus        18 Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg   97 (264)
T 3ucx_A           18 GVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAF   97 (264)
T ss_dssp             SCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECCC
T ss_pred             CCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCC
Confidence            899999999999999999999999999887766543     357889999999999999999999999999999999999


Q ss_pred             CC-CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           76 VQ-CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        76 ~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      .. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ |+||++||..+..+.+....|+++|+++++|+++++.
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~  176 (264)
T 3ucx_A           98 RVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLAT  176 (264)
T ss_dssp             SCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHHHHHHHHHHHHHHHHHH
Confidence            85 567888999999999999999999999999999997765 9999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       177 e~~~~gi~  184 (264)
T 3ucx_A          177 ELGEKGIR  184 (264)
T ss_dssp             HHHTTTCE
T ss_pred             HhCccCeE
Confidence            99999986

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=2.1e-36  Score=217.75  Aligned_cols=162  Identities=23%  Similarity=0.381  Sum_probs=150.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC--------CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD--------PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~--------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      ||++|||+++|++|+++|++|++++|+.+.+++..++        ..+.++.+|++|+++++++++++.+++|++|++||
T Consensus        18 Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~   97 (281)
T 3svt_A           18 GGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVH   97 (281)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            8999999999999999999999999998776654331        27889999999999999999999999999999999


Q ss_pred             CCCC-CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHH
Q 042185           73 NAGV-QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDT  151 (162)
Q Consensus        73 ~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~  151 (162)
                      |||. ....++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|++||+++++|+++
T Consensus        98 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~  177 (281)
T 3svt_A           98 CAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQL  177 (281)
T ss_dssp             CCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChhHHHHHHHHHHHHHH
Confidence            9997 556788899999999999999999999999999999988889999999999999999999999999999999999


Q ss_pred             HHHHhccCCCC
Q 042185          152 LRLELGHFGID  162 (162)
Q Consensus       152 l~~e~~~~gi~  162 (162)
                      ++.|++++|||
T Consensus       178 la~e~~~~gi~  188 (281)
T 3svt_A          178 AADELGASWVR  188 (281)
T ss_dssp             HHHHHGGGTEE
T ss_pred             HHHHhhhcCeE
Confidence            99999999875

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=2.5e-36  Score=214.67  Aligned_cols=160  Identities=29%  Similarity=0.402  Sum_probs=150.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC--CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++.++  .++.++.+|++|+++++.+++++.++++++|++|||||...
T Consensus        15 Gas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~   94 (255)
T 4eso_A           15 GGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSE   94 (255)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence            8999999999999999999999999999887776543  57889999999999999999999999999999999999988


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ..++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.++...|+++|+++++|+++++.|+++
T Consensus        95 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~  172 (255)
T 4eso_A           95 LEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE--GGSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLP  172 (255)
T ss_dssp             CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCGGGSSBCTTBHHHHHHHHHHHHHHHHHHHHTGG
T ss_pred             CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--CCEEEEECChhhcCCCCCchHHHHHHHHHHHHHHHHHHHHhh
Confidence            888999999999999999999999999999999854  489999999999999999999999999999999999999999


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +|||
T Consensus       173 ~gi~  176 (255)
T 4eso_A          173 RGIR  176 (255)
T ss_dssp             GTCE
T ss_pred             hCcE
Confidence            9986

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=5.5e-36  Score=214.42  Aligned_cols=162  Identities=30%  Similarity=0.413  Sum_probs=149.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEec-ChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGR-SKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r-~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|++++| +.+..+++.+     ...+.++.+|++|+++++++++++.+++|++|++||||
T Consensus        35 Gas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id~lv~nA  114 (269)
T 4dmm_A           35 GASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNA  114 (269)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            89999999999999999999999988 5544444322     35788999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|+++|+++++|+++++.
T Consensus       115 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~  194 (269)
T 4dmm_A          115 GITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAK  194 (269)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHHHHHHHHHHHHHHHH
Confidence            99888888899999999999999999999999999999988889999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       195 e~~~~gi~  202 (269)
T 4dmm_A          195 ELASRGIT  202 (269)
T ss_dssp             HHGGGTCE
T ss_pred             HHhhhCcE
Confidence            99999985

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.8e-36  Score=216.45  Aligned_cols=162  Identities=29%  Similarity=0.408  Sum_probs=149.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC------CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|++++|+.+.+++..++      ..+.++.+|++|+++++++++++.+++|++|++||||
T Consensus        40 Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnA  119 (281)
T 4dry_A           40 GGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNA  119 (281)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            8999999999999999999999999998876665432      2358999999999999999999999999999999999


Q ss_pred             CCCCC-CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC--CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHH
Q 042185           75 GVQCV-GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK--KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDT  151 (162)
Q Consensus        75 g~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~  151 (162)
                      |.... .++.+.+.++|++.+++|+.+++.++++++|.|++++  .|+||++||..+..+.++...|+++|+++++|+++
T Consensus       120 G~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~  199 (281)
T 4dry_A          120 GSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKS  199 (281)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHHHHHHHHHHHHHH
Confidence            98644 6888999999999999999999999999999998765  68999999999999999999999999999999999


Q ss_pred             HHHHhccCCCC
Q 042185          152 LRLELGHFGID  162 (162)
Q Consensus       152 l~~e~~~~gi~  162 (162)
                      ++.|++++|||
T Consensus       200 la~e~~~~gI~  210 (281)
T 4dry_A          200 TALDGRMHDIA  210 (281)
T ss_dssp             HHHHHGGGTEE
T ss_pred             HHHHhcccCeE
Confidence            99999999885

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=6.2e-36  Score=214.35  Aligned_cols=162  Identities=25%  Similarity=0.398  Sum_probs=150.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||+++|++|+++|++|++++|+.+.+++...  ...+.++.+|++|+++++++++++.+++|++|++|||||...
T Consensus        18 Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~   97 (271)
T 3tzq_B           18 GACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSD   97 (271)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            899999999999999999999999999877666543  357889999999999999999999999999999999999862


Q ss_pred             --CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHh
Q 042185           79 --VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus        79 --~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                        ..++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|++||+++++|+++++.|+
T Consensus        98 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~  177 (271)
T 3tzq_B           98 PADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQY  177 (271)
T ss_dssp             TTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Confidence              456778999999999999999999999999999998888999999999999999999999999999999999999999


Q ss_pred             ccCCCC
Q 042185          157 GHFGID  162 (162)
Q Consensus       157 ~~~gi~  162 (162)
                      +++|||
T Consensus       178 ~~~gi~  183 (271)
T 3tzq_B          178 GRHGVR  183 (271)
T ss_dssp             GGGTEE
T ss_pred             hhcCEE
Confidence            999885

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=2e-36  Score=217.53  Aligned_cols=162  Identities=22%  Similarity=0.354  Sum_probs=151.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|++++|+.+..++...      ..++.++.+|++|+++++++++++.++++++|++||||
T Consensus        34 Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nA  113 (277)
T 4fc7_A           34 GGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCA  113 (277)
T ss_dssp             TTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            899999999999999999999999999876655432      46789999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.+....|+++|+++++|+++++.
T Consensus       114 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~  193 (277)
T 4fc7_A          114 AGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAV  193 (277)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            98877888999999999999999999999999999999887789999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       194 e~~~~gi~  201 (277)
T 4fc7_A          194 EWGPQNIR  201 (277)
T ss_dssp             HHGGGTEE
T ss_pred             HhhhcCeE
Confidence            99999885

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-35  Score=212.37  Aligned_cols=162  Identities=24%  Similarity=0.344  Sum_probs=150.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||++|||+++|++|+++|++|++++|+.+.+++..+       ..++.++.+|++|+++++++++++.++++++|++|||
T Consensus        20 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~n   99 (267)
T 1iy8_A           20 GGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNN   99 (267)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEEC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            899999999999999999999999999876655432       4568899999999999999999999999999999999


Q ss_pred             CCCCCC-CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHH
Q 042185           74 AGVQCV-GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTL  152 (162)
Q Consensus        74 ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l  152 (162)
                      ||.... .++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|+++++|++++
T Consensus       100 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l  179 (267)
T 1iy8_A          100 AGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNS  179 (267)
T ss_dssp             CCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHHHHHHHHHHH
T ss_pred             CCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHHHHHHHHHHHHHHH
Confidence            998765 6788899999999999999999999999999998888899999999999999999999999999999999999


Q ss_pred             HHHhccCCCC
Q 042185          153 RLELGHFGID  162 (162)
Q Consensus       153 ~~e~~~~gi~  162 (162)
                      +.|++++|||
T Consensus       180 a~e~~~~gi~  189 (267)
T 1iy8_A          180 AVEYGRYGIR  189 (267)
T ss_dssp             HHHHGGGTCE
T ss_pred             HHHHHhcCeE
Confidence            9999999985

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=4.2e-36  Score=212.73  Aligned_cols=162  Identities=28%  Similarity=0.498  Sum_probs=150.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC-
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ-   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~-   77 (162)
                      ||++|||++++++|+++|++|++++|+.+.++++.+  ...+.++.+|++|+++++++++++.++++++|++|||||.. 
T Consensus         7 Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~   86 (248)
T 3asu_A            7 GATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLAL   86 (248)
T ss_dssp             TTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEECCCCCC
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCC
Confidence            899999999999999999999999999887766544  24688999999999999999999999999999999999986 


Q ss_pred             CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhc
Q 042185           78 CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                      ...++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|+++|+++++|+++++.|++
T Consensus        87 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~  166 (248)
T 3asu_A           87 GMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLH  166 (248)
T ss_dssp             CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence            35678889999999999999999999999999999887789999999999999999999999999999999999999999


Q ss_pred             cCCCC
Q 042185          158 HFGID  162 (162)
Q Consensus       158 ~~gi~  162 (162)
                      ++|||
T Consensus       167 ~~gi~  171 (248)
T 3asu_A          167 GTAVR  171 (248)
T ss_dssp             TSCCE
T ss_pred             hcCcE
Confidence            99986

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=9e-36  Score=214.92  Aligned_cols=162  Identities=26%  Similarity=0.392  Sum_probs=147.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecC----------------hhhHHhhhc-----CCceeEEEeccCChHHHHHHHHH
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRS----------------KATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSN   59 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~----------------~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~   59 (162)
                      ||++|||+++|++|+++|++|++++|+                .+.+++..+     ..++.++.+|++|++++++++++
T Consensus        18 Gas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   97 (286)
T 3uve_A           18 GAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVDS   97 (286)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHH
Confidence            899999999999999999999999987                444444322     35788999999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCC-CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchh
Q 042185           60 VLEKFGKIDVLVNNAGVQCVG-PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGT  137 (162)
Q Consensus        60 ~~~~~~~id~vi~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~  137 (162)
                      +.+++|++|++|||||+.... ++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+..+.++...
T Consensus        98 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  177 (286)
T 3uve_A           98 GVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGH  177 (286)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHH
T ss_pred             HHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhccCCCCccH
Confidence            999999999999999987655 488899999999999999999999999999998765 789999999999999999999


Q ss_pred             hhHhHHHHHHHHHHHHHHhccCCCC
Q 042185          138 YTASKAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       138 y~~sKaa~~~l~~~l~~e~~~~gi~  162 (162)
                      |+++|+++++|+++++.|++++|||
T Consensus       178 Y~asKaa~~~~~~~la~e~~~~gI~  202 (286)
T 3uve_A          178 YVAAKHGVVGLMRAFGVELGQHMIR  202 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeE
Confidence            9999999999999999999999885

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.2e-36  Score=217.44  Aligned_cols=162  Identities=28%  Similarity=0.484  Sum_probs=151.3

Q ss_pred             CCCCchHHHHHHHHHHCCC---eEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEE
Q 042185            1 CSQGGIGHALARAFAASDC---RVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVL   70 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~---~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~v   70 (162)
                      ||++|||+++|++|+++|+   +|++++|+.+.++++.+       ..++.++.+|++|+++++++++++.+++|++|++
T Consensus        40 Gas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  119 (287)
T 3rku_A           40 GASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDIL  119 (287)
T ss_dssp             STTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGGGCSCCEE
T ss_pred             cCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            8999999999999999988   99999999887766543       3578899999999999999999999999999999


Q ss_pred             EECCCCCC-CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHH
Q 042185           71 VNNAGVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLT  149 (162)
Q Consensus        71 i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~  149 (162)
                      |||||... ..++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|+++|+++++|+
T Consensus       120 VnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~  199 (287)
T 3rku_A          120 VNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFT  199 (287)
T ss_dssp             EECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred             EECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCchHHHHHHHHHHHH
Confidence            99999864 57788999999999999999999999999999999888899999999999999999999999999999999


Q ss_pred             HHHHHHhccCCCC
Q 042185          150 DTLRLELGHFGID  162 (162)
Q Consensus       150 ~~l~~e~~~~gi~  162 (162)
                      ++++.|++++|||
T Consensus       200 ~~la~e~~~~gIr  212 (287)
T 3rku_A          200 DSLRKELINTKIR  212 (287)
T ss_dssp             HHHHHHTTTSSCE
T ss_pred             HHHHHHhhhcCCE
Confidence            9999999999986

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-35  Score=210.23  Aligned_cols=161  Identities=27%  Similarity=0.348  Sum_probs=150.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||++|||++++++|+++|++|++++|+.+.+++..++..+.++.+|++|+++++++++++.++++++|++|||||.....
T Consensus        12 Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn~Ag~~~~~   91 (245)
T 1uls_A           12 GAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDN   91 (245)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence            89999999999999999999999999988877766554578899999999999999999999999999999999987777


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccCC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG  160 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~g  160 (162)
                      ++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||.. ..+.++...|+++|+++.+|+++++.|++++|
T Consensus        92 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~g  170 (245)
T 1uls_A           92 FHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAGVVGLTRTLALELGRWG  170 (245)
T ss_dssp             CGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHHHHHHHHHHHHHHHhHhC
Confidence            88889999999999999999999999999999887789999999998 88888899999999999999999999999998


Q ss_pred             CC
Q 042185          161 ID  162 (162)
Q Consensus       161 i~  162 (162)
                      ||
T Consensus       171 i~  172 (245)
T 1uls_A          171 IR  172 (245)
T ss_dssp             EE
T ss_pred             eE
Confidence            75

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=8.8e-36  Score=214.96  Aligned_cols=162  Identities=25%  Similarity=0.340  Sum_probs=148.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhh-------HHhhh-----cCCceeEEEeccCChHHHHHHHHHHHHHcCCcc
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKAT-------MADLE-----QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKID   68 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~-------~~~~~-----~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id   68 (162)
                      ||++|||+++|++|+++|++|++++|+.+.       +++..     ...++.++.+|++|+++++++++++.++++++|
T Consensus        16 Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   95 (285)
T 3sc4_A           16 GGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVEQFGGID   95 (285)
T ss_dssp             SCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            899999999999999999999999998763       22211     146789999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC-CCchhhhHhHHHHHH
Q 042185           69 VLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG-PWAGTYTASKAALHS  147 (162)
Q Consensus        69 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-~~~~~y~~sKaa~~~  147 (162)
                      ++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+. +....|++||+++++
T Consensus        96 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaal~~  175 (285)
T 3sc4_A           96 ICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTL  175 (285)
T ss_dssp             EEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSCSHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCCCchHHHHHHHHHH
Confidence            9999999988888999999999999999999999999999999988888999999999988875 778999999999999


Q ss_pred             HHHHHHHHhccCCCC
Q 042185          148 LTDTLRLELGHFGID  162 (162)
Q Consensus       148 l~~~l~~e~~~~gi~  162 (162)
                      |+++++.|++++|||
T Consensus       176 ~~~~la~e~~~~gI~  190 (285)
T 3sc4_A          176 CALGIAEELRDAGIA  190 (285)
T ss_dssp             HHHHHHHHTGGGTCE
T ss_pred             HHHHHHHHhcccCcE
Confidence            999999999999986

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=1.6e-35  Score=210.23  Aligned_cols=161  Identities=21%  Similarity=0.291  Sum_probs=148.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc------CCceeEEEecc--CChHHHHHHHHHHHHHcCCccEEEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ------DPRFFVQELDV--LSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~------~~~~~~~~~D~--~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      ||++|||+++|++|+++|++|++++|+.+.+++..+      .....++.+|+  ++.++++++++++.++++++|++||
T Consensus        19 Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~   98 (252)
T 3f1l_A           19 GASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLH   98 (252)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHCSCCSEEEE
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            899999999999999999999999999887766543      23788999999  9999999999999999999999999


Q ss_pred             CCCCC-CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHH
Q 042185           73 NAGVQ-CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDT  151 (162)
Q Consensus        73 ~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~  151 (162)
                      |||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|+++|+++++|+++
T Consensus        99 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~  178 (252)
T 3f1l_A           99 NAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQV  178 (252)
T ss_dssp             CCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             CCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchhHHHHHHHHHHHHH
Confidence            99985 45688899999999999999999999999999999988889999999999999999999999999999999999


Q ss_pred             HHHHhccCCCC
Q 042185          152 LRLELGHFGID  162 (162)
Q Consensus       152 l~~e~~~~gi~  162 (162)
                      ++.|+++. ||
T Consensus       179 la~e~~~~-ir  188 (252)
T 3f1l_A          179 LADEYQQR-LR  188 (252)
T ss_dssp             HHHHTTTT-CE
T ss_pred             HHHHhcCC-cE
Confidence            99999876 64

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=2.8e-36  Score=216.44  Aligned_cols=162  Identities=23%  Similarity=0.310  Sum_probs=148.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhH-------Hhhh-----cCCceeEEEeccCChHHHHHHHHHHHHHcCCcc
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATM-------ADLE-----QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKID   68 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~-------~~~~-----~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id   68 (162)
                      ||++|||+++|++|+++|++|++++|+.+..       ++..     ...++.++.+|++|+++++++++++.+++|++|
T Consensus        13 Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   92 (274)
T 3e03_A           13 GASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVDTFGGID   92 (274)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            8999999999999999999999999986532       2211     146788999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC--CCCchhhhHhHHHHH
Q 042185           69 VLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP--GPWAGTYTASKAALH  146 (162)
Q Consensus        69 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~~~y~~sKaa~~  146 (162)
                      ++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+  .+....|++||+++.
T Consensus        93 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~asKaal~  172 (274)
T 3e03_A           93 ILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMS  172 (274)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHHCHHHHHHHHHHH
T ss_pred             EEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCCCchHHHHHHHHH
Confidence            999999998888888999999999999999999999999999998888899999999998887  677889999999999


Q ss_pred             HHHHHHHHHhccCCCC
Q 042185          147 SLTDTLRLELGHFGID  162 (162)
Q Consensus       147 ~l~~~l~~e~~~~gi~  162 (162)
                      +|+++++.|++++|||
T Consensus       173 ~l~~~la~e~~~~gI~  188 (274)
T 3e03_A          173 LVTLGLAAEFGPQGVA  188 (274)
T ss_dssp             HHHHHHHHHHGGGTCE
T ss_pred             HHHHHHHHHhhhcCEE
Confidence            9999999999999986

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.8e-36  Score=214.73  Aligned_cols=162  Identities=28%  Similarity=0.363  Sum_probs=150.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++..     ..++.++.+|++|+++++.+++++.++++++|++|||||
T Consensus        15 Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg   94 (280)
T 3tox_A           15 GASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAG   94 (280)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            899999999999999999999999999887766543     357889999999999999999999999999999999999


Q ss_pred             CC-CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccccc-CCCCCchhhhHhHHHHHHHHHHHH
Q 042185           76 VQ-CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVA-APGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        76 ~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      .. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+. .+.++...|++||+++++|+++++
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la  174 (280)
T 3tox_A           95 ALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALA  174 (280)
T ss_dssp             CCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHHHHHHHHHHHHHHH
Confidence            76 4578889999999999999999999999999999998888999999999988 778899999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       175 ~e~~~~gIr  183 (280)
T 3tox_A          175 VELGARGIR  183 (280)
T ss_dssp             HHHHTTTEE
T ss_pred             HHhhhcCeE
Confidence            999999885

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=2.1e-35  Score=214.31  Aligned_cols=162  Identities=23%  Similarity=0.369  Sum_probs=147.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecC------------hhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHH
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRS------------KATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEK   63 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~------------~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~   63 (162)
                      ||++|||+++|++|+++|++|++++|+            .+.+++...     ..++.++.+|++|+++++++++++.++
T Consensus        35 Gas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  114 (299)
T 3t7c_A           35 GAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVTQ  114 (299)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            899999999999999999999999987            444443322     367899999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCC-CCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHh
Q 042185           64 FGKIDVLVNNAGVQCVGP-LAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTAS  141 (162)
Q Consensus        64 ~~~id~vi~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~s  141 (162)
                      +|++|++|||||+....+ +.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.+....|++|
T Consensus       115 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~as  194 (299)
T 3t7c_A          115 LGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIAS  194 (299)
T ss_dssp             HSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             hCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCcchHHHH
Confidence            999999999999876554 88999999999999999999999999999987664 7899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCCC
Q 042185          142 KAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       142 Kaa~~~l~~~l~~e~~~~gi~  162 (162)
                      |+++++|+++++.|++++|||
T Consensus       195 Kaa~~~l~~~la~e~~~~gI~  215 (299)
T 3t7c_A          195 KHGLHGLMRTMALELGPRNIR  215 (299)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEE
T ss_pred             HHHHHHHHHHHHHHhcccCcE
Confidence            999999999999999999885

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=1.9e-35  Score=210.00  Aligned_cols=162  Identities=28%  Similarity=0.317  Sum_probs=151.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC--CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||++++++|+++|++|++++|+.+.++++.++  .++.++.+|++|+++++++++++.++++++|++|||||...
T Consensus        12 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~nAg~~~   91 (254)
T 1hdc_A           12 GGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGIST   91 (254)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            8999999999999999999999999998877766543  35788999999999999999999999999999999999877


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|+++++|+++++.|+++
T Consensus        92 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~  171 (254)
T 1hdc_A           92 GMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGT  171 (254)
T ss_dssp             CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Confidence            77888899999999999999999999999999998877899999999999999999999999999999999999999999


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +|||
T Consensus       172 ~gi~  175 (254)
T 1hdc_A          172 DRIR  175 (254)
T ss_dssp             GTEE
T ss_pred             cCeE
Confidence            8875

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=1.8e-35  Score=210.77  Aligned_cols=162  Identities=27%  Similarity=0.419  Sum_probs=149.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhh-HHhhhc------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKAT-MADLEQ------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~-~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||++|||++++++|+++|++|++++|+.+. ++++.+      ..++.++.+|++|+++++++++++.++++++|++|||
T Consensus        11 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~   90 (260)
T 1x1t_A           11 GSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNN   90 (260)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCSEEEEC
T ss_pred             CCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            899999999999999999999999998776 554432      3568889999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      ||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+++|+++++|++.++
T Consensus        91 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la  170 (260)
T 1x1t_A           91 AGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTA  170 (260)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHHHHHHHHHHHHH
Confidence            99877778888999999999999999999999999999988778999999999999999999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       171 ~e~~~~gi~  179 (260)
T 1x1t_A          171 LETAGQGIT  179 (260)
T ss_dssp             HHHTTTTEE
T ss_pred             HHhccCCEE
Confidence            999999875

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=2.7e-35  Score=210.04  Aligned_cols=162  Identities=31%  Similarity=0.419  Sum_probs=151.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++..     ...+.++.+|+++.++++.+++++.+.++++|++|||||
T Consensus        36 Gas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag  115 (262)
T 3rkr_A           36 GASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAG  115 (262)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            899999999999999999999999999887766533     357889999999999999999999999999999999999


Q ss_pred             C-CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           76 V-QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        76 ~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      . ....++.+.+.++|+..+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|+++|+++++|+++++.
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~  195 (262)
T 3rkr_A          116 VGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAE  195 (262)
T ss_dssp             CCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHHHHHHHHHHHHHHH
Confidence            8 456788889999999999999999999999999999888889999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |+++.|||
T Consensus       196 e~~~~gi~  203 (262)
T 3rkr_A          196 ELRQHQVR  203 (262)
T ss_dssp             HHGGGTCE
T ss_pred             HhhhcCcE
Confidence            99999885

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=3.8e-35  Score=209.82  Aligned_cols=162  Identities=31%  Similarity=0.501  Sum_probs=149.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||++++++|+++|++|++++|+.+.+++..+      ..++.++.+|++++++++++++++.++++++|++||||
T Consensus        28 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnA  107 (267)
T 1vl8_A           28 GGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAA  107 (267)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            899999999999999999999999999876654422      35678899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccc-ccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVT-VAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      |.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||.. +..+.++...|+++|+++++|+++++
T Consensus       108 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la  187 (267)
T 1vl8_A          108 GINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALA  187 (267)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChhHHHHHHHHHHHHHHHH
Confidence            98777788899999999999999999999999999999887789999999998 88888899999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       188 ~e~~~~gi~  196 (267)
T 1vl8_A          188 KEWGRYGIR  196 (267)
T ss_dssp             HHHGGGTCE
T ss_pred             HHhcccCeE
Confidence            999999985

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=3.1e-35  Score=214.98  Aligned_cols=162  Identities=28%  Similarity=0.396  Sum_probs=148.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecC------------hhhHHhhh-----cCCceeEEEeccCChHHHHHHHHHHHHH
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRS------------KATMADLE-----QDPRFFVQELDVLSEQSVQNVLSNVLEK   63 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~------------~~~~~~~~-----~~~~~~~~~~D~~~~~~i~~~~~~~~~~   63 (162)
                      ||++|||+++|++|+++|++|++++|+            .+.+++..     ...++.++.+|++|+++++++++++.++
T Consensus        53 Gas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  132 (317)
T 3oec_A           53 GAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVVDEALAE  132 (317)
T ss_dssp             SCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            899999999999999999999999886            34443332     1467889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhH
Q 042185           64 FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASK  142 (162)
Q Consensus        64 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sK  142 (162)
                      +|++|++|||||+....++.+.+.++|++.+++|+.+++.++++++|.|++++ +|+||++||..+..+.++...|++||
T Consensus       133 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  212 (317)
T 3oec_A          133 FGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASK  212 (317)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCTTBHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCCCCcchHHHH
Confidence            99999999999998888899999999999999999999999999999998765 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCCC
Q 042185          143 AALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       143 aa~~~l~~~l~~e~~~~gi~  162 (162)
                      +++++|+++++.|++++|||
T Consensus       213 aa~~~l~~~la~e~~~~gI~  232 (317)
T 3oec_A          213 HGVQGLMLSLANEVGRHNIR  232 (317)
T ss_dssp             HHHHHHHHHHHHHHGGGTEE
T ss_pred             HHHHHHHHHHHHHHhhcCeE
Confidence            99999999999999999885

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=1.4e-35  Score=211.31  Aligned_cols=160  Identities=14%  Similarity=0.142  Sum_probs=146.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||++|||+++|++|+++|++|++++|+.+...+...+..+.++.+|++|+++++++++++.++++++|++|||||.....
T Consensus        34 Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~  113 (260)
T 3gem_A           34 GASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAE  113 (260)
T ss_dssp             STTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCC
Confidence            89999999999999999999999999987654443334578999999999999999999999999999999999987555


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccCC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG  160 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~g  160 (162)
                      + .+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|+++|+++++|+++++.|+++ +
T Consensus       114 ~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~-~  191 (260)
T 3gem_A          114 T-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFAP-L  191 (260)
T ss_dssp             C-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHHHHHHHHHHHHHHHHHHTT-T
T ss_pred             C-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHHHHHHHHHHHHHHHHHHCC-C
Confidence            4 5678899999999999999999999999998888899999999999999999999999999999999999999988 5


Q ss_pred             CC
Q 042185          161 ID  162 (162)
Q Consensus       161 i~  162 (162)
                      ||
T Consensus       192 Ir  193 (260)
T 3gem_A          192 VK  193 (260)
T ss_dssp             CE
T ss_pred             CE
Confidence            64

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.3e-35  Score=214.24  Aligned_cols=162  Identities=24%  Similarity=0.351  Sum_probs=152.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++.+     ...+.++.+|++|.++++++++++.+.++++|++|||||
T Consensus        38 Gas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lvnnAg  117 (301)
T 3tjr_A           38 GGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAG  117 (301)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEECCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence            899999999999999999999999999887766533     357899999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      .....++.+.+.++|+..+++|+.+++.++++++|.|++++ .++||++||..+..+.++...|++||+++++|+++++.
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~  197 (301)
T 3tjr_A          118 IVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAR  197 (301)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHHHHHHHHHHHHHH
Confidence            98888899999999999999999999999999999998776 78999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |+++.|||
T Consensus       198 e~~~~gi~  205 (301)
T 3tjr_A          198 EVKPNGIG  205 (301)
T ss_dssp             HHGGGTEE
T ss_pred             HhcccCcE
Confidence            99998875

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=2.8e-35  Score=209.48  Aligned_cols=162  Identities=28%  Similarity=0.397  Sum_probs=149.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhh--HHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKAT--MADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~--~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||++|||++++++|+++|++|++++|+.+.  +++..+     ..++.++.+|++|+++++++++++.++++++|++|||
T Consensus         9 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~n   88 (258)
T 3a28_C            9 GGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNN   88 (258)
T ss_dssp             TTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEEC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            899999999999999999999999998776  544322     3578899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCC-CeEEEeccccccCCCCCchhhhHhHHHHHHHHHHH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK-GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTL  152 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l  152 (162)
                      ||.....++.+.+.++|++.+++|+.+++.++++++|.|++++. ++||++||..+..+.++...|+++|+++++|++++
T Consensus        89 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l  168 (258)
T 3a28_C           89 AGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAA  168 (258)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHHHHHHHHHHH
Confidence            99877778888999999999999999999999999999987776 89999999999999999999999999999999999


Q ss_pred             HHHhccCCCC
Q 042185          153 RLELGHFGID  162 (162)
Q Consensus       153 ~~e~~~~gi~  162 (162)
                      +.|++++|||
T Consensus       169 a~e~~~~gi~  178 (258)
T 3a28_C          169 AQELAPKGHT  178 (258)
T ss_dssp             HHHHGGGTCE
T ss_pred             HHHHHhhCeE
Confidence            9999999985

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=3.7e-35  Score=209.37  Aligned_cols=162  Identities=29%  Similarity=0.398  Sum_probs=150.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||++++++|+++|++|++++|+.+.++++.+      ..++.++.+|++|+++++++++++.++++++|++||||
T Consensus        14 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~A   93 (263)
T 3ai3_A           14 GSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNA   93 (263)
T ss_dssp             SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECC
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            899999999999999999999999999876655432      35688999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+++|+++++|+++++.
T Consensus        94 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~  173 (263)
T 3ai3_A           94 GTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLAT  173 (263)
T ss_dssp             CCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHHHHHHHHHHHHHHH
Confidence            98877788899999999999999999999999999999887789999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       174 e~~~~gi~  181 (263)
T 3ai3_A          174 EVIKDNIR  181 (263)
T ss_dssp             HHGGGTEE
T ss_pred             HhhhcCcE
Confidence            99998875

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=2.9e-35  Score=208.45  Aligned_cols=162  Identities=29%  Similarity=0.385  Sum_probs=149.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh-hhHHh-hhc-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK-ATMAD-LEQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~-~~~~~-~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      ||++|||++++++|+++|++|++++|+. +.+++ +.. ..++.++.+|++|+++++++++++.++++++|++|||||..
T Consensus        14 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~   93 (249)
T 2ew8_A           14 GGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIY   93 (249)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            8999999999999999999999999997 65543 221 35688899999999999999999999999999999999987


Q ss_pred             CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhc
Q 042185           78 CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                      ...++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+++|+++++|+++++.|++
T Consensus        94 ~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~  173 (249)
T 2ew8_A           94 PLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLG  173 (249)
T ss_dssp             CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHHHHHHHHHHHHHHHHH
Confidence            77788899999999999999999999999999999888789999999999999999999999999999999999999999


Q ss_pred             cCCCC
Q 042185          158 HFGID  162 (162)
Q Consensus       158 ~~gi~  162 (162)
                      ++|||
T Consensus       174 ~~gi~  178 (249)
T 2ew8_A          174 KDGIT  178 (249)
T ss_dssp             GGTEE
T ss_pred             hcCcE
Confidence            98875

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=4.2e-35  Score=210.19  Aligned_cols=162  Identities=25%  Similarity=0.324  Sum_probs=150.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHc-CCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKF-GKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~id~vi~~a   74 (162)
                      ||++|||++++++|+++|++|++++|+.+.+++..+     ...+.++.+|++|+++++++++++.+.+ +++|++||||
T Consensus        28 Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~nA  107 (273)
T 1ae1_A           28 GGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNA  107 (273)
T ss_dssp             SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECC
T ss_pred             CCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCcEEEECC
Confidence            899999999999999999999999999876665432     3578899999999999999999999999 9999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.++|+..+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+++|+++++|+++++.
T Consensus       108 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~  187 (273)
T 1ae1_A          108 GVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLAC  187 (273)
T ss_dssp             CCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHHHHHHHHHHHHHHH
Confidence            98777788899999999999999999999999999999887789999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       188 e~~~~gi~  195 (273)
T 1ae1_A          188 EWAKDNIR  195 (273)
T ss_dssp             HHGGGTEE
T ss_pred             HHhhcCcE
Confidence            99998875

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=1.9e-35  Score=208.99  Aligned_cols=162  Identities=28%  Similarity=0.391  Sum_probs=149.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEec-ChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGR-SKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r-~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||++++++|+++|++|++++| +.+.++++.+     ..++.++.+|++|+++++++++++.++++++|++||||
T Consensus        11 Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nA   90 (246)
T 2uvd_A           11 GASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNA   90 (246)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            89999999999999999999999999 7666554322     35688999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|+++.+|+++++.
T Consensus        91 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~  170 (246)
T 2uvd_A           91 GVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAK  170 (246)
T ss_dssp             CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHHHHHHHHHHHHH
Confidence            98777788899999999999999999999999999999887789999999999988889999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       171 e~~~~gi~  178 (246)
T 2uvd_A          171 ELASRNIT  178 (246)
T ss_dssp             HHGGGTEE
T ss_pred             HhhhcCeE
Confidence            99998875

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=3.8e-35  Score=208.62  Aligned_cols=162  Identities=28%  Similarity=0.362  Sum_probs=149.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||++++++|+++|++|++++|+.+.++++.+     ..++.++.+|++|+++++++++++.++++++|++|||||
T Consensus         9 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg   88 (256)
T 1geg_A            9 GAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAG   88 (256)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCC
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence            899999999999999999999999999876655432     356889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      .....++.+.+.++|++.+++|+.+++.++++++|.|++++ .++||++||..+..+.+....|+++|+++++|+++++.
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~  168 (256)
T 1geg_A           89 VAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAAR  168 (256)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHHHHHHHHHH
Confidence            87777888899999999999999999999999999998776 78999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       169 e~~~~gi~  176 (256)
T 1geg_A          169 DLAPLGIT  176 (256)
T ss_dssp             HHGGGTEE
T ss_pred             HHHHcCeE
Confidence            99999875

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.1e-35  Score=211.57  Aligned_cols=162  Identities=23%  Similarity=0.329  Sum_probs=142.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC--CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||+++|++|+++|++|++++|+.+..++...+  ..+.++.+|++|+++++++++++.+++|++|++|||||...
T Consensus        14 Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~   93 (257)
T 3tpc_A           14 GASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAP   93 (257)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            8999999999999999999999999998877665543  46889999999999999999999999999999999999875


Q ss_pred             CCCCC----CCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc------CCCeEEEeccccccCCCCCchhhhHhHHHHHHH
Q 042185           79 VGPLA----EVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR------KKGKIINVGSVTVAAPGPWAGTYTASKAALHSL  148 (162)
Q Consensus        79 ~~~~~----~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l  148 (162)
                      ..++.    +.+.++|++.+++|+.+++.+++++.|.|+++      +.|+||++||..+..+.++...|++||+++++|
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  173 (257)
T 3tpc_A           94 GEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAAL  173 (257)
T ss_dssp             CCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHH
T ss_pred             CCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCCCcchHHHHHHHHHH
Confidence            54433    67899999999999999999999999999874      578999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCCC
Q 042185          149 TDTLRLELGHFGID  162 (162)
Q Consensus       149 ~~~l~~e~~~~gi~  162 (162)
                      +++++.|++++|||
T Consensus       174 ~~~la~e~~~~gi~  187 (257)
T 3tpc_A          174 TLPAARELARFGIR  187 (257)
T ss_dssp             HHHHHHHHGGGTEE
T ss_pred             HHHHHHHHHHcCeE
Confidence            99999999999885

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-35  Score=208.78  Aligned_cols=162  Identities=28%  Similarity=0.374  Sum_probs=152.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||+++|++|+++|++|++++|+.+..+++..     ..++.++.+|++|+++++++++++.++++++|++|||||
T Consensus        12 Gas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag   91 (247)
T 3lyl_A           12 GASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDILVNNAG   91 (247)
T ss_dssp             SCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSEEEECCC
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            899999999999999999999999999877665533     357889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....++.+.+.++|+..+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|+++|+++++|+++++.|
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e  171 (247)
T 3lyl_A           92 ITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYE  171 (247)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            98888888999999999999999999999999999998888899999999999999999999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      ++++|||
T Consensus       172 ~~~~gi~  178 (247)
T 3lyl_A          172 VASRNIT  178 (247)
T ss_dssp             HGGGTEE
T ss_pred             HHHcCeE
Confidence            9998875

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=3.9e-35  Score=209.05  Aligned_cols=162  Identities=28%  Similarity=0.379  Sum_probs=150.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC--CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||++++++|+++|++|++++|+.+..+++.++  ..+.++.+|++|+++++++++++.++++++|++|||||...
T Consensus        14 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~   93 (260)
T 1nff_A           14 GGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILN   93 (260)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            8999999999999999999999999998776655432  24788999999999999999999999999999999999887


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|+++++|++.++.|+++
T Consensus        94 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~  173 (260)
T 1nff_A           94 IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGP  173 (260)
T ss_dssp             CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHHHHHHHHHHHHHHhCc
Confidence            77888999999999999999999999999999998877899999999999999999999999999999999999999999


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +|||
T Consensus       174 ~gi~  177 (260)
T 1nff_A          174 SGIR  177 (260)
T ss_dssp             GTEE
T ss_pred             cCcE
Confidence            8875

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=3.1e-35  Score=211.12  Aligned_cols=161  Identities=22%  Similarity=0.322  Sum_probs=149.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||+++|++|+++|++|++++|+.+..+++..     ...+.++.+|++|.++++.+++++.+. +++|++|||||
T Consensus        40 Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-g~iD~lvnnAg  118 (275)
T 4imr_A           40 GSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI-APVDILVINAS  118 (275)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH-SCCCEEEECCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh-CCCCEEEECCC
Confidence            899999999999999999999999999876655432     467889999999999999999999887 99999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.+....|++||+++++|+++++.|
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e  198 (275)
T 4imr_A          119 AQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQHNLIQSQARD  198 (275)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHHHHHHHHHHHHHHHH
Confidence            98888899999999999999999999999999999999888899999999999998888899999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      ++++|||
T Consensus       199 ~~~~gI~  205 (275)
T 4imr_A          199 FAGDNVL  205 (275)
T ss_dssp             HGGGTEE
T ss_pred             hcccCcE
Confidence            9999885

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=5e-35  Score=208.43  Aligned_cols=162  Identities=23%  Similarity=0.342  Sum_probs=150.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHc-CCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKF-GKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|++++|+.+.+++..+     ..++.++.+|++|+++++++++++.+++ +++|++||||
T Consensus        16 Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~A   95 (260)
T 2ae2_A           16 GGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNA   95 (260)
T ss_dssp             SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEECC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCCEEEECC
Confidence            899999999999999999999999999877655432     3568889999999999999999999999 8999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.++|+..+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+++|+++++|+++++.
T Consensus        96 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~  175 (260)
T 2ae2_A           96 GIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAF  175 (260)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHHHHHHHHHHHHHHH
Confidence            98777788889999999999999999999999999999887789999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       176 e~~~~gi~  183 (260)
T 2ae2_A          176 EWAKDNIR  183 (260)
T ss_dssp             HTGGGTEE
T ss_pred             HHhhcCcE
Confidence            99998875

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=3.3e-35  Score=209.58  Aligned_cols=162  Identities=29%  Similarity=0.426  Sum_probs=150.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||++++++|+++|++|++++|+.+.++++..     ..++.++.+|++|+++++.+++++.+.++++|++|||||
T Consensus        14 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg   93 (262)
T 1zem_A           14 GAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAG   93 (262)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence            899999999999999999999999999876665432     346889999999999999999999999999999999999


Q ss_pred             CC-CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           76 VQ-CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        76 ~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      .. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.+....|+++|+++.+|++.++.
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~  173 (262)
T 1zem_A           94 YQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAAL  173 (262)
T ss_dssp             CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHHHHHHHHHHHHHH
Confidence            87 66788889999999999999999999999999999887789999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       174 e~~~~gi~  181 (262)
T 1zem_A          174 DLAPYNIR  181 (262)
T ss_dssp             HHGGGTEE
T ss_pred             HHHhhCeE
Confidence            99999885

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=3.7e-35  Score=210.13  Aligned_cols=156  Identities=29%  Similarity=0.408  Sum_probs=145.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||++|||+++|++|+++|++|++++|+.+...     .....+.+|++|+++++++++++.++++++|++|||||.....
T Consensus        21 Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~   95 (269)
T 3vtz_A           21 GGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV-----NVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYS   95 (269)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESCC--CT-----TSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc-----CceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCC
Confidence            89999999999999999999999999876542     2567889999999999999999999999999999999998888


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccCC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG  160 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~g  160 (162)
                      ++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..++.+.+....|++||+++++|+++++.|+++ |
T Consensus        96 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~-~  174 (269)
T 3vtz_A           96 PLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-K  174 (269)
T ss_dssp             CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHTT-T
T ss_pred             CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHHHHHHHHHHHHHHHHhcC-C
Confidence            889999999999999999999999999999999888899999999999999999999999999999999999999988 7


Q ss_pred             CC
Q 042185          161 ID  162 (162)
Q Consensus       161 i~  162 (162)
                      ||
T Consensus       175 i~  176 (269)
T 3vtz_A          175 IR  176 (269)
T ss_dssp             EE
T ss_pred             CE
Confidence            64

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=4.2e-35  Score=208.42  Aligned_cols=160  Identities=28%  Similarity=0.360  Sum_probs=147.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      ||++|||++++++|+++|++|++++|+.+. ++..++ .. .++.+|++|+++++++++++.+.++++|++|||||....
T Consensus        13 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~   90 (256)
T 2d1y_A           13 GGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAP   90 (256)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence            899999999999999999999999999776 444322 13 788999999999999999999999999999999998877


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccC
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHF  159 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~  159 (162)
                      .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+++|+++++|+++++.|++++
T Consensus        91 ~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~  170 (256)
T 2d1y_A           91 GSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPL  170 (256)
T ss_dssp             BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHHHHHHHHHHHHHHHhhc
Confidence            78889999999999999999999999999999988778999999999999999999999999999999999999999998


Q ss_pred             CCC
Q 042185          160 GID  162 (162)
Q Consensus       160 gi~  162 (162)
                      |||
T Consensus       171 gi~  173 (256)
T 2d1y_A          171 RIR  173 (256)
T ss_dssp             TEE
T ss_pred             CeE
Confidence            875

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=4.4e-35  Score=210.45  Aligned_cols=162  Identities=27%  Similarity=0.377  Sum_probs=148.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++.+     ..++.++.+|++|+++++++++++.+++|++|++|||||
T Consensus        39 Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lvnnAg  118 (276)
T 3r1i_A           39 GASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAG  118 (276)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            899999999999999999999999999877665543     357889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCC--CCchhhhHhHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPG--PWAGTYTASKAALHSLTDTL  152 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~--~~~~~y~~sKaa~~~l~~~l  152 (162)
                      .....++.+.+.++|++.+++|+.+++.++++++|.|++++ +++||++||..+..+.  +....|++||+++++|++++
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~asKaa~~~l~~~l  198 (276)
T 3r1i_A          119 IVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAM  198 (276)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHHHHHHHHHHHHHHH
Confidence            98888888999999999999999999999999999998766 4899999999887654  36788999999999999999


Q ss_pred             HHHhccCCCC
Q 042185          153 RLELGHFGID  162 (162)
Q Consensus       153 ~~e~~~~gi~  162 (162)
                      +.|++++|||
T Consensus       199 a~e~~~~gIr  208 (276)
T 3r1i_A          199 AVELAPHQIR  208 (276)
T ss_dssp             HHHHGGGTEE
T ss_pred             HHHHhhcCcE
Confidence            9999999885

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.8e-35  Score=212.09  Aligned_cols=162  Identities=28%  Similarity=0.434  Sum_probs=149.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC----CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD----PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||++|||++++++|+++|++|++++|+.+.++++.++    .++.++.+|++|+++++.+++++.++++++|++|||||.
T Consensus        28 Gas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~  107 (272)
T 2nwq_A           28 GATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGL  107 (272)
T ss_dssp             STTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEEEECCCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence            8999999999999999999999999998877665432    468899999999999999999999999999999999998


Q ss_pred             CCC-CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCC-eEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           77 QCV-GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG-KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        77 ~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      ... .++.+.+.++|++.+++|+.+++.+++.++|.|++++.| +||++||..+..+.++...|+++|+++++|+++++.
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~  187 (272)
T 2nwq_A          108 ALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRC  187 (272)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHHHHHHHHHHHHHHH
Confidence            653 788889999999999999999999999999999887778 999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       188 el~~~gIr  195 (272)
T 2nwq_A          188 DLQGTGVR  195 (272)
T ss_dssp             TCTTSCCE
T ss_pred             HhCccCeE
Confidence            99999986

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.6e-35  Score=212.02  Aligned_cols=162  Identities=30%  Similarity=0.410  Sum_probs=138.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEec-ChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGR-SKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r-~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|++++| +.+.+++..+     ..++.++.+|++|+++++++++++.++++++|++||||
T Consensus        36 Gas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnA  115 (280)
T 4da9_A           36 GGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNA  115 (280)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSCCCEEEEEC
T ss_pred             cCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            89999999999999999999999996 6555544322     35789999999999999999999999999999999999


Q ss_pred             CC--CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC---CCeEEEeccccccCCCCCchhhhHhHHHHHHHH
Q 042185           75 GV--QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK---KGKIINVGSVTVAAPGPWAGTYTASKAALHSLT  149 (162)
Q Consensus        75 g~--~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~  149 (162)
                      |.  ....++.+.+.++|++.+++|+.+++.++++++|.|++++   .|+||++||..+..+.++...|+++|+++++|+
T Consensus       116 g~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~  195 (280)
T 4da9_A          116 GIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFS  195 (280)
T ss_dssp             C------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHHHHHHHHHHHHHH
T ss_pred             CccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccHHHHHHHHHHHHH
Confidence            98  4557888999999999999999999999999999998765   689999999999999999999999999999999


Q ss_pred             HHHHHHhccCCCC
Q 042185          150 DTLRLELGHFGID  162 (162)
Q Consensus       150 ~~l~~e~~~~gi~  162 (162)
                      ++++.|++++|||
T Consensus       196 ~~la~e~~~~gI~  208 (280)
T 4da9_A          196 QGLALRLAETGIA  208 (280)
T ss_dssp             HHHHHHHTTTTEE
T ss_pred             HHHHHHHHHhCcE
Confidence            9999999999885

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=5.8e-35  Score=208.06  Aligned_cols=162  Identities=28%  Similarity=0.407  Sum_probs=150.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++..  ...+.++.+|++|.++++++++++.++++++|++|||||...
T Consensus        16 Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~   95 (261)
T 3n74_A           16 GAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGH   95 (261)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCC
Confidence            899999999999999999999999999988777654  367899999999999999999999999999999999999865


Q ss_pred             -CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC----CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           79 -VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK----KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        79 -~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++    .++||++||..+..+.+....|+++|+++++|+++++
T Consensus        96 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la  175 (261)
T 3n74_A           96 KPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALA  175 (261)
T ss_dssp             CSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHHHHHHHHHHHHHHHH
Confidence             56788889999999999999999999999999998653    6789999999999999999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       176 ~e~~~~gi~  184 (261)
T 3n74_A          176 IELAPAKIR  184 (261)
T ss_dssp             HHHGGGTEE
T ss_pred             HHhhhcCcE
Confidence            999998875

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=5.9e-35  Score=207.48  Aligned_cols=162  Identities=26%  Similarity=0.348  Sum_probs=148.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEe-cChhhHHhh----h-cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATG-RSKATMADL----E-QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~-r~~~~~~~~----~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|++++ |+.+..++.    . ....+.++.+|++|.++++++++++.++++++|++||||
T Consensus        20 Gas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~~A   99 (256)
T 3ezl_A           20 GGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNA   99 (256)
T ss_dssp             TTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            8999999999999999999999888 554433332    1 235788999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|+++++|+++++.
T Consensus       100 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~  179 (256)
T 3ezl_A          100 GITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQ  179 (256)
T ss_dssp             CCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHHHHHHHHHHHHHHHH
Confidence            99888888999999999999999999999999999999988889999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       180 e~~~~gi~  187 (256)
T 3ezl_A          180 EVATKGVT  187 (256)
T ss_dssp             HHGGGTEE
T ss_pred             HHHHhCCE
Confidence            99998875

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=6.5e-35  Score=209.89  Aligned_cols=162  Identities=35%  Similarity=0.529  Sum_probs=152.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||+||||+++|++|+++|++|++++|+.+.++++..  ...+.++.+|++|.++++.+++++.++++++|++|||||...
T Consensus        12 Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~   91 (281)
T 3m1a_A           12 GASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQ   91 (281)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCEE
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCC
Confidence            899999999999999999999999999887776644  357889999999999999999999999999999999999987


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ..++.+.+.++|+..+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|++||+++++|++.++.|+++
T Consensus        92 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~  171 (281)
T 3m1a_A           92 VGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAP  171 (281)
T ss_dssp             ECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHHHHHHHHHHHHHhhc
Confidence            78888999999999999999999999999999999888899999999999999999999999999999999999999999


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +|||
T Consensus       172 ~gi~  175 (281)
T 3m1a_A          172 FGIK  175 (281)
T ss_dssp             GTEE
T ss_pred             cCcE
Confidence            8875

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=8.3e-35  Score=208.69  Aligned_cols=161  Identities=27%  Similarity=0.355  Sum_probs=144.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHH---hhhc-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMA---DLEQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~---~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||++|||+++|++|+++|++|++++|+....+   ++.. ..++.++.+|++|.++++++.+ ..++++++|++|||||.
T Consensus        38 Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~-~~~~~g~iD~lv~nAg~  116 (273)
T 3uf0_A           38 GAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAE-ELAATRRVDVLVNNAGI  116 (273)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHH-HHHHHSCCCEEEECCCC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH-HHHhcCCCcEEEECCCC
Confidence            89999999999999999999999997743222   1222 3578899999999999999944 45667999999999999


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHh
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                      ....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|+++|+++++|+++++.|+
T Consensus       117 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~  196 (273)
T 3uf0_A          117 IARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEW  196 (273)
T ss_dssp             CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHHHHHHHHHHHHHHHHH
Confidence            88888999999999999999999999999999999998888999999999999999999999999999999999999999


Q ss_pred             ccCCCC
Q 042185          157 GHFGID  162 (162)
Q Consensus       157 ~~~gi~  162 (162)
                      +++|||
T Consensus       197 ~~~gI~  202 (273)
T 3uf0_A          197 AGRGVG  202 (273)
T ss_dssp             GGGTEE
T ss_pred             hhcCcE
Confidence            999885

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=9.8e-35  Score=207.46  Aligned_cols=162  Identities=26%  Similarity=0.331  Sum_probs=150.0

Q ss_pred             CCC-CchHHHHHHHHHHCCCeEEEEecChhhHHhhhc------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQ-GGIGHALARAFAASDCRVVATGRSKATMADLEQ------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~-~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+ +|||+++|++|+++|++|++++|+.+.+++..+      ..++.++.+|++|.++++++++++.++++++|++|||
T Consensus        29 Gasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~  108 (266)
T 3o38_A           29 AAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNN  108 (266)
T ss_dssp             SCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCCcEEEEC
Confidence            776 599999999999999999999999877665433      2578999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-CCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTL  152 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l  152 (162)
                      ||.....++.+.+.++|++.+++|+.+++.+++.++|.|+++ +.++||++||..+..+.++...|+++|+++++|++++
T Consensus       109 Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~l  188 (266)
T 3o38_A          109 AGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCS  188 (266)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchHHHHHHHHHHHHHHH
Confidence            999888888899999999999999999999999999999876 6789999999999999999999999999999999999


Q ss_pred             HHHhccCCCC
Q 042185          153 RLELGHFGID  162 (162)
Q Consensus       153 ~~e~~~~gi~  162 (162)
                      +.|++++|||
T Consensus       189 a~e~~~~gi~  198 (266)
T 3o38_A          189 AIEAVEFGVR  198 (266)
T ss_dssp             HHHHGGGTEE
T ss_pred             HHHHHHcCcE
Confidence            9999998875

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=8.1e-35  Score=212.91  Aligned_cols=162  Identities=25%  Similarity=0.438  Sum_probs=150.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC-------CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD-------PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~-------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+||||+++|++|+++|++|++++|+.+.++++..+       ..+.++.+|+++.++++.+++++.+.++++|++|||
T Consensus        15 Gas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~n   94 (319)
T 3ioy_A           15 GGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPVSILCNN   94 (319)
T ss_dssp             TTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred             CCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            8999999999999999999999999998877655331       278899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc------CCCeEEEeccccccCCCCCchhhhHhHHHHHH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR------KKGKIINVGSVTVAAPGPWAGTYTASKAALHS  147 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~  147 (162)
                      ||+...+++.+.+.++|+.++++|+.+++.+++.++|.|.++      +.|+||++||..+..+.+....|++||+|+.+
T Consensus        95 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~~~Y~aSKaal~~  174 (319)
T 3ioy_A           95 AGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRG  174 (319)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSSHHHHHHHHHHHH
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCCHHHHHHHHHHHH
Confidence            999888889999999999999999999999999999999765      57899999999999999999999999999999


Q ss_pred             HHHHHHHHhccCCCC
Q 042185          148 LTDTLRLELGHFGID  162 (162)
Q Consensus       148 l~~~l~~e~~~~gi~  162 (162)
                      |+++++.|+++.||+
T Consensus       175 ~~~~la~e~~~~gi~  189 (319)
T 3ioy_A          175 LSESLHYSLLKYEIG  189 (319)
T ss_dssp             HHHHHHHHHGGGTCE
T ss_pred             HHHHHHHHhhhcCCE
Confidence            999999999998875

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.9e-34  Score=205.75  Aligned_cols=162  Identities=26%  Similarity=0.359  Sum_probs=150.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCC--ceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDP--RFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||++++++|+++|++|++++|+.+.+++...+.  .+.++.+|++|+++++++++++.+++|++|++|||||...
T Consensus        19 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~   98 (263)
T 3ak4_A           19 GGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVST   98 (263)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCC
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence            89999999999999999999999999988777655432  6788999999999999999999999999999999999877


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                      ..++.+.+.++|+..+++|+.+++.+++++.|.|++++ .++||++||..+..+.+....|+++|++++.|++.++.|++
T Consensus        99 ~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~  178 (263)
T 3ak4_A           99 MRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMA  178 (263)
T ss_dssp             CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHHHHHHHHHHHHHHHHh
Confidence            77888899999999999999999999999999998776 79999999999999999999999999999999999999999


Q ss_pred             cCCCC
Q 042185          158 HFGID  162 (162)
Q Consensus       158 ~~gi~  162 (162)
                      ++|||
T Consensus       179 ~~gi~  183 (263)
T 3ak4_A          179 PKNIR  183 (263)
T ss_dssp             GGTCE
T ss_pred             HcCeE
Confidence            99885

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=9.5e-35  Score=210.65  Aligned_cols=161  Identities=29%  Similarity=0.447  Sum_probs=147.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CC---ceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DP---RFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~---~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++.+     ..   ++.++.+|++|+++++++++++.++++++|++||
T Consensus        33 Gas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn  112 (297)
T 1xhl_A           33 GSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVN  112 (297)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            899999999999999999999999999877665432     22   6889999999999999999999999999999999


Q ss_pred             CCCCCCCCC--CCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC-CCchhhhHhHHHHHHHH
Q 042185           73 NAGVQCVGP--LAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG-PWAGTYTASKAALHSLT  149 (162)
Q Consensus        73 ~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-~~~~~y~~sKaa~~~l~  149 (162)
                      |||.....+  +.+.+.++|++.+++|+.+++.++++++|.|++++ |+||++||..+..+. ++...|+++|+++++|+
T Consensus       113 nAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~~~~Y~asKaa~~~l~  191 (297)
T 1xhl_A          113 NAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYACAKAALDQYT  191 (297)
T ss_dssp             CCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCCcchHHHHHHHHHHHH
Confidence            999876666  88899999999999999999999999999998766 999999999998888 88999999999999999


Q ss_pred             HHHHHHhccCCCC
Q 042185          150 DTLRLELGHFGID  162 (162)
Q Consensus       150 ~~l~~e~~~~gi~  162 (162)
                      +.++.|++++|||
T Consensus       192 ~~la~el~~~gI~  204 (297)
T 1xhl_A          192 RCTAIDLIQHGVR  204 (297)
T ss_dssp             HHHHHHHGGGTCE
T ss_pred             HHHHHHhcccCeE
Confidence            9999999999985

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=6.9e-35  Score=206.99  Aligned_cols=161  Identities=26%  Similarity=0.303  Sum_probs=149.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||++++++|+++|++|++++|+.+.++++.+  ..++.++.+|++|+++++++++++.++++++|++|||||...
T Consensus        13 Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~   92 (253)
T 1hxh_A           13 GGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILL   92 (253)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            899999999999999999999999999887766543  356889999999999999999999999999999999999877


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ..++.+.+.++|++.+++|+.+++.+++.++|.|++++ ++||++||..+..+.++...|+++|+++++|+++++.|+++
T Consensus        93 ~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~  171 (253)
T 1hxh_A           93 PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRK  171 (253)
T ss_dssp             CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHHHHHHHHHHHHHHHHhhh
Confidence            77888999999999999999999999999999998766 99999999999999999999999999999999999999998


Q ss_pred             C--CCC
Q 042185          159 F--GID  162 (162)
Q Consensus       159 ~--gi~  162 (162)
                      +  |||
T Consensus       172 ~~~gi~  177 (253)
T 1hxh_A          172 QGYAIR  177 (253)
T ss_dssp             HTCCEE
T ss_pred             cCCCeE
Confidence            7  764

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=4.7e-35  Score=210.27  Aligned_cols=162  Identities=28%  Similarity=0.349  Sum_probs=148.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||++|||+++|++|+++|++|++++|+.+.+++..+    ..++.++.+|++|+++++++++++.+.++++|++|||||.
T Consensus        36 Gas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~  115 (276)
T 2b4q_A           36 GGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGT  115 (276)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCSEEEECCCC
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence            899999999999999999999999999877665432    2367888999999999999999999999999999999998


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCC----CeEEEeccccccCCCCCch-hhhHhHHHHHHHHHH
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK----GKIINVGSVTVAAPGPWAG-TYTASKAALHSLTDT  151 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~----~~iv~isS~~~~~~~~~~~-~y~~sKaa~~~l~~~  151 (162)
                      ....++.+.+.++|++.+++|+.+++.++++++|.|++++.    ++||++||..+..+.+... .|+++|++++.|++.
T Consensus       116 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~  195 (276)
T 2b4q_A          116 SWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRM  195 (276)
T ss_dssp             CCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTTHHHHHHHHHHHHHH
T ss_pred             CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCccccHHHHHHHHHHHHH
Confidence            77778889999999999999999999999999999987665    8999999999998888888 999999999999999


Q ss_pred             HHHHhccCCCC
Q 042185          152 LRLELGHFGID  162 (162)
Q Consensus       152 l~~e~~~~gi~  162 (162)
                      ++.|++++|||
T Consensus       196 la~e~~~~gI~  206 (276)
T 2b4q_A          196 LAKELVGEHIN  206 (276)
T ss_dssp             HHHHHGGGTEE
T ss_pred             HHHHhcccCeE
Confidence            99999998875

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1e-34  Score=208.80  Aligned_cols=161  Identities=32%  Similarity=0.472  Sum_probs=147.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CC---ceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DP---RFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~---~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++.+     ..   ++.++.+|++|+++++++++++.++++++|++||
T Consensus        13 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~   92 (280)
T 1xkq_A           13 GSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVN   92 (280)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            899999999999999999999999999877665432     12   6889999999999999999999999999999999


Q ss_pred             CCCCCCCCC----CCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC-CCchhhhHhHHHHHH
Q 042185           73 NAGVQCVGP----LAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG-PWAGTYTASKAALHS  147 (162)
Q Consensus        73 ~ag~~~~~~----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-~~~~~y~~sKaa~~~  147 (162)
                      |||.....+    +.+.+.++|++.+++|+.+++.+++++.|.|++++ ++||++||..+..+. ++...|+++|+++++
T Consensus        93 nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~  171 (280)
T 1xkq_A           93 NAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQ  171 (280)
T ss_dssp             CCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCcccHHHHHHHHHHH
Confidence            999876666    77889999999999999999999999999997666 999999999998887 889999999999999


Q ss_pred             HHHHHHHHhccCCCC
Q 042185          148 LTDTLRLELGHFGID  162 (162)
Q Consensus       148 l~~~l~~e~~~~gi~  162 (162)
                      |+++++.|++++|||
T Consensus       172 ~~~~la~e~~~~gi~  186 (280)
T 1xkq_A          172 YTRSTAIDLAKFGIR  186 (280)
T ss_dssp             HHHHHHHHHHTTTCE
T ss_pred             HHHHHHHHhccCCeE
Confidence            999999999999985

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=9.5e-35  Score=206.98  Aligned_cols=161  Identities=17%  Similarity=0.272  Sum_probs=148.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||++|||++++++|+++|++|++++|+.+.+++..+       ..++.++.+|++|+++++.+++++.++++ +|++|||
T Consensus        14 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g-id~lv~~   92 (260)
T 2z1n_A           14 AGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG-ADILVYS   92 (260)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC-CSEEEEC
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC-CCEEEEC
Confidence            899999999999999999999999999876665432       22788999999999999999999999999 9999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      ||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|+++.+|++.++
T Consensus        93 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la  172 (260)
T 2z1n_A           93 TGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLA  172 (260)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHTHHHHHHHHHHH
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHHHHHHHHHHHHHH
Confidence            99877778888999999999999999999999999999988888999999999999999999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       173 ~e~~~~gi~  181 (260)
T 2z1n_A          173 LELAPHGVT  181 (260)
T ss_dssp             HHHGGGTEE
T ss_pred             HHHhhhCeE
Confidence            999998875

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=1.6e-34  Score=208.91  Aligned_cols=162  Identities=25%  Similarity=0.291  Sum_probs=147.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEe-cChhhHHhhhc------CCceeEEEeccCChH-----------------HHHHH
Q 042185            1 CSQGGIGHALARAFAASDCRVVATG-RSKATMADLEQ------DPRFFVQELDVLSEQ-----------------SVQNV   56 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~-r~~~~~~~~~~------~~~~~~~~~D~~~~~-----------------~i~~~   56 (162)
                      ||++|||++++++|+++|++|++++ |+.+.++++.+      ..++.++.+|+++++                 +++++
T Consensus        16 Gas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~v~~~   95 (291)
T 1e7w_A           16 GAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAEL   95 (291)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccchHHHHHHH
Confidence            8999999999999999999999999 99876655432      356889999999999                 99999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCC--------------hHHHHHHHHhhhhhHHHHHHHHHHhHhhcC------
Q 042185           57 LSNVLEKFGKIDVLVNNAGVQCVGPLAEVP--------------LSAMEQTFNTNVFGPMRLVQAVVPHMAYRK------  116 (162)
Q Consensus        57 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------  116 (162)
                      ++++.++++++|++|||||.....++.+.+              .++|+..+++|+.+++.++++++|.|++++      
T Consensus        96 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~~~~~  175 (291)
T 1e7w_A           96 VAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGT  175 (291)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCS
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCC
Confidence            999999999999999999987777888888              999999999999999999999999998766      


Q ss_pred             CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccCCCC
Q 042185          117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       117 ~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~gi~  162 (162)
                      .++||++||..+..+.++...|+++|+++.+|+++++.|++++|||
T Consensus       176 ~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~  221 (291)
T 1e7w_A          176 NYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIR  221 (291)
T ss_dssp             CEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             CcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeE
Confidence            6899999999999999999999999999999999999999999885

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=1e-34  Score=207.77  Aligned_cols=162  Identities=26%  Similarity=0.410  Sum_probs=148.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEe-cChhhHHhhh-----cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATG-RSKATMADLE-----QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~-r~~~~~~~~~-----~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|++++ ++.+..++..     ...++.++.+|++|.++++++++++.++++++|++||||
T Consensus        32 Gas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nA  111 (269)
T 3gk3_A           32 GGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDVLINNA  111 (269)
T ss_dssp             TTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            8999999999999999999999998 5544443322     136789999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |+....++.+.+.++|+..+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|+++++|+++++.
T Consensus       112 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~  191 (269)
T 3gk3_A          112 GITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLAL  191 (269)
T ss_dssp             CCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHHHHHHHHHHHHHH
Confidence            99888888999999999999999999999999999999888889999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       192 e~~~~gi~  199 (269)
T 3gk3_A          192 ETAKRGIT  199 (269)
T ss_dssp             HHGGGTEE
T ss_pred             HhhhcCCE
Confidence            99998875

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=4.3e-35  Score=209.45  Aligned_cols=156  Identities=32%  Similarity=0.443  Sum_probs=145.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||++|||+++|++|+++|++|++++|+.+..+..      ..+.+|+++.++++.+++++.++++++|++|||||.....
T Consensus        35 Gas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~------~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~  108 (266)
T 3uxy_A           35 GAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD------LHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRG  108 (266)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCS------EECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCB
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhh------hccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence            8999999999999999999999999987654322      3458999999999999999999999999999999998888


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccCC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG  160 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~g  160 (162)
                      ++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|++||+++++|+++++.|++++|
T Consensus       109 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~g  188 (266)
T 3uxy_A          109 RITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQG  188 (266)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHHHHHHHHHHHHHHHHhhhcC
Confidence            88999999999999999999999999999999988889999999999999999999999999999999999999999998


Q ss_pred             CC
Q 042185          161 ID  162 (162)
Q Consensus       161 i~  162 (162)
                      ||
T Consensus       189 I~  190 (266)
T 3uxy_A          189 IR  190 (266)
T ss_dssp             EE
T ss_pred             cE
Confidence            85

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=1.4e-34  Score=207.85  Aligned_cols=162  Identities=30%  Similarity=0.392  Sum_probs=149.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||++++++|+++|++|++++|+.+.++++.+     ..++.++.+|++|.++++.+++++.++++++|++|||||
T Consensus        29 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~~Ag  108 (277)
T 2rhc_B           29 GATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG  108 (277)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence            899999999999999999999999999876654432     356889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHh--HhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH--MAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      .....++.+.+.++|++.+++|+.+++.++++++|.  |++++.++||++||..+..+.+....|+++|++++.|+++++
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la  188 (277)
T 2rhc_B          109 RPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALG  188 (277)
T ss_dssp             CCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHHHHHHHHHHHHHHHH
Confidence            877778888999999999999999999999999999  887777999999999999999999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       189 ~e~~~~gi~  197 (277)
T 2rhc_B          189 LELARTGIT  197 (277)
T ss_dssp             HHHTTTEEE
T ss_pred             HHHHHhCcE
Confidence            999998875

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=2.6e-34  Score=204.66  Aligned_cols=162  Identities=28%  Similarity=0.384  Sum_probs=148.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||++++++|+++|++|++++|+.+.+++..+     ...+.++.+|++|.++++.+++++.+.++++|++|||||
T Consensus        21 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag  100 (260)
T 2zat_A           21 ASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAA  100 (260)
T ss_dssp             SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            899999999999999999999999999876654422     356888999999999999999999999999999999999


Q ss_pred             CCC-CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           76 VQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        76 ~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      ... ..++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..++.+.++...|+++|+++++|++.++.
T Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~  180 (260)
T 2zat_A          101 VNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAV  180 (260)
T ss_dssp             CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHHHHHHHHHHHHHHH
Confidence            764 4677889999999999999999999999999999887789999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       181 e~~~~gi~  188 (260)
T 2zat_A          181 ELAPRNIR  188 (260)
T ss_dssp             HHGGGTEE
T ss_pred             HhcccCeE
Confidence            99998875

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.1e-34  Score=206.68  Aligned_cols=158  Identities=30%  Similarity=0.481  Sum_probs=145.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||++|||+++|++|+++|++|++++|+.+...    +..+.++.+|++|+++++++++++.+++|++|++|||||.....
T Consensus        35 Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~  110 (260)
T 3un1_A           35 GASQGIGAGLVRAYRDRNYRVVATSRSIKPSA----DPDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAK  110 (260)
T ss_dssp             SCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS----STTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc----cCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC
Confidence            89999999999999999999999999865432    24688999999999999999999999999999999999998888


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC--CCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP--GPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+  .++...|++||+++++|+++++.|+++
T Consensus       111 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~  190 (260)
T 3un1_A          111 PFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSR  190 (260)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHHHHHHHHHHHHHHHHHhCc
Confidence            889999999999999999999999999999999888899999999877643  445688999999999999999999999


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +|||
T Consensus       191 ~gI~  194 (260)
T 3un1_A          191 SGVR  194 (260)
T ss_dssp             TTEE
T ss_pred             CCeE
Confidence            9885

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=3.6e-34  Score=202.94  Aligned_cols=157  Identities=30%  Similarity=0.402  Sum_probs=146.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||++|||++++++|+++|++|++++|+.+.     .+..+.++.+|++|+++++++++++.++++++|++|||||.....
T Consensus        14 Gas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~   88 (250)
T 2fwm_X           14 GAGKGIGYATALAFVEAGAKVTGFDQAFTQ-----EQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMG   88 (250)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESCCCS-----SCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCchhh-----hcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCC
Confidence            899999999999999999999999998652     112378889999999999999999999999999999999987777


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccCC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG  160 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~g  160 (162)
                      ++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+++|++++.|+++++.|++++|
T Consensus        89 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g  168 (250)
T 2fwm_X           89 ATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSG  168 (250)
T ss_dssp             CTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             CcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHHHHHHHHHHHHHHhCccC
Confidence            88899999999999999999999999999999888889999999999999999999999999999999999999999998


Q ss_pred             CC
Q 042185          161 ID  162 (162)
Q Consensus       161 i~  162 (162)
                      ||
T Consensus       169 i~  170 (250)
T 2fwm_X          169 VR  170 (250)
T ss_dssp             CE
T ss_pred             CE
Confidence            85

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-34  Score=207.64  Aligned_cols=161  Identities=31%  Similarity=0.474  Sum_probs=139.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      ||++|||++++++|+++|++|++++|+.+.++++.+        ..++.++.+|++|+++++.+++++.++++++|++||
T Consensus        13 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   92 (278)
T 1spx_A           13 GSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVN   92 (278)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            899999999999999999999999999877665432        236788999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCC----ChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccc-cCCCCCchhhhHhHHHHHH
Q 042185           73 NAGVQCVGPLAEV----PLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTV-AAPGPWAGTYTASKAALHS  147 (162)
Q Consensus        73 ~ag~~~~~~~~~~----~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~-~~~~~~~~~y~~sKaa~~~  147 (162)
                      |||.....++.+.    +.++|+..+++|+.+++.++++++|.|++++ ++||++||..+ ..+.++...|+++|+++++
T Consensus        93 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~  171 (278)
T 1spx_A           93 NAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYYSIAKAAIDQ  171 (278)
T ss_dssp             CCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCccHHHHHHHHHHH
Confidence            9998766677777    9999999999999999999999999997765 89999999998 8888999999999999999


Q ss_pred             HHHHHHHHhccCCCC
Q 042185          148 LTDTLRLELGHFGID  162 (162)
Q Consensus       148 l~~~l~~e~~~~gi~  162 (162)
                      |+++++.|++++|||
T Consensus       172 ~~~~la~e~~~~gi~  186 (278)
T 1spx_A          172 YTRNTAIDLIQHGIR  186 (278)
T ss_dssp             HHHHHHHHHGGGTCE
T ss_pred             HHHHHHHHHHhcCcE
Confidence            999999999999885

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.5e-35  Score=208.32  Aligned_cols=160  Identities=27%  Similarity=0.397  Sum_probs=145.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEe-cChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATG-RSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~-r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|++++ |+.+..+++.+     ..++.++.+|++|+++++++++++.++++++|++||||
T Consensus        34 Gas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnA  113 (267)
T 3u5t_A           34 GASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNA  113 (267)
T ss_dssp             SCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            8999999999999999999998874 55544444322     35788999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |+....++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.+....|++||+++++|+++++.
T Consensus       114 G~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~  191 (267)
T 3u5t_A          114 GIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV--GGRIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSK  191 (267)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeChhhccCCCCchHHHHHHHHHHHHHHHHHH
Confidence            9988888999999999999999999999999999999954  48999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       192 e~~~~gI~  199 (267)
T 3u5t_A          192 ELRGRDIT  199 (267)
T ss_dssp             HTTTSCCE
T ss_pred             HhhhhCCE
Confidence            99999986

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=1.4e-34  Score=206.90  Aligned_cols=158  Identities=27%  Similarity=0.387  Sum_probs=144.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||++|||+++|++|+++|++|++++|+.+.+++..+       ...+.++.+|++++++++.++    ++++++|++|||
T Consensus        17 Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~----~~~g~id~lv~n   92 (267)
T 3t4x_A           17 GSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVI----EKYPKVDILINN   92 (267)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHH----HHCCCCSEEEEC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHH----HhcCCCCEEEEC
Confidence            899999999999999999999999999877665432       356788999999999887765    457999999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      ||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|+++|+++++|+++++
T Consensus        93 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la  172 (267)
T 3t4x_A           93 LGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLA  172 (267)
T ss_dssp             CCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHHHHHHHHHHHHHHHH
Confidence            99988888899999999999999999999999999999988888999999999999999999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       173 ~e~~~~gi~  181 (267)
T 3t4x_A          173 ELTTGTNVT  181 (267)
T ss_dssp             HHTTTSEEE
T ss_pred             HHhCCCCeE
Confidence            999999875

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=3.2e-34  Score=205.30  Aligned_cols=160  Identities=22%  Similarity=0.329  Sum_probs=144.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecC-hhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRS-KATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~-~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|++++++ .+..+++.+     ..++.++.+|++|+++++++++++.++++++|++||||
T Consensus        25 Gas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnA  104 (270)
T 3is3_A           25 GSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNS  104 (270)
T ss_dssp             CTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCC
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            899999999999999999999998765 444443322     36788999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccc-ccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVT-VAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      |.....++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||.. ...+.++...|+++|+++++|+++++
T Consensus       105 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la  182 (270)
T 3is3_A          105 GVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFS  182 (270)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTTTTCCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchhccCCCCCCchhHHHHHHHHHHHHHHH
Confidence            9988888999999999999999999999999999999954  68999999988 56788899999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       183 ~e~~~~gi~  191 (270)
T 3is3_A          183 KDCGDKKIT  191 (270)
T ss_dssp             HHHGGGTCE
T ss_pred             HHhcccCeE
Confidence            999999986

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=2.4e-34  Score=204.36  Aligned_cols=162  Identities=25%  Similarity=0.414  Sum_probs=147.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhh--HHhhhc-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKAT--MADLEQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~--~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      ||++|||++++++|+++|++|++++|+.+.  .+++.. ..++.++.+|++|+++++++++++.++++++|++|||||..
T Consensus        11 Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~   90 (255)
T 2q2v_A           11 GSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQ   90 (255)
T ss_dssp             SCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            899999999999999999999999998651  222222 35688899999999999999999999999999999999987


Q ss_pred             CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhc
Q 042185           78 CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                      ...++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+....|+++|+++++|+++++.|++
T Consensus        91 ~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~  170 (255)
T 2q2v_A           91 HVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETA  170 (255)
T ss_dssp             CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHHHHHHHHHHHHHhc
Confidence            77788889999999999999999999999999999887789999999999999999999999999999999999999999


Q ss_pred             cCCCC
Q 042185          158 HFGID  162 (162)
Q Consensus       158 ~~gi~  162 (162)
                      ++|||
T Consensus       171 ~~gi~  175 (255)
T 2q2v_A          171 TSNVT  175 (255)
T ss_dssp             TSSEE
T ss_pred             ccCcE
Confidence            98875

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=3.3e-34  Score=211.56  Aligned_cols=161  Identities=23%  Similarity=0.311  Sum_probs=147.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHH-----------hhhc-CCceeEEEeccCChHHHHHHHHHHHHHcCCcc
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMA-----------DLEQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKID   68 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~-----------~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id   68 (162)
                      ||++|||+++|++|+++|++|++++|+.+..+           ++.. ..++.++.+|++|+++++++++++.+++|++|
T Consensus        52 Gas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  131 (346)
T 3kvo_A           52 GASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGID  131 (346)
T ss_dssp             TTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            89999999999999999999999999876421           1111 35788999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC--CCCchhhhHhHHHHH
Q 042185           69 VLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP--GPWAGTYTASKAALH  146 (162)
Q Consensus        69 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~~~y~~sKaa~~  146 (162)
                      ++|||||.....++.+.+.++|+.++++|+.+++.++++++|.|++++.++||++||..+..+  .+....|+++|++++
T Consensus       132 ilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~~~~~Y~aSKaal~  211 (346)
T 3kvo_A          132 ILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMS  211 (346)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTSSSHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCCCchHHHHHHHHHH
Confidence            999999998888899999999999999999999999999999999888899999999998887  788999999999999


Q ss_pred             HHHHHHHHHhccCCCC
Q 042185          147 SLTDTLRLELGHFGID  162 (162)
Q Consensus       147 ~l~~~l~~e~~~~gi~  162 (162)
                      +|+++++.|++ .|||
T Consensus       212 ~l~~~la~e~~-~gIr  226 (346)
T 3kvo_A          212 MYVLGMAEEFK-GEIA  226 (346)
T ss_dssp             HHHHHHHHHTT-TTCE
T ss_pred             HHHHHHHHHhc-CCcE
Confidence            99999999999 8875

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.8e-34  Score=210.41  Aligned_cols=162  Identities=30%  Similarity=0.488  Sum_probs=146.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecC-----hhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRS-----KATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVL   70 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~-----~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~v   70 (162)
                      ||++|||+++|++|+++|++|++++|+     .+.++++.+     ...+.++.+|++|+++++++++++.+++|++|++
T Consensus        12 Gas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~iD~l   91 (324)
T 3u9l_A           12 GASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGEDGRIDVL   91 (324)
T ss_dssp             SCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence            899999999999999999999988876     333333322     4678999999999999999999999999999999


Q ss_pred             EECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC-CCCCchhhhHhHHHHHHHH
Q 042185           71 VNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA-PGPWAGTYTASKAALHSLT  149 (162)
Q Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-~~~~~~~y~~sKaa~~~l~  149 (162)
                      |||||+...+++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+.. +.+....|++||+++++|+
T Consensus        92 VnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~asKaa~~~~~  171 (324)
T 3u9l_A           92 IHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIA  171 (324)
T ss_dssp             EECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHHHHHHHHHHHHHH
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchhHHHHHHHHHHHH
Confidence            999999888889999999999999999999999999999999988889999999998884 4567889999999999999


Q ss_pred             HHHHHHhccCCCC
Q 042185          150 DTLRLELGHFGID  162 (162)
Q Consensus       150 ~~l~~e~~~~gi~  162 (162)
                      ++++.|++++|||
T Consensus       172 ~~la~el~~~gI~  184 (324)
T 3u9l_A          172 VQYARELSRWGIE  184 (324)
T ss_dssp             HHHHHHHHTTTEE
T ss_pred             HHHHHHhhhhCcE
Confidence            9999999999875

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=3.1e-34  Score=202.76  Aligned_cols=162  Identities=28%  Similarity=0.394  Sum_probs=147.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc------CCceeEEEecc--CChHHHHHHHHHHHHHcCCccEEEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ------DPRFFVQELDV--LSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~------~~~~~~~~~D~--~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++.+      .....++.+|+  ++.++++.+++++.+.++++|++||
T Consensus        21 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~id~lv~  100 (247)
T 3i1j_A           21 GAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLH  100 (247)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            899999999999999999999999999887766533      14566777777  9999999999999999999999999


Q ss_pred             CCCCC-CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHH
Q 042185           73 NAGVQ-CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDT  151 (162)
Q Consensus        73 ~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~  151 (162)
                      |||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+++|+++++|+++
T Consensus       101 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~  180 (247)
T 3i1j_A          101 NASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQT  180 (247)
T ss_dssp             CCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             CCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchhHHHHHHHHHHHHH
Confidence            99985 45678899999999999999999999999999999888889999999999999999999999999999999999


Q ss_pred             HHHHhcc-CCCC
Q 042185          152 LRLELGH-FGID  162 (162)
Q Consensus       152 l~~e~~~-~gi~  162 (162)
                      ++.|+++ .|||
T Consensus       181 la~e~~~~~~i~  192 (247)
T 3i1j_A          181 LADELEGVTAVR  192 (247)
T ss_dssp             HHHHHTTTSSEE
T ss_pred             HHHHhcCCCCeE
Confidence            9999976 7764

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=3.2e-34  Score=205.76  Aligned_cols=161  Identities=25%  Similarity=0.311  Sum_probs=142.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEec-ChhhHHhhhc------CCceeEEEeccCCh----HHHHHHHHHHHHHcCCccE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGR-SKATMADLEQ------DPRFFVQELDVLSE----QSVQNVLSNVLEKFGKIDV   69 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r-~~~~~~~~~~------~~~~~~~~~D~~~~----~~i~~~~~~~~~~~~~id~   69 (162)
                      ||++|||++++++|+++|++|++++| +.+.++++.+      ..++.++.+|++|.    ++++.+++++.+.++++|+
T Consensus        18 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~g~id~   97 (276)
T 1mxh_A           18 GGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDV   97 (276)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHHhcCCCCE
Confidence            89999999999999999999999999 8776655432      35688999999999    9999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCCh-----------HHHHHHHHhhhhhHHHHHHHHHHhHhhcCC------CeEEEeccccccCCC
Q 042185           70 LVNNAGVQCVGPLAEVPL-----------SAMEQTFNTNVFGPMRLVQAVVPHMAYRKK------GKIINVGSVTVAAPG  132 (162)
Q Consensus        70 vi~~ag~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~------~~iv~isS~~~~~~~  132 (162)
                      +|||||.....++.+.+.           ++|++.+++|+.+++.++++++|.|+ ++.      ++||++||..+..+.
T Consensus        98 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~iv~isS~~~~~~~  176 (276)
T 1mxh_A           98 LVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNLSVVNLCDAMTDLPL  176 (276)
T ss_dssp             EEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEEEEECCGGGGSCC
T ss_pred             EEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCcEEEEECchhhcCCC
Confidence            999999877777888888           99999999999999999999999997 444      899999999999999


Q ss_pred             CCchhhhHhHHHHHHHHHHHHHHhccCCCC
Q 042185          133 PWAGTYTASKAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       133 ~~~~~y~~sKaa~~~l~~~l~~e~~~~gi~  162 (162)
                      ++...|+++|+++++|+++++.|++++|||
T Consensus       177 ~~~~~Y~asK~a~~~l~~~la~e~~~~gi~  206 (276)
T 1mxh_A          177 PGFCVYTMAKHALGGLTRAAALELAPRHIR  206 (276)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             CCCeehHHHHHHHHHHHHHHHHHHhhcCeE
Confidence            999999999999999999999999998875

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=1.6e-34  Score=204.50  Aligned_cols=156  Identities=29%  Similarity=0.369  Sum_probs=136.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||++|||++++++|+++|++|++++|+.+..+++.      .+.+|++|+++++.+++++.+.++++|++|||||.....
T Consensus        22 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~------~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~   95 (247)
T 1uzm_A           22 GGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF------GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADA   95 (247)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE------EEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC--
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc------CeeccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence            89999999999999999999999999876554332      388999999999999999999999999999999988777


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccCC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG  160 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~g  160 (162)
                      ++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.+....|+++|++++.|++.++.|++++|
T Consensus        96 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g  175 (247)
T 1uzm_A           96 FLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKAN  175 (247)
T ss_dssp             ---CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHHHHHHHHHHHHHHHhhhcC
Confidence            88899999999999999999999999999999887789999999999999989999999999999999999999999988


Q ss_pred             CC
Q 042185          161 ID  162 (162)
Q Consensus       161 i~  162 (162)
                      ||
T Consensus       176 i~  177 (247)
T 1uzm_A          176 VT  177 (247)
T ss_dssp             EE
T ss_pred             cE
Confidence            75

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.9e-34  Score=206.27  Aligned_cols=158  Identities=22%  Similarity=0.298  Sum_probs=141.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecC------------hhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHH
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRS------------KATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEK   63 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~------------~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~   63 (162)
                      ||++|||+++|++|+++|++|++++|+            .+.+++...     ..++.++.+|++|+++++++++++.++
T Consensus        20 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   99 (278)
T 3sx2_A           20 GAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAALQAGLDE   99 (278)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            899999999999999999999999987            444443322     467899999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCC----CCchhh
Q 042185           64 FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPG----PWAGTY  138 (162)
Q Consensus        64 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~----~~~~~y  138 (162)
                      ++++|++|||||+.....    +.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+..+.    ++...|
T Consensus       100 ~g~id~lv~nAg~~~~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~Y  175 (278)
T 3sx2_A          100 LGRLDIVVANAGIAPMSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGY  175 (278)
T ss_dssp             HCCCCEEEECCCCCCCSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCSSHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccCCCCchHh
Confidence            999999999999865432    5899999999999999999999999998765 7899999999998876    677889


Q ss_pred             hHhHHHHHHHHHHHHHHhccCCCC
Q 042185          139 TASKAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       139 ~~sKaa~~~l~~~l~~e~~~~gi~  162 (162)
                      ++||+++++|+++++.|++++|||
T Consensus       176 ~asKaa~~~~~~~la~e~~~~gi~  199 (278)
T 3sx2_A          176 VAAKHGVVGLMRVYANLLAGQMIR  199 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             HHHHHHHHHHHHHHHHHHhccCcE
Confidence            999999999999999999999885

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=2.6e-34  Score=205.86  Aligned_cols=162  Identities=20%  Similarity=0.257  Sum_probs=148.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh-hhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK-ATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~-~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|++++|+. +..+.+.+     ..++.++.+|+++.++++++++++.+.++++|++||||
T Consensus        36 Gas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~nA  115 (271)
T 4iin_A           36 GASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNA  115 (271)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            8999999999999999999999999954 33333322     35789999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|++++.|+++++.
T Consensus       116 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~  195 (271)
T 4iin_A          116 GVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAY  195 (271)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhHHHHHHHHHHHHHHHH
Confidence            99888888899999999999999999999999999999988889999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       196 e~~~~gi~  203 (271)
T 4iin_A          196 EGALRNIR  203 (271)
T ss_dssp             HHHTTTEE
T ss_pred             HHHHhCcE
Confidence            99998875

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.2e-34  Score=202.57  Aligned_cols=159  Identities=28%  Similarity=0.390  Sum_probs=145.8

Q ss_pred             CCCCchHHHHHHHHHHCC--CeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASD--CRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g--~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||++|||+++|++|+++|  +.|++++|+.+.++++.+  ..++.++.+|++|+++++++++++.+++|++|++|||||.
T Consensus         9 Gas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~   88 (254)
T 3kzv_A            9 GVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGV   88 (254)
T ss_dssp             STTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEEECCC
T ss_pred             CCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccEEEECCcc
Confidence            899999999999999985  789999999888776654  3578899999999999999999999999999999999998


Q ss_pred             CC-CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           77 QC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        77 ~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .. ..++.+.+.++|++.+++|+.+++.++++++|.|++++ |+||++||..+..+.++...|++||+++++|+++++.|
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e  167 (254)
T 3kzv_A           89 LEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE  167 (254)
T ss_dssp             CCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHHHHHHHHHHHHHHhh
Confidence            54 47888999999999999999999999999999998765 99999999999999999999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      +  .|||
T Consensus       168 ~--~~i~  172 (254)
T 3kzv_A          168 E--RQVK  172 (254)
T ss_dssp             C--TTSE
T ss_pred             c--cCcE
Confidence            8  5664

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=7e-34  Score=203.70  Aligned_cols=160  Identities=28%  Similarity=0.406  Sum_probs=143.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh-hhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK-ATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~-~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|++++++. +..+++.+     ..++.++.+|++|+++++++++++.+++|++|++||||
T Consensus        38 Gas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnA  117 (271)
T 3v2g_A           38 GGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSA  117 (271)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECC
Confidence            8999999999999999999999986654 44443322     46788999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC-CCCchhhhHhHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP-GPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      |.....++.+.+.++|++.+++|+.+++.+++++.|.|++  .|+||++||..+..+ .++...|+++|+++++|+++++
T Consensus       118 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la  195 (271)
T 3v2g_A          118 GIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD--GGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLA  195 (271)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGGGTCCCSTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChhhccCCCCCchHHHHHHHHHHHHHHHHH
Confidence            9988888999999999999999999999999999999853  689999999777654 7889999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       196 ~e~~~~gIr  204 (271)
T 3v2g_A          196 RDLGPRGIT  204 (271)
T ss_dssp             HHHGGGTCE
T ss_pred             HHhhhhCeE
Confidence            999999986

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=8.3e-34  Score=202.61  Aligned_cols=155  Identities=25%  Similarity=0.436  Sum_probs=145.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||++|||++++++|+++|++|++++|+.+.      ..++.++.+|++|.++++.+++++.++++++|++|||||.....
T Consensus        15 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~   88 (264)
T 2dtx_A           15 GASMGIGRAIAERFVDEGSKVIDLSIHDPG------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYG   88 (264)
T ss_dssp             SCSSHHHHHHHHHHHHTTCEEEEEESSCCC------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCB
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEecCccc------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence            899999999999999999999999998654      35678899999999999999999999999999999999988777


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccCC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG  160 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~g  160 (162)
                      ++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+++|++++.|+++++.|+++. 
T Consensus        89 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-  167 (264)
T 2dtx_A           89 KIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL-  167 (264)
T ss_dssp             CTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHTTT-
T ss_pred             CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHHHHHHHHHHHHHHhcCC-
Confidence            8889999999999999999999999999999988778999999999999999999999999999999999999999876 


Q ss_pred             CC
Q 042185          161 ID  162 (162)
Q Consensus       161 i~  162 (162)
                      ||
T Consensus       168 i~  169 (264)
T 2dtx_A          168 LR  169 (264)
T ss_dssp             SE
T ss_pred             cE
Confidence            64

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-34  Score=206.64  Aligned_cols=159  Identities=26%  Similarity=0.348  Sum_probs=144.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC--CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||++++++|+++|++|++++|+.+.+++..++  .++.++.+|++|.++++.+++++.++++++|++|||||...
T Consensus        13 Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~   92 (263)
T 2a4k_A           13 GAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAH   92 (263)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTT
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCC
Confidence            8999999999999999999999999998887776554  46888999999999999999999999999999999999877


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ..++.+.+.++|++.+++|+.+++.+++++.|.| ++ .++||++||..+. +.++...|+++|+++++|+++++.|+++
T Consensus        93 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~-~~~~~~~Y~asK~a~~~~~~~la~e~~~  169 (263)
T 2a4k_A           93 SALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL-GAFGLAHYAAGKLGVVGLARTLALELAR  169 (263)
T ss_dssp             TTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC-CHHHHHHHHHCSSHHHHHHHHHHHHHTT
T ss_pred             CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc-CCCCcHHHHHHHHHHHHHHHHHHHHhhh
Confidence            7788889999999999999999999999999999 44 7899999999988 7778889999999999999999999999


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +|||
T Consensus       170 ~gi~  173 (263)
T 2a4k_A          170 KGVR  173 (263)
T ss_dssp             TTCE
T ss_pred             hCcE
Confidence            9985

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.3e-34  Score=204.69  Aligned_cols=161  Identities=29%  Similarity=0.460  Sum_probs=147.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC-
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC-   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~-   78 (162)
                      ||++|||++++++|+++|++|++++|+.+..+++.++ ..+.++.+|++|+++++++++++.++++++|++|||||... 
T Consensus        16 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~   95 (270)
T 1yde_A           16 GGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPP   95 (270)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence            8999999999999999999999999998877665432 34788999999999999999999999999999999999864 


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ..++.+.+.++|++.+++|+.+++.+++++.|.|+++ .++||++||..+..+.+....|+++|+++++|+++++.|+++
T Consensus        96 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~  174 (270)
T 1yde_A           96 PQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESP  174 (270)
T ss_dssp             CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCCCCcccHHHHHHHHHHHHHHHHHhhh
Confidence            3678889999999999999999999999999999765 589999999999888899999999999999999999999999


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +|||
T Consensus       175 ~gi~  178 (270)
T 1yde_A          175 YGVR  178 (270)
T ss_dssp             GTCE
T ss_pred             hCcE
Confidence            9985

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=4e-34  Score=207.30  Aligned_cols=160  Identities=19%  Similarity=0.242  Sum_probs=144.4

Q ss_pred             CCCC--chHHHHHHHHHHCCCeEEEEecChhhHHhhhc----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQG--GIGHALARAFAASDCRVVATGRSKATMADLEQ----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~--giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+|  |||+++|++|+++|++|++++|+.+..+.+..    .....++.+|++|+++++++++++.+++|++|++||||
T Consensus        37 Gasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnA  116 (296)
T 3k31_A           37 GVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGSLDFVVHAV  116 (296)
T ss_dssp             CCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred             eCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            6765  99999999999999999999999754333221    24568999999999999999999999999999999999


Q ss_pred             CCCCC----CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           75 GVQCV----GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        75 g~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      |+...    .++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.+....|++||+++++|++
T Consensus       117 G~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~  194 (296)
T 3k31_A          117 AFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYGAEKVVPHYNVMGVCKAALEASVK  194 (296)
T ss_dssp             CCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTTHHHHHHHHHHHHHH
T ss_pred             CcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhhccCCCCchhhHHHHHHHHHHHH
Confidence            98754    67889999999999999999999999999999865  6899999999999999999999999999999999


Q ss_pred             HHHHHhccCCCC
Q 042185          151 TLRLELGHFGID  162 (162)
Q Consensus       151 ~l~~e~~~~gi~  162 (162)
                      +++.|++++|||
T Consensus       195 ~la~e~~~~gIr  206 (296)
T 3k31_A          195 YLAVDLGKQQIR  206 (296)
T ss_dssp             HHHHHHHTTTEE
T ss_pred             HHHHHHhhcCcE
Confidence            999999999885

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=8.3e-34  Score=199.09  Aligned_cols=162  Identities=30%  Similarity=0.398  Sum_probs=150.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      ||+||||++++++|+++|++|++++|+.+.++++..+ .++.++.+|++|.++++++++++.+.++++|++|||||....
T Consensus        12 GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~   91 (234)
T 2ehd_A           12 GASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVM   91 (234)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC
Confidence            8999999999999999999999999998877665442 267889999999999999999999999999999999998777


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccC
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHF  159 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~  159 (162)
                      .++.+.+.++|+..+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|++++.|++.++.|++++
T Consensus        92 ~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~  171 (234)
T 2ehd_A           92 KPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREA  171 (234)
T ss_dssp             SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHHHHHHHHHHHHHhhc
Confidence            78888999999999999999999999999999988778999999999999998999999999999999999999999998


Q ss_pred             CCC
Q 042185          160 GID  162 (162)
Q Consensus       160 gi~  162 (162)
                      |||
T Consensus       172 gi~  174 (234)
T 2ehd_A          172 NVR  174 (234)
T ss_dssp             TEE
T ss_pred             CcE
Confidence            875

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=5.4e-35  Score=208.53  Aligned_cols=160  Identities=21%  Similarity=0.295  Sum_probs=140.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh---hhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK---ATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~---~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      ||++|||+++|++|+++|++|++++|+.   +.++++.+     ..++.++.+|++|+++++++++++.++++++|++||
T Consensus        18 Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn   97 (262)
T 3ksu_A           18 GGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAIN   97 (262)
T ss_dssp             TCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            8999999999999999999999987753   33333322     357889999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHH
Q 042185           73 NAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTL  152 (162)
Q Consensus        73 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l  152 (162)
                      |||.....++.+.+.++|++.+++|+.+++.++++++|.|  ++.|+||++||..+..+.+....|+++|+++.+|++++
T Consensus        98 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m--~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~l  175 (262)
T 3ksu_A           98 TVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHM--NPNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAA  175 (262)
T ss_dssp             CCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTE--EEEEEEEEECCCHHHHHHCCCCC-----CHHHHHHHHH
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhh--cCCCEEEEEechhhccCCCCCchhHHHHHHHHHHHHHH
Confidence            9999888889999999999999999999999999999999  34589999999999988889999999999999999999


Q ss_pred             HHHhccCCCC
Q 042185          153 RLELGHFGID  162 (162)
Q Consensus       153 ~~e~~~~gi~  162 (162)
                      +.|++++|||
T Consensus       176 a~e~~~~gi~  185 (262)
T 3ksu_A          176 SKELMKQQIS  185 (262)
T ss_dssp             HHHTTTTTCE
T ss_pred             HHHHHHcCcE
Confidence            9999999986

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=9.3e-35  Score=206.36  Aligned_cols=156  Identities=30%  Similarity=0.396  Sum_probs=142.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||++|||++++++|+++|++|++++|+.+.++      .+.++.+|++|+++++++++++.++++++|++|||||.....
T Consensus        28 Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~  101 (253)
T 2nm0_A           28 GGNRGIGLAIARAFADAGDKVAITYRSGEPPE------GFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQ  101 (253)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------TSEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEECSCCTTT
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc------cceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence            89999999999999999999999999876543      277899999999999999999999999999999999988777


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccCC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG  160 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~g  160 (162)
                      ++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.+....|+++|++++.|++.++.|+++.|
T Consensus       102 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~g  181 (253)
T 2nm0_A          102 LLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRN  181 (253)
T ss_dssp             C---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCSSS
T ss_pred             ChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence            88889999999999999999999999999999887889999999999988888889999999999999999999999998


Q ss_pred             CC
Q 042185          161 ID  162 (162)
Q Consensus       161 i~  162 (162)
                      ||
T Consensus       182 i~  183 (253)
T 2nm0_A          182 IT  183 (253)
T ss_dssp             EE
T ss_pred             eE
Confidence            75

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=3.7e-34  Score=203.08  Aligned_cols=159  Identities=28%  Similarity=0.356  Sum_probs=136.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++..     ..++.++.+|++|+++++++++++.+.++++|++|||||
T Consensus        16 Gas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag   95 (253)
T 3qiv_A           16 GSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAA   95 (253)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            899999999999999999999999999887766543     367889999999999999999999999999999999999


Q ss_pred             CC---CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHH
Q 042185           76 VQ---CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTL  152 (162)
Q Consensus        76 ~~---~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l  152 (162)
                      ..   ...++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..++   ++...|+++|+++++|++++
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y~asK~a~~~~~~~l  172 (253)
T 3qiv_A           96 IFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYGLAKVGINGLTQQL  172 (253)
T ss_dssp             CCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------CCHHHHHHHHHHH
T ss_pred             cCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchhHHHHHHHHHHHHHH
Confidence            83   4456778999999999999999999999999999998888999999998877   45577999999999999999


Q ss_pred             HHHhccCCCC
Q 042185          153 RLELGHFGID  162 (162)
Q Consensus       153 ~~e~~~~gi~  162 (162)
                      +.|++++|||
T Consensus       173 a~e~~~~gi~  182 (253)
T 3qiv_A          173 SRELGGRNIR  182 (253)
T ss_dssp             HHHTTTTTEE
T ss_pred             HHHHhhcCeE
Confidence            9999998875

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-33  Score=199.96  Aligned_cols=158  Identities=29%  Similarity=0.433  Sum_probs=143.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||++|||++++++|+++|++|++++|+.+.++++.+..++.++.+|++|+++++    ++.+.++++|++|||||.....
T Consensus        13 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~----~~~~~~~~id~lv~~Ag~~~~~   88 (246)
T 2ag5_A           13 AAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQID----QFANEVERLDVLFNVAGFVHHG   88 (246)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHH----HHHHHCSCCSEEEECCCCCCCB
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHH----HHHHHhCCCCEEEECCccCCCC
Confidence            899999999999999999999999999887776652236889999999999888    4455678999999999988777


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCC-CchhhhHhHHHHHHHHHHHHHHhccC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGP-WAGTYTASKAALHSLTDTLRLELGHF  159 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-~~~~y~~sKaa~~~l~~~l~~e~~~~  159 (162)
                      ++.+.+.++|+..+++|+.+++.++++++|.|++++.++||++||..+..+.+ +...|+++|++++.|+++++.|++++
T Consensus        89 ~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~  168 (246)
T 2ag5_A           89 TVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQ  168 (246)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHHHHHHHHHHHHHHhhhc
Confidence            88889999999999999999999999999999888889999999999988877 88999999999999999999999998


Q ss_pred             CCC
Q 042185          160 GID  162 (162)
Q Consensus       160 gi~  162 (162)
                      |||
T Consensus       169 gi~  171 (246)
T 2ag5_A          169 GIR  171 (246)
T ss_dssp             TEE
T ss_pred             CcE
Confidence            875

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=5e-34  Score=209.43  Aligned_cols=162  Identities=25%  Similarity=0.291  Sum_probs=147.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEe-cChhhHHhhhc------CCceeEEEeccCChH-----------------HHHHH
Q 042185            1 CSQGGIGHALARAFAASDCRVVATG-RSKATMADLEQ------DPRFFVQELDVLSEQ-----------------SVQNV   56 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~-r~~~~~~~~~~------~~~~~~~~~D~~~~~-----------------~i~~~   56 (162)
                      ||++|||+++|+.|+++|++|++++ |+.+.++++.+      ..++.++.+|++|.+                 +++++
T Consensus        53 Gas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~~v~~~  132 (328)
T 2qhx_A           53 GAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAEL  132 (328)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCBCHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccccccHHHHHHH
Confidence            8999999999999999999999999 99876665432      356889999999999                 99999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCC--------------hHHHHHHHHhhhhhHHHHHHHHHHhHhhcC------
Q 042185           57 LSNVLEKFGKIDVLVNNAGVQCVGPLAEVP--------------LSAMEQTFNTNVFGPMRLVQAVVPHMAYRK------  116 (162)
Q Consensus        57 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------  116 (162)
                      ++++.++++++|++|||||+....++.+.+              .++|+..+++|+.+++.+++.++|.|++++      
T Consensus       133 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~  212 (328)
T 2qhx_A          133 VAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGT  212 (328)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSCGGGSCS
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCC
Confidence            999999999999999999987777788888              999999999999999999999999998766      


Q ss_pred             CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccCCCC
Q 042185          117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       117 ~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~gi~  162 (162)
                      .++||++||..+..+.++...|+++|+++++|++.++.|++++|||
T Consensus       213 ~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIr  258 (328)
T 2qhx_A          213 NYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIR  258 (328)
T ss_dssp             CEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             CcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcE
Confidence            7899999999999999999999999999999999999999999875

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=1.1e-34  Score=212.48  Aligned_cols=162  Identities=26%  Similarity=0.347  Sum_probs=147.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecC----------hhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRS----------KATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFG   65 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~----------~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   65 (162)
                      ||++|||+++|++|+++|++|++++|+          .+..++..+     ..++.++.+|++|.++++++++++.+++|
T Consensus        34 Gas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  113 (322)
T 3qlj_A           34 GAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQTAVETFG  113 (322)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            899999999999999999999999987          444433322     35788999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC------CCeEEEeccccccCCCCCchhhh
Q 042185           66 KIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK------KGKIINVGSVTVAAPGPWAGTYT  139 (162)
Q Consensus        66 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~iv~isS~~~~~~~~~~~~y~  139 (162)
                      ++|++|||||.....++.+.+.++|++.+++|+.+++.+++++.|.|.+.+      .|+||++||..+..+.++...|+
T Consensus       114 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~  193 (322)
T 3qlj_A          114 GLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYS  193 (322)
T ss_dssp             CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCBTTCHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCCCCCccHH
Confidence            999999999998888889999999999999999999999999999987532      37999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhccCCCC
Q 042185          140 ASKAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       140 ~sKaa~~~l~~~l~~e~~~~gi~  162 (162)
                      +||+++++|+++++.|++++|||
T Consensus       194 asKaal~~l~~~la~e~~~~gI~  216 (322)
T 3qlj_A          194 AAKAGIATLTLVGAAEMGRYGVT  216 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             HHHHHHHHHHHHHHHHhcccCcE
Confidence            99999999999999999999885

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=9.9e-34  Score=199.47  Aligned_cols=158  Identities=29%  Similarity=0.370  Sum_probs=145.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||++|||++++++|+++|++|++++|+.+...+..   .+.++.+|+++ ++++.+++++.+.++++|++|||||.....
T Consensus         9 Gas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~   84 (239)
T 2ekp_A            9 GGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSL---GAVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHAAAVNVRK   84 (239)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH---TCEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEECCCCCCCC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhh---CcEEEecCCch-HHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence            89999999999999999999999999977633222   27888999999 999999999999999999999999987777


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC--CCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG--PWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~--~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.  ++...|+++|++++.|++.++.|+++
T Consensus        85 ~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~  164 (239)
T 2ekp_A           85 PALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWAR  164 (239)
T ss_dssp             CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHHHHHHHHHHHHhhh
Confidence            8889999999999999999999999999999988888999999999998887  88899999999999999999999999


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +|||
T Consensus       165 ~gi~  168 (239)
T 2ekp_A          165 LGIR  168 (239)
T ss_dssp             GTEE
T ss_pred             cCcE
Confidence            8875

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=1.3e-33  Score=203.25  Aligned_cols=160  Identities=28%  Similarity=0.353  Sum_probs=143.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++..  ..++.++.+|++++++++++++++.++++++|++|||||+..
T Consensus        12 Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~   91 (281)
T 3zv4_A           12 GGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWD   91 (281)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCC
T ss_pred             CCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCc
Confidence            899999999999999999999999999988776654  357889999999999999999999999999999999999854


Q ss_pred             C-CCC----CCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           79 V-GPL----AEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        79 ~-~~~----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      . .++    .+.+.++|++.+++|+.+++.++++++|.|++++ |+||++||..+..+.++...|++||+++++|+++++
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la  170 (281)
T 3zv4_A           92 YSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMA  170 (281)
T ss_dssp             TTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSSSSSCHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhccCCCCCchhHHHHHHHHHHHHHHH
Confidence            3 222    2445678999999999999999999999997654 899999999999999999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|+++. ||
T Consensus       171 ~e~~~~-Ir  178 (281)
T 3zv4_A          171 FELAPH-VR  178 (281)
T ss_dssp             HHHTTT-SE
T ss_pred             HHhcCC-CE
Confidence            999886 64

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=8.1e-34  Score=204.92  Aligned_cols=162  Identities=25%  Similarity=0.345  Sum_probs=143.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh-hhHHhhhc------CCceeEEEeccCC----hHHHHHHHHHHHHHcCCccE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK-ATMADLEQ------DPRFFVQELDVLS----EQSVQNVLSNVLEKFGKIDV   69 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~-~~~~~~~~------~~~~~~~~~D~~~----~~~i~~~~~~~~~~~~~id~   69 (162)
                      ||++|||+++|++|+++|++|++++|+. +.++++.+      ..++.++.+|++|    .++++++++++.+.++++|+
T Consensus        30 Gas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~~g~iD~  109 (288)
T 2x9g_A           30 GAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDV  109 (288)
T ss_dssp             TCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHHhcCCCCE
Confidence            8999999999999999999999999997 65544322      3568899999999    99999999999999999999


Q ss_pred             EEECCCCCCCCCC-----CC-----CChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC------CCeEEEeccccccCCCC
Q 042185           70 LVNNAGVQCVGPL-----AE-----VPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK------KGKIINVGSVTVAAPGP  133 (162)
Q Consensus        70 vi~~ag~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~iv~isS~~~~~~~~  133 (162)
                      +|||||.....++     .+     .+.++|++.+++|+.+++.+++.++|.|++++      .++||++||..+..+.+
T Consensus       110 lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  189 (288)
T 2x9g_A          110 LVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCM  189 (288)
T ss_dssp             EEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCTTTTSCCT
T ss_pred             EEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEecccccCCCC
Confidence            9999998766666     66     88999999999999999999999999997765      68999999999999999


Q ss_pred             CchhhhHhHHHHHHHHHHHHHHhccCCCC
Q 042185          134 WAGTYTASKAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       134 ~~~~y~~sKaa~~~l~~~l~~e~~~~gi~  162 (162)
                      +...|+++|+++.+|++.++.|++++|||
T Consensus       190 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~  218 (288)
T 2x9g_A          190 AFSLYNMGKHALVGLTQSAALELAPYGIR  218 (288)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhccCeE
Confidence            99999999999999999999999999875

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=1e-33  Score=204.93  Aligned_cols=160  Identities=24%  Similarity=0.347  Sum_probs=144.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh--hHHhhh-----cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA--TMADLE-----QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~--~~~~~~-----~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||++|||+++|++|+++|++|++++|+.+  ..+++.     ...++.++.+|++|+++++++++++.++++++|++|||
T Consensus        56 Gas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~n  135 (294)
T 3r3s_A           56 GGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLDILALV  135 (294)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTCCCEEEEC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            89999999999999999999999998732  233222     13678899999999999999999999999999999999


Q ss_pred             CCCCC-CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHH
Q 042185           74 AGVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTL  152 (162)
Q Consensus        74 ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l  152 (162)
                      ||... ..++.+.+.++|++.+++|+.+++.++++++|.|++  +|+||++||..+..+.++...|+++|+++++|++++
T Consensus       136 Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~l  213 (294)
T 3r3s_A          136 AGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGL  213 (294)
T ss_dssp             CCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECChhhccCCCCchHHHHHHHHHHHHHHHH
Confidence            99864 467889999999999999999999999999999854  589999999999999999999999999999999999


Q ss_pred             HHHhccCCCC
Q 042185          153 RLELGHFGID  162 (162)
Q Consensus       153 ~~e~~~~gi~  162 (162)
                      +.|++++|||
T Consensus       214 a~e~~~~gI~  223 (294)
T 3r3s_A          214 AKQVAEKGIR  223 (294)
T ss_dssp             HHHHGGGTCE
T ss_pred             HHHHhhcCeE
Confidence            9999999986

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=1.4e-33  Score=204.19  Aligned_cols=160  Identities=21%  Similarity=0.247  Sum_probs=144.1

Q ss_pred             CCC--CchHHHHHHHHHHCCCeEEEEecChhhHHhh---hc-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQ--GGIGHALARAFAASDCRVVATGRSKATMADL---EQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~--~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~---~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+  +|||+++|++|+++|++|++++|+.+..+.+   .. ...+.++.+|++|.++++++++++.++++++|++||||
T Consensus        38 Gasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnA  117 (293)
T 3grk_A           38 GVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGKLDFLVHAI  117 (293)
T ss_dssp             CCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECC
T ss_pred             cCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            677  5599999999999999999999996433322   11 24688999999999999999999999999999999999


Q ss_pred             CCCC----CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           75 GVQC----VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        75 g~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      |+..    ..++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.+....|++||+++++|++
T Consensus       118 G~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~  195 (293)
T 3grk_A          118 GFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAEKVMPNYNVMGVAKAALEASVK  195 (293)
T ss_dssp             CCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHH
T ss_pred             ccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhccCCCchHHHHHHHHHHHHHHH
Confidence            9875    467889999999999999999999999999999964  6899999999999999999999999999999999


Q ss_pred             HHHHHhccCCCC
Q 042185          151 TLRLELGHFGID  162 (162)
Q Consensus       151 ~l~~e~~~~gi~  162 (162)
                      +++.|++++|||
T Consensus       196 ~la~e~~~~gI~  207 (293)
T 3grk_A          196 YLAVDLGPQNIR  207 (293)
T ss_dssp             HHHHHHGGGTEE
T ss_pred             HHHHHHhHhCCE
Confidence            999999999885

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=7.2e-34  Score=202.42  Aligned_cols=159  Identities=27%  Similarity=0.311  Sum_probs=142.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEE-ecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVAT-GRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~-~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|+++ +++.+..++..+     ..++.++.+|++|+++++++++++.+++|++|++||||
T Consensus        15 Gas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nA   94 (259)
T 3edm_A           15 GAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVA   94 (259)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECC
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence            899999999999999999999988 555554443321     35788999999999999999999999999999999999


Q ss_pred             CCC-CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccccc-CCCCCchhhhHhHHHHHHHHHHH
Q 042185           75 GVQ-CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVA-APGPWAGTYTASKAALHSLTDTL  152 (162)
Q Consensus        75 g~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-~~~~~~~~y~~sKaa~~~l~~~l  152 (162)
                      |.. ...++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+. .+.++...|+++|+++++|++++
T Consensus        95 g~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~l  172 (259)
T 3edm_A           95 GGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGL  172 (259)
T ss_dssp             CCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHCCSTTCHHHHHHHHHHHHHHHHH
T ss_pred             CccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhccCCCCCcHHHHHHHHHHHHHHHHH
Confidence            976 6678889999999999999999999999999999965  5899999999988 78889999999999999999999


Q ss_pred             HHHhccCCCC
Q 042185          153 RLELGHFGID  162 (162)
Q Consensus       153 ~~e~~~~gi~  162 (162)
                      +.|+++. ||
T Consensus       173 a~e~~~~-I~  181 (259)
T 3edm_A          173 AKEVGPK-IR  181 (259)
T ss_dssp             HHHHTTT-CE
T ss_pred             HHHHCCC-CE
Confidence            9999876 64

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=1e-33  Score=201.92  Aligned_cols=162  Identities=28%  Similarity=0.422  Sum_probs=143.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhh-HHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKAT-MADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~-~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|++++|+.+. .+.+.+     ..++.++.+|++|+++++++++++.++++++|++||||
T Consensus        14 Gas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~A   93 (264)
T 3i4f_A           14 AGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNA   93 (264)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCC
T ss_pred             CCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence            899999999999999999999999776543 222221     25789999999999999999999999999999999999


Q ss_pred             C--CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccc-cc-cCCCCCchhhhHhHHHHHHHHH
Q 042185           75 G--VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSV-TV-AAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        75 g--~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~-~~-~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      |  .....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||. .. ..+.++...|+++|+++++|++
T Consensus        94 g~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~asKaa~~~~~~  173 (264)
T 3i4f_A           94 GPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTK  173 (264)
T ss_dssp             CCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHHHHHHHHHHHHHH
T ss_pred             cccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchhHHHHHHHHHHHH
Confidence            9  445577888999999999999999999999999999998888999999987 44 5677788999999999999999


Q ss_pred             HHHHHhccCCCC
Q 042185          151 TLRLELGHFGID  162 (162)
Q Consensus       151 ~l~~e~~~~gi~  162 (162)
                      +++.|++++|||
T Consensus       174 ~la~e~~~~gi~  185 (264)
T 3i4f_A          174 TVAYEEAEYGIT  185 (264)
T ss_dssp             HHHHHHGGGTEE
T ss_pred             HHHHHhhhcCcE
Confidence            999999998875

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-33  Score=198.51  Aligned_cols=162  Identities=28%  Similarity=0.393  Sum_probs=150.1

Q ss_pred             CCCCchHHHHHHHHHHCCC-------eEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCcc
Q 042185            1 CSQGGIGHALARAFAASDC-------RVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKID   68 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-------~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id   68 (162)
                      ||+||||++++++|+++|+       +|++++|+.+.++++..     ..++.++.+|++|+++++.+++++.++++++|
T Consensus         9 GasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   88 (244)
T 2bd0_A            9 GAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERYGHID   88 (244)
T ss_dssp             TTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHHTSCCS
T ss_pred             CCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHHHhCCCCC
Confidence            8999999999999999999       99999999877665432     35688999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHH
Q 042185           69 VLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSL  148 (162)
Q Consensus        69 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l  148 (162)
                      ++|||||.....++.+.+.++|+..+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|+++++|
T Consensus        89 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  168 (244)
T 2bd0_A           89 CLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGL  168 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchhHHHHHHHHHH
Confidence            99999998877788889999999999999999999999999999887889999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCCC
Q 042185          149 TDTLRLELGHFGID  162 (162)
Q Consensus       149 ~~~l~~e~~~~gi~  162 (162)
                      ++.++.|++++|||
T Consensus       169 ~~~la~e~~~~gi~  182 (244)
T 2bd0_A          169 VETMRLYARKCNVR  182 (244)
T ss_dssp             HHHHHHHHTTTTEE
T ss_pred             HHHHHHHhhccCcE
Confidence            99999999998875

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=1.3e-33  Score=204.22  Aligned_cols=160  Identities=24%  Similarity=0.359  Sum_probs=144.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHH-hhh-----cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMA-DLE-----QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~-~~~-----~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|++++|+.+... ...     ...++.++.+|++|+++++++++++.++++++|++||||
T Consensus        54 Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnA  133 (291)
T 3ijr_A           54 GGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNV  133 (291)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCCEEEECC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            89999999999999999999999999865322 221     135788999999999999999999999999999999999


Q ss_pred             CCCC-CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           75 GVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        75 g~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      |... ..++.+.+.++|++.+++|+.+++.++++++|.|++  .++||++||..+..+.+....|+++|+++++|+++++
T Consensus       134 g~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la  211 (291)
T 3ijr_A          134 AQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLS  211 (291)
T ss_dssp             CCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--TCEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCEEEEEechHhcCCCCCChhHHHHHHHHHHHHHHHH
Confidence            9864 467888999999999999999999999999999843  5799999999999999999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       212 ~e~~~~gi~  220 (291)
T 3ijr_A          212 QSLVQKGIR  220 (291)
T ss_dssp             HHHGGGTCE
T ss_pred             HHHhhcCEE
Confidence            999999985

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=1.5e-33  Score=197.98  Aligned_cols=159  Identities=28%  Similarity=0.428  Sum_probs=143.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++..      ..++.++.+|++|+++++++++++.++++++|++||||
T Consensus         9 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~A   88 (235)
T 3l77_A            9 GASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANA   88 (235)
T ss_dssp             SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCSEEEECC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            899999999999999999999999999887665432      46789999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.++|++.+++|+.+++.++++++|.| +++++++|+++|..+..+.+....|+++|+++++|++++  
T Consensus        89 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~l--  165 (235)
T 3l77_A           89 GLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSL-KRTGGLALVTTSDVSARLIPYGGGYVSTKWAARALVRTF--  165 (235)
T ss_dssp             CCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHH-HHHTCEEEEECCGGGSSCCTTCHHHHHHHHHHHHHHHHH--
T ss_pred             ccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH-hhcCCcEEEEecchhcccCCCcchHHHHHHHHHHHHHHH--
Confidence            99888889999999999999999999999999999999 445689999999999999999999999999999999999  


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      ++...|||
T Consensus       166 ~~~~~~i~  173 (235)
T 3l77_A          166 QIENPDVR  173 (235)
T ss_dssp             HHHCTTSE
T ss_pred             hhcCCCeE
Confidence            44466664

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.7e-33  Score=199.10  Aligned_cols=162  Identities=32%  Similarity=0.457  Sum_probs=148.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+||||++++++|+++|++|++++|+.+.++++.+      ..++.++.+|++|+++++.+++++.++++++|++||||
T Consensus         9 GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~A   88 (250)
T 2cfc_A            9 GASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNA   88 (250)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence            899999999999999999999999999877665432      24688999999999999999999999999999999999


Q ss_pred             CCCCCCC---CCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHH
Q 042185           75 GVQCVGP---LAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDT  151 (162)
Q Consensus        75 g~~~~~~---~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~  151 (162)
                      |.....+   +.+.+.++|+..+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|++++.|++.
T Consensus        89 g~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~  168 (250)
T 2cfc_A           89 GITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKS  168 (250)
T ss_dssp             CCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHHHHHHHHHHH
Confidence            9866555   7788999999999999999999999999999887789999999999999999999999999999999999


Q ss_pred             HHHHhccCCCC
Q 042185          152 LRLELGHFGID  162 (162)
Q Consensus       152 l~~e~~~~gi~  162 (162)
                      ++.|++++||+
T Consensus       169 l~~e~~~~gi~  179 (250)
T 2cfc_A          169 VAVDYAGSGIR  179 (250)
T ss_dssp             HHHHHGGGTEE
T ss_pred             HHHHhcccCeE
Confidence            99999988874

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=1.2e-34  Score=206.23  Aligned_cols=160  Identities=21%  Similarity=0.264  Sum_probs=141.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||++|||+++|++|+++|++|++++|+.+...+.. ...+.++.+|++|+++++.+++.+.+ ++++|++|||||.....
T Consensus        16 Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~-~g~id~lv~nAg~~~~~   93 (257)
T 3tl3_A           16 GGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL-GDRARFAAADVTDEAAVASALDLAET-MGTLRIVVNCAGTGNAI   93 (257)
T ss_dssp             TTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHT-CTTEEEEECCTTCHHHHHHHHHHHHH-HSCEEEEEECGGGSHHH
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhc-CCceEEEECCCCCHHHHHHHHHHHHH-hCCCCEEEECCCCCCCc
Confidence            89999999999999999999999999765543332 45788999999999999999998877 99999999999975432


Q ss_pred             ----CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhh--------cCCCeEEEeccccccCCCCCchhhhHhHHHHHHH
Q 042185           81 ----PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY--------RKKGKIINVGSVTVAAPGPWAGTYTASKAALHSL  148 (162)
Q Consensus        81 ----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--------~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l  148 (162)
                          +..+.+.++|++.+++|+.+++.++++++|.|++        ++.|+||++||..+..+.++...|++||+++++|
T Consensus        94 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  173 (257)
T 3tl3_A           94 RVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGM  173 (257)
T ss_dssp             HHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCCCccHHHHHHHHHHH
Confidence                2335889999999999999999999999999987        5678999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCCC
Q 042185          149 TDTLRLELGHFGID  162 (162)
Q Consensus       149 ~~~l~~e~~~~gi~  162 (162)
                      +++++.|++++|||
T Consensus       174 ~~~la~e~~~~gI~  187 (257)
T 3tl3_A          174 TLPIARDLASHRIR  187 (257)
T ss_dssp             HHHHHHHHGGGTEE
T ss_pred             HHHHHHHhcccCcE
Confidence            99999999999885

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=1.3e-33  Score=197.81  Aligned_cols=158  Identities=21%  Similarity=0.296  Sum_probs=145.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC--CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++..+  .++.++.+|+++.++++++++++.+   .+|++|||||...
T Consensus         8 Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~---~~d~lv~~Ag~~~   84 (230)
T 3guy_A            8 GASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDS---IPSTVVHSAGSGY   84 (230)
T ss_dssp             STTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSS---CCSEEEECCCCCC
T ss_pred             cCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhh---cCCEEEEeCCcCC
Confidence            8999999999999999999999999999888877654  5788999999999999999888754   3499999999988


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ..++.+.+.++|++.+++|+.+++.+++.++|.|++++ ++||++||..+..+.+....|+++|+++++|++.++.|+++
T Consensus        85 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~  163 (230)
T 3guy_A           85 FGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKG  163 (230)
T ss_dssp             CSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecccCCCCCCCchhHHHHHHHHHHHHHHHHHHHh
Confidence            88899999999999999999999999999999997655 49999999999999999999999999999999999999999


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +|||
T Consensus       164 ~gi~  167 (230)
T 3guy_A          164 KPMK  167 (230)
T ss_dssp             SSCE
T ss_pred             cCeE
Confidence            9985

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=3.7e-33  Score=200.74  Aligned_cols=161  Identities=17%  Similarity=0.199  Sum_probs=145.1

Q ss_pred             CCC--CchHHHHHHHHHHCCCeEEEEecCh--hhHHhhhc-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQ--GGIGHALARAFAASDCRVVATGRSK--ATMADLEQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~--~giG~~ia~~l~~~g~~vi~~~r~~--~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+  +|||+++|++|+++|++|++++|+.  +.++++.. ...+.++.+|+++.++++++++++.++++++|++|||||
T Consensus        33 Gasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg  112 (280)
T 3nrc_A           33 GLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGLDAIVHSIA  112 (280)
T ss_dssp             CCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSSCCEEEECCC
T ss_pred             CCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence            777  7899999999999999999999987  55555533 346889999999999999999999999999999999999


Q ss_pred             CCCC----CCCCC-CChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           76 VQCV----GPLAE-VPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        76 ~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      ....    .++.+ .+.++|+..+++|+.+++.++++++|.|+++ .++||++||..+..+.+....|+++|+++++|++
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaal~~~~~  191 (280)
T 3nrc_A          113 FAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEKAMPSYNTMGVAKASLEATVR  191 (280)
T ss_dssp             CCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTSCCTTTHHHHHHHHHHHHHHH
T ss_pred             cCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccccccCCCCchhhHHHHHHHHHHHH
Confidence            8654    44445 8999999999999999999999999999755 6899999999999999999999999999999999


Q ss_pred             HHHHHhccCCCC
Q 042185          151 TLRLELGHFGID  162 (162)
Q Consensus       151 ~l~~e~~~~gi~  162 (162)
                      +++.|++++|||
T Consensus       192 ~la~e~~~~gi~  203 (280)
T 3nrc_A          192 YTALALGEDGIK  203 (280)
T ss_dssp             HHHHHHGGGTCE
T ss_pred             HHHHHHHHcCcE
Confidence            999999999985

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=5.2e-33  Score=196.77  Aligned_cols=162  Identities=22%  Similarity=0.321  Sum_probs=148.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+||||++++++|+++|++|++++|+.+..++...    ..++.++.+|++|+++++.+++++.+.++++|++|||||.
T Consensus        13 GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~   92 (251)
T 1zk4_A           13 GGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGI   92 (251)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCC
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence            899999999999999999999999999876655432    2578899999999999999999999999999999999998


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCC-CeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK-GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      ....++.+.+.++|++.+++|+.+++.+++.++|.|++++. ++||++||..+..+.++...|+++|++++.|+++++.|
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e  172 (251)
T 1zk4_A           93 AVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALD  172 (251)
T ss_dssp             CCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHHHHHHHHHHHHHHH
Confidence            77778888999999999999999999999999999987665 89999999999999999999999999999999999999


Q ss_pred             hc--cCCCC
Q 042185          156 LG--HFGID  162 (162)
Q Consensus       156 ~~--~~gi~  162 (162)
                      ++  +.|||
T Consensus       173 ~~~~~~~i~  181 (251)
T 1zk4_A          173 CALKDYDVR  181 (251)
T ss_dssp             HHHTTCSEE
T ss_pred             hcccCCCeE
Confidence            88  77764

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=1.2e-32  Score=196.06  Aligned_cols=162  Identities=30%  Similarity=0.424  Sum_probs=148.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEec-ChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGR-SKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r-~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+||||++++++|+++|++|++++| +.+..+++.+     ...+.++.+|++|+++++++++++.+.++++|++||||
T Consensus        14 GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~A   93 (261)
T 1gee_A           14 GSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNA   93 (261)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            89999999999999999999999999 7665554322     35678999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      |.....++.+.+.++|+..+++|+.+++.+++.++|.|++++ .++||++||..+..+.++...|+++|++++.|++.++
T Consensus        94 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la  173 (261)
T 1gee_A           94 GLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLA  173 (261)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHHHHHHHHHHHHHHH
Confidence            987777788899999999999999999999999999998766 7899999999999999999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|+++.||+
T Consensus       174 ~e~~~~gi~  182 (261)
T 1gee_A          174 LEYAPKGIR  182 (261)
T ss_dssp             HHHGGGTCE
T ss_pred             HHhcccCeE
Confidence            999998875

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=3.7e-33  Score=199.45  Aligned_cols=162  Identities=23%  Similarity=0.287  Sum_probs=146.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEE-EecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVA-TGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~-~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|++ ..|+.+..++..+     ..++.++.+|++|+++++++++++.++++++|++||||
T Consensus        33 Gas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~nA  112 (267)
T 4iiu_A           33 GASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYGVVSNA  112 (267)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECC
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECC
Confidence            89999999999999999999866 5566655544322     36789999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHh-hcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMA-YRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      |.....++.+.+.++|+..+++|+.+++.+++.+++.|. +++.++||++||..+..+.++...|+++|+++++|++.++
T Consensus       113 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la  192 (267)
T 4iiu_A          113 GIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALA  192 (267)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhHHHHHHHHHHHHHHH
Confidence            998888888999999999999999999999999998886 5667999999999999999999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       193 ~e~~~~gi~  201 (267)
T 4iiu_A          193 IELAKRKIT  201 (267)
T ss_dssp             HHHGGGTEE
T ss_pred             HHHhhcCeE
Confidence            999998875

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=9.3e-33  Score=198.92  Aligned_cols=160  Identities=19%  Similarity=0.385  Sum_probs=143.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhh-HHhh----hc-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKAT-MADL----EQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~-~~~~----~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||++++++|+++|++|++++|+.+. .+++    .. ..++.++.+|++|.++++.+++++.+.++++|++||||
T Consensus        36 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~A  115 (283)
T 1g0o_A           36 GAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNS  115 (283)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            899999999999999999999999998653 2222    22 35788999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCC-chhhhHhHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPW-AGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-~~~y~~sKaa~~~l~~~l~  153 (162)
                      |.....++.+.+.++|++.+++|+.+++.+++++.|.|  ++.++||++||..+..+.+. ...|+++|+++++|+++++
T Consensus       116 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la  193 (283)
T 1g0o_A          116 GVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMA  193 (283)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS--CTTCEEEEECCGGGTCSSCSSCHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH--hcCCeEEEEechhhccCCCCCCcchHHHHHHHHHHHHHHH
Confidence            98777788889999999999999999999999999998  35689999999999887664 8899999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       194 ~e~~~~gi~  202 (283)
T 1g0o_A          194 IDMADKKIT  202 (283)
T ss_dssp             HHHGGGTCE
T ss_pred             HHhcccCeE
Confidence            999999985

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=6.6e-33  Score=199.87  Aligned_cols=161  Identities=17%  Similarity=0.276  Sum_probs=143.8

Q ss_pred             CCC--CchHHHHHHHHHHCCCeEEEEecChh---hHHhhhc-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQ--GGIGHALARAFAASDCRVVATGRSKA---TMADLEQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~--~giG~~ia~~l~~~g~~vi~~~r~~~---~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+  +|||+++|++|+++|++|++++|+.+   .++++.. ...+.++.+|++|+++++.+++++.++++++|++||||
T Consensus        28 Gas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~A  107 (285)
T 2p91_A           28 GVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGSLDIIVHSI  107 (285)
T ss_dssp             CCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCCCEEEECC
T ss_pred             CCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            777  99999999999999999999999875   3333322 13478899999999999999999999999999999999


Q ss_pred             CCCCC----CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           75 GVQCV----GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        75 g~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      |....    .++.+.+.++|+..+++|+.+++.++++++|.|+++ +++||++||..+..+.+....|+++|+++++|++
T Consensus       108 g~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  186 (285)
T 2p91_A          108 AYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEKVVPHYNVMGIAKAALESTVR  186 (285)
T ss_dssp             CCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHH
T ss_pred             CCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhccCCCCccHHHHHHHHHHHHHH
Confidence            98653    567789999999999999999999999999999654 5899999999999999999999999999999999


Q ss_pred             HHHHHhccCCCC
Q 042185          151 TLRLELGHFGID  162 (162)
Q Consensus       151 ~l~~e~~~~gi~  162 (162)
                      +++.|++++|||
T Consensus       187 ~la~e~~~~gi~  198 (285)
T 2p91_A          187 YLAYDIAKHGHR  198 (285)
T ss_dssp             HHHHHHHTTTCE
T ss_pred             HHHHHhcccCcE
Confidence            999999999985

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=3.8e-33  Score=199.91  Aligned_cols=162  Identities=27%  Similarity=0.328  Sum_probs=144.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEE-ecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVAT-GRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~-~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|+++ .|+.+..+++.+     ..++.++.+|++|.++++.+++++.++++++|++||||
T Consensus        33 Gas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nA  112 (272)
T 4e3z_A           33 GGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNA  112 (272)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECC
Confidence            899999999999999999999776 777666554432     36788999999999999999999999999999999999


Q ss_pred             CCCCC-CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc---CCCeEEEeccccccCCCC-CchhhhHhHHHHHHHH
Q 042185           75 GVQCV-GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR---KKGKIINVGSVTVAAPGP-WAGTYTASKAALHSLT  149 (162)
Q Consensus        75 g~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~iv~isS~~~~~~~~-~~~~y~~sKaa~~~l~  149 (162)
                      |.... .++.+.+.++|++.+++|+.+++.+++.++|.|++.   +.++||++||..+..+.+ ....|+++|++++.|+
T Consensus       113 g~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~  192 (272)
T 4e3z_A          113 GIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFT  192 (272)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHHHHHHHHHHH
Confidence            98754 778889999999999999999999999999999763   468999999999887766 6788999999999999


Q ss_pred             HHHHHHhccCCCC
Q 042185          150 DTLRLELGHFGID  162 (162)
Q Consensus       150 ~~l~~e~~~~gi~  162 (162)
                      ++++.|++++|||
T Consensus       193 ~~la~e~~~~gi~  205 (272)
T 4e3z_A          193 IGLAREVAAEGIR  205 (272)
T ss_dssp             HHHHHHHGGGTEE
T ss_pred             HHHHHHHHHcCcE
Confidence            9999999998875

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=5.3e-33  Score=198.71  Aligned_cols=160  Identities=16%  Similarity=0.208  Sum_probs=143.1

Q ss_pred             CCC--CchHHHHHHHHHHCCCeEEEEecChhhHH---hhh-cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQ--GGIGHALARAFAASDCRVVATGRSKATMA---DLE-QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~--~giG~~ia~~l~~~g~~vi~~~r~~~~~~---~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+  +|||+++|++|+++|++|++++|+.+..+   ++. ....+.++.+|++|+++++++++++.++++++|++||||
T Consensus        21 Ga~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nA  100 (271)
T 3ek2_A           21 GLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWDSLDGLVHSI  100 (271)
T ss_dssp             CCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred             CCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            777  99999999999999999999999854332   222 234588999999999999999999999999999999999


Q ss_pred             CCCCC----CCCCC-CChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHH
Q 042185           75 GVQCV----GPLAE-VPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLT  149 (162)
Q Consensus        75 g~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~  149 (162)
                      |+...    .++.+ .+.++|+..+++|+.+++.+++.++|.|++  .++||++||..+..+.++...|+++|+++++|+
T Consensus       101 g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~  178 (271)
T 3ek2_A          101 GFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERAIPNYNTMGLAKAALEASV  178 (271)
T ss_dssp             CCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHH
T ss_pred             ccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEeccccccCCCCccchhHHHHHHHHHH
Confidence            98754    55565 899999999999999999999999999863  579999999999999999999999999999999


Q ss_pred             HHHHHHhccCCCC
Q 042185          150 DTLRLELGHFGID  162 (162)
Q Consensus       150 ~~l~~e~~~~gi~  162 (162)
                      ++++.|++++|||
T Consensus       179 ~~la~e~~~~gi~  191 (271)
T 3ek2_A          179 RYLAVSLGAKGVR  191 (271)
T ss_dssp             HHHHHHHHTTTCE
T ss_pred             HHHHHHHHhcCcE
Confidence            9999999999985

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=6.9e-33  Score=197.38  Aligned_cols=161  Identities=25%  Similarity=0.246  Sum_probs=143.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHH-cCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEK-FGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~-~~~id~vi~~a   74 (162)
                      ||++|||++++++|+++|++|++++|+.+.++++.+     ..++.++.+|++|+++++.+++++.++ ++++|++||||
T Consensus        12 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id~lvnnA   91 (260)
T 2qq5_A           12 GASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNA   91 (260)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTCCCEEEECC
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEECC
Confidence            899999999999999999999999999877665433     346889999999999999999999886 89999999999


Q ss_pred             CC--C-----CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHH
Q 042185           75 GV--Q-----CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHS  147 (162)
Q Consensus        75 g~--~-----~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~  147 (162)
                      |.  .     ...++.+.+.++|+..+++|+.+++.+++.+.|.|++++.|+||++||..+..+. +...|+++|+++++
T Consensus        92 g~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~~Y~asK~a~~~  170 (260)
T 2qq5_A           92 YAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FNVPYGVGKAACDK  170 (260)
T ss_dssp             CTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SSHHHHHHHHHHHH
T ss_pred             ccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CCCchHHHHHHHHH
Confidence            53  2     2457778899999999999999999999999999988778999999999887754 46889999999999


Q ss_pred             HHHHHHHHhccCCCC
Q 042185          148 LTDTLRLELGHFGID  162 (162)
Q Consensus       148 l~~~l~~e~~~~gi~  162 (162)
                      |+++++.|++++|||
T Consensus       171 ~~~~la~e~~~~gi~  185 (260)
T 2qq5_A          171 LAADCAHELRRHGVS  185 (260)
T ss_dssp             HHHHHHHHHGGGTCE
T ss_pred             HHHHHHHHhccCCeE
Confidence            999999999999985

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=7.3e-33  Score=197.74  Aligned_cols=160  Identities=17%  Similarity=0.214  Sum_probs=143.9

Q ss_pred             CCC--CchHHHHHHHHHHCCCeEEEEecChhhHHhh---hc---CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            1 CSQ--GGIGHALARAFAASDCRVVATGRSKATMADL---EQ---DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         1 Ga~--~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~---~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      ||+  +|||+++|++|+++|++|++++|+.+..+.+   ..   ..++.++.+|++|.++++++++++.++++++|++||
T Consensus        14 Gasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~   93 (266)
T 3oig_A           14 GVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVGVIHGIAH   93 (266)
T ss_dssp             CCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             cCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhCCeeEEEE
Confidence            778  6799999999999999999999986433322   22   136899999999999999999999999999999999


Q ss_pred             CCCCCC----CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHH
Q 042185           73 NAGVQC----VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSL  148 (162)
Q Consensus        73 ~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l  148 (162)
                      |||...    ..++.+.+.++|+..+++|+.+++.+++.++|.|++  +|+||++||..+..+.+....|++||+++++|
T Consensus        94 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  171 (266)
T 3oig_A           94 CIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE--GGSIVTLTYLGGELVMPNYNVMGVAKASLDAS  171 (266)
T ss_dssp             CCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTHHHHHHHHHHHHH
T ss_pred             ccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CceEEEEecccccccCCCcchhHHHHHHHHHH
Confidence            999875    467788999999999999999999999999999853  58999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCCC
Q 042185          149 TDTLRLELGHFGID  162 (162)
Q Consensus       149 ~~~l~~e~~~~gi~  162 (162)
                      +++++.|++++|||
T Consensus       172 ~~~la~e~~~~gi~  185 (266)
T 3oig_A          172 VKYLAADLGKENIR  185 (266)
T ss_dssp             HHHHHHHHGGGTEE
T ss_pred             HHHHHHHHhhcCcE
Confidence            99999999999875

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=4.5e-33  Score=198.40  Aligned_cols=162  Identities=25%  Similarity=0.303  Sum_probs=148.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC------------CceeEEEeccCChHHHHHHHHHHHHHcCCc-
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------------PRFFVQELDVLSEQSVQNVLSNVLEKFGKI-   67 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~------------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i-   67 (162)
                      ||+||||++++++|+++|++|++++|+.+..+++.++            .++.++.+|++|.++++.+++++.+.++++ 
T Consensus        14 GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i~   93 (264)
T 2pd6_A           14 GAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQACFSRPP   93 (264)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHHHHHHSSCC
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            8999999999999999999999999998776655332            457889999999999999999999999999 


Q ss_pred             cEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHH
Q 042185           68 DVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALH  146 (162)
Q Consensus        68 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~  146 (162)
                      |++|||||.....++.+.+.++|+..+++|+.+++.+++++.|.|.+++ .++||++||..+..+.++...|+++|++++
T Consensus        94 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  173 (264)
T 2pd6_A           94 SVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVI  173 (264)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTTBHHHHHHHHHHH
T ss_pred             eEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCCChhhHHHHHHHH
Confidence            9999999987777888899999999999999999999999999998766 689999999999989999999999999999


Q ss_pred             HHHHHHHHHhccCCCC
Q 042185          147 SLTDTLRLELGHFGID  162 (162)
Q Consensus       147 ~l~~~l~~e~~~~gi~  162 (162)
                      .|++.++.|++++||+
T Consensus       174 ~~~~~la~e~~~~gi~  189 (264)
T 2pd6_A          174 GLTQTAARELGRHGIR  189 (264)
T ss_dssp             HHHHHHHHHHGGGTEE
T ss_pred             HHHHHHHHHhhhcCeE
Confidence            9999999999988874

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=8.9e-33  Score=197.36  Aligned_cols=161  Identities=22%  Similarity=0.295  Sum_probs=144.8

Q ss_pred             CCC--CchHHHHHHHHHHCCCeEEEEecChhhH-----Hhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEE
Q 042185            1 CSQ--GGIGHALARAFAASDCRVVATGRSKATM-----ADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLV   71 (162)
Q Consensus         1 Ga~--~giG~~ia~~l~~~g~~vi~~~r~~~~~-----~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi   71 (162)
                      ||+  +|||+++|++|+++|++|++++|+.+..     +++..  ..++.++.+|++|+++++++++++.++++++|++|
T Consensus        27 Gas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li  106 (267)
T 3gdg_A           27 GASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFI  106 (267)
T ss_dssp             TCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHTSCCSEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            777  8999999999999999999999875432     22221  46788999999999999999999999999999999


Q ss_pred             ECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC--CCchhhhHhHHHHHHHH
Q 042185           72 NNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG--PWAGTYTASKAALHSLT  149 (162)
Q Consensus        72 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~--~~~~~y~~sKaa~~~l~  149 (162)
                      ||||+....++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.  ++...|+++|+++++|+
T Consensus       107 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~  186 (267)
T 3gdg_A          107 ANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMA  186 (267)
T ss_dssp             ECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCHHHHHHHHHHHHHH
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCCcchHHHHHHHHHH
Confidence            9999988888899999999999999999999999999999998888999999999888765  57889999999999999


Q ss_pred             HHHHHHhccCCCC
Q 042185          150 DTLRLELGHFGID  162 (162)
Q Consensus       150 ~~l~~e~~~~gi~  162 (162)
                      +.++.|+++. ||
T Consensus       187 ~~la~e~~~~-i~  198 (267)
T 3gdg_A          187 RSLANEWRDF-AR  198 (267)
T ss_dssp             HHHHHHTTTT-CE
T ss_pred             HHHHHHhccC-cE
Confidence            9999999876 53

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=7.6e-34  Score=200.63  Aligned_cols=158  Identities=20%  Similarity=0.221  Sum_probs=143.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEE-e--cChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVAT-G--RSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~-~--r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      ||++|||++++++|+++|++|+++ +  |+.+.++++.++.    ..+|+.|.++++.+++++.++++++|++|||||..
T Consensus         8 Gas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~   83 (244)
T 1zmo_A            8 HARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN----PGTIALAEQKPERLVDATLQHGEAIDTIVSNDYIP   83 (244)
T ss_dssp             STTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS----TTEEECCCCCGGGHHHHHGGGSSCEEEEEECCCCC
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh----CCCcccCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence            899999999999999999999999 6  9988777664432    12345588889999999999999999999999987


Q ss_pred             CC---CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           78 CV---GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        78 ~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      ..   .++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.+....|+++|+++++|+++++.
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~  163 (244)
T 1zmo_A           84 RPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAK  163 (244)
T ss_dssp             TTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence            77   788899999999999999999999999999999888789999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       164 e~~~~gi~  171 (244)
T 1zmo_A          164 TLSRDGIL  171 (244)
T ss_dssp             HHGGGTEE
T ss_pred             HHhhcCcE
Confidence            99999875

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=5.3e-33  Score=196.33  Aligned_cols=162  Identities=27%  Similarity=0.370  Sum_probs=148.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+||||++++++|+++|++|++++|+.+..+++.+      ...+.++.+|++|+++++++++++.+.++++|++||||
T Consensus        14 GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~A   93 (248)
T 2pnf_A           14 GSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNA   93 (248)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCCSEEEECC
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            899999999999999999999999999876655432      45788999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.++|+..+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|++++.|++.++.
T Consensus        94 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~  173 (248)
T 2pnf_A           94 GITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAK  173 (248)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHHHHHHHHHHHHHHH
Confidence            98777778889999999999999999999999999999887789999999998888888899999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |+++.||+
T Consensus       174 e~~~~~i~  181 (248)
T 2pnf_A          174 ELAPRNVL  181 (248)
T ss_dssp             HHGGGTEE
T ss_pred             HhcccCeE
Confidence            99988874

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=1.5e-32  Score=195.24  Aligned_cols=162  Identities=27%  Similarity=0.314  Sum_probs=147.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+||||++++++|+++|++|++++|+.+..++..+     ..++.++.+|++|.++++.+++++.++++++|++|||||
T Consensus        20 GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag   99 (260)
T 3awd_A           20 GGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAG   99 (260)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            899999999999999999999999999876554322     356889999999999999999999999999999999999


Q ss_pred             CCC-CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCc--hhhhHhHHHHHHHHHHH
Q 042185           76 VQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWA--GTYTASKAALHSLTDTL  152 (162)
Q Consensus        76 ~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~--~~y~~sKaa~~~l~~~l  152 (162)
                      ... ..++.+.+.++|+..+++|+.+++.+++++.|.|++++.++||++||..+..+.+..  ..|+++|++++.|++.+
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l  179 (260)
T 3awd_A          100 ICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSL  179 (260)
T ss_dssp             CCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccccHHHHHHHHHHHHHH
Confidence            876 667888999999999999999999999999999988778999999999988877776  89999999999999999


Q ss_pred             HHHhccCCCC
Q 042185          153 RLELGHFGID  162 (162)
Q Consensus       153 ~~e~~~~gi~  162 (162)
                      +.|++++|||
T Consensus       180 ~~e~~~~gi~  189 (260)
T 3awd_A          180 AAEWAPHGIR  189 (260)
T ss_dssp             HHHHGGGTEE
T ss_pred             HHHhhhcCeE
Confidence            9999988874

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=6.4e-33  Score=195.53  Aligned_cols=162  Identities=27%  Similarity=0.373  Sum_probs=148.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEE-EecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVA-TGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~-~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+||||++++++|+++|++|++ .+|+.+..+++.+     ..++.++.+|++++++++++++++.++++++|++||||
T Consensus         8 GasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~A   87 (244)
T 1edo_A            8 GASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNA   87 (244)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECC
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            89999999999999999999988 5888766554432     35688899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.++|+..+++|+.+++.+++.+.|.|++++.++||++||..+..+.++...|+++|++++.|++.++.
T Consensus        88 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~  167 (244)
T 1edo_A           88 GITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAR  167 (244)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHHHHHHHHHHH
Confidence            98877778889999999999999999999999999999887889999999999988889999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |+++.||+
T Consensus       168 e~~~~gi~  175 (244)
T 1edo_A          168 EGASRNIN  175 (244)
T ss_dssp             HHHTTTEE
T ss_pred             HhhhcCCE
Confidence            99988874

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=8.5e-34  Score=222.18  Aligned_cols=161  Identities=19%  Similarity=0.288  Sum_probs=142.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh---------hhHHhhhcC---CceeEEEeccCChHHHHHHHHHHHHHcCCcc
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK---------ATMADLEQD---PRFFVQELDVLSEQSVQNVLSNVLEKFGKID   68 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~---------~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id   68 (162)
                      ||++|||+++|+.|+++|++|++.+|+.         +.++++.++   .... ..+|++|.++++++++++.+++|++|
T Consensus        15 Gas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~-~~~d~~d~~~~~~~v~~~~~~~G~iD   93 (604)
T 2et6_A           15 GAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV-AVADYNNVLDGDKIVETAVKNFGTVH   93 (604)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCE-EEEECCCTTCHHHHHHHHHHHHSCCC
T ss_pred             CCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe-EEEEcCCHHHHHHHHHHHHHHcCCCC
Confidence            8999999999999999999999998764         333333221   1112 23699999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHH
Q 042185           69 VLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSL  148 (162)
Q Consensus        69 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l  148 (162)
                      ++|||||+....++.+++.++|++++++|+.+++.++|+++|+|++++.|+||++||.++..+.++...|++||+|+.+|
T Consensus        94 iLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKaal~~l  173 (604)
T 2et6_A           94 VIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGF  173 (604)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCchHHHHHHHHHHHH
Confidence            99999999877889999999999999999999999999999999988889999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCCC
Q 042185          149 TDTLRLELGHFGID  162 (162)
Q Consensus       149 ~~~l~~e~~~~gi~  162 (162)
                      +++|+.|++++|||
T Consensus       174 t~~la~El~~~gIr  187 (604)
T 2et6_A          174 AETLAKEGAKYNIK  187 (604)
T ss_dssp             HHHHHHHHGGGTEE
T ss_pred             HHHHHHHhCccCeE
Confidence            99999999999986

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=8.5e-33  Score=197.29  Aligned_cols=162  Identities=23%  Similarity=0.309  Sum_probs=135.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHc-CCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKF-GKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~id~vi~~a   74 (162)
                      ||+||||++++++|+++|++|++++|+.+.+++...     ...+.++.+|+++.++++++++++.+.+ +++|++||||
T Consensus        21 GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~A  100 (266)
T 1xq1_A           21 GGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNL  100 (266)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCcEEEECC
Confidence            899999999999999999999999999876655432     3468899999999999999999999999 8999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.+....|+++|++++.|++.++.
T Consensus       101 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~  180 (266)
T 1xq1_A          101 GAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLAC  180 (266)
T ss_dssp             CC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHHHHHHHHHHHHHHHH
Confidence            98777788889999999999999999999999999999888789999999999998888899999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       181 e~~~~gi~  188 (266)
T 1xq1_A          181 EWASDGIR  188 (266)
T ss_dssp             HHGGGTCE
T ss_pred             HHhHhCcE
Confidence            99988875

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=3.6e-33  Score=200.32  Aligned_cols=160  Identities=19%  Similarity=0.266  Sum_probs=143.7

Q ss_pred             CCC--CchHHHHHHHHHHCCCeEEEEecChh---hHHhhhc-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQ--GGIGHALARAFAASDCRVVATGRSKA---TMADLEQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~--~giG~~ia~~l~~~g~~vi~~~r~~~---~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+  +|||++++++|+++|++|++++|+.+   .++++.. ...+.++.+|++|+++++.+++++.++++++|++||||
T Consensus        13 Gas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nA   92 (275)
T 2pd4_A           13 GVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSV   92 (275)
T ss_dssp             CCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             CCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            777  99999999999999999999999875   3333332 13478899999999999999999999999999999999


Q ss_pred             CCCCC----CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           75 GVQCV----GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        75 g~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      |....    .++.+.+.++|+..+++|+.+++.++++++|.|++  +|+||++||..+..+.+....|+++|+++++|++
T Consensus        93 g~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~  170 (275)
T 2pd4_A           93 AFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYMAHYNVMGLAKAALESAVR  170 (275)
T ss_dssp             CCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchhcCCCCCchhhHHHHHHHHHHHH
Confidence            98654    57778999999999999999999999999999864  4899999999999999999999999999999999


Q ss_pred             HHHHHhccCCCC
Q 042185          151 TLRLELGHFGID  162 (162)
Q Consensus       151 ~l~~e~~~~gi~  162 (162)
                      .++.|++++|||
T Consensus       171 ~la~e~~~~gi~  182 (275)
T 2pd4_A          171 YLAVDLGKHHIR  182 (275)
T ss_dssp             HHHHHHHTTTCE
T ss_pred             HHHHHhhhcCeE
Confidence            999999999985

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=4.7e-33  Score=198.11  Aligned_cols=158  Identities=23%  Similarity=0.287  Sum_probs=142.0

Q ss_pred             CCCCchHHHHHHHHHH---CCCeEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHH--HcCCcc
Q 042185            1 CSQGGIGHALARAFAA---SDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLE--KFGKID   68 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~---~g~~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~--~~~~id   68 (162)
                      ||++|||++++++|++   +|++|++++|+.+.++++.+       ..++.++.+|++|+++++.+++++.+  .++++|
T Consensus        13 Gas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~g~~d   92 (259)
T 1oaa_A           13 GASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQ   92 (259)
T ss_dssp             SCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCCCTTCC
T ss_pred             CCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhccccccCC
Confidence            8999999999999999   89999999999877665432       34688999999999999999999988  678899


Q ss_pred             --EEEECCCCCCC--CCCCC-CChHHHHHHHHhhhhhHHHHHHHHHHhHhhc--CCCeEEEeccccccCCCCCchhhhHh
Q 042185           69 --VLVNNAGVQCV--GPLAE-VPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR--KKGKIINVGSVTVAAPGPWAGTYTAS  141 (162)
Q Consensus        69 --~vi~~ag~~~~--~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~isS~~~~~~~~~~~~y~~s  141 (162)
                        ++|||||....  .++.+ .+.++|++.+++|+.+++.++++++|.|+++  +.|+||++||..+..+.++...|+++
T Consensus        93 ~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  172 (259)
T 1oaa_A           93 RLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAG  172 (259)
T ss_dssp             EEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             ccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCCCCccHHHHH
Confidence              99999998543  45667 7899999999999999999999999999776  56899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcc
Q 042185          142 KAALHSLTDTLRLELGH  158 (162)
Q Consensus       142 Kaa~~~l~~~l~~e~~~  158 (162)
                      |+++++|+++++.|+++
T Consensus       173 Kaa~~~~~~~la~e~~~  189 (259)
T 1oaa_A          173 KAARDMLYQVLAAEEPS  189 (259)
T ss_dssp             HHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHHHHHhhCCC
Confidence            99999999999999863

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=2.6e-33  Score=198.27  Aligned_cols=158  Identities=24%  Similarity=0.410  Sum_probs=132.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++.+  ...+.+..+|+++.+++++++++.    +++|++|||||...
T Consensus        21 Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~----~~id~li~~Ag~~~   96 (249)
T 3f9i_A           21 GASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT----SNLDILVCNAGITS   96 (249)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC----SCCSEEEECCC---
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc----CCCCEEEECCCCCC
Confidence            899999999999999999999999999988777654  357888999999999988877654    79999999999887


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ..++.+.+.++|+..+++|+.+++.++++++|.|++++.++||++||..+..+.++...|+++|+++++|+++++.|+++
T Consensus        97 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~  176 (249)
T 3f9i_A           97 DTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVAT  176 (249)
T ss_dssp             ----------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHHHHHHHHHHHHHHHHHHH
Confidence            77788889999999999999999999999999998888899999999999999999999999999999999999999999


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +|||
T Consensus       177 ~gi~  180 (249)
T 3f9i_A          177 RGIT  180 (249)
T ss_dssp             GTEE
T ss_pred             cCcE
Confidence            8875

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=1e-32  Score=198.50  Aligned_cols=161  Identities=20%  Similarity=0.266  Sum_probs=145.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC-CCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN-AGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~-ag~~   77 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++.+  ..++.++.+|++|.++++++++++ ++++++|++||| +|..
T Consensus        37 Gas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~-~~~~~id~lv~~aag~~  115 (281)
T 3ppi_A           37 GGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAA-NQLGRLRYAVVAHGGFG  115 (281)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH-TTSSEEEEEEECCCCCC
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH-HHhCCCCeEEEccCccc
Confidence            899999999999999999999999999888776654  357899999999999999999999 888999999999 5554


Q ss_pred             CCCCC-----CCCChHHHHHHHHhhhhhHHHHHHHHHHhHhh------cCCCeEEEeccccccCCCCCchhhhHhHHHHH
Q 042185           78 CVGPL-----AEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY------RKKGKIINVGSVTVAAPGPWAGTYTASKAALH  146 (162)
Q Consensus        78 ~~~~~-----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~------~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~  146 (162)
                      ...++     .+.+.++|++.+++|+.+++.+++.++|.|.+      ++.|+||++||..+..+.++...|+++|+|++
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  195 (281)
T 3ppi_A          116 VAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVI  195 (281)
T ss_dssp             CCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             ccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCCCcccHHHHHHHH
Confidence            44433     46889999999999999999999999999976      46789999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCCC
Q 042185          147 SLTDTLRLELGHFGID  162 (162)
Q Consensus       147 ~l~~~l~~e~~~~gi~  162 (162)
                      +|+++++.|++++|||
T Consensus       196 ~~~~~la~e~~~~gi~  211 (281)
T 3ppi_A          196 GLTIAAARDLSSAGIR  211 (281)
T ss_dssp             HHHHHHHHHHGGGTEE
T ss_pred             HHHHHHHHHHhhcCeE
Confidence            9999999999998875

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=7.6e-33  Score=199.54  Aligned_cols=162  Identities=23%  Similarity=0.329  Sum_probs=149.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+||||++++++|+++|++|++++|+.+.++++.+     ..++.++.+|++|.++++++++++.+.++++|++|||||
T Consensus        51 GasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~li~~Ag  130 (285)
T 2c07_A           51 GAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAG  130 (285)
T ss_dssp             STTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCC
T ss_pred             CCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            899999999999999999999999998776654432     356889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....++.+.+.++|+..+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|++++.|++.++.|
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e  210 (285)
T 2c07_A          131 ITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKE  210 (285)
T ss_dssp             CCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHHHHHHHHHHHHHHHH
Confidence            88777888999999999999999999999999999998777899999999999988899999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      +++.||+
T Consensus       211 ~~~~gi~  217 (285)
T 2c07_A          211 LASRNIT  217 (285)
T ss_dssp             HGGGTEE
T ss_pred             HHHhCcE
Confidence            9988874

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=7.7e-33  Score=196.52  Aligned_cols=157  Identities=27%  Similarity=0.335  Sum_probs=140.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||++|||++++++|+++|++|++++|+.+..+++.+    ...+..+     |.++++++++++.++++++|++|||||.
T Consensus         8 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD~lv~nAg~   82 (254)
T 1zmt_A            8 NVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM-----SEQEPAELIEAVTSAYGQVDVLVSNDIF   82 (254)
T ss_dssp             STTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCCEEEEECCC
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCCEEEECCCc
Confidence            899999999999999999999999998776554422    2233332     7778999999999999999999999998


Q ss_pred             C-CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           77 Q-CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        77 ~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      . ...++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.+....|+++|+++++|+++++.|
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e  162 (254)
T 1zmt_A           83 APEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKE  162 (254)
T ss_dssp             CCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence            7 667888999999999999999999999999999998888899999999999999999999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      ++++|||
T Consensus       163 ~~~~gi~  169 (254)
T 1zmt_A          163 LGEYNIP  169 (254)
T ss_dssp             HGGGTCC
T ss_pred             hhhcCcE
Confidence            9999986

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=3.9e-33  Score=198.76  Aligned_cols=160  Identities=18%  Similarity=0.239  Sum_probs=143.1

Q ss_pred             CCC--CchHHHHHHHHHHCCCeEEEEecChh---hHHhhhc-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQ--GGIGHALARAFAASDCRVVATGRSKA---TMADLEQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~--~giG~~ia~~l~~~g~~vi~~~r~~~---~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+  +|||++++++|+++|++|++++|+.+   .++++.. ...+.++.+|++|+++++++++++.++++++|++||||
T Consensus        15 Gas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~A   94 (261)
T 2wyu_A           15 GVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAI   94 (261)
T ss_dssp             SCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECC
T ss_pred             CCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            677  99999999999999999999999875   3333322 13478899999999999999999999999999999999


Q ss_pred             CCCCC----CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           75 GVQCV----GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        75 g~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      |....    .++.+.+.++|++.+++|+.+++.+++++.|.|++  +|+||++||..+..+.++...|+++|+++++|++
T Consensus        95 g~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~  172 (261)
T 2wyu_A           95 AFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNVMAIAKAALEASVR  172 (261)
T ss_dssp             CCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccccCCCCCchHHHHHHHHHHHHHH
Confidence            98653    57778999999999999999999999999999853  4899999999999999999999999999999999


Q ss_pred             HHHHHhccCCCC
Q 042185          151 TLRLELGHFGID  162 (162)
Q Consensus       151 ~l~~e~~~~gi~  162 (162)
                      .++.|++++|||
T Consensus       173 ~la~e~~~~gi~  184 (261)
T 2wyu_A          173 YLAYELGPKGVR  184 (261)
T ss_dssp             HHHHHHGGGTCE
T ss_pred             HHHHHHhhhCcE
Confidence            999999999885

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=3.2e-33  Score=201.48  Aligned_cols=158  Identities=26%  Similarity=0.414  Sum_probs=139.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecC------------hhhHHhhh-----cCCceeEEEeccCChHHHHHHHHHHHHH
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRS------------KATMADLE-----QDPRFFVQELDVLSEQSVQNVLSNVLEK   63 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~------------~~~~~~~~-----~~~~~~~~~~D~~~~~~i~~~~~~~~~~   63 (162)
                      ||++|||+++|++|+++|++|++++|+            .+.+++..     ...++.++.+|++|.++++++++++.++
T Consensus        17 Gas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   96 (287)
T 3pxx_A           17 GGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELANAVAE   96 (287)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            899999999999999999999999987            44444332     2467889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC-----------
Q 042185           64 FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG-----------  132 (162)
Q Consensus        64 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------  132 (162)
                      ++++|++|||||+....  .+.+.++|++.+++|+.+++.++++++|.|  .+.++||++||..+..+.           
T Consensus        97 ~g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~~~~~~~  172 (287)
T 3pxx_A           97 FGKLDVVVANAGICPLG--AHLPVQAFADAFDVDFVGVINTVHAALPYL--TSGASIITTGSVAGLIAAAQPPGAGGPQG  172 (287)
T ss_dssp             HSCCCEEEECCCCCCCC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGC--CTTCEEEEECCHHHHHHHHCCC-----CH
T ss_pred             cCCCCEEEECCCcCccc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHh--hcCcEEEEeccchhcccccccccccccCC
Confidence            99999999999986554  347899999999999999999999999998  456899999998877654           


Q ss_pred             CCchhhhHhHHHHHHHHHHHHHHhccCCCC
Q 042185          133 PWAGTYTASKAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       133 ~~~~~y~~sKaa~~~l~~~l~~e~~~~gi~  162 (162)
                      ++...|+++|+++++|+++++.|++++|||
T Consensus       173 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~  202 (287)
T 3pxx_A          173 PGGAGYSYAKQLVDSYTLQLAAQLAPQSIR  202 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred             CccchHHHHHHHHHHHHHHHHHHHhhcCcE
Confidence            667789999999999999999999999985

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=1.4e-32  Score=194.91  Aligned_cols=161  Identities=27%  Similarity=0.342  Sum_probs=146.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC--Cce-eEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRF-FVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~--~~~-~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      ||+||||++++++|+++|++|++++|+.+.+++..++  ..+ .++.+|++|.++++.+++++.+ ++++|++|||||..
T Consensus        18 GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~id~li~~Ag~~   96 (254)
T 2wsb_A           18 GAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEA-VAPVSILVNSAGIA   96 (254)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHH-HSCCCEEEECCCCC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHh-hCCCcEEEECCccC
Confidence            8999999999999999999999999998776655432  345 7899999999999999999988 89999999999988


Q ss_pred             CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCc--hhhhHhHHHHHHHHHHHHHH
Q 042185           78 CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWA--GTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~--~~y~~sKaa~~~l~~~l~~e  155 (162)
                      ...++.+.+.++|+..+++|+.+++.+++.++|.|++++.++||++||..+..+.+..  ..|+++|++++.+++.++.|
T Consensus        97 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~  176 (254)
T 2wsb_A           97 RLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAE  176 (254)
T ss_dssp             CCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence            7778888999999999999999999999999999988888999999999988887777  89999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      ++++||+
T Consensus       177 ~~~~gi~  183 (254)
T 2wsb_A          177 WAGRGVR  183 (254)
T ss_dssp             HGGGTEE
T ss_pred             HhhcCeE
Confidence            9988874

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=2.5e-32  Score=193.62  Aligned_cols=161  Identities=28%  Similarity=0.445  Sum_probs=147.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+||||++++++|+++|++|++++|+.+..+++.+     ..++.++.+|++|+++++++++++.++++++|++|||||
T Consensus        18 GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag   97 (255)
T 1fmc_A           18 GAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAG   97 (255)
T ss_dssp             TTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCC
T ss_pred             CCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            899999999999999999999999999876654432     356888999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....++ +.+.++|+..+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|++++.|++.++.|
T Consensus        98 ~~~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~  176 (255)
T 1fmc_A           98 GGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFD  176 (255)
T ss_dssp             CCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHHHHHHHHHHHHHHHH
Confidence            8766666 788999999999999999999999999998877899999999999999899999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      +++.||+
T Consensus       177 ~~~~~i~  183 (255)
T 1fmc_A          177 LGEKNIR  183 (255)
T ss_dssp             HHTTTEE
T ss_pred             hhhcCcE
Confidence            9988874

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=1e-32  Score=196.60  Aligned_cols=162  Identities=25%  Similarity=0.351  Sum_probs=146.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||++++++|+++|++|++++|+.+..++..+  ..++.++.+|++|+++++++++++.++++++|++|||||...
T Consensus        19 GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~   98 (265)
T 2o23_A           19 GGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAV   98 (265)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCccCC
Confidence            899999999999999999999999999876665443  357889999999999999999999999999999999999865


Q ss_pred             CCCCC------CCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc------CCCeEEEeccccccCCCCCchhhhHhHHHHH
Q 042185           79 VGPLA------EVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR------KKGKIINVGSVTVAAPGPWAGTYTASKAALH  146 (162)
Q Consensus        79 ~~~~~------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~  146 (162)
                      ..++.      +.+.++|+..+++|+.+++.+++++.|.|+++      +.++||++||..+..+.++...|+++|++++
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~  178 (265)
T 2o23_A           99 ASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIV  178 (265)
T ss_dssp             CCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred             CCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCCCCchhHHHHHHHH
Confidence            54444      37899999999999999999999999999876      6789999999999999899999999999999


Q ss_pred             HHHHHHHHHhccCCCC
Q 042185          147 SLTDTLRLELGHFGID  162 (162)
Q Consensus       147 ~l~~~l~~e~~~~gi~  162 (162)
                      .|++.++.|++++|||
T Consensus       179 ~~~~~la~e~~~~gi~  194 (265)
T 2o23_A          179 GMTLPIARDLAPIGIR  194 (265)
T ss_dssp             HHHHHHHHHHGGGTEE
T ss_pred             HHHHHHHHHHhhcCcE
Confidence            9999999999998875

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=1.5e-32  Score=196.50  Aligned_cols=159  Identities=21%  Similarity=0.350  Sum_probs=142.3

Q ss_pred             CC--CCchHHHHHHHHHHCCCeEEEEecChhh-HHhhhcC--CceeEEEeccCChHHHHHHHHHHHHHcC---CccEEEE
Q 042185            1 CS--QGGIGHALARAFAASDCRVVATGRSKAT-MADLEQD--PRFFVQELDVLSEQSVQNVLSNVLEKFG---KIDVLVN   72 (162)
Q Consensus         1 Ga--~~giG~~ia~~l~~~g~~vi~~~r~~~~-~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~---~id~vi~   72 (162)
                      ||  ++|||+++|++|+++|++|++++|+.+. ++++.++  .++.++.+|++|+++++++++++.+++|   ++|++||
T Consensus        14 Ga~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~~~iD~lv~   93 (269)
T 2h7i_A           14 GIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVH   93 (269)
T ss_dssp             CCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEE
T ss_pred             CCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence            56  8999999999999999999999998765 3554433  4678899999999999999999999999   9999999


Q ss_pred             CCCCCC-----CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHH
Q 042185           73 NAGVQC-----VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHS  147 (162)
Q Consensus        73 ~ag~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~  147 (162)
                      |||...     ..++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||... .+.+....|+++|+++++
T Consensus        94 nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~iss~~~-~~~~~~~~Y~asKaa~~~  170 (269)
T 2h7i_A           94 SIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGMDFDPS-RAMPAYNWMTVAKSALES  170 (269)
T ss_dssp             CCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECCCS-SCCTTTHHHHHHHHHHHH
T ss_pred             CCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCeEEEEcCccc-cccCchHHHHHHHHHHHH
Confidence            999865     467888999999999999999999999999999964  379999999776 677888999999999999


Q ss_pred             HHHHHHHHhccCCCC
Q 042185          148 LTDTLRLELGHFGID  162 (162)
Q Consensus       148 l~~~l~~e~~~~gi~  162 (162)
                      |+++++.|++++|||
T Consensus       171 l~~~la~e~~~~gi~  185 (269)
T 2h7i_A          171 VNRFVAREAGKYGVR  185 (269)
T ss_dssp             HHHHHHHHHHTTTCE
T ss_pred             HHHHHHHHhcccCcE
Confidence            999999999999986

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=2e-32  Score=196.38  Aligned_cols=162  Identities=27%  Similarity=0.410  Sum_probs=146.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+||||++++++|+++|++|++++|+.+..++...    ...+.++.+|++|+++++.+++++.++++++|++|||||.
T Consensus        23 GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~  102 (278)
T 2bgk_A           23 GGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGV  102 (278)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence            899999999999999999999999999776554432    2378899999999999999999999999999999999997


Q ss_pred             CC--CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCC-CchhhhHhHHHHHHHHHHHH
Q 042185           77 QC--VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGP-WAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        77 ~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-~~~~y~~sKaa~~~l~~~l~  153 (162)
                      ..  ..++.+.+.++|+..+++|+.+++.+++.+.|.|++++.++||++||..++.+.+ +...|+++|++++.|++.++
T Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la  182 (278)
T 2bgk_A          103 LSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLC  182 (278)
T ss_dssp             CCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchHHHHHHHHHHHHHHH
Confidence            64  2567888999999999999999999999999999887889999999999998887 78899999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       183 ~e~~~~gi~  191 (278)
T 2bgk_A          183 TELGEYGIR  191 (278)
T ss_dssp             HHHGGGTEE
T ss_pred             HHHhhcCcE
Confidence            999988874

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=6.1e-33  Score=195.96  Aligned_cols=162  Identities=27%  Similarity=0.382  Sum_probs=125.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEE-ecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVAT-GRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~-~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+||||++++++|+++|++|+++ .|+.+..++..+     ..++.++.+|++|+++++++++++.+.++++|++||||
T Consensus        12 GasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~A   91 (247)
T 2hq1_A           12 GSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNA   91 (247)
T ss_dssp             SCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            899999999999999999999998 666555443321     35688999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.++|+..+++|+.+++.+++.+.|.|++++.++||++||..+..+.+....|+++|++++.|++.++.
T Consensus        92 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~  171 (247)
T 2hq1_A           92 GITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAK  171 (247)
T ss_dssp             ---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHHHHHHHHHHHHHH
Confidence            98766777788899999999999999999999999999887789999999998988888999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |+++.||+
T Consensus       172 e~~~~gi~  179 (247)
T 2hq1_A          172 EFAAKGIY  179 (247)
T ss_dssp             HHGGGTEE
T ss_pred             HHHHcCcE
Confidence            99988874

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=9.3e-33  Score=197.90  Aligned_cols=162  Identities=25%  Similarity=0.346  Sum_probs=147.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+||||++++++|+++|++|++++|+.+..+++.+     ..++.++.+|++|.++++.+++++.+.++++|++|||||
T Consensus        38 GasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~li~~Ag  117 (272)
T 1yb1_A           38 GAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAG  117 (272)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCC
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCC
Confidence            899999999999999999999999999876665432     357889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....++.+.+.++|+..+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|++++.|++.++.|
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e  197 (272)
T 1yb1_A          118 VVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDE  197 (272)
T ss_dssp             CCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHHHHHHHHHHHHHHHHH
Confidence            87777788888999999999999999999999999998888899999999999988888899999999999999999999


Q ss_pred             hc---cCCCC
Q 042185          156 LG---HFGID  162 (162)
Q Consensus       156 ~~---~~gi~  162 (162)
                      ++   +.|||
T Consensus       198 ~~~~~~~gi~  207 (272)
T 1yb1_A          198 LAALQITGVK  207 (272)
T ss_dssp             HHHTTCTTEE
T ss_pred             HHHhCCCCeE
Confidence            97   55664

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-32  Score=195.49  Aligned_cols=162  Identities=28%  Similarity=0.392  Sum_probs=146.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+||||++++++|+++|++|++++|+.+.++++.+       ...+.++.+|++|+++++.+++++.+.++++|++|||
T Consensus        39 GasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~vi~~  118 (279)
T 1xg5_A           39 GASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINN  118 (279)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEEC
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            899999999999999999999999999876665432       1457889999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC--CCeEEEecccccc--CCCCCchhhhHhHHHHHHHH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK--KGKIINVGSVTVA--APGPWAGTYTASKAALHSLT  149 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~isS~~~~--~~~~~~~~y~~sKaa~~~l~  149 (162)
                      ||.....++.+.+.++|+..+++|+.+++.+++.++|.|++++  +++||++||..+.  .+.++...|+++|++++.|+
T Consensus       119 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~  198 (279)
T 1xg5_A          119 AGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALT  198 (279)
T ss_dssp             CCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCchhHHHHHHHHHHH
Confidence            9987777888899999999999999999999999999998765  3899999999887  56777889999999999999


Q ss_pred             HHHHHHhc--cCCCC
Q 042185          150 DTLRLELG--HFGID  162 (162)
Q Consensus       150 ~~l~~e~~--~~gi~  162 (162)
                      +.++.|++  +.|||
T Consensus       199 ~~la~e~~~~~~~i~  213 (279)
T 1xg5_A          199 EGLRQELREAQTHIR  213 (279)
T ss_dssp             HHHHHHHHHTTCCCE
T ss_pred             HHHHHHHhhcCCCeE
Confidence            99999998  77775

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=1.6e-32  Score=193.59  Aligned_cols=162  Identities=24%  Similarity=0.351  Sum_probs=147.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEE-ecChhhHHhhhc-----CCceeE-EEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVAT-GRSKATMADLEQ-----DPRFFV-QELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~-~r~~~~~~~~~~-----~~~~~~-~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+||||++++++|+++|++|+++ +|+.+..+++.+     ...+.+ +.+|++|.++++.+++++.+.++++|++|||
T Consensus         8 GasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~   87 (245)
T 2ph3_A            8 GASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGLDTLVNN   87 (245)
T ss_dssp             TTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCCCEEEEC
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            899999999999999999999988 898776655432     245566 8999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      ||.....++.+.+.++|+..+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|++++.+++.++
T Consensus        88 Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la  167 (245)
T 2ph3_A           88 AGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVA  167 (245)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHHHHHHHHHHH
Confidence            99877777888999999999999999999999999999988778999999999888888899999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|+++.||+
T Consensus       168 ~e~~~~gi~  176 (245)
T 2ph3_A          168 KEYAQRGIT  176 (245)
T ss_dssp             HHHGGGTEE
T ss_pred             HHHHHcCeE
Confidence            999988874

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5.2e-32  Score=191.19  Aligned_cols=162  Identities=25%  Similarity=0.339  Sum_probs=147.3

Q ss_pred             CCCCchHHHHHHHHHHCC--CeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcC--CccEEEECC
Q 042185            1 CSQGGIGHALARAFAASD--CRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFG--KIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g--~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--~id~vi~~a   74 (162)
                      ||+||||++++++|+++|  ++|++++|+.+..+++.+  ..++.++.+|++++++++.+++++.++++  ++|++||||
T Consensus        10 GasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~id~li~~A   89 (250)
T 1yo6_A           10 GANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNA   89 (250)
T ss_dssp             SCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECC
T ss_pred             cCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCCCcEEEECC
Confidence            899999999999999999  999999999877665543  35788999999999999999999999998  999999999


Q ss_pred             CCCC-CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc------C-----CCeEEEeccccccCCC-------CCc
Q 042185           75 GVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR------K-----KGKIINVGSVTVAAPG-------PWA  135 (162)
Q Consensus        75 g~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~-----~~~iv~isS~~~~~~~-------~~~  135 (162)
                      |... ..++.+.+.++|+..+++|+.+++.++++++|.|+++      +     .++||++||..+..+.       ++.
T Consensus        90 g~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~  169 (250)
T 1yo6_A           90 GVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPV  169 (250)
T ss_dssp             CCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCSTTSSSCB
T ss_pred             cccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCcccccccCCc
Confidence            9876 6788889999999999999999999999999999776      5     7899999999888776       577


Q ss_pred             hhhhHhHHHHHHHHHHHHHHhccCCCC
Q 042185          136 GTYTASKAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       136 ~~y~~sKaa~~~l~~~l~~e~~~~gi~  162 (162)
                      ..|+++|++++.|++.++.|+++.|||
T Consensus       170 ~~Y~~sK~a~~~~~~~la~e~~~~gi~  196 (250)
T 1yo6_A          170 LAYRMSKAAINMFGRTLAVDLKDDNVL  196 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTCE
T ss_pred             cHHHHHHHHHHHHHHHHHHHhccCCeE
Confidence            899999999999999999999988875

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=6.2e-33  Score=198.09  Aligned_cols=160  Identities=13%  Similarity=0.177  Sum_probs=141.4

Q ss_pred             CCC--CchHHHHHHHHHHCCCeEEEEecCh---hhHHhhhcC-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQ--GGIGHALARAFAASDCRVVATGRSK---ATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~--~giG~~ia~~l~~~g~~vi~~~r~~---~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+  +|||++++++|+++|++|++++|+.   +.++++..+ ....++.+|++|+++++++++++.++++++|++||||
T Consensus        16 Gas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~A   95 (265)
T 1qsg_A           16 GVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSI   95 (265)
T ss_dssp             CCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSEEEEEECC
T ss_pred             CCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            777  9999999999999999999999987   333333221 3347899999999999999999999999999999999


Q ss_pred             CCCCC----CCCCC-CChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHH
Q 042185           75 GVQCV----GPLAE-VPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLT  149 (162)
Q Consensus        75 g~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~  149 (162)
                      |....    .++.+ .+.++|++.+++|+.+++.++++++|.|++  +|+||++||..+..+.++...|+++|+++++|+
T Consensus        96 g~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~  173 (265)
T 1qsg_A           96 GFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMGLAKASLEANV  173 (265)
T ss_dssp             CCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHH
T ss_pred             CCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhhccCCCCchHHHHHHHHHHHHH
Confidence            98653    56667 899999999999999999999999999863  489999999999999999999999999999999


Q ss_pred             HHHHHHhccCCCC
Q 042185          150 DTLRLELGHFGID  162 (162)
Q Consensus       150 ~~l~~e~~~~gi~  162 (162)
                      ++++.|++++|||
T Consensus       174 ~~la~e~~~~gi~  186 (265)
T 1qsg_A          174 RYMANAMGPEGVR  186 (265)
T ss_dssp             HHHHHHHTTTTEE
T ss_pred             HHHHHHhhhcCeE
Confidence            9999999998875

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=3e-32  Score=197.66  Aligned_cols=162  Identities=15%  Similarity=0.288  Sum_probs=148.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+||||++++++|+++|++|++++|+.+.+++..+      ..++.++.+|++|.++++++++++.+.++++|++||||
T Consensus        33 GasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~A  112 (302)
T 1w6u_A           33 GGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNA  112 (302)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECC
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            899999999999999999999999999876655432      35688999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHh-hcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMA-YRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      |.....++.+.+.++|+..+++|+.+++.+++.++|.|. +++.++||++||..+..+.++...|+++|++++.|++.++
T Consensus       113 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la  192 (302)
T 1w6u_A          113 AGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLA  192 (302)
T ss_dssp             CCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhHHHHHHHHHHHHHHH
Confidence            987777888899999999999999999999999999997 4456899999999999888999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .+++++|||
T Consensus       193 ~~~~~~gi~  201 (302)
T 1w6u_A          193 AEWGKYGMR  201 (302)
T ss_dssp             HHHGGGTEE
T ss_pred             HHhhhcCcE
Confidence            999988874

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=5.4e-33  Score=203.87  Aligned_cols=160  Identities=31%  Similarity=0.430  Sum_probs=143.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhh-----------cCCceeEEEeccCChHHHHHHHHHHHHHcCCccE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLE-----------QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDV   69 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~-----------~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~   69 (162)
                      ||++|||+++|++|+++|++|++++|+.+..++..           ...++.++.+|++|.++++.+++++.  ++++|+
T Consensus         9 Gas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~--~g~iD~   86 (327)
T 1jtv_A            9 GCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT--EGRVDV   86 (327)
T ss_dssp             CCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT--TSCCSE
T ss_pred             CCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh--cCCCCE
Confidence            89999999999999999999988887644332211           12568899999999999999999883  589999


Q ss_pred             EEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHH
Q 042185           70 LVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLT  149 (162)
Q Consensus        70 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~  149 (162)
                      +|||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++.++||++||..+..+.+....|++||+++++|+
T Consensus        87 lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~aSK~a~~~~~  166 (327)
T 1jtv_A           87 LVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLC  166 (327)
T ss_dssp             EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHHHHHHHHHHH
Confidence            99999987777888899999999999999999999999999998878899999999999999999999999999999999


Q ss_pred             HHHHHHhccCCCC
Q 042185          150 DTLRLELGHFGID  162 (162)
Q Consensus       150 ~~l~~e~~~~gi~  162 (162)
                      +.++.|++++|||
T Consensus       167 ~~la~el~~~gI~  179 (327)
T 1jtv_A          167 ESLAVLLLPFGVH  179 (327)
T ss_dssp             HHHHHHHGGGTEE
T ss_pred             HHHHHHhhhcCcE
Confidence            9999999998875

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1.4e-32  Score=215.36  Aligned_cols=160  Identities=24%  Similarity=0.390  Sum_probs=141.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh-hh-HHhhhc-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK-AT-MADLEQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~-~~-~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      ||++|||+++|+.|+++|++|++.+++. +. .+++.. ..+.....+|++  ++.+++++++.+++|++|++|||||+.
T Consensus       329 Gas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~G~iDiLVnNAGi~  406 (604)
T 2et6_A          329 GAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKYGTIDILVNNAGIL  406 (604)
T ss_dssp             SCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             CcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence            8999999999999999999999998632 22 223322 345667778884  556788999999999999999999998


Q ss_pred             CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhc
Q 042185           78 CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                      ...++.+++.++|++++++|+.+++.++++++|+|+++++|+||++||.++..+.++...|++||+|+.+|+++|+.|++
T Consensus       407 ~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKaal~~lt~~la~El~  486 (604)
T 2et6_A          407 RDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGA  486 (604)
T ss_dssp             CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHHHHHHHHHHHHHHhC
Confidence            77889999999999999999999999999999999888889999999999999999999999999999999999999999


Q ss_pred             cCCCC
Q 042185          158 HFGID  162 (162)
Q Consensus       158 ~~gi~  162 (162)
                      ++|||
T Consensus       487 ~~gIr  491 (604)
T 2et6_A          487 KNNIK  491 (604)
T ss_dssp             GGTEE
T ss_pred             ccCeE
Confidence            99986

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=1.2e-32  Score=209.51  Aligned_cols=162  Identities=26%  Similarity=0.375  Sum_probs=148.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh--hhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCC-ccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK--ATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGK-IDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~--~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~-id~vi~~ag~~   77 (162)
                      ||++|||+++|++|+++|++|++++|+.  +.+++...+....++.||++|.++++++++++.+++++ +|++|||||+.
T Consensus       220 GgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~lV~nAGv~  299 (454)
T 3u0b_A          220 GAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGIT  299 (454)
T ss_dssp             SCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSEEEECCCCC
T ss_pred             CCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceEEEECCccc
Confidence            8999999999999999999999999964  23333333445678999999999999999999999986 99999999998


Q ss_pred             CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhc
Q 042185           78 CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                      ...++.+++.++|++++++|+.+++.+++.+.+.|.+++.++||++||..+..+.+++..|+++|+++++|+++++.|++
T Consensus       300 ~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasKaal~~l~~~la~e~~  379 (454)
T 3u0b_A          300 RDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLA  379 (454)
T ss_dssp             CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence            88889999999999999999999999999999999877889999999999999999999999999999999999999999


Q ss_pred             cCCCC
Q 042185          158 HFGID  162 (162)
Q Consensus       158 ~~gi~  162 (162)
                      ++|||
T Consensus       380 ~~gI~  384 (454)
T 3u0b_A          380 DKGIT  384 (454)
T ss_dssp             TTTCE
T ss_pred             hcCcE
Confidence            99985

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=5.9e-33  Score=195.73  Aligned_cols=155  Identities=16%  Similarity=0.187  Sum_probs=141.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHc--CCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF--GKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--~~id~vi~~ag~~~   78 (162)
                      ||++|||++++++|+++|++|++++|+.+..+     ....++.+|++|+++++++++++.+++  +++|++|||||...
T Consensus        14 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~   88 (241)
T 1dhr_A           14 GGRGALGSRCVQAFRARNWWVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWA   88 (241)
T ss_dssp             TTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCC
T ss_pred             CCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEcccccC
Confidence            89999999999999999999999999876532     235678899999999999999999999  79999999999877


Q ss_pred             CCCC-CCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhc
Q 042185           79 VGPL-AEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus        79 ~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                      ..++ .+.+.++|++.+++|+.+++.+++++.|.|++  +|+||++||..+..+.++...|+++|+++++|+++++.|++
T Consensus        89 ~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~  166 (241)
T 1dhr_A           89 GGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNS  166 (241)
T ss_dssp             CBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHTSTTS
T ss_pred             CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHHHccCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence            6777 78889999999999999999999999999854  48999999999999999999999999999999999999999


Q ss_pred             --cCCCC
Q 042185          158 --HFGID  162 (162)
Q Consensus       158 --~~gi~  162 (162)
                        ++|||
T Consensus       167 ~~~~gi~  173 (241)
T 1dhr_A          167 GMPSGAA  173 (241)
T ss_dssp             SCCTTCE
T ss_pred             cCCCCeE
Confidence              88885

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=1e-32  Score=194.80  Aligned_cols=153  Identities=20%  Similarity=0.330  Sum_probs=139.1

Q ss_pred             CCCCchHHHHHHHHHH-CCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAA-SDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~-~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      ||++|||+++|++|++ .|++|++++|+.+.     ....+.++.+|++|.++++++++.+.  ++++|++|||||....
T Consensus        11 Gas~gIG~~~a~~l~~~~g~~v~~~~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~id~lv~nAg~~~~   83 (244)
T 4e4y_A           11 GGSKGIGKAVVELLLQNKNHTVINIDIQQSF-----SAENLKFIKADLTKQQDITNVLDIIK--NVSFDGIFLNAGILIK   83 (244)
T ss_dssp             TTTSHHHHHHHHHHTTSTTEEEEEEESSCCC-----CCTTEEEEECCTTCHHHHHHHHHHTT--TCCEEEEEECCCCCCC
T ss_pred             CCCChHHHHHHHHHHhcCCcEEEEecccccc-----ccccceEEecCcCCHHHHHHHHHHHH--hCCCCEEEECCccCCC
Confidence            8999999999999999 78899999997652     12356899999999999999995553  7899999999999888


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccC
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHF  159 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~  159 (162)
                      .++.+.+.++|++.+++|+.+++.+++++.|.|+++  ++||++||..+..+.++...|++||+++++|+++++.|++++
T Consensus        84 ~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~  161 (244)
T 4e4y_A           84 GSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKY  161 (244)
T ss_dssp             BCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGGTCCCTTBHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHHccCCCCCchhHHHHHHHHHHHHHHHHHHHHc
Confidence            889999999999999999999999999999998654  799999999999999999999999999999999999999999


Q ss_pred             CCC
Q 042185          160 GID  162 (162)
Q Consensus       160 gi~  162 (162)
                      |||
T Consensus       162 gi~  164 (244)
T 4e4y_A          162 QIR  164 (244)
T ss_dssp             TCE
T ss_pred             CeE
Confidence            985

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=2.5e-32  Score=198.44  Aligned_cols=158  Identities=25%  Similarity=0.370  Sum_probs=139.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc------CCceeEEEeccCCh-HHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ------DPRFFVQELDVLSE-QSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~------~~~~~~~~~D~~~~-~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||++|||+++|++|+++|++|++++|+.+..++..+      ..++.++.+|+++. ++++.+++.+.++++++|++|||
T Consensus        19 Gas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~iD~lv~n   98 (311)
T 3o26_A           19 GGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNN   98 (311)
T ss_dssp             SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEEC
T ss_pred             cCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            899999999999999999999999999876655432      24788999999998 99999999999999999999999


Q ss_pred             CCCCCC------------------------------CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEe
Q 042185           74 AGVQCV------------------------------GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV  123 (162)
Q Consensus        74 ag~~~~------------------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~i  123 (162)
                      ||+...                              .++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++
T Consensus        99 Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~~IV~i  178 (311)
T 3o26_A           99 AGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNV  178 (311)
T ss_dssp             CCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEE
T ss_pred             CcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccCCCCeEEEE
Confidence            998632                              24556789999999999999999999999999988888999999


Q ss_pred             ccccccCCC-------------------------------------------CCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185          124 GSVTVAAPG-------------------------------------------PWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus       124 sS~~~~~~~-------------------------------------------~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ||..+..+.                                           ++...|++||+++++|++.++.|+++
T Consensus       179 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~e~~~  256 (311)
T 3o26_A          179 SSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLANKIPK  256 (311)
T ss_dssp             CCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             ecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHHHHhhcCC
Confidence            999876543                                           45678999999999999999999864

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=2.6e-32  Score=193.60  Aligned_cols=160  Identities=24%  Similarity=0.343  Sum_probs=143.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEE-ecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcC------Ccc
Q 042185            1 CSQGGIGHALARAFAASDCRVVAT-GRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFG------KID   68 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~-~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~------~id   68 (162)
                      ||++|||+++|++|+++|++|+++ .|+.+..++...     ...+.++.+|+++.++++.+++++.+.++      ++|
T Consensus        14 Gas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~id   93 (255)
T 3icc_A           14 GASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFD   93 (255)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHHHHSSSCEE
T ss_pred             CCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcccccCCccc
Confidence            899999999999999999999885 666655544322     35788999999999999999999988764      499


Q ss_pred             EEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHH
Q 042185           69 VLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSL  148 (162)
Q Consensus        69 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l  148 (162)
                      ++|||||.....++.+.+.++|++.+++|+.+++.+++.++|.|+  +.++||++||..+..+.+....|+++|+++++|
T Consensus        94 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  171 (255)
T 3icc_A           94 ILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLR--DNSRIINISSAATRISLPDFIAYSMTKGAINTM  171 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEE--EEEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhC--CCCEEEEeCChhhccCCCCcchhHHhHHHHHHH
Confidence            999999998778888999999999999999999999999999983  357999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCCC
Q 042185          149 TDTLRLELGHFGID  162 (162)
Q Consensus       149 ~~~l~~e~~~~gi~  162 (162)
                      +++++.|++++|||
T Consensus       172 ~~~la~e~~~~gi~  185 (255)
T 3icc_A          172 TFTLAKQLGARGIT  185 (255)
T ss_dssp             HHHHHHHHGGGTCE
T ss_pred             HHHHHHHHHhcCeE
Confidence            99999999999885

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=9.8e-33  Score=194.01  Aligned_cols=155  Identities=17%  Similarity=0.194  Sum_probs=141.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHc--CCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF--GKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--~~id~vi~~ag~~~   78 (162)
                      ||++|||++++++|+++|++|++++|+.+..+     ....++.+|++|+++++++++++.+.+  +++|++|||||...
T Consensus        10 Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~   84 (236)
T 1ooe_A           10 GGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWA   84 (236)
T ss_dssp             TTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEecCccccc-----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCcccC
Confidence            89999999999999999999999999876532     235677899999999999999999999  79999999999877


Q ss_pred             CCCC-CCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhc
Q 042185           79 VGPL-AEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus        79 ~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                      ..++ .+.+.++|++.+++|+.+++.+++.+.|.|++  .++||++||..+..+.++...|+++|+++++|+++++.|++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~  162 (236)
T 1ooe_A           85 GGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDS  162 (236)
T ss_dssp             CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHHSTTS
T ss_pred             CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHhc
Confidence            6677 77889999999999999999999999999854  47999999999999999999999999999999999999998


Q ss_pred             --cCCCC
Q 042185          158 --HFGID  162 (162)
Q Consensus       158 --~~gi~  162 (162)
                        ++|||
T Consensus       163 ~~~~gi~  169 (236)
T 1ooe_A          163 GLPDNSA  169 (236)
T ss_dssp             SCCTTCE
T ss_pred             ccCCCeE
Confidence              88885

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=5.9e-32  Score=190.67  Aligned_cols=158  Identities=30%  Similarity=0.431  Sum_probs=142.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      ||+||||++++++|+++|++|++++|+.+.++++..+ ....++.+|++|+++++++++    .++++|++|||||....
T Consensus        14 GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~~~id~vi~~Ag~~~~   89 (244)
T 3d3w_A           14 GAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALG----SVGPVDLLVNNAAVALL   89 (244)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT----TCCCCCEEEECCCCCCC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHH----HcCCCCEEEECCccCCC
Confidence            8999999999999999999999999998877665432 246677999999999888876    56899999999998777


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      .++.+.+.++|+..+++|+.+++.+++++.|.|++++ .++||++||..+..+.++...|+++|++++.|++.++.|+++
T Consensus        90 ~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~  169 (244)
T 3d3w_A           90 QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGP  169 (244)
T ss_dssp             BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             cchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHHHHHHHHHHHHHHHhcc
Confidence            7888899999999999999999999999999998766 789999999999999999999999999999999999999998


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +|||
T Consensus       170 ~~i~  173 (244)
T 3d3w_A          170 HKIR  173 (244)
T ss_dssp             GTEE
T ss_pred             cCeE
Confidence            8874

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=3.4e-32  Score=193.12  Aligned_cols=162  Identities=29%  Similarity=0.390  Sum_probs=145.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecC-hhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRS-KATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~-~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+||||++++++|+++|++|++++|+ .+.++++..     ..++.++.+|++|+++++.+++++.++++++|++||||
T Consensus        14 GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~A   93 (258)
T 3afn_B           14 GSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGIDVLINNA   93 (258)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECC
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            899999999999999999999999998 665554322     35788999999999999999999999999999999999


Q ss_pred             CC-CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC--C---CeEEEeccccccC-CCCCchhhhHhHHHHHH
Q 042185           75 GV-QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK--K---GKIINVGSVTVAA-PGPWAGTYTASKAALHS  147 (162)
Q Consensus        75 g~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~---~~iv~isS~~~~~-~~~~~~~y~~sKaa~~~  147 (162)
                      |. ....++.+.+.++|+..+++|+.+++.++++++|.|++++  .   ++||++||..+.. +.++...|+++|++++.
T Consensus        94 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~  173 (258)
T 3afn_B           94 GGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHN  173 (258)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCHHHHHHHHHHHH
T ss_pred             CCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCchHHHHHHHHHHH
Confidence            97 5667788899999999999999999999999999987543  3   8999999998887 78889999999999999


Q ss_pred             HHHHHHHHhccCCCC
Q 042185          148 LTDTLRLELGHFGID  162 (162)
Q Consensus       148 l~~~l~~e~~~~gi~  162 (162)
                      |++.++.|+++.||+
T Consensus       174 ~~~~~~~e~~~~gi~  188 (258)
T 3afn_B          174 VHKNWVDFHTKDGVR  188 (258)
T ss_dssp             HHHHHHHHHGGGTEE
T ss_pred             HHHHHHHhhcccCeE
Confidence            999999999988874

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=7.4e-32  Score=192.13  Aligned_cols=162  Identities=28%  Similarity=0.354  Sum_probs=143.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHh----hhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMAD----LEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~----~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+||||++++++|+++|++|++++|+.+...+    +..  ..++.++.+|++|.++++.+++++.++++++|++||||
T Consensus        21 GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~A  100 (265)
T 1h5q_A           21 GGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANA  100 (265)
T ss_dssp             TTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECC
T ss_pred             CCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            899999999999999999999999997544332    211  45788999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCC-------chhhhHhHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPW-------AGTYTASKAALH  146 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~-------~~~y~~sKaa~~  146 (162)
                      |.....++.+.+.++|+..+++|+.+++.+++++.|.|.+++ .++||++||..+..+.+.       ...|+++|++++
T Consensus       101 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~  180 (265)
T 1h5q_A          101 GVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACS  180 (265)
T ss_dssp             CCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHHHHHHHHH
T ss_pred             CcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccccccccHHHHHHHH
Confidence            988777888899999999999999999999999999997665 489999999888766542       678999999999


Q ss_pred             HHHHHHHHHhccCCCC
Q 042185          147 SLTDTLRLELGHFGID  162 (162)
Q Consensus       147 ~l~~~l~~e~~~~gi~  162 (162)
                      .|++.++.|++++|||
T Consensus       181 ~~~~~la~e~~~~gi~  196 (265)
T 1h5q_A          181 NLVKGLAAEWASAGIR  196 (265)
T ss_dssp             HHHHHHHHHHGGGTEE
T ss_pred             HHHHHHHHHHHhcCcE
Confidence            9999999999988874

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=7.9e-32  Score=193.54  Aligned_cols=160  Identities=25%  Similarity=0.320  Sum_probs=142.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+||||++++++|+++|++|++++|+.+..+++.+     ..++.++.+|++|.++++.+++++.+.++++|++|||||
T Consensus        41 GasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag  120 (279)
T 3ctm_A           41 GSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAG  120 (279)
T ss_dssp             TTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECGG
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCc
Confidence            899999999999999999999999998765444322     356889999999999999999999999999999999999


Q ss_pred             CCCC-CCCC-CCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC--CCCchhhhHhHHHHHHHHHH
Q 042185           76 VQCV-GPLA-EVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP--GPWAGTYTASKAALHSLTDT  151 (162)
Q Consensus        76 ~~~~-~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~~~y~~sKaa~~~l~~~  151 (162)
                      .... .++. +.+.++|+..+++|+.+++.+++.++|.|++++.++||++||..+..+  .++...|+++|++++.|++.
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~  200 (279)
T 3ctm_A          121 VTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKS  200 (279)
T ss_dssp             GSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHHHHHHHHHHHHHHH
T ss_pred             ccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccHHHHHHHHHHHHHH
Confidence            8765 6666 788999999999999999999999999998877899999999998887  78889999999999999999


Q ss_pred             HHHHhccCC
Q 042185          152 LRLELGHFG  160 (162)
Q Consensus       152 l~~e~~~~g  160 (162)
                      ++.|+++.|
T Consensus       201 la~e~~~~~  209 (279)
T 3ctm_A          201 LAIEWAPFA  209 (279)
T ss_dssp             HHHHTTTTC
T ss_pred             HHHHhcccC
Confidence            999998765

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=3.6e-32  Score=198.82  Aligned_cols=162  Identities=25%  Similarity=0.302  Sum_probs=142.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEec---------ChhhHHhhhcCC--ceeEEEeccCChHHHHHHHHHHHHHcCCccE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGR---------SKATMADLEQDP--RFFVQELDVLSEQSVQNVLSNVLEKFGKIDV   69 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r---------~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~   69 (162)
                      ||++|||++++++|+++|++|++.++         +.+..+++.++.  ......+|+++.++++++++++.+.++++|+
T Consensus        16 Gas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   95 (319)
T 1gz6_A           16 GAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTALDTFGRIDV   95 (319)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHHHHTSCCCE
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            89999999999999999999999754         555444332210  0112358999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHH
Q 042185           70 LVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLT  149 (162)
Q Consensus        70 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~  149 (162)
                      +|||||+....++.+.+.++|+..+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|++||+++..|+
T Consensus        96 lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~~~~Y~aSK~a~~~~~  175 (319)
T 1gz6_A           96 VVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLA  175 (319)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCCHHHHHHHHHHHHHH
Confidence            99999987777788899999999999999999999999999998888899999999988888889999999999999999


Q ss_pred             HHHHHHhccCCCC
Q 042185          150 DTLRLELGHFGID  162 (162)
Q Consensus       150 ~~l~~e~~~~gi~  162 (162)
                      +.++.|++++|||
T Consensus       176 ~~la~el~~~gI~  188 (319)
T 1gz6_A          176 NTLVIEGRKNNIH  188 (319)
T ss_dssp             HHHHHHTGGGTEE
T ss_pred             HHHHHHhcccCEE
Confidence            9999999999875

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-31  Score=194.06  Aligned_cols=161  Identities=27%  Similarity=0.395  Sum_probs=145.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc----------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ----------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVL   70 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~v   70 (162)
                      ||+||||++++++|+++|++|++++|+.+.++++.+          ..++.++.+|+++.++++.+++++.+.++++|++
T Consensus        25 GasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l  104 (303)
T 1yxm_A           25 GGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFL  104 (303)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            899999999999999999999999999876654321          3578899999999999999999999999999999


Q ss_pred             EECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           71 VNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      |||||.....++.+.+.++|+..+++|+.+++.+++++.|.+.+++.++||++||.. ..+.+....|+++|+++.+|++
T Consensus       105 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~~Y~~sK~a~~~~~~  183 (303)
T 1yxm_A          105 VNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAVHSGAARAGVYNLTK  183 (303)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTCHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcchhhHHHHHHHHHHHH
Confidence            999998766778889999999999999999999999999965555578999999988 7788889999999999999999


Q ss_pred             HHHHHhccCCCC
Q 042185          151 TLRLELGHFGID  162 (162)
Q Consensus       151 ~l~~e~~~~gi~  162 (162)
                      .++.|+++.|||
T Consensus       184 ~la~e~~~~gi~  195 (303)
T 1yxm_A          184 SLALEWACSGIR  195 (303)
T ss_dssp             HHHHHTGGGTEE
T ss_pred             HHHHHhcccCeE
Confidence            999999988874

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-31  Score=188.81  Aligned_cols=158  Identities=30%  Similarity=0.442  Sum_probs=142.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      ||+||||++++++|+++|++|++++|+.+..++...+ ....++.+|++|+++++++++    .++++|++|||||....
T Consensus        14 GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~~~id~vi~~Ag~~~~   89 (244)
T 1cyd_A           14 GAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALG----GIGPVDLLVNNAALVIM   89 (244)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT----TCCCCSEEEECCCCCCC
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHH----HcCCCCEEEECCcccCC
Confidence            8999999999999999999999999998877655432 356677999999999888876    56899999999998777


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      .++.+.+.++|+..+++|+.+++.+++++.|.|.+++ .++||++||..++.+.++...|+++|++++.|++.++.|+++
T Consensus        90 ~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~  169 (244)
T 1cyd_A           90 QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGP  169 (244)
T ss_dssp             BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHHHHHhhh
Confidence            7788899999999999999999999999999998776 789999999999999999999999999999999999999998


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      .||+
T Consensus       170 ~gi~  173 (244)
T 1cyd_A          170 HKIR  173 (244)
T ss_dssp             GTEE
T ss_pred             cCeE
Confidence            8874

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=4e-32  Score=192.56  Aligned_cols=153  Identities=18%  Similarity=0.213  Sum_probs=139.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||++|||+++|++|+++|++|++++|+.+..+       ...+.+|++|.++++++++++.++++++|++|||||.....
T Consensus        29 Gas~gIG~~la~~l~~~G~~V~~~~r~~~~~~-------~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~  101 (251)
T 3orf_A           29 GGSGALGAEVVKFFKSKSWNTISIDFRENPNA-------DHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGG  101 (251)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS-------SEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCCCCB
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------ccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCC
Confidence            89999999999999999999999999876532       24578999999999999999999999999999999987655


Q ss_pred             C-CCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhc--
Q 042185           81 P-LAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG--  157 (162)
Q Consensus        81 ~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~--  157 (162)
                      + +.+.+.++|++.+++|+.+++.++++++|.|++  +|+||++||..+..+.++...|+++|++++.|++.++.|++  
T Consensus       102 ~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~  179 (251)
T 3orf_A          102 NASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGL  179 (251)
T ss_dssp             CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHTSTTSSS
T ss_pred             CcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechhhccCCCCCchhHHHHHHHHHHHHHHHHHhccc
Confidence            4 678889999999999999999999999999854  57999999999999999999999999999999999999987  


Q ss_pred             cCCCC
Q 042185          158 HFGID  162 (162)
Q Consensus       158 ~~gi~  162 (162)
                      +.|||
T Consensus       180 ~~gi~  184 (251)
T 3orf_A          180 PAGST  184 (251)
T ss_dssp             CTTCE
T ss_pred             CCCcE
Confidence            88875

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=3.3e-31  Score=191.03  Aligned_cols=160  Identities=21%  Similarity=0.278  Sum_probs=142.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC------CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC-
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN-   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~-   73 (162)
                      ||+||||++++++|+++|++|++++|+.+.++++.++      ..+.++.+|++|.++++.+++++.+.++++|++||| 
T Consensus        35 GasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~li~na  114 (286)
T 1xu9_A           35 GASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNH  114 (286)
T ss_dssp             SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            8999999999999999999999999998877655331      368899999999999999999999999999999999 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      +|... .++.+.+.++|+..+++|+.+++.++++++|.|+++ .++||++||..+..+.++...|+++|++++.|+++++
T Consensus       115 ag~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~  192 (286)
T 1xu9_A          115 ITNTS-LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIR  192 (286)
T ss_dssp             CCCCC-CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCC-CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccccCCCCccHHHHHHHHHHHHHHHHH
Confidence            56543 345567899999999999999999999999998654 5899999999999999999999999999999999999


Q ss_pred             HHh--ccCCCC
Q 042185          154 LEL--GHFGID  162 (162)
Q Consensus       154 ~e~--~~~gi~  162 (162)
                      .|+  ...||+
T Consensus       193 ~e~~~~~~~i~  203 (286)
T 1xu9_A          193 KEYSVSRVNVS  203 (286)
T ss_dssp             HHHHHHTCCCE
T ss_pred             HHHhhcCCCeE
Confidence            999  566664

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=7.2e-33  Score=195.66  Aligned_cols=159  Identities=26%  Similarity=0.350  Sum_probs=126.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||++|||+++|++|++ |++|++++|+.+.++++.+...+.++.+|+++.++ ...+.+..+.++++|++|||||.....
T Consensus        12 Gas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~id~lv~~Ag~~~~~   89 (245)
T 3e9n_A           12 GATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVL-EEGGVDKLKNLDHVDTLVHAAAVARDT   89 (245)
T ss_dssp             STTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHH-TSSSCGGGTTCSCCSEEEECC------
T ss_pred             cCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHH-HHHHHHHHHhcCCCCEEEECCCcCCCC
Confidence            8999999999999988 89999999999888887766778999999998876 444555556788999999999998778


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccCC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG  160 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~g  160 (162)
                      ++.+.+.++|++.+++|+.+++.+++.++|.|++++ |+||++||..+..+.++...|++||+++++|+++++.|++++|
T Consensus        90 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~g  168 (245)
T 3e9n_A           90 TIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNG  168 (245)
T ss_dssp             ----CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             chhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHHHHHHHHHHHHHHHHHhhhcC
Confidence            888899999999999999999999999999997655 8999999999999999999999999999999999999999998


Q ss_pred             CC
Q 042185          161 ID  162 (162)
Q Consensus       161 i~  162 (162)
                      ||
T Consensus       169 i~  170 (245)
T 3e9n_A          169 IR  170 (245)
T ss_dssp             CE
T ss_pred             eE
Confidence            85

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=9.7e-32  Score=199.03  Aligned_cols=161  Identities=13%  Similarity=0.087  Sum_probs=139.0

Q ss_pred             CCCCchHHHHHHHHHH-CCCeEEEEecChhhH---------------H-hhh-cCCceeEEEeccCChHHHHHHHHHHHH
Q 042185            1 CSQGGIGHALARAFAA-SDCRVVATGRSKATM---------------A-DLE-QDPRFFVQELDVLSEQSVQNVLSNVLE   62 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~-~g~~vi~~~r~~~~~---------------~-~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~   62 (162)
                      ||++|||+++|+.|++ +|++|++++|+.+..               . .+. .......+.+|++|+++++++++++.+
T Consensus        54 Gas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~~  133 (405)
T 3zu3_A           54 GASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIKQ  133 (405)
T ss_dssp             SCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             CcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            8999999999999999 999999998875432               1 111 245778899999999999999999999


Q ss_pred             HcCCccEEEECCCCC-------------CCCCC---------------------CCCChHHHHHHHHhhhhhHH-HHHHH
Q 042185           63 KFGKIDVLVNNAGVQ-------------CVGPL---------------------AEVPLSAMEQTFNTNVFGPM-RLVQA  107 (162)
Q Consensus        63 ~~~~id~vi~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~~~~~-~~~~~  107 (162)
                      ++|++|++|||||..             ...++                     .+.+.++|++++++|..+.+ .++++
T Consensus       134 ~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~~~~~~~~~  213 (405)
T 3zu3_A          134 DLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGEDWQMWIDA  213 (405)
T ss_dssp             HTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHHHHHHHH
T ss_pred             HcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchhHHHHHHHH
Confidence            999999999999974             22444                     77899999999999999998 78888


Q ss_pred             HHH-hHhhcCCCeEEEeccccccCCCCCc--hhhhHhHHHHHHHHHHHHHHhccC-CCC
Q 042185          108 VVP-HMAYRKKGKIINVGSVTVAAPGPWA--GTYTASKAALHSLTDTLRLELGHF-GID  162 (162)
Q Consensus       108 ~~~-~~~~~~~~~iv~isS~~~~~~~~~~--~~y~~sKaa~~~l~~~l~~e~~~~-gi~  162 (162)
                      +.+ .|. +++|+||++||..+..+.|..  ..|++||+++.+|+|+|+.||+++ |||
T Consensus       214 ~~~~~m~-~~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIR  271 (405)
T 3zu3_A          214 LLDAGVL-AEGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGD  271 (405)
T ss_dssp             HHHHTCE-EEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCE
T ss_pred             HHHHhhh-hCCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeE
Confidence            765 344 346899999999999988877  999999999999999999999999 986

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.98  E-value=3.3e-32  Score=199.87  Aligned_cols=160  Identities=18%  Similarity=0.227  Sum_probs=138.8

Q ss_pred             CCCC--chHHHHHHHHHHCCCeEEEEecCh---------hhHHhhhc--------CCceeEEEeccCCh--H--------
Q 042185            1 CSQG--GIGHALARAFAASDCRVVATGRSK---------ATMADLEQ--------DPRFFVQELDVLSE--Q--------   51 (162)
Q Consensus         1 Ga~~--giG~~ia~~l~~~g~~vi~~~r~~---------~~~~~~~~--------~~~~~~~~~D~~~~--~--------   51 (162)
                      ||++  |||+++|++|+++|++|++++++.         ++.+....        .....++.+|+++.  +        
T Consensus         9 Gas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~   88 (329)
T 3lt0_A            9 GIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDIDEETKN   88 (329)
T ss_dssp             CCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGGCCHHHHT
T ss_pred             CCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhhhhhhhcc
Confidence            5654  999999999999999999777654         22222111        13367888999888  7        


Q ss_pred             ----------HHHHHHHHHHHHcCCccEEEECCCCC--CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCe
Q 042185           52 ----------SVQNVLSNVLEKFGKIDVLVNNAGVQ--CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK  119 (162)
Q Consensus        52 ----------~i~~~~~~~~~~~~~id~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~  119 (162)
                                +++++++++.++++++|++|||||+.  ...++.+.+.++|++++++|+.+++.++++++|.|+++  |+
T Consensus        89 ~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~--g~  166 (329)
T 3lt0_A           89 NKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQ--SS  166 (329)
T ss_dssp             SHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EE
T ss_pred             cccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhC--Ce
Confidence                      99999999999999999999999974  35788899999999999999999999999999999765  89


Q ss_pred             EEEeccccccCCCCCch-hhhHhHHHHHHHHHHHHHHhcc-CCCC
Q 042185          120 IINVGSVTVAAPGPWAG-TYTASKAALHSLTDTLRLELGH-FGID  162 (162)
Q Consensus       120 iv~isS~~~~~~~~~~~-~y~~sKaa~~~l~~~l~~e~~~-~gi~  162 (162)
                      ||++||..+..+.+... .|++||+|+.+|+++|+.|+++ +|||
T Consensus       167 Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~  211 (329)
T 3lt0_A          167 IISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIR  211 (329)
T ss_dssp             EEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred             EEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeE
Confidence            99999999999999985 9999999999999999999998 8885

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.98  E-value=3.7e-31  Score=189.32  Aligned_cols=160  Identities=22%  Similarity=0.336  Sum_probs=144.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEec-ChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGR-SKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r-~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+||||++++++|+++|++|++++| +.+..+++..     ..++.++.+|++|+++++++++++.++++++|++||||
T Consensus        28 GasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~A  107 (274)
T 1ja9_A           28 GAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNS  107 (274)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEEEECCC
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            89999999999999999999999999 6665544322     35688999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccccc-CCCCCchhhhHhHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVA-APGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      |.....++.+.+.++|+..+++|+.+++.+++++++.|+ + +++||++||..+. .+.+....|+++|++++.|++.++
T Consensus       108 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~-~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~  185 (274)
T 1ja9_A          108 GMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR-R-GGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFA  185 (274)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE-E-EEEEEEECCGGGTCCSCCSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-h-CCEEEEEcChHhccCCCCCCchHHHHHHHHHHHHHHHH
Confidence            987777788899999999999999999999999999986 3 3899999999988 778889999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|+++.||+
T Consensus       186 ~e~~~~gi~  194 (274)
T 1ja9_A          186 VDCGAKGVT  194 (274)
T ss_dssp             HHHGGGTCE
T ss_pred             HHhhhcCeE
Confidence            999988875

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.98  E-value=6.8e-31  Score=187.48  Aligned_cols=162  Identities=23%  Similarity=0.341  Sum_probs=144.2

Q ss_pred             CCCCchHHHHHHHHHHCC---CeEEEEecChhhHHhhh----cCCceeEEEeccCChHHHHHHHHHHHHHcC--CccEEE
Q 042185            1 CSQGGIGHALARAFAASD---CRVVATGRSKATMADLE----QDPRFFVQELDVLSEQSVQNVLSNVLEKFG--KIDVLV   71 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g---~~vi~~~r~~~~~~~~~----~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--~id~vi   71 (162)
                      ||++|||++++++|+++|   ++|++++|+.+..+.+.    ...++.++.+|+++.++++.+++++.+.++  ++|++|
T Consensus        28 GasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~~~id~li  107 (267)
T 1sny_A           28 GCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLF  107 (267)
T ss_dssp             CCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEE
T ss_pred             CCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhcCCCCccEEE
Confidence            899999999999999999   99999999876443322    135789999999999999999999999998  899999


Q ss_pred             ECCCCCC-CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc------C-----CCeEEEeccccccCCCC---Cch
Q 042185           72 NNAGVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR------K-----KGKIINVGSVTVAAPGP---WAG  136 (162)
Q Consensus        72 ~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~-----~~~iv~isS~~~~~~~~---~~~  136 (162)
                      ||||... ..++.+.+.++|+..+++|+.+++.+++.++|.|+++      +     .++||++||..+..+.+   +..
T Consensus       108 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~  187 (267)
T 1sny_A          108 NNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMY  187 (267)
T ss_dssp             ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCCSCCCH
T ss_pred             ECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccCCCCCCch
Confidence            9999876 6778889999999999999999999999999999765      3     58999999998877653   677


Q ss_pred             hhhHhHHHHHHHHHHHHHHhccCCCC
Q 042185          137 TYTASKAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       137 ~y~~sKaa~~~l~~~l~~e~~~~gi~  162 (162)
                      .|+++|++++.|++.++.|++++||+
T Consensus       188 ~Y~~sK~a~~~~~~~la~e~~~~gi~  213 (267)
T 1sny_A          188 AYRTSKSALNAATKSLSVDLYPQRIM  213 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCcE
Confidence            89999999999999999999998875

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.98  E-value=6e-32  Score=201.66  Aligned_cols=162  Identities=14%  Similarity=0.120  Sum_probs=138.2

Q ss_pred             CCCCchHHHHHHHHHH-CCCeEEEEecChhhHH----------------hhh-cCCceeEEEeccCChHHHHHHHHHHHH
Q 042185            1 CSQGGIGHALARAFAA-SDCRVVATGRSKATMA----------------DLE-QDPRFFVQELDVLSEQSVQNVLSNVLE   62 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~-~g~~vi~~~r~~~~~~----------------~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~   62 (162)
                      ||++|||+++|+.|++ +|++|++++|+.+..+                .+. .......+.+|++++++++++++.+.+
T Consensus        68 GASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~~  147 (422)
T 3s8m_A           68 GASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQVIELIKT  147 (422)
T ss_dssp             SCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            8999999999999999 9999999999755322                122 245788899999999999999999999


Q ss_pred             Hc-CCccEEEECCCCC-------------CCCCC---------------------CCCChHHHHHHHHhhhhhHH-HHHH
Q 042185           63 KF-GKIDVLVNNAGVQ-------------CVGPL---------------------AEVPLSAMEQTFNTNVFGPM-RLVQ  106 (162)
Q Consensus        63 ~~-~~id~vi~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~~~~~-~~~~  106 (162)
                      ++ |++|++|||||..             ...++                     .+.+.++|++.+++|..+.+ .+++
T Consensus       148 ~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~~~~~~~~~  227 (422)
T 3s8m_A          148 EMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWELWID  227 (422)
T ss_dssp             HSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHHHHHHH
T ss_pred             HcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhchhHHHHHHH
Confidence            99 9999999999872             22344                     36899999999999999987 7888


Q ss_pred             HHHHhHhhcCCCeEEEeccccccCCCCCc--hhhhHhHHHHHHHHHHHHHHhccCCCC
Q 042185          107 AVVPHMAYRKKGKIINVGSVTVAAPGPWA--GTYTASKAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       107 ~~~~~~~~~~~~~iv~isS~~~~~~~~~~--~~y~~sKaa~~~l~~~l~~e~~~~gi~  162 (162)
                      .+.+.+..+++|+||++||..+..+.|..  ..|++||+++.+|+|+|+.|++++|||
T Consensus       228 a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIR  285 (422)
T 3s8m_A          228 ALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGG  285 (422)
T ss_dssp             HHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCE
T ss_pred             HHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEE
Confidence            87664333446899999999999888766  899999999999999999999999996

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.98  E-value=2.7e-32  Score=214.27  Aligned_cols=162  Identities=23%  Similarity=0.253  Sum_probs=131.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEec---------ChhhHHhhhcC--CceeEEEeccCChHHHHHHHHHHHHHcCCccE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGR---------SKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDV   69 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r---------~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~   69 (162)
                      ||++|||+++|++|+++|++|++++|         +.+..+++.++  .......+|+++.++++++++++.++++++|+
T Consensus        26 Gas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~iDi  105 (613)
T 3oml_A           26 GAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAIKAFGRVDI  105 (613)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC----------C
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHHHHCCCCcE
Confidence            89999999999999999999999988         44444433221  01112348999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHH
Q 042185           70 LVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLT  149 (162)
Q Consensus        70 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~  149 (162)
                      +|||||+....++.+.+.++|+.++++|+.+++.++++++|.|++++.|+||++||.++..+.++...|++||+|+.+|+
T Consensus       106 LVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~~~~Y~asKaal~~lt  185 (613)
T 3oml_A          106 LVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLA  185 (613)
T ss_dssp             EECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCChHHHHHHHHHHHHH
Confidence            99999998888899999999999999999999999999999999888899999999999999999999999999999999


Q ss_pred             HHHHHHhccCCCC
Q 042185          150 DTLRLELGHFGID  162 (162)
Q Consensus       150 ~~l~~e~~~~gi~  162 (162)
                      ++++.|++++|||
T Consensus       186 ~~la~e~~~~gI~  198 (613)
T 3oml_A          186 NTVAIEGARNNVL  198 (613)
T ss_dssp             HHHHHHHGGGTEE
T ss_pred             HHHHHHhCccCeE
Confidence            9999999999885

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.98  E-value=3.4e-31  Score=189.22  Aligned_cols=154  Identities=25%  Similarity=0.348  Sum_probs=137.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhh----c---CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLE----Q---DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~----~---~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+||||++++++|+++|++|++++|+.+..++..    +   ..++.++.+|++|+++++++++++.++++++|++|||
T Consensus        14 Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~   93 (267)
T 2gdz_A           14 GAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNN   93 (267)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            89999999999999999999999999987655432    1   2357889999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC---CCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK---KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      ||...        .++|++.+++|+.+++.+++.++|.|++++   .++||++||..+..+.+....|+++|+++++|++
T Consensus        94 Ag~~~--------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  165 (267)
T 2gdz_A           94 AGVNN--------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTR  165 (267)
T ss_dssp             CCCCC--------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCC--------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHHHHHHHHHHHH
Confidence            99742        367899999999999999999999997653   6899999999999999999999999999999999


Q ss_pred             HH--HHHhccCCCC
Q 042185          151 TL--RLELGHFGID  162 (162)
Q Consensus       151 ~l--~~e~~~~gi~  162 (162)
                      ++  +.|+++.|||
T Consensus       166 ~~ala~e~~~~gi~  179 (267)
T 2gdz_A          166 SAALAANLMNSGVR  179 (267)
T ss_dssp             HHHHHHHHHTCCEE
T ss_pred             HHHHHHHhccCCcE
Confidence            95  6889988875

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.98  E-value=3.8e-31  Score=187.37  Aligned_cols=152  Identities=22%  Similarity=0.378  Sum_probs=136.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+||||++++++|+++|++|++++|+.+..+++   ....++ +|+  .++++.+++++    .++|++|||||.....
T Consensus        26 Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~-~D~--~~~~~~~~~~~----~~iD~lv~~Ag~~~~~   95 (249)
T 1o5i_A           26 AASRGIGRAVADVLSQEGAEVTICARNEELLKRS---GHRYVV-CDL--RKDLDLLFEKV----KEVDILVLNAGGPKAG   95 (249)
T ss_dssp             SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT---CSEEEE-CCT--TTCHHHHHHHS----CCCSEEEECCCCCCCB
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhh---CCeEEE-eeH--HHHHHHHHHHh----cCCCEEEECCCCCCCC
Confidence            8999999999999999999999999998665544   356667 999  55677776665    3899999999987777


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccCC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG  160 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~g  160 (162)
                      ++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|+++++|++.++.|++++|
T Consensus        96 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g  175 (249)
T 1o5i_A           96 FFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYG  175 (249)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcC
Confidence            88899999999999999999999999999999888889999999999999999999999999999999999999999988


Q ss_pred             CC
Q 042185          161 ID  162 (162)
Q Consensus       161 i~  162 (162)
                      ||
T Consensus       176 i~  177 (249)
T 1o5i_A          176 IT  177 (249)
T ss_dssp             EE
T ss_pred             eE
Confidence            75

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.97  E-value=3e-31  Score=188.25  Aligned_cols=154  Identities=26%  Similarity=0.362  Sum_probs=136.3

Q ss_pred             CCCCchHHHHHHHHHHCCCe-EEEEecCh--hhHHhhhc---CCceeEEEeccCCh-HHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCR-VVATGRSK--ATMADLEQ---DPRFFVQELDVLSE-QSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~-vi~~~r~~--~~~~~~~~---~~~~~~~~~D~~~~-~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||++|||++++++|+++|++ |++++|+.  +.++++.+   ...+.++.+|++|+ ++++.+++++.+.++++|++|||
T Consensus        12 Gas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~   91 (254)
T 1sby_A           12 AALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILING   91 (254)
T ss_dssp             TTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcCCCCEEEEC
Confidence            89999999999999999996 99999986  33343332   34688999999998 99999999999999999999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC---CCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK---KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      ||..        +.++|+..+++|+.+++.++++++|.|.+++   .++||++||..+..+.+....|+++|+++++|++
T Consensus        92 Ag~~--------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  163 (254)
T 1sby_A           92 AGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTN  163 (254)
T ss_dssp             CCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHHHH
T ss_pred             CccC--------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHHHHHHHHHHHHHH
Confidence            9973        3567999999999999999999999997654   5899999999999999999999999999999999


Q ss_pred             HHHHHhccCCCC
Q 042185          151 TLRLELGHFGID  162 (162)
Q Consensus       151 ~l~~e~~~~gi~  162 (162)
                      +++.++++.||+
T Consensus       164 ~la~~~~~~gi~  175 (254)
T 1sby_A          164 SLAKLAPITGVT  175 (254)
T ss_dssp             HHHHHHHHHSEE
T ss_pred             HHHHHhccCCeE
Confidence            999999877764

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.97  E-value=7.7e-31  Score=182.92  Aligned_cols=137  Identities=23%  Similarity=0.297  Sum_probs=128.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC-CC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ-CV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~-~~   79 (162)
                      ||++|||+++|++|+++|++|++++|+.+               +|++|+++++++++++    +++|++|||||.. ..
T Consensus        13 Gas~gIG~~~a~~l~~~G~~V~~~~r~~~---------------~D~~~~~~v~~~~~~~----g~id~lv~nAg~~~~~   73 (223)
T 3uce_A           13 GGTSGIGAELAKQLESEHTIVHVASRQTG---------------LDISDEKSVYHYFETI----GAFDHLIVTAGSYAPA   73 (223)
T ss_dssp             TTTSHHHHHHHHHHCSTTEEEEEESGGGT---------------CCTTCHHHHHHHHHHH----CSEEEEEECCCCCCCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEecCCcc---------------cCCCCHHHHHHHHHHh----CCCCEEEECCCCCCCC
Confidence            89999999999999999999999999865               8999999999988765    8999999999987 56


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      .++.+.+.++|++.+++|+.+++.++++++|.|++  +|+||++||..+..+.++...|+++|+++++|+++++.|+++
T Consensus        74 ~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~  150 (223)
T 3uce_A           74 GKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ--GGSITLTSGMLSRKVVANTYVKAAINAAIEATTKVLAKELAP  150 (223)
T ss_dssp             SCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC--CeEEEEecchhhccCCCCchHHHHHHHHHHHHHHHHHHhhcC
Confidence            78899999999999999999999999999999854  489999999999999999999999999999999999999986

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.97  E-value=1.8e-30  Score=182.63  Aligned_cols=154  Identities=23%  Similarity=0.280  Sum_probs=137.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+||||++++++|+++|++|++++|+.+ .      ..+.++.+|++|+++++++++++ +.++++|++|||||.....
T Consensus         9 GasggiG~~la~~l~~~G~~V~~~~r~~~-~------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d~li~~ag~~~~~   80 (242)
T 1uay_A            9 GGASGLGRAAALALKARGYRVVVLDLRRE-G------EDLIYVEGDVTREEDVRRAVARA-QEEAPLFAVVSAAGVGLAE   80 (242)
T ss_dssp             TTTSHHHHHHHHHHHHHTCEEEEEESSCC-S------SSSEEEECCTTCHHHHHHHHHHH-HHHSCEEEEEECCCCCCCC
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEccCcc-c------cceEEEeCCCCCHHHHHHHHHHH-HhhCCceEEEEcccccCcc
Confidence            89999999999999999999999999875 2      23588999999999999999999 8889999999999987666


Q ss_pred             CCCCCCh----HHHHHHHHhhhhhHHHHHHHHHHhHhhcC---C---CeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           81 PLAEVPL----SAMEQTFNTNVFGPMRLVQAVVPHMAYRK---K---GKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        81 ~~~~~~~----~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~---~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      ++.+.+.    ++|++.+++|+.+++.+++++.+.|++++   .   ++||++||..+..+.++...|+++|++++.|++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~  160 (242)
T 1uay_A           81 KILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTL  160 (242)
T ss_dssp             CSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHH
T ss_pred             cccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCchhhHHHHHHHHHHH
Confidence            5555444    49999999999999999999999997654   3   499999999999998999999999999999999


Q ss_pred             HHHHHhccCCCC
Q 042185          151 TLRLELGHFGID  162 (162)
Q Consensus       151 ~l~~e~~~~gi~  162 (162)
                      .++.|++++||+
T Consensus       161 ~l~~e~~~~gi~  172 (242)
T 1uay_A          161 PAARELAGWGIR  172 (242)
T ss_dssp             HHHHHHGGGTEE
T ss_pred             HHHHHHhhcCcE
Confidence            999999988874

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.97  E-value=1.6e-30  Score=187.84  Aligned_cols=150  Identities=25%  Similarity=0.306  Sum_probs=133.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC--CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||++++++|+++|++|++++|+.+..+++.++  .++.++.+|++|.++++++++++    +++|++|||||+..
T Consensus        23 Gas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~----~~iD~lv~nAg~~~   98 (291)
T 3rd5_A           23 GANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV----SGADVLINNAGIMA   98 (291)
T ss_dssp             CCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC----CCEEEEEECCCCCS
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc----CCCCEEEECCcCCC
Confidence            8999999999999999999999999999888877654  47889999999999999988776    79999999999853


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC-------------CCCchhhhHhHHHH
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP-------------GPWAGTYTASKAAL  145 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-------------~~~~~~y~~sKaa~  145 (162)
                        +..+.+.++|+..+++|+.+++.++++++|.|.+    +||++||..+..+             .++...|++||+++
T Consensus        99 --~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~  172 (291)
T 3rd5_A           99 --VPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLAN  172 (291)
T ss_dssp             --CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHHH
T ss_pred             --CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhccCCCCcccccccccCCCCcchHHHHHHHH
Confidence              3356788999999999999999999999999853    8999999987754             35567899999999


Q ss_pred             HHHHHHHHHHhccCC
Q 042185          146 HSLTDTLRLELGHFG  160 (162)
Q Consensus       146 ~~l~~~l~~e~~~~g  160 (162)
                      +.|++.++.|++++|
T Consensus       173 ~~~~~~la~e~~~~g  187 (291)
T 3rd5_A          173 LLFTSELQRRLTAAG  187 (291)
T ss_dssp             HHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhhCC
Confidence            999999999999887

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.97  E-value=6.4e-30  Score=186.65  Aligned_cols=160  Identities=24%  Similarity=0.307  Sum_probs=132.3

Q ss_pred             CC--CCchHHHHHHHHHHCCCeEEEEecChh-----------hHHhhhc---CC---ceeEEEe------------ccCC
Q 042185            1 CS--QGGIGHALARAFAASDCRVVATGRSKA-----------TMADLEQ---DP---RFFVQEL------------DVLS   49 (162)
Q Consensus         1 Ga--~~giG~~ia~~l~~~g~~vi~~~r~~~-----------~~~~~~~---~~---~~~~~~~------------D~~~   49 (162)
                      ||  ++|||+++|++|+++|++|++++|++.           .+++..+   ..   ...++.+            |++|
T Consensus        16 Ga~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~Dv~~   95 (315)
T 2o2s_A           16 GVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPEDVPQDIKD   95 (315)
T ss_dssp             CCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSSTTSSCHHHHT
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccccchhhhhhhc
Confidence            55  899999999999999999999987531           1122211   11   0234444            3443


Q ss_pred             --------hHHHHHHHHHHHHHcCCccEEEECCCCCC--CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCe
Q 042185           50 --------EQSVQNVLSNVLEKFGKIDVLVNNAGVQC--VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK  119 (162)
Q Consensus        50 --------~~~i~~~~~~~~~~~~~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~  119 (162)
                              +++++.+++++.+++|++|++|||||...  ..++.+.+.++|++.+++|+.+++.++++++|.|++  +|+
T Consensus        96 ~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~  173 (315)
T 2o2s_A           96 NKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNE--GGS  173 (315)
T ss_dssp             CGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEE--EEE
T ss_pred             ccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhc--CCE
Confidence                    66899999999999999999999999753  567888999999999999999999999999999965  389


Q ss_pred             EEEeccccccCCCCCc-hhhhHhHHHHHHHHHHHHHHhcc-CCCC
Q 042185          120 IINVGSVTVAAPGPWA-GTYTASKAALHSLTDTLRLELGH-FGID  162 (162)
Q Consensus       120 iv~isS~~~~~~~~~~-~~y~~sKaa~~~l~~~l~~e~~~-~gi~  162 (162)
                      ||++||..+..+.+.. ..|+++|+++.+|+++++.|+++ +|||
T Consensus       174 Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIr  218 (315)
T 2o2s_A          174 AVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVR  218 (315)
T ss_dssp             EEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCE
T ss_pred             EEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeE
Confidence            9999999999888887 58999999999999999999985 8885

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.97  E-value=1.9e-29  Score=182.77  Aligned_cols=160  Identities=25%  Similarity=0.287  Sum_probs=131.4

Q ss_pred             CCC--CchHHHHHHHHHHCCCeEEEEecCh-----------hhHHhhhc--CC----ceeEEEec--------c----CC
Q 042185            1 CSQ--GGIGHALARAFAASDCRVVATGRSK-----------ATMADLEQ--DP----RFFVQELD--------V----LS   49 (162)
Q Consensus         1 Ga~--~giG~~ia~~l~~~g~~vi~~~r~~-----------~~~~~~~~--~~----~~~~~~~D--------~----~~   49 (162)
                      ||+  +|||+++|++|+++|++|++++|+.           +.++++.+  ..    ....+.+|        +    +|
T Consensus        15 Gas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~Dv~~   94 (297)
T 1d7o_A           15 GIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPEDVPEDVKA   94 (297)
T ss_dssp             CCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGGSCHHHHT
T ss_pred             CCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccchhhhhhhhhc
Confidence            777  9999999999999999999998753           11222211  00    02333333        2    22


Q ss_pred             --------hHHHHHHHHHHHHHcCCccEEEECCCCCC--CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCe
Q 042185           50 --------EQSVQNVLSNVLEKFGKIDVLVNNAGVQC--VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK  119 (162)
Q Consensus        50 --------~~~i~~~~~~~~~~~~~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~  119 (162)
                              +++++.+++++.++++++|++|||||+..  ..++.+.+.++|++.+++|+.+++.++++++|.|++  +|+
T Consensus        95 ~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~  172 (297)
T 1d7o_A           95 NKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNP--GGA  172 (297)
T ss_dssp             SHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEE
T ss_pred             cccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhcc--Cce
Confidence                    66899999999999999999999999753  567788999999999999999999999999999964  489


Q ss_pred             EEEeccccccCCCCCc-hhhhHhHHHHHHHHHHHHHHhcc-CCCC
Q 042185          120 IINVGSVTVAAPGPWA-GTYTASKAALHSLTDTLRLELGH-FGID  162 (162)
Q Consensus       120 iv~isS~~~~~~~~~~-~~y~~sKaa~~~l~~~l~~e~~~-~gi~  162 (162)
                      ||++||..+..+.+.. ..|+++|+++++|+++++.|+++ +|||
T Consensus       173 iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~  217 (297)
T 1d7o_A          173 SISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIR  217 (297)
T ss_dssp             EEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred             EEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcE
Confidence            9999999999888887 69999999999999999999985 7875

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.97  E-value=2.5e-29  Score=188.53  Aligned_cols=162  Identities=15%  Similarity=0.214  Sum_probs=138.0

Q ss_pred             CCCCchHHH--HHHHHHHCCCeEEEEecChhh---------------HHhh-h-cCCceeEEEeccCChHHHHHHHHHHH
Q 042185            1 CSQGGIGHA--LARAFAASDCRVVATGRSKAT---------------MADL-E-QDPRFFVQELDVLSEQSVQNVLSNVL   61 (162)
Q Consensus         1 Ga~~giG~~--ia~~l~~~g~~vi~~~r~~~~---------------~~~~-~-~~~~~~~~~~D~~~~~~i~~~~~~~~   61 (162)
                      ||++|||++  +++.|+++|++|++++|+.+.               +++. . ....+..+.+|+++.++++++++++.
T Consensus        67 GassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~~~v~~i~  146 (418)
T 4eue_A           67 GASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKDKVIKYIK  146 (418)
T ss_dssp             SCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHH
Confidence            899999999  999999999999999986432               2222 1 23568899999999999999999999


Q ss_pred             HHcCCccEEEECCCCC-------------CCCCC---------------------CCCChHHHHHHHHhhhhhHH-HHHH
Q 042185           62 EKFGKIDVLVNNAGVQ-------------CVGPL---------------------AEVPLSAMEQTFNTNVFGPM-RLVQ  106 (162)
Q Consensus        62 ~~~~~id~vi~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~~~~~-~~~~  106 (162)
                      +++|++|++|||||..             ...++                     .+.+.++|+..+++|..+.+ .+++
T Consensus       147 ~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~~~~~~~~~  226 (418)
T 4eue_A          147 DEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGGEDWQEWCE  226 (418)
T ss_dssp             HTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSSHHHHHHHH
T ss_pred             HHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhHHHHHHHHH
Confidence            9999999999999974             22333                     45799999999999999988 7888


Q ss_pred             HHHHhHhhcCCCeEEEeccccccCCCCCc--hhhhHhHHHHHHHHHHHHHHhcc-CCCC
Q 042185          107 AVVPHMAYRKKGKIINVGSVTVAAPGPWA--GTYTASKAALHSLTDTLRLELGH-FGID  162 (162)
Q Consensus       107 ~~~~~~~~~~~~~iv~isS~~~~~~~~~~--~~y~~sKaa~~~l~~~l~~e~~~-~gi~  162 (162)
                      .+.+.+...++|+||++||..+..+.|.+  ..|++||+|+.+|+++|+.|+++ +|||
T Consensus       227 ~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIr  285 (418)
T 4eue_A          227 ELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGR  285 (418)
T ss_dssp             HHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCE
T ss_pred             HHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeE
Confidence            87765444457899999999999988888  99999999999999999999999 8986

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.96  E-value=4.9e-30  Score=187.54  Aligned_cols=160  Identities=23%  Similarity=0.303  Sum_probs=114.6

Q ss_pred             CC--CCchHHHHHHHHHHCCCeEEEEecCh-----------hhHHh-----------hhcC----C----ceeEEEec--
Q 042185            1 CS--QGGIGHALARAFAASDCRVVATGRSK-----------ATMAD-----------LEQD----P----RFFVQELD--   46 (162)
Q Consensus         1 Ga--~~giG~~ia~~l~~~g~~vi~~~r~~-----------~~~~~-----------~~~~----~----~~~~~~~D--   46 (162)
                      ||  ++|||+++|++|+++|++|++++|++           +.+++           +.++    .    ...++.+|  
T Consensus        16 Ga~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~   95 (319)
T 2ptg_A           16 GVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFDKIYPLDAV   95 (319)
T ss_dssp             CCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCSEEEECCTT
T ss_pred             CCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccccccccccccc
Confidence            55  89999999999999999999998753           11111           1110    0    02344433  


Q ss_pred             ----------cCC--------hHHHHHHHHHHHHHcCCccEEEECCCCCC--CCCCCCCChHHHHHHHHhhhhhHHHHHH
Q 042185           47 ----------VLS--------EQSVQNVLSNVLEKFGKIDVLVNNAGVQC--VGPLAEVPLSAMEQTFNTNVFGPMRLVQ  106 (162)
Q Consensus        47 ----------~~~--------~~~i~~~~~~~~~~~~~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~  106 (162)
                                +++        +++++.+++++.++++++|++|||||+..  ..++.+.+.++|++.+++|+.+++.+++
T Consensus        96 ~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  175 (319)
T 2ptg_A           96 FDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQ  175 (319)
T ss_dssp             CCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHHH
Confidence                      333        45899999999999999999999999753  5678889999999999999999999999


Q ss_pred             HHHHhHhhcCCCeEEEeccccccCCCCCc-hhhhHhHHHHHHHHHHHHHHhcc-CCCC
Q 042185          107 AVVPHMAYRKKGKIINVGSVTVAAPGPWA-GTYTASKAALHSLTDTLRLELGH-FGID  162 (162)
Q Consensus       107 ~~~~~~~~~~~~~iv~isS~~~~~~~~~~-~~y~~sKaa~~~l~~~l~~e~~~-~gi~  162 (162)
                      +++|.|++  .|+||++||..+..+.+.. ..|+++|+++.+|+++++.|+++ +|||
T Consensus       176 ~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIr  231 (319)
T 2ptg_A          176 HFLPLMKE--GGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVR  231 (319)
T ss_dssp             HHGGGEEE--EEEEEEEEECC------------------THHHHHHHHHHHHHHHCCE
T ss_pred             HHHHHHhc--CceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCee
Confidence            99999965  3899999999999888887 68999999999999999999985 8885

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.96  E-value=3.7e-29  Score=178.77  Aligned_cols=158  Identities=26%  Similarity=0.343  Sum_probs=134.9

Q ss_pred             CCCCchHHHHHHHHHH-CCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAA-SDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~-~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+||||++++++|++ +|++|++++|+.+..++..+     ..++.++.+|++|.++++.+++++.+.++++|++||||
T Consensus        11 GasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~A   90 (276)
T 1wma_A           11 GGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNA   90 (276)
T ss_dssp             SCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECC
T ss_pred             CCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            8999999999999999 99999999999776554422     35688999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCC-hHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC----------------------
Q 042185           75 GVQCVGPLAEVP-LSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP----------------------  131 (162)
Q Consensus        75 g~~~~~~~~~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----------------------  131 (162)
                      |...... ...+ .++|+..+++|+.+++.+++.++|.|++  .++||++||..+..+                      
T Consensus        91 g~~~~~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e~~~  167 (276)
T 1wma_A           91 GIAFKVA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEEL  167 (276)
T ss_dssp             CCCCCTT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHH
T ss_pred             cccccCC-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCC--CCEEEEECChhhhcccccCChhHHhhccccccchhhh
Confidence            9865433 2334 5899999999999999999999998854  479999999876532                      


Q ss_pred             --------------------CCCchhhhHhHHHHHHHHHHHHHHhcc----CCCC
Q 042185          132 --------------------GPWAGTYTASKAALHSLTDTLRLELGH----FGID  162 (162)
Q Consensus       132 --------------------~~~~~~y~~sKaa~~~l~~~l~~e~~~----~gi~  162 (162)
                                          .| ...|+++|++++.|++.++.++++    .|||
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~  221 (276)
T 1wma_A          168 VGLMNKFVEDTKKGVHQKEGWP-SSAYGVTKIGVTVLSRIHARKLSEQRKGDKIL  221 (276)
T ss_dssp             HHHHHHHHHHHHTTCTTTTTCC-SCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCE
T ss_pred             hhhhhhhhhhhcccccccCCCc-cchhHHHHHHHHHHHHHHHHHhhcccCCCceE
Confidence                                12 378999999999999999999987    6774

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.96  E-value=2.5e-29  Score=173.09  Aligned_cols=152  Identities=22%  Similarity=0.348  Sum_probs=132.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+||||++++++|+++  +|++++|+.+..+++.++....++.+|++|+++++.++++    ++++|++|||||.....
T Consensus         7 Gasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~~~id~vi~~ag~~~~~   80 (207)
T 2yut_A            7 GATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGARALPADLADELEAKALLEE----AGPLDLLVHAVGKAGRA   80 (207)
T ss_dssp             TTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHH----HCSEEEEEECCCCCCCB
T ss_pred             cCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHh----cCCCCEEEECCCcCCCC
Confidence            89999999999999998  9999999988776654322228889999999999998887    68999999999988777


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccCC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG  160 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~g  160 (162)
                      ++.+.+.++|+..+++|+.+++.+++++    ++++.++||++||..++.+.++...|+++|++++.|++.++.|+++.|
T Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~g  156 (207)
T 2yut_A           81 SVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREG  156 (207)
T ss_dssp             CSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             ChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhC
Confidence            8888899999999999999999999997    334568999999999999999999999999999999999999999888


Q ss_pred             CC
Q 042185          161 ID  162 (162)
Q Consensus       161 i~  162 (162)
                      |+
T Consensus       157 i~  158 (207)
T 2yut_A          157 VH  158 (207)
T ss_dssp             CE
T ss_pred             CE
Confidence            75

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.96  E-value=1e-28  Score=169.52  Aligned_cols=142  Identities=20%  Similarity=0.352  Sum_probs=129.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|+||++++++|+ +|++|++++|+.+            ++.+|++++++++++++++    +++|++|||||.....
T Consensus        10 Gasg~iG~~~~~~l~-~g~~V~~~~r~~~------------~~~~D~~~~~~~~~~~~~~----~~~d~vi~~ag~~~~~   72 (202)
T 3d7l_A           10 GASGTLGSAVKERLE-KKAEVITAGRHSG------------DVTVDITNIDSIKKMYEQV----GKVDAIVSATGSATFS   72 (202)
T ss_dssp             TTTSHHHHHHHHHHT-TTSEEEEEESSSS------------SEECCTTCHHHHHHHHHHH----CCEEEEEECCCCCCCC
T ss_pred             cCCcHHHHHHHHHHH-CCCeEEEEecCcc------------ceeeecCCHHHHHHHHHHh----CCCCEEEECCCCCCCC
Confidence            899999999999999 9999999999864            4789999999999998775    7999999999987777


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccCC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG  160 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~g  160 (162)
                      ++.+.+.++|+..+++|+.+++.+++.+.+.|++  +++||++||..+..+.++...|+++|++++.+++.++.|+ +.|
T Consensus        73 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~~~~e~-~~g  149 (202)
T 3d7l_A           73 PLTELTPEKNAVTISSKLGGQINLVLLGIDSLND--KGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEM-PRG  149 (202)
T ss_dssp             CGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHTTSC-STT
T ss_pred             ChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc--CCEEEEEcchhhcCCCCccHHHHHHHHHHHHHHHHHHHHc-cCC
Confidence            7888999999999999999999999999998854  3899999999999999999999999999999999999998 777


Q ss_pred             CC
Q 042185          161 ID  162 (162)
Q Consensus       161 i~  162 (162)
                      |+
T Consensus       150 i~  151 (202)
T 3d7l_A          150 IR  151 (202)
T ss_dssp             CE
T ss_pred             eE
Confidence            74

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.96  E-value=1.7e-29  Score=179.27  Aligned_cols=144  Identities=22%  Similarity=0.246  Sum_probs=124.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||++|||++++++|+++|++|++++|+.+..+.       . +.+|+++.++++++++++   .+++|++|||||.....
T Consensus         8 Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------~-~~~Dl~~~~~v~~~~~~~---~~~id~lv~~Ag~~~~~   76 (257)
T 1fjh_A            8 GCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------D-LSTAEGRKQAIADVLAKC---SKGMDGLVLCAGLGPQT   76 (257)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------C-TTSHHHHHHHHHHHHTTC---TTCCSEEEECCCCCTTC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------c-cccCCCCHHHHHHHHHHh---CCCCCEEEECCCCCCCc
Confidence            899999999999999999999999998765332       1 678999999988887643   38999999999975411


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccccc----------------------------CCC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVA----------------------------APG  132 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~----------------------------~~~  132 (162)
                             +.|+..+++|+.+++.++++++|.|++++.++||++||..+.                            .+.
T Consensus        77 -------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (257)
T 1fjh_A           77 -------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQ  149 (257)
T ss_dssp             -------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTT
T ss_pred             -------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCC
Confidence                   238999999999999999999999988778999999999887                            444


Q ss_pred             CCchhhhHhHHHHHHHHHHHHHHhccCCCC
Q 042185          133 PWAGTYTASKAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       133 ~~~~~y~~sKaa~~~l~~~l~~e~~~~gi~  162 (162)
                      ++...|++||++++.|++.++.|++++|||
T Consensus       150 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~  179 (257)
T 1fjh_A          150 GGNLAYAGSKNALTVAVRKRAAAWGEAGVR  179 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTHHHHHHTTCE
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHhhcCeE
Confidence            577899999999999999999999998885

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.96  E-value=4.2e-28  Score=187.39  Aligned_cols=157  Identities=17%  Similarity=0.141  Sum_probs=134.7

Q ss_pred             CCCCchHHHHHHHHHHCCCe-EEEE-ecCh-------------hhHHhhh-----cCCceeEEEeccCChHHHHHHHHHH
Q 042185            1 CSQGGIGHALARAFAASDCR-VVAT-GRSK-------------ATMADLE-----QDPRFFVQELDVLSEQSVQNVLSNV   60 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~-vi~~-~r~~-------------~~~~~~~-----~~~~~~~~~~D~~~~~~i~~~~~~~   60 (162)
                      ||+||||.++|++|+++|++ |+++ +|+.             +..+++.     ...++.++.||++|.++++.+++++
T Consensus       258 GgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i  337 (525)
T 3qp9_A          258 GAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEAAARLLAGV  337 (525)
T ss_dssp             STTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHTS
T ss_pred             CCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHHHHHHHHHH
Confidence            89999999999999999996 7788 8883             2222221     1467899999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhh
Q 042185           61 LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYT  139 (162)
Q Consensus        61 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~  139 (162)
                      . +++++|+||||||+...+++.+.+.++|+.++++|+.+++.+.+.+.+.+++++ .++||++||.++..+.+++..|+
T Consensus       338 ~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~~g~~~Ya  416 (525)
T 3qp9_A          338 S-DAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGGAGQGAYA  416 (525)
T ss_dssp             C-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCCTTCHHHH
T ss_pred             H-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCCCCCHHHH
Confidence            8 789999999999998888999999999999999999999999999999987665 78999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhccCCCC
Q 042185          140 ASKAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       140 ~sKaa~~~l~~~l~~e~~~~gi~  162 (162)
                      ++|+++++|+    .+++..||+
T Consensus       417 aaKa~l~~lA----~~~~~~gi~  435 (525)
T 3qp9_A          417 AGTAFLDALA----GQHRADGPT  435 (525)
T ss_dssp             HHHHHHHHHH----TSCCSSCCE
T ss_pred             HHHHHHHHHH----HHHHhCCCC
Confidence            9999999874    566666663

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.94  E-value=2.7e-26  Score=175.87  Aligned_cols=148  Identities=22%  Similarity=0.303  Sum_probs=129.3

Q ss_pred             CCCCchHHHHHHHHHHCCC-eEEEEecChhh---HHh----hh-cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEE
Q 042185            1 CSQGGIGHALARAFAASDC-RVVATGRSKAT---MAD----LE-QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLV   71 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-~vi~~~r~~~~---~~~----~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi   71 (162)
                      ||+||||++++++|+++|+ +|++++|+...   .++    +. ...++.++.||++|.++++.+++++.+. +++|++|
T Consensus       246 GgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-g~ld~vV  324 (496)
T 3mje_A          246 GGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED-APLTAVF  324 (496)
T ss_dssp             TCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-SCEEEEE
T ss_pred             CCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-CCCeEEE
Confidence            8999999999999999999 89999997432   222    22 2467899999999999999999998776 7999999


Q ss_pred             ECCCCC-CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           72 NNAGVQ-CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        72 ~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      ||||+. ...++.+.+.++|+.++++|+.+++.+.+.+.+    ...++||++||..+..+.+++..|+++|+++++|++
T Consensus       325 h~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~----~~~~~iV~~SS~a~~~g~~g~~~YaAaKa~ldala~  400 (496)
T 3mje_A          325 HSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTAD----LDLDAFVLFSSGAAVWGSGGQPGYAAANAYLDALAE  400 (496)
T ss_dssp             ECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTT----SCCSEEEEEEEHHHHTTCTTCHHHHHHHHHHHHHHH
T ss_pred             ECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhc----cCCCEEEEEeChHhcCCCCCcHHHHHHHHHHHHHHH
Confidence            999987 678899999999999999999999999988755    345799999999999999999999999999999887


Q ss_pred             HHH
Q 042185          151 TLR  153 (162)
Q Consensus       151 ~l~  153 (162)
                      .++
T Consensus       401 ~~~  403 (496)
T 3mje_A          401 HRR  403 (496)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            554

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.94  E-value=3.5e-27  Score=194.62  Aligned_cols=157  Identities=18%  Similarity=0.249  Sum_probs=136.0

Q ss_pred             CCCCc-hHHHHHHHHHHCCCeEEEE-ecChhhHHh----hhc-----CCceeEEEeccCChHHHHHHHHHHHHH-----c
Q 042185            1 CSQGG-IGHALARAFAASDCRVVAT-GRSKATMAD----LEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEK-----F   64 (162)
Q Consensus         1 Ga~~g-iG~~ia~~l~~~g~~vi~~-~r~~~~~~~----~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~-----~   64 (162)
                      ||++| ||+++|++|+++|++|+++ +|+.+.+++    +..     ..++.++.+|++|.++++++++++.+.     +
T Consensus       483 GASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e~~~~~Gf  562 (1688)
T 2pff_A          483 GAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNGGL  562 (1688)
T ss_dssp             SCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHSCTTSSSC
T ss_pred             CCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHHhcccccc
Confidence            78998 9999999999999999988 576554432    211     246789999999999999999999988     7


Q ss_pred             C-CccEEEECCCCCCCC-CCCCCC--hHHHHHHHHhhhhhHHHHHHHH--HHhHhhcCCCeEEEeccccccCCCCCchhh
Q 042185           65 G-KIDVLVNNAGVQCVG-PLAEVP--LSAMEQTFNTNVFGPMRLVQAV--VPHMAYRKKGKIINVGSVTVAAPGPWAGTY  138 (162)
Q Consensus        65 ~-~id~vi~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~~~~~~--~~~~~~~~~~~iv~isS~~~~~~~~~~~~y  138 (162)
                      | ++|++|||||+.... ++.+.+  .++|++++++|+.+++.+++.+  .|.|++++.|+||++||..+..+  +...|
T Consensus       563 G~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G--g~saY  640 (1688)
T 2pff_A          563 GWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG--GDGMY  640 (1688)
T ss_dssp             CCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS--CBTTH
T ss_pred             CCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC--CchHH
Confidence            7 999999999987766 788888  9999999999999999999998  78887776789999999988876  67899


Q ss_pred             hHhHHHHHHH-HHHHHHHhccC
Q 042185          139 TASKAALHSL-TDTLRLELGHF  159 (162)
Q Consensus       139 ~~sKaa~~~l-~~~l~~e~~~~  159 (162)
                      ++||+|+++| .+.++.++++.
T Consensus       641 aASKAAL~aLttrsLAeEla~~  662 (1688)
T 2pff_A          641 SESKLSLETLFNRWHSESWANQ  662 (1688)
T ss_dssp             HHHHHHHTHHHHHTTTSSCTTT
T ss_pred             HHHHHHHHHHHHHHHHHHcCCC
Confidence            9999999999 78888888764

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.94  E-value=2e-26  Score=194.44  Aligned_cols=159  Identities=18%  Similarity=0.246  Sum_probs=138.3

Q ss_pred             CCCCc-hHHHHHHHHHHCCCeEEEE-ecChhhHHhhh----c-----CCceeEEEeccCChHHHHHHHHHHHHH-----c
Q 042185            1 CSQGG-IGHALARAFAASDCRVVAT-GRSKATMADLE----Q-----DPRFFVQELDVLSEQSVQNVLSNVLEK-----F   64 (162)
Q Consensus         1 Ga~~g-iG~~ia~~l~~~g~~vi~~-~r~~~~~~~~~----~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~-----~   64 (162)
                      ||++| ||+++|+.|+++|++|+++ +|+.+..++..    .     ...+.++.+|++|.++++.+++++.+.     +
T Consensus       682 GASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~~~~~~G~  761 (1887)
T 2uv8_A          682 GAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNGGL  761 (1887)
T ss_dssp             SCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHSCTTTTSC
T ss_pred             CCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHHhcccccc
Confidence            78998 9999999999999999998 57765543321    1     356889999999999999999999988     6


Q ss_pred             C-CccEEEECCCCCCCC-CCCCCC--hHHHHHHHHhhhhhHHHHHHHH--HHhHhhcCCCeEEEeccccccCCCCCchhh
Q 042185           65 G-KIDVLVNNAGVQCVG-PLAEVP--LSAMEQTFNTNVFGPMRLVQAV--VPHMAYRKKGKIINVGSVTVAAPGPWAGTY  138 (162)
Q Consensus        65 ~-~id~vi~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~~~~~~--~~~~~~~~~~~iv~isS~~~~~~~~~~~~y  138 (162)
                      | ++|++|||||+.... ++.+.+  .++|++++++|+.+++.+++.+  .|.|.+++.|+||++||..+..+  +...|
T Consensus       762 G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g--g~~aY  839 (1887)
T 2uv8_A          762 GWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG--GDGMY  839 (1887)
T ss_dssp             CCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSS--CBTTH
T ss_pred             CCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccC--CCchH
Confidence            6 999999999987766 788888  8999999999999999999988  78887666789999999988876  67889


Q ss_pred             hHhHHHHHHH-HHHHHHHhccCCCC
Q 042185          139 TASKAALHSL-TDTLRLELGHFGID  162 (162)
Q Consensus       139 ~~sKaa~~~l-~~~l~~e~~~~gi~  162 (162)
                      ++||+++++| ++.++.++++. ||
T Consensus       840 aASKAAL~~Lttr~lA~ela~~-Ir  863 (1887)
T 2uv8_A          840 SESKLSLETLFNRWHSESWANQ-LT  863 (1887)
T ss_dssp             HHHHHHGGGHHHHHHHSSCTTT-EE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCC-eE
Confidence            9999999999 99999998875 53

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.94  E-value=1.3e-26  Score=186.34  Aligned_cols=151  Identities=21%  Similarity=0.334  Sum_probs=132.3

Q ss_pred             CCCCchHHHHHHHHH-HCCC-eEEEEecChhh---HHh----hh-cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEE
Q 042185            1 CSQGGIGHALARAFA-ASDC-RVVATGRSKAT---MAD----LE-QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVL   70 (162)
Q Consensus         1 Ga~~giG~~ia~~l~-~~g~-~vi~~~r~~~~---~~~----~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~v   70 (162)
                      ||++|||+++|++|+ ++|+ +|++++|+.+.   .++    +. ...++.++.||++|.++++++++++.+.+ +||++
T Consensus       537 Gg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~~-~id~l  615 (795)
T 3slk_A          537 GGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDEH-PLTAV  615 (795)
T ss_dssp             TTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS-CEEEE
T ss_pred             cCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC-CCEEE
Confidence            899999999999999 7999 69999998432   222    22 24678999999999999999999998776 99999


Q ss_pred             EECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           71 VNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      |||||+....++.+++.++|++.+++|+.+++++.+++.|.|      +||++||.++..+.+++..|+++|+    |++
T Consensus       616 VnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~ag~~g~~g~~~YaAaka----~~~  685 (795)
T 3slk_A          616 VHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVLGSGGQGNYAAANS----FLD  685 (795)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEETHHHHTCSSCHHHHHHHH----HHH
T ss_pred             EECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccHHhcCCCCCCHHHHHHHH----HHH
Confidence            999999888899999999999999999999999999997766      8999999999999999999999996    556


Q ss_pred             HHHHHhccCCCC
Q 042185          151 TLRLELGHFGID  162 (162)
Q Consensus       151 ~l~~e~~~~gi~  162 (162)
                      +|+.+++++||+
T Consensus       686 alA~~~~~~Gi~  697 (795)
T 3slk_A          686 ALAQQRQSRGLP  697 (795)
T ss_dssp             HHHHHHHHTTCC
T ss_pred             HHHHHHHHcCCe
Confidence            666677777775

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.93  E-value=4.7e-26  Score=161.01  Aligned_cols=144  Identities=25%  Similarity=0.298  Sum_probs=123.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|+||++++++|+++|++|++++|+.+..+.        .+.+|+++.++++.+++++   .+++|++|||||.... 
T Consensus         8 Gasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~~~D~~~~~~~~~~~~~~---~~~~d~vi~~Ag~~~~-   75 (255)
T 2dkn_A            8 GSASGIGAALKELLARAGHTVIGIDRGQADIEA--------DLSTPGGRETAVAAVLDRC---GGVLDGLVCCAGVGVT-   75 (255)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------CTTSHHHHHHHHHHHHHHH---TTCCSEEEECCCCCTT-
T ss_pred             CCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc--------cccCCcccHHHHHHHHHHc---CCCccEEEECCCCCCc-
Confidence            899999999999999999999999998764321        1678999999988888754   3799999999997531 


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC--------------------------CC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG--------------------------PW  134 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~--------------------------~~  134 (162)
                            .+.|+..+++|+.+++.+++.+.+.|++.+.++||++||..++.+.                          ++
T Consensus        76 ------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (255)
T 2dkn_A           76 ------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQT  149 (255)
T ss_dssp             ------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCH
T ss_pred             ------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCc
Confidence                  1348899999999999999999999987777899999999887664                          56


Q ss_pred             chhhhHhHHHHHHHHHHHHHHhccCCCC
Q 042185          135 AGTYTASKAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       135 ~~~y~~sKaa~~~l~~~l~~e~~~~gi~  162 (162)
                      ...|+.+|++++.+++.++.++++.||+
T Consensus       150 ~~~Y~~sK~a~~~~~~~~~~~~~~~gi~  177 (255)
T 2dkn_A          150 HLAYAGSKYAVTCLARRNVVDWAGRGVR  177 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHTHHHHHHTTCE
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhcCcE
Confidence            6789999999999999999999888874

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.93  E-value=1.5e-25  Score=188.91  Aligned_cols=157  Identities=18%  Similarity=0.276  Sum_probs=133.5

Q ss_pred             CCCCc-hHHHHHHHHHHCCCeEEEEe-cChhhHHh----hhc-----CCceeEEEeccCChHHHHHHHHHHHHH---cC-
Q 042185            1 CSQGG-IGHALARAFAASDCRVVATG-RSKATMAD----LEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEK---FG-   65 (162)
Q Consensus         1 Ga~~g-iG~~ia~~l~~~g~~vi~~~-r~~~~~~~----~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~---~~-   65 (162)
                      ||++| ||+++|++|+++|++|++++ |+.+.+++    +..     ...+.++.||++|.++++.+++++.+.   +| 
T Consensus       659 GASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~~~~~~G~  738 (1878)
T 2uv9_A          659 GAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIYDTKNGLGW  738 (1878)
T ss_dssp             SCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHCSSSSCCC
T ss_pred             CCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHhhcccCC
Confidence            78998 99999999999999999985 65544332    211     356889999999999999999999998   88 


Q ss_pred             CccEEEECCCCCCCC-CCCCCC--hHHHHHHHHhhhhhHHHHHHH--HHHhHhhcCCCeEEEeccccccCCCCCchhhhH
Q 042185           66 KIDVLVNNAGVQCVG-PLAEVP--LSAMEQTFNTNVFGPMRLVQA--VVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTA  140 (162)
Q Consensus        66 ~id~vi~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~~~~~--~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~  140 (162)
                      ++|++|||||+.... ++.+.+  .++|++++++|+.+++.+++.  +.+.|.+++.|+||++||..+..+  ....|++
T Consensus       739 ~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g--g~~aYaA  816 (1878)
T 2uv9_A          739 DLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG--NDGLYSE  816 (1878)
T ss_dssp             CCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS--CCSSHHH
T ss_pred             CCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC--CchHHHH
Confidence            999999999987776 888888  899999999999999999977  678887666689999999988876  4678999


Q ss_pred             hHHHHHHHHHHHHHH-hccC
Q 042185          141 SKAALHSLTDTLRLE-LGHF  159 (162)
Q Consensus       141 sKaa~~~l~~~l~~e-~~~~  159 (162)
                      +|+++++|++.++.+ +++.
T Consensus       817 SKAAL~aLt~~laAeEla~~  836 (1878)
T 2uv9_A          817 SKLALETLFNRWYSESWGNY  836 (1878)
T ss_dssp             HHHHHTTHHHHHHHSTTTTT
T ss_pred             HHHHHHHHHHHHHHHHcCCC
Confidence            999999998876554 6654

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.92  E-value=2.4e-24  Score=165.22  Aligned_cols=148  Identities=22%  Similarity=0.279  Sum_probs=128.8

Q ss_pred             CCCCchHHHHHHHHHHCCC-eEEEEecChhh---HHh----hhc-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEE
Q 042185            1 CSQGGIGHALARAFAASDC-RVVATGRSKAT---MAD----LEQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLV   71 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-~vi~~~r~~~~---~~~----~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi   71 (162)
                      ||+||||++++++|+++|+ +|++++|+.+.   .++    +.. ..++.++.||++|.++++.+++++ +.++++|+||
T Consensus       233 GgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~~~g~ld~VI  311 (486)
T 2fr1_A          233 GGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-GDDVPLSAVF  311 (486)
T ss_dssp             TTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-CTTSCEEEEE
T ss_pred             CCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-HhcCCCcEEE
Confidence            8999999999999999999 59999998642   222    222 457889999999999999999998 5678999999


Q ss_pred             ECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHH
Q 042185           72 NNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDT  151 (162)
Q Consensus        72 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~  151 (162)
                      ||||.....++.+.+.++++.++++|+.+++.+.+.+.+    .+.++||++||..+..+.++...|+++|+++++|++.
T Consensus       312 h~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~~~~~V~~SS~a~~~g~~g~~~Yaaaka~l~~la~~  387 (486)
T 2fr1_A          312 HAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE----LDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQ  387 (486)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SCCSEEEEEEEHHHHTCCTTCTTTHHHHHHHHHHHHH
T ss_pred             ECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCc----CCCCEEEEEcChHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence            999998778888999999999999999999999988644    4568999999999999999999999999999998775


Q ss_pred             HH
Q 042185          152 LR  153 (162)
Q Consensus       152 l~  153 (162)
                      ++
T Consensus       388 ~~  389 (486)
T 2fr1_A          388 RR  389 (486)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.92  E-value=3.3e-25  Score=193.56  Aligned_cols=150  Identities=16%  Similarity=0.175  Sum_probs=117.6

Q ss_pred             CCCCchHHHHHHHHHHCCCe-EEEEecChhhH-------Hhhh-cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEE
Q 042185            1 CSQGGIGHALARAFAASDCR-VVATGRSKATM-------ADLE-QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLV   71 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~-vi~~~r~~~~~-------~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi   71 (162)
                      ||++|||+++|++|+++|++ |++++|+.+..       +++. ...++.++.||++|.++++++++++. +++++|++|
T Consensus      1891 Ggs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~-~~g~id~lV 1969 (2512)
T 2vz8_A         1891 GGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEAT-QLGPVGGVF 1969 (2512)
T ss_dssp             STTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHH-HHSCEEEEE
T ss_pred             CCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHH-hcCCCcEEE
Confidence            89999999999999999996 88899985432       1222 24678899999999999999999987 479999999


Q ss_pred             ECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHH
Q 042185           72 NNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDT  151 (162)
Q Consensus        72 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~  151 (162)
                      ||||+....++.+++.++|++.+++|+.+++++.+.+.+.|.+.  ++||++||.++..+.+++..|+++|+++++|++.
T Consensus      1970 nnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~--g~iV~iSS~ag~~g~~g~~~Y~aaKaal~~l~~~ 2047 (2512)
T 2vz8_A         1970 NLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPEL--DYFVIFSSVSCGRGNAGQANYGFANSAMERICEK 2047 (2512)
T ss_dssp             ECCCC----------------CTTTTHHHHHHHHHHHHHHCTTC--CEEEEECCHHHHTTCTTCHHHHHHHHHHHHHHHH
T ss_pred             ECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC--CEEEEecchhhcCCCCCcHHHHHHHHHHHHHHHH
Confidence            99999877889999999999999999999999999999887543  7999999999999999999999999999999994


Q ss_pred             HH
Q 042185          152 LR  153 (162)
Q Consensus       152 l~  153 (162)
                      ++
T Consensus      2048 rr 2049 (2512)
T 2vz8_A         2048 RR 2049 (2512)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.91  E-value=2.5e-23  Score=160.23  Aligned_cols=145  Identities=23%  Similarity=0.273  Sum_probs=125.3

Q ss_pred             CCCCchHHHHHHHHHHCCC-eEEEEecChhh---HH----hhhc-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEE
Q 042185            1 CSQGGIGHALARAFAASDC-RVVATGRSKAT---MA----DLEQ-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLV   71 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-~vi~~~r~~~~---~~----~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi   71 (162)
                      ||+||||++++++|+++|+ +|++++|+.+.   .+    ++.. ..++.++.||++|.++++.++++     +++|+||
T Consensus       266 GgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~-----~~ld~VV  340 (511)
T 2z5l_A          266 GGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA-----YPPNAVF  340 (511)
T ss_dssp             TTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH-----SCCSEEE
T ss_pred             CCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc-----CCCcEEE
Confidence            8999999999999999999 69999998642   22    2222 35788999999999999998877     6999999


Q ss_pred             ECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHH
Q 042185           72 NNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDT  151 (162)
Q Consensus        72 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~  151 (162)
                      ||||+....++.+.+.++++.++++|+.+++.+.+.+.+.   .+.++||++||..+..+.++...|+++|++++.|++.
T Consensus       341 h~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---~~~~~~V~~SS~a~~~g~~g~~~YaaaKa~ld~la~~  417 (511)
T 2z5l_A          341 HTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI---KGLDAFVLFSSVTGTWGNAGQGAYAAANAALDALAER  417 (511)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC---TTCCCEEEEEEGGGTTCCTTBHHHHHHHHHHHHHHHH
T ss_pred             ECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEEEeCHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence            9999988888889999999999999999999998876432   1457999999999999999999999999999999987


Q ss_pred             HH
Q 042185          152 LR  153 (162)
Q Consensus       152 l~  153 (162)
                      ++
T Consensus       418 ~~  419 (511)
T 2z5l_A          418 RR  419 (511)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.91  E-value=1.3e-23  Score=149.87  Aligned_cols=135  Identities=19%  Similarity=0.219  Sum_probs=114.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|+||++++++|+++|++|++++|+.....    ...+.++.+|++|.++++++++       ++|+||||||..   
T Consensus        10 Gasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~-------~~D~vi~~Ag~~---   75 (267)
T 3rft_A           10 GAAGQLGRVMRERLAPMAEILRLADLSPLDPA----GPNEECVQCDLADANAVNAMVA-------GCDGIVHLGGIS---   75 (267)
T ss_dssp             STTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----CTTEEEEECCTTCHHHHHHHHT-------TCSEEEECCSCC---
T ss_pred             CCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----CCCCEEEEcCCCCHHHHHHHHc-------CCCEEEECCCCc---
Confidence            89999999999999999999999999875433    4578999999999999888776       689999999973   


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccccc------------CCCCCchhhhHhHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVA------------APGPWAGTYTASKAALHSL  148 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~------------~~~~~~~~y~~sKaa~~~l  148 (162)
                           +.+.|+..+++|+.+++.+++++.    +.+.++||++||..++            .+.++...|+.+|++.+.+
T Consensus        76 -----~~~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  146 (267)
T 3rft_A           76 -----VEKPFEQILQGNIIGLYNLYEAAR----AHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENL  146 (267)
T ss_dssp             -----SCCCHHHHHHHHTHHHHHHHHHHH----HTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             -----CcCCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Confidence                 235688999999999999999983    3456899999998877            3445667899999999999


Q ss_pred             HHHHHHHhcc
Q 042185          149 TDTLRLELGH  158 (162)
Q Consensus       149 ~~~l~~e~~~  158 (162)
                      ++.++.+++.
T Consensus       147 ~~~~a~~~g~  156 (267)
T 3rft_A          147 ARMYFDKFGQ  156 (267)
T ss_dssp             HHHHHHHHCC
T ss_pred             HHHHHHHhCC
Confidence            9999988653

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.88  E-value=1.8e-22  Score=177.01  Aligned_cols=156  Identities=17%  Similarity=0.194  Sum_probs=120.9

Q ss_pred             CCCCc-hHHHHHHHHHHCCCeEEEEecChhh-----HHhhhc-----CCceeEEEeccCChHHHHHHHHHHHH----HcC
Q 042185            1 CSQGG-IGHALARAFAASDCRVVATGRSKAT-----MADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLE----KFG   65 (162)
Q Consensus         1 Ga~~g-iG~~ia~~l~~~g~~vi~~~r~~~~-----~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~----~~~   65 (162)
                      ||++| ||+++|+.|+++|++|++++|+.+.     ++++..     ...+..+.+|++|.++++++++++.+    ++|
T Consensus      2143 GAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~~~~~~~fG 2222 (3089)
T 3zen_D         2143 GASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWVGTEQTESLG 2222 (3089)
T ss_dssp             SCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHTSCCEEEES
T ss_pred             CCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHHHhhhhhhcC
Confidence            88999 9999999999999999999998665     444322     24678899999999999999999998    899


Q ss_pred             CccEEEECCCC----CCC-CCCCCCChHHH----HHHHHhhhhhHHHHHHHHHHhHhhcCCC----eEEEeccccccCCC
Q 042185           66 KIDVLVNNAGV----QCV-GPLAEVPLSAM----EQTFNTNVFGPMRLVQAVVPHMAYRKKG----KIINVGSVTVAAPG  132 (162)
Q Consensus        66 ~id~vi~~ag~----~~~-~~~~~~~~~~~----~~~~~~n~~~~~~~~~~~~~~~~~~~~~----~iv~isS~~~~~~~  132 (162)
                      ++|++|||||+    ... ....+.+.++|    +..+++|+.+++.+++.+.+.|+.++.+    .++..++..+.  .
T Consensus      2223 ~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ss~~g~--~ 2300 (3089)
T 3zen_D         2223 PQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPGSPNRGM--F 2300 (3089)
T ss_dssp             SSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEECSSTTS--C
T ss_pred             CCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEECCccccc--C
Confidence            99999999997    211 22233344444    4559999999999999999999766532    22333333332  3


Q ss_pred             CCchhhhHhHHHHHHHHHHHHHH--hcc
Q 042185          133 PWAGTYTASKAALHSLTDTLRLE--LGH  158 (162)
Q Consensus       133 ~~~~~y~~sKaa~~~l~~~l~~e--~~~  158 (162)
                      +....|++||+|+.+|+|+++.|  +++
T Consensus      2301 g~~~aYsASKaAl~~LtrslA~E~~~a~ 2328 (3089)
T 3zen_D         2301 GGDGAYGEAKSALDALENRWSAEKSWAE 2328 (3089)
T ss_dssp             SSCSSHHHHGGGHHHHHHHHHHCSTTTT
T ss_pred             CCchHHHHHHHHHHHHHHHHHhccccCC
Confidence            34568999999999999999999  664

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.84  E-value=4e-20  Score=135.67  Aligned_cols=145  Identities=18%  Similarity=0.211  Sum_probs=116.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhH-----HhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATM-----ADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~-----~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|+||++++++|+++|++|++++|+.+..     +.......+.++.+|++|.++++++++.+     ++|+|||+||
T Consensus        10 GatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~   84 (345)
T 2z1m_A           10 GIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-----QPDEVYNLAA   84 (345)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-----CCSEEEECCC
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhc-----CCCEEEECCC
Confidence            8999999999999999999999999986532     22212246888999999999999998876     8999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccccc-----------CCCCCchhhhHhHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVA-----------APGPWAGTYTASKAA  144 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-----------~~~~~~~~y~~sKaa  144 (162)
                      ....    +.+.++++..+++|+.++..+++++.+ +  ...++||++||...+           .+.++...|+.+|++
T Consensus        85 ~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~-~--~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~  157 (345)
T 2z1m_A           85 QSFV----GVSFEQPILTAEVDAIGVLRILEALRT-V--KPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLF  157 (345)
T ss_dssp             CCCH----HHHTTSHHHHHHHHTHHHHHHHHHHHH-H--CTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHH
T ss_pred             Ccch----hhhhhCHHHHHHHHHHHHHHHHHHHHH-h--CCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHH
Confidence            6421    123456889999999999999999875 2  113799999998654           233456789999999


Q ss_pred             HHHHHHHHHHHhc
Q 042185          145 LHSLTDTLRLELG  157 (162)
Q Consensus       145 ~~~l~~~l~~e~~  157 (162)
                      .+.+++.++.+++
T Consensus       158 ~e~~~~~~~~~~~  170 (345)
T 2z1m_A          158 GHWITVNYREAYN  170 (345)
T ss_dssp             HHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhC
Confidence            9999999988864

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.84  E-value=2.5e-20  Score=136.50  Aligned_cols=136  Identities=15%  Similarity=0.116  Sum_probs=110.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      ||+|+||++++++|+++|++|++++|+.+...+...+ ..+.++.+|++|.++++.+++++     ++|+||||||....
T Consensus        27 GasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~-----~~D~vih~A~~~~~  101 (330)
T 2pzm_A           27 GGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSF-----KPTHVVHSAAAYKD  101 (330)
T ss_dssp             TTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCCCCSC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhc-----CCCEEEECCccCCC
Confidence            8999999999999999999999999975443322222 46788999999999999888776     79999999997533


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC-----C------CchhhhHhHHHHHHH
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG-----P------WAGTYTASKAALHSL  148 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----~------~~~~y~~sKaa~~~l  148 (162)
                      .     +.++++  +++|+.++..+++++..    .+.++||++||...+.+.     +      +...|+.+|++.+.+
T Consensus       102 ~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~Y~~sK~~~e~~  170 (330)
T 2pzm_A          102 P-----DDWAED--AATNVQGSINVAKAASK----AGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAF  170 (330)
T ss_dssp             T-----TCHHHH--HHHHTHHHHHHHHHHHH----HTCSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSHHHHHHHHHHHH
T ss_pred             c-----cccChh--HHHHHHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCccCCCCcCCCCCCCChHHHHHHHHHHH
Confidence            2     445666  99999999999999863    345799999998776543     2      567899999999999


Q ss_pred             HHHH
Q 042185          149 TDTL  152 (162)
Q Consensus       149 ~~~l  152 (162)
                      ++.+
T Consensus       171 ~~~~  174 (330)
T 2pzm_A          171 LMMS  174 (330)
T ss_dssp             HHTC
T ss_pred             HHHc
Confidence            8876

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.84  E-value=1.7e-20  Score=131.38  Aligned_cols=128  Identities=18%  Similarity=0.208  Sum_probs=106.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCce-eEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRF-FVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      ||+|+||++++++|+++|++|++++|+.+..+++.. ..+ .++.+|++         +.+.+.++++|+||||+|....
T Consensus        28 GatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~-~~~~~~~~~Dl~---------~~~~~~~~~~D~vi~~ag~~~~   97 (236)
T 3e8x_A           28 GANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE-RGASDIVVANLE---------EDFSHAFASIDAVVFAAGSGPH   97 (236)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-TTCSEEEECCTT---------SCCGGGGTTCSEEEECCCCCTT
T ss_pred             CCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh-CCCceEEEcccH---------HHHHHHHcCCCEEEECCCCCCC
Confidence            899999999999999999999999999888776654 357 88999998         3344456789999999997432


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC---CCchhhhHhHHHHHHHHH
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG---PWAGTYTASKAALHSLTD  150 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---~~~~~y~~sKaa~~~l~~  150 (162)
                              ++++..+++|+.++..+++++.    +.+.++||++||..+..+.   +....|+.+|++++.+++
T Consensus        98 --------~~~~~~~~~n~~~~~~l~~a~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~~~e~~~~  159 (236)
T 3e8x_A           98 --------TGADKTILIDLWGAIKTIQEAE----KRGIKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADDELK  159 (236)
T ss_dssp             --------SCHHHHHHTTTHHHHHHHHHHH----HHTCCEEEEECCTTCSCGGGSCGGGHHHHHHHHHHHHHHH
T ss_pred             --------CCccccchhhHHHHHHHHHHHH----HcCCCEEEEEecCCCCCCCCChhhhhhHHHHHHHHHHHHH
Confidence                    4588999999999999999873    3456799999997766654   467889999999999876

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.84  E-value=5.2e-20  Score=136.04  Aligned_cols=147  Identities=16%  Similarity=0.231  Sum_probs=115.7

Q ss_pred             CCCCchHHHHHHHHHHC-CCeEEEEecCh--hhHHh---hhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAAS-DCRVVATGRSK--ATMAD---LEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~-g~~vi~~~r~~--~~~~~---~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+|+||++++++|+++ |++|++++|+.  ...+.   +.....+.++.+|++|.+++..++++.     ++|+|||+|
T Consensus         7 GasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A   81 (361)
T 1kew_A            7 GGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQY-----QPDAVMHLA   81 (361)
T ss_dssp             STTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CCSEEEECC
T ss_pred             CCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhc-----CCCEEEECC
Confidence            89999999999999998 79999999864  12222   222357889999999999999888763     899999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-----CCCeEEEeccccccC-------------------
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-----KKGKIINVGSVTVAA-------------------  130 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~-------------------  130 (162)
                      |....    +.+.++++..+++|+.++..+++++.+.|..-     ++++||++||...+.                   
T Consensus        82 ~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E  157 (361)
T 1kew_A           82 AESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTE  157 (361)
T ss_dssp             SCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCT
T ss_pred             CCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCC
Confidence            96431    22345678899999999999999999876431     135999999975432                   


Q ss_pred             --CCCCchhhhHhHHHHHHHHHHHHHHh
Q 042185          131 --PGPWAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus       131 --~~~~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                        +.++...|+.+|++.+.+++.++.++
T Consensus       158 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~  185 (361)
T 1kew_A          158 TTAYAPSSPYSASKASSDHLVRAWRRTY  185 (361)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCccHHHHHHHHHHHHHHHHHh
Confidence              22346689999999999999998876

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.84  E-value=4.8e-20  Score=134.27  Aligned_cols=139  Identities=25%  Similarity=0.305  Sum_probs=113.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|+||++++++|+++|++|++++|+.+. +.    ..+.++.+|++|.++++.+++.     +++|+|||+||.... 
T Consensus        19 GatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vih~A~~~~~-   87 (321)
T 2pk3_A           19 GVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----PNVEMISLDIMDSQRVKKVISD-----IKPDYIFHLAAKSSV-   87 (321)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----TTEEEEECCTTCHHHHHHHHHH-----HCCSEEEECCSCCCH-
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----ceeeEEECCCCCHHHHHHHHHh-----cCCCEEEEcCcccch-
Confidence            899999999999999999999999998654 22    2678899999999999988876     379999999997432 


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC-------------CCchhhhHhHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG-------------PWAGTYTASKAALHS  147 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-------------~~~~~y~~sKaa~~~  147 (162)
                         +.+.++++..+++|+.++..+++++ +.+  .+.++||++||...+.+.             ++...|+.+|++.+.
T Consensus        88 ---~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~--~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~  161 (321)
T 2pk3_A           88 ---KDSWLNKKGTFSTNVFGTLHVLDAV-RDS--NLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGM  161 (321)
T ss_dssp             ---HHHTTCHHHHHHHHHHHHHHHHHHH-HHH--TCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHH
T ss_pred             ---hhhhhcHHHHHHHHHHHHHHHHHHH-HHh--CCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHH
Confidence               1223467899999999999999998 444  246799999998765432             456789999999999


Q ss_pred             HHHHHHHHh
Q 042185          148 LTDTLRLEL  156 (162)
Q Consensus       148 l~~~l~~e~  156 (162)
                      +++.++.++
T Consensus       162 ~~~~~~~~~  170 (321)
T 2pk3_A          162 LARQYVKAY  170 (321)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHc
Confidence            999998764

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.84  E-value=3.8e-20  Score=136.74  Aligned_cols=145  Identities=16%  Similarity=0.135  Sum_probs=116.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhh----cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLE----QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~----~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|+||++++++|+++|++|++++|+.+......    ....+.++.+|+++.+++..+++.+     ++|+|||+||.
T Consensus        16 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~   90 (357)
T 1rkx_A           16 GHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-----QPEIVFHMAAQ   90 (357)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSC
T ss_pred             CCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc-----CCCEEEECCCC
Confidence            89999999999999999999999999865433222    1356889999999999999988876     79999999995


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC------------CCCCchhhhHhHHH
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA------------PGPWAGTYTASKAA  144 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~------------~~~~~~~y~~sKaa  144 (162)
                      ..    ...+.++++..+++|+.++..+++++.+.   ...++||++||...+.            +..+...|+.+|.+
T Consensus        91 ~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~  163 (357)
T 1rkx_A           91 PL----VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGC  163 (357)
T ss_dssp             CC----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHH
T ss_pred             cc----cccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHH
Confidence            21    12345677899999999999999998652   2357999999986432            22346689999999


Q ss_pred             HHHHHHHHHHHhc
Q 042185          145 LHSLTDTLRLELG  157 (162)
Q Consensus       145 ~~~l~~~l~~e~~  157 (162)
                      .+.+++.++.++.
T Consensus       164 ~e~~~~~~~~~~~  176 (357)
T 1rkx_A          164 AELVTSSYRNSFF  176 (357)
T ss_dssp             HHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999998874

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.84  E-value=1.3e-19  Score=134.48  Aligned_cols=147  Identities=20%  Similarity=0.219  Sum_probs=112.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhh-----HHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKAT-----MADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVL   70 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~-----~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~v   70 (162)
                      ||+|+||++++++|+++|++|++++|+.+.     ++.+..     ...+.++.+|++|.++++.+++..     ++|+|
T Consensus         8 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~v   82 (372)
T 1db3_A            8 GVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV-----QPDEV   82 (372)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH-----CCSEE
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc-----CCCEE
Confidence            899999999999999999999999998643     222211     246788899999999999988876     79999


Q ss_pred             EECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC-----------CCCchhhh
Q 042185           71 VNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP-----------GPWAGTYT  139 (162)
Q Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~y~  139 (162)
                      ||+||....    ..+.++++..+++|+.++..+++++.+...+ ++++||++||...+..           ..+...|+
T Consensus        83 ih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~  157 (372)
T 1db3_A           83 YNLGAMSHV----AVSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYA  157 (372)
T ss_dssp             EECCCCCTT----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHH
T ss_pred             EECCcccCc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHH
Confidence            999997432    2344567889999999999999998775422 2379999999866532           12356899


Q ss_pred             HhHHHHHHHHHHHHHHhc
Q 042185          140 ASKAALHSLTDTLRLELG  157 (162)
Q Consensus       140 ~sKaa~~~l~~~l~~e~~  157 (162)
                      .+|++.+.+++.++.+++
T Consensus       158 ~sK~~~e~~~~~~~~~~~  175 (372)
T 1db3_A          158 VAKLYAYWITVNYRESYG  175 (372)
T ss_dssp             HHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHhC
Confidence            999999999999988753

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.83  E-value=1.1e-19  Score=135.19  Aligned_cols=147  Identities=16%  Similarity=0.125  Sum_probs=115.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhh-----HHhhh------cCCceeEEEeccCChHHHHHHHHHHHHHcCCccE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKAT-----MADLE------QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDV   69 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~-----~~~~~------~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~   69 (162)
                      ||+|+||++++++|+++|++|++++|+.+.     ++.+.      ....+.++.+|++|.+++..+++.+     ++|+
T Consensus        31 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~  105 (375)
T 1t2a_A           31 GITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV-----KPTE  105 (375)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc-----CCCE
Confidence            899999999999999999999999997543     22221      1246788999999999999988876     7999


Q ss_pred             EEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC-----------CCCchhh
Q 042185           70 LVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP-----------GPWAGTY  138 (162)
Q Consensus        70 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~y  138 (162)
                      |||+||....    ..+.++++..+++|+.++..+++++.+... ++.++||++||...+..           ..+...|
T Consensus       106 vih~A~~~~~----~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~-~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y  180 (375)
T 1t2a_A          106 IYNLGAQSHV----KISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKETTPFYPRSPY  180 (375)
T ss_dssp             EEECCSCCCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHH
T ss_pred             EEECCCcccc----cccccCHHHHHHHHHHHHHHHHHHHHHhCC-CccceEEEecchhhhCCCCCCCCCccCCCCCCChh
Confidence            9999996432    123467788999999999999999876542 22379999999876542           2245689


Q ss_pred             hHhHHHHHHHHHHHHHHhc
Q 042185          139 TASKAALHSLTDTLRLELG  157 (162)
Q Consensus       139 ~~sKaa~~~l~~~l~~e~~  157 (162)
                      +.+|++.+.+++.++.+++
T Consensus       181 ~~sK~~~e~~~~~~~~~~~  199 (375)
T 1t2a_A          181 GAAKLYAYWIVVNFREAYN  199 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHhC
Confidence            9999999999999987753

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.83  E-value=7.3e-20  Score=134.32  Aligned_cols=144  Identities=17%  Similarity=0.182  Sum_probs=113.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+|+||++++++|+++|++|++++|+.+...+...      ...+.++.+|++|.+++++++++     +++|+|||+|
T Consensus        12 GatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vih~A   86 (341)
T 3enk_A           12 GGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HPITAAIHFA   86 (341)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SCCCEEEECC
T ss_pred             cCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cCCcEEEECc
Confidence            899999999999999999999999997654332211      35788999999999999998876     4899999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC-----------CCCCchhhhHhHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA-----------PGPWAGTYTASKA  143 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~~y~~sKa  143 (162)
                      |.....    ...+..+..+++|+.++..+++++    ++.+.++||++||...+.           +..+...|+.+|.
T Consensus        87 ~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~  158 (341)
T 3enk_A           87 ALKAVG----ESVAKPIEYYRNNLDSLLSLLRVM----RERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKL  158 (341)
T ss_dssp             CCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHH
T ss_pred             cccccC----ccccChHHHHHHHHHHHHHHHHHH----HhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHH
Confidence            975332    123445678889999998887764    445567999999977652           2223468999999


Q ss_pred             HHHHHHHHHHHHhc
Q 042185          144 ALHSLTDTLRLELG  157 (162)
Q Consensus       144 a~~~l~~~l~~e~~  157 (162)
                      +.+.+++.++.++.
T Consensus       159 ~~e~~~~~~~~~~~  172 (341)
T 3enk_A          159 MAEQILRDVEAADP  172 (341)
T ss_dssp             HHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHhhcCC
Confidence            99999999988865

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.83  E-value=2.3e-19  Score=131.85  Aligned_cols=144  Identities=17%  Similarity=0.141  Sum_probs=114.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh-h----hHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK-A----TMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~-~----~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|+||++++++|+++|++|++++|+. +    ....+....++.++.+|++|.++++.+++..     ++|+|||+||
T Consensus         8 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~   82 (347)
T 1orr_A            8 GGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-----MPDSCFHLAG   82 (347)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-----CCSEEEECCC
T ss_pred             CCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhcc-----CCCEEEECCc
Confidence            8999999999999999999999998742 1    1222333346889999999999999888763     7999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC-------------------------
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA-------------------------  130 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-------------------------  130 (162)
                      ....    +.+.++++..+++|+.++..+++++.+...   +++||++||...+.                         
T Consensus        83 ~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~---~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e  155 (347)
T 1orr_A           83 QVAM----TTSIDNPCMDFEINVGGTLNLLEAVRQYNS---NCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDE  155 (347)
T ss_dssp             CCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCT
T ss_pred             ccCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC---CceEEEeccHHHhCCCCcCCcccccccccccccccCccc
Confidence            6422    123457788999999999999999877542   26999999976543                         


Q ss_pred             --CCCCchhhhHhHHHHHHHHHHHHHHh
Q 042185          131 --PGPWAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus       131 --~~~~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                        +..+...|+.+|++.+.+++.++.++
T Consensus       156 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~  183 (347)
T 1orr_A          156 STQLDFHSPYGCSKGAADQYMLDYARIF  183 (347)
T ss_dssp             TSCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCchHHHHHHHHHHHHHHHHHh
Confidence              22356689999999999999998875

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.83  E-value=1.6e-19  Score=134.43  Aligned_cols=148  Identities=23%  Similarity=0.216  Sum_probs=118.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhh-----HHhhhcC-----C-ceeEEEeccCChHHHHHHHHHHHHHcCCccE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKAT-----MADLEQD-----P-RFFVQELDVLSEQSVQNVLSNVLEKFGKIDV   69 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~-----~~~~~~~-----~-~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~   69 (162)
                      ||+|+||.+++++|+++|++|++++|+.+.     ++.+..+     . .+.++.+|++|.+++..+++.+     ++|+
T Consensus        35 GatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~  109 (381)
T 1n7h_A           35 GITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI-----KPDE  109 (381)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             cCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc-----CCCE
Confidence            899999999999999999999999998653     2222111     2 6788999999999999988876     7999


Q ss_pred             EEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-CCCeEEEeccccccC----------CCCCchhh
Q 042185           70 LVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKIINVGSVTVAA----------PGPWAGTY  138 (162)
Q Consensus        70 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~----------~~~~~~~y  138 (162)
                      |||+||....    ..+.++++..+++|+.++..+++++.+...++ ++++||++||...+.          +..+...|
T Consensus       110 Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~Y  185 (381)
T 1n7h_A          110 VYNLAAQSHV----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPY  185 (381)
T ss_dssp             EEECCSCCCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHH
T ss_pred             EEECCcccCc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCCCCCCCch
Confidence            9999996432    12356788999999999999999998876432 356999999987553          23456789


Q ss_pred             hHhHHHHHHHHHHHHHHhc
Q 042185          139 TASKAALHSLTDTLRLELG  157 (162)
Q Consensus       139 ~~sKaa~~~l~~~l~~e~~  157 (162)
                      +.+|.+.+.+++.++.+++
T Consensus       186 ~~sK~~~E~~~~~~~~~~~  204 (381)
T 1n7h_A          186 AASKCAAHWYTVNYREAYG  204 (381)
T ss_dssp             HHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHhC
Confidence            9999999999999988753

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.82  E-value=1e-19  Score=134.14  Aligned_cols=144  Identities=17%  Similarity=0.278  Sum_probs=117.0

Q ss_pred             CCCCchHHHHHHHHHHC-CC-eEEEEecChhhHHhhhc---CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAAS-DC-RVVATGRSKATMADLEQ---DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~-g~-~vi~~~r~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|+||++++++|+++ |+ +|++++|+.+....+..   ...+.++.+|++|.++++.+++       ++|+|||+||
T Consensus        28 GatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~-------~~D~Vih~Aa  100 (344)
T 2gn4_A           28 GGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALE-------GVDICIHAAA  100 (344)
T ss_dssp             TTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTT-------TCSEEEECCC
T ss_pred             CCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHh-------cCCEEEECCC
Confidence            89999999999999999 98 99999999876654432   3578899999999988877653       6899999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....    .........+++|+.++..+++++.+.    +.+++|++||..+..|   ...|+.+|++.+.+++.++.+
T Consensus       101 ~~~~~----~~~~~~~~~~~~Nv~gt~~l~~aa~~~----~v~~~V~~SS~~~~~p---~~~Y~~sK~~~E~~~~~~~~~  169 (344)
T 2gn4_A          101 LKHVP----IAEYNPLECIKTNIMGASNVINACLKN----AISQVIALSTDKAANP---INLYGATKLCSDKLFVSANNF  169 (344)
T ss_dssp             CCCHH----HHHHSHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEECCGGGSSC---CSHHHHHHHHHHHHHHHGGGC
T ss_pred             CCCCC----chhcCHHHHHHHHHHHHHHHHHHHHhC----CCCEEEEecCCccCCC---ccHHHHHHHHHHHHHHHHHHH
Confidence            74321    122345689999999999999998763    4579999999876654   468999999999999999988


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      +++.|++
T Consensus       170 ~~~~g~~  176 (344)
T 2gn4_A          170 KGSSQTQ  176 (344)
T ss_dssp             CCSSCCE
T ss_pred             hCCCCcE
Confidence            7776653

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.82  E-value=4e-19  Score=132.87  Aligned_cols=144  Identities=23%  Similarity=0.261  Sum_probs=112.1

Q ss_pred             CCCCchHHHHHHHHH-HCCCeEEEEecChhh---------HHhhhc----------CCc---eeEEEeccCChHHHHHHH
Q 042185            1 CSQGGIGHALARAFA-ASDCRVVATGRSKAT---------MADLEQ----------DPR---FFVQELDVLSEQSVQNVL   57 (162)
Q Consensus         1 Ga~~giG~~ia~~l~-~~g~~vi~~~r~~~~---------~~~~~~----------~~~---~~~~~~D~~~~~~i~~~~   57 (162)
                      ||+|+||++++++|+ ++|++|++++|+...         .+.+..          ...   +.++.+|++|.++++.++
T Consensus         9 GatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   88 (397)
T 1gy8_A            9 GGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLNGVF   88 (397)
T ss_dssp             TTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHHHHHHHH
Confidence            899999999999999 999999999987543         222211          124   789999999999888777


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCC----
Q 042185           58 SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGP----  133 (162)
Q Consensus        58 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~----  133 (162)
                      ++    ++++|+|||+||.....    .+.++++..+++|+.++..+++++.    +.+.++||++||...+....    
T Consensus        89 ~~----~~~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~~~~iv~~SS~~v~g~~~~~~~  156 (397)
T 1gy8_A           89 TR----HGPIDAVVHMCAFLAVG----ESVRDPLKYYDNNVVGILRLLQAML----LHKCDKIIFSSSAAIFGNPTMGSV  156 (397)
T ss_dssp             HH----SCCCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGGTBSCCC---
T ss_pred             Hh----cCCCCEEEECCCccCcC----cchhhHHHHHHHHhHHHHHHHHHHH----HhCCCEEEEECCHHHhCCCCcccc
Confidence            64    45699999999974321    1346778899999999999999863    34457999999976543222    


Q ss_pred             --------------CchhhhHhHHHHHHHHHHHHHHh
Q 042185          134 --------------WAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus       134 --------------~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                                    +...|+.+|++.+.+++.++.++
T Consensus       157 ~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~  193 (397)
T 1gy8_A          157 STNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY  193 (397)
T ss_dssp             --CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence                          25689999999999999998876

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.82  E-value=1.8e-19  Score=131.92  Aligned_cols=142  Identities=24%  Similarity=0.291  Sum_probs=111.6

Q ss_pred             CCCCchHHHHHHHHHHCC--CeEEEEecCh-----hhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASD--CRVVATGRSK-----ATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g--~~vi~~~r~~-----~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+|+||++++++|+++|  ++|++++|+.     +.++++.....+.++.+|++|.++++.++       .++|+|||+
T Consensus        10 GatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-------~~~d~vih~   82 (336)
T 2hun_A           10 GGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELV-------RKVDGVVHL   82 (336)
T ss_dssp             TTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHH-------HTCSEEEEC
T ss_pred             CCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHh-------hCCCEEEEC
Confidence            899999999999999986  8999999864     12222222357889999999998888776       378999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC-----------CCCCchhhhHhH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA-----------PGPWAGTYTASK  142 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~~y~~sK  142 (162)
                      ||....    +.+.++++..+++|+.++..+++++.+.   ...++||++||...+.           +.++...|+.+|
T Consensus        83 A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK  155 (336)
T 2hun_A           83 AAESHV----DRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATK  155 (336)
T ss_dssp             CCCCCH----HHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHH
T ss_pred             CCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHH
Confidence            996431    1234567889999999999999998774   2247999999976442           334567899999


Q ss_pred             HHHHHHHHHHHHHh
Q 042185          143 AALHSLTDTLRLEL  156 (162)
Q Consensus       143 aa~~~l~~~l~~e~  156 (162)
                      ++.+.+++.++.++
T Consensus       156 ~~~e~~~~~~~~~~  169 (336)
T 2hun_A          156 AASDMLVLGWTRTY  169 (336)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999998875

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.82  E-value=7.8e-20  Score=133.99  Aligned_cols=141  Identities=17%  Similarity=0.180  Sum_probs=111.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc------CCceeEE-EeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ------DPRFFVQ-ELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~------~~~~~~~-~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+|+||++++++|+++|++|++++|+.+..+.+..      ...+.++ .+|++|.++++.+++       ++|+|||+
T Consensus        18 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vih~   90 (342)
T 1y1p_A           18 GANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-------GAAGVAHI   90 (342)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------TCSEEEEC
T ss_pred             CCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc-------CCCEEEEe
Confidence            899999999999999999999999998776544322      2467777 799999887766653       68999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC-CC--------------------
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA-PG--------------------  132 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-~~--------------------  132 (162)
                      |+.....       ++++..+++|+.++..+++++.+   ..+.++||++||...+. +.                    
T Consensus        91 A~~~~~~-------~~~~~~~~~n~~g~~~ll~~~~~---~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~  160 (342)
T 1y1p_A           91 ASVVSFS-------NKYDEVVTPAIGGTLNALRAAAA---TPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDK  160 (342)
T ss_dssp             CCCCSCC-------SCHHHHHHHHHHHHHHHHHHHHT---CTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHH
T ss_pred             CCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHh---CCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhh
Confidence            9975321       24678999999999999999864   13457999999987653 21                    


Q ss_pred             ----------CCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185          133 ----------PWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus       133 ----------~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                                .+...|+.+|.+.+.+++.++.+++.
T Consensus       161 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~  196 (342)
T 1y1p_A          161 AKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP  196 (342)
T ss_dssp             HHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             hccccccccccchHHHHHHHHHHHHHHHHHHHhcCC
Confidence                      12357999999999999999988754

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.81  E-value=4.6e-20  Score=129.46  Aligned_cols=133  Identities=13%  Similarity=0.065  Sum_probs=106.4

Q ss_pred             CCCCchHHHHHHHHHHCCC--eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDC--RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||+|+||++++++|+++|+  +|++++|+.+..++... ..+.++.+|++|.++++++++       ++|++|||+|...
T Consensus        25 Gasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~-------~~d~vi~~ag~~~   96 (242)
T 2bka_A           25 GASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY-KNVNQEVVDFEKLDDYASAFQ-------GHDVGFCCLGTTR   96 (242)
T ss_dssp             CTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGG-GGCEEEECCGGGGGGGGGGGS-------SCSEEEECCCCCH
T ss_pred             CCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccccc-CCceEEecCcCCHHHHHHHhc-------CCCEEEECCCccc
Confidence            8999999999999999999  99999998765443321 357889999999988776653       6899999999632


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      .       .+.++..+++|+.++..+++++    ++.+.++||++||..++.+  ....|+.+|++++.+++.++.
T Consensus        97 ~-------~~~~~~~~~~n~~~~~~~~~~~----~~~~~~~iv~~SS~~~~~~--~~~~Y~~sK~~~e~~~~~~~~  159 (242)
T 2bka_A           97 G-------KAGAEGFVRVDRDYVLKSAELA----KAGGCKHFNLLSSKGADKS--SNFLYLQVKGEVEAKVEELKF  159 (242)
T ss_dssp             H-------HHHHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCTT--CSSHHHHHHHHHHHHHHTTCC
T ss_pred             c-------cCCcccceeeeHHHHHHHHHHH----HHCCCCEEEEEccCcCCCC--CcchHHHHHHHHHHHHHhcCC
Confidence            1       2457889999999998888875    3345679999999877653  446799999999999887543

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.81  E-value=1.8e-18  Score=129.50  Aligned_cols=146  Identities=13%  Similarity=0.086  Sum_probs=113.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHH-----------------hh-----hcCCceeEEEeccCChHHHHHHHH
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMA-----------------DL-----EQDPRFFVQELDVLSEQSVQNVLS   58 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~-----------------~~-----~~~~~~~~~~~D~~~~~~i~~~~~   58 (162)
                      ||+|.||++++++|+++|++|++++|+.....                 .+     .....+.++.+|++|.++++++++
T Consensus        18 G~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~   97 (404)
T 1i24_A           18 GGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFLAESFK   97 (404)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCHHHHHHHHh
Confidence            89999999999999999999999998643211                 11     113567889999999999998887


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCC-CeEEEeccccccC-------
Q 042185           59 NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK-GKIINVGSVTVAA-------  130 (162)
Q Consensus        59 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~isS~~~~~-------  130 (162)
                      ..     ++|+|||+||...... ...+.+.++..+++|+.++..+++++.+.    +. .+||++||...+.       
T Consensus        98 ~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~~~~V~~SS~~vyg~~~~~~~  167 (404)
T 1i24_A           98 SF-----EPDSVVHFGEQRSAPY-SMIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHLVKLGTMGEYGTPNIDIE  167 (404)
T ss_dssp             HH-----CCSEEEECCSCCCHHH-HTSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEECCGGGGCCCSSCBC
T ss_pred             cc-----CCCEEEECCCCCCccc-hhhCccchhhhHHHHHHHHHHHHHHHHHh----CCCcEEEEeCcHHHhCCCCCCCC
Confidence            76     7999999999743221 12256677889999999999999987542    32 4999999976542       


Q ss_pred             -----------------CCCCchhhhHhHHHHHHHHHHHHHHh
Q 042185          131 -----------------PGPWAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus       131 -----------------~~~~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                                       +..+...|+.+|.+.+.+++.++.++
T Consensus       168 E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~  210 (404)
T 1i24_A          168 EGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW  210 (404)
T ss_dssp             SSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc
Confidence                             22345679999999999999988775

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.81  E-value=9e-19  Score=121.46  Aligned_cols=120  Identities=14%  Similarity=0.176  Sum_probs=100.1

Q ss_pred             CCCCchHHHHHHHHH-HCCCeEEEEecChh-hHHhhh-cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFA-ASDCRVVATGRSKA-TMADLE-QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~-~~g~~vi~~~r~~~-~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      ||+|+||++++++|+ ++|++|++++|+.+ .++++. ....+.++.+|++|.++++++++       .+|++|||+|..
T Consensus        12 Gasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vv~~ag~~   84 (221)
T 3r6d_A           12 GAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVT-------NAEVVFVGAMES   84 (221)
T ss_dssp             STTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHT-------TCSEEEESCCCC
T ss_pred             eCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHc-------CCCEEEEcCCCC
Confidence            899999999999999 89999999999988 766653 45678999999999998887764       679999999852


Q ss_pred             CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCch----------hhhHhHHHHHH
Q 042185           78 CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAG----------TYTASKAALHS  147 (162)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~----------~y~~sKaa~~~  147 (162)
                                         |+.     .+.+++.+++.+.++||++||..++.+.+...          .|+.+|.+++.
T Consensus        85 -------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~  140 (221)
T 3r6d_A           85 -------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARN  140 (221)
T ss_dssp             -------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred             -------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHH
Confidence                               222     67778888777778999999998887666544          89999999998


Q ss_pred             HHHH
Q 042185          148 LTDT  151 (162)
Q Consensus       148 l~~~  151 (162)
                      +++.
T Consensus       141 ~~~~  144 (221)
T 3r6d_A          141 VLRE  144 (221)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            8764

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.81  E-value=2.2e-18  Score=126.34  Aligned_cols=137  Identities=18%  Similarity=0.148  Sum_probs=107.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      ||+|+||++++++|+++|++|++++|+.+...+...+ ..+.++.+|++|.++++++++..     ++|+|||+||....
T Consensus        28 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~D~vih~A~~~~~  102 (333)
T 2q1w_A           28 GICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDL-----QPDAVVHTAASYKD  102 (333)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCCCCSC
T ss_pred             CCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhcc-----CCcEEEECceecCC
Confidence            8999999999999999999999999975432222112 46788999999999998888763     79999999997533


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC----CC--------CCc-hhhhHhHHHHH
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA----PG--------PWA-GTYTASKAALH  146 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----~~--------~~~-~~y~~sKaa~~  146 (162)
                      .     +.++++  +++|+.++..+++++.+    .+.++||++||...+.    ..        .+. ..|+.+|++.+
T Consensus       103 ~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~~~~Y~~sK~~~E  171 (333)
T 2q1w_A          103 P-----DDWYND--TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANE  171 (333)
T ss_dssp             T-----TCHHHH--HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGCSCCCSSSBCTTSCCCCTTCHHHHHHHHHH
T ss_pred             C-----ccCChH--HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCcccCCCCcCCCCCCCCCchHHHHHHHH
Confidence            2     335555  99999999999999865    3457999999977654    21        233 78999999999


Q ss_pred             HHHHH-HH
Q 042185          147 SLTDT-LR  153 (162)
Q Consensus       147 ~l~~~-l~  153 (162)
                      .+++. ++
T Consensus       172 ~~~~~s~~  179 (333)
T 2q1w_A          172 DYLEYSGL  179 (333)
T ss_dssp             HHHHHHTC
T ss_pred             HHHHhhhC
Confidence            99987 54

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.81  E-value=9.7e-19  Score=128.04  Aligned_cols=143  Identities=16%  Similarity=0.111  Sum_probs=112.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhh-----HHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKAT-----MADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~-----~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|+||++++++|+++|++|++++|+.+.     ++.......+.++.+|++|.++++.+++..     ++|+|||+||
T Consensus        21 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~A~   95 (335)
T 1rpn_A           21 GITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QPQEVYNLAA   95 (335)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCS
T ss_pred             CCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHc-----CCCEEEECcc
Confidence            899999999999999999999999997643     222212346888999999999999988876     7999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCC-----------CchhhhHhHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGP-----------WAGTYTASKA  143 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~-----------~~~~y~~sKa  143 (162)
                      ....    ..+.++++..+++|+.++..+++++.+    .+ .+++|++||...+.+.+           +...|+.+|.
T Consensus        96 ~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~  167 (335)
T 1rpn_A           96 QSFV----GASWNQPVTTGVVDGLGVTHLLEAIRQ----FSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKL  167 (335)
T ss_dssp             CCCH----HHHTTSHHHHHHHHTHHHHHHHHHHHH----HCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHH
T ss_pred             ccch----hhhhhChHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHH
Confidence            6432    112345678999999999999998754    23 37999999976654322           2457999999


Q ss_pred             HHHHHHHHHHHHh
Q 042185          144 ALHSLTDTLRLEL  156 (162)
Q Consensus       144 a~~~l~~~l~~e~  156 (162)
                      +.+.+++.++.++
T Consensus       168 ~~e~~~~~~~~~~  180 (335)
T 1rpn_A          168 YGHWITVNYRESF  180 (335)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHc
Confidence            9999999988765

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.80  E-value=3e-19  Score=132.25  Aligned_cols=139  Identities=18%  Similarity=0.145  Sum_probs=107.5

Q ss_pred             CCCCchHHHHHHHHHH--CCCeEEEEecChhh------------HHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCC
Q 042185            1 CSQGGIGHALARAFAA--SDCRVVATGRSKAT------------MADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGK   66 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~--~g~~vi~~~r~~~~------------~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   66 (162)
                      ||+|+||++++++|++  +|++|++++|+.+.            .........+.++.+|++|.++++.+      ...+
T Consensus        17 GatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~------~~~~   90 (362)
T 3sxp_A           17 GGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL------EKLH   90 (362)
T ss_dssp             TTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH------TTSC
T ss_pred             CCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh------hccC
Confidence            8999999999999999  99999999996541            11111234678999999999888776      2458


Q ss_pred             ccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC----------CCch
Q 042185           67 IDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG----------PWAG  136 (162)
Q Consensus        67 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~~~~  136 (162)
                      +|+|||+||....      +.++++..+++|+.++..+++++..    . +++||++||...+...          .+..
T Consensus        91 ~D~vih~A~~~~~------~~~~~~~~~~~Nv~gt~~ll~aa~~----~-~~~~V~~SS~~vyg~~~~~~~E~~~~~p~~  159 (362)
T 3sxp_A           91 FDYLFHQAAVSDT------TMLNQELVMKTNYQAFLNLLEIARS----K-KAKVIYASSAGVYGNTKAPNVVGKNESPEN  159 (362)
T ss_dssp             CSEEEECCCCCGG------GCCCHHHHHHHHTHHHHHHHHHHHH----T-TCEEEEEEEGGGGCSCCSSBCTTSCCCCSS
T ss_pred             CCEEEECCccCCc------cccCHHHHHHHHHHHHHHHHHHHHH----c-CCcEEEeCcHHHhCCCCCCCCCCCCCCCCC
Confidence            9999999995322      4466889999999999999998732    2 3569999996554322          2244


Q ss_pred             hhhHhHHHHHHHHHHHHHHh
Q 042185          137 TYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus       137 ~y~~sKaa~~~l~~~l~~e~  156 (162)
                      .|+.+|.+.+.+++.++.++
T Consensus       160 ~Y~~sK~~~E~~~~~~~~~~  179 (362)
T 3sxp_A          160 VYGFSKLCMDEFVLSHSNDN  179 (362)
T ss_dssp             HHHHHHHHHHHHHHHTTTTS
T ss_pred             hhHHHHHHHHHHHHHHhccC
Confidence            69999999999999988763

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.80  E-value=1.3e-18  Score=127.56  Aligned_cols=136  Identities=18%  Similarity=0.194  Sum_probs=104.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|+||++++++|+++|++|++++|+.+..+.+.. ..+.++.+|++|.++++.+++       .+|+|||+|+...  
T Consensus        20 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~a~~~~--   89 (342)
T 2x4g_A           20 GATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAY-LEPECRVAEMLDHAGLERALR-------GLDGVIFSAGYYP--   89 (342)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGG-GCCEEEECCTTCHHHHHHHTT-------TCSEEEEC-------
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhcc-CCeEEEEecCCCHHHHHHHHc-------CCCEEEECCccCc--
Confidence            899999999999999999999999998765544432 367889999999988777654       5899999999642  


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCC----------------chhhhHhHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPW----------------AGTYTASKAA  144 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----------------~~~y~~sKaa  144 (162)
                          ...++++..+++|+.++..+++++.+    .+.++||++||...+.+.+.                ...|+.+|.+
T Consensus        90 ----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~  161 (342)
T 2x4g_A           90 ----SRPRRWQEEVASALGQTNPFYAACLQ----ARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWA  161 (342)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHH----HTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHH
T ss_pred             ----CCCCCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHHH
Confidence                23457788999999999999999866    24579999999877654433                6789999999


Q ss_pred             HHHHHHHHHH
Q 042185          145 LHSLTDTLRL  154 (162)
Q Consensus       145 ~~~l~~~l~~  154 (162)
                      .+.+++.++.
T Consensus       162 ~e~~~~~~~~  171 (342)
T 2x4g_A          162 LDEQAREQAR  171 (342)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHhh
Confidence            9999999876

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.80  E-value=6.2e-19  Score=127.96  Aligned_cols=141  Identities=16%  Similarity=0.185  Sum_probs=109.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhH-HhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATM-ADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~-~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      ||+|+||++++++|+++|++|++++|..+.. +..  ...+.++.+|++|.+++++++++.     .+|++||+|+....
T Consensus         7 GatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~~   79 (311)
T 2p5y_A            7 GGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV--PKGVPFFRVDLRDKEGVERAFREF-----RPTHVSHQAAQASV   79 (311)
T ss_dssp             TTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGS--CTTCCEECCCTTCHHHHHHHHHHH-----CCSEEEECCSCCCH
T ss_pred             eCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhc--ccCeEEEECCCCCHHHHHHHHHhc-----CCCEEEECccccCc
Confidence            8999999999999999999999999854321 111  135678899999999998887753     78999999996432


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccc-cccCC------------CCCchhhhHhHHHHH
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSV-TVAAP------------GPWAGTYTASKAALH  146 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~-~~~~~------------~~~~~~y~~sKaa~~  146 (162)
                          ..+.++++..+++|+.++..+++++.+    .+.++||++||. ..+..            ..+...|+.+|++.+
T Consensus        80 ----~~~~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e  151 (311)
T 2p5y_A           80 ----KVSVEDPVLDFEVNLLGGLNLLEACRQ----YGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFE  151 (311)
T ss_dssp             ----HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHH
T ss_pred             ----hhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHH
Confidence                124566788999999999999998743    345799999997 32211            124568999999999


Q ss_pred             HHHHHHHHHh
Q 042185          147 SLTDTLRLEL  156 (162)
Q Consensus       147 ~l~~~l~~e~  156 (162)
                      .+++.++.++
T Consensus       152 ~~~~~~~~~~  161 (311)
T 2p5y_A          152 HYLSVYGQSY  161 (311)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHc
Confidence            9999998775

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.80  E-value=2.5e-19  Score=124.11  Aligned_cols=124  Identities=18%  Similarity=0.323  Sum_probs=103.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCC-hHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLS-EQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      ||+|+||++++++|+++|++|++++|+.+..+..   ..+.++.+|++| .++++++++       .+|+||||+|....
T Consensus         7 GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~-------~~d~vi~~ag~~~~   76 (219)
T 3dqp_A            7 GSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVHFDVDWTPEEMAKQLH-------GMDAIINVSGSGGK   76 (219)
T ss_dssp             STTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---TTEEEEECCTTSCHHHHHTTTT-------TCSEEEECCCCTTS
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---CCceEEEecccCCHHHHHHHHc-------CCCEEEECCcCCCC
Confidence            8999999999999999999999999998765443   678999999999 877776653       68999999997542


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCC-------chhhhHhHHHHHHHHH
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPW-------AGTYTASKAALHSLTD  150 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------~~~y~~sKaa~~~l~~  150 (162)
                                  ..+++|+.++..+++++    ++.+.++||++||..+..+.+.       ...|+.+|.+.+.+++
T Consensus        77 ------------~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~~~  138 (219)
T 3dqp_A           77 ------------SLLKVDLYGAVKLMQAA----EKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLT  138 (219)
T ss_dssp             ------------SCCCCCCHHHHHHHHHH----HHTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHHHH
T ss_pred             ------------CcEeEeHHHHHHHHHHH----HHhCCCEEEEECcccccCCCcccccccccccHHHHHHHHHHHHHH
Confidence                        16778999998888886    3345579999999888776665       7789999999999886

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.80  E-value=2.1e-19  Score=132.30  Aligned_cols=157  Identities=14%  Similarity=0.032  Sum_probs=120.5

Q ss_pred             CCCCchHHHHHHHHH-HCCCeEEEEecChhhHH----------------hh-hcCCceeEEEeccCChHHHHHHHHHHHH
Q 042185            1 CSQGGIGHALARAFA-ASDCRVVATGRSKATMA----------------DL-EQDPRFFVQELDVLSEQSVQNVLSNVLE   62 (162)
Q Consensus         1 Ga~~giG~~ia~~l~-~~g~~vi~~~r~~~~~~----------------~~-~~~~~~~~~~~D~~~~~~i~~~~~~~~~   62 (162)
                      |||+|||++.+..|+ ..|+.++++++..+..+                .+ ........+.||+++.++++++++++.+
T Consensus        57 GaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~vi~~i~~  136 (401)
T 4ggo_A           57 GCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQVIEEAKK  136 (401)
T ss_dssp             SCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHHHHHHHHH
Confidence            899999999999999 67999999987643221                11 1247889999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCC-------------CC---------------------CCCCChHHHHHHHHhhhhhHH---HHH
Q 042185           63 KFGKIDVLVNNAGVQCV-------------GP---------------------LAEVPLSAMEQTFNTNVFGPM---RLV  105 (162)
Q Consensus        63 ~~~~id~vi~~ag~~~~-------------~~---------------------~~~~~~~~~~~~~~~n~~~~~---~~~  105 (162)
                      .+|++|++||+++....             .|                     +...+.++++....+.-.+.|   ...
T Consensus       137 ~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~s~~s~w~~a  216 (401)
T 4ggo_A          137 KGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGGEDWERWIKQ  216 (401)
T ss_dssp             TTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSSHHHHHHHHH
T ss_pred             hcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHhhhHHHHHHHH
Confidence            99999999999997521             01                     123456777777666555444   444


Q ss_pred             HHHHHhHhhcCCCeEEEeccccccCCCCCc--hhhhHhHHHHHHHHHHHHHHhccC
Q 042185          106 QAVVPHMAYRKKGKIINVGSVTVAAPGPWA--GTYTASKAALHSLTDTLRLELGHF  159 (162)
Q Consensus       106 ~~~~~~~~~~~~~~iv~isS~~~~~~~~~~--~~y~~sKaa~~~l~~~l~~e~~~~  159 (162)
                      +...+.|  .++++++.+|+......+|.+  ..++.+|+++++.++.|+.++++-
T Consensus       217 l~~a~ll--a~G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~~  270 (401)
T 4ggo_A          217 LSKEGLL--EEGCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENPSI  270 (401)
T ss_dssp             HHHTTCE--EEEEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCTTE
T ss_pred             HHhhhcc--cCCceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcCCC
Confidence            5555555  456899999998776666543  478999999999999999999863

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.80  E-value=4.9e-19  Score=130.02  Aligned_cols=144  Identities=13%  Similarity=0.128  Sum_probs=113.9

Q ss_pred             CCCCchHHHHHHHHHHCC-------CeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASD-------CRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g-------~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+|+||.+++++|+++|       ++|++++|+.+.... .....+.++.+|++|.++++.+++      +++|+|||+
T Consensus        21 Ga~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~------~~~d~vih~   93 (342)
T 2hrz_A           21 GAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-GFSGAVDARAADLSAPGEAEKLVE------ARPDVIFHL   93 (342)
T ss_dssp             TTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-TCCSEEEEEECCTTSTTHHHHHHH------TCCSEEEEC
T ss_pred             CCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-ccCCceeEEEcCCCCHHHHHHHHh------cCCCEEEEC
Confidence            899999999999999999       899999998653322 123467889999999998887765      489999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-CCCeEEEeccccccCCC-C----------CchhhhHh
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKIINVGSVTVAAPG-P----------WAGTYTAS  141 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~-~----------~~~~y~~s  141 (162)
                      ||....     .+.++++..+++|+.++..+++++.+...+. +.++||++||...+.+. +          +...|+.+
T Consensus        94 A~~~~~-----~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~s  168 (342)
T 2hrz_A           94 AAIVSG-----EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQ  168 (342)
T ss_dssp             CCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHHHH
T ss_pred             CccCcc-----cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHHHH
Confidence            996431     2456788999999999999999987643221 25799999998766543 2          56789999


Q ss_pred             HHHHHHHHHHHHHHh
Q 042185          142 KAALHSLTDTLRLEL  156 (162)
Q Consensus       142 Kaa~~~l~~~l~~e~  156 (162)
                      |++.+.+++.++.+.
T Consensus       169 K~~~e~~~~~~~~~~  183 (342)
T 2hrz_A          169 KAICELLLSDYSRRG  183 (342)
T ss_dssp             HHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhc
Confidence            999999999988763

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.80  E-value=1.2e-18  Score=127.73  Aligned_cols=143  Identities=20%  Similarity=0.243  Sum_probs=108.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh----hHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA----TMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~----~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+|+||++++++|+++|++|++++|...    ..+.+..  ...+.++.+|+++.++++.++++.     ++|+|||+|
T Consensus         7 GatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~D~vih~A   81 (338)
T 1udb_A            7 GGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AIDTVIHFA   81 (338)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCSEEEECC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhcc-----CCCEEEECC
Confidence            89999999999999999999999886422    2222211  345788899999999988887652     699999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC-----------C-CCchhhhHhH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP-----------G-PWAGTYTASK  142 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~-~~~~~y~~sK  142 (162)
                      |.....    ...++++..+++|+.++..+++++    ++.+.++||++||...+..           . +....|+.+|
T Consensus        82 ~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK  153 (338)
T 1udb_A           82 GLKAVG----ESVQKPLEYYDNNVNGTLRLISAM----RAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSK  153 (338)
T ss_dssp             SCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHH
T ss_pred             ccCccc----cchhcHHHHHHHHHHHHHHHHHHH----HhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHH
Confidence            964321    123456778999999999998865    3345579999999765421           1 2366899999


Q ss_pred             HHHHHHHHHHHHHh
Q 042185          143 AALHSLTDTLRLEL  156 (162)
Q Consensus       143 aa~~~l~~~l~~e~  156 (162)
                      ++.+.+++.++.+.
T Consensus       154 ~~~e~~~~~~~~~~  167 (338)
T 1udb_A          154 LMVEQILTDLQKAQ  167 (338)
T ss_dssp             HHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHhc
Confidence            99999999998774

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.80  E-value=8.8e-19  Score=123.31  Aligned_cols=138  Identities=14%  Similarity=0.059  Sum_probs=106.0

Q ss_pred             CCCCchHHHHHHHHHHC--CCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAAS--DCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||+|+||++++++|+++  |++|++++|+.+..+++  ...+.++.+|++|.++++++++       .+|+||||+|...
T Consensus        11 GasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi~~a~~~~   81 (253)
T 1xq6_A           11 GASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI--GGEADVFIGDITDADSINPAFQ-------GIDALVILTSAVP   81 (253)
T ss_dssp             STTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT--TCCTTEEECCTTSHHHHHHHHT-------TCSEEEECCCCCC
T ss_pred             cCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc--CCCeeEEEecCCCHHHHHHHHc-------CCCEEEEeccccc
Confidence            89999999999999999  89999999998776655  3467789999999988887764       5899999999753


Q ss_pred             CCCC---------CCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchh-----hhHhHHH
Q 042185           79 VGPL---------AEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGT-----YTASKAA  144 (162)
Q Consensus        79 ~~~~---------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~-----y~~sKaa  144 (162)
                      ....         .+...+.++..+++|+.++..+++++.+    .+.++||++||..+..+.++...     |..+|.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~y~~sK~~  157 (253)
T 1xq6_A           82 KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV----AGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRK  157 (253)
T ss_dssp             EECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHH----HTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHH
T ss_pred             cccccccccccccchhhccccccceeeeHHHHHHHHHHHHH----cCCCEEEEEcCccCCCCCCccccccchhHHHHHHH
Confidence            2111         1223344557789999999888887643    44579999999887765554444     4559999


Q ss_pred             HHHHHHH
Q 042185          145 LHSLTDT  151 (162)
Q Consensus       145 ~~~l~~~  151 (162)
                      ++.+++.
T Consensus       158 ~e~~~~~  164 (253)
T 1xq6_A          158 AEQYLAD  164 (253)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHh
Confidence            9988763

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.80  E-value=1.7e-18  Score=126.46  Aligned_cols=142  Identities=18%  Similarity=0.202  Sum_probs=111.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|+||++++++|+++|++|++++|+.....+.. ...+.++.+|++|.+++++++++     .++|+|||+|+.....
T Consensus         8 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~vih~a~~~~~~   81 (330)
T 2c20_A            8 GGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAI-TEGAKFYNGDLRDKAFLRDVFTQ-----ENIEAVMHFAADSLVG   81 (330)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGS-CTTSEEEECCTTCHHHHHHHHHH-----SCEEEEEECCCCCCHH
T ss_pred             CCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhc-CCCcEEEECCCCCHHHHHHHHhh-----cCCCEEEECCcccCcc
Confidence            89999999999999999999999998754322211 12678899999999988888765     3899999999964321


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC-----------CCCchhhhHhHHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP-----------GPWAGTYTASKAALHSLT  149 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~y~~sKaa~~~l~  149 (162)
                          .+.++++..+++|+.++..+++++..    .+.+++|++||...+..           ..+...|+.+|.+.+.++
T Consensus        82 ----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  153 (330)
T 2c20_A           82 ----VSMEKPLQYYNNNVYGALCLLEVMDE----FKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKML  153 (330)
T ss_dssp             ----HHHHSHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHH
T ss_pred             ----ccccCHHHHHHHHhHHHHHHHHHHHH----cCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHH
Confidence                13467788999999999999988633    44579999999766532           123578999999999999


Q ss_pred             HHHHHHh
Q 042185          150 DTLRLEL  156 (162)
Q Consensus       150 ~~l~~e~  156 (162)
                      +.++.++
T Consensus       154 ~~~~~~~  160 (330)
T 2c20_A          154 HWYSQAS  160 (330)
T ss_dssp             HHHHHTS
T ss_pred             HHHHHHh
Confidence            9988764

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.80  E-value=1.6e-18  Score=127.83  Aligned_cols=141  Identities=16%  Similarity=0.155  Sum_probs=112.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh----hHHhhhc------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA----TMADLEQ------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVL   70 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~----~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~v   70 (162)
                      ||+|+||++++++|+++|++|++++|+..    .++.+..      ...+.++.+|++|.++++++++       ++|+|
T Consensus        34 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~v  106 (352)
T 1sb8_A           34 GVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA-------GVDYV  106 (352)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT-------TCSEE
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc-------CCCEE
Confidence            89999999999999999999999999653    2332221      2568899999999988877764       78999


Q ss_pred             EECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCC-----------Cchhhh
Q 042185           71 VNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGP-----------WAGTYT  139 (162)
Q Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~~~~y~  139 (162)
                      ||+||.....    .+.++++..+++|+.++..+++++.+    .+.++||++||...+.+.+           +...|+
T Consensus       107 ih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~  178 (352)
T 1sb8_A          107 LHQAALGSVP----RSINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYA  178 (352)
T ss_dssp             EECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHH
T ss_pred             EECCcccCch----hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhH
Confidence            9999964321    13467888999999999999998855    3457999999987765432           356899


Q ss_pred             HhHHHHHHHHHHHHHHh
Q 042185          140 ASKAALHSLTDTLRLEL  156 (162)
Q Consensus       140 ~sKaa~~~l~~~l~~e~  156 (162)
                      .+|.+.+.+++.++.++
T Consensus       179 ~sK~~~e~~~~~~~~~~  195 (352)
T 1sb8_A          179 VTKYVNELYADVFSRCY  195 (352)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHc
Confidence            99999999999998775

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.79  E-value=2e-18  Score=127.00  Aligned_cols=142  Identities=16%  Similarity=0.247  Sum_probs=111.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh----------hHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCcc
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA----------TMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKID   68 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~----------~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id   68 (162)
                      ||+|+||++++++|+++|++|++++|+..          ..+++..  ...+.++.+|++|.++++.++++.     ++|
T Consensus         9 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~-----~~d   83 (348)
T 1ek6_A            9 GGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-----SFM   83 (348)
T ss_dssp             TTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-----CEE
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-----CCC
Confidence            89999999999999999999999987532          2222221  356789999999999888887653     799


Q ss_pred             EEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC------------CCCch
Q 042185           69 VLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP------------GPWAG  136 (162)
Q Consensus        69 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~------------~~~~~  136 (162)
                      +|||+||.....    .+.++++..+++|+.++..+++++.    +.+.++||++||...+..            .|...
T Consensus        84 ~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~  155 (348)
T 1ek6_A           84 AVIHFAGLKAVG----ESVQKPLDYYRVNLTGTIQLLEIMK----AHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTN  155 (348)
T ss_dssp             EEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSS
T ss_pred             EEEECCCCcCcc----chhhchHHHHHHHHHHHHHHHHHHH----HhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCC
Confidence            999999964321    1345678899999999999988753    345579999999876532            12267


Q ss_pred             hhhHhHHHHHHHHHHHHHH
Q 042185          137 TYTASKAALHSLTDTLRLE  155 (162)
Q Consensus       137 ~y~~sKaa~~~l~~~l~~e  155 (162)
                      .|+.+|++.+.+++.++.+
T Consensus       156 ~Y~~sK~~~e~~~~~~~~~  174 (348)
T 1ek6_A          156 PYGKSKFFIEEMIRDLCQA  174 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHhc
Confidence            8999999999999999876

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.79  E-value=3.5e-19  Score=126.79  Aligned_cols=132  Identities=18%  Similarity=0.200  Sum_probs=106.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|+||++++++|+++|++|++++|+.+...    ...+.++.+|++|.+++..+++       .+|+|||++|..   
T Consensus         9 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi~~a~~~---   74 (267)
T 3ay3_A            9 GAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA----EAHEEIVACDLADAQAVHDLVK-------DCDGIIHLGGVS---   74 (267)
T ss_dssp             STTSHHHHHHGGGGGGTEEEEEECCSSCCCCC----CTTEEECCCCTTCHHHHHHHHT-------TCSEEEECCSCC---
T ss_pred             CCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc----CCCccEEEccCCCHHHHHHHHc-------CCCEEEECCcCC---
Confidence            89999999999999999999999999865321    1356888999999988877764       589999999974   


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCC------------CchhhhHhHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGP------------WAGTYTASKAALHSL  148 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------~~~~y~~sKaa~~~l  148 (162)
                           +.+.++..+++|+.++..+++++.+    .+.++||++||...+.+.+            +...|+.+|++.+.+
T Consensus        75 -----~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~  145 (267)
T 3ay3_A           75 -----VERPWNDILQANIIGAYNLYEAARN----LGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDL  145 (267)
T ss_dssp             -----SCCCHHHHHHHTHHHHHHHHHHHHH----TTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             -----CCCCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Confidence                 1245688999999999999998754    4457999999987664432            347899999999999


Q ss_pred             HHHHHHH
Q 042185          149 TDTLRLE  155 (162)
Q Consensus       149 ~~~l~~e  155 (162)
                      ++.++.+
T Consensus       146 ~~~~~~~  152 (267)
T 3ay3_A          146 ASLYYHK  152 (267)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHH
Confidence            9988654

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.79  E-value=3.5e-18  Score=125.25  Aligned_cols=141  Identities=24%  Similarity=0.294  Sum_probs=110.3

Q ss_pred             CCCCchHHHHHHHHHHC---C---CeEEEEecCh-----hhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccE
Q 042185            1 CSQGGIGHALARAFAAS---D---CRVVATGRSK-----ATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDV   69 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~---g---~~vi~~~r~~-----~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~   69 (162)
                      ||+|+||++++++|+++   |   ++|++++|+.     +.++.+.....+.++.+|++|.++++.++       .++|+
T Consensus         7 GatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-------~~~d~   79 (337)
T 1r6d_A            7 GGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAREL-------RGVDA   79 (337)
T ss_dssp             TTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHT-------TTCCE
T ss_pred             CCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHh-------cCCCE
Confidence            89999999999999997   8   9999999864     22222322357889999999998877765       47999


Q ss_pred             EEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC-----------CCCCchhh
Q 042185           70 LVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA-----------PGPWAGTY  138 (162)
Q Consensus        70 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~~y  138 (162)
                      |||+||....    +.+.++++..+++|+.++..+++++.+.    +.++||++||...+.           +..+...|
T Consensus        80 Vih~A~~~~~----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y  151 (337)
T 1r6d_A           80 IVHFAAESHV----DRSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPY  151 (337)
T ss_dssp             EEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHH
T ss_pred             EEECCCccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEecchHHhCCCCCCCCCCCCCCCCCCch
Confidence            9999996432    1233566789999999999999998663    346999999976542           23456789


Q ss_pred             hHhHHHHHHHHHHHHHHh
Q 042185          139 TASKAALHSLTDTLRLEL  156 (162)
Q Consensus       139 ~~sKaa~~~l~~~l~~e~  156 (162)
                      +.+|.+.+.+++.++.++
T Consensus       152 ~~sK~~~e~~~~~~~~~~  169 (337)
T 1r6d_A          152 AASKAGSDLVARAYHRTY  169 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999999999988775

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.79  E-value=6.4e-19  Score=127.82  Aligned_cols=138  Identities=18%  Similarity=0.138  Sum_probs=109.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|+||++++++|+++|++|++++|+.+...+.. ...+.++.+|++|.+ +...++       . |+|||+|+...  
T Consensus         7 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~d~~-~~~~~~-------~-d~vih~A~~~~--   74 (312)
T 3ko8_A            7 GGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-NPSAELHVRDLKDYS-WGAGIK-------G-DVVFHFAANPE--   74 (312)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-CTTSEEECCCTTSTT-TTTTCC-------C-SEEEECCSSCS--
T ss_pred             CCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-CCCceEEECccccHH-HHhhcC-------C-CEEEECCCCCC--
Confidence            89999999999999999999999999866543332 456889999999986 544332       2 99999999532  


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC-----------CCCCchhhhHhHHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA-----------PGPWAGTYTASKAALHSLT  149 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~~y~~sKaa~~~l~  149 (162)
                        ...+.++++..+++|+.++..+++++..    .+.++||++||...+.           +..+...|+.+|.+.+.++
T Consensus        75 --~~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~  148 (312)
T 3ko8_A           75 --VRLSTTEPIVHFNENVVATFNVLEWARQ----TGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMC  148 (312)
T ss_dssp             --SSGGGSCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             --chhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Confidence              2345667889999999999999998743    4456999999987653           2334678999999999999


Q ss_pred             HHHHHHh
Q 042185          150 DTLRLEL  156 (162)
Q Consensus       150 ~~l~~e~  156 (162)
                      +.++.++
T Consensus       149 ~~~~~~~  155 (312)
T 3ko8_A          149 ATYARLF  155 (312)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9999876

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.78  E-value=2.8e-18  Score=124.61  Aligned_cols=138  Identities=18%  Similarity=0.197  Sum_probs=106.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|+||++++++|+++|..|++..++....+..  ...+.++.+|+++ +++..+++       .+|.|||+|+...  
T Consensus         8 GatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~--~~~~~~~~~Dl~~-~~~~~~~~-------~~d~vih~a~~~~--   75 (313)
T 3ehe_A            8 GGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV--NEAARLVKADLAA-DDIKDYLK-------GAEEVWHIAANPD--   75 (313)
T ss_dssp             TTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS--CTTEEEECCCTTT-SCCHHHHT-------TCSEEEECCCCCC--
T ss_pred             CCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc--CCCcEEEECcCCh-HHHHHHhc-------CCCEEEECCCCCC--
Confidence            8999999999999999995555554544333222  3568889999998 77776654       7899999999532  


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC-----------CCCCchhhhHhHHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA-----------PGPWAGTYTASKAALHSLT  149 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~~y~~sKaa~~~l~  149 (162)
                        ...+.++++..+++|+.++..+++++.    +.+.++||++||...+.           +..+...|+.+|.+.+.++
T Consensus        76 --~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  149 (313)
T 3ehe_A           76 --VRIGAENPDEIYRNNVLATYRLLEAMR----KAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALI  149 (313)
T ss_dssp             --CC-CCCCHHHHHHHHHHHHHHHHHHHH----HHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             --hhhhhhCHHHHHHHHHHHHHHHHHHHH----HcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence              234567788999999999999988853    34567999999987652           3345678999999999999


Q ss_pred             HHHHHHh
Q 042185          150 DTLRLEL  156 (162)
Q Consensus       150 ~~l~~e~  156 (162)
                      +.++.++
T Consensus       150 ~~~~~~~  156 (313)
T 3ehe_A          150 ESYCHTF  156 (313)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHhc
Confidence            9998876

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.77  E-value=2.2e-18  Score=125.22  Aligned_cols=132  Identities=17%  Similarity=0.192  Sum_probs=82.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|+||++++++|+++|++|++++|+.+.     .  .  ++.+|+++.+++..+++..     ++|+|||+||.... 
T Consensus         9 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~--~--~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~-   73 (315)
T 2ydy_A            9 GATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----P--K--FEQVNLLDSNAVHHIIHDF-----QPHVIVHCAAERRP-   73 (315)
T ss_dssp             TTTSHHHHHHHHHHHTTTCEEEEEC---------------------------CHHHHHHH-----CCSEEEECC------
T ss_pred             CCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----C--C--eEEecCCCHHHHHHHHHhh-----CCCEEEECCcccCh-
Confidence            899999999999999999999999987543     1  2  7789999999888888775     78999999997432 


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC----------CCCchhhhHhHHHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP----------GPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----------~~~~~~y~~sKaa~~~l~~  150 (162)
                         ..+.++++..+++|+.++..+++++.+    .+ +++|++||...+.+          ..+...|+.+|++.+.+++
T Consensus        74 ---~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~  145 (315)
T 2ydy_A           74 ---DVVENQPDAASQLNVDASGNLAKEAAA----VG-AFLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVL  145 (315)
T ss_dssp             -----------------CHHHHHHHHHHHH----HT-CEEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             ---hhhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence               234577889999999999999999865    22 49999999877654          3456789999999999999


Q ss_pred             HHHHH
Q 042185          151 TLRLE  155 (162)
Q Consensus       151 ~l~~e  155 (162)
                      .++.+
T Consensus       146 ~~~~~  150 (315)
T 2ydy_A          146 ENNLG  150 (315)
T ss_dssp             HHCTT
T ss_pred             HhCCC
Confidence            87544

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.77  E-value=1.4e-17  Score=122.63  Aligned_cols=141  Identities=16%  Similarity=0.171  Sum_probs=111.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh----hHHhhhcC------CceeEEEeccCChHHHHHHHHHHHHHcCCccEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA----TMADLEQD------PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVL   70 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~----~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~v   70 (162)
                      ||+|+||++++++|+++|++|++++|+..    ....+...      ..+.++.+|++|.+++..+++       .+|+|
T Consensus        32 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~V  104 (351)
T 3ruf_A           32 GVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK-------GVDHV  104 (351)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT-------TCSEE
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc-------CCCEE
Confidence            89999999999999999999999999643    22222222      578999999999988777665       68999


Q ss_pred             EECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCC-----------Cchhhh
Q 042185           71 VNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGP-----------WAGTYT  139 (162)
Q Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~~~~y~  139 (162)
                      ||+|+....    ..+.+++...+++|+.++..+++++.+    .+.+++|++||...+...+           +...|+
T Consensus       105 ih~A~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~  176 (351)
T 3ruf_A          105 LHQAALGSV----PRSIVDPITTNATNITGFLNILHAAKN----AQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYA  176 (351)
T ss_dssp             EECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHH
T ss_pred             EECCccCCc----chhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhH
Confidence            999996432    224456778899999999999988744    3456999999987664332           246799


Q ss_pred             HhHHHHHHHHHHHHHHh
Q 042185          140 ASKAALHSLTDTLRLEL  156 (162)
Q Consensus       140 ~sKaa~~~l~~~l~~e~  156 (162)
                      .+|.+.+.+++.++.+.
T Consensus       177 ~sK~~~E~~~~~~~~~~  193 (351)
T 3ruf_A          177 VTKYVNEIYAQVYARTY  193 (351)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHh
Confidence            99999999999988775

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.77  E-value=6e-18  Score=126.10  Aligned_cols=141  Identities=14%  Similarity=0.067  Sum_probs=110.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|+||++++++|+++|++|++++|+.+...... ...+.++.+|++|.++++.+++       .+|+|||+|+.....
T Consensus        36 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~Vih~A~~~~~~  107 (379)
T 2c5a_A           36 GAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-MFCDEFHLVDLRVMENCLKVTE-------GVDHVFNLAADMGGM  107 (379)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-GTCSEEEECCTTSHHHHHHHHT-------TCSEEEECCCCCCCH
T ss_pred             CCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc-cCCceEEECCCCCHHHHHHHhC-------CCCEEEECceecCcc
Confidence            89999999999999999999999999865433221 2467889999999988877763       689999999964321


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC------------------CCCCchhhhHhH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA------------------PGPWAGTYTASK  142 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~------------------~~~~~~~y~~sK  142 (162)
                      .   ...++++..+++|+.++..+++++.+    .+.++||++||...+.                  +..+...|+.+|
T Consensus       108 ~---~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK  180 (379)
T 2c5a_A          108 G---FIQSNHSVIMYNNTMISFNMIEAARI----NGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEK  180 (379)
T ss_dssp             H---HHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHH
T ss_pred             c---ccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHH
Confidence            1   11346788999999999999998743    3456999999976543                  223456899999


Q ss_pred             HHHHHHHHHHHHHh
Q 042185          143 AALHSLTDTLRLEL  156 (162)
Q Consensus       143 aa~~~l~~~l~~e~  156 (162)
                      .+.+.+++.++.+.
T Consensus       181 ~~~E~~~~~~~~~~  194 (379)
T 2c5a_A          181 LATEELCKHYNKDF  194 (379)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999988765

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.77  E-value=2.4e-18  Score=119.58  Aligned_cols=132  Identities=16%  Similarity=0.098  Sum_probs=104.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|+||++++++|+++|++|++++|+.+......  ..+.++.+|++|.++++++++       .+|+|||++|.....
T Consensus        11 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi~~a~~~~~~   81 (227)
T 3dhn_A           11 GASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN--EHLKVKKADVSSLDEVCEVCK-------GADAVISAFNPGWNN   81 (227)
T ss_dssp             TCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC--TTEEEECCCTTCHHHHHHHHT-------TCSEEEECCCC----
T ss_pred             cCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc--CceEEEEecCCCHHHHHHHhc-------CCCEEEEeCcCCCCC
Confidence            89999999999999999999999999987654432  578899999999998887765       579999999864211


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC----------CCchhhhHhHHHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG----------PWAGTYTASKAALHSLTD  150 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~~~~~y~~sKaa~~~l~~  150 (162)
                                ...+++|+.++..+++++.+    .+.+++|++||...+.+.          .+...|+.+|.+.+.+++
T Consensus        82 ----------~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~  147 (227)
T 3dhn_A           82 ----------PDIYDETIKVYLTIIDGVKK----AGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLN  147 (227)
T ss_dssp             ------------CCSHHHHHHHHHHHHHHH----TTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHHHHHH
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHH----hCCCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHHHHHH
Confidence                      12678899998888887643    445699999998765433          236789999999999988


Q ss_pred             HHHHH
Q 042185          151 TLRLE  155 (162)
Q Consensus       151 ~l~~e  155 (162)
                      .++.+
T Consensus       148 ~~~~~  152 (227)
T 3dhn_A          148 FLMKE  152 (227)
T ss_dssp             TGGGC
T ss_pred             HHhhc
Confidence            87754

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.77  E-value=2.4e-17  Score=121.20  Aligned_cols=143  Identities=17%  Similarity=0.243  Sum_probs=108.6

Q ss_pred             CCCCchHHHHHHHHHHCC--CeEEEEecChh-----hHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASD--CRVVATGRSKA-----TMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g--~~vi~~~r~~~-----~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+|+||.+++++|+++|  ++|+..+|...     .++.......+.++.+|++|.++++.+++..     ++|+|||+
T Consensus        31 GatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~  105 (346)
T 4egb_A           31 GGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER-----DVQVIVNF  105 (346)
T ss_dssp             TTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----TCCEEEEC
T ss_pred             CCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc-----CCCEEEEC
Confidence            899999999999999999  67888877531     2222223368899999999999999998875     78999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC------------CCchhhhHh
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG------------PWAGTYTAS  141 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------------~~~~~y~~s  141 (162)
                      |+.....    ...++++..+++|+.++..+++++.+    .+.+++|++||...+...            .+...|+.+
T Consensus       106 A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~s  177 (346)
T 4egb_A          106 AAESHVD----RSIENPIPFYDTNVIGTVTLLELVKK----YPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSS  177 (346)
T ss_dssp             CCCC-------------CHHHHHHTHHHHHHHHHHHH----STTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHH
T ss_pred             Ccccchh----hhhhCHHHHHHHHHHHHHHHHHHHHh----cCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHH
Confidence            9975332    24567788999999999999988744    345789999998665433            124679999


Q ss_pred             HHHHHHHHHHHHHHh
Q 042185          142 KAALHSLTDTLRLEL  156 (162)
Q Consensus       142 Kaa~~~l~~~l~~e~  156 (162)
                      |.+.+.+++.++.+.
T Consensus       178 K~~~E~~~~~~~~~~  192 (346)
T 4egb_A          178 KASADMIALAYYKTY  192 (346)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999988775

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.77  E-value=2.3e-17  Score=121.29  Aligned_cols=132  Identities=14%  Similarity=0.064  Sum_probs=108.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|+||.+++++|+++|++|++++|+.+.       ..+.++.+|++|.+++..+++       .+|+|||+|+.... 
T Consensus        26 GatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~~~-   90 (347)
T 4id9_A           26 GSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSDAIM-------GVSAVLHLGAFMSW-   90 (347)
T ss_dssp             TTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCTTCHHHHHHHHT-------TCSEEEECCCCCCS-
T ss_pred             CCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCcCCHHHHHHHHh-------CCCEEEECCcccCc-
Confidence            899999999999999999999999998654       467889999999988877664       68999999996432 


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC-------------CCCchhhhHhHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP-------------GPWAGTYTASKAALHS  147 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-------------~~~~~~y~~sKaa~~~  147 (162)
                           +...++..+++|+.++..+++++.+    .+.++||++||...+..             ..+...|+.+|.+.+.
T Consensus        91 -----~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~  161 (347)
T 4id9_A           91 -----APADRDRMFAVNVEGTRRLLDAASA----AGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEE  161 (347)
T ss_dssp             -----SGGGHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             -----chhhHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHH
Confidence                 3445689999999999999988744    45579999999765432             2456689999999999


Q ss_pred             HHHHHHHHh
Q 042185          148 LTDTLRLEL  156 (162)
Q Consensus       148 l~~~l~~e~  156 (162)
                      +++.++.+.
T Consensus       162 ~~~~~~~~~  170 (347)
T 4id9_A          162 LVRFHQRSG  170 (347)
T ss_dssp             HHHHHHHHS
T ss_pred             HHHHHHHhc
Confidence            999988764

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.76  E-value=3.5e-17  Score=120.03  Aligned_cols=140  Identities=16%  Similarity=0.134  Sum_probs=108.6

Q ss_pred             CCCCchHHHHHHHHHHC-CCeEEEEecChhhHHhhhcCCceeEEEeccCCh-HHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAAS-DCRVVATGRSKATMADLEQDPRFFVQELDVLSE-QSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||+|+||++++++|+++ |++|++++|+.+..+.......+.++.+|+++. +.++.+++       .+|+|||+||...
T Consensus         7 GatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------~~d~vih~A~~~~   79 (345)
T 2bll_A            7 GVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK-------KCDVVLPLVAIAT   79 (345)
T ss_dssp             TCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH-------HCSEEEECBCCCC
T ss_pred             CCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhcc-------CCCEEEEcccccC
Confidence            89999999999999998 899999999987766555556788999999984 45666554       4699999999643


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCC------------------CchhhhH
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGP------------------WAGTYTA  140 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------------~~~~y~~  140 (162)
                      ..    ...++++..+++|+.++..+++++.+    .+ +++|++||...+...+                  +...|+.
T Consensus        80 ~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~  150 (345)
T 2bll_A           80 PI----EYTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSV  150 (345)
T ss_dssp             HH----HHHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHH
T ss_pred             cc----chhcCHHHHHHHHHHHHHHHHHHHHH----hC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHH
Confidence            21    11345678899999999998888744    33 7999999976543211                  1237999


Q ss_pred             hHHHHHHHHHHHHHHh
Q 042185          141 SKAALHSLTDTLRLEL  156 (162)
Q Consensus       141 sKaa~~~l~~~l~~e~  156 (162)
                      +|.+.+.+++.++.+.
T Consensus       151 sK~~~e~~~~~~~~~~  166 (345)
T 2bll_A          151 SKQLLDRVIWAYGEKE  166 (345)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhc
Confidence            9999999999988764

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.76  E-value=9.4e-18  Score=123.38  Aligned_cols=139  Identities=17%  Similarity=0.165  Sum_probs=108.4

Q ss_pred             CCCCchHHHHHHHHHHC--CCeEEEEecChh-----hHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAAS--DCRVVATGRSKA-----TMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~--g~~vi~~~r~~~-----~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+|+||++++++|+++  |++|++++|+..     .+.+. ....+.++.+|++|.++++.+++.       .|+|||+
T Consensus        11 GatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~-------~d~vih~   82 (348)
T 1oc2_A           11 GGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI-LGDRVELVVGDIADAELVDKLAAK-------ADAIVHY   82 (348)
T ss_dssp             TTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG-CSSSEEEEECCTTCHHHHHHHHTT-------CSEEEEC
T ss_pred             CCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh-ccCCeEEEECCCCCHHHHHHHhhc-------CCEEEEC
Confidence            89999999999999998  899999999642     12111 125788999999999887777643       4999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC-----------------------
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA-----------------------  130 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------------------  130 (162)
                      ||....    +.+.++++..+++|+.++..+++++.+.    + ++||++||...+.                       
T Consensus        83 A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~  153 (348)
T 1oc2_A           83 AAESHN----DNSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAET  153 (348)
T ss_dssp             CSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTS
T ss_pred             CcccCc----cchhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccceeCCCcccccccccccccCCCcCCCC
Confidence            996431    1234567789999999999999998763    3 4999999976442                       


Q ss_pred             CCCCchhhhHhHHHHHHHHHHHHHHh
Q 042185          131 PGPWAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus       131 ~~~~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                      +.++...|+.+|++.+.+++.++.++
T Consensus       154 ~~~~~~~Y~~sK~~~e~~~~~~~~~~  179 (348)
T 1oc2_A          154 NYNPSSPYSSTKAASDLIVKAWVRSF  179 (348)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHh
Confidence            22345689999999999999998776

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.75  E-value=1.1e-17  Score=121.51  Aligned_cols=136  Identities=18%  Similarity=0.226  Sum_probs=108.9

Q ss_pred             CCCCchHHHHHHHHHHC--CCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAAS--DCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||+|+||++++++|+++  |++|++++|+.+...      .+.++.+|++|.+++.+++++.     ++|+|||+|+...
T Consensus         6 GatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~------~~~~~~~D~~d~~~~~~~~~~~-----~~d~vih~a~~~~   74 (317)
T 3ajr_A            6 GSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG------GIKFITLDVSNRDEIDRAVEKY-----SIDAIFHLAGILS   74 (317)
T ss_dssp             STTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT------TCCEEECCTTCHHHHHHHHHHT-----TCCEEEECCCCCH
T ss_pred             cCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc------CceEEEecCCCHHHHHHHHhhc-----CCcEEEECCcccC
Confidence            89999999999999998  889999998754321      4678899999999988887653     7999999999642


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC------------CCchhhhHhHHHHH
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG------------PWAGTYTASKAALH  146 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------------~~~~~y~~sKaa~~  146 (162)
                      .     ...++++..+++|+.++..+++++.+    .+.+++|++||...+.+.            .+...|+.+|.+.+
T Consensus        75 ~-----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e  145 (317)
T 3ajr_A           75 A-----KGEKDPALAYKVNMNGTYNILEAAKQ----HRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAE  145 (317)
T ss_dssp             H-----HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHH
T ss_pred             C-----ccccChHHHhhhhhHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHH
Confidence            1     12356788999999999999998754    345699999998766432            13568999999999


Q ss_pred             HHHHHHHHHh
Q 042185          147 SLTDTLRLEL  156 (162)
Q Consensus       147 ~l~~~l~~e~  156 (162)
                      .+++.++.+.
T Consensus       146 ~~~~~~~~~~  155 (317)
T 3ajr_A          146 LLGQYYYEKF  155 (317)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHhc
Confidence            9999887664

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.75  E-value=1.5e-17  Score=123.75  Aligned_cols=141  Identities=11%  Similarity=0.070  Sum_probs=107.8

Q ss_pred             CCCCchHHHHHHHHHHCC-CeEEEEecChhhHHh-hhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASD-CRVVATGRSKATMAD-LEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g-~~vi~~~r~~~~~~~-~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||+|+||++++++|+++| ++|++++|+.+...+ +.....+.++.+|++|.++++++++       ++|+|||+|+...
T Consensus        39 GatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~Vih~A~~~~  111 (377)
T 2q1s_A           39 GGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQD-------EYDYVFHLATYHG  111 (377)
T ss_dssp             TTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCS-------CCSEEEECCCCSC
T ss_pred             CCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhh-------CCCEEEECCCccC
Confidence            899999999999999999 999999998654322 2124568899999999887766543       7899999999643


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-CCCeEEEeccccccC----------------CC-CCchhhhH
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKIINVGSVTVAA----------------PG-PWAGTYTA  140 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~----------------~~-~~~~~y~~  140 (162)
                      .    ..+.++++..+++|+.++..+++++.+    . +.++||++||...+.                +. .+...|+.
T Consensus       112 ~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~  183 (377)
T 2q1s_A          112 N----QSSIHDPLADHENNTLTTLKLYERLKH----FKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSM  183 (377)
T ss_dssp             H----HHHHHCHHHHHHHHTHHHHHHHHHHTT----CSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHH
T ss_pred             c----hhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHH
Confidence            2    123456788999999999999988733    3 456999999976431                22 34568999


Q ss_pred             hHHHHHHHHHHHHHHh
Q 042185          141 SKAALHSLTDTLRLEL  156 (162)
Q Consensus       141 sKaa~~~l~~~l~~e~  156 (162)
                      +|.+.+.+++.++.++
T Consensus       184 sK~~~E~~~~~~~~~~  199 (377)
T 2q1s_A          184 SKIFGEFYSVYYHKQH  199 (377)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999988765

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.75  E-value=3.5e-17  Score=119.93  Aligned_cols=140  Identities=14%  Similarity=0.108  Sum_probs=104.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHH---hhhc----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMA---DLEQ----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~---~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+|+||++++++|+++|++|+++.|+.+...   .+.+    ...+.++.+|++|.++++.+++       .+|+|||+
T Consensus        12 GatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~Vih~   84 (337)
T 2c29_D           12 GASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK-------GCTGVFHV   84 (337)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT-------TCSEEEEC
T ss_pred             CCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc-------CCCEEEEe
Confidence            89999999999999999999999999865322   2111    1257789999999988877654       47999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCC--------------------
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGP--------------------  133 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------------------  133 (162)
                      |+...   ..  ..+..+..+++|+.++..+++++.+..   ..++||++||..++.+.+                    
T Consensus        85 A~~~~---~~--~~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~  156 (337)
T 2c29_D           85 ATPMD---FE--SKDPENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAK  156 (337)
T ss_dssp             CCCCC---SS--CSSHHHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHH
T ss_pred             ccccC---CC--CCChHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhhcccCCCCCcccCcccCCchhhhccc
Confidence            98531   11  123345788999999999999886532   247999999987544211                    


Q ss_pred             --CchhhhHhHHHHHHHHHHHHHH
Q 042185          134 --WAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus       134 --~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                        +...|+.+|.+.+.+++.++.+
T Consensus       157 ~~~~~~Y~~sK~~~E~~~~~~~~~  180 (337)
T 2c29_D          157 KMTAWMYFVSKTLAEQAAWKYAKE  180 (337)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCccchHHHHHHHHHHHHHHHHHH
Confidence              2236999999999998877654

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.74  E-value=2e-17  Score=122.76  Aligned_cols=139  Identities=17%  Similarity=0.196  Sum_probs=112.2

Q ss_pred             CCCCchHHHHHHHHHHC-CCeEEEEecChhhHHhhhcCCceeEEEeccC-ChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAAS-DCRVVATGRSKATMADLEQDPRFFVQELDVL-SEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~-~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||+|+||.+++++|+++ |++|++++|+.+..........+.++.+|++ +.++++.+++       .+|+|||+|+...
T Consensus        31 GatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~-------~~d~Vih~A~~~~  103 (372)
T 3slg_A           31 GVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVK-------KCDVILPLVAIAT  103 (372)
T ss_dssp             SCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHH-------HCSEEEECBCCCC
T ss_pred             CCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhc-------cCCEEEEcCcccc
Confidence            89999999999999998 9999999999887777666678999999999 8888888776       4799999999753


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC------------------CCchhhhH
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG------------------PWAGTYTA  140 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------------------~~~~~y~~  140 (162)
                      ..    ...++.+..+++|+.++..+++++..    .+ .++|++||...+...                  .+...|+.
T Consensus       104 ~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~  174 (372)
T 3slg_A          104 PA----TYVKQPLRVFELDFEANLPIVRSAVK----YG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYAC  174 (372)
T ss_dssp             HH----HHHHCHHHHHHHHTTTTHHHHHHHHH----HT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHH
T ss_pred             HH----HHhhCHHHHHHHHHHHHHHHHHHHHH----hC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHH
Confidence            21    12345678889999999998888744    34 799999997554321                  23337999


Q ss_pred             hHHHHHHHHHHHHHH
Q 042185          141 SKAALHSLTDTLRLE  155 (162)
Q Consensus       141 sKaa~~~l~~~l~~e  155 (162)
                      +|.+.+.+++.++.+
T Consensus       175 sK~~~E~~~~~~~~~  189 (372)
T 3slg_A          175 SKQLMDRVIWGYGME  189 (372)
T ss_dssp             HHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHC
Confidence            999999999998765

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.74  E-value=1.6e-17  Score=118.22  Aligned_cols=127  Identities=17%  Similarity=0.164  Sum_probs=103.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|+||++++++|+ +|++|++++|+.+. +   .  .   +.+|++|.++++++++..     ++|+||||||.... 
T Consensus         7 GatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~---~--~---~~~Dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~~-   70 (273)
T 2ggs_A            7 GASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q---G--G---YKLDLTDFPRLEDFIIKK-----RPDVIINAAAMTDV-   70 (273)
T ss_dssp             TTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T---T--C---EECCTTSHHHHHHHHHHH-----CCSEEEECCCCCCH-
T ss_pred             CCCChhHHHHHHHHh-cCCeEEEecCCCcC-C---C--C---ceeccCCHHHHHHHHHhc-----CCCEEEECCcccCh-
Confidence            899999999999999 58999999998742 1   1  1   789999999999988876     79999999996432 


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCC----------CchhhhHhHHHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGP----------WAGTYTASKAALHSLTD  150 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~~y~~sKaa~~~l~~  150 (162)
                         +.+.++++..+++|+.++..+++++.+    . ++++|++||..++.+.+          +...|+.+|++.+.+++
T Consensus        71 ---~~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~  142 (273)
T 2ggs_A           71 ---DKCEIEKEKAYKINAEAVRHIVRAGKV----I-DSYIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFAL  142 (273)
T ss_dssp             ---HHHHHCHHHHHHHHTHHHHHHHHHHHH----T-TCEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHHHHHHHHC
T ss_pred             ---hhhhhCHHHHHHHhHHHHHHHHHHHHH----h-CCeEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHHHHHHHHh
Confidence               123467889999999999999999854    2 35999999988765432          25689999999999887


Q ss_pred             H
Q 042185          151 T  151 (162)
Q Consensus       151 ~  151 (162)
                      .
T Consensus       143 ~  143 (273)
T 2ggs_A          143 Q  143 (273)
T ss_dssp             C
T ss_pred             C
Confidence            5

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.74  E-value=1.2e-16  Score=109.18  Aligned_cols=128  Identities=14%  Similarity=0.078  Sum_probs=99.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|+||++++++|+++|++|++++|+.+...... ...+.++.+|++|.++++++++       .+|++||++|.....
T Consensus        10 GatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a~~~~~~   81 (206)
T 1hdo_A           10 GATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-PRPAHVVVGDVLQAADVDKTVA-------GQDAVIVLLGTRNDL   81 (206)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-CCCSEEEESCTTSHHHHHHHHT-------TCSEEEECCCCTTCC
T ss_pred             cCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc-CCceEEEEecCCCHHHHHHHHc-------CCCEEEECccCCCCC
Confidence            89999999999999999999999999987654321 3568899999999988877654       479999999975331


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCC----CchhhhHhHHHHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGP----WAGTYTASKAALHSLTDT  151 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~----~~~~y~~sKaa~~~l~~~  151 (162)
                         +.        .++|+.++..+++++.    +.+.+++|++||...+...+    ....|+.+|.+++.+++.
T Consensus        82 ---~~--------~~~n~~~~~~~~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~  141 (206)
T 1hdo_A           82 ---SP--------TTVMSEGARNIVAAMK----AHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRE  141 (206)
T ss_dssp             ---SC--------CCHHHHHHHHHHHHHH----HHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHHH
T ss_pred             ---Cc--------cchHHHHHHHHHHHHH----HhCCCeEEEEeeeeeccCcccccccchhHHHHHHHHHHHHHh
Confidence               11        1367777777777654    34557999999987665544    567899999999998853

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.74  E-value=1.7e-17  Score=120.22  Aligned_cols=139  Identities=16%  Similarity=0.120  Sum_probs=110.0

Q ss_pred             CCCCchHHHHHHHHHHC--CCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAAS--DCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||+|+||++++++|+++  |++|++++|+.+... ..  ..+.++.+|++|.+++++++++.     ++|+|||+|+...
T Consensus         9 GatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~--~~~~~~~~D~~d~~~~~~~~~~~-----~~d~vih~a~~~~   80 (312)
T 2yy7_A            9 GACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV--NSGPFEVVNALDFNQIEHLVEVH-----KITDIYLMAALLS   80 (312)
T ss_dssp             TTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH--HSSCEEECCTTCHHHHHHHHHHT-----TCCEEEECCCCCH
T ss_pred             CCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc--CCCceEEecCCCHHHHHHHHhhc-----CCCEEEECCccCC
Confidence            89999999999999998  899999999765422 11  24678899999999988887754     7899999999642


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC------------CCchhhhHhHHHHH
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG------------PWAGTYTASKAALH  146 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------------~~~~~y~~sKaa~~  146 (162)
                      .     ...++++..+++|+.++..+++++.+    .+.+++|++||...+.+.            .+...|+.+|.+.+
T Consensus        81 ~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e  151 (312)
T 2yy7_A           81 A-----TAEKNPAFAWDLNMNSLFHVLNLAKA----KKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGE  151 (312)
T ss_dssp             H-----HHHHCHHHHHHHHHHHHHHHHHHHHT----TSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHH
T ss_pred             C-----chhhChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHH
Confidence            2     12356788899999999999988744    345699999998765432            23567999999999


Q ss_pred             HHHHHHHHHh
Q 042185          147 SLTDTLRLEL  156 (162)
Q Consensus       147 ~l~~~l~~e~  156 (162)
                      .+++.++.++
T Consensus       152 ~~~~~~~~~~  161 (312)
T 2yy7_A          152 RWCEYYHNIY  161 (312)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHhc
Confidence            9999988765

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.74  E-value=1.9e-17  Score=122.26  Aligned_cols=141  Identities=11%  Similarity=0.113  Sum_probs=107.7

Q ss_pred             CCCCchHHHHHHHHHHCC-CeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASD-CRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g-~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      ||+|+||++++++|+++| ++|++++|+.+... ...-..+. +.+|+++.+.++.+++.  ..++++|+|||+|+....
T Consensus        53 GatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~-~~~d~~~~~~~~~~~~~--~~~~~~d~Vih~A~~~~~  128 (357)
T 2x6t_A           53 GGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVNLVDLN-IADYMDKEDFLIQIMAG--EEFGDVEAIFHEGACSST  128 (357)
T ss_dssp             TTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-GGGTTTSC-CSEEEEHHHHHHHHHTT--CCCSSCCEEEECCSCCCT
T ss_pred             CCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-hhcccCce-EeeecCcHHHHHHHHhh--cccCCCCEEEECCcccCC
Confidence            899999999999999999 89999999765421 11111222 67899998888777653  135689999999997433


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCC-----------CchhhhHhHHHHHHH
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGP-----------WAGTYTASKAALHSL  148 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~~~~y~~sKaa~~~l  148 (162)
                            +.++++..+++|+.++..+++++.+    .+. +||++||...+.+.+           +...|+.+|.+.+.+
T Consensus       129 ------~~~~~~~~~~~n~~~~~~ll~a~~~----~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~  197 (357)
T 2x6t_A          129 ------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEY  197 (357)
T ss_dssp             ------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHHHH
T ss_pred             ------ccCCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHHHH
Confidence                  2345788999999999999999865    334 999999987654332           256899999999999


Q ss_pred             HHHHHHHh
Q 042185          149 TDTLRLEL  156 (162)
Q Consensus       149 ~~~l~~e~  156 (162)
                      ++.++.++
T Consensus       198 ~~~~~~~~  205 (357)
T 2x6t_A          198 VRQILPEA  205 (357)
T ss_dssp             HHHHGGGC
T ss_pred             HHHHHHHc
Confidence            99988764

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.73  E-value=2.9e-17  Score=118.10  Aligned_cols=124  Identities=18%  Similarity=0.290  Sum_probs=102.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|+||++++++|+++|++|++++|+                .+|++|.++++.++++.     ++|+|||+||.... 
T Consensus        19 GatG~iG~~l~~~L~~~g~~V~~~~r~----------------~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~-   76 (292)
T 1vl0_A           19 GANGQLGREIQKQLKGKNVEVIPTDVQ----------------DLDITNVLAVNKFFNEK-----KPNVVINCAAHTAV-   76 (292)
T ss_dssp             STTSHHHHHHHHHHTTSSEEEEEECTT----------------TCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCH-
T ss_pred             CCCChHHHHHHHHHHhCCCeEEeccCc----------------cCCCCCHHHHHHHHHhc-----CCCEEEECCccCCH-
Confidence            899999999999999999999999996                27999999998888765     78999999996432 


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCC-----------CchhhhHhHHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGP-----------WAGTYTASKAALHSLT  149 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~~~~y~~sKaa~~~l~  149 (162)
                         +.+.++++..+++|+.++..+++++.+    .+. ++|++||...+.+.+           +...|+.+|.+.+.++
T Consensus        77 ---~~~~~~~~~~~~~nv~~~~~l~~a~~~----~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~  148 (292)
T 1vl0_A           77 ---DKCEEQYDLAYKINAIGPKNLAAAAYS----VGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFV  148 (292)
T ss_dssp             ---HHHHHCHHHHHHHHTHHHHHHHHHHHH----HTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             ---HHHhcCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHH
Confidence               123467889999999999999999765    233 999999987654322           3568999999999999


Q ss_pred             HHHHH
Q 042185          150 DTLRL  154 (162)
Q Consensus       150 ~~l~~  154 (162)
                      +.++.
T Consensus       149 ~~~~~  153 (292)
T 1vl0_A          149 KALNP  153 (292)
T ss_dssp             HHHCS
T ss_pred             HhhCC
Confidence            88754

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.73  E-value=1.7e-16  Score=109.90  Aligned_cols=122  Identities=12%  Similarity=0.004  Sum_probs=93.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|+||++++++|+++|++|++++|+.+...++.. ..+.++.+|++|.++         +.+..+|+|||++|.....
T Consensus         7 GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~D~~d~~~---------~~~~~~d~vi~~ag~~~~~   76 (224)
T 3h2s_A            7 GATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLG-ATVATLVKEPLVLTE---------ADLDSVDAVVDALSVPWGS   76 (224)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTC-TTSEEEECCGGGCCH---------HHHTTCSEEEECCCCCTTS
T ss_pred             cCCCHHHHHHHHHHHHCCCEEEEEEecccccccccC-CCceEEecccccccH---------hhcccCCEEEECCccCCCc
Confidence            899999999999999999999999999887765533 578899999999886         2346889999999975211


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCC--------------chhhhHhHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPW--------------AGTYTASKAALH  146 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~~~y~~sKaa~~  146 (162)
                      .           ...+|+.++    +.+++.+++.+ +++|++||..+..+.+.              ...|+.+|++.+
T Consensus        77 ~-----------~~~~n~~~~----~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e  140 (224)
T 3h2s_A           77 G-----------RGYLHLDFA----THLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYY  140 (224)
T ss_dssp             S-----------CTHHHHHHH----HHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHH
T ss_pred             c-----------hhhHHHHHH----HHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHH
Confidence            1           123466655    44555566566 89999999876654433              567999999988


Q ss_pred             HH
Q 042185          147 SL  148 (162)
Q Consensus       147 ~l  148 (162)
                      .+
T Consensus       141 ~~  142 (224)
T 3h2s_A          141 EY  142 (224)
T ss_dssp             HH
T ss_pred             HH
Confidence            55

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.72  E-value=1.4e-16  Score=109.95  Aligned_cols=120  Identities=13%  Similarity=0.181  Sum_probs=89.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|+||++++++|+++|++|++++|+.+....+.  ..+.++.+|++|.++         +.+..+|+|||++|.... 
T Consensus         7 GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~---------~~~~~~d~vi~~ag~~~~-   74 (221)
T 3ew7_A            7 GATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDLTL---------SDLSDQNVVVDAYGISPD-   74 (221)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGCCH---------HHHTTCSEEEECCCSSTT-
T ss_pred             cCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccChhh---------hhhcCCCEEEECCcCCcc-
Confidence            89999999999999999999999999988777664  578899999999886         233578999999997321 


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCC------------CchhhhHhHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGP------------WAGTYTASKAALHSL  148 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------~~~~y~~sKaa~~~l  148 (162)
                                  ....|+.+    ++.+++.+++.+.+++|++||..++.+.+            +...|+.+|.+.+.+
T Consensus        75 ------------~~~~~~~~----~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~  138 (221)
T 3ew7_A           75 ------------EAEKHVTS----LDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQL  138 (221)
T ss_dssp             ------------TTTSHHHH----HHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHH
T ss_pred             ------------ccchHHHH----HHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHH
Confidence                        12334444    45555556666678999999987765433            244599999999887

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.71  E-value=4.9e-17  Score=122.91  Aligned_cols=134  Identities=16%  Similarity=0.095  Sum_probs=100.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhh---HHhhh--------------cCCceeEEEeccCChHHHHHHHHHHHHH
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKAT---MADLE--------------QDPRFFVQELDVLSEQSVQNVLSNVLEK   63 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~---~~~~~--------------~~~~~~~~~~D~~~~~~i~~~~~~~~~~   63 (162)
                      ||+|+||++++++|+++|++|++++|+.+.   .+.+.              ...++.++.+|+++.+++.        .
T Consensus        76 GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--------~  147 (427)
T 4f6c_A           76 GATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--------L  147 (427)
T ss_dssp             CTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC--------C
T ss_pred             cCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC--------C
Confidence            899999999999999999999999998762   11111              1257899999999988777        4


Q ss_pred             cCCccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccc---------------
Q 042185           64 FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTV---------------  128 (162)
Q Consensus        64 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~---------------  128 (162)
                      .+++|+|||||+...       ..++++..+++|+.++..+++++.+     +..+||++||...               
T Consensus       148 ~~~~d~Vih~A~~~~-------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~~G~~~~~~~~~~~~~E  215 (427)
T 4f6c_A          148 PENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTYFDIDTEDVTFSE  215 (427)
T ss_dssp             SSCCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEGGGGSEECSSCSCCEECT
T ss_pred             cCCCCEEEECCcccC-------CCCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEECchHhCCCccCCCCCccccc
Confidence            579999999999753       2356788999999999999999865     3579999999876               


Q ss_pred             ---cCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185          129 ---AAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus       129 ---~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                         ..+..+...|+.+|.+.+.+++.++.
T Consensus       216 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~  244 (427)
T 4f6c_A          216 ADVYKGQLLTSPYTRSKFYSELKVLEAVN  244 (427)
T ss_dssp             TCSCSSCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCCCCCCchHHHHHHHHHHHHHHHH
Confidence               01122567899999999999998754

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.71  E-value=1.4e-16  Score=115.89  Aligned_cols=139  Identities=14%  Similarity=0.139  Sum_probs=98.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEec-Chhh---HHhhhc----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGR-SKAT---MADLEQ----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r-~~~~---~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      ||+|+||++++++|+++|++|++++| +.+.   ...+..    ...+.++.+|++|.++++.+++       .+|+|||
T Consensus         8 GatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vih   80 (322)
T 2p4h_X            8 GGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIE-------GCVGIFH   80 (322)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHT-------TCSEEEE
T ss_pred             CChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHc-------CCCEEEE
Confidence            89999999999999999999999988 6432   111111    1246788899999998887764       4699999


Q ss_pred             CCCCCCCCCCCCCCh-HHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCC------------------
Q 042185           73 NAGVQCVGPLAEVPL-SAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGP------------------  133 (162)
Q Consensus        73 ~ag~~~~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------------  133 (162)
                      +|+..   .   .+. +.++..+++|+.++..+++++.+.   .+.++||++||..+..+.+                  
T Consensus        81 ~A~~~---~---~~~~~~~~~~~~~nv~gt~~l~~aa~~~---~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  151 (322)
T 2p4h_X           81 TASPI---D---FAVSEPEEIVTKRTVDGALGILKACVNS---KTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLR  151 (322)
T ss_dssp             CCCCC--------------CHHHHHHHHHHHHHHHHHTTC---SSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHH
T ss_pred             cCCcc---c---CCCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccHHHcccCCCCCeecCCccccchhhhc
Confidence            99632   1   122 224568999999999999998653   1357999999987543221                  


Q ss_pred             ----CchhhhHhHHHHHHHHHHHHHH
Q 042185          134 ----WAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus       134 ----~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                          ....|+.+|.+.+.+++.++.+
T Consensus       152 ~~~p~~~~Y~~sK~~~e~~~~~~~~~  177 (322)
T 2p4h_X          152 SVKPFGWNYAVSKTLAEKAVLEFGEQ  177 (322)
T ss_dssp             HHCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCcccccHHHHHHHHHHHHHHHHHh
Confidence                0116999999888877766543

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.70  E-value=2.1e-16  Score=126.03  Aligned_cols=143  Identities=20%  Similarity=0.256  Sum_probs=108.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhh----HHhhh--cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKAT----MADLE--QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~----~~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+|+||++++++|+++|++|++++|+.+.    .+++.  ....+.++.+|+++.+++++++++.     ++|+|||+|
T Consensus        18 GatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-----~~D~Vih~A   92 (699)
T 1z45_A           18 GGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----KIDSVIHFA   92 (699)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----CCCEEEECC
T ss_pred             CCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC-----CCCEEEECC
Confidence            899999999999999999999999986532    11111  2356788999999999988887653     799999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC---------------CCCchhhh
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP---------------GPWAGTYT  139 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---------------~~~~~~y~  139 (162)
                      |......    ..+..+..+++|+.++..+++++.    +.+.++||++||...+..               ..+...|+
T Consensus        93 ~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~  164 (699)
T 1z45_A           93 GLKAVGE----STQIPLRYYHNNILGTVVLLELMQ----QYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYG  164 (699)
T ss_dssp             SCCCHHH----HHHSHHHHHHHHHHHHHHHHHHHH----HHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHH
T ss_pred             cccCcCc----cccCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHH
Confidence            9743211    123345688999999999887653    345579999999765421               12346899


Q ss_pred             HhHHHHHHHHHHHHHHh
Q 042185          140 ASKAALHSLTDTLRLEL  156 (162)
Q Consensus       140 ~sKaa~~~l~~~l~~e~  156 (162)
                      .+|++++.+++.++.+.
T Consensus       165 ~sK~~~E~~~~~~~~~~  181 (699)
T 1z45_A          165 HTKYAIENILNDLYNSD  181 (699)
T ss_dssp             HHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHhc
Confidence            99999999999988763

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.70  E-value=2.4e-16  Score=114.41  Aligned_cols=131  Identities=15%  Similarity=0.143  Sum_probs=102.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|+||++++++|+++|++|++++|+..... +.   .+.++.+|++ .+++.++++       ++|+|||+|+.....
T Consensus         9 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~---~~~~~~~Dl~-~~~~~~~~~-------~~d~Vih~a~~~~~~   76 (311)
T 3m2p_A            9 GGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN---DYEYRVSDYT-LEDLINQLN-------DVDAVVHLAATRGSQ   76 (311)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCCC---------CCEEEECCCC-HHHHHHHTT-------TCSEEEECCCCCCSS
T ss_pred             CCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC---ceEEEEcccc-HHHHHHhhc-------CCCEEEEccccCCCC
Confidence            89999999999999999999999999844333 32   7889999999 877776654       789999999975432


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC-----------CCCchhhhHhHHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP-----------GPWAGTYTASKAALHSLT  149 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~y~~sKaa~~~l~  149 (162)
                              +++..+++|+.++..+++++..    .+..++|++||...+..           ..+...|+.+|.+.+.++
T Consensus        77 --------~~~~~~~~n~~~~~~ll~a~~~----~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  144 (311)
T 3m2p_A           77 --------GKISEFHDNEILTQNLYDACYE----NNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIG  144 (311)
T ss_dssp             --------SCGGGTHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHH
T ss_pred             --------ChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHH
Confidence                    3455778899999888888743    44568999999765532           123468999999999999


Q ss_pred             HHHHHH
Q 042185          150 DTLRLE  155 (162)
Q Consensus       150 ~~l~~e  155 (162)
                      +.++.+
T Consensus       145 ~~~~~~  150 (311)
T 3m2p_A          145 NIYSRK  150 (311)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998875

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.69  E-value=1.2e-16  Score=115.55  Aligned_cols=139  Identities=13%  Similarity=0.133  Sum_probs=104.2

Q ss_pred             CCCCchHHHHHHHHHHCC-CeEEEEecChhhH--HhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFAASD-CRVVATGRSKATM--ADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g-~~vi~~~r~~~~~--~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      ||+|+||++++++|+++| ++|++++|+.+..  .... +  +. +.+|+++.+.++.+++...  ++++|+|||+|+..
T Consensus         6 GatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~--~~-~~~d~~~~~~~~~~~~~~~--~~~~d~vi~~a~~~   79 (310)
T 1eq2_A            6 GGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV-D--LN-IADYMDKEDFLIQIMAGEE--FGDVEAIFHEGACS   79 (310)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH-T--SC-CSEEEEHHHHHHHHHTTCC--CSSCCEEEECCSCC
T ss_pred             cCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcC-c--ce-eccccccHHHHHHHHhccc--cCCCcEEEECcccc
Confidence            899999999999999999 8999999876532  2221 1  22 6789988877776654210  23699999999964


Q ss_pred             CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCC-----------CchhhhHhHHHHH
Q 042185           78 CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGP-----------WAGTYTASKAALH  146 (162)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~~~~y~~sKaa~~  146 (162)
                      ..      +.++++..+++|+.++..+++++.+    .+. ++|++||...+.+.+           +...|+.+|.+.+
T Consensus        80 ~~------~~~~~~~~~~~n~~~~~~l~~a~~~----~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e  148 (310)
T 1eq2_A           80 ST------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFD  148 (310)
T ss_dssp             CT------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHH
T ss_pred             cC------cccCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHH
Confidence            32      2345688899999999999998754    344 999999986653322           2557999999999


Q ss_pred             HHHHHHHHHh
Q 042185          147 SLTDTLRLEL  156 (162)
Q Consensus       147 ~l~~~l~~e~  156 (162)
                      .+++.++.+.
T Consensus       149 ~~~~~~~~~~  158 (310)
T 1eq2_A          149 EYVRQILPEA  158 (310)
T ss_dssp             HHHHHHGGGC
T ss_pred             HHHHHHHHHc
Confidence            9999987653

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.69  E-value=7.2e-16  Score=122.32  Aligned_cols=140  Identities=16%  Similarity=0.136  Sum_probs=108.7

Q ss_pred             CCCCchHHHHHHHHHHC-CCeEEEEecChhhHHhhhcCCceeEEEeccCChHH-HHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAAS-DCRVVATGRSKATMADLEQDPRFFVQELDVLSEQS-VQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~-i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||+|+||++++++|+++ |++|++++|+.+..........+.++.+|+++.++ ++.+++       .+|+|||+||...
T Consensus       322 GatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-------~~D~Vih~Aa~~~  394 (660)
T 1z7e_A          322 GVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK-------KCDVVLPLVAIAT  394 (660)
T ss_dssp             TTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHH-------HCSEEEECCCCCC
T ss_pred             cCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhc-------CCCEEEECceecC
Confidence            89999999999999998 89999999987765555445678899999998764 554443       5799999999643


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC------------------CCchhhhH
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG------------------PWAGTYTA  140 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------------------~~~~~y~~  140 (162)
                      ..    ...++++..+++|+.++..+++++.+    .+ +++|++||...+.+.                  .+...|+.
T Consensus       395 ~~----~~~~~~~~~~~~Nv~gt~~ll~aa~~----~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~  465 (660)
T 1z7e_A          395 PI----EYTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSV  465 (660)
T ss_dssp             TH----HHHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHH
T ss_pred             cc----ccccCHHHHHHhhhHHHHHHHHHHHH----hC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHH
Confidence            21    12355678999999999999888754    33 799999997665321                  12236999


Q ss_pred             hHHHHHHHHHHHHHHh
Q 042185          141 SKAALHSLTDTLRLEL  156 (162)
Q Consensus       141 sKaa~~~l~~~l~~e~  156 (162)
                      +|.+.+.+++.++.+.
T Consensus       466 sK~~~E~~~~~~~~~~  481 (660)
T 1z7e_A          466 SKQLLDRVIWAYGEKE  481 (660)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHc
Confidence            9999999999988764

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.68  E-value=8.3e-17  Score=115.47  Aligned_cols=125  Identities=17%  Similarity=0.217  Sum_probs=101.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|+||++++++|+++|++|++++|.                .+|++|.+++..++++.     ++|+|||+|+.....
T Consensus        12 GatG~iG~~l~~~L~~~g~~V~~~~r~----------------~~D~~d~~~~~~~~~~~-----~~d~vi~~a~~~~~~   70 (287)
T 3sc6_A           12 GANGQLGKQLQEELNPEEYDIYPFDKK----------------LLDITNISQVQQVVQEI-----RPHIIIHCAAYTKVD   70 (287)
T ss_dssp             STTSHHHHHHHHHSCTTTEEEEEECTT----------------TSCTTCHHHHHHHHHHH-----CCSEEEECCCCCCHH
T ss_pred             CCCCHHHHHHHHHHHhCCCEEEEeccc----------------ccCCCCHHHHHHHHHhc-----CCCEEEECCcccChH
Confidence            899999999999999999999999992                38999999999988876     789999999975321


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC-----------CCCchhhhHhHHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP-----------GPWAGTYTASKAALHSLT  149 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~y~~sKaa~~~l~  149 (162)
                          ...++++..+++|+.++..+++++.+    .+ .++|++||...+.+           ..+...|+.+|.+.+.++
T Consensus        71 ----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  141 (287)
T 3sc6_A           71 ----QAEKERDLAYVINAIGARNVAVASQL----VG-AKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFV  141 (287)
T ss_dssp             ----HHTTCHHHHHHHHTHHHHHHHHHHHH----HT-CEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             ----HHhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence                12256788999999999999998744    22 48999999876533           223568999999999999


Q ss_pred             HHHHHH
Q 042185          150 DTLRLE  155 (162)
Q Consensus       150 ~~l~~e  155 (162)
                      +.++.+
T Consensus       142 ~~~~~~  147 (287)
T 3sc6_A          142 KELHNK  147 (287)
T ss_dssp             HHHCSS
T ss_pred             HHhCCC
Confidence            887653

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.68  E-value=3e-17  Score=113.00  Aligned_cols=125  Identities=14%  Similarity=0.087  Sum_probs=100.8

Q ss_pred             CCCCchHHHHHHHHHHCCC--eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDC--RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||+|+||++++++|+++|+  +|++++|+.+.     ....+.++.+|+++.+++++++         +|++||++|...
T Consensus        12 GatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-----~~~~~~~~~~D~~~~~~~~~~~---------~d~vi~~a~~~~   77 (215)
T 2a35_A           12 GATGLTGEHLLDRILSEPTLAKVIAPARKALA-----EHPRLDNPVGPLAELLPQLDGS---------IDTAFCCLGTTI   77 (215)
T ss_dssp             CTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----CCTTEECCBSCHHHHGGGCCSC---------CSEEEECCCCCH
T ss_pred             CCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-----cCCCceEEeccccCHHHHHHhh---------hcEEEECeeecc
Confidence            8999999999999999998  99999998764     2346778889998887766554         899999999642


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHH
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDT  151 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~  151 (162)
                      .      +.++++..+++|+.++..+++++.+    .+.+++|++||...+.+  +...|+.+|++++.+++.
T Consensus        78 ~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~--~~~~y~~sK~~~e~~~~~  138 (215)
T 2a35_A           78 K------EAGSEEAFRAVDFDLPLAVGKRALE----MGARHYLVVSALGADAK--SSIFYNRVKGELEQALQE  138 (215)
T ss_dssp             H------HHSSHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCTT--CSSHHHHHHHHHHHHHTT
T ss_pred             c------cCCCHHHHHHhhHHHHHHHHHHHHH----cCCCEEEEECCcccCCC--CccHHHHHHHHHHHHHHH
Confidence            1      2356788899999999999888744    34568999999877653  345899999999998875

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.68  E-value=5.5e-17  Score=118.89  Aligned_cols=140  Identities=15%  Similarity=0.112  Sum_probs=98.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHH------hhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMA------DLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~------~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+|+||++++++|+++|++|+++.|+.+...      .+.....+.++.+|++|.+++..+++       .+|+|||+|
T Consensus        16 GatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~Vih~A   88 (338)
T 2rh8_A           16 GGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIA-------GCDFVFHVA   88 (338)
T ss_dssp             CTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHT-------TCSEEEEES
T ss_pred             CCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHc-------CCCEEEEeC
Confidence            89999999999999999999999888754321      22222467888999999888777654       479999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC-----C----C------------C
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA-----P----G------------P  133 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----~----~------------~  133 (162)
                      +....   .  ..+..+..+++|+.++..+++++.+..   +.++||++||..+..     +    .            +
T Consensus        89 ~~~~~---~--~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  160 (338)
T 2rh8_A           89 TPVHF---A--SEDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTS  160 (338)
T ss_dssp             SCCCC--------------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-----
T ss_pred             CccCC---C--CCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccc
Confidence            85321   1  112234589999999999999986532   246999999976321     0    0            0


Q ss_pred             ---CchhhhHhHHHHHHHHHHHHHH
Q 042185          134 ---WAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus       134 ---~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                         ....|+.+|.+.+.+++.++.+
T Consensus       161 ~~~~~~~Y~~sK~~~E~~~~~~~~~  185 (338)
T 2rh8_A          161 AKPPTWGYPASKTLAEKAAWKFAEE  185 (338)
T ss_dssp             --CCCCCCTTSCCHHHHHHHHHHHH
T ss_pred             cCCccchHHHHHHHHHHHHHHHHHH
Confidence               0115999999999988877654

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.67  E-value=1.1e-15  Score=111.19  Aligned_cols=129  Identities=16%  Similarity=0.173  Sum_probs=102.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|+||++++++|+++|++|++++|+.               .+|++|.++++.++++.     ++|+|||+|+.....
T Consensus        10 GatG~iG~~l~~~L~~~g~~v~~~~r~~---------------~~D~~d~~~~~~~~~~~-----~~d~vih~a~~~~~~   69 (321)
T 1e6u_A           10 GHRGMVGSAIRRQLEQRGDVELVLRTRD---------------ELNLLDSRAVHDFFASE-----RIDQVYLAAAKVGGI   69 (321)
T ss_dssp             TTTSHHHHHHHHHHTTCTTEEEECCCTT---------------TCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCCH
T ss_pred             CCCcHHHHHHHHHHHhCCCeEEEEecCc---------------cCCccCHHHHHHHHHhc-----CCCEEEEcCeecCCc
Confidence            8999999999999999999999988863               27999999988888765     789999999964211


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC---------------C-CCchhhhHhHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP---------------G-PWAGTYTASKAA  144 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---------------~-~~~~~y~~sKaa  144 (162)
                         ....++.+..+++|+.++..+++++.+    .+..++|++||...+..               . |....|+.+|.+
T Consensus        70 ---~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~  142 (321)
T 1e6u_A           70 ---VANNTYPADFIYQNMMIESNIIHAAHQ----NDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIA  142 (321)
T ss_dssp             ---HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHH
T ss_pred             ---chhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHH
Confidence               112345678899999999999988754    34469999999876532               1 113589999999


Q ss_pred             HHHHHHHHHHHh
Q 042185          145 LHSLTDTLRLEL  156 (162)
Q Consensus       145 ~~~l~~~l~~e~  156 (162)
                      .+.+++.++.+.
T Consensus       143 ~E~~~~~~~~~~  154 (321)
T 1e6u_A          143 GIKLCESYNRQY  154 (321)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh
Confidence            999999988764

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.67  E-value=1.1e-15  Score=106.97  Aligned_cols=104  Identities=16%  Similarity=0.134  Sum_probs=79.5

Q ss_pred             CCCCchHHHHHHHHHHCC-CeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASD-CRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g-~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      ||+|+||++++++|+++| ++|++++|+.+.+.+.. ...+.++.+|++|.++++++++       .+|+||||+|..  
T Consensus        30 GatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~-------~~D~vv~~a~~~--   99 (236)
T 3qvo_A           30 GAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY-PTNSQIIMGDVLNHAALKQAMQ-------GQDIVYANLTGE--   99 (236)
T ss_dssp             TTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC-CTTEEEEECCTTCHHHHHHHHT-------TCSEEEEECCST--
T ss_pred             eCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc-cCCcEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC--
Confidence            899999999999999999 89999999987665443 2468899999999998888765       569999999851  


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCC
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPW  134 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  134 (162)
                            ..              ...++.+++.+++.+.++||++||..++.+.+.
T Consensus       100 ------~~--------------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~  134 (236)
T 3qvo_A          100 ------DL--------------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPG  134 (236)
T ss_dssp             ------TH--------------HHHHHHHHHHHHHTTCCEEEEECCCCC------
T ss_pred             ------ch--------------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCc
Confidence                  10              123567777787777789999999887665443

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.65  E-value=2.8e-15  Score=110.15  Aligned_cols=135  Identities=13%  Similarity=0.124  Sum_probs=102.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhh----HHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKAT----MADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~----~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|+||++++++|+++|++|++++|+...    +........+.++.+|+.+..            +..+|+|||+|+.
T Consensus        34 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~d~vih~A~~  101 (343)
T 2b69_A           34 GGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL------------YIEVDQIYHLASP  101 (343)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC------------CCCCSEEEECCSC
T ss_pred             cCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh------------hcCCCEEEECccc
Confidence            899999999999999999999999986432    222222356889999998752            4579999999996


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC----------------CCCCchhhhH
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA----------------PGPWAGTYTA  140 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----------------~~~~~~~y~~  140 (162)
                      ......    .++++..+++|+.++..+++++.+    .+ .++|++||...+.                +..+...|+.
T Consensus       102 ~~~~~~----~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~  172 (343)
T 2b69_A          102 ASPPNY----MYNPIKTLKTNTIGTLNMLGLAKR----VG-ARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDE  172 (343)
T ss_dssp             CSHHHH----TTCHHHHHHHHHHHHHHHHHHHHH----HT-CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHH
T ss_pred             cCchhh----hhCHHHHHHHHHHHHHHHHHHHHH----hC-CcEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHH
Confidence            432111    134567889999999999998754    23 4999999976542                2234567999


Q ss_pred             hHHHHHHHHHHHHHHh
Q 042185          141 SKAALHSLTDTLRLEL  156 (162)
Q Consensus       141 sKaa~~~l~~~l~~e~  156 (162)
                      +|.+.+.+++.++.+.
T Consensus       173 sK~~~E~~~~~~~~~~  188 (343)
T 2b69_A          173 GKRVAETMCYAYMKQE  188 (343)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999988764

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.65  E-value=6.4e-16  Score=111.38  Aligned_cols=126  Identities=17%  Similarity=0.101  Sum_probs=100.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|+||++++++|+ +|++|++++|+.+            ++.+|++|.++++++++..     ++|+|||+|+.....
T Consensus         7 GatG~iG~~l~~~L~-~g~~V~~~~r~~~------------~~~~D~~d~~~~~~~~~~~-----~~d~vih~a~~~~~~   68 (299)
T 1n2s_A            7 GKTGQVGWELQRSLA-PVGNLIALDVHSK------------EFCGDFSNPKGVAETVRKL-----RPDVIVNAAAHTAVD   68 (299)
T ss_dssp             CTTSHHHHHHHHHTT-TTSEEEEECTTCS------------SSCCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCHH
T ss_pred             CCCCHHHHHHHHHhh-cCCeEEEeccccc------------cccccCCCHHHHHHHHHhc-----CCCEEEECcccCCHh
Confidence            899999999999999 8999999999752            3568999999998888765     789999999964321


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC-----------CCchhhhHhHHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG-----------PWAGTYTASKAALHSLT  149 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~y~~sKaa~~~l~  149 (162)
                          .+.++++..+++|+.++..+++++.+    .+ .++|++||...+.+.           .+...|+.+|.+.+.++
T Consensus        69 ----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  139 (299)
T 1n2s_A           69 ----KAESEPELAQLLNATSVEAIAKAANE----TG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKAL  139 (299)
T ss_dssp             ----HHTTCHHHHHHHHTHHHHHHHHHHTT----TT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHH
T ss_pred             ----hhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHH
Confidence                12345678899999999999998743    22 489999998665432           22568999999999999


Q ss_pred             HHHH
Q 042185          150 DTLR  153 (162)
Q Consensus       150 ~~l~  153 (162)
                      +.++
T Consensus       140 ~~~~  143 (299)
T 1n2s_A          140 QDNC  143 (299)
T ss_dssp             HHHC
T ss_pred             HHhC
Confidence            8765

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.63  E-value=3.1e-15  Score=114.68  Aligned_cols=137  Identities=20%  Similarity=0.179  Sum_probs=101.7

Q ss_pred             CCCCchHHHHHHHHHHC---CCeEEEEecChhhHHh------hhc--------------CCceeEEEeccCCh------H
Q 042185            1 CSQGGIGHALARAFAAS---DCRVVATGRSKATMAD------LEQ--------------DPRFFVQELDVLSE------Q   51 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~---g~~vi~~~r~~~~~~~------~~~--------------~~~~~~~~~D~~~~------~   51 (162)
                      ||+|+||++++++|+++   |++|++++|+.+....      ...              ..++.++.+|++++      +
T Consensus        80 GatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~~~~gld~~  159 (478)
T 4dqv_A           80 GATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQP  159 (478)
T ss_dssp             CTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTSGGGGCCHH
T ss_pred             CCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCCcccCCCHH
Confidence            89999999999999998   8999999997643211      111              25789999999854      4


Q ss_pred             HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC
Q 042185           52 SVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP  131 (162)
Q Consensus        52 ~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~  131 (162)
                      +++.+++       ++|+|||||+....        +.++..+++|+.++..+++.+..    .+..+||++||...+..
T Consensus       160 ~~~~~~~-------~~D~Vih~Aa~~~~--------~~~~~~~~~Nv~gt~~ll~aa~~----~~~~~~V~iSS~~v~~~  220 (478)
T 4dqv_A          160 MWRRLAE-------TVDLIVDSAAMVNA--------FPYHELFGPNVAGTAELIRIALT----TKLKPFTYVSTADVGAA  220 (478)
T ss_dssp             HHHHHHH-------HCCEEEECCSSCSB--------SSCCEEHHHHHHHHHHHHHHHTS----SSCCCEEEEEEGGGGTT
T ss_pred             HHHHHHc-------CCCEEEECccccCC--------cCHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeehhhcCc
Confidence            4555443       57999999997543        23346778999999999888743    34468999999765432


Q ss_pred             CCC----------------------chhhhHhHHHHHHHHHHHHHHh
Q 042185          132 GPW----------------------AGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus       132 ~~~----------------------~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                      ...                      ...|+.+|.+.+.+++.++.+.
T Consensus       221 ~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~  267 (478)
T 4dqv_A          221 IEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC  267 (478)
T ss_dssp             SCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh
Confidence            111                      1339999999999999988754

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.59  E-value=1.5e-14  Score=103.60  Aligned_cols=122  Identities=14%  Similarity=0.102  Sum_probs=94.9

Q ss_pred             CCCCchHHHHHHHHHHC--CCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAAS--DCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||+|+||++++++|+++  |++|++++|+.+..+.+.. ..+.++.+|++|.+++..+++       .+|+|||+++...
T Consensus         7 GatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~d~~~l~~~~~-------~~d~vi~~a~~~~   78 (287)
T 2jl1_A            7 GATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD-QGVEVRHGDYNQPESLQKAFA-------GVSKLLFISGPHY   78 (287)
T ss_dssp             TTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH-TTCEEEECCTTCHHHHHHHTT-------TCSEEEECCCCCS
T ss_pred             cCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh-cCCeEEEeccCCHHHHHHHHh-------cCCEEEEcCCCCc
Confidence            89999999999999998  9999999998766554432 357889999999988777654       4799999998521


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHH
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDT  151 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~  151 (162)
                             . +      ++|+.++..+++++.    +.+.++||++||.....   ....|+.+|.+.+.+++.
T Consensus        79 -------~-~------~~n~~~~~~l~~a~~----~~~~~~~v~~Ss~~~~~---~~~~y~~~K~~~E~~~~~  130 (287)
T 2jl1_A           79 -------D-N------TLLIVQHANVVKAAR----DAGVKHIAYTGYAFAEE---SIIPLAHVHLATEYAIRT  130 (287)
T ss_dssp             -------C-H------HHHHHHHHHHHHHHH----HTTCSEEEEEEETTGGG---CCSTHHHHHHHHHHHHHH
T ss_pred             -------C-c------hHHHHHHHHHHHHHH----HcCCCEEEEECCCCCCC---CCCchHHHHHHHHHHHHH
Confidence                   1 1      568888887777763    34456999999987642   224799999999998864

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.59  E-value=3.3e-15  Score=108.05  Aligned_cols=132  Identities=10%  Similarity=0.031  Sum_probs=97.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|+||++++++|+++|+      +...      ....+.++.+|++|.+++.++++..     ++|+|||+|+.....
T Consensus        13 GatG~iG~~l~~~L~~~g~------~~~~------~~~~~~~~~~D~~d~~~~~~~~~~~-----~~d~Vih~A~~~~~~   75 (319)
T 4b8w_A           13 GGSGLVGKAIQKVVADGAG------LPGE------DWVFVSSKDADLTDTAQTRALFEKV-----QPTHVIHLAAMVGGL   75 (319)
T ss_dssp             TCSSHHHHHHHHHHHTTTC------CTTC------EEEECCTTTCCTTSHHHHHHHHHHS-----CCSEEEECCCCCCCH
T ss_pred             CCCcHHHHHHHHHHHhcCC------cccc------cccccCceecccCCHHHHHHHHhhc-----CCCEEEECceecccc
Confidence            8999999999999999997      1110      0122344578999999998888764     799999999974211


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC----------------CCCchhhhHhHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP----------------GPWAGTYTASKAA  144 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----------------~~~~~~y~~sKaa  144 (162)
                         ..+.++.+..+++|+.++..+++++..    .+..++|++||...+..                .|....|+.+|.+
T Consensus        76 ---~~~~~~~~~~~~~nv~gt~~ll~a~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~  148 (319)
T 4b8w_A           76 ---FRNIKYNLDFWRKNVHMNDNVLHSAFE----VGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRM  148 (319)
T ss_dssp             ---HHHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHH
T ss_pred             ---cccccCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHH
Confidence               112345677899999999999888643    44569999999865532                1222369999999


Q ss_pred             HHHHHHHHHHHh
Q 042185          145 LHSLTDTLRLEL  156 (162)
Q Consensus       145 ~~~l~~~l~~e~  156 (162)
                      .+.+++.++.+.
T Consensus       149 ~E~~~~~~~~~~  160 (319)
T 4b8w_A          149 IDVQNRAYFQQY  160 (319)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhh
Confidence            999999988765

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.56  E-value=4.6e-15  Score=106.38  Aligned_cols=125  Identities=18%  Similarity=0.083  Sum_probs=95.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      | +|+||++++++|+++|++|++++|+.+.+     ...+.++.+|++|.+++..+++      +++|+|||+|+..   
T Consensus        10 G-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~------~~~d~vih~a~~~---   74 (286)
T 3gpi_A           10 G-CGDLGLELARRLTAQGHEVTGLRRSAQPM-----PAGVQTLIADVTRPDTLASIVH------LRPEILVYCVAAS---   74 (286)
T ss_dssp             C-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-----CTTCCEEECCTTCGGGCTTGGG------GCCSEEEECHHHH---
T ss_pred             C-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-----ccCCceEEccCCChHHHHHhhc------CCCCEEEEeCCCC---
Confidence            6 59999999999999999999999987652     3568899999999988877654      3699999999852   


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC-----------CCchhhhHhHHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG-----------PWAGTYTASKAALHSLT  149 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~y~~sKaa~~~l~  149 (162)
                            .++.+..+++|+.++..+++++.    +.+.+++|++||...+...           .+...|+.+|.+.+.+ 
T Consensus        75 ------~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-  143 (286)
T 3gpi_A           75 ------EYSDEHYRLSYVEGLRNTLSALE----GAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-  143 (286)
T ss_dssp             ------HHC-----CCSHHHHHHHHHHTT----TSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-
T ss_pred             ------CCCHHHHHHHHHHHHHHHHHHHh----hCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-
Confidence                  24456778899999988888763    3455799999998665322           2356899999999887 


Q ss_pred             HH
Q 042185          150 DT  151 (162)
Q Consensus       150 ~~  151 (162)
                      +.
T Consensus       144 ~~  145 (286)
T 3gpi_A          144 LA  145 (286)
T ss_dssp             GG
T ss_pred             Hh
Confidence            43

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.55  E-value=1e-13  Score=102.42  Aligned_cols=124  Identities=15%  Similarity=0.037  Sum_probs=91.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhH--HhhhcCCceeEEEec-cCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATM--ADLEQDPRFFVQELD-VLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~--~~~~~~~~~~~~~~D-~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      ||+|+||++++++|+++|++|++++|+.+..  +.+.....+.++.+| ++|.+++..+++       .+|.||+|++..
T Consensus        12 GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~-------~~d~Vi~~a~~~   84 (352)
T 1xgk_A           12 GATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFE-------GAHLAFINTTSQ   84 (352)
T ss_dssp             STTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHT-------TCSEEEECCCST
T ss_pred             CCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHh-------cCCEEEEcCCCC
Confidence            8999999999999999999999999987654  333333468889999 999988877654       469999998753


Q ss_pred             CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEecccc-ccCCCCCchhhhHhHHHHHHHHHH
Q 042185           78 CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVT-VAAPGPWAGTYTASKAALHSLTDT  151 (162)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~-~~~~~~~~~~y~~sKaa~~~l~~~  151 (162)
                      ..               +.|..+     +.+++.+++.+ .++||++||.. ...+.+....|..+|++.+.+++.
T Consensus        85 ~~---------------~~~~~~-----~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~E~~~~~  140 (352)
T 1xgk_A           85 AG---------------DEIAIG-----KDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQ  140 (352)
T ss_dssp             TS---------------CHHHHH-----HHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHT
T ss_pred             Cc---------------HHHHHH-----HHHHHHHHHcCCccEEEEeCCccccccCCCCCccHHHHHHHHHHHHHH
Confidence            10               123332     34444444555 57999999986 344444557899999999998875

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.54  E-value=4.7e-14  Score=100.91  Aligned_cols=120  Identities=13%  Similarity=0.124  Sum_probs=88.3

Q ss_pred             CCCCchHHHHHHHHHHC--CCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAAS--DCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||+|+||++++++|+++  |++|++++|+.+..+.+.. ..+.++.+|++|.++++++++       .+|+|||+++...
T Consensus         6 GatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~-------~~d~vi~~a~~~~   77 (286)
T 2zcu_A            6 GATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA-QGITVRQADYGDEAALTSALQ-------GVEKLLLISSSEV   77 (286)
T ss_dssp             STTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH-TTCEEEECCTTCHHHHHHHTT-------TCSEEEECC----
T ss_pred             cCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc-CCCeEEEcCCCCHHHHHHHHh-------CCCEEEEeCCCCc
Confidence            89999999999999998  9999999998766544432 357889999999988776653       5799999998521


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHH
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDT  151 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~  151 (162)
                                      ..|+.++..+++++    ++.+.++||++||..++.   ....|+.+|.+.+.+++.
T Consensus        78 ----------------~~~~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~~---~~~~y~~sK~~~e~~~~~  127 (286)
T 2zcu_A           78 ----------------GQRAPQHRNVINAA----KAAGVKFIAYTSLLHADT---SPLGLADEHIETEKMLAD  127 (286)
T ss_dssp             --------------------CHHHHHHHHH----HHHTCCEEEEEEETTTTT---CCSTTHHHHHHHHHHHHH
T ss_pred             ----------------hHHHHHHHHHHHHH----HHcCCCEEEEECCCCCCC---CcchhHHHHHHHHHHHHH
Confidence                            02555665555554    444567999999987652   235799999999998864

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.53  E-value=1.5e-14  Score=104.92  Aligned_cols=130  Identities=19%  Similarity=0.156  Sum_probs=92.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh----hHHhhh---cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA----TMADLE---QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~----~~~~~~---~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+|+||++++++|+++|++|++++|+..    ....+.   ....+.++.+|++                 ++|+|||+
T Consensus        14 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----------------~~d~vi~~   76 (321)
T 3vps_A           14 GGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS-----------------DVRLVYHL   76 (321)
T ss_dssp             TTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT-----------------TEEEEEEC
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc-----------------cCCEEEEC
Confidence            89999999999999999999999999765    111111   1234555555554                 78999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC-----------CCchhhhHhH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG-----------PWAGTYTASK  142 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~y~~sK  142 (162)
                      |+........    ++....++ |+.++..+++++..    .+..++|++||...+...           .+...|+.+|
T Consensus        77 a~~~~~~~~~----~~~~~~~~-n~~~~~~ll~a~~~----~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK  147 (321)
T 3vps_A           77 ASHKSVPRSF----KQPLDYLD-NVDSGRHLLALCTS----VGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASK  147 (321)
T ss_dssp             CCCCCHHHHT----TSTTTTHH-HHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHH
T ss_pred             CccCChHHHH----hCHHHHHH-HHHHHHHHHHHHHH----cCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHH
Confidence            9975421111    11223445 88888888888644    345699999998765432           2356799999


Q ss_pred             HHHHHHHHHHHHHh
Q 042185          143 AALHSLTDTLRLEL  156 (162)
Q Consensus       143 aa~~~l~~~l~~e~  156 (162)
                      .+.+.+++.++.+.
T Consensus       148 ~~~E~~~~~~~~~~  161 (321)
T 3vps_A          148 VGLEMVAGAHQRAS  161 (321)
T ss_dssp             HHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHHHHc
Confidence            99999999988764

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.51  E-value=4.3e-14  Score=109.00  Aligned_cols=134  Identities=16%  Similarity=0.085  Sum_probs=100.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhH---Hhh--------------hcCCceeEEEeccCChHHHHHHHHHHHHH
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATM---ADL--------------EQDPRFFVQELDVLSEQSVQNVLSNVLEK   63 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~---~~~--------------~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   63 (162)
                      ||+|+||.+++++|.++|++|++++|+....   ..+              ....++.++.+|+++.+++.        .
T Consensus       157 GatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--------~  228 (508)
T 4f6l_B          157 GATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--------L  228 (508)
T ss_dssp             CTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--------C
T ss_pred             CCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--------C
Confidence            8999999999999999999999999986621   111              12367999999999977776        3


Q ss_pred             cCCccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccc--cC-----------
Q 042185           64 FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTV--AA-----------  130 (162)
Q Consensus        64 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~--~~-----------  130 (162)
                      ...+|+|||+|+....       ...++..+++|+.++..+++.+.+     +..++|++||...  ..           
T Consensus       229 ~~~~D~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~v~iSS~~vG~~~~~~~~~~~~~E  296 (508)
T 4f6l_B          229 PENMDTIIHAGARTDH-------FGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTYFDIDTEDVTFSE  296 (508)
T ss_dssp             SSCCSEEEECCCC---------------CCHHHHHHHHHHHHHHHHT-----TTCEEEEEEESCTTSEECTTCSCCEECT
T ss_pred             ccCCCEEEECCceecC-------CCCHHHHhhhHHHHHHHHHHHHHh-----CCCcEEEeCChhhccCCccCCcCccccc
Confidence            4689999999997421       245677888999999999998754     3479999999776  10           


Q ss_pred             -----CCCCchhhhHhHHHHHHHHHHHHH
Q 042185          131 -----PGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus       131 -----~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                           +..+...|+.+|.+.+.+++.++.
T Consensus       297 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~  325 (508)
T 4f6l_B          297 ADVYKGQLLTSPYTRSKFYSELKVLEAVN  325 (508)
T ss_dssp             TCSCSSBCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccCCCcHHHHHHHHHHHHHHHHH
Confidence                 012456799999999999988653

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.45  E-value=4.4e-13  Score=96.61  Aligned_cols=127  Identities=13%  Similarity=0.027  Sum_probs=88.9

Q ss_pred             CCCCchHHHHHHHHHHCC-CeEEEEecChhhHH--hhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFAASD-CRVVATGRSKATMA--DLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g-~~vi~~~r~~~~~~--~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      ||+|+||++++++|+++| ++|++++|+.+...  .+. ...+.++.+|++|.++++.+++       .+|.|||+++..
T Consensus        12 GatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~-~~~~~~~~~D~~d~~~l~~~~~-------~~d~vi~~a~~~   83 (299)
T 2wm3_A           12 GGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELR-LQGAEVVQGDQDDQVIMELALN-------GAYATFIVTNYW   83 (299)
T ss_dssp             TTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHH-HTTCEEEECCTTCHHHHHHHHT-------TCSEEEECCCHH
T ss_pred             CCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHH-HCCCEEEEecCCCHHHHHHHHh-------cCCEEEEeCCCC
Confidence            899999999999999998 99999999876432  222 2457889999999988877654       479999999842


Q ss_pred             CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC--CCCCchhhhHhHHHHHHHHHH
Q 042185           78 CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA--PGPWAGTYTASKAALHSLTDT  151 (162)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~~y~~sKaa~~~l~~~  151 (162)
                      ...     .       .+.|+.+.    +.+++.+++.+.++||++|+.....  ..+....|..+|.+++.+++.
T Consensus        84 ~~~-----~-------~~~~~~~~----~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~~e~~~~~  143 (299)
T 2wm3_A           84 ESC-----S-------QEQEVKQG----KLLADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGEVEEYFRD  143 (299)
T ss_dssp             HHT-----C-------HHHHHHHH----HHHHHHHHHHTCSEEEECCCCCHHHHTTTSCCCHHHHHHHHHHHHHHH
T ss_pred             ccc-----c-------chHHHHHH----HHHHHHHHHcCCCEEEEEcCccccccCCCcccCchhhHHHHHHHHHHH
Confidence            110     0       12334333    4444445555667999966543222  112346799999999998875

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.43  E-value=2.8e-12  Score=91.78  Aligned_cols=117  Identities=12%  Similarity=0.071  Sum_probs=86.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      |+ |.||++++++|.++|++|+.++|+.+....+.. ..+.++.+|++|.+            ...+|+|||+|+.....
T Consensus        12 Ga-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~d~~------------~~~~d~vi~~a~~~~~~   77 (286)
T 3ius_A           12 GH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-SGAEPLLWPGEEPS------------LDGVTHLLISTAPDSGG   77 (286)
T ss_dssp             TC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-TTEEEEESSSSCCC------------CTTCCEEEECCCCBTTB
T ss_pred             CC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-CCCeEEEecccccc------------cCCCCEEEECCCccccc
Confidence            76 999999999999999999999999877655543 46889999999833            45889999999964321


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhh--cCCCeEEEeccccccCCC-----------CCchhhhHhHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY--RKKGKIINVGSVTVAAPG-----------PWAGTYTASKAALHS  147 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~iv~isS~~~~~~~-----------~~~~~y~~sKaa~~~  147 (162)
                             +..              .+.+++.+++  .+..++|++||...+...           .+...|+.+|.+.+.
T Consensus        78 -------~~~--------------~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  136 (286)
T 3ius_A           78 -------DPV--------------LAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQ  136 (286)
T ss_dssp             -------CHH--------------HHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHH
T ss_pred             -------cHH--------------HHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHH
Confidence                   111              1333333444  445799999997654322           224579999999999


Q ss_pred             HHHHH
Q 042185          148 LTDTL  152 (162)
Q Consensus       148 l~~~l  152 (162)
                      +++.+
T Consensus       137 ~~~~~  141 (286)
T 3ius_A          137 QWQAV  141 (286)
T ss_dssp             HHHHS
T ss_pred             HHHhh
Confidence            88876

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.41  E-value=8.1e-13  Score=97.96  Aligned_cols=114  Identities=20%  Similarity=0.212  Sum_probs=90.4

Q ss_pred             CCCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      ||+|+||++++++|+++|+ +|+.++|+                    +|.++++.+++       .+|+|||+|+....
T Consensus         7 GatG~iG~~l~~~L~~~g~~~v~~~d~~--------------------~d~~~l~~~~~-------~~d~Vih~a~~~~~   59 (369)
T 3st7_A            7 GAKGFVGKNLKADLTSTTDHHIFEVHRQ--------------------TKEEELESALL-------KADFIVHLAGVNRP   59 (369)
T ss_dssp             TTTSHHHHHHHHHHHHHCCCEEEECCTT--------------------CCHHHHHHHHH-------HCSEEEECCCSBCT
T ss_pred             CCCCHHHHHHHHHHHhCCCCEEEEECCC--------------------CCHHHHHHHhc-------cCCEEEECCcCCCC
Confidence            8999999999999999998 88877774                    66777777765       37999999997543


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCC-CeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhc
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK-GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                              ++++..+++|+.++..+++++.    +.+. .++|++||...+.    ...|+.+|.+.+.+++.++.+.+
T Consensus        60 --------~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~~v~~Ss~~~~~----~~~Y~~sK~~~E~~~~~~~~~~g  122 (369)
T 3st7_A           60 --------EHDKEFSLGNVSYLDHVLDILT----RNTKKPAILLSSSIQATQ----DNPYGESKLQGEQLLREYAEEYG  122 (369)
T ss_dssp             --------TCSTTCSSSCCBHHHHHHHHHT----TCSSCCEEEEEEEGGGGS----CSHHHHHHHHHHHHHHHHHHHHC
T ss_pred             --------CCHHHHHHHHHHHHHHHHHHHH----HhCCCCeEEEeCchhhcC----CCCchHHHHHHHHHHHHHHHHhC
Confidence                    1234467789999988888863    3333 4899999987665    56899999999999999887753

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.40  E-value=4e-12  Score=91.74  Aligned_cols=119  Identities=15%  Similarity=0.203  Sum_probs=83.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh-------hhHHhhh--cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK-------ATMADLE--QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLV   71 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~-------~~~~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi   71 (162)
                      ||+|+||++++++|+++|++|++++|+.       ++.+.+.  ....+.++.+|++|.+++.++++       .+|+||
T Consensus         9 GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-------~~d~vi   81 (307)
T 2gas_A            9 GPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIK-------QVDIVI   81 (307)
T ss_dssp             STTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-------TCSEEE
T ss_pred             CCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHh-------CCCEEE
Confidence            8999999999999999999999999986       4333221  12467889999999988777664       589999


Q ss_pred             ECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccC------CCCCchhhhHhHHH
Q 042185           72 NNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAA------PGPWAGTYTASKAA  144 (162)
Q Consensus        72 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~------~~~~~~~y~~sKaa  144 (162)
                      |+++...                   +.+...++++    +++.+ ..++|.  |..+..      +.|....| .+|.+
T Consensus        82 ~~a~~~~-------------------~~~~~~l~~a----a~~~g~v~~~v~--S~~g~~~~~~~~~~p~~~~y-~sK~~  135 (307)
T 2gas_A           82 CAAGRLL-------------------IEDQVKIIKA----IKEAGNVKKFFP--SEFGLDVDRHDAVEPVRQVF-EEKAS  135 (307)
T ss_dssp             ECSSSSC-------------------GGGHHHHHHH----HHHHCCCSEEEC--SCCSSCTTSCCCCTTHHHHH-HHHHH
T ss_pred             ECCcccc-------------------cccHHHHHHH----HHhcCCceEEee--cccccCcccccCCCcchhHH-HHHHH
Confidence            9998632                   2233444444    34444 567763  433321      12335679 99999


Q ss_pred             HHHHHHHH
Q 042185          145 LHSLTDTL  152 (162)
Q Consensus       145 ~~~l~~~l  152 (162)
                      ++.+++..
T Consensus       136 ~e~~~~~~  143 (307)
T 2gas_A          136 IRRVIEAE  143 (307)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHc
Confidence            99887653

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.39  E-value=7.8e-12  Score=89.60  Aligned_cols=103  Identities=15%  Similarity=0.115  Sum_probs=77.5

Q ss_pred             CCCCchHHHHHHHHHHC-CCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAAS-DCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      ||+|+||++++++|.++ |++|++++|+.+....+. ...+.++.+|++|.+++..+++       .+|.|||+++....
T Consensus         7 GatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~-~~~v~~~~~D~~d~~~l~~~~~-------~~d~vi~~a~~~~~   78 (289)
T 3e48_A            7 GATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW-RGKVSVRQLDYFNQESMVEAFK-------GMDTVVFIPSIIHP   78 (289)
T ss_dssp             TTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG-BTTBEEEECCTTCHHHHHHHTT-------TCSEEEECCCCCCS
T ss_pred             cCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh-hCCCEEEEcCCCCHHHHHHHHh-------CCCEEEEeCCCCcc
Confidence            89999999999999998 999999999987655443 3578899999999988777654       67999999986422


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccccc
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVA  129 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  129 (162)
                      .              ..|+.+.    +.+++.+++.+.++||++||....
T Consensus        79 ~--------------~~~~~~~----~~l~~aa~~~gv~~iv~~Ss~~~~  110 (289)
T 3e48_A           79 S--------------FKRIPEV----ENLVYAAKQSGVAHIIFIGYYADQ  110 (289)
T ss_dssp             H--------------HHHHHHH----HHHHHHHHHTTCCEEEEEEESCCS
T ss_pred             c--------------hhhHHHH----HHHHHHHHHcCCCEEEEEcccCCC
Confidence            1              1144444    444444555666799999996543

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.38  E-value=2.1e-11  Score=88.21  Aligned_cols=122  Identities=14%  Similarity=0.154  Sum_probs=86.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh-----hhHHhhh--cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK-----ATMADLE--QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~-----~~~~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+|+||++++++|+++|++|++++|+.     ++.+.+.  ....+.++.+|++|.+++.++++       .+|.|||+
T Consensus        11 GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~-------~~d~vi~~   83 (313)
T 1qyd_A           11 GGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------QVDVVISA   83 (313)
T ss_dssp             STTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------TCSEEEEC
T ss_pred             cCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHh-------CCCEEEEC
Confidence            8999999999999999999999999984     3332221  23568899999999988877654       58999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccC------C-CCCchhhhHhHHHH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAA------P-GPWAGTYTASKAAL  145 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~------~-~~~~~~y~~sKaa~  145 (162)
                      ++.....               .|+.+...+++++    ++.+ .++||+ | ..+..      + .|....| .+|.++
T Consensus        84 a~~~~~~---------------~~~~~~~~l~~aa----~~~g~v~~~v~-S-~~g~~~~~~~~~~~p~~~~y-~sK~~~  141 (313)
T 1qyd_A           84 LAGGVLS---------------HHILEQLKLVEAI----KEAGNIKRFLP-S-EFGMDPDIMEHALQPGSITF-IDKRKV  141 (313)
T ss_dssp             CCCSSSS---------------TTTTTHHHHHHHH----HHSCCCSEEEC-S-CCSSCTTSCCCCCSSTTHHH-HHHHHH
T ss_pred             Cccccch---------------hhHHHHHHHHHHH----HhcCCCceEEe-c-CCcCCccccccCCCCCcchH-HHHHHH
Confidence            9964321               1566665566554    3444 567874 4 33321      1 1335678 999999


Q ss_pred             HHHHHH
Q 042185          146 HSLTDT  151 (162)
Q Consensus       146 ~~l~~~  151 (162)
                      +.+++.
T Consensus       142 e~~~~~  147 (313)
T 1qyd_A          142 RRAIEA  147 (313)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            988764

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.38  E-value=1.3e-11  Score=90.75  Aligned_cols=122  Identities=15%  Similarity=0.179  Sum_probs=91.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh----hhHHhhh--cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK----ATMADLE--QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~----~~~~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+|+||+++++.|+++|++|++++|+.    ++.+.+.  ....+.++.+|++|.+++.+++++.     .+|+|||++
T Consensus        17 GatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~-----~~d~Vi~~a   91 (346)
T 3i6i_A           17 GATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEH-----EIDIVVSTV   91 (346)
T ss_dssp             CTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHT-----TCCEEEECC
T ss_pred             CCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhC-----CCCEEEECC
Confidence            8999999999999999999999999976    3332221  1357889999999999998888764     789999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEecccccc----CCCCCchhhhHhHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVA----APGPWAGTYTASKAALHSLT  149 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~----~~~~~~~~y~~sKaa~~~l~  149 (162)
                      +..                   |+.+...+++++..    .+ ..++|+ |+....    .+.++...|+.+|..++.+.
T Consensus        92 ~~~-------------------n~~~~~~l~~aa~~----~g~v~~~v~-S~~g~~~~e~~~~~p~~~y~~sK~~~e~~l  147 (346)
T 3i6i_A           92 GGE-------------------SILDQIALVKAMKA----VGTIKRFLP-SEFGHDVNRADPVEPGLNMYREKRRVRQLV  147 (346)
T ss_dssp             CGG-------------------GGGGHHHHHHHHHH----HCCCSEEEC-SCCSSCTTTCCCCTTHHHHHHHHHHHHHHH
T ss_pred             chh-------------------hHHHHHHHHHHHHH----cCCceEEee-cccCCCCCccCcCCCcchHHHHHHHHHHHH
Confidence            861                   77777777777643    33 456664 433221    12245678999999998887


Q ss_pred             HH
Q 042185          150 DT  151 (162)
Q Consensus       150 ~~  151 (162)
                      +.
T Consensus       148 ~~  149 (346)
T 3i6i_A          148 EE  149 (346)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.37  E-value=2.2e-12  Score=95.19  Aligned_cols=112  Identities=18%  Similarity=0.178  Sum_probs=86.0

Q ss_pred             CCCCchHHHHHHHHHHCC-----CeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASD-----CRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g-----~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|+||++++++|+++|     ++|++++|+.+...  .....+.++.+|++|.++++++++..    .++|+|||+|+
T Consensus         8 GatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~~d~vih~a~   81 (364)
T 2v6g_A            8 GVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--HEDNPINYVQCDISDPDDSQAKLSPL----TDVTHVFYVTW   81 (364)
T ss_dssp             TTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--CCSSCCEEEECCTTSHHHHHHHHTTC----TTCCEEEECCC
T ss_pred             CCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--cccCceEEEEeecCCHHHHHHHHhcC----CCCCEEEECCC
Confidence            899999999999999999     99999999865432  12346788999999998887776543    24999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEE-------Eecccccc
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII-------NVGSVTVA  129 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv-------~isS~~~~  129 (162)
                      ...         ++.+..+++|+.++..+++++.+..  .+..++|       ++||...+
T Consensus        82 ~~~---------~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~~~v~~~g~~i~~Ss~~vy  131 (364)
T 2v6g_A           82 ANR---------STEQENCEANSKMFRNVLDAVIPNC--PNLKHISLQTGRKHYMGPFESY  131 (364)
T ss_dssp             CCC---------SSHHHHHHHHHHHHHHHHHHHTTTC--TTCCEEEEECCTHHHHCCGGGT
T ss_pred             CCc---------chHHHHHHHhHHHHHHHHHHHHHhc--cccceEEeccCceEEEechhhc
Confidence            642         2457788999999999999986531  1334666       67876543

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.33  E-value=4.6e-12  Score=92.07  Aligned_cols=119  Identities=13%  Similarity=0.171  Sum_probs=81.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh------hhHHhhh--cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK------ATMADLE--QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~------~~~~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      ||+|+||++++++|+++|++|++++|+.      +..+.+.  ....+.++.+|++|.+++..+++       .+|+|||
T Consensus        11 GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~-------~~d~vi~   83 (321)
T 3c1o_A           11 GGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLK-------QVDIVIS   83 (321)
T ss_dssp             TTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-------TCSEEEE
T ss_pred             cCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHc-------CCCEEEE
Confidence            8999999999999999999999999986      2222221  12468899999999988877764       4799999


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCC---C---CCchhhhHhHHHH
Q 042185           73 NAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAP---G---PWAGTYTASKAAL  145 (162)
Q Consensus        73 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~---~---~~~~~y~~sKaa~  145 (162)
                      +++...                   +.+...++++    +++.+ .++|| . |..+...   .   |....| .+|.++
T Consensus        84 ~a~~~~-------------------~~~~~~l~~a----a~~~g~v~~~v-~-S~~g~~~~~~~~~~p~~~~y-~sK~~~  137 (321)
T 3c1o_A           84 ALPFPM-------------------ISSQIHIINA----IKAAGNIKRFL-P-SDFGCEEDRIKPLPPFESVL-EKKRII  137 (321)
T ss_dssp             CCCGGG-------------------SGGGHHHHHH----HHHHCCCCEEE-C-SCCSSCGGGCCCCHHHHHHH-HHHHHH
T ss_pred             CCCccc-------------------hhhHHHHHHH----HHHhCCccEEe-c-cccccCccccccCCCcchHH-HHHHHH
Confidence            998531                   2233333444    44444 56777 3 4333211   1   124579 999999


Q ss_pred             HHHHHHH
Q 042185          146 HSLTDTL  152 (162)
Q Consensus       146 ~~l~~~l  152 (162)
                      +.+++..
T Consensus       138 e~~~~~~  144 (321)
T 3c1o_A          138 RRAIEAA  144 (321)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHc
Confidence            9888743

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.31  E-value=2.1e-11  Score=94.30  Aligned_cols=127  Identities=19%  Similarity=0.146  Sum_probs=91.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|+||.++++.|+++|++|++++|+.+..+         .+.+|+.+..         .+.+..+|+|||+|+.....
T Consensus       154 GatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~---------~v~~d~~~~~---------~~~l~~~D~Vih~A~~~~~~  215 (516)
T 3oh8_A          154 GSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG---------KRFWDPLNPA---------SDLLDGADVLVHLAGEPIFG  215 (516)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESSSCCTT---------CEECCTTSCC---------TTTTTTCSEEEECCCC----
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc---------ceeecccchh---------HHhcCCCCEEEECCCCcccc
Confidence            89999999999999999999999999876421         2567776431         22345899999999974332


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC-----------CCCchhhhHhHHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP-----------GPWAGTYTASKAALHSLT  149 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~y~~sKaa~~~l~  149 (162)
                         ..+.+..+..+++|+.++..+++++.   ++.+.+++|++||...+.+           .++...|+.+|...+.+.
T Consensus       216 ---~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~~~~~E~~~  289 (516)
T 3oh8_A          216 ---RFNDSHKEAIRESRVLPTKFLAELVA---ESTQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHAT  289 (516)
T ss_dssp             ----CCGGGHHHHHHHTHHHHHHHHHHHH---HCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHHHHHHHHTT
T ss_pred             ---ccchhHHHHHHHHHHHHHHHHHHHHH---hcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHHHHHHHHHH
Confidence               45667788999999999999999743   2344569999999765531           123456888887776654


Q ss_pred             HH
Q 042185          150 DT  151 (162)
Q Consensus       150 ~~  151 (162)
                      +.
T Consensus       290 ~~  291 (516)
T 3oh8_A          290 AP  291 (516)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.31  E-value=2.4e-11  Score=87.68  Aligned_cols=118  Identities=14%  Similarity=0.153  Sum_probs=81.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh------hHHhhh--cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA------TMADLE--QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~------~~~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      ||+|+||+++++.|+++|++|++++|+..      +.+.+.  ....+.++.+|++|.+++..+++       .+|+|||
T Consensus        11 GatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-------~~d~vi~   83 (308)
T 1qyc_A           11 GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-------NVDVVIS   83 (308)
T ss_dssp             STTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-------TCSEEEE
T ss_pred             cCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc-------CCCEEEE
Confidence            89999999999999999999999999742      222111  24568899999999988877765       4799999


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccC-----C-CCCchhhhHhHHHH
Q 042185           73 NAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAA-----P-GPWAGTYTASKAAL  145 (162)
Q Consensus        73 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~-----~-~~~~~~y~~sKaa~  145 (162)
                      +++...                   +.+...++++    +++.+ ..++|+ |+ .+..     + .|....| .+|.++
T Consensus        84 ~a~~~~-------------------~~~~~~l~~a----a~~~g~v~~~v~-S~-~g~~~~~~~~~~p~~~~y-~sK~~~  137 (308)
T 1qyc_A           84 TVGSLQ-------------------IESQVNIIKA----IKEVGTVKRFFP-SE-FGNDVDNVHAVEPAKSVF-EVKAKV  137 (308)
T ss_dssp             CCCGGG-------------------SGGGHHHHHH----HHHHCCCSEEEC-SC-CSSCTTSCCCCTTHHHHH-HHHHHH
T ss_pred             CCcchh-------------------hhhHHHHHHH----HHhcCCCceEee-cc-cccCccccccCCcchhHH-HHHHHH
Confidence            998531                   2233334444    34444 567763 43 3321     1 1224578 999999


Q ss_pred             HHHHHH
Q 042185          146 HSLTDT  151 (162)
Q Consensus       146 ~~l~~~  151 (162)
                      +.+++.
T Consensus       138 e~~~~~  143 (308)
T 1qyc_A          138 RRAIEA  143 (308)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            988775

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.28  E-value=1.2e-11  Score=89.90  Aligned_cols=118  Identities=10%  Similarity=0.194  Sum_probs=80.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh-hHHhhh--cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA-TMADLE--QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~-~~~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      ||+|+||++++++|+++|++|++++|+.+ ..+.+.  ....+.++.+|++|.+++.++++       .+|+|||+++..
T Consensus        18 GatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~-------~~d~vi~~a~~~   90 (318)
T 2r6j_A           18 GGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMK-------KVDVVISALAFP   90 (318)
T ss_dssp             TTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-------TCSEEEECCCGG
T ss_pred             CCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHc-------CCCEEEECCchh
Confidence            89999999999999999999999999864 222111  12457889999999988877764       479999999853


Q ss_pred             CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCC---C---CCchhhhHhHHHHHHHHH
Q 042185           78 CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAP---G---PWAGTYTASKAALHSLTD  150 (162)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~---~---~~~~~y~~sKaa~~~l~~  150 (162)
                      .                   +.+...++++    +++.+ ..++|+ |+ .+...   .   |....| .+|.+++.+++
T Consensus        91 ~-------------------~~~~~~l~~a----a~~~g~v~~~v~-S~-~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~  144 (318)
T 2r6j_A           91 Q-------------------ILDQFKILEA----IKVAGNIKRFLP-SD-FGVEEDRINALPPFEALI-ERKRMIRRAIE  144 (318)
T ss_dssp             G-------------------STTHHHHHHH----HHHHCCCCEEEC-SC-CSSCTTTCCCCHHHHHHH-HHHHHHHHHHH
T ss_pred             h-------------------hHHHHHHHHH----HHhcCCCCEEEe-ec-cccCcccccCCCCcchhH-HHHHHHHHHHH
Confidence            1                   2233333343    44444 567763 43 33211   1   123468 99999998876


Q ss_pred             H
Q 042185          151 T  151 (162)
Q Consensus       151 ~  151 (162)
                      .
T Consensus       145 ~  145 (318)
T 2r6j_A          145 E  145 (318)
T ss_dssp             H
T ss_pred             h
Confidence            4

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.17  E-value=2.3e-12  Score=92.73  Aligned_cols=95  Identities=17%  Similarity=0.182  Sum_probs=70.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC----CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD----PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+||+|++++..|+++|++|++++|+.++.+++.++    ..+.+..+|++++++++++++       .+|++|||+|.
T Consensus       126 GaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~DvlVn~ag~  198 (287)
T 1lu9_A          126 AGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVK-------GAHFVFTAGAI  198 (287)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTT-------TCSEEEECCCT
T ss_pred             CCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHH-------hCCEEEECCCc
Confidence            7899999999999999999999999998776655432    245678899999987766554       37999999986


Q ss_pred             CCC-CCCCCCCh-HHHHHHHHhhhhhHH
Q 042185           77 QCV-GPLAEVPL-SAMEQTFNTNVFGPM  102 (162)
Q Consensus        77 ~~~-~~~~~~~~-~~~~~~~~~n~~~~~  102 (162)
                      ... .+..+.+. +.|+..+++|+.+++
T Consensus       199 g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          199 GLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             TCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             cccCCChhHcCchHHHHHHHHhhhhhhH
Confidence            422 22222332 555667888888776

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=98.97  E-value=4.7e-08  Score=70.21  Aligned_cols=107  Identities=20%  Similarity=0.183  Sum_probs=75.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|.||++++++|.++|++|+.+.|++...       .   +..|     .+      ..+....+|.+||+++.....
T Consensus         7 GatGfIG~~L~~~L~~~G~~V~~l~R~~~~~-------~---~~~~-----~~------~~~~l~~~d~vihla~~~i~~   65 (298)
T 4b4o_A            7 GGTGFIGTALTQLLNARGHEVTLVSRKPGPG-------R---ITWD-----EL------AASGLPSCDAAVNLAGENILN   65 (298)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-------E---EEHH-----HH------HHHCCCSCSEEEECCCCCSSC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCCCcC-------e---eecc-----hh------hHhhccCCCEEEEeccCcccc
Confidence            8999999999999999999999999975321       1   1111     11      122346899999999865444


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA  130 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  130 (162)
                      +...++.+..+..++.|+.++..+.+.+...  ..+...+|+.||...+.
T Consensus        66 ~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~--~~~~~~~i~~Ss~~vyg  113 (298)
T 4b4o_A           66 PLRRWNETFQKEVLGSRLETTQLLAKAITKA--PQPPKAWVLVTGVAYYQ  113 (298)
T ss_dssp             TTSCCCHHHHHHHHHHHHHHHHHHHHHHHHC--SSCCSEEEEEEEGGGSC
T ss_pred             hhhhhhhhhhhhhhhHHHHHHHHHHHHHHHh--CCCceEEEEEeeeeeec
Confidence            5556778888889999999888777765331  22344577777765543

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.93  E-value=2.7e-09  Score=70.03  Aligned_cols=74  Identities=15%  Similarity=0.117  Sum_probs=60.5

Q ss_pred             CCchHHHHHHHHHHCCCeEEEEecChhhHH-------hhh-cCCceeEEEeccCCh--HHHHHHHHHHHHHcCCccEEEE
Q 042185            3 QGGIGHALARAFAASDCRVVATGRSKATMA-------DLE-QDPRFFVQELDVLSE--QSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~~vi~~~r~~~~~~-------~~~-~~~~~~~~~~D~~~~--~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      ++-++.++++.|++.|++|++..|+.+...       .+. .+.....+.+|++++  ++++++++.+.+.+|+ |++||
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVn  103 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVH  103 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEE
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEE
Confidence            456889999999999999999988654321       222 245677888999999  9999999999998999 99999


Q ss_pred             CCCCC
Q 042185           73 NAGVQ   77 (162)
Q Consensus        73 ~ag~~   77 (162)
                      |+|+.
T Consensus       104 nAgg~  108 (157)
T 3gxh_A          104 CLANY  108 (157)
T ss_dssp             CSBSH
T ss_pred             CCCCC
Confidence            99963

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=98.88  E-value=6.9e-09  Score=75.82  Aligned_cols=140  Identities=14%  Similarity=0.057  Sum_probs=93.3

Q ss_pred             CCCCchHHHHHHHHHHCCC-------eEEEEecCh--hhHH----hhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCc
Q 042185            1 CSQGGIGHALARAFAASDC-------RVVATGRSK--ATMA----DLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKI   67 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-------~vi~~~r~~--~~~~----~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i   67 (162)
                      ||+|.||.+++..|+++|.       +|+++|++.  +..+    ++.. ..+.+. .|+.+.+++...+       ...
T Consensus        11 GaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~-~~~~~~-~di~~~~~~~~a~-------~~~   81 (327)
T 1y7t_A           11 GAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELED-CAFPLL-AGLEATDDPKVAF-------KDA   81 (327)
T ss_dssp             STTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT-TTCTTE-EEEEEESCHHHHT-------TTC
T ss_pred             CCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhc-cccccc-CCeEeccChHHHh-------CCC
Confidence            7899999999999999986       799999874  2111    1211 112222 4666544444332       367


Q ss_pred             cEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccc--------cC-CCCCchhh
Q 042185           68 DVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTV--------AA-PGPWAGTY  138 (162)
Q Consensus        68 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~--------~~-~~~~~~~y  138 (162)
                      |+|||+||.... +  ..+   ....+++|+.++..+++.+...-  ..+++++++|+...        .. +.++...|
T Consensus        82 D~Vih~Ag~~~~-~--~~~---~~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~y  153 (327)
T 1y7t_A           82 DYALLVGAAPRK-A--GME---RRDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPANTNALIAYKNAPGLNPRNFT  153 (327)
T ss_dssp             SEEEECCCCCCC-T--TCC---HHHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEE
T ss_pred             CEEEECCCcCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCchhhhHHHHHHHcCCCChhhee
Confidence            999999997432 1  222   35678999999998888875421  13458888887541        11 24455679


Q ss_pred             hHhHHHHHHHHHHHHHHhc
Q 042185          139 TASKAALHSLTDTLRLELG  157 (162)
Q Consensus       139 ~~sKaa~~~l~~~l~~e~~  157 (162)
                      +.+|...+.+.+.++..++
T Consensus       154 g~tkl~~er~~~~~a~~~g  172 (327)
T 1y7t_A          154 AMTRLDHNRAKAQLAKKTG  172 (327)
T ss_dssp             ECCHHHHHHHHHHHHHHHT
T ss_pred             ccchHHHHHHHHHHHHHhC
Confidence            9999999998888877653

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.83  E-value=1.8e-08  Score=62.32  Aligned_cols=66  Identities=23%  Similarity=0.339  Sum_probs=55.7

Q ss_pred             CCCCchHHHHHHHHHHCC-CeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASD-CRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g-~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |+ |++|.++++.|.++| ++|++++|++++.+.+. ...+.+..+|+++.++++.++       ..+|++|++++
T Consensus        12 G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~-------~~~d~vi~~~~   78 (118)
T 3ic5_A           12 GA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-RMGVATKQVDAKDEAGLAKAL-------GGFDAVISAAP   78 (118)
T ss_dssp             CC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-TTTCEEEECCTTCHHHHHHHT-------TTCSEEEECSC
T ss_pred             CC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hCCCcEEEecCCCHHHHHHHH-------cCCCEEEECCC
Confidence            66 999999999999999 79999999998877765 456678889999987766654       37899999996

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.75  E-value=2.8e-08  Score=68.69  Aligned_cols=70  Identities=20%  Similarity=0.282  Sum_probs=51.8

Q ss_pred             CCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCCC
Q 042185            3 QGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGP   81 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~   81 (162)
                      ||+||.++|+.|+++|++|++++++.. ++ .  ...  .-.+|+++.   +.+++.+.+.++++|++|+|||+....+
T Consensus        33 Sg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-~--~~g--~~~~dv~~~---~~~~~~v~~~~~~~Dili~~Aav~d~~p  102 (226)
T 1u7z_A           33 SGKMGFAIAAAAARRGANVTLVSGPVS-LP-T--PPF--VKRVDVMTA---LEMEAAVNASVQQQNIFIGCAAVADYRA  102 (226)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEECSCC-CC-C--CTT--EEEEECCSH---HHHHHHHHHHGGGCSEEEECCBCCSEEE
T ss_pred             ccHHHHHHHHHHHHCCCEEEEEECCcc-cc-c--CCC--CeEEccCcH---HHHHHHHHHhcCCCCEEEECCcccCCCC
Confidence            689999999999999999999988652 11 1  111  234677664   4566777788899999999999864433

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.67  E-value=1.3e-08  Score=70.58  Aligned_cols=73  Identities=16%  Similarity=0.315  Sum_probs=52.7

Q ss_pred             CCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCCCC
Q 042185            3 QGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPL   82 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~   82 (162)
                      ||++|.++|+.|+++|++|++++|+... ... ....     +|+.+.++.+.+++.+.+.+++.|++|+||++....+.
T Consensus        28 SG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~~~-~~~~-----~~~~~v~s~~em~~~v~~~~~~~Dili~aAAvsD~~p~  100 (232)
T 2gk4_A           28 TGHLGKIITETLLSAGYEVCLITTKRAL-KPE-PHPN-----LSIREITNTKDLLIEMQERVQDYQVLIHSMAVSDYTPV  100 (232)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEECTTSC-CCC-CCTT-----EEEEECCSHHHHHHHHHHHGGGCSEEEECSBCCSEEEE
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEeCCccc-ccc-CCCC-----eEEEEHhHHHHHHHHHHHhcCCCCEEEEcCccccccch
Confidence            6779999999999999999999997532 110 0112     23333446677777788888999999999998654443

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.61  E-value=1.2e-07  Score=71.29  Aligned_cols=70  Identities=19%  Similarity=0.302  Sum_probs=60.2

Q ss_pred             CCCCchHHHHHHHHHHCC---CeEEEEecChhhHHhhhcC------CceeEEEeccCChHHHHHHHHHHHHHcCCccEEE
Q 042185            1 CSQGGIGHALARAFAASD---CRVVATGRSKATMADLEQD------PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLV   71 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g---~~vi~~~r~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi   71 (162)
                      |+ |+||+++++.|+++|   ..|++++|+.++.+++.++      ..+..+.+|+++.+++++++++.     ++|+||
T Consensus         8 Ga-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----~~DvVi   81 (405)
T 4ina_A            8 GA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----KPQIVL   81 (405)
T ss_dssp             CC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             CC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----CCCEEE
Confidence            66 899999999999998   4899999999887766542      25788999999999999998886     789999


Q ss_pred             ECCCC
Q 042185           72 NNAGV   76 (162)
Q Consensus        72 ~~ag~   76 (162)
                      +|++.
T Consensus        82 n~ag~   86 (405)
T 4ina_A           82 NIALP   86 (405)
T ss_dssp             ECSCG
T ss_pred             ECCCc
Confidence            99985

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.49  E-value=6.1e-07  Score=68.25  Aligned_cols=68  Identities=15%  Similarity=0.163  Sum_probs=56.2

Q ss_pred             CCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCC-ceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            3 QGGIGHALARAFAASDCRVVATGRSKATMADLEQDP-RFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      +|++|+++++.|++.|++|++++|+.++.+++.... .+..+.+|+++.+++++++.       .+|+|||+++..
T Consensus        11 aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~-------~~DvVIn~a~~~   79 (450)
T 1ff9_A           11 SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVA-------KHDLVISLIPYT   79 (450)
T ss_dssp             CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHT-------TSSEEEECCC--
T ss_pred             CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHc-------CCcEEEECCccc
Confidence            799999999999999999999999988877766543 36788899999887776652       689999999863

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.46  E-value=3.8e-07  Score=67.03  Aligned_cols=96  Identities=16%  Similarity=0.176  Sum_probs=67.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      |++|+||..+++.+...|++|++++++.++++.+.+-. .. ..+|+++.+++...+.++..  +.+|++|+++|..   
T Consensus       177 Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g-~~-~~~d~~~~~~~~~~~~~~~~--~~~D~vi~~~g~~---  249 (347)
T 2hcy_A          177 GAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIG-GE-VFIDFTKEKDIVGAVLKATD--GGAHGVINVSVSE---  249 (347)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTT-CC-EEEETTTCSCHHHHHHHHHT--SCEEEEEECSSCH---
T ss_pred             CCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcC-Cc-eEEecCccHhHHHHHHHHhC--CCCCEEEECCCcH---
Confidence            78899999999999999999999999888776554422 22 23588765666666666543  2799999999841   


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccc
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVT  127 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~  127 (162)
                             +               .++..++.+  +++|++|.+++..
T Consensus       250 -------~---------------~~~~~~~~l--~~~G~iv~~g~~~  272 (347)
T 2hcy_A          250 -------A---------------AIEASTRYV--RANGTTVLVGMPA  272 (347)
T ss_dssp             -------H---------------HHHHHTTSE--EEEEEEEECCCCT
T ss_pred             -------H---------------HHHHHHHHH--hcCCEEEEEeCCC
Confidence                   1               234445555  3357899887654

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.42  E-value=7.6e-07  Score=60.18  Aligned_cols=95  Identities=23%  Similarity=0.195  Sum_probs=64.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+||||.++++.+...|++|+++++++++.+.+.+.. .. ..+|.++.+..+.+.+...  .+.+|++|+|+|.    
T Consensus        46 Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g-~~-~~~d~~~~~~~~~~~~~~~--~~~~D~vi~~~g~----  117 (198)
T 1pqw_A           46 SATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLG-VE-YVGDSRSVDFADEILELTD--GYGVDVVLNSLAG----  117 (198)
T ss_dssp             TTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTC-CS-EEEETTCSTHHHHHHHHTT--TCCEEEEEECCCT----
T ss_pred             eCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcC-CC-EEeeCCcHHHHHHHHHHhC--CCCCeEEEECCch----
Confidence            78999999999999999999999999988776654422 22 2357777654444433321  1369999999972    


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccc
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVT  127 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~  127 (162)
                             +.               .+..++.++  ++|++|++++..
T Consensus       118 -------~~---------------~~~~~~~l~--~~G~~v~~g~~~  140 (198)
T 1pqw_A          118 -------EA---------------IQRGVQILA--PGGRFIELGKKD  140 (198)
T ss_dssp             -------HH---------------HHHHHHTEE--EEEEEEECSCGG
T ss_pred             -------HH---------------HHHHHHHhc--cCCEEEEEcCCC
Confidence                   11               234444453  458999998754

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.40  E-value=4.9e-07  Score=67.08  Aligned_cols=97  Identities=13%  Similarity=0.118  Sum_probs=63.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC-C
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC-V   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~-~   79 (162)
                      |+ |+||+.+++.+...|++|++++|+.++++.+.+..... +.+|.++.++++..+.       ..|++|++++... .
T Consensus       173 Ga-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~-~~~~~~~~~~l~~~~~-------~~DvVi~~~g~~~~~  243 (369)
T 2eez_A          173 GG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGR-VITLTATEANIKKSVQ-------HADLLIGAVLVPGAK  243 (369)
T ss_dssp             CC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS-EEEEECCHHHHHHHHH-------HCSEEEECCC-----
T ss_pred             CC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCce-EEEecCCHHHHHHHHh-------CCCEEEECCCCCccc
Confidence            55 89999999999999999999999988777664422222 4567777777666543       5799999998642 1


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccc
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTV  128 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~  128 (162)
                      .+                    ..+.+..++.|+  +++.||++++..+
T Consensus       244 ~~--------------------~li~~~~l~~mk--~gg~iV~v~~~~g  270 (369)
T 2eez_A          244 AP--------------------KLVTRDMLSLMK--EGAVIVDVAVDQG  270 (369)
T ss_dssp             ----------------------CCSCHHHHTTSC--TTCEEEECC----
T ss_pred             cc--------------------hhHHHHHHHhhc--CCCEEEEEecCCC
Confidence            11                    112345555563  4678999987643

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.35  E-value=1.1e-06  Score=64.16  Aligned_cols=71  Identities=21%  Similarity=0.353  Sum_probs=54.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+||||..+++.+...|++|++++++.++++.+..-. .. ..+|.++.+++.+.+.+...  +.+|++|+|+|
T Consensus       153 Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g-~~-~~~d~~~~~~~~~~~~~~~~--~~~d~vi~~~g  223 (333)
T 1v3u_A          153 AAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIG-FD-AAFNYKTVNSLEEALKKASP--DGYDCYFDNVG  223 (333)
T ss_dssp             STTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT-CS-EEEETTSCSCHHHHHHHHCT--TCEEEEEESSC
T ss_pred             cCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcC-Cc-EEEecCCHHHHHHHHHHHhC--CCCeEEEECCC
Confidence            78899999999999999999999999988777664322 22 23588774556555555433  57999999998

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.30  E-value=2.6e-06  Score=65.08  Aligned_cols=69  Identities=23%  Similarity=0.274  Sum_probs=55.9

Q ss_pred             CCCCchHHHHHHHHHHC-CCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFAAS-DCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      |+ |++|++++..|++. |++|++++|+.++.+++.+...+..+.+|+++.+++..++.       ..|+||++++..
T Consensus        30 GA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~-------~~DvVIn~tp~~   99 (467)
T 2axq_A           30 GS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLA-------DNDVVISLIPYT   99 (467)
T ss_dssp             CC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHH-------TSSEEEECSCGG
T ss_pred             CC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHc-------CCCEEEECCchh
Confidence            54 99999999999998 67999999998887776544345677899999887766553       679999999863

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.30  E-value=3.3e-06  Score=53.89  Aligned_cols=67  Identities=19%  Similarity=0.270  Sum_probs=54.6

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |.|.+|..+++.|.++|++|++++++++..+.+.+. ...++.+|.++++.++.+      ...+.|.+|.+.+
T Consensus        13 G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~-~~~~~~gd~~~~~~l~~~------~~~~~d~vi~~~~   79 (141)
T 3llv_A           13 GSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE-GFDAVIADPTDESFYRSL------DLEGVSAVLITGS   79 (141)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-TCEEEECCTTCHHHHHHS------CCTTCSEEEECCS
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC-CCcEEECCCCCHHHHHhC------CcccCCEEEEecC
Confidence            357899999999999999999999999988877654 467788999998866543      2247899998876

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.25  E-value=1.8e-07  Score=72.47  Aligned_cols=90  Identities=19%  Similarity=0.195  Sum_probs=61.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC-
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV-   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~-   79 (162)
                      || ||+|++++..|+++|++|++++|+.++.+++.++......  ++.+   ++    +.  ..+.+|++|||+|.... 
T Consensus       371 Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~~~~--~~~d---l~----~~--~~~~~DilVN~agvg~~~  438 (523)
T 2o7s_A          371 GA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKAL--SLTD---LD----NY--HPEDGMVLANTTSMGMQP  438 (523)
T ss_dssp             CC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC-CE--ETTT---TT----TC----CCSEEEEECSSTTCTT
T ss_pred             CC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCcee--eHHH---hh----hc--cccCceEEEECCCCCCCC
Confidence            55 6999999999999999999999998887776543322222  2222   10    00  12358999999997532 


Q ss_pred             ----CCCCCCChHHHHHHHHhhhhhHH
Q 042185           80 ----GPLAEVPLSAMEQTFNTNVFGPM  102 (162)
Q Consensus        80 ----~~~~~~~~~~~~~~~~~n~~~~~  102 (162)
                          .++.+.+.+.|...+++|+.+..
T Consensus       439 ~~~~~~~~~~~~~~~~~v~Dvny~p~~  465 (523)
T 2o7s_A          439 NVEETPISKDALKHYALVFDAVYTPRI  465 (523)
T ss_dssp             CTTCCSSCTTTGGGEEEEEECCCSSSS
T ss_pred             CCCCCCCChHHcCcCcEEEEEeeCCcc
Confidence                35666677888899999998763

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.25  E-value=3.2e-09  Score=80.78  Aligned_cols=32  Identities=22%  Similarity=0.299  Sum_probs=27.8

Q ss_pred             CCchHHHHHHHHHHCCCeEEEEecChhhHHhh
Q 042185            3 QGGIGHALARAFAASDCRVVATGRSKATMADL   34 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~   34 (162)
                      .|+||+++|+.|...|++|+++++++....+.
T Consensus       273 aGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~A  304 (488)
T 3ond_A          273 YGDVGKGCAAALKQAGARVIVTEIDPICALQA  304 (488)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            45999999999999999999999998765544

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.20  E-value=4.4e-06  Score=53.15  Aligned_cols=68  Identities=9%  Similarity=0.148  Sum_probs=52.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+ |.+|..+++.|.+.|++|++++++++..+.+... ...++.+|.++.+.++.+      .....|++|.+++.
T Consensus        13 G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~-~~~~~~~d~~~~~~l~~~------~~~~~d~vi~~~~~   80 (144)
T 2hmt_A           13 GL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASY-ATHAVIANATEENELLSL------GIRNFEYVIVAIGA   80 (144)
T ss_dssp             CC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTT-CSEEEECCTTCHHHHHTT------TGGGCSEEEECCCS
T ss_pred             CC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-CCEEEEeCCCCHHHHHhc------CCCCCCEEEECCCC
Confidence            54 9999999999999999999999998877766543 345677898886554332      13478999999874

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.09  E-value=6.4e-06  Score=60.33  Aligned_cols=72  Identities=21%  Similarity=0.359  Sum_probs=53.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |++|+||..+++.+...|++|++++++.++++.+.++.... ..+|.++.+++...+.++..  +.+|++|+|+|
T Consensus       163 Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~~~~~~~~--~~~d~vi~~~g  234 (345)
T 2j3h_A          163 AASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFD-DAFNYKEESDLTAALKRCFP--NGIDIYFENVG  234 (345)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCS-EEEETTSCSCSHHHHHHHCT--TCEEEEEESSC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCc-eEEecCCHHHHHHHHHHHhC--CCCcEEEECCC
Confidence            77899999999999999999999999988887775322222 22477665455555554432  47999999998

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.06  E-value=1.1e-05  Score=58.89  Aligned_cols=72  Identities=14%  Similarity=0.159  Sum_probs=51.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|+||.++++.+...|++|++++++.++++.+.+-. .. ..+|.++.+..+.+.+...  ...+|++|+|+|.
T Consensus       153 Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g-~~-~~~d~~~~~~~~~i~~~~~--~~~~d~vi~~~g~  224 (333)
T 1wly_A          153 AAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLG-CH-HTINYSTQDFAEVVREITG--GKGVDVVYDSIGK  224 (333)
T ss_dssp             TTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHT-CS-EEEETTTSCHHHHHHHHHT--TCCEEEEEECSCT
T ss_pred             CCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC-CC-EEEECCCHHHHHHHHHHhC--CCCCeEEEECCcH
Confidence            78899999999999999999999999987776654322 11 2347766554444433321  1369999999984

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.03  E-value=1.2e-05  Score=59.30  Aligned_cols=71  Identities=20%  Similarity=0.266  Sum_probs=51.0

Q ss_pred             CCCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|+||..+++.+...|+ +|++++++.++++.+..+.... ..+|.++.+ +...+.+...  +.+|++|+|+|
T Consensus       168 GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~-~~~d~~~~~-~~~~~~~~~~--~~~d~vi~~~G  239 (357)
T 2zb4_A          168 GAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFD-AAINYKKDN-VAEQLRESCP--AGVDVYFDNVG  239 (357)
T ss_dssp             STTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCS-EEEETTTSC-HHHHHHHHCT--TCEEEEEESCC
T ss_pred             CCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-eEEecCchH-HHHHHHHhcC--CCCCEEEECCC
Confidence            7889999999999999999 9999999988877765432222 235776643 3333333221  26999999998

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.00  E-value=8.6e-06  Score=59.24  Aligned_cols=71  Identities=15%  Similarity=0.178  Sum_probs=51.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|+||..+++.+...|++|+++++++++++.+.+.. .. ..+|.++.+..+.+.+...  ...+|++|+|+|
T Consensus       148 Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g-~~-~~~~~~~~~~~~~~~~~~~--~~~~D~vi~~~g  218 (327)
T 1qor_A          148 AAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAG-AW-QVINYREEDLVERLKEITG--GKKVRVVYDSVG  218 (327)
T ss_dssp             STTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHT-CS-EEEETTTSCHHHHHHHHTT--TCCEEEEEECSC
T ss_pred             CCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcC-CC-EEEECCCccHHHHHHHHhC--CCCceEEEECCc
Confidence            68999999999999999999999999988776664422 11 2357766554444433321  136999999998

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.98  E-value=2.3e-05  Score=57.16  Aligned_cols=72  Identities=21%  Similarity=0.246  Sum_probs=51.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |++|+||..+++.+...|++|+++++++++++.+..+..... .+|.++.+..+.+. +..  .+.+|++|+|+|.
T Consensus       157 Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~-~~~--~~~~d~vi~~~g~  228 (336)
T 4b7c_A          157 GAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDG-AIDYKNEDLAAGLK-REC--PKGIDVFFDNVGG  228 (336)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSE-EEETTTSCHHHHHH-HHC--TTCEEEEEESSCH
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCE-EEECCCHHHHHHHH-Hhc--CCCceEEEECCCc
Confidence            788999999999999999999999999988887733322222 24666644333333 222  2479999999983

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.97  E-value=4.1e-05  Score=48.34  Aligned_cols=68  Identities=15%  Similarity=0.233  Sum_probs=52.2

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |.|.+|..+++.|.+.|++|++++++++..+.+..+....++..|.++.+.+..      ....+.|.+|.+.+
T Consensus        11 G~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~------~~~~~~d~vi~~~~   78 (140)
T 1lss_A           11 GIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLED------AGIEDADMYIAVTG   78 (140)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHH------TTTTTCSEEEECCS
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHH------cCcccCCEEEEeeC
Confidence            358999999999999999999999998887766544455677788887665432      11347899999975

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.96  E-value=8.1e-06  Score=58.03  Aligned_cols=67  Identities=18%  Similarity=0.268  Sum_probs=46.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      |+ ||+|++++..|++.|++|++++|+.++.+++.++..... .++..+.+++       .+  +..|++|++++...
T Consensus       126 Ga-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~-~~~~~~~~~~-------~~--~~~DivVn~t~~~~  192 (271)
T 1nyt_A          126 GA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQALSMDEL-------EG--HEFDLIINATSSGI  192 (271)
T ss_dssp             CC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEEECCSGGG-------TT--CCCSEEEECCSCGG
T ss_pred             CC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC-CeeEecHHHh-------cc--CCCCEEEECCCCCC
Confidence            44 799999999999999999999999887766654321100 1223332222       11  68999999999753

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.90  E-value=4.8e-05  Score=55.95  Aligned_cols=71  Identities=14%  Similarity=0.185  Sum_probs=50.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|++|..+++.+...|++|+++++++++++.+.+-. .. ..+|.++.+..+.+.+.. . ...+|++|+|+|
T Consensus       178 GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g-a~-~~~d~~~~~~~~~~~~~~-~-~~~~D~vi~~~G  248 (351)
T 1yb5_A          178 GASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNG-AH-EVFNHREVNYIDKIKKYV-G-EKGIDIIIEMLA  248 (351)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT-CS-EEEETTSTTHHHHHHHHH-C-TTCEEEEEESCH
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcC-CC-EEEeCCCchHHHHHHHHc-C-CCCcEEEEECCC
Confidence            78899999999999999999999999988777554422 22 235776654333333222 1 127999999998

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.90  E-value=2.6e-05  Score=57.39  Aligned_cols=72  Identities=13%  Similarity=0.099  Sum_probs=50.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|+||..++..+...|++|+++++++++++.+.+-. .. ..+|.++.+..+.+.+...  ...+|++|+|+|.
T Consensus       170 Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g-~~-~~~~~~~~~~~~~~~~~~~--~~~~d~vi~~~G~  241 (354)
T 2j8z_A          170 AGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLG-AA-AGFNYKKEDFSEATLKFTK--GAGVNLILDCIGG  241 (354)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-CS-EEEETTTSCHHHHHHHHTT--TSCEEEEEESSCG
T ss_pred             CCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcC-Cc-EEEecCChHHHHHHHHHhc--CCCceEEEECCCc
Confidence            68999999999999999999999999988777664322 12 2357666544433332221  1369999999984

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.88  E-value=6.3e-05  Score=47.96  Aligned_cols=68  Identities=18%  Similarity=0.167  Sum_probs=54.5

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |.|.+|..+++.|.+.|+.|++++++++..+.+.+ ..+.++..|.++++.++.+      ...+.|.+|.+.+.
T Consensus        14 G~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~-~g~~~i~gd~~~~~~l~~a------~i~~ad~vi~~~~~   81 (140)
T 3fwz_A           14 GYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRE-RGVRAVLGNAANEEIMQLA------HLECAKWLILTIPN   81 (140)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-TTCEEEESCTTSHHHHHHT------TGGGCSEEEECCSC
T ss_pred             CcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-cCCCEEECCCCCHHHHHhc------CcccCCEEEEECCC
Confidence            46889999999999999999999999998887765 4567788999998765543      12367888888763

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.87  E-value=2.1e-06  Score=61.52  Aligned_cols=66  Identities=15%  Similarity=0.252  Sum_probs=47.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCce-----eEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRF-----FVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~-----~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |++ |+|++++..|++.| +|++++|+.++.+++.++...     ..+.+|+++.          .+.++++|++|+|+|
T Consensus       135 GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~~~~~DilVn~ag  202 (287)
T 1nvt_A          135 GAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVDLDGVDIIINATP  202 (287)
T ss_dssp             CCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCCCTTCCEEEECSC
T ss_pred             Cch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHhhCCCCEEEECCC
Confidence            554 99999999999999 999999998876665432110     0123455442          345678999999999


Q ss_pred             CCC
Q 042185           76 VQC   78 (162)
Q Consensus        76 ~~~   78 (162)
                      ...
T Consensus       203 ~~~  205 (287)
T 1nvt_A          203 IGM  205 (287)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            754

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.86  E-value=7.4e-05  Score=56.68  Aligned_cols=76  Identities=20%  Similarity=0.192  Sum_probs=52.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEE---eccC---------ChHHHHHHHHHHHHHcC-Cc
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQE---LDVL---------SEQSVQNVLSNVLEKFG-KI   67 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~---~D~~---------~~~~i~~~~~~~~~~~~-~i   67 (162)
                      ||+|+||...+..+...|++|++++++.++++.+.+-..-.++.   .|+.         +.++++.+.+.+.+..+ .+
T Consensus       228 GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~  307 (447)
T 4a0s_A          228 GASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREP  307 (447)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred             CCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCc
Confidence            67899999999999999999999999988877765532222221   1221         12344555566655544 69


Q ss_pred             cEEEECCCC
Q 042185           68 DVLVNNAGV   76 (162)
Q Consensus        68 d~vi~~ag~   76 (162)
                      |++|.++|.
T Consensus       308 Dvvid~~G~  316 (447)
T 4a0s_A          308 DIVFEHTGR  316 (447)
T ss_dssp             SEEEECSCH
T ss_pred             eEEEECCCc
Confidence            999999983

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.84  E-value=5.7e-05  Score=55.55  Aligned_cols=71  Identities=18%  Similarity=0.121  Sum_probs=51.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|+||..++..+...|++|+++++++++++.+.+-..-..  +|.++.+..+.+ .+..  .+.+|++|.|+|.
T Consensus       175 Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~--~~~~~~~~~~~~-~~~~--~~g~Dvvid~~g~  245 (353)
T 4dup_A          175 GGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRG--INYRSEDFAAVI-KAET--GQGVDIILDMIGA  245 (353)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEE--EETTTSCHHHHH-HHHH--SSCEEEEEESCCG
T ss_pred             cCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEE--EeCCchHHHHHH-HHHh--CCCceEEEECCCH
Confidence            789999999999999999999999999988776654222222  455554433333 3332  4579999999984

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=97.84  E-value=4.9e-05  Score=55.49  Aligned_cols=139  Identities=12%  Similarity=0.033  Sum_probs=84.5

Q ss_pred             CCCCchHHHHHHHHHHCCC-------eEEEEecC----hhhHHh----hhcC-CceeEEEeccCChHHHHHHHHHHHHHc
Q 042185            1 CSQGGIGHALARAFAASDC-------RVVATGRS----KATMAD----LEQD-PRFFVQELDVLSEQSVQNVLSNVLEKF   64 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-------~vi~~~r~----~~~~~~----~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~   64 (162)
                      ||+|.+|.+++..|+.+|.       +|+++|++    .++.+.    +.+. ...   ..|+...++....       +
T Consensus        12 GaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~---~~~i~~~~~~~~a-------l   81 (329)
T 1b8p_A           12 GAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL---LAGMTAHADPMTA-------F   81 (329)
T ss_dssp             STTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT---EEEEEEESSHHHH-------T
T ss_pred             CCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc---cCcEEEecCcHHH-------h
Confidence            7789999999999999885       79999998    443332    2221 122   1344433333333       3


Q ss_pred             CCccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccc--------cC-CCCCc
Q 042185           65 GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTV--------AA-PGPWA  135 (162)
Q Consensus        65 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~--------~~-~~~~~  135 (162)
                      ..-|+||+++|....   ...+.+   ..+..|+.....+++.+.++-  ..++.+|++|....        .. +.|..
T Consensus        82 ~~aD~Vi~~ag~~~~---~g~~r~---dl~~~N~~i~~~i~~~i~~~~--~p~a~ii~~SNPv~~~t~~~~~~~~~~p~~  153 (329)
T 1b8p_A           82 KDADVALLVGARPRG---PGMERK---DLLEANAQIFTVQGKAIDAVA--SRNIKVLVVGNPANTNAYIAMKSAPSLPAK  153 (329)
T ss_dssp             TTCSEEEECCCCCCC---TTCCHH---HHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHTCTTSCGG
T ss_pred             CCCCEEEEeCCCCCC---CCCCHH---HHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccCchHHHHHHHHHHcCCCCHH
Confidence            356999999996432   123333   456778887777776654421  14578999987442        12 33454


Q ss_pred             hhhhHhHHHHHHHHHHHHHHhc
Q 042185          136 GTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus       136 ~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                      ..|+.++.-...+...++..++
T Consensus       154 ~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          154 NFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             GEEECCHHHHHHHHHHHHHHHT
T ss_pred             HEEEeecHHHHHHHHHHHHHhC
Confidence            5677776555556666666553

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.82  E-value=7.5e-05  Score=48.37  Aligned_cols=68  Identities=16%  Similarity=0.199  Sum_probs=51.0

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |.|.+|..+++.|.+.|++|++++|+++..+.+.......++..|.++.+.+...      .....|.+|.+.+
T Consensus        26 G~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~------~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           26 GCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKEC------GMEKADMVFAFTN   93 (155)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTT------TGGGCSEEEECSS
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHc------CcccCCEEEEEeC
Confidence            4689999999999999999999999998877765233455677788776543321      1236799999887

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.76  E-value=4.6e-05  Score=55.86  Aligned_cols=72  Identities=8%  Similarity=0.187  Sum_probs=49.8

Q ss_pred             CCCCchHHHHHHHHHHC-CCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAAS-DCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |++|+||..+++.+... |++|+++++++++++.+.+-. .. ..+|.++.+..+.+ .++... +.+|++|+++|.
T Consensus       178 Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g-~~-~~~~~~~~~~~~~~-~~~~~~-~~~d~vi~~~g~  250 (347)
T 1jvb_A          178 GAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAG-AD-YVINASMQDPLAEI-RRITES-KGVDAVIDLNNS  250 (347)
T ss_dssp             TTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHT-CS-EEEETTTSCHHHHH-HHHTTT-SCEEEEEESCCC
T ss_pred             CCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhC-CC-EEecCCCccHHHHH-HHHhcC-CCceEEEECCCC
Confidence            77889999999999998 999999999988777664322 11 22466654433322 222111 589999999985

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.70  E-value=0.00013  Score=53.36  Aligned_cols=71  Identities=14%  Similarity=0.098  Sum_probs=49.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |++|++|..+++.+...|++|+.+++++++++.+..-. ... .+|.++.+ +...+.+... ...+|++|+++|
T Consensus       174 Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g-a~~-~~d~~~~~-~~~~~~~~~~-~~~~d~vi~~~g  244 (343)
T 2eih_A          174 AAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALG-ADE-TVNYTHPD-WPKEVRRLTG-GKGADKVVDHTG  244 (343)
T ss_dssp             STTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHT-CSE-EEETTSTT-HHHHHHHHTT-TTCEEEEEESSC
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcC-CCE-EEcCCccc-HHHHHHHHhC-CCCceEEEECCC
Confidence            78899999999999999999999999988777664322 221 25776653 3222322211 137999999998

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.70  E-value=0.00014  Score=49.69  Aligned_cols=68  Identities=15%  Similarity=0.145  Sum_probs=53.6

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |.|.+|..+++.|.++|++|++++++++..+++.+.....++..|.++.+.++.+      .....|.+|.+.+
T Consensus         7 G~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a------~i~~ad~vi~~~~   74 (218)
T 3l4b_C            7 GGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDA------EVSKNDVVVILTP   74 (218)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHH------TCCTTCEEEECCS
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhc------CcccCCEEEEecC
Confidence            3588999999999999999999999999888765545677888999987765533      1246688887765

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.69  E-value=9.9e-05  Score=54.57  Aligned_cols=65  Identities=12%  Similarity=0.209  Sum_probs=52.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+ |.+|+.+++.|++ .+.|.+++++.+.++++.+  ....+.+|++|.+++.++++       +.|+||++++.
T Consensus        23 Ga-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~--~~~~~~~d~~d~~~l~~~~~-------~~DvVi~~~p~   87 (365)
T 3abi_A           23 GA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE--FATPLKVDASNFDKLVEVMK-------EFELVIGALPG   87 (365)
T ss_dssp             CC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT--TSEEEECCTTCHHHHHHHHT-------TCSEEEECCCG
T ss_pred             CC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc--cCCcEEEecCCHHHHHHHHh-------CCCEEEEecCC
Confidence            55 9999999999875 4799999999998887754  45667899999887776654       45999999875

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.66  E-value=0.00018  Score=52.20  Aligned_cols=68  Identities=16%  Similarity=0.222  Sum_probs=48.4

Q ss_pred             CCchHHHHHHHHHHCCC-eEEEEecC---hhhHHhhhcC----CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            3 QGGIGHALARAFAASDC-RVVATGRS---KATMADLEQD----PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~-~vi~~~r~---~~~~~~~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      +||+|++++..|++.|+ +|++++|+   .++.+++.++    ....+...++.+.+++...+       ...|+||++.
T Consensus       162 aGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l-------~~aDiIINaT  234 (315)
T 3tnl_A          162 AGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEI-------AESVIFTNAT  234 (315)
T ss_dssp             CSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHH-------HTCSEEEECS
T ss_pred             CChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhh-------cCCCEEEECc
Confidence            47999999999999999 89999999   7766655432    22334445666655443322       2679999998


Q ss_pred             CCC
Q 042185           75 GVQ   77 (162)
Q Consensus        75 g~~   77 (162)
                      ...
T Consensus       235 p~G  237 (315)
T 3tnl_A          235 GVG  237 (315)
T ss_dssp             STT
T ss_pred             cCC
Confidence            754

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.66  E-value=0.00022  Score=53.00  Aligned_cols=67  Identities=13%  Similarity=0.125  Sum_probs=47.0

Q ss_pred             CCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            3 QGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      .|+||..+++.+...|++|++.+++.++++.+.+...... .++..+.+++...+.       ..|++|++++..
T Consensus       176 ~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~-~~~~~~~~~l~~~l~-------~aDvVi~~~~~p  242 (377)
T 2vhw_A          176 AGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRI-HTRYSSAYELEGAVK-------RADLVIGAVLVP  242 (377)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSS-EEEECCHHHHHHHHH-------HCSEEEECCCCT
T ss_pred             CCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCee-EeccCCHHHHHHHHc-------CCCEEEECCCcC
Confidence            4999999999999999999999999988766644211111 234444555544432       569999998753

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.65  E-value=0.0017  Score=47.24  Aligned_cols=107  Identities=19%  Similarity=0.193  Sum_probs=61.8

Q ss_pred             CCCCchHHHHHHHHHHCC--CeEEEEecChhhH--HhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASD--CRVVATGRSKATM--ADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g--~~vi~~~r~~~~~--~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|.+|..++..|+.+|  .+|+++|++++..  .++........+.. +++.++++..       +...|+||+++|.
T Consensus        15 GAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~-~~~t~d~~~a-------l~gaDvVi~~ag~   86 (326)
T 1smk_A           15 GAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRG-FLGQQQLEAA-------LTGMDLIIVPAGV   86 (326)
T ss_dssp             TTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEE-EESHHHHHHH-------HTTCSEEEECCCC
T ss_pred             CCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEE-EeCCCCHHHH-------cCCCCEEEEcCCc
Confidence            679999999999999998  6899999876521  11222111001111 2223333332       3467999999996


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEec
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG  124 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~is  124 (162)
                      ... +  ..+.+   ..+..|+.....+.+.+.+.   ..++.++++|
T Consensus        87 ~~~-~--g~~r~---dl~~~N~~~~~~i~~~i~~~---~p~~~viv~S  125 (326)
T 1smk_A           87 PRK-P--GMTRD---DLFKINAGIVKTLCEGIAKC---CPRAIVNLIS  125 (326)
T ss_dssp             CCC-S--SCCCS---HHHHHHHHHHHHHHHHHHHH---CTTSEEEECC
T ss_pred             CCC-C--CCCHH---HHHHHHHHHHHHHHHHHHhh---CCCeEEEEEC
Confidence            432 1  12222   34677888777777766442   2334555544

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.65  E-value=0.00017  Score=46.60  Aligned_cols=68  Identities=9%  Similarity=0.028  Sum_probs=50.9

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecCh-hhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSK-ATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~-~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |.|.+|..+++.|.+.|++|++++++. +..+.+..  ...+.++..|.++++.++..      .....|.+|.+.+
T Consensus        10 G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a------~i~~ad~vi~~~~   80 (153)
T 1id1_A           10 GHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKA------GIDRCRAILALSD   80 (153)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHH------TTTTCSEEEECSS
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHc------ChhhCCEEEEecC
Confidence            358999999999999999999999984 54444332  23577889999998765443      1246799998886

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.61  E-value=0.00026  Score=52.28  Aligned_cols=68  Identities=18%  Similarity=0.122  Sum_probs=46.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      |+ |++|+.++..+...|++|++++|+.++++.+.+..... +.++..+.+++...   +    ...|++|++++..
T Consensus       174 Ga-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~---~----~~~DvVI~~~~~~  241 (361)
T 1pjc_A          174 GG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSR-VELLYSNSAEIETA---V----AEADLLIGAVLVP  241 (361)
T ss_dssp             CC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGG-SEEEECCHHHHHHH---H----HTCSEEEECCCCT
T ss_pred             CC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCce-eEeeeCCHHHHHHH---H----cCCCEEEECCCcC
Confidence            44 99999999999999999999999998877664321111 11122233333322   2    2689999999863

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.61  E-value=0.00012  Score=54.05  Aligned_cols=66  Identities=21%  Similarity=0.288  Sum_probs=46.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh---hhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK---ATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~---~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+ |++|..++..+...|++|++++++.   ++++.+.+ .....+  | .+  ++.+.+.+ . . +.+|++|.++|.
T Consensus       188 Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~-~ga~~v--~-~~--~~~~~~~~-~-~-~~~d~vid~~g~  256 (366)
T 2cdc_A          188 GT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEE-TKTNYY--N-SS--NGYDKLKD-S-V-GKFDVIIDATGA  256 (366)
T ss_dssp             SC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHH-HTCEEE--E-CT--TCSHHHHH-H-H-CCEEEEEECCCC
T ss_pred             CC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHH-hCCcee--c-hH--HHHHHHHH-h-C-CCCCEEEECCCC
Confidence            66 9999999999988999999999987   76655443 223333  5 44  22222222 2 2 689999999985

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.53  E-value=0.00022  Score=51.96  Aligned_cols=72  Identities=14%  Similarity=0.260  Sum_probs=50.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|++|...+..+...|++|+.++++.++++.+.+-..-..  +|..+.+..+.+.+.. . ...+|++|+|+|.
T Consensus       156 Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~--~~~~~~~~~~~~~~~~-~-~~g~D~vid~~g~  227 (334)
T 3qwb_A          156 AAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYL--INASKEDILRQVLKFT-N-GKGVDASFDSVGK  227 (334)
T ss_dssp             STTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEE--EETTTSCHHHHHHHHT-T-TSCEEEEEECCGG
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEE--EeCCCchHHHHHHHHh-C-CCCceEEEECCCh
Confidence            679999999999999999999999999888776655332222  3555543333332221 1 1369999999984

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.53  E-value=0.00031  Score=51.88  Aligned_cols=66  Identities=17%  Similarity=0.205  Sum_probs=47.3

Q ss_pred             CCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            3 QGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      +|++|...+..+...|++|++++++.++++.+..+..... .+|..+.+.++       +..+.+|++|.++|.
T Consensus       196 aG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~-v~~~~~~~~~~-------~~~~~~D~vid~~g~  261 (366)
T 1yqd_A          196 LGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADS-FLVSRDQEQMQ-------AAAGTLDGIIDTVSA  261 (366)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSE-EEETTCHHHHH-------HTTTCEEEEEECCSS
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCce-EEeccCHHHHH-------HhhCCCCEEEECCCc
Confidence            4899999999998999999999999888776653322222 24665543322       223579999999985

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.48  E-value=0.00017  Score=52.35  Aligned_cols=72  Identities=19%  Similarity=0.206  Sum_probs=50.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|++|...+..+...|++|+++++++++++.+.+-..-.  .+|.++.+..+.+.+..  ....+|++|.|+|.
T Consensus       148 Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~--~~~~~~~~~~~~~~~~~--~~~g~Dvvid~~g~  219 (325)
T 3jyn_A          148 AAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWE--TIDYSHEDVAKRVLELT--DGKKCPVVYDGVGQ  219 (325)
T ss_dssp             STTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSE--EEETTTSCHHHHHHHHT--TTCCEEEEEESSCG
T ss_pred             cCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCE--EEeCCCccHHHHHHHHh--CCCCceEEEECCCh
Confidence            67999999999999999999999999988877665422222  24555544333332222  11369999999984

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.48  E-value=0.00052  Score=50.30  Aligned_cols=72  Identities=13%  Similarity=0.134  Sum_probs=49.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|++|...+..+...|++|+.++++.++++.+.+-..-.+  +|..+.+ +...+.+.... ..+|++|.++|.
T Consensus       172 gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~--~~~~~~~-~~~~v~~~~~~-~g~D~vid~~g~  243 (349)
T 3pi7_A          172 AGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHV--LNEKAPD-FEATLREVMKA-EQPRIFLDAVTG  243 (349)
T ss_dssp             STTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEE--EETTSTT-HHHHHHHHHHH-HCCCEEEESSCH
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEE--EECCcHH-HHHHHHHHhcC-CCCcEEEECCCC
Confidence            689999999999888899999999999888776654222222  3554443 33333332211 279999999984

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.44  E-value=0.00063  Score=49.73  Aligned_cols=71  Identities=17%  Similarity=0.166  Sum_probs=47.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|+||...+..+...|++|+.++++.++++.+.+-..-.++  |..  +++...+.+... ...+|++|.++|.
T Consensus       167 Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~--~~~--~~~~~~v~~~~~-~~g~Dvvid~~g~  237 (342)
T 4eye_A          167 GAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVL--PLE--EGWAKAVREATG-GAGVDMVVDPIGG  237 (342)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEE--ESS--TTHHHHHHHHTT-TSCEEEEEESCC-
T ss_pred             CCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEe--cCc--hhHHHHHHHHhC-CCCceEEEECCch
Confidence            7889999999999999999999999998877766543222222  333  233333322211 1269999999984

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.43  E-value=0.0002  Score=52.37  Aligned_cols=72  Identities=18%  Similarity=0.225  Sum_probs=48.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |++|++|...+..+...|++|++++++.++++.+.+-..-..  +|..+.+..+.+.+.. . ...+|++|.|+|.
T Consensus       152 Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~--~~~~~~~~~~~~~~~~-~-~~g~Dvvid~~g~  223 (340)
T 3gms_A          152 ACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYV--IDTSTAPLYETVMELT-N-GIGADAAIDSIGG  223 (340)
T ss_dssp             STTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEE--EETTTSCHHHHHHHHT-T-TSCEEEEEESSCH
T ss_pred             CCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEE--EeCCcccHHHHHHHHh-C-CCCCcEEEECCCC
Confidence            678899999999888899999999999887776654222222  3555543333332221 1 1269999999984

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.42  E-value=0.00077  Score=49.19  Aligned_cols=69  Identities=19%  Similarity=0.192  Sum_probs=49.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+ |++|..++..+...|++|+.+++++++++.+.+-. ... .+|.++.+ +...+.+..   +.+|++|.++|.
T Consensus       172 Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lG-a~~-~~d~~~~~-~~~~~~~~~---~~~d~vid~~g~  240 (339)
T 1rjw_A          172 GI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELG-ADL-VVNPLKED-AAKFMKEKV---GGVHAAVVTAVS  240 (339)
T ss_dssp             CC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-CSE-EECTTTSC-HHHHHHHHH---SSEEEEEESSCC
T ss_pred             CC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCC-CCE-EecCCCcc-HHHHHHHHh---CCCCEEEECCCC
Confidence            56 78999999999999999999999988877665422 222 25766543 333333332   689999999984

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.41  E-value=0.00032  Score=46.54  Aligned_cols=68  Identities=10%  Similarity=0.058  Sum_probs=52.0

Q ss_pred             CCCchHHHHHHHHHHC-CCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAAS-DCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |.|.+|..+++.|.+. |++|+++++++++.+.+.+. ...++.+|.++.+.++.+     ......|.+|.+.+
T Consensus        46 G~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~-g~~~~~gd~~~~~~l~~~-----~~~~~ad~vi~~~~  114 (183)
T 3c85_A           46 GMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSE-GRNVISGDATDPDFWERI-----LDTGHVKLVLLAMP  114 (183)
T ss_dssp             CCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT-TCCEEECCTTCHHHHHTB-----CSCCCCCEEEECCS
T ss_pred             CCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC-CCCEEEcCCCCHHHHHhc-----cCCCCCCEEEEeCC
Confidence            4689999999999999 99999999999888776543 456677899887644321     01346899998876

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.40  E-value=0.00081  Score=51.14  Aligned_cols=76  Identities=13%  Similarity=0.117  Sum_probs=53.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEe---c--------cCChHHHHHHHHHHHHHcC--Cc
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQEL---D--------VLSEQSVQNVLSNVLEKFG--KI   67 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~---D--------~~~~~~i~~~~~~~~~~~~--~i   67 (162)
                      |++|++|...+..+...|++|+++++++++++.+.+-..-.++..   |        .++.++++.+.+.+.+..+  .+
T Consensus       236 GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~  315 (456)
T 3krt_A          236 GASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDI  315 (456)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCE
T ss_pred             CCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCC
Confidence            678999999999988999999999998888776654222222211   1        2345566666677766543  79


Q ss_pred             cEEEECCCC
Q 042185           68 DVLVNNAGV   76 (162)
Q Consensus        68 d~vi~~ag~   76 (162)
                      |++|.++|.
T Consensus       316 Dvvid~~G~  324 (456)
T 3krt_A          316 DIVFEHPGR  324 (456)
T ss_dssp             EEEEECSCH
T ss_pred             cEEEEcCCc
Confidence            999999983

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.39  E-value=0.00025  Score=50.32  Aligned_cols=64  Identities=14%  Similarity=0.234  Sum_probs=43.8

Q ss_pred             CCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCce--eEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            3 QGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRF--FVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~--~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      +||+|++++..|++.|++|++++|+.++.+++.++...  .....|+   +++.       +  +..|++|++++...
T Consensus       127 aGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~---~~~~-------~--~~~DivIn~t~~~~  192 (272)
T 1p77_A          127 AGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSM---DSIP-------L--QTYDLVINATSAGL  192 (272)
T ss_dssp             CSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEG---GGCC-------C--SCCSEEEECCCC--
T ss_pred             CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeH---HHhc-------c--CCCCEEEECCCCCC
Confidence            48999999999999999999999998877766432110  1112333   1111       1  48899999999754

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.38  E-value=0.00053  Score=50.54  Aligned_cols=70  Identities=23%  Similarity=0.258  Sum_probs=49.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|++|..++..+...|++|+.+++++++++.+.+-..-..  +|..+. ++...+.+..  .+.+|++|.++|
T Consensus       171 Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~--~~~~~~-~~~~~~~~~~--~~g~D~vid~~g  240 (362)
T 2c0c_A          171 AAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRP--INYKTE-PVGTVLKQEY--PEGVDVVYESVG  240 (362)
T ss_dssp             TTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEE--EETTTS-CHHHHHHHHC--TTCEEEEEECSC
T ss_pred             CCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEE--EecCCh-hHHHHHHHhc--CCCCCEEEECCC
Confidence            679999999999999999999999999887776654322222  354443 3333333321  236999999998

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.35  E-value=0.0011  Score=48.45  Aligned_cols=69  Identities=20%  Similarity=0.175  Sum_probs=48.6

Q ss_pred             CCCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+ |++|...+..+...|+ +|+.+++++++++.+.+-  ... .+|..+. ++.+.+.++.  ...+|++|.++|.
T Consensus       172 Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l--a~~-v~~~~~~-~~~~~~~~~~--~~g~D~vid~~g~  241 (343)
T 2dq4_A          172 GA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY--ADR-LVNPLEE-DLLEVVRRVT--GSGVEVLLEFSGN  241 (343)
T ss_dssp             CC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT--CSE-EECTTTS-CHHHHHHHHH--SSCEEEEEECSCC
T ss_pred             CC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh--HHh-ccCcCcc-CHHHHHHHhc--CCCCCEEEECCCC
Confidence            66 8999999998888999 999999998887766443  222 2455443 3444444432  3479999999984

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.31  E-value=0.00085  Score=48.50  Aligned_cols=78  Identities=18%  Similarity=0.166  Sum_probs=51.9

Q ss_pred             CCchHHHHHHHHHHCCCeEEEEecChhhHHh---h------h-------cCCceeEEEeccCChHHHHHHHHHH------
Q 042185            3 QGGIGHALARAFAASDCRVVATGRSKATMAD---L------E-------QDPRFFVQELDVLSEQSVQNVLSNV------   60 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~---~------~-------~~~~~~~~~~D~~~~~~i~~~~~~~------   60 (162)
                      ||-+|.++|+.++++|+.|+++.+......-   .      .       .......+.+|+...+++...+.+.      
T Consensus        64 SGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~  143 (313)
T 1p9o_A           64 SGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPALSGLLSLEAEENALPGFAEALRSYQEAAAA  143 (313)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-CCSEEEEEEETTTSTTHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccccccccceeeeccccHHHHHHHHHHHhhhhcc
Confidence            4559999999999999999999885321100   0      0       0122346677777766666665443      


Q ss_pred             ------------------------HHHcCCccEEEECCCCCCCC
Q 042185           61 ------------------------LEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus        61 ------------------------~~~~~~id~vi~~ag~~~~~   80 (162)
                                              .+.+++.|++|.+|++....
T Consensus       144 ~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsDf~  187 (313)
T 1p9o_A          144 GTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDFY  187 (313)
T ss_dssp             TCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCSEE
T ss_pred             ccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhhcc
Confidence                                    23457899999999986443

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.27  E-value=0.00066  Score=49.68  Aligned_cols=70  Identities=19%  Similarity=0.185  Sum_probs=48.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|++|...+..+...|++|+.++++.++++.+.+-..-.+  +|..+  ++...+.+.  ..+.+|++|.++|.
T Consensus       158 gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v--i~~~~--~~~~~~~~~--~~~g~Dvv~d~~g~  227 (346)
T 3fbg_A          158 NGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIV--LNHKE--SLLNQFKTQ--GIELVDYVFCTFNT  227 (346)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEE--ECTTS--CHHHHHHHH--TCCCEEEEEESSCH
T ss_pred             cCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEE--EECCc--cHHHHHHHh--CCCCccEEEECCCc
Confidence            789999999999999999999999999888776655222222  23332  233333333  23479999999884

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.25  E-value=0.00081  Score=48.23  Aligned_cols=66  Identities=15%  Similarity=0.081  Sum_probs=46.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |++|++|..++..+...|++|+.+++++++++.+.+-..-..  +|..+.+++   .+.+    +.+|++|. +|.
T Consensus       133 Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~--~~~~~~~~~---~~~~----~~~d~vid-~g~  198 (302)
T 1iz0_A          133 AAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEA--ATYAEVPER---AKAW----GGLDLVLE-VRG  198 (302)
T ss_dssp             STTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEE--EEGGGHHHH---HHHT----TSEEEEEE-CSC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEE--EECCcchhH---HHHh----cCceEEEE-CCH
Confidence            778999999999999999999999999887776654222222  355441122   2222    57999999 874

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.24  E-value=0.011  Score=43.82  Aligned_cols=74  Identities=12%  Similarity=0.067  Sum_probs=49.5

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccC-----------ChHHHHHHHHHHHHHcCCccEE
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVL-----------SEQSVQNVLSNVLEKFGKIDVL   70 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~-----------~~~~i~~~~~~~~~~~~~id~v   70 (162)
                      |.|.+|..+++.+...|++|++.+++.++++.+.+- ...+...|+.           ..+....-...+.+....-|+|
T Consensus       191 G~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~l-Ga~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~l~~aDIV  269 (381)
T 3p2y_A          191 GVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSV-GAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDAITKFDIV  269 (381)
T ss_dssp             SCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHT-TCEECCCC-------------CHHHHHHHHHHHHHHHTTCSEE
T ss_pred             CchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCeEEeccccccccccchhhhhHHHHhhhHHHHHHHHhcCCEE
Confidence            458999999999999999999999999887776542 2333332210           0111223344455555788999


Q ss_pred             EECCCC
Q 042185           71 VNNAGV   76 (162)
Q Consensus        71 i~~ag~   76 (162)
                      |.++..
T Consensus       270 I~tv~i  275 (381)
T 3p2y_A          270 ITTALV  275 (381)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            998754

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.24  E-value=0.0016  Score=47.12  Aligned_cols=69  Identities=17%  Similarity=0.247  Sum_probs=46.5

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecC---hhhHHhhhcC----CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRS---KATMADLEQD----PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~---~~~~~~~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      |+||.|++++..|++.|+ +|.++.|+   .++.+++.++    ........+..+.+.+...+       ...|+|||+
T Consensus       155 GAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l-------~~~DiIINa  227 (312)
T 3t4e_A          155 GAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEAL-------ASADILTNG  227 (312)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHH-------HHCSEEEEC
T ss_pred             CcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhc-------cCceEEEEC
Confidence            458999999999999999 89999999   6666655432    22333344555532222222       246999999


Q ss_pred             CCCC
Q 042185           74 AGVQ   77 (162)
Q Consensus        74 ag~~   77 (162)
                      .+..
T Consensus       228 Tp~G  231 (312)
T 3t4e_A          228 TKVG  231 (312)
T ss_dssp             SSTT
T ss_pred             CcCC
Confidence            8764

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.22  E-value=0.00018  Score=51.48  Aligned_cols=66  Identities=21%  Similarity=0.336  Sum_probs=45.2

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCC-----ceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDP-----RFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |+||+|++++..|++.|+ +|++++|+.++.+++.++.     ...+...+.   +++...+.       ..|+||++..
T Consensus       134 GaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~---~~l~~~l~-------~~DiVInaTp  203 (283)
T 3jyo_A          134 GAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA---RGIEDVIA-------AADGVVNATP  203 (283)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS---TTHHHHHH-------HSSEEEECSS
T ss_pred             CCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH---HHHHHHHh-------cCCEEEECCC
Confidence            358999999999999999 7999999988877664321     122333333   23333322       4599999987


Q ss_pred             CC
Q 042185           76 VQ   77 (162)
Q Consensus        76 ~~   77 (162)
                      ..
T Consensus       204 ~G  205 (283)
T 3jyo_A          204 MG  205 (283)
T ss_dssp             TT
T ss_pred             CC
Confidence            54

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=97.17  E-value=0.0016  Score=45.73  Aligned_cols=62  Identities=18%  Similarity=0.258  Sum_probs=45.1

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      |+||.|++++..|.+.|+ +|.+++|+.++.+++.++...    .+   .+++...+       ...|+||++....
T Consensus       115 GaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~----~~---~~~~~~~~-------~~aDiVInatp~g  177 (253)
T 3u62_A          115 GAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKI----FS---LDQLDEVV-------KKAKSLFNTTSVG  177 (253)
T ss_dssp             CCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEE----EE---GGGHHHHH-------HTCSEEEECSSTT
T ss_pred             CcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHccc----CC---HHHHHhhh-------cCCCEEEECCCCC
Confidence            468999999999999998 899999999988877654332    11   22332221       2579999988643

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.17  E-value=0.0033  Score=45.98  Aligned_cols=71  Identities=17%  Similarity=0.190  Sum_probs=46.8

Q ss_pred             CCCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+ |++|...+..+...|+ +|+.+++++++++.+.+-..-..  +|..+.+ +...+.+... ...+|++|.++|.
T Consensus       175 Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~--~~~~~~~-~~~~v~~~~~-g~g~D~vid~~g~  246 (348)
T 2d8a_A          175 GA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYV--INPFEED-VVKEVMDITD-GNGVDVFLEFSGA  246 (348)
T ss_dssp             CC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEE--ECTTTSC-HHHHHHHHTT-TSCEEEEEECSCC
T ss_pred             CC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEE--ECCCCcC-HHHHHHHHcC-CCCCCEEEECCCC
Confidence            66 8999999999989999 99999999887766643222112  3554432 2222222211 1269999999984

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.17  E-value=0.00077  Score=48.47  Aligned_cols=68  Identities=13%  Similarity=0.203  Sum_probs=46.3

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      |.||+|++++..|++.|+ +|++++|+.++.+++.++......  ++.+.+       ++.+.....|+||++++...
T Consensus       148 GaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~--~~~~~~-------~~~~~~~~aDivIn~t~~~~  216 (297)
T 2egg_A          148 GAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS--AYFSLA-------EAETRLAEYDIIINTTSVGM  216 (297)
T ss_dssp             CCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC--CEECHH-------HHHHTGGGCSEEEECSCTTC
T ss_pred             CcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC--ceeeHH-------HHHhhhccCCEEEECCCCCC
Confidence            358999999999999998 999999999887766543211000  111222       22333457899999998653

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.13  E-value=0.0084  Score=44.04  Aligned_cols=74  Identities=16%  Similarity=0.156  Sum_probs=49.0

Q ss_pred             CCCCchHHHHHHHHHHCCCe-EEEEecChhhHHhhhcC-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCR-VVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~-vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+ |++|...+......|++ |+.+++++++++.+.+- ..+..+..|-.+.+++...+.+... ...+|++|.++|.
T Consensus       187 Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~-g~g~Dvvid~~g~  262 (363)
T 3m6i_A          187 GA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFG-GIEPAVALECTGV  262 (363)
T ss_dssp             CC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTS-SCCCSEEEECSCC
T ss_pred             CC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhC-CCCCCEEEECCCC
Confidence            55 89999999888889996 99999998877765442 1233334444444444443333311 1369999999984

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.13  E-value=0.0047  Score=45.61  Aligned_cols=70  Identities=16%  Similarity=0.228  Sum_probs=48.2

Q ss_pred             CCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCC-hHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            3 QGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLS-EQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      +|++|...+..+...|+ +|+.+++++++++.+.+-..-.+  +|.++ .+++...+.++..  +.+|++|.++|.
T Consensus       201 aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v--i~~~~~~~~~~~~~~~~~~--~g~D~vid~~g~  272 (374)
T 1cdo_A          201 LGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDF--VNPNDHSEPISQVLSKMTN--GGVDFSLECVGN  272 (374)
T ss_dssp             CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEE--ECGGGCSSCHHHHHHHHHT--SCBSEEEECSCC
T ss_pred             CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceE--EeccccchhHHHHHHHHhC--CCCCEEEECCCC
Confidence            58999999988888999 89999999888776654322222  35443 1234444444432  479999999985

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.12  E-value=0.011  Score=43.21  Aligned_cols=73  Identities=19%  Similarity=0.116  Sum_probs=47.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCC-hHHHHHHHHHHHH-HcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLS-EQSVQNVLSNVLE-KFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~-~~~~id~vi~~ag~   76 (162)
                      |+ |++|...+..+...|++|+++++++++++.+.+-..-..  +|.++ .+..+.+.+...+ ....+|++|.++|.
T Consensus       176 Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~--~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~~g~  250 (352)
T 1e3j_A          176 GA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVT--LVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGN  250 (352)
T ss_dssp             CC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEE--EECCTTTSCHHHHHHHHHHHSSSCCSEEEECSCC
T ss_pred             CC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEE--EcCcccccHHHHHHHHhccccCCCCCEEEECCCC
Confidence            54 899999998888899999999999888776654322222  35443 3223333222210 02369999999984

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.07  E-value=0.00038  Score=48.11  Aligned_cols=65  Identities=8%  Similarity=-0.010  Sum_probs=49.0

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |.|.+|..+++.|.++|+ |++++++++..+.+.  ..+.++.+|.++.+.++.+      .....|.+|.+.+
T Consensus        16 G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~--~~~~~i~gd~~~~~~l~~a------~i~~ad~vi~~~~   80 (234)
T 2aef_A           16 GWSESTLECLRELRGSEV-FVLAEDENVRKKVLR--SGANFVHGDPTRVSDLEKA------NVRGARAVIVDLE   80 (234)
T ss_dssp             SCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH--TTCEEEESCTTCHHHHHHT------TCTTCSEEEECCS
T ss_pred             CCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh--cCCeEEEcCCCCHHHHHhc------CcchhcEEEEcCC
Confidence            357999999999999999 999999998877766  4477888999887655433      1234566766654

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.06  E-value=0.0044  Score=46.43  Aligned_cols=35  Identities=17%  Similarity=0.076  Sum_probs=30.3

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ   36 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~   36 (162)
                      |.|.+|..+++.+...|++|++++++.++++.+.+
T Consensus       179 GaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~  213 (401)
T 1x13_A          179 GAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS  213 (401)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHH
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            46899999999999999999999999887766643

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.04  E-value=0.00017  Score=49.03  Aligned_cols=34  Identities=21%  Similarity=0.298  Sum_probs=29.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhh
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADL   34 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~   34 (162)
                      ||+|.+|.++++.|+++|++|++.+|++++.+++
T Consensus         7 Ga~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~   40 (212)
T 1jay_A            7 GGTGNLGKGLALRLATLGHEIVVGSRREEKAEAK   40 (212)
T ss_dssp             TTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            5689999999999999999999999998766544

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.00  E-value=0.00014  Score=46.48  Aligned_cols=64  Identities=13%  Similarity=0.272  Sum_probs=44.7

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      |+|++|..+++.|.+.|++|++.+|+.++.+++..+......  +..+   +...+       ...|++|.+.+..
T Consensus        28 G~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~--~~~~---~~~~~-------~~~Divi~at~~~   91 (144)
T 3oj0_A           28 GNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYV--LIND---IDSLI-------KNNDVIITATSSK   91 (144)
T ss_dssp             CCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEE--ECSC---HHHHH-------HTCSEEEECSCCS
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceE--eecC---HHHHh-------cCCCEEEEeCCCC
Confidence            469999999999999999999999999887765543332221  2222   22222       2579999998753

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.98  E-value=0.00075  Score=51.51  Aligned_cols=68  Identities=13%  Similarity=0.197  Sum_probs=54.9

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |.|-+|..+|+.|.++|+.|++++++++.++++.++..+.++.+|.++++-++++-      ..+-|.+|.+.+
T Consensus        10 G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Ag------i~~ad~~ia~t~   77 (461)
T 4g65_A           10 GAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAG------AQDADMLVAVTN   77 (461)
T ss_dssp             CCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHT------TTTCSEEEECCS
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcC------CCcCCEEEEEcC
Confidence            57899999999999999999999999999988877667888889999887665541      124577776654

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=96.97  E-value=0.025  Score=40.84  Aligned_cols=140  Identities=14%  Similarity=0.084  Sum_probs=75.5

Q ss_pred             CCCCchHHHHHHHHHHCCC--eEEEEec--ChhhHHh----hhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            1 CSQGGIGHALARAFAASDC--RVVATGR--SKATMAD----LEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~--~vi~~~r--~~~~~~~----~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      ||+|.+|.+++..|+.+|.  ++.++|+  +.++++.    +.......-..+++++.++      .+.+.+...|+||+
T Consensus         7 GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d------~l~~al~gaD~Vi~   80 (313)
T 1hye_A            7 GASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESD------ENLRIIDESDVVII   80 (313)
T ss_dssp             TTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEET------TCGGGGTTCSEEEE
T ss_pred             CCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCc------chHHHhCCCCEEEE
Confidence            7889999999999998874  6888998  6543321    1110000001122221110      01122346799999


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccccc--------CCCCCchhhhH-hHH
Q 042185           73 NAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVA--------APGPWAGTYTA-SKA  143 (162)
Q Consensus        73 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~--------~~~~~~~~y~~-sKa  143 (162)
                      +||.... +  ..+.   ...+..|+.....+++.+..    ..++.++++|.....        .+.|....++. +..
T Consensus        81 ~Ag~~~~-~--g~~r---~dl~~~N~~i~~~i~~~i~~----~~~~~vlv~SNPv~~~t~~~~k~~~~p~~rviG~gt~L  150 (313)
T 1hye_A           81 TSGVPRK-E--GMSR---MDLAKTNAKIVGKYAKKIAE----ICDTKIFVITNPVDVMTYKALVDSKFERNQVFGLGTHL  150 (313)
T ss_dssp             CCSCCCC-T--TCCH---HHHHHHHHHHHHHHHHHHHH----HCCCEEEECSSSHHHHHHHHHHHHCCCTTSEEECTTHH
T ss_pred             CCCCCCC-C--CCcH---HHHHHHHHHHHHHHHHHHHH----hCCeEEEEecCcHHHHHHHHHHhhCcChhcEEEeCccH
Confidence            9996422 1  2232   34578888888777777644    224455555543221        12444445565 443


Q ss_pred             HHHHHHHHHHHHh
Q 042185          144 ALHSLTDTLRLEL  156 (162)
Q Consensus       144 a~~~l~~~l~~e~  156 (162)
                      -...+...+++.+
T Consensus       151 D~~r~~~~la~~l  163 (313)
T 1hye_A          151 DSLRFKVAIAKFF  163 (313)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            3444455555544

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.97  E-value=0.0014  Score=47.48  Aligned_cols=70  Identities=17%  Similarity=0.088  Sum_probs=45.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |++|++|...+..+...|++|+.+++++++++.+.+-..-..  +|..+.+  ...+.++  ..+.+|++|.++|.
T Consensus       157 Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~--i~~~~~~--~~~~~~~--~~~~~d~vid~~g~  226 (328)
T 1xa0_A          157 GATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEV--LAREDVM--AERIRPL--DKQRWAAAVDPVGG  226 (328)
T ss_dssp             STTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEE--EECC-----------C--CSCCEEEEEECSTT
T ss_pred             cCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEE--EecCCcH--HHHHHHh--cCCcccEEEECCcH
Confidence            678999999999888899999999998877776654322222  3544432  2222222  12469999999984

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=96.95  E-value=0.0019  Score=47.27  Aligned_cols=69  Identities=19%  Similarity=0.201  Sum_probs=46.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|++|...+..+...|++|+.+ ++.++++.+.+-. ...  +| .+. ++...+.+... ...+|++|.++|.
T Consensus       158 Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lG-a~~--i~-~~~-~~~~~~~~~~~-~~g~D~vid~~g~  226 (343)
T 3gaz_A          158 GGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLG-ATP--ID-ASR-EPEDYAAEHTA-GQGFDLVYDTLGG  226 (343)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHT-SEE--EE-TTS-CHHHHHHHHHT-TSCEEEEEESSCT
T ss_pred             cCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcC-CCE--ec-cCC-CHHHHHHHHhc-CCCceEEEECCCc
Confidence            679999999999999999999999 7777766654422 233  45 333 33333333321 1369999999983

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.95  E-value=0.0045  Score=43.82  Aligned_cols=60  Identities=17%  Similarity=0.147  Sum_probs=44.1

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      |+||.|++++..|.+.|.+|.++.|+.++.+++. +..+...  +..+   +           ...|+||++.....
T Consensus       125 GaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~~~~--~~~~---l-----------~~~DiVInaTp~Gm  184 (269)
T 3phh_A          125 GAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGCDCF--MEPP---K-----------SAFDLIINATSASL  184 (269)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTCEEE--SSCC---S-----------SCCSEEEECCTTCC
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeEe--cHHH---h-----------ccCCEEEEcccCCC
Confidence            4689999999999999999999999998877765 3222222  2222   1           16799999987643

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.92  E-value=0.011  Score=43.56  Aligned_cols=70  Identities=17%  Similarity=0.254  Sum_probs=47.6

Q ss_pred             CCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCC-hHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            3 QGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLS-EQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      +|++|...+..+...|+ +|+.+++++++++.+.+-..-.+  +|..+ .+++...+.++..  +.+|++|.++|.
T Consensus       204 aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v--i~~~~~~~~~~~~v~~~~~--~g~Dvvid~~G~  275 (376)
T 1e3i_A          204 LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDC--LNPRELDKPVQDVITELTA--GGVDYSLDCAGT  275 (376)
T ss_dssp             CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEE--ECGGGCSSCHHHHHHHHHT--SCBSEEEESSCC
T ss_pred             CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEE--EccccccchHHHHHHHHhC--CCccEEEECCCC
Confidence            58999999988888999 89999999888776654322222  34443 1234444444322  479999999985

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=96.90  E-value=0.016  Score=41.61  Aligned_cols=101  Identities=18%  Similarity=0.133  Sum_probs=60.0

Q ss_pred             CCCCchHHHHHHHHHHCCC--eEEEEec--ChhhHHhhhc--------CCceeEEEeccCChHHHHHHHHHHHHHcCCcc
Q 042185            1 CSQGGIGHALARAFAASDC--RVVATGR--SKATMADLEQ--------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKID   68 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~--~vi~~~r--~~~~~~~~~~--------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id   68 (162)
                      ||+|.+|.+++..|+.+|.  +++++|+  +.++++....        ...+.+.. +  +           .+.+...|
T Consensus         7 GAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~-----------~~a~~~aD   72 (303)
T 1o6z_A            7 GAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G-----------YEDTAGSD   72 (303)
T ss_dssp             TTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C-----------GGGGTTCS
T ss_pred             CCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C-----------HHHhCCCC
Confidence            6899999999999998875  6899998  6654332110        01111111 1  1           12234789


Q ss_pred             EEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEec
Q 042185           69 VLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG  124 (162)
Q Consensus        69 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~is  124 (162)
                      +||+++|.... +  ..+.+   ..+..|+.....+.+.+..+   ..++.++++|
T Consensus        73 vVi~~ag~~~~-~--g~~r~---dl~~~N~~i~~~i~~~i~~~---~p~~~viv~S  119 (303)
T 1o6z_A           73 VVVITAGIPRQ-P--GQTRI---DLAGDNAPIMEDIQSSLDEH---NDDYISLTTS  119 (303)
T ss_dssp             EEEECCCCCCC-T--TCCHH---HHHHHHHHHHHHHHHHHHTT---CSCCEEEECC
T ss_pred             EEEEcCCCCCC-C--CCCHH---HHHHHHHHHHHHHHHHHHHH---CCCcEEEEeC
Confidence            99999996422 1  22333   34778888777777665442   2344555444

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.89  E-value=0.0016  Score=46.41  Aligned_cols=62  Identities=10%  Similarity=0.189  Sum_probs=43.0

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      |+||+|++++..|.+.|+ +|++++|+.++.+++..+..  ..     ..+++       .+.....|+||++....
T Consensus       124 GaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~--~~-----~~~~~-------~~~~~~aDiVInaTp~G  186 (277)
T 3don_A          124 GAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNIN--KI-----NLSHA-------ESHLDEFDIIINTTPAG  186 (277)
T ss_dssp             CCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCE--EE-----CHHHH-------HHTGGGCSEEEECCC--
T ss_pred             CCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcc--cc-----cHhhH-------HHHhcCCCEEEECccCC
Confidence            458999999999999999 89999999988776654321  11     22222       22234679999998653

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.85  E-value=0.0088  Score=44.77  Aligned_cols=74  Identities=16%  Similarity=0.083  Sum_probs=47.3

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEec----------------cCChHHHHHHHHHHHHHcC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELD----------------VLSEQSVQNVLSNVLEKFG   65 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D----------------~~~~~~i~~~~~~~~~~~~   65 (162)
                      |.|.+|..+++.+...|++|++.|++..+++.+.+- ...+...+                +++. .+..-...+.+...
T Consensus       197 G~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~-G~~~~~~~~~~~~d~~~~~~ya~e~s~~-~~~~~~~~l~e~l~  274 (405)
T 4dio_A          197 GAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASL-GAKFIAVEDEEFKAAETAGGYAKEMSGE-YQVKQAALVAEHIA  274 (405)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHT-TCEECCCCC-----------------CH-HHHHHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc-CCceeecccccccccccccchhhhcchh-hhhhhHhHHHHHhc
Confidence            458999999999999999999999999887776542 23333322                2221 11111222333334


Q ss_pred             CccEEEECCCCC
Q 042185           66 KIDVLVNNAGVQ   77 (162)
Q Consensus        66 ~id~vi~~ag~~   77 (162)
                      .-|+||.++...
T Consensus       275 ~aDVVI~tvlip  286 (405)
T 4dio_A          275 KQDIVITTALIP  286 (405)
T ss_dssp             TCSEEEECCCCS
T ss_pred             CCCEEEECCcCC
Confidence            779999998654

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.84  E-value=0.0061  Score=43.62  Aligned_cols=75  Identities=15%  Similarity=0.179  Sum_probs=54.2

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC-----------CceeEEEeccCChHHHHHHHHHHHHHcCCccEE
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD-----------PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVL   70 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~-----------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~v   70 (162)
                      |.|.+|..++..|++.|++|++.+|++++.+.+.+.           ....++..=+.+...++.+++++.+...+-.++
T Consensus        22 G~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~l~~~l~~g~iv  101 (296)
T 3qha_A           22 GLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAAADLIHITVLDDAQVREVVGELAGHAKPGTVI  101 (296)
T ss_dssp             CCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTTSSEEEECCSSHHHHHHHHHHHHTTCCTTCEE
T ss_pred             CcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHhCCEEEEECCChHHHHHHHHHHHHhcCCCCEE
Confidence            578999999999999999999999998776654331           114455555566677888888877655455667


Q ss_pred             EECCCC
Q 042185           71 VNNAGV   76 (162)
Q Consensus        71 i~~ag~   76 (162)
                      |++...
T Consensus       102 v~~st~  107 (296)
T 3qha_A          102 AIHSTI  107 (296)
T ss_dssp             EECSCC
T ss_pred             EEeCCC
Confidence            766643

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.81  E-value=0.00072  Score=48.04  Aligned_cols=62  Identities=18%  Similarity=0.292  Sum_probs=43.9

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCC---ceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDP---RFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~---~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      |+||+|++++..|++.|+ +|++++|+.++.+++.++.   .+...  ++   +++.       .  ...|+||++....
T Consensus       127 GaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~--~~---~~l~-------~--~~~DivInaTp~g  192 (272)
T 3pwz_A          127 GAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRIS--RY---EALE-------G--QSFDIVVNATSAS  192 (272)
T ss_dssp             CCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEE--CS---GGGT-------T--CCCSEEEECSSGG
T ss_pred             CccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEe--eH---HHhc-------c--cCCCEEEECCCCC
Confidence            357999999999999996 9999999998877765432   12222  22   2211       1  4789999998754

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.79  E-value=0.013  Score=41.70  Aligned_cols=60  Identities=17%  Similarity=0.224  Sum_probs=44.7

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      |+||.|++++..|.+.|+ +|.++.|+.++.+++.++..  ..     ..+++       .+ . ..|+|||+....
T Consensus       129 GaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~--~~-----~~~~l-------~~-l-~~DivInaTp~G  189 (282)
T 3fbt_A          129 GSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFK--VI-----SYDEL-------SN-L-KGDVIINCTPKG  189 (282)
T ss_dssp             CSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSE--EE-----EHHHH-------TT-C-CCSEEEECSSTT
T ss_pred             CCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcC--cc-----cHHHH-------Hh-c-cCCEEEECCccC
Confidence            468999999999999998 89999999998887765442  11     12222       22 3 789999998653

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.78  E-value=0.0049  Score=45.55  Aligned_cols=69  Identities=20%  Similarity=0.220  Sum_probs=45.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      ||+|++|...+..+...|++|+.++ +.++.+.+.+-..-..  +|..+.+-.+    ++.+ .+.+|++|.++|..
T Consensus       191 Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~v--~~~~~~~~~~----~~~~-~~g~D~vid~~g~~  259 (375)
T 2vn8_A          191 GASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGADDV--IDYKSGSVEE----QLKS-LKPFDFILDNVGGS  259 (375)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEE--EETTSSCHHH----HHHT-SCCBSEEEESSCTT
T ss_pred             CCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCCCEE--EECCchHHHH----HHhh-cCCCCEEEECCCCh
Confidence            6799999999998888999999888 4455555543222222  3554433222    2222 25799999999864

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.77  E-value=0.0062  Score=43.29  Aligned_cols=75  Identities=23%  Similarity=0.248  Sum_probs=52.3

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC------------CceeEEEeccCChHHHHHHH---HHHHHHcCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------------PRFFVQELDVLSEQSVQNVL---SNVLEKFGK   66 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~------------~~~~~~~~D~~~~~~i~~~~---~~~~~~~~~   66 (162)
                      |.|.+|..++..|++.|++|++.+|++++.+.+.+.            ....++-.=+.+...++.++   +++.+...+
T Consensus         8 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~   87 (287)
T 3pef_A            8 GLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGVLEGIGE   87 (287)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCT
T ss_pred             eecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchHhhcCCC
Confidence            568999999999999999999999998877665432            11234444455566777777   666665544


Q ss_pred             ccEEEECCCC
Q 042185           67 IDVLVNNAGV   76 (162)
Q Consensus        67 id~vi~~ag~   76 (162)
                      =.++|++...
T Consensus        88 ~~~vi~~st~   97 (287)
T 3pef_A           88 GRGYVDMSTV   97 (287)
T ss_dssp             TCEEEECSCC
T ss_pred             CCEEEeCCCC
Confidence            4566666543

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.74  E-value=0.0093  Score=43.96  Aligned_cols=70  Identities=19%  Similarity=0.293  Sum_probs=46.5

Q ss_pred             CCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCC-hHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            3 QGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLS-EQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      +|++|...+..+...|+ +|+.+++++++++.+.+-..-.+  +|..+ .+++...+.++..  +.+|++|.++|.
T Consensus       199 aG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v--i~~~~~~~~~~~~v~~~~~--~g~D~vid~~g~  270 (373)
T 2fzw_A          199 LGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATEC--INPQDFSKPIQEVLIEMTD--GGVDYSFECIGN  270 (373)
T ss_dssp             CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEE--ECGGGCSSCHHHHHHHHTT--SCBSEEEECSCC
T ss_pred             CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceE--eccccccccHHHHHHHHhC--CCCCEEEECCCc
Confidence            48999999988888899 89999999887776654222222  34443 1234444443322  479999999984

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.74  E-value=0.012  Score=42.50  Aligned_cols=75  Identities=19%  Similarity=0.184  Sum_probs=52.5

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC------------CceeEEEeccCChHHHHHHHH--HHHHHcCCc
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------------PRFFVQELDVLSEQSVQNVLS--NVLEKFGKI   67 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~------------~~~~~~~~D~~~~~~i~~~~~--~~~~~~~~i   67 (162)
                      |.|.+|..++..|++.|++|++.+|++++.+++.+.            ....++-.-+.+...++.++.  ++.+...+-
T Consensus        38 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~~~~~~l~~~  117 (320)
T 4dll_A           38 GTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQGVAAAMKPG  117 (320)
T ss_dssp             CCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTTCHHHHCCTT
T ss_pred             CccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcchhHHhhCCCC
Confidence            568999999999999999999999998877765432            123344444455667777776  555555555


Q ss_pred             cEEEECCCC
Q 042185           68 DVLVNNAGV   76 (162)
Q Consensus        68 d~vi~~ag~   76 (162)
                      .++|++...
T Consensus       118 ~~vi~~st~  126 (320)
T 4dll_A          118 SLFLDMASI  126 (320)
T ss_dssp             CEEEECSCC
T ss_pred             CEEEecCCC
Confidence            666666543

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.74  E-value=0.0085  Score=44.38  Aligned_cols=69  Identities=13%  Similarity=0.094  Sum_probs=46.8

Q ss_pred             CCchHHHHHHHHHHCC-CeEEEEecChhhHHhhhcCCceeEEEeccC--ChHHHHHHHHHHHHHc-C-CccEEEECCCC
Q 042185            3 QGGIGHALARAFAASD-CRVVATGRSKATMADLEQDPRFFVQELDVL--SEQSVQNVLSNVLEKF-G-KIDVLVNNAGV   76 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g-~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~--~~~~i~~~~~~~~~~~-~-~id~vi~~ag~   76 (162)
                      +|++|...+..+...| ++|+.+++++++++.+.+-..-.++  |..  +.+++..   ++.+.. + .+|++|.++|.
T Consensus       204 aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi--~~~~~~~~~~~~---~v~~~~~g~g~Dvvid~~g~  277 (380)
T 1vj0_A          204 AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTL--NRRETSVEERRK---AIMDITHGRGADFILEATGD  277 (380)
T ss_dssp             CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEE--ETTTSCHHHHHH---HHHHHTTTSCEEEEEECSSC
T ss_pred             cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEE--eccccCcchHHH---HHHHHhCCCCCcEEEECCCC
Confidence            7899999999888899 5999999998887776543322232  433  1333333   333322 2 69999999984

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.66  E-value=0.0074  Score=44.72  Aligned_cols=71  Identities=14%  Similarity=0.175  Sum_probs=48.4

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+|++|...+..+...|++|+.+++++++++.+.+-..-.+  +|..+.+ +...+.++... ..+|++|.++|.
T Consensus       180 g~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~--~~~~~~~-~~~~v~~~t~~-~g~d~v~d~~g~  250 (379)
T 3iup_A          180 AASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHV--CNAASPT-FMQDLTEALVS-TGATIAFDATGG  250 (379)
T ss_dssp             TTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHTTCSCE--EETTSTT-HHHHHHHHHHH-HCCCEEEESCEE
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCcEE--EeCCChH-HHHHHHHHhcC-CCceEEEECCCc
Confidence            89999999998888889999999999888877765332223  3444433 22222222211 269999999985

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.64  E-value=0.013  Score=42.53  Aligned_cols=68  Identities=16%  Similarity=0.140  Sum_probs=47.8

Q ss_pred             CCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            3 QGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      +|++|...+..+...|++|+.+++++++++.+.+-..-..  +|..+.+..+.+    .+..+.+|.+|.++|.
T Consensus       175 aG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~--i~~~~~~~~~~~----~~~~g~~d~vid~~g~  242 (340)
T 3s2e_A          175 IGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVA--VNARDTDPAAWL----QKEIGGAHGVLVTAVS  242 (340)
T ss_dssp             CSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEE--EETTTSCHHHHH----HHHHSSEEEEEESSCC
T ss_pred             CCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEE--EeCCCcCHHHHH----HHhCCCCCEEEEeCCC
Confidence            4899999998888899999999999988877655332222  355443333332    2234689999999873

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=96.63  E-value=0.0058  Score=44.97  Aligned_cols=69  Identities=14%  Similarity=0.073  Sum_probs=47.4

Q ss_pred             CCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            3 QGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      +|++|...+..+...|++|+++++++++++.+.+-..-..  +| .+.+++...+.++.. ...+|++|.++|
T Consensus       198 ~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v--i~-~~~~~~~~~v~~~~~-g~g~D~vid~~g  266 (363)
T 3uog_A          198 TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHG--IN-RLEEDWVERVYALTG-DRGADHILEIAG  266 (363)
T ss_dssp             SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEE--EE-TTTSCHHHHHHHHHT-TCCEEEEEEETT
T ss_pred             CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEE--Ec-CCcccHHHHHHHHhC-CCCceEEEECCC
Confidence            7899999999888899999999999888776654222222  34 333344443333321 126999999998

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.61  E-value=0.02  Score=41.89  Aligned_cols=70  Identities=23%  Similarity=0.238  Sum_probs=46.1

Q ss_pred             CCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccC--ChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            3 QGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVL--SEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~--~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      +|++|...+..+...|+ +|+.+++++++++.+.+-..-.+  +|..  +.++....+.+...  +.+|++|.++|.
T Consensus       180 aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v--i~~~~~~~~~~~~~i~~~~~--~g~D~vid~~g~  252 (356)
T 1pl8_A          180 AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLV--LQISKESPQEIARKVEGQLG--CKPEVTIECTGA  252 (356)
T ss_dssp             CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEE--EECSSCCHHHHHHHHHHHHT--SCCSEEEECSCC
T ss_pred             CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEE--EcCcccccchHHHHHHHHhC--CCCCEEEECCCC
Confidence            48999999888888899 89999999887776654322222  3444  22233222222221  479999999984

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.60  E-value=0.0012  Score=47.03  Aligned_cols=61  Identities=16%  Similarity=0.281  Sum_probs=43.4

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCC----ceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDP----RFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+||+|++++..|++.|+ +|.+++|+.++.+++.++.    .+...  +.   +++.          ...|+||++.+.
T Consensus       133 GaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~--~~---~~l~----------~~aDiIInaTp~  197 (281)
T 3o8q_A          133 GAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQ--AF---EQLK----------QSYDVIINSTSA  197 (281)
T ss_dssp             CCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEE--EG---GGCC----------SCEEEEEECSCC
T ss_pred             CchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEe--eH---HHhc----------CCCCEEEEcCcC
Confidence            357999999999999997 9999999988877664421    12222  22   1111          378999999876


Q ss_pred             C
Q 042185           77 Q   77 (162)
Q Consensus        77 ~   77 (162)
                      .
T Consensus       198 g  198 (281)
T 3o8q_A          198 S  198 (281)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.59  E-value=0.012  Score=42.16  Aligned_cols=27  Identities=19%  Similarity=0.353  Sum_probs=24.4

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecCh
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSK   28 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~   28 (162)
                      |.||+|.++++.|+..|. ++.++|.+.
T Consensus        43 GaGGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           43 GVGGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             CCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             CcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            578999999999999997 899999874

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.58  E-value=0.0091  Score=44.39  Aligned_cols=35  Identities=23%  Similarity=0.140  Sum_probs=30.0

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ   36 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~   36 (162)
                      |.|.+|+.+++.+...|++|++.+++.++++.+.+
T Consensus       179 GaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~  213 (384)
T 1l7d_A          179 GVGVAGLQAIATAKRLGAVVMATDVRAATKEQVES  213 (384)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            46899999999999999999999999877666544

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.54  E-value=0.0073  Score=42.20  Aligned_cols=27  Identities=19%  Similarity=0.316  Sum_probs=24.7

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecCh
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSK   28 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~   28 (162)
                      |.||+|.++++.|+..|. +|.++|++.
T Consensus        38 G~Gg~G~~va~~La~~Gv~~i~lvD~d~   65 (249)
T 1jw9_B           38 GLGGLGCAASQYLASAGVGNLTLLDFDT   65 (249)
T ss_dssp             CCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             eeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence            578999999999999998 899999986

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=96.48  E-value=0.0055  Score=44.35  Aligned_cols=106  Identities=23%  Similarity=0.220  Sum_probs=60.2

Q ss_pred             CCCCchHHHHHHHHHHCC--CeEEEEecChhhHH--hhhcCCceeEEEeccCC---hHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASD--CRVVATGRSKATMA--DLEQDPRFFVQELDVLS---EQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g--~~vi~~~r~~~~~~--~~~~~~~~~~~~~D~~~---~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+|.+|..++..|+.+|  .+|+++|+++....  ++.+... .   .++..   .++.+..       +..-|++|++
T Consensus         7 Ga~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~-~---~~l~~~~~t~d~~~a-------~~~aDvVvi~   75 (314)
T 1mld_A            7 GASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIET-R---ATVKGYLGPEQLPDC-------LKGCDVVVIP   75 (314)
T ss_dssp             TTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSS-S---CEEEEEESGGGHHHH-------HTTCSEEEEC
T ss_pred             CCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCc-C---ceEEEecCCCCHHHH-------hCCCCEEEEC
Confidence            677999999999999888  58999999872111  2221111 0   11111   1223322       2366999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccc
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSV  126 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~  126 (162)
                      +|.....   ..+..+   .+..|+.....+.+.+.++   ..++.++++|-.
T Consensus        76 ag~~~~~---g~~r~d---l~~~n~~i~~~i~~~i~~~---~p~a~viv~sNP  119 (314)
T 1mld_A           76 AGVPRKP---GMTRDD---LFNTNATIVATLTAACAQH---CPDAMICIISNP  119 (314)
T ss_dssp             CSCCCCT---TCCGGG---GHHHHHHHHHHHHHHHHHH---CTTSEEEECSSC
T ss_pred             CCcCCCC---CCcHHH---HHHHHHHHHHHHHHHHHhh---CCCeEEEEECCC
Confidence            9974321   222222   3455665555555554332   345788887643

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.48  E-value=0.0075  Score=45.35  Aligned_cols=67  Identities=18%  Similarity=0.200  Sum_probs=49.9

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |.|-+|..+++.|.++|..|++++++++..+.+... ...++.+|.++.+.++.+      ...+.|.+|.+.+
T Consensus        11 G~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~-g~~vi~GDat~~~~L~~a------gi~~A~~viv~~~   77 (413)
T 3l9w_A           11 GFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF-GMKVFYGDATRMDLLESA------GAAKAEVLINAID   77 (413)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT-TCCCEESCTTCHHHHHHT------TTTTCSEEEECCS
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC-CCeEEEcCCCCHHHHHhc------CCCccCEEEECCC
Confidence            467899999999999999999999999988877543 355677888887655443      1124566666654

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.45  E-value=0.0084  Score=43.18  Aligned_cols=74  Identities=14%  Similarity=0.146  Sum_probs=49.3

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC------------CceeEEEeccCChHHHHHHH---HHHHHHcCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------------PRFFVQELDVLSEQSVQNVL---SNVLEKFGK   66 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~------------~~~~~~~~D~~~~~~i~~~~---~~~~~~~~~   66 (162)
                      |.|.+|..++..|++.|++|++.+|+++..+.+.+.            ....++-.=+.+..+++.++   +++.....+
T Consensus        28 G~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~  107 (310)
T 3doj_A           28 GLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDKGGVLEQICE  107 (310)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCT
T ss_pred             CccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCchhhhhccCC
Confidence            578899999999999999999999998877665432            11233333444555666666   555444434


Q ss_pred             ccEEEECCC
Q 042185           67 IDVLVNNAG   75 (162)
Q Consensus        67 id~vi~~ag   75 (162)
                      -.++|++..
T Consensus       108 g~~vv~~st  116 (310)
T 3doj_A          108 GKGYIDMST  116 (310)
T ss_dssp             TCEEEECSC
T ss_pred             CCEEEECCC
Confidence            455666654

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.35  E-value=0.012  Score=43.35  Aligned_cols=70  Identities=19%  Similarity=0.317  Sum_probs=47.7

Q ss_pred             CCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCC-hHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            3 QGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLS-EQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      +|++|...+..+...|+ +|+.+++++++++.+.+-..-.+  +|..+ .+++...+.++..  +.+|++|.++|.
T Consensus       200 aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v--i~~~~~~~~~~~~~~~~~~--~g~D~vid~~g~  271 (374)
T 2jhf_A          200 LGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATEC--VNPQDYKKPIQEVLTEMSN--GGVDFSFEVIGR  271 (374)
T ss_dssp             CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEE--ECGGGCSSCHHHHHHHHTT--SCBSEEEECSCC
T ss_pred             CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceE--ecccccchhHHHHHHHHhC--CCCcEEEECCCC
Confidence            58999999998888999 89999999888776654322222  34443 1234444444322  479999999985

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.33  E-value=0.044  Score=38.83  Aligned_cols=32  Identities=19%  Similarity=0.169  Sum_probs=28.1

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMAD   33 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~   33 (162)
                      |.|.+|..++..|++.|++|++.+++++.+++
T Consensus        11 GaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~   42 (283)
T 4e12_A           11 GTGVLGSQIAFQTAFHGFAVTAYDINTDALDA   42 (283)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSHHHHHH
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHH
Confidence            46789999999999999999999999876554

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.32  E-value=0.013  Score=42.94  Aligned_cols=69  Identities=17%  Similarity=0.228  Sum_probs=47.3

Q ss_pred             CCCCchHHHHHHHHHHC-CCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcC-CccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAAS-DCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFG-KIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~-~id~vi~~ag~   76 (162)
                      |+ |++|...+..+... |++|+.+++++++++.+.+-..-.+  +|..+.  +...+.++.  .+ .+|++|.++|.
T Consensus       194 Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v--i~~~~~--~~~~v~~~~--~g~g~Dvvid~~G~  264 (359)
T 1h2b_A          194 GV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHV--VDARRD--PVKQVMELT--RGRGVNVAMDFVGS  264 (359)
T ss_dssp             CC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEE--EETTSC--HHHHHHHHT--TTCCEEEEEESSCC
T ss_pred             CC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEE--Eeccch--HHHHHHHHh--CCCCCcEEEECCCC
Confidence            56 79999998888778 9999999999888777654332222  355443  333333332  13 69999999985

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.28  E-value=0.0088  Score=44.05  Aligned_cols=70  Identities=16%  Similarity=0.207  Sum_probs=45.9

Q ss_pred             CCCCchHHHHHHHHHH-CCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAA-SDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~-~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|++|...+..+.. .|++|+.+++++++++.+.+-..-.+  +|..+  ++...+.++  ..+.+|++|.++|.
T Consensus       179 Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~v--i~~~~--~~~~~v~~~--~~~g~Dvvid~~g~  249 (363)
T 4dvj_A          179 GGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHV--IDHSK--PLAAEVAAL--GLGAPAFVFSTTHT  249 (363)
T ss_dssp             STTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEE--ECTTS--CHHHHHHTT--CSCCEEEEEECSCH
T ss_pred             CCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEE--EeCCC--CHHHHHHHh--cCCCceEEEECCCc
Confidence            6799999888776655 58899999999888777655332222  24332  222222222  22479999999884

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.20  E-value=0.012  Score=43.53  Aligned_cols=66  Identities=21%  Similarity=0.194  Sum_probs=45.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+ |++|...+..+...|++|+.+++++++++.+.+-..-.+  +|..+.+.++    ++.   +.+|++|.++|.
T Consensus       202 Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~v--i~~~~~~~~~----~~~---~g~Dvvid~~g~  267 (369)
T 1uuf_A          202 GI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEV--VNSRNADEMA----AHL---KSFDFILNTVAA  267 (369)
T ss_dssp             CC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEE--EETTCHHHHH----TTT---TCEEEEEECCSS
T ss_pred             CC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEE--eccccHHHHH----Hhh---cCCCEEEECCCC
Confidence            54 789999998888899999999999887776654222122  3555543222    221   579999999985

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.18  E-value=0.0077  Score=42.82  Aligned_cols=74  Identities=18%  Similarity=0.140  Sum_probs=48.7

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC------------CceeEEEeccCChHHHHHHH---HHHHHHcCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------------PRFFVQELDVLSEQSVQNVL---SNVLEKFGK   66 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~------------~~~~~~~~D~~~~~~i~~~~---~~~~~~~~~   66 (162)
                      |.|.+|..++..|++.|++|++.+|++++.+.+.+.            ....++-.=+.+...++.++   +++.+...+
T Consensus         8 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l~~~l~~   87 (287)
T 3pdu_A            8 GLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGVLEGIGG   87 (287)
T ss_dssp             CCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGTCCT
T ss_pred             ccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhhhhcccC
Confidence            578999999999999999999999998876655331            11233333444555666666   555443334


Q ss_pred             ccEEEECCC
Q 042185           67 IDVLVNNAG   75 (162)
Q Consensus        67 id~vi~~ag   75 (162)
                      -.++|++..
T Consensus        88 g~~vv~~st   96 (287)
T 3pdu_A           88 GRGYIDMST   96 (287)
T ss_dssp             TCEEEECSC
T ss_pred             CCEEEECCC
Confidence            455666554

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.17  E-value=0.018  Score=41.25  Aligned_cols=74  Identities=15%  Similarity=0.130  Sum_probs=48.5

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC-------------CceeEEEeccCChHHHHHHH---HHHHHHcC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD-------------PRFFVQELDVLSEQSVQNVL---SNVLEKFG   65 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~-------------~~~~~~~~D~~~~~~i~~~~---~~~~~~~~   65 (162)
                      |.|.+|..++..|++.|++|++.+|+++..+.+.+.             ....++-.-+.+...++.++   +++.....
T Consensus        14 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~   93 (303)
T 3g0o_A           14 GLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGEDGVAHLMK   93 (303)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--CCCGGGSC
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChhhHHhhCC
Confidence            578899999999999999999999998877665332             12233334444455566665   44444333


Q ss_pred             CccEEEECCC
Q 042185           66 KIDVLVNNAG   75 (162)
Q Consensus        66 ~id~vi~~ag   75 (162)
                      +-.++|++..
T Consensus        94 ~g~ivv~~st  103 (303)
T 3g0o_A           94 PGSAVMVSST  103 (303)
T ss_dssp             TTCEEEECSC
T ss_pred             CCCEEEecCC
Confidence            4455666554

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.15  E-value=0.049  Score=38.64  Aligned_cols=74  Identities=15%  Similarity=0.128  Sum_probs=51.2

Q ss_pred             CCCchHHHHHHHHHHCCC---eEEEEecChhhHHhhhcCCc-------------eeEEEeccCChHHHHHHHHHHHHH-c
Q 042185            2 SQGGIGHALARAFAASDC---RVVATGRSKATMADLEQDPR-------------FFVQELDVLSEQSVQNVLSNVLEK-F   64 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~---~vi~~~r~~~~~~~~~~~~~-------------~~~~~~D~~~~~~i~~~~~~~~~~-~   64 (162)
                      |.|-+|.+++..|.+.|+   +|++.+|++++.+++.++..             ..++-.-+ .++.++.+++++... .
T Consensus        10 G~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav-~p~~~~~vl~~l~~~~l   88 (280)
T 3tri_A           10 GGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV-KPHQIKMVCEELKDILS   88 (280)
T ss_dssp             SCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS-CGGGHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe-CHHHHHHHHHHHHhhcc
Confidence            468899999999999998   89999999888776654311             12222222 456788888888765 4


Q ss_pred             CCccEEEECCCC
Q 042185           65 GKIDVLVNNAGV   76 (162)
Q Consensus        65 ~~id~vi~~ag~   76 (162)
                      .+=.+++++++.
T Consensus        89 ~~~~iiiS~~ag  100 (280)
T 3tri_A           89 ETKILVISLAVG  100 (280)
T ss_dssp             TTTCEEEECCTT
T ss_pred             CCCeEEEEecCC
Confidence            332377777654

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=96.14  E-value=0.022  Score=40.90  Aligned_cols=58  Identities=12%  Similarity=0.080  Sum_probs=43.8

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC------------CceeEEEeccCChHHHHHHHHH
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------------PRFFVQELDVLSEQSVQNVLSN   59 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~------------~~~~~~~~D~~~~~~i~~~~~~   59 (162)
                      |-|-+|..+|+.|++.|++|.+.+|++++.+.+.+.            ....++..=+.+.++++.++..
T Consensus        10 GlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~   79 (300)
T 3obb_A           10 GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLD   79 (300)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHS
T ss_pred             eehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhc
Confidence            457899999999999999999999998887765432            2344555556677777777654

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.12  E-value=0.0076  Score=44.04  Aligned_cols=61  Identities=13%  Similarity=0.151  Sum_probs=44.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+ |++|...+..+...|++|+.+++++++.+.+.+-..-..+    ++.+.++.          .+|++|.++|.
T Consensus       184 Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~----~~~~~~~~----------~~D~vid~~g~  244 (348)
T 3two_A          184 GF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFY----TDPKQCKE----------ELDFIISTIPT  244 (348)
T ss_dssp             SC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEE----SSGGGCCS----------CEEEEEECCCS
T ss_pred             CC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeec----CCHHHHhc----------CCCEEEECCCc
Confidence            54 8999999988888999999999998887776653322233    33333221          78999998885

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=96.11  E-value=0.026  Score=40.45  Aligned_cols=74  Identities=18%  Similarity=0.221  Sum_probs=43.6

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC------------CceeEEEeccCChHHHHHHH-HHHHHHcCCcc
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------------PRFFVQELDVLSEQSVQNVL-SNVLEKFGKID   68 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~------------~~~~~~~~D~~~~~~i~~~~-~~~~~~~~~id   68 (162)
                      |-|-+|..+|+.|+++|++|++.+|++++.+++.+.            ....++-+=+.+.+.++.++ ..+.....+-+
T Consensus        12 GLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~~~~~~~   91 (297)
T 4gbj_A           12 GLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVEKLGKDG   91 (297)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHHHHCTTC
T ss_pred             ecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHhhcCCCe
Confidence            457899999999999999999999998877655331            12334444556666666554 34444445556


Q ss_pred             EEEECCC
Q 042185           69 VLVNNAG   75 (162)
Q Consensus        69 ~vi~~ag   75 (162)
                      ++|.+.-
T Consensus        92 iiid~sT   98 (297)
T 4gbj_A           92 VHVSMST   98 (297)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            6665553

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.09  E-value=0.032  Score=41.15  Aligned_cols=74  Identities=16%  Similarity=0.250  Sum_probs=48.5

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCC------------ce---eEEEeccCChHHHHHHHHHHHHHcCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDP------------RF---FVQELDVLSEQSVQNVLSNVLEKFGK   66 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~------------~~---~~~~~D~~~~~~i~~~~~~~~~~~~~   66 (162)
                      |.|-+|..++..|++.|++|++.+|++++.+.+.+..            ..   .++-.=+.+. .++.+++++.....+
T Consensus        29 GlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~~vl~~l~~~l~~  107 (358)
T 4e21_A           29 GLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-VVDSMLQRMTPLLAA  107 (358)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-GHHHHHHHHGGGCCT
T ss_pred             CchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHHHHHHHHHhhCCC
Confidence            4688999999999999999999999988776654320            11   3332233333 666777666554444


Q ss_pred             ccEEEECCCC
Q 042185           67 IDVLVNNAGV   76 (162)
Q Consensus        67 id~vi~~ag~   76 (162)
                      =++||.+...
T Consensus       108 g~iiId~st~  117 (358)
T 4e21_A          108 NDIVIDGGNS  117 (358)
T ss_dssp             TCEEEECSSC
T ss_pred             CCEEEeCCCC
Confidence            4556665543

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.05  E-value=0.012  Score=43.44  Aligned_cols=71  Identities=14%  Similarity=0.188  Sum_probs=48.5

Q ss_pred             CCCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCC-hHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLS-EQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+ |++|...+..+...|+ +|+.+++++++++.+.+-..-.+  +|..+ .+++.+.+.++.  .+.+|++|.++|.
T Consensus       201 Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v--i~~~~~~~~~~~~i~~~~--~gg~D~vid~~g~  273 (378)
T 3uko_A          201 GL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEF--VNPKDHDKPIQEVIVDLT--DGGVDYSFECIGN  273 (378)
T ss_dssp             CC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEE--ECGGGCSSCHHHHHHHHT--TSCBSEEEECSCC
T ss_pred             CC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEE--EccccCchhHHHHHHHhc--CCCCCEEEECCCC
Confidence            55 8999999888888899 89999999988876654332222  34432 233444444432  2479999999984

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.02  E-value=0.0064  Score=44.68  Aligned_cols=67  Identities=19%  Similarity=0.116  Sum_probs=45.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+ |++|...+..+...|++|+.+++++++++.+.+-..-.+  +|..+..+.   .+++.   +.+|++|.++|.
T Consensus       187 Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v--~~~~~~~~~---~~~~~---~~~D~vid~~g~  253 (360)
T 1piw_A          187 GL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHY--IATLEEGDW---GEKYF---DTFDLIVVCASS  253 (360)
T ss_dssp             CC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEE--EEGGGTSCH---HHHSC---SCEEEEEECCSC
T ss_pred             CC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEE--EcCcCchHH---HHHhh---cCCCEEEECCCC
Confidence            66 999999998888889999999998887766654222222  344333011   12221   589999999985

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.02  E-value=0.036  Score=40.88  Aligned_cols=70  Identities=9%  Similarity=-0.016  Sum_probs=45.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|++|...+..+...|++|+.+. ++++++.+.+-..-.+  +|..+.+ +...+.++.  .+++|++|.++|.
T Consensus       172 Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~v--i~~~~~~-~~~~v~~~t--~g~~d~v~d~~g~  241 (371)
T 3gqv_A          172 GGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAEEV--FDYRAPN-LAQTIRTYT--KNNLRYALDCITN  241 (371)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEE--EETTSTT-HHHHHHHHT--TTCCCEEEESSCS
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCcEE--EECCCch-HHHHHHHHc--cCCccEEEECCCc
Confidence            6779999999998889999998886 5666665544332222  3554443 333233221  2469999999985

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.01  E-value=0.014  Score=42.79  Aligned_cols=66  Identities=18%  Similarity=0.133  Sum_probs=45.2

Q ss_pred             CCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            3 QGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      +|++|...+..+...|++|+.++++.++++.+..+..... .+|..+.+.+       .+..+.+|++|.++|.
T Consensus       189 aG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~-vi~~~~~~~~-------~~~~~g~D~vid~~g~  254 (357)
T 2cf5_A          189 LGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADD-YVIGSDQAKM-------SELADSLDYVIDTVPV  254 (357)
T ss_dssp             CSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSC-EEETTCHHHH-------HHSTTTEEEEEECCCS
T ss_pred             CCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCce-eeccccHHHH-------HHhcCCCCEEEECCCC
Confidence            5899999998888889999999999888776653322221 1344443322       2223579999999985

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.01  E-value=0.033  Score=38.85  Aligned_cols=72  Identities=21%  Similarity=0.276  Sum_probs=51.3

Q ss_pred             CCCCchHHHHHHHHHHC-CCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAAS-DCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |++|.+|+.+++.+.+. ++.|+.+....+.++++.. .... +.+|++.++.....+..+.+.  .+++|+-..|.
T Consensus         7 Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~-~~~D-vvIDfT~p~a~~~~~~~a~~~--g~~~VigTTG~   79 (245)
T 1p9l_A            7 GAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD-GNTE-VVIDFTHPDVVMGNLEFLIDN--GIHAVVGTTGF   79 (245)
T ss_dssp             TTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH-TTCC-EEEECSCTTTHHHHHHHHHHT--TCEEEECCCCC
T ss_pred             CCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc-cCCc-EEEEccChHHHHHHHHHHHHc--CCCEEEcCCCC
Confidence            67899999999999866 8887754433333333332 1334 558999999998888887664  67888888874

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.00  E-value=0.036  Score=39.61  Aligned_cols=72  Identities=11%  Similarity=0.123  Sum_probs=46.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhh-HHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKAT-MADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~-~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||.|.||.+++..|.+.|++|++++|+.+. ..+...+..+.++.+-   ...+..+++++.....+=.+|+.+++
T Consensus        28 Gg~G~mG~~la~~l~~~G~~V~~~~~~~~~~~~~~~~~aDvVilavp---~~~~~~vl~~l~~~l~~~~iv~~~~s  100 (298)
T 2pv7_A           28 GGYGKLGGLFARYLRASGYPISILDREDWAVAESILANADVVIVSVP---INLTLETIERLKPYLTENMLLADLTS  100 (298)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHTTCSEEEECSC---GGGHHHHHHHHGGGCCTTSEEEECCS
T ss_pred             cCCCHHHHHHHHHHHhCCCeEEEEECCcccCHHHHhcCCCEEEEeCC---HHHHHHHHHHHHhhcCCCcEEEECCC
Confidence            358999999999999999999999998653 3333344555555443   23467777776543322224444444

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=95.89  E-value=0.071  Score=40.44  Aligned_cols=106  Identities=17%  Similarity=0.167  Sum_probs=65.3

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHH------------cCCccE
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK------------FGKIDV   69 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~------------~~~id~   69 (162)
                      |.|.+|..++..|++.|++|+.+|.++++.+.+.++.... .  +    ..++.++.+..+.            ...-|+
T Consensus        28 GlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi-~--E----pgl~ell~~~~~~g~l~~tt~~~~ai~~ad~  100 (444)
T 3vtf_A           28 GLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHI-Y--E----PGLEEALGRALSSGRLSFAESAEEAVAATDA  100 (444)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSS-C--C----TTHHHHHHHHHHTTCEEECSSHHHHHHTSSE
T ss_pred             ccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCC-C--C----CCHHHHHHHHHHcCCeeEEcCHHHHHhcCCc
Confidence            5789999999999999999999999999988886642211 1  1    2334444333221            123488


Q ss_pred             EEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccc
Q 042185           70 LVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSV  126 (162)
Q Consensus        70 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~  126 (162)
                      +|.+.+.... .-.           ..++......++.+.+.++...++.+|++-|.
T Consensus       101 ~~I~VpTP~~-~d~-----------~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eST  145 (444)
T 3vtf_A          101 TFIAVGTPPA-PDG-----------SADLRYVEAAARAVGRGIRAKGRWHLVVVKST  145 (444)
T ss_dssp             EEECCCCCBC-TTS-----------SBCCHHHHHHHHHHHHHHHHHCSCCEEEECSC
T ss_pred             eEEEecCCCC-CCC-----------CCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCC
Confidence            8888875211 111           12334444455666666765555666666543

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.88  E-value=0.0083  Score=42.51  Aligned_cols=62  Identities=27%  Similarity=0.374  Sum_probs=44.6

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      |.|++|++++..|.+.|++|.+.+|+.++.+++.++..+..  .+  +.   .       +.....|+||++.+..
T Consensus       136 GaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~--~~--~~---~-------~~~~~aDiVi~atp~~  197 (275)
T 2hk9_A          136 GAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEV--VN--SP---E-------EVIDKVQVIVNTTSVG  197 (275)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEE--CS--CG---G-------GTGGGCSEEEECSSTT
T ss_pred             CchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCee--eh--hH---H-------hhhcCCCEEEEeCCCC
Confidence            46899999999999999999999999988777765443221  11  11   1       1123679999999764

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=95.83  E-value=0.022  Score=41.98  Aligned_cols=70  Identities=20%  Similarity=0.294  Sum_probs=46.5

Q ss_pred             CCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCC-hHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            3 QGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLS-EQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      +|++|...+..+...|+ +|+.+++++++++.+.+-..-.+  +|..+ .+++...+.++.  .+.+|++|.++|.
T Consensus       200 aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v--i~~~~~~~~~~~~i~~~t--~gg~Dvvid~~g~  271 (373)
T 1p0f_A          200 LGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATEC--LNPKDYDKPIYEVICEKT--NGGVDYAVECAGR  271 (373)
T ss_dssp             CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEE--ECGGGCSSCHHHHHHHHT--TSCBSEEEECSCC
T ss_pred             CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEE--EecccccchHHHHHHHHh--CCCCCEEEECCCC
Confidence            58999999888777899 89999999888776654322222  34432 123333333332  2479999999984

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=95.80  E-value=0.012  Score=43.50  Aligned_cols=72  Identities=19%  Similarity=0.190  Sum_probs=46.0

Q ss_pred             CCCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHH-HHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVL-EKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~-~~~~~id~vi~~ag~   76 (162)
                      |+ |++|...+..+...|+ +|+.+++++++.+.+.+-..-..  .|.++.+ +...+.+.. ...+.+|++|.++|.
T Consensus       190 Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v--i~~~~~~-~~~~i~~~~~~~~gg~Dvvid~~G~  263 (370)
T 4ej6_A          190 GG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATAT--VDPSAGD-VVEAIAGPVGLVPGGVDVVIECAGV  263 (370)
T ss_dssp             CC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEE--ECTTSSC-HHHHHHSTTSSSTTCEEEEEECSCC
T ss_pred             CC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEE--ECCCCcC-HHHHHHhhhhccCCCCCEEEECCCC
Confidence            55 8999999988888999 89999999887776544222222  3544433 222222210 122479999999884

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=95.80  E-value=0.05  Score=38.02  Aligned_cols=75  Identities=20%  Similarity=0.293  Sum_probs=48.6

Q ss_pred             CCCchHHHHHHHHHHCCCe-EEEEecChhhHHhhhcCC-------------ceeEEEeccCChHHHHHHHHHHHHHcCCc
Q 042185            2 SQGGIGHALARAFAASDCR-VVATGRSKATMADLEQDP-------------RFFVQELDVLSEQSVQNVLSNVLEKFGKI   67 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~-vi~~~r~~~~~~~~~~~~-------------~~~~~~~D~~~~~~i~~~~~~~~~~~~~i   67 (162)
                      |.|.+|..++..|.+.|++ |.+.+|+++..+++.+..             ...++-.- ...+.++.+++++.....+=
T Consensus        17 G~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~a-v~~~~~~~v~~~l~~~~~~~   95 (266)
T 3d1l_A           17 GAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVS-LKDSAFAELLQGIVEGKREE   95 (266)
T ss_dssp             CCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEEC-CCHHHHHHHHHHHHTTCCTT
T ss_pred             cCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEe-cCHHHHHHHHHHHHhhcCCC
Confidence            4688999999999999998 889999988766553321             11222111 23445677787776544333


Q ss_pred             cEEEECCCCC
Q 042185           68 DVLVNNAGVQ   77 (162)
Q Consensus        68 d~vi~~ag~~   77 (162)
                      .+++++....
T Consensus        96 ~ivv~~s~~~  105 (266)
T 3d1l_A           96 ALMVHTAGSI  105 (266)
T ss_dssp             CEEEECCTTS
T ss_pred             cEEEECCCCC
Confidence            4677776653

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=95.79  E-value=0.018  Score=42.16  Aligned_cols=67  Identities=18%  Similarity=0.280  Sum_probs=45.7

Q ss_pred             CCCCchHHHH-HHHH-HHCCCe-EEEEecChh---hHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHAL-ARAF-AASDCR-VVATGRSKA---TMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~i-a~~l-~~~g~~-vi~~~r~~~---~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      |+ |++|... +..+ ...|++ |+.++++.+   +++.+.+ .....+  |..+.+ +.+ +.++   .+.+|++|.++
T Consensus       180 Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~-lGa~~v--~~~~~~-~~~-i~~~---~gg~Dvvid~~  250 (357)
T 2b5w_A          180 GN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE-LDATYV--DSRQTP-VED-VPDV---YEQMDFIYEAT  250 (357)
T ss_dssp             CC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH-TTCEEE--ETTTSC-GGG-HHHH---SCCEEEEEECS
T ss_pred             CC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH-cCCccc--CCCccC-HHH-HHHh---CCCCCEEEECC
Confidence            56 8999998 7766 567997 999999887   7766654 233333  555432 333 4443   24799999999


Q ss_pred             CC
Q 042185           75 GV   76 (162)
Q Consensus        75 g~   76 (162)
                      |.
T Consensus       251 g~  252 (357)
T 2b5w_A          251 GF  252 (357)
T ss_dssp             CC
T ss_pred             CC
Confidence            84

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=95.74  E-value=0.01  Score=44.40  Aligned_cols=63  Identities=17%  Similarity=0.315  Sum_probs=43.1

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |.|++|+.+++.|...|+ +|++++|+.++.+++..+.....  .+.   +++...+       ...|+||.+.+.
T Consensus       174 GaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~--~~~---~~l~~~l-------~~aDvVi~at~~  237 (404)
T 1gpj_A          174 GAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEA--VRF---DELVDHL-------ARSDVVVSATAA  237 (404)
T ss_dssp             SCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEE--CCG---GGHHHHH-------HTCSEEEECCSS
T ss_pred             ChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCce--ecH---HhHHHHh-------cCCCEEEEccCC
Confidence            359999999999999999 99999999887654433222222  222   2333322       267999999874

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=95.65  E-value=0.0066  Score=44.17  Aligned_cols=52  Identities=8%  Similarity=-0.024  Sum_probs=42.7

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHH
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNV   56 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~   56 (162)
                      |.|.+|..+++.|.++|. |++++++++..+ +.+ ....++.+|.++++.++++
T Consensus       122 G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~-~~~~~i~gd~~~~~~L~~a  173 (336)
T 1lnq_A          122 GWSESTLECLRELRGSEV-FVLAEDENVRKK-VLR-SGANFVHGDPTRVSDLEKA  173 (336)
T ss_dssp             SCCHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH-TTCEEEESCTTSHHHHHHT
T ss_pred             CCcHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh-CCcEEEEeCCCCHHHHHhc
Confidence            357899999999999999 999999998887 543 4577888999888766543

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=95.65  E-value=0.038  Score=39.66  Aligned_cols=74  Identities=19%  Similarity=0.180  Sum_probs=48.5

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC------------CceeEEEeccCChHHHHHHHH--HHHHHcCCc
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------------PRFFVQELDVLSEQSVQNVLS--NVLEKFGKI   67 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~------------~~~~~~~~D~~~~~~i~~~~~--~~~~~~~~i   67 (162)
                      |.|-+|..+++.|++.|++|++.+|++++.+.+.+.            ....++-.=+.+...++.++.  .+.. ..+-
T Consensus        16 G~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~~l~~-~~~g   94 (306)
T 3l6d_A           16 GLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLGMPGVAR-ALAH   94 (306)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHTSTTHHH-HTTT
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhcccchhh-ccCC
Confidence            468899999999999999999999998876654321            112344444455556676665  4422 2344


Q ss_pred             cEEEECCCC
Q 042185           68 DVLVNNAGV   76 (162)
Q Consensus        68 d~vi~~ag~   76 (162)
                      .++|++...
T Consensus        95 ~ivid~st~  103 (306)
T 3l6d_A           95 RTIVDYTTN  103 (306)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            556666543

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=95.61  E-value=0.05  Score=39.60  Aligned_cols=69  Identities=13%  Similarity=0.136  Sum_probs=45.3

Q ss_pred             CCCCchHHHHHHHHHHC--CCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAAS--DCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+ |++|...+..+...  |++|+.+++++++++.+.+-..-.+  +|..+.   ....+++.+ ...+|++|.++|.
T Consensus       178 Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v--i~~~~~---~~~~~~~~~-g~g~D~vid~~g~  248 (344)
T 2h6e_A          178 GI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYV--SEMKDA---ESLINKLTD-GLGASIAIDLVGT  248 (344)
T ss_dssp             CC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEE--ECHHHH---HHHHHHHHT-TCCEEEEEESSCC
T ss_pred             CC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEE--eccccc---hHHHHHhhc-CCCccEEEECCCC
Confidence            56 89999999888888  9999999999888776654222222  233220   122333322 2279999999984

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=95.60  E-value=0.037  Score=41.19  Aligned_cols=69  Identities=16%  Similarity=0.265  Sum_probs=46.7

Q ss_pred             CCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcC-CccEEEECCCC
Q 042185            3 QGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFG-KIDVLVNNAGV   76 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~-~id~vi~~ag~   76 (162)
                      +|++|...+..+...|+ +|+.++++.++++.+.+-. ..  .+|..+.+.+...+.++.  .+ .+|++|.++|.
T Consensus       194 aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lG-a~--~i~~~~~~~~~~~~~~~~--~g~g~Dvvid~~g~  264 (398)
T 2dph_A          194 AGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAG-FE--TIDLRNSAPLRDQIDQIL--GKPEVDCGVDAVGF  264 (398)
T ss_dssp             CSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTT-CE--EEETTSSSCHHHHHHHHH--SSSCEEEEEECSCT
T ss_pred             CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcC-Cc--EEcCCCcchHHHHHHHHh--CCCCCCEEEECCCC
Confidence            48999998887777899 8999999998887765433 33  346554332122222221  23 69999999985

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=95.58  E-value=0.021  Score=39.65  Aligned_cols=34  Identities=12%  Similarity=0.330  Sum_probs=29.9

Q ss_pred             CCCchHHHHHHHHHHCCC----eEEEEecChhhHHhhh
Q 042185            2 SQGGIGHALARAFAASDC----RVVATGRSKATMADLE   35 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~----~vi~~~r~~~~~~~~~   35 (162)
                      |.|.+|.+++..|.+.|+    +|++.+|++++.+++.
T Consensus         9 G~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~   46 (247)
T 3gt0_A            9 GCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNAS   46 (247)
T ss_dssp             CCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHH
T ss_pred             CccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHH
Confidence            578899999999999998    9999999988776654

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=95.56  E-value=0.033  Score=41.52  Aligned_cols=71  Identities=15%  Similarity=0.136  Sum_probs=46.4

Q ss_pred             CCCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+ |++|...+..+...|+ +|+.+++++++++.+++-..-.+  +|..+.+ +...+.++.. ...+|++|.++|.
T Consensus       221 Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v--i~~~~~~-~~~~i~~~t~-g~g~D~vid~~g~  292 (404)
T 3ip1_A          221 GG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHV--IDPTKEN-FVEAVLDYTN-GLGAKLFLEATGV  292 (404)
T ss_dssp             CC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEE--ECTTTSC-HHHHHHHHTT-TCCCSEEEECSSC
T ss_pred             CC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEE--EcCCCCC-HHHHHHHHhC-CCCCCEEEECCCC
Confidence            55 8999999888888999 89999999888776654332222  3444433 2222222211 1269999999985

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=95.54  E-value=0.0032  Score=45.63  Aligned_cols=70  Identities=17%  Similarity=0.113  Sum_probs=43.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |++|++|...+..+...|++|+.+++++++++.+.+-..-.++  |..+.+  ...+.++  ..+.+|++|.++|.
T Consensus       158 Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~--~~~~~~--~~~~~~~--~~~~~d~vid~~g~  227 (330)
T 1tt7_A          158 GATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVI--SREDVY--DGTLKAL--SKQQWQGAVDPVGG  227 (330)
T ss_dssp             STTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEE--EHHHHC--SSCCCSS--CCCCEEEEEESCCT
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEE--ECCCch--HHHHHHh--hcCCccEEEECCcH
Confidence            6789999999998888899999999987776655432211222  322110  0001111  11368999999873

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=95.53  E-value=0.05  Score=40.41  Aligned_cols=71  Identities=18%  Similarity=0.243  Sum_probs=47.6

Q ss_pred             CCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            3 QGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      +|++|...+..+...|+ +|+.+++++++++.+.+-. ..  .+|.++.+.+...+.++.. ...+|++|.++|..
T Consensus       194 aG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lG-a~--~i~~~~~~~~~~~v~~~t~-g~g~Dvvid~~G~~  265 (398)
T 1kol_A          194 AGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQG-FE--IADLSLDTPLHEQIAALLG-EPEVDCAVDAVGFE  265 (398)
T ss_dssp             CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTT-CE--EEETTSSSCHHHHHHHHHS-SSCEEEEEECCCTT
T ss_pred             CcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcC-Cc--EEccCCcchHHHHHHHHhC-CCCCCEEEECCCCc
Confidence            58999999888878899 7999999998877765433 23  2465544333333333211 12699999999863

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=95.52  E-value=0.013  Score=42.28  Aligned_cols=67  Identities=12%  Similarity=0.054  Sum_probs=44.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |++|++|...+..+...|++|+.+++++++.+.+.+-..-.++  |..+.+.    ++++  ..+.+|++|.++|
T Consensus       154 Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi--~~~~~~~----~~~~--~~~~~d~v~d~~g  220 (324)
T 3nx4_A          154 GASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRIL--SRDEFAE----SRPL--EKQLWAGAIDTVG  220 (324)
T ss_dssp             STTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEE--EGGGSSC----CCSS--CCCCEEEEEESSC
T ss_pred             CCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEE--ecCCHHH----HHhh--cCCCccEEEECCC
Confidence            6789999999998889999999999998887766542222222  3222211    1111  1246888888876

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=95.52  E-value=0.069  Score=36.09  Aligned_cols=66  Identities=11%  Similarity=0.202  Sum_probs=45.0

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |.|.+|.+++..|++.|++|++.+|+++    ...+..+.++.+  - ..+++.+++++..... =..++.++.
T Consensus        26 G~G~mG~~la~~l~~~g~~V~~~~~~~~----~~~~aD~vi~av--~-~~~~~~v~~~l~~~~~-~~~vi~~~~   91 (209)
T 2raf_A           26 GKGNMGQAIGHNFEIAGHEVTYYGSKDQ----ATTLGEIVIMAV--P-YPALAALAKQYATQLK-GKIVVDITN   91 (209)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECTTCC----CSSCCSEEEECS--C-HHHHHHHHHHTHHHHT-TSEEEECCC
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEcCCHH----HhccCCEEEEcC--C-cHHHHHHHHHHHHhcC-CCEEEEECC
Confidence            4789999999999999999999999866    222333444333  2 5667788887765543 234555544

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=95.48  E-value=0.13  Score=37.08  Aligned_cols=34  Identities=12%  Similarity=0.231  Sum_probs=29.3

Q ss_pred             CCCchHHHHHHHHHHCCC--eEEEEecChhhHHhhh
Q 042185            2 SQGGIGHALARAFAASDC--RVVATGRSKATMADLE   35 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~--~vi~~~r~~~~~~~~~   35 (162)
                      |.|.||..+++.|.+.|+  +|++.+|+++..+.+.
T Consensus        40 G~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~   75 (314)
T 3ggo_A           40 GVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV   75 (314)
T ss_dssp             SCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH
T ss_pred             eeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence            478999999999999999  9999999987766543

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=95.48  E-value=0.085  Score=40.49  Aligned_cols=75  Identities=15%  Similarity=0.184  Sum_probs=51.1

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCC--------------------ceeEEEeccCChHHHHHHHHHHH
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDP--------------------RFFVQELDVLSEQSVQNVLSNVL   61 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~--------------------~~~~~~~D~~~~~~i~~~~~~~~   61 (162)
                      |.|-+|.+++..|+++|++|++.+|+++..+++.+..                    ...++-+=+...+.++.+++++.
T Consensus        11 GlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl~~l~   90 (484)
T 4gwg_A           11 GLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVDDFIEKLV   90 (484)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHHHHHHHHHG
T ss_pred             ChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHHHHHHHHHH
Confidence            4688999999999999999999999988776653320                    12333333444456777777776


Q ss_pred             HHcCCccEEEECCCC
Q 042185           62 EKFGKIDVLVNNAGV   76 (162)
Q Consensus        62 ~~~~~id~vi~~ag~   76 (162)
                      ....+=++||.+...
T Consensus        91 ~~L~~g~iIId~st~  105 (484)
T 4gwg_A           91 PLLDTGDIIIDGGNS  105 (484)
T ss_dssp             GGCCTTCEEEECSCC
T ss_pred             HhcCCCCEEEEcCCC
Confidence            655555666665543

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=95.45  E-value=0.021  Score=44.55  Aligned_cols=55  Identities=15%  Similarity=0.114  Sum_probs=45.9

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHH
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNV   56 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~   56 (162)
                      |.|-+|..+++.|.++|..|++++.+++..+++.+...+.++.+|.++++.++++
T Consensus       134 G~g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a  188 (565)
T 4gx0_A          134 GIDPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGL  188 (565)
T ss_dssp             SCCHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHT
T ss_pred             CCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhc
Confidence            4567899999999999999999999999888876654678888898887766543

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=95.41  E-value=0.044  Score=39.89  Aligned_cols=70  Identities=14%  Similarity=0.123  Sum_probs=44.5

Q ss_pred             CCCCchHHHHHHHHHHC-CCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAAS-DCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+ |++|...+..+... |++|+.+++++++++.+.+-..-.++  |..+ + ..+.+.+... ...+|++|.+.|.
T Consensus       179 Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i--~~~~-~-~~~~v~~~t~-g~g~d~v~d~~G~  249 (345)
T 3jv7_A          179 GV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAV--KSGA-G-AADAIRELTG-GQGATAVFDFVGA  249 (345)
T ss_dssp             CC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEE--ECST-T-HHHHHHHHHG-GGCEEEEEESSCC
T ss_pred             CC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEE--cCCC-c-HHHHHHHHhC-CCCCeEEEECCCC
Confidence            44 89999888777666 67999999999888777653332333  3222 2 2222222211 1279999999985

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=95.35  E-value=0.096  Score=37.04  Aligned_cols=73  Identities=14%  Similarity=0.153  Sum_probs=45.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCC-----------ceeEEEeccCChHHHHHHHHHHHHHcCCccE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDP-----------RFFVQELDVLSEQSVQNVLSNVLEKFGKIDV   69 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~-----------~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~   69 (162)
                      |++|.+|.+++..|.+.|++|++.+|+++..+.+.+..           ...++-.- ...+.++.+++++.....+=.+
T Consensus        18 G~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~aDvVi~a-v~~~~~~~v~~~l~~~l~~~~i   96 (286)
T 3c24_A           18 GAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLTDGDGWIDEADVVVLA-LPDNIIEKVAEDIVPRVRPGTI   96 (286)
T ss_dssp             TTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCCCSSGGGGTCSEEEEC-SCHHHHHHHHHHHGGGSCTTCE
T ss_pred             CCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcCCHHHHhcCCCEEEEc-CCchHHHHHHHHHHHhCCCCCE
Confidence            44589999999999999999999999987766543210           11222111 2334567777776544332234


Q ss_pred             EEECC
Q 042185           70 LVNNA   74 (162)
Q Consensus        70 vi~~a   74 (162)
                      ++++.
T Consensus        97 vv~~s  101 (286)
T 3c24_A           97 VLILD  101 (286)
T ss_dssp             EEESC
T ss_pred             EEECC
Confidence            55544

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=95.33  E-value=0.011  Score=42.41  Aligned_cols=102  Identities=12%  Similarity=0.084  Sum_probs=59.2

Q ss_pred             CCCCchHHHHHHHHHHCCC--eEEEEecChhhHHh----hhcC-----CceeEEEeccCChHHHHHHHHHHHHHcCCccE
Q 042185            1 CSQGGIGHALARAFAASDC--RVVATGRSKATMAD----LEQD-----PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDV   69 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~--~vi~~~r~~~~~~~----~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~   69 (162)
                      |+ |.+|.+++..|+.+|.  +|++.|+++++++.    +...     ....+...  +|.+           .+..-|+
T Consensus         7 Ga-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~-----------a~~~aDi   72 (294)
T 1oju_A            7 GA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS-----------LLKGSEI   72 (294)
T ss_dssp             CC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGG-----------GGTTCSE
T ss_pred             CC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHH-----------HhCCCCE
Confidence            45 8999999999999887  89999999876541    1110     11111111  1222           2235699


Q ss_pred             EEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhh-cCCCeEEEeccc
Q 042185           70 LVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY-RKKGKIINVGSV  126 (162)
Q Consensus        70 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~isS~  126 (162)
                      +|.++|.... +  .++..+   .+..|..    +++.+.+.+.+ .+++.++++|-.
T Consensus        73 VViaag~~~k-p--G~~R~d---l~~~N~~----i~~~i~~~i~~~~p~a~iivvsNP  120 (294)
T 1oju_A           73 IVVTAGLARK-P--GMTRLD---LAHKNAG----IIKDIAKKIVENAPESKILVVTNP  120 (294)
T ss_dssp             EEECCCCCCC-S--SCCHHH---HHHHHHH----HHHHHHHHHHTTSTTCEEEECSSS
T ss_pred             EEECCCCCCC-C--CCcHHH---HHHHHHH----HHHHHHHHHHhhCCCeEEEEeCCc
Confidence            9999986421 1  234433   3455544    34444444443 345777777753

>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}

Probab=95.31  E-value=0.083  Score=40.67  Aligned_cols=74  Identities=15%  Similarity=0.184  Sum_probs=50.5

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-C---Cc----------------eeEEEeccCChHHHHHHHHHHH
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-D---PR----------------FFVQELDVLSEQSVQNVLSNVL   61 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-~---~~----------------~~~~~~D~~~~~~i~~~~~~~~   61 (162)
                      |.|-+|.+++..|+++|++|.+.+|++++.+++.+ .   ..                ..++-+=+.+...++.+++++.
T Consensus        17 GlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl~~l~   96 (497)
T 2p4q_A           17 GLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVDALINQIV   96 (497)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHHHHHHHHHG
T ss_pred             eeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHHHHHHHHH
Confidence            56889999999999999999999999887766543 1   00                2333333444456777777776


Q ss_pred             HHcCCccEEEECCC
Q 042185           62 EKFGKIDVLVNNAG   75 (162)
Q Consensus        62 ~~~~~id~vi~~ag   75 (162)
                      ....+=++||.+..
T Consensus        97 ~~l~~g~iIId~s~  110 (497)
T 2p4q_A           97 PLLEKGDIIIDGGN  110 (497)
T ss_dssp             GGCCTTCEEEECSC
T ss_pred             HhCCCCCEEEECCC
Confidence            54444456666554

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=95.28  E-value=0.12  Score=36.69  Aligned_cols=34  Identities=15%  Similarity=0.229  Sum_probs=29.6

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLE   35 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~   35 (162)
                      |.|.+|..++..|++.|++|++.+|+++..+.+.
T Consensus        10 G~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~   43 (316)
T 2ew2_A           10 GAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIR   43 (316)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH
Confidence            4689999999999999999999999987766553

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.27  E-value=0.022  Score=40.64  Aligned_cols=61  Identities=21%  Similarity=0.287  Sum_probs=42.0

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |.|.||+++++.|...|++|++.+|+.+..+.+.+ ....+.  +   .++++.+       ...-|+|+++..
T Consensus       162 G~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~~~--~---~~~l~~~-------l~~aDvVi~~~p  222 (293)
T 3d4o_A          162 GLGRVGMSVARKFAALGAKVKVGARESDLLARIAE-MGMEPF--H---ISKAAQE-------LRDVDVCINTIP  222 (293)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTSEEE--E---GGGHHHH-------TTTCSEEEECCS
T ss_pred             eeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-CCCeec--C---hhhHHHH-------hcCCCEEEECCC
Confidence            46899999999999999999999999876554432 122222  2   1222222       346799999875

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=95.27  E-value=0.17  Score=35.45  Aligned_cols=73  Identities=15%  Similarity=0.159  Sum_probs=45.8

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCc-------------eeEEEeccCChHHHHHHHHHHHHHcCCcc
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPR-------------FFVQELDVLSEQSVQNVLSNVLEKFGKID   68 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~-------------~~~~~~D~~~~~~i~~~~~~~~~~~~~id   68 (162)
                      |.|.+|.+++..|.+.|++|++.+|+++..+.+.+...             ..++-+- ...+.+..+++++.....+=.
T Consensus         7 G~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~vi~a-v~~~~~~~~~~~l~~~~~~~~   85 (279)
T 2f1k_A            7 GLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLC-TPIQLILPTLEKLIPHLSPTA   85 (279)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEEC-SCHHHHHHHHHHHGGGSCTTC
T ss_pred             cCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHhCCCCEEEEE-CCHHHHHHHHHHHHhhCCCCC
Confidence            47899999999999999999999999877665432111             1111111 234456777777655443333


Q ss_pred             EEEECCC
Q 042185           69 VLVNNAG   75 (162)
Q Consensus        69 ~vi~~ag   75 (162)
                      ++++.++
T Consensus        86 ~vv~~~~   92 (279)
T 2f1k_A           86 IVTDVAS   92 (279)
T ss_dssp             EEEECCS
T ss_pred             EEEECCC
Confidence            4555533

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=95.26  E-value=0.3  Score=35.46  Aligned_cols=101  Identities=16%  Similarity=0.098  Sum_probs=59.9

Q ss_pred             CCchHHHHHHHHHHCCC--eEEEEecChhhHHh----hhcC-----CceeEEEeccCChHHHHHHHHHHHHHcCCccEEE
Q 042185            3 QGGIGHALARAFAASDC--RVVATGRSKATMAD----LEQD-----PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLV   71 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~--~vi~~~r~~~~~~~----~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi   71 (162)
                      .|.+|.+++..|+..|.  +|+++|+++++++.    +...     ..+.....|   .           +.+..-|++|
T Consensus        13 aG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~-----------~a~~~aDvVv   78 (326)
T 3pqe_A           13 AGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y-----------EDCKDADIVC   78 (326)
T ss_dssp             CSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G-----------GGGTTCSEEE
T ss_pred             CCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H-----------HHhCCCCEEE
Confidence            58999999999999886  89999999876553    2221     122222211   1           1234679999


Q ss_pred             ECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccc
Q 042185           72 NNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSV  126 (162)
Q Consensus        72 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~  126 (162)
                      .++|... .+  .++..   ..+..|..-...+.+.+.+   ..+++.++++|-.
T Consensus        79 i~ag~p~-kp--G~~R~---dL~~~N~~Iv~~i~~~I~~---~~p~a~vlvvtNP  124 (326)
T 3pqe_A           79 ICAGANQ-KP--GETRL---ELVEKNLKIFKGIVSEVMA---SGFDGIFLVATNP  124 (326)
T ss_dssp             ECCSCCC-CT--TCCHH---HHHHHHHHHHHHHHHHHHH---TTCCSEEEECSSS
T ss_pred             EecccCC-CC--CccHH---HHHHHHHHHHHHHHHHHHH---hcCCeEEEEcCCh
Confidence            9999632 11  23333   3355565544444444433   2345677777754

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.24  E-value=0.022  Score=40.83  Aligned_cols=62  Identities=24%  Similarity=0.332  Sum_probs=42.7

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |.|.||+++++.|...|++|++.+|+.++.+.+.+. .....  +   .++++.+       ...-|+|+.+...
T Consensus       164 G~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~-g~~~~--~---~~~l~~~-------l~~aDvVi~~~p~  225 (300)
T 2rir_A          164 GLGRTGMTIARTFAALGANVKVGARSSAHLARITEM-GLVPF--H---TDELKEH-------VKDIDICINTIPS  225 (300)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TCEEE--E---GGGHHHH-------STTCSEEEECCSS
T ss_pred             cccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC-CCeEE--c---hhhHHHH-------hhCCCEEEECCCh
Confidence            468999999999999999999999998766544331 22222  1   1222222       3467999998874

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=95.22  E-value=0.068  Score=37.02  Aligned_cols=29  Identities=24%  Similarity=0.344  Sum_probs=26.9

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKAT   30 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~   30 (162)
                      |.|.+|.+++..|++.|++|++.+|+++.
T Consensus        26 G~G~mG~alA~~L~~~G~~V~~~~r~~~~   54 (245)
T 3dtt_A           26 GTGTVGRTMAGALADLGHEVTIGTRDPKA   54 (245)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            57899999999999999999999999886

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=95.21  E-value=0.09  Score=36.69  Aligned_cols=26  Identities=23%  Similarity=0.373  Sum_probs=23.3

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRS   27 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~   27 (162)
                      |.||+|.++++.|+..|. ++.++|++
T Consensus        35 G~GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           35 GLGGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             CCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             ccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            578999999999999998 88898775

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=95.19  E-value=0.11  Score=36.88  Aligned_cols=35  Identities=17%  Similarity=0.374  Sum_probs=30.1

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ   36 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~   36 (162)
                      |.|.+|..++..|.+.|++|++.+|+++..+.+.+
T Consensus        12 G~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~   46 (299)
T 1vpd_A           12 GLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA   46 (299)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH
Confidence            47899999999999999999999999887666543

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=95.19  E-value=0.0054  Score=44.82  Aligned_cols=35  Identities=23%  Similarity=0.291  Sum_probs=30.5

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ   36 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~   36 (162)
                      |.|.+|..++..|++.|++|.+++|+++..+.+.+
T Consensus        11 G~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~   45 (359)
T 1bg6_A           11 GLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   45 (359)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHh
Confidence            46899999999999999999999999887776644

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=95.19  E-value=0.14  Score=36.27  Aligned_cols=35  Identities=20%  Similarity=0.244  Sum_probs=30.2

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ   36 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~   36 (162)
                      |.|.+|..++..|.+.|++|++.+|+++..+.+.+
T Consensus        11 G~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~   45 (301)
T 3cky_A           11 GLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVA   45 (301)
T ss_dssp             CCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHT
T ss_pred             CccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence            47899999999999999999999999887766543

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=95.09  E-value=0.035  Score=40.70  Aligned_cols=74  Identities=11%  Similarity=0.095  Sum_probs=42.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhh----HHhhhcCCceeEEEeccCCh--HHHHHHHHHHHH-HcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKAT----MADLEQDPRFFVQELDVLSE--QSVQNVLSNVLE-KFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~----~~~~~~~~~~~~~~~D~~~~--~~i~~~~~~~~~-~~~~id~vi~~   73 (162)
                      ||+|++|...+..+...|++|+.+.++.+.    .+.+.+-..-.++  |..+.  +++...+.++.. ..+.+|++|.+
T Consensus       175 Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi--~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~  252 (364)
T 1gu7_A          175 GGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVI--TEDQNNSREFGPTIKEWIKQSGGEAKLALNC  252 (364)
T ss_dssp             CTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEE--EHHHHHCGGGHHHHHHHHHHHTCCEEEEEES
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEE--ecCccchHHHHHHHHHHhhccCCCceEEEEC
Confidence            678999999888777789999888765543    2323221211222  22210  122222332220 12479999999


Q ss_pred             CCC
Q 042185           74 AGV   76 (162)
Q Consensus        74 ag~   76 (162)
                      +|.
T Consensus       253 ~G~  255 (364)
T 1gu7_A          253 VGG  255 (364)
T ss_dssp             SCH
T ss_pred             CCc
Confidence            983

>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*

Probab=95.08  E-value=0.24  Score=37.49  Aligned_cols=35  Identities=23%  Similarity=0.315  Sum_probs=31.2

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ   36 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~   36 (162)
                      |.|.+|..+|..|++.|++|+..++++++.+.+.+
T Consensus        18 GlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~   52 (431)
T 3ojo_A           18 GLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQN   52 (431)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred             eeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHC
Confidence            57899999999999999999999999988776644

>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6

Probab=95.03  E-value=0.14  Score=39.26  Aligned_cols=34  Identities=21%  Similarity=0.275  Sum_probs=29.5

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLE   35 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~   35 (162)
                      |.|.+|..++..|+++|++|.+.+|+.++.+++.
T Consensus         8 G~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~   41 (478)
T 1pgj_A            8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFM   41 (478)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            5789999999999999999999999987766543

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=94.98  E-value=0.021  Score=41.91  Aligned_cols=105  Identities=13%  Similarity=0.137  Sum_probs=56.0

Q ss_pred             CCCCchHHHHHHHHHHCCC--eEEEEecChhhHHh----hhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDC--RVVATGRSKATMAD----LEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~--~vi~~~r~~~~~~~----~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      |++|.+|..++..++.+|.  +|+++|.+.++++.    +.... +  ...++.-..+..       +.+..-|++|.++
T Consensus        15 GaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~-~--~~~~i~~t~d~~-------~al~dADvVvita   84 (343)
T 3fi9_A           15 GAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG-F--EGLNLTFTSDIK-------EALTDAKYIVSSG   84 (343)
T ss_dssp             TTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC-C--TTCCCEEESCHH-------HHHTTEEEEEECC
T ss_pred             CCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc-C--CCCceEEcCCHH-------HHhCCCCEEEEcc
Confidence            6679999999999999984  79999998775543    21111 0  001111011122       1223569999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhh-cCCCe-EEEecc
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY-RKKGK-IINVGS  125 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~-iv~isS  125 (162)
                      |.... +  .++.   ...+..|+.-.    +.+.+.+.+ ..++. ++++|-
T Consensus        85 G~p~k-p--G~~R---~dLl~~N~~I~----~~i~~~i~~~~p~a~~vlvvsN  127 (343)
T 3fi9_A           85 GAPRK-E--GMTR---EDLLKGNAEIA----AQLGKDIKSYCPDCKHVIIIFN  127 (343)
T ss_dssp             C----------CH---HHHHHHHHHHH----HHHHHHHHHHCTTCCEEEECSS
T ss_pred             CCCCC-C--CCCH---HHHHHHHHHHH----HHHHHHHHHhccCcEEEEEecC
Confidence            96321 1  2232   23455565544    444444443 34564 666664

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=94.95  E-value=0.29  Score=34.85  Aligned_cols=32  Identities=25%  Similarity=0.361  Sum_probs=28.0

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMAD   33 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~   33 (162)
                      |.|.+|..++..|++.|++|++.+++++.++.
T Consensus        22 G~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~   53 (302)
T 1f0y_A           22 GGGLMGAGIAQVAAATGHTVVLVDQTEDILAK   53 (302)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEECCHHHHHH
Confidence            46889999999999999999999999776553

>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*

Probab=94.94  E-value=0.21  Score=38.28  Aligned_cols=73  Identities=16%  Similarity=0.194  Sum_probs=48.9

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-C---C----------------ceeEEEeccCChHHHHHHHHHHH
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-D---P----------------RFFVQELDVLSEQSVQNVLSNVL   61 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-~---~----------------~~~~~~~D~~~~~~i~~~~~~~~   61 (162)
                      |.|.+|..++..|+++|++|.+.+|++++.+++.. +   .                ...++-+=+.....++.+++++.
T Consensus         9 G~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~vl~~l~   88 (482)
T 2pgd_A            9 GLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDNFIEKLV   88 (482)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHHHHHHHH
Confidence            56889999999999999999999999887665543 1   0                12233333334446777777776


Q ss_pred             HHcCCccEEEECC
Q 042185           62 EKFGKIDVLVNNA   74 (162)
Q Consensus        62 ~~~~~id~vi~~a   74 (162)
                      ....+=++||...
T Consensus        89 ~~l~~g~iII~~s  101 (482)
T 2pgd_A           89 PLLDIGDIIIDGG  101 (482)
T ss_dssp             HHCCTTCEEEECS
T ss_pred             hhcCCCCEEEECC
Confidence            5554445666543

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=94.93  E-value=0.24  Score=37.99  Aligned_cols=33  Identities=18%  Similarity=0.264  Sum_probs=29.1

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADL   34 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~   34 (162)
                      |.|-+|..+|..|++.|++|++.+++++.+++.
T Consensus        12 GaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~   44 (483)
T 3mog_A           12 GSGTMGAGIAEVAASHGHQVLLYDISAEALTRA   44 (483)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHH
T ss_pred             CcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHH
Confidence            468899999999999999999999998876653

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=94.92  E-value=0.11  Score=36.85  Aligned_cols=35  Identities=9%  Similarity=0.255  Sum_probs=30.3

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ   36 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~   36 (162)
                      |.|.+|..++..|.+.|++|++.+|++++.+.+.+
T Consensus         7 G~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~   41 (296)
T 2gf2_A            7 GLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQD   41 (296)
T ss_dssp             CCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHT
T ss_pred             eccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            57899999999999999999999999887766543

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=94.90  E-value=0.15  Score=37.26  Aligned_cols=27  Identities=19%  Similarity=0.327  Sum_probs=24.3

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecCh
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSK   28 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~   28 (162)
                      |.||+|.++++.|+..|. ++.++|++.
T Consensus        41 GaGGlGs~va~~La~aGVg~ItlvD~D~   68 (340)
T 3rui_A           41 GAGTLGCYVSRALIAWGVRKITFVDNGT   68 (340)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence            578999999999999998 899998864

>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*

Probab=94.90  E-value=0.094  Score=40.19  Aligned_cols=74  Identities=14%  Similarity=0.161  Sum_probs=48.3

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCC---c----------------eeEEEeccCChHHHHHHHHHHHH
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDP---R----------------FFVQELDVLSEQSVQNVLSNVLE   62 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~---~----------------~~~~~~D~~~~~~i~~~~~~~~~   62 (162)
                      |.|.+|.+++..|+++|++|++.+|++++.+++.++.   .                ..++-+=+.....++.+++++..
T Consensus        22 GlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl~~l~~  101 (480)
T 2zyd_A           22 GMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTDAAIDSLKP  101 (480)
T ss_dssp             CCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSHHHHHHHHHGG
T ss_pred             ccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHHHHHHHHHHHh
Confidence            5788999999999999999999999988766543210   1                22333333333457777777655


Q ss_pred             HcCCccEEEECCC
Q 042185           63 KFGKIDVLVNNAG   75 (162)
Q Consensus        63 ~~~~id~vi~~ag   75 (162)
                      ...+=++||.+..
T Consensus       102 ~l~~g~iIId~s~  114 (480)
T 2zyd_A          102 YLDKGDIIIDGGN  114 (480)
T ss_dssp             GCCTTCEEEECSC
T ss_pred             hcCCCCEEEECCC
Confidence            4433455665543

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=94.80  E-value=0.22  Score=38.34  Aligned_cols=59  Identities=22%  Similarity=0.340  Sum_probs=41.6

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |.|.||+.+++.+...|++|+++++++++.+.+.... ..+     .+.+   .+       ....|++|.+.|.
T Consensus       281 G~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~G-a~~-----~~l~---e~-------l~~aDvVi~atgt  339 (494)
T 3ce6_A          281 GYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEG-FDV-----VTVE---EA-------IGDADIVVTATGN  339 (494)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-CEE-----CCHH---HH-------GGGCSEEEECSSS
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC-CEE-----ecHH---HH-------HhCCCEEEECCCC
Confidence            4689999999999999999999999988766554322 221     1222   11       1357999888764

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=94.76  E-value=0.17  Score=36.72  Aligned_cols=71  Identities=17%  Similarity=0.124  Sum_probs=45.4

Q ss_pred             CCCchHHHHHHHHHHCCCe-EEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            2 SQGGIGHALARAFAASDCR-VVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |.|++|...+..+...|+. ++.+++++++++.+++-.....+  |.++.+ .......+. .....|.++.++|.
T Consensus       168 GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i--~~~~~~-~~~~~~~~~-~~~g~d~v~d~~G~  239 (346)
T 4a2c_A          168 GAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTF--NSSEMS-APQMQSVLR-ELRFNQLILETAGV  239 (346)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEE--ETTTSC-HHHHHHHHG-GGCSSEEEEECSCS
T ss_pred             CCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEE--eCCCCC-HHHHHHhhc-ccCCcccccccccc
Confidence            3589999998888889985 57888888887766654433443  333322 223333332 23467888888874

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=94.71  E-value=0.24  Score=37.58  Aligned_cols=34  Identities=18%  Similarity=0.257  Sum_probs=29.7

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLE   35 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~   35 (162)
                      |.|.+|..+|..|++.|++|++.++++++.+.+.
T Consensus        15 GlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~   48 (446)
T 4a7p_A           15 GTGYVGLVSGACFSDFGHEVVCVDKDARKIELLH   48 (446)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHT
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHh
Confidence            5788999999999999999999999987766543

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=94.66  E-value=0.25  Score=37.55  Aligned_cols=34  Identities=21%  Similarity=0.299  Sum_probs=29.7

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLE   35 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~   35 (162)
                      |.|.+|..++..|++.|++|++.++++++.+.+.
T Consensus         9 G~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~   42 (450)
T 3gg2_A            9 GIGYVGLVSATCFAELGANVRCIDTDRNKIEQLN   42 (450)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHH
Confidence            5789999999999999999999999987766543

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=94.65  E-value=0.062  Score=39.52  Aligned_cols=69  Identities=12%  Similarity=0.184  Sum_probs=44.5

Q ss_pred             CCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            3 QGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      +|++|...+..+...|+ +|+.+++++++++.+.+-..-.+  +|..+.+ +...+.+.  ..+.+|++|.++|.
T Consensus       199 aG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v--i~~~~~~-~~~~~~~~--~~gg~D~vid~~g~  268 (371)
T 1f8f_A          199 AGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHV--INSKTQD-PVAAIKEI--TDGGVNFALESTGS  268 (371)
T ss_dssp             CSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEE--EETTTSC-HHHHHHHH--TTSCEEEEEECSCC
T ss_pred             CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEE--ecCCccC-HHHHHHHh--cCCCCcEEEECCCC
Confidence            58999999888777899 69999999888776654222222  2443332 22222222  12379999999984

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=94.64  E-value=0.12  Score=37.61  Aligned_cols=68  Identities=18%  Similarity=0.172  Sum_probs=44.9

Q ss_pred             CCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHc-C-CccEEEECCCC
Q 042185            3 QGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF-G-KIDVLVNNAGV   76 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~-~id~vi~~ag~   76 (162)
                      +|++|...+..+...|+ +|+.+++++++++.+.+-..-.+  +|..+.+-.    +++.+.. + .+|++|.++|.
T Consensus       175 aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v--i~~~~~~~~----~~v~~~t~g~g~D~v~d~~g~  245 (352)
T 3fpc_A          175 IGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDI--INYKNGDIV----EQILKATDGKGVDKVVIAGGD  245 (352)
T ss_dssp             CSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEE--ECGGGSCHH----HHHHHHTTTCCEEEEEECSSC
T ss_pred             CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceE--EcCCCcCHH----HHHHHHcCCCCCCEEEECCCC
Confidence            58999998888888899 89999999887766654222222  344333222    2233322 2 59999999885

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=94.62  E-value=0.3  Score=36.88  Aligned_cols=32  Identities=19%  Similarity=0.167  Sum_probs=27.5

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMAD   33 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~   33 (162)
                      |.|.||+.+++.|...|++|+++++++.+..+
T Consensus       227 G~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~  258 (435)
T 3gvp_A          227 GYGEVGKGCCAALKAMGSIVYVTEIDPICALQ  258 (435)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             eeCHHHHHHHHHHHHCCCEEEEEeCChhhhHH
Confidence            56789999999999999999999998765443

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=94.59  E-value=0.22  Score=37.52  Aligned_cols=35  Identities=20%  Similarity=0.268  Sum_probs=30.8

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ   36 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~   36 (162)
                      |.|.+|..++..|++.|++|+++++++++.+.+..
T Consensus         7 G~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~   41 (436)
T 1mv8_A            7 GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQ   41 (436)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhC
Confidence            57899999999999999999999999887776544

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=94.57  E-value=0.35  Score=37.04  Aligned_cols=35  Identities=17%  Similarity=0.237  Sum_probs=30.6

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ   36 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~   36 (162)
                      |.|.+|..++..|++.|++|+++++++++.+.+.+
T Consensus        15 G~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~   49 (478)
T 2y0c_A           15 GSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNN   49 (478)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred             CcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHC
Confidence            57899999999999999999999999887766543

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=94.50  E-value=0.059  Score=38.79  Aligned_cols=66  Identities=17%  Similarity=0.195  Sum_probs=42.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|++|...+..+...|++|+.++++. +.+.+.+-..-.+  +|..+.+.+.       +....+|++|.+.|.
T Consensus       160 Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~~~~~~~lGa~~~--i~~~~~~~~~-------~~~~g~D~v~d~~g~  225 (321)
T 3tqh_A          160 AGAGGVGHLAIQLAKQKGTTVITTASKR-NHAFLKALGAEQC--INYHEEDFLL-------AISTPVDAVIDLVGG  225 (321)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEECHH-HHHHHHHHTCSEE--EETTTSCHHH-------HCCSCEEEEEESSCH
T ss_pred             cCCcHHHHHHHHHHHHcCCEEEEEeccc-hHHHHHHcCCCEE--EeCCCcchhh-------hhccCCCEEEECCCc
Confidence            6899999999999989999999887544 3444433121122  3444433222       122578999999884

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=94.49  E-value=0.047  Score=37.07  Aligned_cols=35  Identities=26%  Similarity=0.334  Sum_probs=30.7

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ   36 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~   36 (162)
                      |+|.+|.+++..|.+.|++|++.+|+.++.+++.+
T Consensus        35 G~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~   69 (215)
T 2vns_A           35 GSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFP   69 (215)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSB
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            47899999999999999999999999887776654

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=94.49  E-value=0.18  Score=39.70  Aligned_cols=27  Identities=19%  Similarity=0.327  Sum_probs=24.4

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecCh
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSK   28 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~   28 (162)
                      |.||+|.++++.|+..|. ++.++|.+.
T Consensus       333 GaGGLGs~vA~~La~aGVG~ItLvD~D~  360 (615)
T 4gsl_A          333 GAGTLGCYVSRALIAWGVRKITFVDNGT  360 (615)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence            678999999999999998 899999864

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=94.38  E-value=0.49  Score=34.47  Aligned_cols=106  Identities=15%  Similarity=0.129  Sum_probs=58.3

Q ss_pred             CCCCchHHHHHHHHHHCCC--e-----EEEEecChh--hHH----hhhcC-CceeEEEeccCChHHHHHHHHHHHHHcCC
Q 042185            1 CSQGGIGHALARAFAASDC--R-----VVATGRSKA--TMA----DLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGK   66 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~--~-----vi~~~r~~~--~~~----~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   66 (162)
                      ||+|.+|.+++..|+..|.  +     ++++|.++.  ..+    ++... ... ......++  +.       .+.+..
T Consensus        10 GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~-~~~~~~~~--~~-------~~~~~d   79 (333)
T 5mdh_A           10 GAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPL-LKDVIATD--KE-------EIAFKD   79 (333)
T ss_dssp             STTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTT-EEEEEEES--CH-------HHHTTT
T ss_pred             CCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcc-cCCEEEcC--Cc-------HHHhCC
Confidence            7899999999999998875  5     999999742  222    12221 111 11222221  11       222346


Q ss_pred             ccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CC-eEEEeccc
Q 042185           67 IDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KG-KIINVGSV  126 (162)
Q Consensus        67 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~-~iv~isS~  126 (162)
                      -|++|+++|.... +  .++.   ...++.|+.....+...    +.+.. ++ .++++|-.
T Consensus        80 aDvVvitAg~prk-p--G~tR---~dll~~N~~i~~~i~~~----i~~~~~~~~~vivvsNP  131 (333)
T 5mdh_A           80 LDVAILVGSMPRR-D--GMER---KDLLKANVKIFKCQGAA----LDKYAKKSVKVIVVGNP  131 (333)
T ss_dssp             CSEEEECCSCCCC-T--TCCT---TTTHHHHHHHHHHHHHH----HHHHSCTTCEEEECSSS
T ss_pred             CCEEEEeCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHH----HHHhCCCCeEEEEcCCc
Confidence            7999999986422 1  2222   23445566554444444    44333 45 47777753

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=94.31  E-value=0.032  Score=40.09  Aligned_cols=60  Identities=10%  Similarity=0.033  Sum_probs=39.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+ |++|...+..+...|++|+.++ +.++.+.+++-..-.++  |  |.+.+          ...+|++|.+.|.
T Consensus       150 Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~--~--d~~~v----------~~g~Dvv~d~~g~  209 (315)
T 3goh_A          150 GF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVRHLY--R--EPSQV----------TQKYFAIFDAVNS  209 (315)
T ss_dssp             CC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEE--S--SGGGC----------CSCEEEEECC---
T ss_pred             CC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEE--c--CHHHh----------CCCccEEEECCCc
Confidence            66 9999998888888899999999 77766665542322233  2  22211          3578999998875

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=94.27  E-value=0.14  Score=37.57  Aligned_cols=27  Identities=22%  Similarity=0.442  Sum_probs=24.2

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecCh
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSK   28 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~   28 (162)
                      |.||+|.++++.|+..|. ++.++|++.
T Consensus       125 G~GglGs~va~~La~aGvg~i~lvD~D~  152 (353)
T 3h5n_A          125 GCGGIGNHVSVILATSGIGEIILIDNDQ  152 (353)
T ss_dssp             CCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred             CCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence            578999999999999998 899999863

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=94.22  E-value=0.37  Score=34.98  Aligned_cols=101  Identities=16%  Similarity=0.100  Sum_probs=52.7

Q ss_pred             CCchHHHHHHHHHHCCC--eEEEEecChhhHHhh----hcCC----ceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            3 QGGIGHALARAFAASDC--RVVATGRSKATMADL----EQDP----RFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~--~vi~~~r~~~~~~~~----~~~~----~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      .|.+|.+++..|+..|.  +|++.|+++++++..    ....    .+.... |  +.           +.+..-|++|.
T Consensus        17 aG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~-~--~~-----------~a~~~aDiVvi   82 (326)
T 3vku_A           17 DGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYS-A--EY-----------SDAKDADLVVI   82 (326)
T ss_dssp             CSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CG-----------GGGTTCSEEEE
T ss_pred             CCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEE-C--cH-----------HHhcCCCEEEE
Confidence            58999999999999886  899999988765522    2111    112211 1  11           22346799999


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccc
Q 042185           73 NAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSV  126 (162)
Q Consensus        73 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~  126 (162)
                      ++|.... +  .++   -...++.|..-...+.+.+.+   ..+++.++++|-.
T Consensus        83 ~ag~~~k-p--G~t---R~dL~~~N~~I~~~i~~~i~~---~~p~a~ilvvtNP  127 (326)
T 3vku_A           83 TAGAPQK-P--GET---RLDLVNKNLKILKSIVDPIVD---SGFNGIFLVAANP  127 (326)
T ss_dssp             CCCCC----------------------CHHHHHHHHHT---TTCCSEEEECSSS
T ss_pred             CCCCCCC-C--Cch---HHHHHHHHHHHHHHHHHHHHh---cCCceEEEEccCc
Confidence            9996321 1  122   223455555544444444322   2346777777643

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=94.21  E-value=0.13  Score=37.31  Aligned_cols=69  Identities=16%  Similarity=0.187  Sum_probs=43.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCc---eeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPR---FFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~---~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |++.-+|+.+++.|...|++|.+++|+..+..+...+..   .....+..+++++++..+.+.       |+||.+.|.
T Consensus       184 G~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~A-------DIVIsAtg~  255 (320)
T 1edz_A          184 NRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDS-------DVVITGVPS  255 (320)
T ss_dssp             CCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHC-------SEEEECCCC
T ss_pred             CCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccC-------CEEEECCCC
Confidence            333346999999999999999999998543332222111   111111223445666665554       999999986

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=94.20  E-value=0.24  Score=34.81  Aligned_cols=60  Identities=13%  Similarity=0.108  Sum_probs=40.1

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC-----------CceeEEEeccCChHHHHHHHHHHHH
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD-----------PRFFVQELDVLSEQSVQNVLSNVLE   62 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~-----------~~~~~~~~D~~~~~~i~~~~~~~~~   62 (162)
                      |.|.+|..++..|.+ |++|++.+|++++.+.+.+.           ....++-.=+.+...++.+++++..
T Consensus         8 G~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~D~vi~~v~~~~~~~~v~~~l~~   78 (289)
T 2cvz_A            8 GLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYP   78 (289)
T ss_dssp             CCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTT
T ss_pred             cccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccCHHHHHhCCCEEEEeCCChHHHHHHHHHHHh
Confidence            578999999999999 99999999998766554321           1123333333444456777766644

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=94.19  E-value=0.041  Score=42.91  Aligned_cols=49  Identities=18%  Similarity=0.213  Sum_probs=39.7

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHH
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQN   55 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~   55 (162)
                      |.|-+|..+++.|.++|..|++++++++..++..     .++.+|.+|++.+++
T Consensus       355 G~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~-----~~i~gD~t~~~~L~~  403 (565)
T 4gx0_A          355 GHGRIGCAAAAFLDRKPVPFILIDRQESPVCNDH-----VVVYGDATVGQTLRQ  403 (565)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSS-----CEEESCSSSSTHHHH
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECChHHHhhcC-----CEEEeCCCCHHHHHh
Confidence            4578999999999999999999999988765542     677788877765544

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=94.19  E-value=0.095  Score=35.52  Aligned_cols=63  Identities=14%  Similarity=0.154  Sum_probs=42.9

Q ss_pred             CCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            3 QGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      +|.++..+++.+   +.+|+.++.+++.++.+..     ..++.++..|....+.+.         -+++|.|+.|..+.
T Consensus        67 ~G~~~~~la~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~---------~~~fD~I~~npp~~  134 (230)
T 3evz_A           67 TAMMALMAEKFF---NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVV---------EGTFDVIFSAPPYY  134 (230)
T ss_dssp             TCHHHHHHHHHH---CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTC---------CSCEEEEEECCCCC
T ss_pred             HHHHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcc---------cCceeEEEECCCCc
Confidence            555666666555   7899999999887665543     236888998975433211         15899999887654

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=94.08  E-value=0.17  Score=36.23  Aligned_cols=34  Identities=12%  Similarity=0.108  Sum_probs=29.6

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLE   35 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~   35 (162)
                      |.|.+|..++..|++.|++|++.+|+++..+.+.
T Consensus        37 G~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~   70 (316)
T 2uyy_A           37 GLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFI   70 (316)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHH
T ss_pred             cccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence            4689999999999999999999999988766554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	162
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	1e-42
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	5e-38
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	8e-38
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	1e-36
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	6e-36
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	1e-34
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	3e-34
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	3e-34
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	4e-34
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	8e-34
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	2e-33
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	2e-33
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	1e-32
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	1e-32
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	3e-32
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	6e-32
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	4e-31
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	6e-31
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	7e-31
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	8e-30
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	1e-29
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	1e-29
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	3e-29
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	5e-29
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	1e-28
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	1e-28
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	8e-28
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	9e-28
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	1e-27
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	2e-27
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-27
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	4e-27
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	4e-27
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	6e-27
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	2e-26
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	4e-26
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	1e-25
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	2e-25
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	1e-24
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	1e-24
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	2e-24
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	9e-24
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	3e-23
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	5e-23
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	8e-23
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	1e-22
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	2e-22
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	6e-22
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	7e-22
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	1e-21
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	8e-21
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	2e-20
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-20
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-19
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-19
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	8e-19
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	3e-17
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	6e-16
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	5e-15
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	3e-14
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	4e-13
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-09
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	1e-08
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	2e-08
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	1e-05
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	2e-05
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	0.002
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	0.004

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  139 bits (353), Expect = 1e-42
 Identities = 47/158 (29%), Positives = 62/158 (39%), Gaps = 1/158 (0%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
            GIG A+A+AFA     V             E     F Q +D+  E+     +      
Sbjct: 15  RGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQ-VDLEDERERVRFVEEAAYA 73

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
            G++DVLVNNA +   G    V L    +    N+  PM L       M     G I+NV
Sbjct: 74  LGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNV 133

Query: 124 GSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            SV           Y ASK  L +LT +L L+L    I
Sbjct: 134 ASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRI 171

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  128 bits (323), Expect = 5e-38
 Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 11/168 (6%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD-------PRFFVQELDVLSEQSVQNV 56
           GGIG A+ARA      +VV   R+   + +L  +               D+ +E+ + ++
Sbjct: 20  GGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSM 79

Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
            S +  +   +D+ +NNAG+     L     S  +  FN NV       +     M  R 
Sbjct: 80  FSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERN 139

Query: 117 --KGKIINVGSVT--VAAPGPWAGTYTASKAALHSLTDTLRLELGHFG 160
              G IIN+ S++     P      Y+A+K A+ +LT+ LR EL    
Sbjct: 140 VDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQ 187

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  127 bits (321), Expect = 8e-38
 Identities = 49/161 (30%), Positives = 69/161 (42%), Gaps = 3/161 (1%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADL---EQDPRFFVQELDVLSEQSVQNVLSNV 60
            GIG A+A  FA     +       A  A+        R    + DV     V+     V
Sbjct: 15  NGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQV 74

Query: 61  LEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
           +  FG+ D+LVNNAG+  + P  E+     ++TF  NV     + +A VP M     G+I
Sbjct: 75  ISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRI 134

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           IN+ S T          Y ++KAA    T  L  +LG  GI
Sbjct: 135 INLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGI 175

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (313), Expect = 1e-36
 Identities = 41/164 (25%), Positives = 62/164 (37%), Gaps = 5/164 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVLS 58
            GIG   A  FA    ++V    +K  + +          +     +D  + + + +   
Sbjct: 17  HGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAK 76

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
            V  + G + +LVNNAGV     L       +E+TF  NV       +A +P M     G
Sbjct: 77  KVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHG 136

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
            I+ V S       P+   Y +SK A      TL  EL    I 
Sbjct: 137 HIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQIT 180

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  123 bits (309), Expect = 6e-36
 Identities = 45/170 (26%), Positives = 68/170 (40%), Gaps = 12/170 (7%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD--------PRFFVQELDVLSEQSVQN 55
            GIG A A  FA    +V  TGR    + +  Q                 DV ++     
Sbjct: 15  NGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDE 74

Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGP----LAEVPLSAMEQTFNTNVFGPMRLVQAVVPH 111
           +LS  L KFGK+D+LVNNAG               + + + T N N+   + L +  VPH
Sbjct: 75  ILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPH 134

Query: 112 MAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           ++  K   +      +     P    Y+ +KAA+   T    ++L   GI
Sbjct: 135 LSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGI 184

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  119 bits (300), Expect = 1e-34
 Identities = 45/160 (28%), Positives = 67/160 (41%), Gaps = 2/160 (1%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVL 61
            G+G   AR   A+  RVV         A   ++       Q LDV  E+  Q V++   
Sbjct: 15  RGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAR 74

Query: 62  EKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
           E+FG +D LVNNAG+     L    +    +    N+ G    ++ V+P M     G I+
Sbjct: 75  EEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIV 134

Query: 122 NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           N+ S           +Y ASK  +  L+    +ELG   I
Sbjct: 135 NISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRI 174

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  118 bits (297), Expect = 3e-34
 Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 6/160 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLE 62
            GIG    +A  AS  +VVA  R+ + +  L ++ P      +D+    + +  L     
Sbjct: 15  KGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKAL----G 70

Query: 63  KFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKII 121
             G +D+LVNNA +  + P  EV   A +++F+ N+    ++ Q V   M  R   G I+
Sbjct: 71  GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIV 130

Query: 122 NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           NV S+      P   TY+++K A+  LT  + +ELG   I
Sbjct: 131 NVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKI 170

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  118 bits (297), Expect = 3e-34
 Identities = 38/165 (23%), Positives = 65/165 (39%), Gaps = 7/165 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRS----KATMADLEQDPRFFVQELDVLSEQSVQNVLSN 59
            GIG A+A  F     +V+ TGR     +     +    +    + D   E     +   
Sbjct: 16  LGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDA 75

Query: 60  VLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG- 118
             + FG +  LVNNAG+     + E   +   +    N+ G     +  +  M  +  G 
Sbjct: 76  TEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGA 135

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE--LGHFGI 161
            IIN+ S+      P  G Y ASK A+  ++ +  L+  L  + +
Sbjct: 136 SIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDV 180

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  119 bits (299), Expect = 4e-34
 Identities = 41/169 (24%), Positives = 67/169 (39%), Gaps = 11/169 (6%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADL-----------EQDPRFFVQELDVLSEQS 52
           GG+G A A AFA     VV                       E   R      +  S ++
Sbjct: 17  GGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEA 76

Query: 53  VQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM 112
            + ++   L+ FG+IDV+VNNAG+      + +     +     ++ G  ++ +A   HM
Sbjct: 77  GEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHM 136

Query: 113 AYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             +  G+II   S +          Y+A+K  L  L +TL +E     I
Sbjct: 137 KKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNI 185

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (294), Expect = 8e-34
 Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 3/160 (1%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLE 62
            GIG  + RAF  S  RVV   + ++    LEQ+ P       DV  E  V+ ++S  + 
Sbjct: 16  RGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIR 75

Query: 63  KFGKIDVLVNNAGVQ-CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
           +FG++D +VNNAG         E       Q    N+ G   L +  +P++  + +G +I
Sbjct: 76  RFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLR-KSQGNVI 134

Query: 122 NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           N+ S+  A     A  Y A+K A+ ++T  L L+   +G+
Sbjct: 135 NISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGV 174

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  116 bits (291), Expect = 2e-33
 Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 3/159 (1%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVL 61
            G+G  + +       +V  +  ++A    L  +   R      DV SE     V++ V 
Sbjct: 16  SGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQ 75

Query: 62  EKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
            + G ++VLVNNAG+   G +    L    +    N        Q  +  M     G II
Sbjct: 76  RRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMK-ETGGSII 134

Query: 122 NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG 160
           N+ SV+   P      Y+ASKAA+ +LT    L     G
Sbjct: 135 NMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQG 173

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  116 bits (292), Expect = 2e-33
 Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 12/170 (7%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQ--------DPRFFVQELDVLSEQSVQN 55
            GIG   A  FA     V  TGRS   + +  Q        + +      DV +E     
Sbjct: 15  NGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQ 74

Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLA----EVPLSAMEQTFNTNVFGPMRLVQAVVPH 111
           ++++ L++FGKIDVLVNNAG            +  +    +T   N+   + + + V PH
Sbjct: 75  IINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPH 134

Query: 112 MAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +   K   +     V      P    Y  +KAAL   T +  ++L  FGI
Sbjct: 135 LVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGI 184

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  114 bits (286), Expect = 1e-32
 Identities = 37/164 (22%), Positives = 66/164 (40%), Gaps = 6/164 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADL-----EQDPRFFVQELDVLSEQSVQNVLS 58
            GIG+ +    A+    V    R++  + D       +  +      D+ S    Q +++
Sbjct: 18  RGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMN 77

Query: 59  NVLEKF-GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
            V   F GK+++LVNNAG+       +  +       + N      L     P +   ++
Sbjct: 78  TVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASER 137

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G ++ + SV+ A   P+   Y A+K A+  LT  L  E     I
Sbjct: 138 GNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNI 181

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  114 bits (287), Expect = 1e-32
 Identities = 46/163 (28%), Positives = 69/163 (42%), Gaps = 8/163 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVL 61
            G+G AL   F A   +V    +S   +A+LE D          DV S +  +   S  +
Sbjct: 15  SGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCV 74

Query: 62  EKFGKIDVLVNNAGVQCVGPLAEVPLS-----AMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
            +FGKID L+ NAG+                 A ++ F+ NV G +  V+A +P +    
Sbjct: 75  ARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALV-AS 133

Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHF 159
           +G +I   S     P      YTA+K A+  L   L  EL  +
Sbjct: 134 RGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPY 176

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (282), Expect = 3e-32
 Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 6/160 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLE 62
            GIG    +A  A+  RVVA  R++A +  L ++ P      +D+   ++ +  L     
Sbjct: 17  KGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERAL----G 72

Query: 63  KFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIIN 122
             G +D+LVNNA V  + P  EV   A +++F  N+   +++ Q V   +  R     I 
Sbjct: 73  SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIV 132

Query: 123 VGSVTVA-APGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             S   +         Y ++K AL  LT  + LELG   I
Sbjct: 133 NVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKI 172

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  112 bits (281), Expect = 6e-32
 Identities = 44/158 (27%), Positives = 66/158 (41%), Gaps = 1/158 (0%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
            GIG A    FA    R+VA    +  + +  +        +DV    SV+   +  L  
Sbjct: 15  HGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAH 74

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
            G++D +V+ AG+       ++PL   E     N+ G   + +A    M  +  G I+  
Sbjct: 75  LGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLT 134

Query: 124 GSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            S         A  Y AS A +  LT TL LELG +GI
Sbjct: 135 ASRVYLGNLGQA-NYAASMAGVVGLTRTLALELGRWGI 171

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  110 bits (276), Expect = 4e-31
 Identities = 38/164 (23%), Positives = 62/164 (37%), Gaps = 6/164 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADL-----EQDPRFFVQELDVLSEQSVQNVLS 58
            GIGHA+   FA     +    R++  + +      ++  +      D       + ++ 
Sbjct: 18  KGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQ 77

Query: 59  NVLEKF-GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
            V   F GK+D+L+NN G     P  +          +TN+     L Q   P +     
Sbjct: 78  TVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGC 137

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G II + S+           Y+A+K AL+ L   L  E    GI
Sbjct: 138 GNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGI 181

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (274), Expect = 6e-31
 Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 5/159 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
            GIG A A AFA    +V+AT  +++ + +LE+ P    + LD     + +  +     +
Sbjct: 16  QGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLD----VTKKKQIDQFANE 71

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
             ++DVL N AG    G + +      + + N NV     +++A +P M  +K G IIN+
Sbjct: 72  VERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINM 131

Query: 124 GSVTVAAPGPWAGT-YTASKAALHSLTDTLRLELGHFGI 161
            SV  +  G      Y+ +KAA+  LT ++  +    GI
Sbjct: 132 SSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGI 170

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  110 bits (275), Expect = 7e-31
 Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 7/165 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRS----KATMADLEQDPRFFVQELDVLSEQSVQNVLSN 59
           GGIG   A+ F     +VV    +    +    ++           DV  ++ V+N++  
Sbjct: 16  GGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDT 75

Query: 60  VLEKFGKIDVLVNNAGVQCVGP--LAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
            + K GK+D++  N GV    P  + E      ++  + NV+G   + +     M   KK
Sbjct: 76  TIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKK 135

Query: 118 GKIINVGSVTVAAPG-PWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G I+   S++    G   +  YTA+K A+  LT +L  ELG +GI
Sbjct: 136 GSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGI 180

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  107 bits (267), Expect = 8e-30
 Identities = 45/172 (26%), Positives = 64/172 (37%), Gaps = 14/172 (8%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADL------EQDPRFFVQELDVLSEQSVQNVL 57
            GIG A  RA AA+   V    RS A   ++      E   +    + DV +   V   +
Sbjct: 19  RGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTI 78

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             +    G I  L+ NAGV  V P  E+        ++ NVFG     +AV      +++
Sbjct: 79  QQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQ 138

Query: 118 GKIINVGSVTVA--------APGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
              I V S   +                Y +SKAA  +L   L  E    GI
Sbjct: 139 KGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGI 190

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  106 bits (265), Expect = 1e-29
 Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 12/170 (7%)

Query: 4   GGIGHALARAFAA-------SDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQ 51
            GIG A+A  FA         +  +V + R+ A +  +  +             D+    
Sbjct: 11  KGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMA 70

Query: 52  SVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH 111
            V+ + ++++E++G ID LVNNAGV   G L+++     + T NTN+ G   L QA+   
Sbjct: 71  DVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFAL 130

Query: 112 MAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           M  +  G I  + SV        +  Y  SK     L +T+RL      +
Sbjct: 131 MERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNV 180

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  107 bits (267), Expect = 1e-29
 Identities = 43/168 (25%), Positives = 67/168 (39%), Gaps = 10/168 (5%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD--------PRFFVQELDVLSEQSVQN 55
            GIG + A  FA    +V  TGR++  + + +Q          +      DV       +
Sbjct: 14  NGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDD 73

Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEV--PLSAMEQTFNTNVFGPMRLVQAVVPHMA 113
           +++  L KFGKID+LVNNAG       A    P+   ++TF  N    + + Q    H+ 
Sbjct: 74  IINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLI 133

Query: 114 YRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             K   +     V           Y  +KAAL   T    ++L   G+
Sbjct: 134 KTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGV 181

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (264), Expect = 3e-29
 Identities = 34/165 (20%), Positives = 60/165 (36%), Gaps = 7/165 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD------PRFFVQELDVLSEQSVQNVL 57
            GIG  +A   A     VV T RSK T+  +                  +      +  +
Sbjct: 24  KGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFV 83

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
           +   +  G +D+L+ N        L    +  + ++   N    + L  A +P +  +  
Sbjct: 84  AQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLK-QSN 142

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           G I+ V S+      P    Y+ASK AL     ++R E     ++
Sbjct: 143 GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVN 187

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  105 bits (262), Expect = 5e-29
 Identities = 36/168 (21%), Positives = 61/168 (36%), Gaps = 18/168 (10%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQ------DPRFFVQELDV-LSEQSVQNV 56
           GGIG   +R     + +             L +               DV +     + +
Sbjct: 15  GGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKL 74

Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR- 115
           L  + ++   +D+L+N AG+             +E+T   N  G +    A++     R 
Sbjct: 75  LKKIFDQLKTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRK 126

Query: 116 --KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
               G I N+ SVT          Y+ASKAA+ S T++L       G+
Sbjct: 127 GGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGV 174

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  104 bits (260), Expect = 1e-28
 Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 2/159 (1%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
              G   A   + +   V     S     +LE     + Q L  +SEQ    ++  V   
Sbjct: 10  HFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQ-LKPMSEQEPAELIEAVTSA 68

Query: 64  FGKIDVLVNNAGVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIIN 122
           +G++DVLV+N        P+ +  +             P  LV AV   M  RK G II 
Sbjct: 69  YGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIF 128

Query: 123 VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           + S T   P     TYT+++A   +L + L  ELG + I
Sbjct: 129 ITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNI 167

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  104 bits (260), Expect = 1e-28
 Identities = 49/165 (29%), Positives = 70/165 (42%), Gaps = 7/165 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD------PRFFVQELDVLSEQSVQNVL 57
            G+G  +A+  A + C VV   R+    ++  Q               DV + + V+ +L
Sbjct: 15  RGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLL 74

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             V EKFGK+D +VN AG+    P  E PL    Q    N+FG   + +     +     
Sbjct: 75  EAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDN 134

Query: 118 GKIINVG-SVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             IIN+G         P    Y ASK  + SLT  L  E G +GI
Sbjct: 135 PSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGI 179

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  101 bits (253), Expect = 8e-28
 Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 2/160 (1%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVL 61
            GIG A+A   AA   +V+ T  S+     +            L+V    S+++VL  + 
Sbjct: 14  RGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIR 73

Query: 62  EKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
            +FG++D+LVNNAG+     L  +          TN+    RL +AV+  M  ++ G+II
Sbjct: 74  AEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRII 133

Query: 122 NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            +GSV           Y A+KA L   + +L  E+   GI
Sbjct: 134 TIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGI 173

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (253), Expect = 9e-28
 Identities = 39/170 (22%), Positives = 65/170 (38%), Gaps = 20/170 (11%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD-------PRFFVQELDVLSEQSVQNV 56
            GIG A A A      +V     +       +          +    + DV  +Q +++ 
Sbjct: 13  QGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDT 72

Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMA--- 113
              V++ FG++D+LVNNAGV              E+T   N+   +      + +M+   
Sbjct: 73  FRKVVDHFGRLDILVNNAGVNNEKN--------WEKTLQINLVSVISGTYLGLDYMSKQN 124

Query: 114 YRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLT--DTLRLELGHFGI 161
             + G IIN+ S+    P      Y ASK  +   T    L   L + G+
Sbjct: 125 GGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGV 174

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  101 bits (252), Expect = 1e-27
 Identities = 41/164 (25%), Positives = 66/164 (40%), Gaps = 6/164 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADL-----EQDPRFFVQELDVLSEQSVQNVLS 58
            GIG+A+    A    RV    R++  + +      E+         D+LS      ++ 
Sbjct: 16  KGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQ 75

Query: 59  NVLEKF-GKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
            V   F GK+++LVNNAGV       +           TN      L Q   P +   + 
Sbjct: 76  TVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQN 135

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G +I + S+   +  P    Y+ASK A++ +T +L  E     I
Sbjct: 136 GNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNI 179

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  101 bits (251), Expect = 2e-27
 Identities = 40/183 (21%), Positives = 69/183 (37%), Gaps = 25/183 (13%)

Query: 4   GGIGHALARAFAAS--DCRVVATGRSKATMADL--EQDPRFFVQELDVLSEQSVQNVLSN 59
            GIG  L +          ++AT R      +L   +D R  V  L V  ++S+   +S 
Sbjct: 13  RGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSK 72

Query: 60  VLEKFGK--IDVLVNNAGVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
           V E  G   + +L+NNAGV    G   E   + + +  + N    + L Q ++P +    
Sbjct: 73  VGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAA 132

Query: 117 KGKIINVGSVTV------------------AAPGPWAGTYTASKAALHSLTDTLRLELGH 158
             +  +  SV+                    +       Y  SKAA++    TL ++L  
Sbjct: 133 SKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKD 192

Query: 159 FGI 161
             +
Sbjct: 193 DNV 195

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  100 bits (250), Expect = 2e-27
 Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 6/164 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADL------EQDPRFFVQELDVLSEQSVQNVL 57
            GIG A+A +   + C+V+      A  A+           +      DV  E  V+ ++
Sbjct: 11  RGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMM 70

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
              ++ +G IDV+VNNAG+     L  +  S  ++  + N+ G     QA    M  ++K
Sbjct: 71  KTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRK 130

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G+IIN+ SV           Y A+KA +   + T   E     I
Sbjct: 131 GRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNI 174

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  100 bits (249), Expect = 4e-27
 Identities = 38/163 (23%), Positives = 68/163 (41%), Gaps = 5/163 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVLS 58
            GIG  +A+  A S   V+   R++ +   +  +             DV  ++ +  V++
Sbjct: 20  RGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVIN 79

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
            +L +   +D+LVNNAG+        +     E    TN+     + Q +   M   + G
Sbjct: 80  KILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYG 139

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           +IIN+ S+           Y++SKA +   T +L  EL    I
Sbjct: 140 RIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNI 182

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (251), Expect = 4e-27
 Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 11/168 (6%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD----------PRFFVQELDVLSEQSV 53
            GIG A+ +        VV   R    +     +           R    + ++ +E+ V
Sbjct: 22  TGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEV 81

Query: 54  QNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMA 113
            N++ + L+ FGKI+ LVNN G Q + P   +          TN+ G   + +AV     
Sbjct: 82  NNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWM 141

Query: 114 YRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
               G I+N+  V   A  P A    A++A +++LT +L LE    GI
Sbjct: 142 KEHGGSIVNI-IVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGI 188

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 99.8 bits (248), Expect = 6e-27
 Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 7/165 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADL-----EQDPRFFVQELDVLSEQSVQNVLS 58
            GIG  +AR       RV    R +  +        E       +  DV S   ++ +++
Sbjct: 12  SGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVA 71

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
            V+E++G +DVLVNNAG    G  AE+          TN+ G  R+ + V+      ++G
Sbjct: 72  AVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG 131

Query: 119 KIINV--GSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
               V   S         A  Y+ASK  +   T  L LEL   GI
Sbjct: 132 TGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 176

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 97.8 bits (243), Expect = 2e-26
 Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 2/160 (1%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVL 61
            G+G +  RA  A   +VV           +  +         LDV      +  +   +
Sbjct: 16  RGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAV 75

Query: 62  EKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
             FG + VLVNNAG+  +G + +  L+  ++  + N+ G    ++AVV  M    +G II
Sbjct: 76  TAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSII 135

Query: 122 NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           N+ S+   A       YTA+K A+  LT +  LELG  GI
Sbjct: 136 NISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGI 175

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.0 bits (243), Expect = 4e-26
 Identities = 38/165 (23%), Positives = 71/165 (43%), Gaps = 8/165 (4%)

Query: 4   GGIGHALARAFAASD-CRVVATGRS----KATMADLEQD-PRFFVQELDVLSEQSVQNVL 57
            GIG A+ R         VV T R     +A +  L+ +       +LD+   QS++ + 
Sbjct: 13  KGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALR 72

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
             + +++G +DVLVNNAG+              E T  TN FG   +   ++P +  + +
Sbjct: 73  DFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLI--KPQ 130

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID 162
           G+++NV S+               K    ++T+   + L +  ++
Sbjct: 131 GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVE 175

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 96.3 bits (239), Expect = 1e-25
 Identities = 41/166 (24%), Positives = 68/166 (40%), Gaps = 8/166 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRS-------KATMADLEQDPRFFVQELDVLSEQSVQNV 56
            G+G A A   AA   ++     S       KA + +   D        DV  E  V+  
Sbjct: 14  SGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAY 73

Query: 57  LSNVLEKFGKIDVLVNNAGVQ-CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
           ++   E+FG+ID   NNAG++    P      +  ++  + N+ G    ++ V+  M  +
Sbjct: 74  VTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ 133

Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             G ++N  SV           Y A+K  +  LT    +E G +GI
Sbjct: 134 GSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGI 179

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 96.3 bits (239), Expect = 2e-25
 Identities = 28/164 (17%), Positives = 68/164 (41%), Gaps = 7/164 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRS-----KATMADLEQD-PRFFVQELDVLSEQSVQNVL 57
            GIG  +A       C+V+    +     +  +A ++++       + +V   + +  + 
Sbjct: 28  RGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMF 87

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
              ++ FGK+D++ +N+GV   G + +V     ++ F  N  G   + +    H+    +
Sbjct: 88  EEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGR 147

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             ++   +    A  P    Y+ SK A+ +    + +++    I
Sbjct: 148 LILMGSITGQAKAV-PKHAVYSGSKGAIETFARCMAIDMADKKI 190

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 93.6 bits (232), Expect = 1e-24
 Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 6/163 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVLS 58
            GIG  +A  FA +   VV +  +      +  +      + F    D+ SEQ +  +  
Sbjct: 21  AGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALAD 80

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
             + K GK+D+LVNNAG     P  ++P++   + +  NVF    L Q V P M     G
Sbjct: 81  FAISKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGG 139

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            I+ + S+          +Y +SKAA   L   +  +LG   I
Sbjct: 140 VILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNI 182

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 93.3 bits (231), Expect = 1e-24
 Identities = 37/165 (22%), Positives = 64/165 (38%), Gaps = 9/165 (5%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADL------EQDPRFFVQELDVLSEQSVQNVL 57
            GIG  +A         VV    S +  A+       +   +    + D+     V  + 
Sbjct: 16  RGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALF 75

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
              +  FG +D +++N+G++      EV     ++ FN N  G   + Q  + H   R+ 
Sbjct: 76  DKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHC--RRG 133

Query: 118 GKIINVGSVTVAAPG-PWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G+II   S+     G P    Y  SKAA+        ++ G  G+
Sbjct: 134 GRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGV 178

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 93.4 bits (231), Expect = 2e-24
 Identities = 30/167 (17%), Positives = 60/167 (35%), Gaps = 10/167 (5%)

Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ----DPRFFVQELDVLSEQSVQNVL 57
           +Q  +G A+A     +   V  + +++    + E+         +   DV  ++ +  + 
Sbjct: 18  NQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALF 77

Query: 58  SNVLEKFGKIDVLVNNA----GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMA 113
           + V E FG +D LV+           G   +            + +  + + +   P + 
Sbjct: 78  AGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLL- 136

Query: 114 YRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG 160
            R+ G I+ +         P       +KAAL +    L  ELG  G
Sbjct: 137 -REGGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKG 182

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 90.9 bits (225), Expect = 9e-24
 Identities = 36/158 (22%), Positives = 70/158 (44%), Gaps = 10/158 (6%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
            GIG A+A   +     V    R++  +       R+ V +        ++  L  + EK
Sbjct: 14  RGIGRAVADVLSQEGAEVTICARNEELLKRSGH--RYVVCD--------LRKDLDLLFEK 63

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
             ++D+LV NAG    G   E+     ++  ++     +++V+  +P M  +  G+I+ +
Sbjct: 64  VKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAI 123

Query: 124 GSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            S +V +P     T  +++ AL     TL  E+  +GI
Sbjct: 124 TSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGI 161

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 89.4 bits (221), Expect = 3e-23
 Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 6/158 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
            GIG A+A+  AA   +V  T R       L      F  E+DV    +V    + V E 
Sbjct: 17  RGIGLAIAQRLAADGHKVAVTHRGSGAPKGL------FGVEVDVTDSDAVDRAFTAVEEH 70

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
            G ++VLV+NAG+     L  +     E+  N N+ G  R+ Q     M   K G++I +
Sbjct: 71  QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFI 130

Query: 124 GSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           GSV+          Y ASKA +  +  ++  EL    +
Sbjct: 131 GSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANV 168

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 89.4 bits (221), Expect = 5e-23
 Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 7/165 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADL------EQDPRFFVQELDVLSEQSVQNVL 57
            G+G ++A  FA    +VV   RSK   A+       +        + DV  E  V N++
Sbjct: 17  TGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLV 76

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
            + +++FGK+DV++NNAG++      E+ LS   +  +TN+ G     +  + +      
Sbjct: 77  QSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDI 136

Query: 118 -GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            G +IN+ SV    P P    Y ASK  +  +T+TL LE    GI
Sbjct: 137 KGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGI 181

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 88.7 bits (219), Expect = 8e-23
 Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 6/164 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVLS 58
           G IG A A   A     +     ++  +   E               DV SE++V   + 
Sbjct: 15  GNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVD 74

Query: 59  NVLEKFGKIDVLVNNAGVQ-CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
           +V+  FGKID L NNAG Q    P+ + P     +    NV G   +++AV   M  +  
Sbjct: 75  SVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNY 134

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G+I+N  S+      P    Y  SK A+ +LT+T  L+L  + I
Sbjct: 135 GRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNI 178

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 88.3 bits (218), Expect = 1e-22
 Identities = 45/164 (27%), Positives = 66/164 (40%), Gaps = 6/164 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVLS 58
            GIG A+A         V     + AT   +  +           ++DV     V   + 
Sbjct: 11  QGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVE 70

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH-MAYRKK 117
              +  G  DV+VNNAGV    P+  +    +++ +N NV G +  +QA V         
Sbjct: 71  QARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHG 130

Query: 118 GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           GKIIN  S       P    Y++SK A+  LT T   +L   GI
Sbjct: 131 GKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGI 174

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 87.8 bits (217), Expect = 2e-22
 Identities = 37/160 (23%), Positives = 60/160 (37%), Gaps = 5/160 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADL--EQDPRFFVQELDVLSEQSVQNVLSNVL 61
            GIG A    FA     +VA  R +  +A+     +        DV   ++V+ V +  L
Sbjct: 15  SGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEAL 74

Query: 62  EKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
           E+FG++  + + AGV        +PL A E+    N+ G   + +     +       + 
Sbjct: 75  EEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLT 134

Query: 122 NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
                           Y A K  +  L  TL LEL   G+
Sbjct: 135 ---GSVAGLGAFGLAHYAAGKLGVVGLARTLALELARKGV 171

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 86.4 bits (213), Expect = 6e-22
 Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 3/161 (1%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADL--EQDPRFFVQELDVLSEQSVQNVLSNVL 61
            GIG A A A+     RV     +         E  P      LDV  + S+   ++ +L
Sbjct: 15  RGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELL 74

Query: 62  EKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKII 121
           +++G ID+LVNNA +  + P+ E+   + ++ F  NV G + ++QAV   M    +G  I
Sbjct: 75  DRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKI 134

Query: 122 NVGSVTVA-APGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
              +           G Y A+KAA+ SLT +  L L   GI
Sbjct: 135 INMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGI 175

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 87.1 bits (215), Expect = 7e-22
 Identities = 24/165 (14%), Positives = 66/165 (40%), Gaps = 7/165 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD------PRFFVQELDVLSEQSVQNVL 57
            G+G  +    ++   + V   R    +    +        +    + DV     VQN +
Sbjct: 35  TGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTV 94

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH-MAYRK 116
           S +++  G  ++++NNA    + P   +  +A +   +  + G   +   +    +  +K
Sbjct: 95  SELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQK 154

Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
               +++ ++       +     ++KA + +++ +L  E G +G+
Sbjct: 155 GAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGM 199

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 86.0 bits (212), Expect = 1e-21
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 7/165 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADL-------EQDPRFFVQELDVLSEQSVQNV 56
            GIG  +A A AA    +V  G   A   +        +   +      D+   ++V+ +
Sbjct: 14  SGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGL 73

Query: 57  LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK 116
           + N + + G+ID+LVNNAG+Q    + + P    +     N+        A +PHM  + 
Sbjct: 74  VDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG 133

Query: 117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            G+IIN+ S            Y A+K  +   T    LE    GI
Sbjct: 134 FGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGI 178

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.2 bits (207), Expect = 8e-21
 Identities = 54/169 (31%), Positives = 77/169 (45%), Gaps = 13/169 (7%)

Query: 4   GGIGHALARAFAASDCRVV---ATGRSKATMADLEQ--------DPRFFVQELDVLSEQS 52
            GIG  LA   A+   +     AT R   T   L +               +LDV   +S
Sbjct: 12  SGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKS 71

Query: 53  VQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM 112
           V      V E    +DVLV NAG+  +GPL  +   A+    + NV G +R++QA +P M
Sbjct: 72  VAAARERVTEGR--VDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDM 129

Query: 113 AYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             R  G+++  GSV      P+   Y ASK AL  L ++L + L  FG+
Sbjct: 130 KRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV 178

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 82.2 bits (202), Expect = 2e-20
 Identities = 35/167 (20%), Positives = 57/167 (34%), Gaps = 16/167 (9%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
            G+G A A A  A   RVV             +       E DV  E+ V+  ++   E+
Sbjct: 11  SGLGRAAALALKARGYRVVVLDLR-------REGEDLIYVEGDVTREEDVRRAVARAQEE 63

Query: 64  FG---KIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH------MAY 114
                 +         + +G      L +  +    N+ G   +++            A 
Sbjct: 64  APLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAE 123

Query: 115 RKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
            ++G I+N  SV           Y ASK  + +LT     EL  +GI
Sbjct: 124 GQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGI 170

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 81.5 bits (200), Expect = 4e-20
 Identities = 30/158 (18%), Positives = 56/158 (35%), Gaps = 6/158 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
           G +G A+   F  +   V+    S    AD            +   EQS+    ++ L+ 
Sbjct: 12  GALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTE--QEQSILEQTASSLQ- 68

Query: 64  FGKIDVLVNNAGVQCVG-PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIIN 122
             ++D +   AG    G   ++  +   +     +V+       A +     +  G +  
Sbjct: 69  GSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIA--AKLATTHLKPGGLLQL 126

Query: 123 VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG 160
            G+     P P    Y  +KAA+H LT +L  +     
Sbjct: 127 TGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLP 164

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 79.9 bits (196), Expect = 2e-19
 Identities = 42/185 (22%), Positives = 65/185 (35%), Gaps = 27/185 (14%)

Query: 4   GGIGHALARAFAASDCRVVATGRS-----KATMADLEQ------DPRFFVQELDVLSEQS 52
             IGH++A        RVV   R      +  +A+L                L       
Sbjct: 11  RRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDC 70

Query: 53  VQNVLSNVLEKFGKIDVLVNNAGVQCVGPL-----------AEVPLSAMEQTFNTNVFGP 101
            ++++      FG+ DVLVNNA      PL           A+   + + + F +N   P
Sbjct: 71  CEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAP 130

Query: 102 MRLVQAVVPHMA-----YRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLEL 156
           + L++A             +   ++N+       P P    YT +K AL  LT    LEL
Sbjct: 131 LFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALEL 190

Query: 157 GHFGI 161
               I
Sbjct: 191 APRHI 195

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 79.1 bits (194), Expect = 3e-19
 Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 10/160 (6%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
           G +G    +AF A +  V +    +   A         + ++     +    V + V + 
Sbjct: 12  GALGSRCVQAFRARNWWVASIDVVENEEASASV-----IVKMTDSFTEQADQVTAEVGKL 66

Query: 64  FG--KIDVLVNNAGVQCVG-PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKI 120
            G  K+D ++  AG    G   ++      +  +  +++           H+       +
Sbjct: 67  LGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGG--LL 124

Query: 121 INVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG 160
              G+       P    Y  +K A+H L  +L  +     
Sbjct: 125 TLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMP 164

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 78.3 bits (192), Expect = 8e-19
 Identities = 39/171 (22%), Positives = 65/171 (38%), Gaps = 19/171 (11%)

Query: 4   GGIGHALARAFA---ASDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSV 53
            G G ALA   A   +    ++ + RS++ +  L++       D +  +   D+ +E  V
Sbjct: 16  RGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGV 75

Query: 54  QNVLSNVLE----KFGKIDVLVNNAGVQCV---GPLAEVPLSAMEQTFNTNVFGPMRLVQ 106
           Q +LS V E    +  +  +L+NNA        G L    L+ +   +  N+   + L  
Sbjct: 76  QRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTS 135

Query: 107 AVVPHMAYRKKGKII--NVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE 155
             +              N+ S+    P    G Y A KAA   L   L  E
Sbjct: 136 GTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE 186

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.8 bits (180), Expect = 3e-17
 Identities = 28/172 (16%), Positives = 53/172 (30%), Gaps = 14/172 (8%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD--------PRFFVQELDVLSEQSVQN 55
            G+G A A          V      +      +         P     E DV +  ++  
Sbjct: 15  SGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAK 74

Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
                ++       +   +    +       L   ++  + N+ G   +++ V   M   
Sbjct: 75  GKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQN 134

Query: 116 ------KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
                 ++G IIN  SV           Y+ASK  +  +T  +  +L   GI
Sbjct: 135 EPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGI 186

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 70.3 bits (171), Expect = 6e-16
 Identities = 23/169 (13%), Positives = 63/169 (37%), Gaps = 11/169 (6%)

Query: 2   SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ----DPRFFVQELDVLSEQSVQNVL 57
           S+  I + +A+A       +  T ++      +E+         V + DV  + S+  + 
Sbjct: 15  SKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMF 74

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAM-----EQTFNTNVFGPMRLVQAVVPHM 112
           + + + + K D  V++ G      L    ++A+     +   + + +  + + +A    +
Sbjct: 75  AELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSML 134

Query: 113 AYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
                  ++ +  +      P       +KA+L +    +   +G  G+
Sbjct: 135 --NPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGV 181

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 68.0 bits (165), Expect = 5e-15
 Identities = 30/175 (17%), Positives = 53/175 (30%), Gaps = 48/175 (27%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
            GIG A  +   A+  ++V      A +              D+ + +  +  +++VL K
Sbjct: 11  TGIGAATRKVLEAAGHQIVGIDIRDAEVIA------------DLSTAEGRKQAIADVLAK 58

Query: 64  FGK-IDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH----------- 111
             K +D LV  AG+     +       +    + N FG   L+ A +P            
Sbjct: 59  CSKGMDGLVLCAGLGPQTKV-------LGNVVSVNYFGATELMDAFLPALKKGHQPAAVV 111

Query: 112 ----------------MAYRKKGKIINVGSVT-VAAPGPWAGTYTASKAALHSLT 149
                               + G+     ++   A        Y  SK AL    
Sbjct: 112 ISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAV 166

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 65.9 bits (159), Expect = 3e-14
 Identities = 35/182 (19%), Positives = 62/182 (34%), Gaps = 24/182 (13%)

Query: 4   GGIGHALARAF---AASDCRVVATGRSKATMADLEQ----DPRFFVQELDVLSEQSVQN- 55
            G+G  L +A          +  T R++    +LE          + E+D+ +  +    
Sbjct: 12  RGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKL 71

Query: 56  -VLSNVLEKFGKIDVLVNNAGVQCVGPL-AEVPLSAMEQTFNTNVFGPMRLVQAVVPHMA 113
                 + K   ++VL NNAG+         V    +  T  TN   P+ L +A +P + 
Sbjct: 72  VADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLK 131

Query: 114 YRKKGKIIN--------------VGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHF 159
              K                   +              Y  SK+AL++ T +L ++L   
Sbjct: 132 KAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQ 191

Query: 160 GI 161
            I
Sbjct: 192 RI 193

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 61.8 bits (149), Expect = 4e-13
 Identities = 19/158 (12%), Positives = 38/158 (24%), Gaps = 7/158 (4%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEK 63
           G +G   A   A     VV  GR    +   +       +   V    +     ++  E 
Sbjct: 33  GPVGMRSAALLAGEGAEVVLCGRK---LDKAQAAADSVNKRFKVNVTAAETADDASRAEA 89

Query: 64  FGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINV 123
                 +     +     L  +P +A +   +  +         +               
Sbjct: 90  VKGAHFVFTAGAI----GLELLPQAAWQNESSIEIVADYNAQPPLGIGGIDATDKGKEYG 145

Query: 124 GSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
           G     A G         +A +  L ++         I
Sbjct: 146 GKRAFGALGIGGLKLKLHRACIAKLFESSEGVFDAEEI 183

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 52.7 bits (125), Expect = 2e-09
 Identities = 38/200 (19%), Positives = 52/200 (26%), Gaps = 44/200 (22%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMAD------------------------LEQDPR 39
             +G ++A    A    V       A  A+                              
Sbjct: 12  KRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVS 71

Query: 40  FFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQT------ 93
                  V        +++     +G+ DVLVNNA      PL        E        
Sbjct: 72  GADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREA 131

Query: 94  --------FNTNVFGPMRLV------QAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYT 139
                   F +N   P  L+       A  P         IIN+       P      YT
Sbjct: 132 METATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYT 191

Query: 140 ASKAALHSLTDTLRLELGHF 159
            +K AL  LT +  LEL   
Sbjct: 192 MAKGALEGLTRSAALELAPL 211

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 50.1 bits (118), Expect = 1e-08
 Identities = 28/166 (16%), Positives = 62/166 (37%), Gaps = 6/166 (3%)

Query: 2   SQGGIGHALARAFAASDCRVVATGRS----KATMADLEQDPRFFVQELDVLSEQSVQNVL 57
           +   I + +A++       +  T  +    K      ++    +V ELDV  E+  +++ 
Sbjct: 15  NNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLY 74

Query: 58  SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK 117
           ++V +  G +D +V++        L    L   +  FNT +   +  +  +   +     
Sbjct: 75  NSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLN 134

Query: 118 --GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
               ++ +  +              +KAAL S    L ++LG   I
Sbjct: 135 NGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHI 180

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 49.3 bits (116), Expect = 2e-08
 Identities = 13/163 (7%), Positives = 34/163 (20%), Gaps = 5/163 (3%)

Query: 4   GGIGHALARAFAASDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVLS 58
           G +G  LA   A     +V   R +        +         +  +         ++  
Sbjct: 10  GNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAV 69

Query: 59  NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKG 118
             +     ID   +   +     +    +                  + V   +   K  
Sbjct: 70  LTIPWEHAIDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLESEKVV 129

Query: 119 KIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGI 161
             ++       A       +          +  + + L     
Sbjct: 130 SALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEID 172

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 42.2 bits (97), Expect = 1e-05
 Identities = 27/197 (13%), Positives = 62/197 (31%), Gaps = 40/197 (20%)

Query: 2   SQGGIGHALARAFAASDCRVVATGRSKAT------------------------------- 30
              G G  +A+  +  + +++                                       
Sbjct: 12  DTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLP 71

Query: 31  ------MADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV--GPL 82
                  A+   +     +  ++L   ++++V + + +K+GKI++LV++          L
Sbjct: 72  FDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDL 131

Query: 83  AEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASK 142
                       + + +  + L +  V  M   +   I      +      + G  +++K
Sbjct: 132 LNTSRKGYLDALSKSSYSLISLCKYFVNIM-KPQSSIISLTYHASQKVVPGYGGGMSSAK 190

Query: 143 AALHSLTDTLRLELGHF 159
           AAL S T  L   LG  
Sbjct: 191 AALESDTRVLAYHLGRN 207

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 41.1 bits (95), Expect = 2e-05
 Identities = 26/157 (16%), Positives = 45/157 (28%), Gaps = 12/157 (7%)

Query: 4   GGIGHALARAFAASDCRVVA-TGRS-------KATMADLEQDPRFFVQELDVLSEQSVQN 55
           GG+G  +AR  A      +    RS          +A+LE            ++++    
Sbjct: 19  GGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVR 78

Query: 56  VLSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR 115
            L   +     +  + + A     G +  +    +E+     V G   L +         
Sbjct: 79  ELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHE----LTREL 134

Query: 116 KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTL 152
                +   S   A   P  G Y    A L  L    
Sbjct: 135 DLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQR 171

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 35.5 bits (80), Expect = 0.002
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 5  GIGHALARAFAASDCRVVATGRSKATMAD 33
           I   +AR       ++V TG  +  +  
Sbjct: 19 SIAFHIARVAQEQGAQLVLTGFDRLRLIQ 47

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 34.3 bits (77), Expect = 0.004
 Identities = 8/38 (21%), Positives = 14/38 (36%)

Query: 2  SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPR 39
             G G A+A++ AA+   ++      A         R
Sbjct: 18 DDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRR 55

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	162
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.97
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.97
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.97
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.97
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.96
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.96
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.95
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.95
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.94
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.94
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.93
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.87
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.75
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.73
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.66
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.65
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.63
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.63
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.62
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.61
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.55
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.55
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.54
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.49
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.48
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.47
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.47
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.46
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.43
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.43
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.42
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.4
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.4
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.36
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.19
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.18
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.13
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.01
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	98.77
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	98.66
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.6
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.53
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.53
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.49
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.99
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.97
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.75
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.7
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.64
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.64
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.63
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.57
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.49
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.46
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.46
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.37
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.35
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.35
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.34
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.33
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.17
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.14
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.13
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	97.13
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.11
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.05
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.01
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.99
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	96.92
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.74
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.71
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.66
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	96.62
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.62
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	96.57
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.54
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.54
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.47
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.4
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.33
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.32
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.29
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.29
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	96.25
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	96.24
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.23
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.23
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.23
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.15
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.07
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	95.95
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	95.91
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.87
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	95.53
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	95.47
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.47
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.41
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	95.38
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	95.3
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	95.28
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.26
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	95.26
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	95.23
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	95.15
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	95.15
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.14
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	95.13
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.0
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	94.91
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	94.87
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	94.87
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	94.82
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	94.81
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	94.8
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	94.77
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.65
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	94.61
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.57
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.56
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.51
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	94.46
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	94.44
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	94.39
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	94.16
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	94.13
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.07
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	94.03
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	93.99
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	93.97
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	93.79
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	93.78
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	93.69
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	93.66
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	93.59
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	93.44
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	93.36
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	93.28
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	93.21
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	93.15
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	93.12
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	92.95
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	92.9
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	92.61
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	92.45
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	92.42
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	92.35
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	92.34
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	92.25
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	92.23
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	92.17
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	92.16
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	92.03
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	91.98
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	91.95
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	91.88
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	91.54
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	91.52
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	91.52
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	91.51
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	91.39
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	91.17
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	91.1
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	90.93
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	90.82
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	90.24
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	90.22
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	90.17
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	90.04
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	89.7
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	89.7
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	89.33
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	89.09
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	88.94
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	88.88
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	88.81
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	88.47
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	88.26
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	87.95
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	87.62
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	87.58
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	87.28
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	87.17
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	86.83
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	86.58
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	86.52
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	85.44
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	85.2
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	84.09
d1uwva2	358	rRNA (Uracil-5-)-methyltransferase RumA, catalytic	84.04
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	83.57
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	83.36
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	83.27
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	83.21
d2b4aa1	118	Hypothetical protein BH3024 {Bacillus halodurans [	82.54
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	82.3
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	82.26
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	81.59
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	81.08
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	80.07

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=6.3e-42  Score=239.91  Aligned_cols=162  Identities=28%  Similarity=0.379  Sum_probs=155.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC--CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||+++|+.|+++|++|++++|++++++++.++  .+..++.+|++|+++++++++++.+++|++|++|||||...
T Consensus        13 Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idilinnAG~~~   92 (244)
T d1nffa_          13 GGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILN   92 (244)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEEEECCcccC
Confidence            8999999999999999999999999999988877653  56788999999999999999999999999999999999988


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ..++.+++.++|++++++|+.++++++|.++|.|++++.|+||++||..+..+.+....|+++|+|+.+|+|+++.|+++
T Consensus        93 ~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~  172 (244)
T d1nffa_          93 IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGP  172 (244)
T ss_dssp             CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             CCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHHHHHHHHHHHHHhcc
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +|||
T Consensus       173 ~gIr  176 (244)
T d1nffa_         173 SGIR  176 (244)
T ss_dssp             GTEE
T ss_pred             cCEE
Confidence            9986

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.6e-42  Score=242.01  Aligned_cols=162  Identities=29%  Similarity=0.409  Sum_probs=155.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC--CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||+++|+.|+++|++|++++|+++.++++.++  .+...+.+|++++++++++++++.+++|++|++|||||...
T Consensus        11 Gas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~   90 (243)
T d1q7ba_          11 GASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITR   90 (243)
T ss_dssp             SCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCC
T ss_pred             CCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcceehhhhhhcc
Confidence            8999999999999999999999999999988877653  56788999999999999999999999999999999999988


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ..++.+.+.++|++.+++|+.+++.++|+++|.|++++.|+||++||..+..+.++...|+++|+|+.+|+|+++.|+++
T Consensus        91 ~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~ela~  170 (243)
T d1q7ba_          91 DNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVAS  170 (243)
T ss_dssp             CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             ccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhCc
Confidence            89999999999999999999999999999999999988999999999999999999999999999999999999999999


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +|||
T Consensus       171 ~gIr  174 (243)
T d1q7ba_         171 RGIT  174 (243)
T ss_dssp             GTEE
T ss_pred             cCeE
Confidence            9986

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=1e-41  Score=240.15  Aligned_cols=162  Identities=28%  Similarity=0.317  Sum_probs=155.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC--CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||+++|++|+++|++|++++|+.++++++.++  .++.++++|++++++++++++++.+++|++|++|||||...
T Consensus        12 Gas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~   91 (254)
T d1hdca_          12 GGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGIST   91 (254)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             CcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEEEecCcccc
Confidence            8999999999999999999999999999988887665  46889999999999999999999999999999999999988


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ..++.+.+.++|++.+++|+.++++++|+++|.|++++.|+||++||..+..+.+....|+++|+|+.+|+|+|+.|+++
T Consensus        92 ~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~a~  171 (254)
T d1hdca_          92 GMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGT  171 (254)
T ss_dssp             CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             ccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHHHHHHHHHHHHHhCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +|||
T Consensus       172 ~gIr  175 (254)
T d1hdca_         172 DRIR  175 (254)
T ss_dssp             GTEE
T ss_pred             CceE
Confidence            9986

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=6.2e-42  Score=239.65  Aligned_cols=162  Identities=28%  Similarity=0.399  Sum_probs=154.2

Q ss_pred             CCCCchHHHHHHHHHHCCCe-------EEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCcc
Q 042185            1 CSQGGIGHALARAFAASDCR-------VVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKID   68 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~-------vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id   68 (162)
                      ||++|||+++|+.|+++|++       |++.+|+.+.++++..     ..+..++.+|++|+++++++++++.+++|++|
T Consensus         8 Gas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iD   87 (240)
T d2bd0a1           8 GAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERYGHID   87 (240)
T ss_dssp             TTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHHTSCCS
T ss_pred             cCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCcc
Confidence            89999999999999999997       9999999988776643     35788999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHH
Q 042185           69 VLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSL  148 (162)
Q Consensus        69 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l  148 (162)
                      ++|||||.....++.+.+.++|++++++|+.+++.++|+++|+|++++.|+||++||.++..+.|+...|+++|+|+.+|
T Consensus        88 ilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK~al~~l  167 (240)
T d2bd0a1          88 CLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGL  167 (240)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             eeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHHHHHHHHHH
Confidence            99999999988999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCCC
Q 042185          149 TDTLRLELGHFGID  162 (162)
Q Consensus       149 ~~~l~~e~~~~gi~  162 (162)
                      +|+|+.|++++|||
T Consensus       168 t~~la~el~~~gIr  181 (240)
T d2bd0a1         168 VETMRLYARKCNVR  181 (240)
T ss_dssp             HHHHHHHHTTTTEE
T ss_pred             HHHHHHHhCcCCeE
Confidence            99999999999986

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.1e-41  Score=239.33  Aligned_cols=161  Identities=27%  Similarity=0.328  Sum_probs=151.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||++|||+++|+.|+++|++|++++|+++..+. .++....++++|++|+++++++++++.+++|+||++|||||.....
T Consensus        12 Gas~GIG~aia~~la~~G~~V~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~   90 (248)
T d2d1ya1          12 GGARGIGRAIAQAFAREGALVALCDLRPEGKEV-AEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPG   90 (248)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHH-HHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCB
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEeCcCCCCC
Confidence            899999999999999999999999999876543 3344567889999999999999999999999999999999998889


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccCC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG  160 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~g  160 (162)
                      ++.+.+.++|++.+++|+.+++.++|+++|+|++++.|+||+++|..+..+.+....|+++|+|+.+|+|+++.|++++|
T Consensus        91 ~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~g  170 (248)
T d2d1ya1          91 SALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLR  170 (248)
T ss_dssp             CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             ChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHHHhhhhC
Confidence            99999999999999999999999999999999998899999999999999999999999999999999999999999999


Q ss_pred             CC
Q 042185          161 ID  162 (162)
Q Consensus       161 i~  162 (162)
                      ||
T Consensus       171 Ir  172 (248)
T d2d1ya1         171 IR  172 (248)
T ss_dssp             EE
T ss_pred             cE
Confidence            86

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=2.9e-41  Score=238.52  Aligned_cols=162  Identities=24%  Similarity=0.342  Sum_probs=152.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||++|||+++|+.|+++|++|++++|+.+.++++..       +.++.++.+|++|+++++++++++.+++|++|++|||
T Consensus        11 Gas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnn   90 (258)
T d1iy8a_          11 GGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNN   90 (258)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEEC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            899999999999999999999999999887765432       3578899999999999999999999999999999999


Q ss_pred             CCCC-CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHH
Q 042185           74 AGVQ-CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTL  152 (162)
Q Consensus        74 ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l  152 (162)
                      ||+. ...++.+++.++|++.+++|+.++++++|+++|.|++++.|+||++||..+..+.+....|+++|+|+.+|+|+|
T Consensus        91 AG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~l  170 (258)
T d1iy8a_          91 AGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNS  170 (258)
T ss_dssp             CCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHHHHHHHHHHH
T ss_pred             CcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHHHHHHHHHHHHH
Confidence            9975 456899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhccCCCC
Q 042185          153 RLELGHFGID  162 (162)
Q Consensus       153 ~~e~~~~gi~  162 (162)
                      +.|++++|||
T Consensus       171 A~el~~~gIr  180 (258)
T d1iy8a_         171 AVEYGRYGIR  180 (258)
T ss_dssp             HHHHGGGTCE
T ss_pred             HHHhCccCce
Confidence            9999999996

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=2.7e-41  Score=237.34  Aligned_cols=162  Identities=30%  Similarity=0.368  Sum_probs=151.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhH-Hhhh--cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATM-ADLE--QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~-~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      ||++|||+++|+.|+++|++|++++|+++.. ++..  ...++.++.+|++|+++++++++++.+++|++|++|||||..
T Consensus        12 Gas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDilVnnAG~~   91 (247)
T d2ew8a1          12 GGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIY   91 (247)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            8999999999999999999999999986432 2221  246788999999999999999999999999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhc
Q 042185           78 CVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                      ...++.+.+.++|++.+++|+.++++++|+++|.|++++.|+||++||..+..+.+....|+++|+|+.+|+|+|+.|++
T Consensus        92 ~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela  171 (247)
T d2ew8a1          92 PLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLG  171 (247)
T ss_dssp             CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhccHHHHHHHHHHHhc
Confidence            88999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCC
Q 042185          158 HFGID  162 (162)
Q Consensus       158 ~~gi~  162 (162)
                      ++|||
T Consensus       172 ~~gIr  176 (247)
T d2ew8a1         172 KDGIT  176 (247)
T ss_dssp             GGTEE
T ss_pred             ccCeE
Confidence            99986

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.4e-41  Score=239.30  Aligned_cols=162  Identities=23%  Similarity=0.329  Sum_probs=154.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||+++|+.|+++|++|++++|+.+.++++.+     ..++.++.+|++|+++++++++++.+++|++|++|||||
T Consensus        17 Gas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnag   96 (251)
T d2c07a1          17 GAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAG   96 (251)
T ss_dssp             STTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCC
T ss_pred             CCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCceeeeeccc
Confidence            899999999999999999999999999988776543     357889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....++.+.+.++|++++++|+.++++++|+++|.|++++.|+||++||..+..+.+....|+++|+|+.+|+|+|+.|
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltr~lA~e  176 (251)
T d2c07a1          97 ITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKE  176 (251)
T ss_dssp             CCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            98888999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      ++++|||
T Consensus       177 l~~~gIr  183 (251)
T d2c07a1         177 LASRNIT  183 (251)
T ss_dssp             HGGGTEE
T ss_pred             hhhhCeE
Confidence            9999986

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=2.5e-41  Score=237.08  Aligned_cols=162  Identities=27%  Similarity=0.369  Sum_probs=151.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEe-cChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATG-RSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~-r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|++.+ |+.+.++++.+     ..++.++++|++|+++++++++++.+++|++|++||||
T Consensus         8 Gas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnA   87 (244)
T d1edoa_           8 GASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNA   87 (244)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCcccccc
Confidence            8999999999999999999999875 56555555433     36788999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.++|++.+++|+.+++.++|+++|+|+++++|+||++||..+..+.++...|+++|+|+.+|+|+|+.
T Consensus        88 g~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltk~lA~  167 (244)
T d1edoa_          88 GITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAR  167 (244)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHHChHHHHH
Confidence            99888999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       168 el~~~gIr  175 (244)
T d1edoa_         168 EGASRNIN  175 (244)
T ss_dssp             HHHTTTEE
T ss_pred             HHhhhCcE
Confidence            99999986

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=6e-41  Score=236.02  Aligned_cols=162  Identities=32%  Similarity=0.512  Sum_probs=151.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|+.|+++|++|++++|+.+.+++..+      ..++.++.+|++++++++++++++.+++|++|++||||
T Consensus        12 Gas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnA   91 (251)
T d1vl8a_          12 GGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAA   91 (251)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            899999999999999999999999999887765533      35788999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccccc-CCCCCchhhhHhHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVA-APGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      |.....++.+.+.++|++.+++|+.++++++|+++|.|++++.|+||+++|..+. .+.+....|+++|+|+.+|+|+|+
T Consensus        92 G~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~asKaal~~lt~~lA  171 (251)
T d1vl8a_          92 GINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALA  171 (251)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHHHHhHHHHHHHHH
Confidence            9988899999999999999999999999999999999999889999999997664 577888999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       172 ~e~~~~gIr  180 (251)
T d1vl8a_         172 KEWGRYGIR  180 (251)
T ss_dssp             HHHGGGTCE
T ss_pred             HHhcccCeE
Confidence            999999996

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=4.2e-41  Score=238.14  Aligned_cols=162  Identities=27%  Similarity=0.418  Sum_probs=152.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh-hhHHhhhc------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK-ATMADLEQ------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~-~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||++|||+++|++|+++|++|++++|+. +.++++.+      ..++.++.+|++|+++++++++++.+++|++|++|||
T Consensus        11 Gas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnn   90 (260)
T d1x1ta1          11 GSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNN   90 (260)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCSEEEEC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhCCCcEEEee
Confidence            8999999999999999999999999974 44444322      3678899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      ||.....++.+.+.++|++.+++|+.+++.++|+++|+|++++.|+||++||..+..+.++...|+++|+|+.+|+|+++
T Consensus        91 AG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA  170 (260)
T d1x1ta1          91 AGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTA  170 (260)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhhhHHHhHHHHH
Confidence            99988899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       171 ~el~~~gIr  179 (260)
T d1x1ta1         171 LETAGQGIT  179 (260)
T ss_dssp             HHHTTTTEE
T ss_pred             HHhchhCcE
Confidence            999999986

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=3.1e-41  Score=238.46  Aligned_cols=162  Identities=30%  Similarity=0.392  Sum_probs=152.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||+++|+.|+++|++|++++|+++.++++.+     ..++.++.+|++|+++++++++++.+++|+||++|||||
T Consensus         9 Gas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG   88 (257)
T d2rhca1           9 GATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG   88 (257)
T ss_dssp             SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEeccc
Confidence            899999999999999999999999999888776644     357899999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHh--HhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPH--MAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      +....++.+.+.++|++.+++|+.++++++|+++|+  |.+++.|+||+++|..+..+.+....|+++|+|+.+|+|+|+
T Consensus        89 ~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk~lA  168 (257)
T d2rhca1          89 RPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALG  168 (257)
T ss_dssp             CCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHHHHHHHHHHH
Confidence            988899999999999999999999999999999997  456677999999999999999999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       169 ~el~~~gIr  177 (257)
T d2rhca1         169 LELARTGIT  177 (257)
T ss_dssp             HHTTTSEEE
T ss_pred             HHhhhhCcE
Confidence            999999986

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=5.7e-41  Score=236.79  Aligned_cols=162  Identities=28%  Similarity=0.362  Sum_probs=152.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||+++|++|+++|++|++++|+++.++++.+     ..++.++.+|++|+++++++++++.+++|++|++|||||
T Consensus         8 Gas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG   87 (255)
T d1gega_           8 GAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAG   87 (255)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCC
T ss_pred             CCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEeccc
Confidence            899999999999999999999999999988776643     357889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      +....++.+++.++|++.+++|+.++++++|+++|.|.+++ .++||++||..+..+.|....|+++|+|+.+|+|+|+.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~  167 (255)
T d1gega_          88 VAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAAR  167 (255)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHHhhHHHHHH
Confidence            98889999999999999999999999999999999877654 68899999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       168 el~~~gIr  175 (255)
T d1gega_         168 DLAPLGIT  175 (255)
T ss_dssp             HHGGGTEE
T ss_pred             HhhhhCcE
Confidence            99999986

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=8.9e-41  Score=234.01  Aligned_cols=161  Identities=27%  Similarity=0.358  Sum_probs=152.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||++|||+++|+.|+++|++|++++|+.+.++++.++.+..++.||++|+++++++++++.+++|++|++|||||+....
T Consensus        12 Gas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~   91 (242)
T d1ulsa_          12 GAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDN   91 (242)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEECCcccccC
Confidence            89999999999999999999999999999999998888899999999999999999999999999999999999998889


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccCC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG  160 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~g  160 (162)
                      ++.+++.++|++.+++|+.++++++|+++|.|++++.+.++++|| .+..+.++...|+++|+|+.+|+|+|+.|++++|
T Consensus        92 ~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss-~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~g  170 (242)
T d1ulsa_          92 FHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTAS-RVYLGNLGQANYAASMAGVVGLTRTLALELGRWG  170 (242)
T ss_dssp             CGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC-GGGGCCTTCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             chhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecc-ccccCCCCCcchHHHHHHHHHHHHHHHHHHhhhC
Confidence            999999999999999999999999999999998887777777776 5677888999999999999999999999999999


Q ss_pred             CC
Q 042185          161 ID  162 (162)
Q Consensus       161 i~  162 (162)
                      ||
T Consensus       171 Ir  172 (242)
T d1ulsa_         171 IR  172 (242)
T ss_dssp             EE
T ss_pred             cE
Confidence            86

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.2e-41  Score=235.56  Aligned_cols=161  Identities=28%  Similarity=0.445  Sum_probs=151.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++.+     ..++.++++|++++++++++++++.+++|++|++|||||
T Consensus        18 Gas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDilvnnAG   97 (255)
T d1fmca_          18 GAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAG   97 (255)
T ss_dssp             TTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEeeeCCc
Confidence            899999999999999999999999999888776543     357889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....++ +.+.++|++++++|+.+++.++|+++|.|+++++++||++||..+..+.++...|+++|+|+.+|+|+++.|
T Consensus        98 ~~~~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e  176 (255)
T d1fmca_          98 GGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFD  176 (255)
T ss_dssp             CCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchhHHHHHHHHHHHHHHH
Confidence            8777666 789999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccCCCC
Q 042185          156 LGHFGID  162 (162)
Q Consensus       156 ~~~~gi~  162 (162)
                      ++++|||
T Consensus       177 l~~~gIr  183 (255)
T d1fmca_         177 LGEKNIR  183 (255)
T ss_dssp             HHTTTEE
T ss_pred             hCccCeE
Confidence            9999986

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=7.1e-41  Score=236.86  Aligned_cols=162  Identities=29%  Similarity=0.421  Sum_probs=153.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||+++|+.|+++|++|++++|+.+.++++.+     ..++.++.||++++++++++++++.+++|++|++|||||
T Consensus        12 Gas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnaG   91 (260)
T d1zema1          12 GAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAG   91 (260)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCeehhhhc
Confidence            899999999999999999999999999988776643     357889999999999999999999999999999999999


Q ss_pred             CCC-CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           76 VQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        76 ~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      ... ..++.+++.++|++.+++|+.++++++++++|.|.+++.|+||++||..+..+.+....|+++|+|+.+|+|+|+.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~  171 (260)
T d1zema1          92 YQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAAL  171 (260)
T ss_dssp             CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHHHHHHHHHHHHH
Confidence            764 4789999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       172 el~~~gIr  179 (260)
T d1zema1         172 DLAPYNIR  179 (260)
T ss_dssp             HHGGGTEE
T ss_pred             HhhhhCCE
Confidence            99999986

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=1.3e-40  Score=235.26  Aligned_cols=162  Identities=22%  Similarity=0.326  Sum_probs=153.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcC-CccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFG-KIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~-~id~vi~~a   74 (162)
                      ||++|||+++|+.|+++|++|++++|+.+.++++.+     ..+..++.+|++|+++++++++++.++++ ++|++||||
T Consensus        15 Gas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~idilvnnA   94 (259)
T d2ae2a_          15 GGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNA   94 (259)
T ss_dssp             SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEECC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCCceEEEECC
Confidence            899999999999999999999999999988876644     35788899999999999999999999987 899999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+++.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.|....|+++|+|+.+|+|+++.
T Consensus        95 G~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~  174 (259)
T d2ae2a_          95 GIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAF  174 (259)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             ceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHHHHHHHHHHHHHH
Confidence            99888899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       175 el~~~gIr  182 (259)
T d2ae2a_         175 EWAKDNIR  182 (259)
T ss_dssp             HTGGGTEE
T ss_pred             HhCcCceE
Confidence            99999986

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=2.1e-40  Score=233.99  Aligned_cols=162  Identities=32%  Similarity=0.469  Sum_probs=153.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||+++|+.|+++|++|++++|+.+.++++.+  ..++.++.+|++++++++++++++.+++|++|++|||||...
T Consensus        12 Gas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilVnnAg~~~   91 (256)
T d1k2wa_          12 GSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALFD   91 (256)
T ss_dssp             TCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEeeccccc
Confidence            899999999999999999999999999988887765  367889999999999999999999999999999999999988


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-CCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                      ..++.+++.++|++.+++|+.+++.++|++.|.|.++ ++|+||++||..+..+.+....|+++|+|+.+|+|+++.|++
T Consensus        92 ~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~  171 (256)
T d1k2wa_          92 LAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLI  171 (256)
T ss_dssp             CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhhhHHHHHHHHHHHHhc
Confidence            8999999999999999999999999999999986554 579999999999999999999999999999999999999999


Q ss_pred             cCCCC
Q 042185          158 HFGID  162 (162)
Q Consensus       158 ~~gi~  162 (162)
                      ++|||
T Consensus       172 ~~gIr  176 (256)
T d1k2wa_         172 RHGIN  176 (256)
T ss_dssp             GGTEE
T ss_pred             ccCeE
Confidence            99986

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-40  Score=233.65  Aligned_cols=161  Identities=29%  Similarity=0.460  Sum_probs=151.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC-
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC-   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~-   78 (162)
                      ||++|||+++|+.|+++|++|++++|+++.++++.++ ....++.+|++|+++++++++++.+++|++|++|||||... 
T Consensus        13 Gas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~   92 (250)
T d1ydea1          13 GGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPP   92 (250)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEEeccccccc
Confidence            8999999999999999999999999999988887654 56789999999999999999999999999999999999754 


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ..++.+.+.++|++.+++|+.+++.++|+++|.|+++ +|+||++||..+..+.+....|+++|+|+.+|+|+|+.|+++
T Consensus        93 ~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~a~  171 (250)
T d1ydea1          93 PQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESP  171 (250)
T ss_dssp             CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             ccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-CCCCcccccccccccccCcchhHHHHhhHHHHHHHHHHHhcc
Confidence            4678899999999999999999999999999999765 589999999999999999999999999999999999999999


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +|||
T Consensus       172 ~gIr  175 (250)
T d1ydea1         172 YGVR  175 (250)
T ss_dssp             GTCE
T ss_pred             cCeE
Confidence            9997

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=5.3e-40  Score=231.23  Aligned_cols=162  Identities=23%  Similarity=0.329  Sum_probs=151.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||++|||+++|+.|+++|++|++++|+.+.++++.+    ..++.++.+|++|+++++++++++.+++|+||++|||||.
T Consensus        13 Gas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAg~   92 (251)
T d1zk4a1          13 GGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGI   92 (251)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCceEEEecccc
Confidence            899999999999999999999999999887776543    4678899999999999999999999999999999999999


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCC-CeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK-GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      ...+++.+++.++|++++++|+.++++++++++|.|++++. ++||++||..+..+.|....|+++|+|+.+|+|+++.|
T Consensus        93 ~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e  172 (251)
T d1zk4a1          93 AVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALD  172 (251)
T ss_dssp             CCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHHHHhcchHHHHHH
Confidence            98899999999999999999999999999999999988775 58999999999999999999999999999999999999


Q ss_pred             --hccCCCC
Q 042185          156 --LGHFGID  162 (162)
Q Consensus       156 --~~~~gi~  162 (162)
                        ++++|||
T Consensus       173 ~~l~~~gIr  181 (251)
T d1zk4a1         173 CALKDYDVR  181 (251)
T ss_dssp             HHHTTCSEE
T ss_pred             HhcCCCcEE
Confidence              5688886

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.4e-40  Score=233.92  Aligned_cols=162  Identities=23%  Similarity=0.309  Sum_probs=139.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHc-CCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKF-GKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~id~vi~~a   74 (162)
                      ||++|||+++|+.|+++|++|++++|+++.++++.+     ..++.++.+|++++++++++++++.+++ |++|++||||
T Consensus        15 Gas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~idilvnnA   94 (259)
T d1xq1a_          15 GGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNL   94 (259)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCCcccccccc
Confidence            899999999999999999999999999988776643     3678999999999999999999999998 7899999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.++|++.+++|+.++++++|+++|.|++++.|+||++||..+..+.+....|+++|+|+.+|+|+++.
T Consensus        95 G~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~  174 (259)
T d1xq1a_          95 GAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLAC  174 (259)
T ss_dssp             CC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccccccccccccchhhhhHHHHH
Confidence            99888999999999999999999999999999999999999899999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       175 e~~~~gIr  182 (259)
T d1xq1a_         175 EWASDGIR  182 (259)
T ss_dssp             HHGGGTCE
T ss_pred             HhcccCeE
Confidence            99999996

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.2e-40  Score=231.24  Aligned_cols=156  Identities=29%  Similarity=0.385  Sum_probs=139.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||++|||+++|++|+++|++|++++|+.+..+      .+..+.+|++|+++++++++++.+++|++|++|||||.....
T Consensus        14 Gas~GIG~aia~~la~~Ga~V~~~~r~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~   87 (237)
T d1uzma1          14 GGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK------GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADA   87 (237)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------TSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC--
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCcchhc------CceEEEEecCCHHHHHHHHHHHHHhcCCceEEEeeecccccc
Confidence            89999999999999999999999999876543      456789999999999999999999999999999999998889


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccCC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG  160 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~g  160 (162)
                      ++.+.+.++|++++++|+.+++.++|+++|.|++++.|+||++||..+..+.++...|+++|+|+.+|+|+++.|++++|
T Consensus        88 ~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~g  167 (237)
T d1uzma1          88 FLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKAN  167 (237)
T ss_dssp             ---CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             cHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHHHHHHHHHHHHhhhhcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CC
Q 042185          161 ID  162 (162)
Q Consensus       161 i~  162 (162)
                      ||
T Consensus       168 Ir  169 (237)
T d1uzma1         168 VT  169 (237)
T ss_dssp             EE
T ss_pred             ce
Confidence            86

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=8.4e-40  Score=231.25  Aligned_cols=162  Identities=30%  Similarity=0.422  Sum_probs=149.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh-hHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA-TMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~-~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|++++|+.+ .++++.+     ..++.++++|++|+++++++++++.+++|+||++||||
T Consensus        14 Gas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnA   93 (261)
T d1geea_          14 GSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNA   93 (261)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEeeccc
Confidence            89999999999999999999999999854 3443322     36788999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCC-CeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKK-GKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      |.....++.+++.++|++.+++|+.+++.++|+++|.|.+++. +.||++||.++..+.|....|+++|+|+.+|+|+|+
T Consensus        94 G~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA  173 (261)
T d1geea_          94 GLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLA  173 (261)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             eecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccCCccchhhHHHHH
Confidence            9988889999999999999999999999999999999987764 468999999999999999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       174 ~e~~~~gIr  182 (261)
T d1geea_         174 LEYAPKGIR  182 (261)
T ss_dssp             HHHGGGTCE
T ss_pred             HHhhhhCcE
Confidence            999999996

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-40  Score=231.89  Aligned_cols=159  Identities=25%  Similarity=0.343  Sum_probs=150.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||++|||+++|++|+++|++|++++|+.++++++..     ..++..+.||++|+++++.+++++.+++|++|++|||||
T Consensus        14 Gas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idilinnag   93 (244)
T d1yb1a_          14 GAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAG   93 (244)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCceeEeecc
Confidence            899999999999999999999999999998887654     357889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLE  155 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e  155 (162)
                      .....++.+.+.+.|++++++|+.+++.++++++|.|++++.|+||++||..+..+.|+++.|++||+|+.+|+++|+.|
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~~~~~La~E  173 (244)
T d1yb1a_          94 VVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDE  173 (244)
T ss_dssp             CCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            98888999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccC
Q 042185          156 LGHF  159 (162)
Q Consensus       156 ~~~~  159 (162)
                      ++++
T Consensus       174 l~~~  177 (244)
T d1yb1a_         174 LAAL  177 (244)
T ss_dssp             HHHT
T ss_pred             HHhh
Confidence            9874

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=1.1e-39  Score=229.79  Aligned_cols=161  Identities=26%  Similarity=0.304  Sum_probs=151.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||+++|+.|+++|++|++++|+++.++++.+  ..+..++++|++++++++++++++.+++|++|++|||||...
T Consensus        13 Gas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDilVnnAG~~~   92 (253)
T d1hxha_          13 GGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILL   92 (253)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeEEecccccC
Confidence            899999999999999999999999999988887765  366888999999999999999999999999999999999988


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ..++.+.+.++|++.+++|+.+++.++++++|.|++ ++|+||++||..+..+.+....|+++|+|+.+|+|+++.|+++
T Consensus        93 ~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~-~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~  171 (253)
T d1hxha_          93 PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKE-TGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRK  171 (253)
T ss_dssp             CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT-TCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHh-cCCceecccchhhhcCccccccccchhHHHHHHHHHHHHHHhh
Confidence            889999999999999999999999999999999964 4699999999999999999999999999999999999999998


Q ss_pred             C--CCC
Q 042185          159 F--GID  162 (162)
Q Consensus       159 ~--gi~  162 (162)
                      +  |||
T Consensus       172 ~g~~Ir  177 (253)
T d1hxha_         172 QGYAIR  177 (253)
T ss_dssp             HTCCEE
T ss_pred             cCCCEE
Confidence            5  475

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=6.6e-39  Score=227.69  Aligned_cols=162  Identities=27%  Similarity=0.414  Sum_probs=148.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++.+    ...+.++.||++|+++++++++++.+++|++|++|||||.
T Consensus        13 Gas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~   92 (268)
T d2bgka1          13 GGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGV   92 (268)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcceecccccc
Confidence            899999999999999999999999999988776644    3567889999999999999999999999999999999998


Q ss_pred             CCCC--CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCc-hhhhHhHHHHHHHHHHHH
Q 042185           77 QCVG--PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWA-GTYTASKAALHSLTDTLR  153 (162)
Q Consensus        77 ~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-~~y~~sKaa~~~l~~~l~  153 (162)
                      ....  .+.+.+.++|++++++|+.+++.++|+++|.|.+++.|+||+++|..+..+.++. ..|+++|+|+.+|+|+++
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~asKaal~~lt~~lA  172 (268)
T d2bgka1          93 LSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLC  172 (268)
T ss_dssp             CCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchhHHHHHhCHHHHH
Confidence            6544  4778999999999999999999999999999999999999999999998876654 589999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .||+++|||
T Consensus       173 ~el~~~gIr  181 (268)
T d2bgka1         173 TELGEYGIR  181 (268)
T ss_dssp             HHHGGGTEE
T ss_pred             HHhChhCeE
Confidence            999999986

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=9.4e-40  Score=230.17  Aligned_cols=161  Identities=26%  Similarity=0.311  Sum_probs=149.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC-C
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC-V   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~-~   79 (162)
                      ||++|||+++|+.|+++|++|++.+|+.+.++++... ...+..+|+++.++++++++++.+++|+||++|||||+.. .
T Consensus         7 Gas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~-~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~~~~~   85 (252)
T d1zmta1           7 NVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAF-AETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEF   85 (252)
T ss_dssp             STTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHH-HHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCCCCCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhh-hCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCC
Confidence            8999999999999999999999999998877766432 2234579999999999999999999999999999999764 4


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccC
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHF  159 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~  159 (162)
                      .++.+.+.++|++.+++|+.++++++|+++|.|++++.|+||++||..+..+.+....|+++|+|+.+|+|+|+.|++++
T Consensus        86 ~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~ela~~  165 (252)
T d1zmta1          86 QPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEY  165 (252)
T ss_dssp             CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHHHHHHHHHhccc
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCC
Q 042185          160 GID  162 (162)
Q Consensus       160 gi~  162 (162)
                      |||
T Consensus       166 gIr  168 (252)
T d1zmta1         166 NIP  168 (252)
T ss_dssp             TCC
T ss_pred             CcE
Confidence            997

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.6e-38  Score=226.11  Aligned_cols=162  Identities=29%  Similarity=0.400  Sum_probs=144.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC--------CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD--------PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~--------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      ||++|||+++|+.|+++|++|++++|+.+.++++.++        .++.++.+|++++++++.+++++.+++|++|++||
T Consensus        12 Gas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilvn   91 (272)
T d1xkqa_          12 GSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVN   91 (272)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHhCCceEEEe
Confidence            8999999999999999999999999999887765431        35789999999999999999999999999999999


Q ss_pred             CCCCCCCCCC----CCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHH
Q 042185           73 NAGVQCVGPL----AEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSL  148 (162)
Q Consensus        73 ~ag~~~~~~~----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l  148 (162)
                      |||.....++    .+.+.+.|++++++|+.+++.++|+++|.|++++++.|+++||.++..+.+....|+++|+|+.+|
T Consensus        92 nAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~Y~asKaal~~l  171 (272)
T d1xkqa_          92 NAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQY  171 (272)
T ss_dssp             CCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHHHHHHHHHHHHH
T ss_pred             CCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcchhhhHHHHHHHH
Confidence            9998765544    456777899999999999999999999999876655455555567889999999999999999999


Q ss_pred             HHHHHHHhccCCCC
Q 042185          149 TDTLRLELGHFGID  162 (162)
Q Consensus       149 ~~~l~~e~~~~gi~  162 (162)
                      +|+|+.|++++|||
T Consensus       172 tk~lA~el~~~gIr  185 (272)
T d1xkqa_         172 TRSTAIDLAKFGIR  185 (272)
T ss_dssp             HHHHHHHHHTTTCE
T ss_pred             HHHHHHHhcccCeE
Confidence            99999999999996

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.3e-38  Score=225.66  Aligned_cols=161  Identities=31%  Similarity=0.446  Sum_probs=138.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC--------CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD--------PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~--------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++.++        .++.++.+|++++++++++++++.+++|++|++||
T Consensus        12 Gas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvn   91 (264)
T d1spxa_          12 GSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVN   91 (264)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEeec
Confidence            8999999999999999999999999999887765432        35889999999999999999999999999999999


Q ss_pred             CCCCCCC----CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecc-ccccCCCCCchhhhHhHHHHHH
Q 042185           73 NAGVQCV----GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGS-VTVAAPGPWAGTYTASKAALHS  147 (162)
Q Consensus        73 ~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS-~~~~~~~~~~~~y~~sKaa~~~  147 (162)
                      |||....    .++.+.+.++|++.+++|+.+++.++|+++|.|++++ |.+|+++| .++..+.|....|+++|+|+.+
T Consensus        92 nAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~~~Y~asKaal~~  170 (264)
T d1spxa_          92 NAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYYSIAKAAIDQ  170 (264)
T ss_dssp             CCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHHHHHHHHHHHH
T ss_pred             ccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccCCCchhhhhhhhhHHH
Confidence            9997543    3456678999999999999999999999999997765 55555555 4568899999999999999999


Q ss_pred             HHHHHHHHhccCCCC
Q 042185          148 LTDTLRLELGHFGID  162 (162)
Q Consensus       148 l~~~l~~e~~~~gi~  162 (162)
                      |+|+|+.|++++|||
T Consensus       171 lt~~lA~el~~~gIr  185 (264)
T d1spxa_         171 YTRNTAIDLIQHGIR  185 (264)
T ss_dssp             HHHHHHHHHGGGTCE
T ss_pred             HHHHHHHHhcccCeE
Confidence            999999999999997

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=3.3e-38  Score=222.79  Aligned_cols=162  Identities=25%  Similarity=0.324  Sum_probs=154.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHc-CCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKF-GKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~id~vi~~a   74 (162)
                      ||++|||+++|+.|+++|++|++++|+++.++++.+     ...+.++.+|++++++++++++++.+++ +++|++|||+
T Consensus        13 Gas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~idilinna   92 (258)
T d1ae1a_          13 GGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNA   92 (258)
T ss_dssp             SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCCcEEEeccc
Confidence            899999999999999999999999999988776644     3677889999999999999999999998 6899999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+++.++|++++++|+.+++++++++.|.|.+++.|+||++||..+..+.+....|+++|+|+.+|+|.+++
T Consensus        93 g~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~al~~lt~~lA~  172 (258)
T d1ae1a_          93 GVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLAC  172 (258)
T ss_dssp             CCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHHH
Confidence            99988999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhccCCCC
Q 042185          155 ELGHFGID  162 (162)
Q Consensus       155 e~~~~gi~  162 (162)
                      |++++|||
T Consensus       173 el~~~gIr  180 (258)
T d1ae1a_         173 EWAKDNIR  180 (258)
T ss_dssp             HHGGGTEE
T ss_pred             hcCcCcEE
Confidence            99999986

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.5e-38  Score=225.27  Aligned_cols=162  Identities=27%  Similarity=0.376  Sum_probs=148.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC--------CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD--------PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~--------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      ||++|||+++|+.|+++|++|++++|+.+.++++.++        .++.++.+|++++++++++++++.+++|++|++||
T Consensus        11 Gas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVn   90 (274)
T d1xhla_          11 GSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVN   90 (274)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHcCCceEEEe
Confidence            8999999999999999999999999998887765432        36789999999999999999999999999999999


Q ss_pred             CCCCCCCC--CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           73 NAGVQCVG--PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        73 ~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      |||.....  +..+.+.++|++.+++|+.+++.++|++.|.|++++++.|+++||..+..+.+....|+++|+|+.+|+|
T Consensus        91 nAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~asKaal~~ltk  170 (274)
T d1xhla_          91 NAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTR  170 (274)
T ss_dssp             CCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHHHHHHHHHHHH
T ss_pred             ecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehhhhhHHHHHHH
Confidence            99975443  4556788999999999999999999999999998888999999999999999999999999999999999


Q ss_pred             HHHHHhccCCCC
Q 042185          151 TLRLELGHFGID  162 (162)
Q Consensus       151 ~l~~e~~~~gi~  162 (162)
                      +++.|++++|||
T Consensus       171 ~lA~ela~~gIr  182 (274)
T d1xhla_         171 CTAIDLIQHGVR  182 (274)
T ss_dssp             HHHHHHGGGTCE
T ss_pred             HHHHHHhHhCCc
Confidence            999999999997

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-38  Score=220.79  Aligned_cols=158  Identities=30%  Similarity=0.416  Sum_probs=145.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      ||++|||+++|+.|+++|++|++++|+++.++++..+ ..+..+.+|++|++++++++    +++|++|++|||||....
T Consensus        14 Gas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~----~~~g~iDilVnnAg~~~~   89 (244)
T d1pr9a_          14 GAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERAL----GSVGPVDLLVNNAAVALL   89 (244)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHH----TTCCCCCEEEECCCCCCC
T ss_pred             CCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHH----HHhCCceEEEeccccccc
Confidence            8999999999999999999999999999988877653 46788999999999887765    457999999999999888


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHh-hcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMA-YRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      .++.+++.++|++.+++|+.+++.++++++|.|. +++.|+||++||..+..+.|....|+++|+|+.+|+|+++.|+++
T Consensus        90 ~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~  169 (244)
T d1pr9a_          90 QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGP  169 (244)
T ss_dssp             BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             cchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhHHHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999999754 456799999999999999999999999999999999999999999


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +|||
T Consensus       170 ~gIr  173 (244)
T d1pr9a_         170 HKIR  173 (244)
T ss_dssp             GTEE
T ss_pred             CcEE
Confidence            9986

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.4e-38  Score=228.98  Aligned_cols=162  Identities=25%  Similarity=0.300  Sum_probs=148.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh---------hHHhhhcC--CceeEEEeccCChHHHHHHHHHHHHHcCCccE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA---------TMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDV   69 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~---------~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~   69 (162)
                      ||++|||+++|+.|+++|++|++.+++.+         .++++.++  .......+|+++.++++++++++.+++|+||+
T Consensus        14 Gas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~G~iDi   93 (302)
T d1gz6a_          14 GAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTALDTFGRIDV   93 (302)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHHHHTSCCCE
T ss_pred             CCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHcCCCCE
Confidence            89999999999999999999999987643         23333222  34566789999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHH
Q 042185           70 LVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLT  149 (162)
Q Consensus        70 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~  149 (162)
                      +|||||+...+++.+++.++|++++++|+.+++.++|+++|+|++++.|+||++||..+..+.++...|+++|+|+.+|+
T Consensus        94 LVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt  173 (302)
T d1gz6a_          94 VVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLA  173 (302)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHH
T ss_pred             EEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCcHHHHHHHHHHHHHH
Confidence            99999999889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhccCCCC
Q 042185          150 DTLRLELGHFGID  162 (162)
Q Consensus       150 ~~l~~e~~~~gi~  162 (162)
                      ++|+.|++++|||
T Consensus       174 ~~la~E~~~~gIr  186 (302)
T d1gz6a_         174 NTLVIEGRKNNIH  186 (302)
T ss_dssp             HHHHHHTGGGTEE
T ss_pred             HHHHHHHhccCCc
Confidence            9999999999986

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.4e-38  Score=220.24  Aligned_cols=158  Identities=30%  Similarity=0.438  Sum_probs=145.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++.++ ..+.++.+|++|++++++++    +++|++|++|||||....
T Consensus        12 Gas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~----~~~g~iDilVnnAg~~~~   87 (242)
T d1cyda_          12 GAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKAL----GGIGPVDLLVNNAALVIM   87 (242)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHH----TTCCCCSEEEECCCCCCC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHH----HHcCCCeEEEECCccccc
Confidence            8999999999999999999999999999888877554 56888999999999887665    457999999999999888


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-CCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      .++.+++.++|++.+++|+.+++.++|.+.|.|.++ .+|+||+++|..+..+.|....|+++|+|+.+|+|+|+.|+++
T Consensus        88 ~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~  167 (242)
T d1cyda_          88 QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGP  167 (242)
T ss_dssp             BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             hhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHHHHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999986544 5789999999999999999999999999999999999999999


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +|||
T Consensus       168 ~gIr  171 (242)
T d1cyda_         168 HKIR  171 (242)
T ss_dssp             GTEE
T ss_pred             cCee
Confidence            9986

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-37  Score=217.24  Aligned_cols=162  Identities=27%  Similarity=0.377  Sum_probs=147.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||++|||+++|+.|+++|++|++++|+.++++++.+       ..++.+++||++++++++++++++.+++|+||++|||
T Consensus        17 Gas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~iD~lVnn   96 (257)
T d1xg5a_          17 GASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINN   96 (257)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEEC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEec
Confidence            899999999999999999999999999988776543       2478899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC--CCeEEEeccccccCC--CCCchhhhHhHHHHHHHH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK--KGKIINVGSVTVAAP--GPWAGTYTASKAALHSLT  149 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~isS~~~~~~--~~~~~~y~~sKaa~~~l~  149 (162)
                      ||....+++.+.+.++|+..+++|+.+++.+++.++|.|++.+  +|+||++||.++...  .+....|+++|+++.+|+
T Consensus        97 Ag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y~~sKaal~~lt  176 (257)
T d1xg5a_          97 AGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALT  176 (257)
T ss_dssp             CCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHHHHHHHHHHH
T ss_pred             ccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHHHHHHHHHHHhCH
Confidence            9998889999999999999999999999999999999987654  689999999988754  455677999999999999


Q ss_pred             HHHHHHh--ccCCCC
Q 042185          150 DTLRLEL--GHFGID  162 (162)
Q Consensus       150 ~~l~~e~--~~~gi~  162 (162)
                      |+|+.|+  +++|||
T Consensus       177 r~la~el~~~~~~I~  191 (257)
T d1xg5a_         177 EGLRQELREAQTHIR  191 (257)
T ss_dssp             HHHHHHHHHTTCCCE
T ss_pred             HHHHHHHHhCCCCEE
Confidence            9999998  788885

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-37  Score=222.99  Aligned_cols=161  Identities=27%  Similarity=0.393  Sum_probs=149.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc----------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ----------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVL   70 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~v   70 (162)
                      ||++|||+++|+.|+++|++|++++|+.+.++++.+          ..++.++.+|++|+++++++++++.+++|++|++
T Consensus        19 Gas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDiL   98 (297)
T d1yxma1          19 GGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFL   98 (297)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHHHhCCeEEE
Confidence            899999999999999999999999999887665432          3578899999999999999999999999999999


Q ss_pred             EECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           71 VNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      |||||.....++.+++.++|++.+++|+.++++++++++|.|.+++.++||++|| .+..+.|....|+++|+|+.+|+|
T Consensus        99 VnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~~~~~~~Y~asKaal~~ltk  177 (297)
T d1yxma1          99 VNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAVHSGAARAGVYNLTK  177 (297)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTCCTTCHHHHHHHHHHHHHHH
T ss_pred             EeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccc-cccccccccccchhHHHHHHHHHH
Confidence            9999998889999999999999999999999999999999999988899998866 456678899999999999999999


Q ss_pred             HHHHHhccCCCC
Q 042185          151 TLRLELGHFGID  162 (162)
Q Consensus       151 ~l~~e~~~~gi~  162 (162)
                      +++.|++++|||
T Consensus       178 ~lA~el~~~gIr  189 (297)
T d1yxma1         178 SLALEWACSGIR  189 (297)
T ss_dssp             HHHHHTGGGTEE
T ss_pred             HHHHHhcccCce
Confidence            999999999986

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=5.5e-37  Score=218.48  Aligned_cols=160  Identities=29%  Similarity=0.390  Sum_probs=144.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC--CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||+++|+.|+++|++|++++|+.+.++++..+  .++..+.+|++++++++++++++.+++|++|++|||||...
T Consensus        12 Gas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idilvnnAG~~~   91 (276)
T d1bdba_          12 GGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWD   91 (276)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccccccccccC
Confidence            8999999999999999999999999999988876553  57889999999999999999999999999999999999754


Q ss_pred             CC-----CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           79 VG-----PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        79 ~~-----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      ..     ...+.+.+.|++.+++|+.+++.++|+++|.|++++ |+||+++|..+..+.+..+.|+++|+|+.+|+|+|+
T Consensus        92 ~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~~~~~Y~asKaal~~ltr~lA  170 (276)
T d1bdba_          92 YSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELA  170 (276)
T ss_dssp             TTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTSSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCCCCchHHHHHHHHHHHHHHHH
Confidence            43     234455668999999999999999999999998664 899999999999999999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|+++. ||
T Consensus       171 ~ela~~-Ir  178 (276)
T d1bdba_         171 FELAPY-VR  178 (276)
T ss_dssp             HHHTTT-CE
T ss_pred             HHhhcc-eE
Confidence            999975 75

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=1.3e-36  Score=214.89  Aligned_cols=162  Identities=28%  Similarity=0.353  Sum_probs=145.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|++++|+.+.+++..+      ..++.++.+|++++++++++++++.+++|++|++||||
T Consensus        16 Gas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA   95 (260)
T d1h5qa_          16 GGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANA   95 (260)
T ss_dssp             TTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCCCcEecccc
Confidence            899999999999999999999999999877665432      36788999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-CCCeEEEeccccccC-------CCCCchhhhHhHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKIINVGSVTVAA-------PGPWAGTYTASKAALH  146 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~-------~~~~~~~y~~sKaa~~  146 (162)
                      |.....++.+.+.++|++.+++|+.+++.+++.+.|.|.++ ..+.|++++|.....       +.++...|+++|+|+.
T Consensus        96 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~~~Y~asKaal~  175 (260)
T d1h5qa_          96 GVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACS  175 (260)
T ss_dssp             CCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHHHHHHHHH
T ss_pred             cccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCccccchhhhhhhHH
Confidence            99888999999999999999999999999999999998654 567777777765543       3357789999999999


Q ss_pred             HHHHHHHHHhccCCCC
Q 042185          147 SLTDTLRLELGHFGID  162 (162)
Q Consensus       147 ~l~~~l~~e~~~~gi~  162 (162)
                      +|+|+++.|++++|||
T Consensus       176 ~lt~~lA~el~~~gIr  191 (260)
T d1h5qa_         176 NLVKGLAAEWASAGIR  191 (260)
T ss_dssp             HHHHHHHHHHGGGTEE
T ss_pred             HHHHHHHHHhchhCeE
Confidence            9999999999999986

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-36  Score=213.28  Aligned_cols=154  Identities=25%  Similarity=0.357  Sum_probs=140.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||++|||+++|+.|+++|++|++++|+.+.+++...       ..++.++.+|++++++++++++++.+++|++|++|||
T Consensus        10 Gas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnn   89 (254)
T d2gdza1          10 GAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNN   89 (254)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCCcCeeccc
Confidence            899999999999999999999999999887665432       2468899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC---CCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK---KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      ||....        ++|++.+++|+.+++.+++.++|+|.+++   +|+||++||..+..+.+..+.|+++|+|+.+|+|
T Consensus        90 Ag~~~~--------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltr  161 (254)
T d2gdza1          90 AGVNNE--------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTR  161 (254)
T ss_dssp             CCCCCS--------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             cccccc--------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHHHHHHHHHHH
Confidence            998533        45899999999999999999999997654   4789999999999999999999999999999999


Q ss_pred             H--HHHHhccCCCC
Q 042185          151 T--LRLELGHFGID  162 (162)
Q Consensus       151 ~--l~~e~~~~gi~  162 (162)
                      +  |+.|++++|||
T Consensus       162 s~ala~e~~~~gIr  175 (254)
T d2gdza1         162 SAALAANLMNSGVR  175 (254)
T ss_dssp             HHHHHHHHHTCCEE
T ss_pred             HHHHHHHhcCCCEE
Confidence            7  78899999986

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=4.2e-36  Score=209.28  Aligned_cols=152  Identities=23%  Similarity=0.358  Sum_probs=140.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||++|||+++|+.|+++|++|++++|+++.+++.    ...++.+|+++.      ++.+.++++++|++|||||.....
T Consensus        11 Gas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~----~~~~~~~Dv~~~------~~~~~~~~g~iD~lVnnAG~~~~~   80 (234)
T d1o5ia_          11 AASRGIGRAVADVLSQEGAEVTICARNEELLKRS----GHRYVVCDLRKD------LDLLFEKVKEVDILVLNAGGPKAG   80 (234)
T ss_dssp             SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT----CSEEEECCTTTC------HHHHHHHSCCCSEEEECCCCCCCB
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc----CCcEEEcchHHH------HHHHHHHhCCCcEEEecccccCCc
Confidence            8999999999999999999999999998877665    345778999764      455667889999999999998888


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccCC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFG  160 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~g  160 (162)
                      ++.+++.++|++.+++|+.+++.++|+++|.|++++.|+||+++|..+..+.+....|+++|+|+.+|+|+++.|++++|
T Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~g  160 (234)
T d1o5ia_          81 FFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYG  160 (234)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             chhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHhcccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CC
Q 042185          161 ID  162 (162)
Q Consensus       161 i~  162 (162)
                      ||
T Consensus       161 Ir  162 (234)
T d1o5ia_         161 IT  162 (234)
T ss_dssp             EE
T ss_pred             eE
Confidence            86

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-36  Score=215.93  Aligned_cols=160  Identities=33%  Similarity=0.461  Sum_probs=143.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEE---ecChhhHH---hhh-----cCCceeEEEeccCChHHHHHHHHHHHHHcCCccE
Q 042185            1 CSQGGIGHALARAFAASDCRVVAT---GRSKATMA---DLE-----QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDV   69 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~---~r~~~~~~---~~~-----~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~   69 (162)
                      ||++|||+++|+.|+++|++|+.+   .|+.+..+   +..     ...++.++.||++|+++++.+++++.+  +.+|+
T Consensus         9 GassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~--g~idi   86 (285)
T d1jtva_           9 GCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE--GRVDV   86 (285)
T ss_dssp             CCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT--SCCSE
T ss_pred             cCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc--cchhh
Confidence            899999999999999999976554   45443322   221     236789999999999999999998754  89999


Q ss_pred             EEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHH
Q 042185           70 LVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLT  149 (162)
Q Consensus        70 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~  149 (162)
                      +|||+|....+++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.|....|++||+|+.+|+
T Consensus        87 lvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~asKaal~~l~  166 (285)
T d1jtva_          87 LVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLC  166 (285)
T ss_dssp             EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred             hhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHHHHHHHHHH
Confidence            99999999889999999999999999999999999999999999998999999999999999999999999999999999


Q ss_pred             HHHHHHhccCCCC
Q 042185          150 DTLRLELGHFGID  162 (162)
Q Consensus       150 ~~l~~e~~~~gi~  162 (162)
                      ++|+.|++++|||
T Consensus       167 ~~la~El~~~gIr  179 (285)
T d1jtva_         167 ESLAVLLLPFGVH  179 (285)
T ss_dssp             HHHHHHHGGGTEE
T ss_pred             HHHHHHhhccCcE
Confidence            9999999999986

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-35  Score=207.76  Aligned_cols=158  Identities=28%  Similarity=0.409  Sum_probs=146.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||++|||+++|+.|+++|++|++++|++++++++.++..+....+|+++.+.++..    .+.++++|++|||+|....+
T Consensus        13 Gas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~----~~~~~~id~lVn~ag~~~~~   88 (245)
T d2ag5a1          13 AAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQF----ANEVERLDVLFNVAGFVHHG   88 (245)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHH----HHHCSCCSEEEECCCCCCCB
T ss_pred             CCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeecccccccccc----ccccccceeEEecccccCCC
Confidence            89999999999999999999999999999999998888899999999876655544    55668999999999998889


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccccc-CCCCCchhhhHhHHHHHHHHHHHHHHhccC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVA-APGPWAGTYTASKAALHSLTDTLRLELGHF  159 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~  159 (162)
                      ++.+.+.++|++.+++|+.+++.+++.+.|.|.+++.|+||+++|..+. .+.+....|+++|+|+++|+|+|+.|++++
T Consensus        89 ~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKaal~~l~r~lA~e~~~~  168 (245)
T d2ag5a1          89 TVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQ  168 (245)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             ChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHHHHHHHHHHHHHHhhhh
Confidence            9999999999999999999999999999999999999999999998764 678899999999999999999999999999


Q ss_pred             CCC
Q 042185          160 GID  162 (162)
Q Consensus       160 gi~  162 (162)
                      |||
T Consensus       169 gIr  171 (245)
T d2ag5a1         169 GIR  171 (245)
T ss_dssp             TEE
T ss_pred             CcE
Confidence            986

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=3.3e-36  Score=210.56  Aligned_cols=159  Identities=25%  Similarity=0.346  Sum_probs=140.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC--CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||+++|+.|+++|++|++++|+.+.+++...+  .++.++++|++++++++++++++.+++|++|++|||||...
T Consensus        12 Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiLinnAg~~~   91 (241)
T d2a4ka1          12 GAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAH   91 (241)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTT
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEecccccccc
Confidence            8999999999999999999999999999988777654  56788999999999999999999999999999999999988


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhcc
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGH  158 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~  158 (162)
                      ..++.+.+.++|++++++|+.+++.++|++.|+|++  .+.++++|| .+..+.|....|+++|+|+++|+|+|++|+++
T Consensus        92 ~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~--~~~i~~~ss-~a~~~~~~~~~Y~~sK~al~~lt~~lA~el~~  168 (241)
T d2a4ka1          92 SALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE--GGSLVLTGS-VAGLGAFGLAHYAAGKLGVVGLARTLALELAR  168 (241)
T ss_dssp             TTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT--TCEEEEECC-CTTCCHHHHHHHHHCSSHHHHHHHHHHHHHTT
T ss_pred             ccchhhhhcccccccccccccccccccccccccccc--ccceeeccc-cccccccCccccchhhHHHHHHHHHHHHHHhH
Confidence            899999999999999999999999999999998854  345555555 45556688999999999999999999999999


Q ss_pred             CCCC
Q 042185          159 FGID  162 (162)
Q Consensus       159 ~gi~  162 (162)
                      +|||
T Consensus       169 ~gIr  172 (241)
T d2a4ka1         169 KGVR  172 (241)
T ss_dssp             TTCE
T ss_pred             hCCE
Confidence            9996

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=7.7e-36  Score=210.12  Aligned_cols=154  Identities=23%  Similarity=0.295  Sum_probs=138.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhh------cCCceeEEEeccC-ChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLE------QDPRFFVQELDVL-SEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~------~~~~~~~~~~D~~-~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||++|||+++|++|+++|++|++++|+.+..+.+.      .+.++.++.+|++ +.++++++++++.+++|+||++|+|
T Consensus        12 Ggs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~iDilvnn   91 (254)
T d1sbya1          12 AALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILING   91 (254)
T ss_dssp             TTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             cCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcCCCCEEEeC
Confidence            89999999999999999999999988765443332      2467889999998 6678999999999999999999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc---CCCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR---KKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      ||..        +.+.|++++++|+.+++.++++++|.|.++   +.|+||++||..+..+.+++..|+++|+|+.+|++
T Consensus        92 AG~~--------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~~t~  163 (254)
T d1sbya1          92 AGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTN  163 (254)
T ss_dssp             CCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCC--------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHHHHHHHHHHHHHH
Confidence            9963        457899999999999999999999999765   35899999999999999999999999999999999


Q ss_pred             HHHHHhccCCCC
Q 042185          151 TLRLELGHFGID  162 (162)
Q Consensus       151 ~l~~e~~~~gi~  162 (162)
                      +|+.|++++|||
T Consensus       164 ~la~el~~~gIr  175 (254)
T d1sbya1         164 SLAKLAPITGVT  175 (254)
T ss_dssp             HHHHHHHHHSEE
T ss_pred             HHHhhccccCeE
Confidence            999999999986

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.4e-35  Score=208.00  Aligned_cols=160  Identities=18%  Similarity=0.235  Sum_probs=143.7

Q ss_pred             CCCC--chHHHHHHHHHHCCCeEEEEecChhhHHhhh----cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQG--GIGHALARAFAASDCRVVATGRSKATMADLE----QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~--giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~----~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+|  |||+++|++|+++|++|++.+|+++..++..    ......++++|++|+++++++++++.+++|++|++|||+
T Consensus        15 Gas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilVnna   94 (256)
T d1ulua_          15 GVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAI   94 (256)
T ss_dssp             SCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECC
T ss_pred             CCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCCceEEEecc
Confidence            6665  9999999999999999999999876544332    245678899999999999999999999999999999999


Q ss_pred             CCCCC----CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           75 GVQCV----GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        75 g~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      |....    .++.+.+.++|+..+++|+.+++.+++++.|.|++  +|+||++||..+..+.|....|+++|+|+.+|+|
T Consensus        95 g~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltr  172 (256)
T d1ulua_          95 AFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNVMAIAKAALEASVR  172 (256)
T ss_dssp             CCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHH
T ss_pred             ccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc--CCEEEEEeehHhcCCCCCchHHHHHHHHHHHHHH
Confidence            98543    45678899999999999999999999999999854  4899999999999999999999999999999999


Q ss_pred             HHHHHhccCCCC
Q 042185          151 TLRLELGHFGID  162 (162)
Q Consensus       151 ~l~~e~~~~gi~  162 (162)
                      +++.||+++|||
T Consensus       173 ~lA~ela~~gIr  184 (256)
T d1ulua_         173 YLAYELGPKGVR  184 (256)
T ss_dssp             HHHHHHGGGTCE
T ss_pred             HHHHHhcccCCE
Confidence            999999999996

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=3.7e-35  Score=207.38  Aligned_cols=160  Identities=21%  Similarity=0.321  Sum_probs=142.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEec-ChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGR-SKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r-~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|+.|+++|++|+++++ +.+.++++.+     ..++.++.+|++|+++++.+++++.+++|+||++||||
T Consensus        13 Gas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilinna   92 (259)
T d1ja9a_          13 GAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNS   92 (259)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEEEECCC
T ss_pred             CCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCCCcEEEecc
Confidence            89999999999999999999998755 4444444322     36789999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccc-cCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTV-AAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~-~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      |.....++.+.+.++|++.+++|+.++++++|.++|.|++  .+++++++|..+ ..+.+....|+++|+|+.+|+|+|+
T Consensus        93 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~~iii~s~~~~~~~~~~~~~Y~asK~al~~l~r~lA  170 (259)
T d1ja9a_          93 GMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR--GGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFA  170 (259)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE--EEEEEEECCGGGTCCSCCSCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhc--CCcccccccccccccCCCCchhHHHHHHHHHHHHHHHH
Confidence            9988899999999999999999999999999999999964  357777766555 5578999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       171 ~e~~~~gIr  179 (259)
T d1ja9a_         171 VDCGAKGVT  179 (259)
T ss_dssp             HHHGGGTCE
T ss_pred             HHHhhcCeE
Confidence            999999996

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=5.4e-35  Score=205.34  Aligned_cols=162  Identities=23%  Similarity=0.331  Sum_probs=142.8

Q ss_pred             CCCCchHHHHHHHHH---HCCCeEEEEecChhhHHhhh----cCCceeEEEeccCChHHHHHHHHHHHH--HcCCccEEE
Q 042185            1 CSQGGIGHALARAFA---ASDCRVVATGRSKATMADLE----QDPRFFVQELDVLSEQSVQNVLSNVLE--KFGKIDVLV   71 (162)
Q Consensus         1 Ga~~giG~~ia~~l~---~~g~~vi~~~r~~~~~~~~~----~~~~~~~~~~D~~~~~~i~~~~~~~~~--~~~~id~vi   71 (162)
                      ||++|||+++|+.|+   ++|++|++++|+.+.+++++    ...++.++.||++|+++++++++++.+  .++++|++|
T Consensus         9 Gas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~iDiLv   88 (248)
T d1snya_           9 GCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLF   88 (248)
T ss_dssp             CCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEE
T ss_pred             CCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcCCcceEE
Confidence            899999999999996   47999999999988766553    247899999999999999999999854  678999999


Q ss_pred             ECCCCCCC-CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-----------CCCeEEEeccccccC---CCCCch
Q 042185           72 NNAGVQCV-GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-----------KKGKIINVGSVTVAA---PGPWAG  136 (162)
Q Consensus        72 ~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~~~iv~isS~~~~~---~~~~~~  136 (162)
                      ||||+... .++.+.+.++|++++++|+.+++.+++.++|+|+++           ..|++|+++|..+..   +.++..
T Consensus        89 nNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~~~~~~~~  168 (248)
T d1snya_          89 NNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMY  168 (248)
T ss_dssp             ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCCSCCCH
T ss_pred             eeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCCCCCCChH
Confidence            99998644 467789999999999999999999999999999764           368999999988764   456678


Q ss_pred             hhhHhHHHHHHHHHHHHHHhccCCCC
Q 042185          137 TYTASKAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       137 ~y~~sKaa~~~l~~~l~~e~~~~gi~  162 (162)
                      .|++||+|+.+|+++++.|++++|||
T Consensus       169 ~Y~aSKaal~~lt~~la~e~~~~gI~  194 (248)
T d1snya_         169 AYRTSKSALNAATKSLSVDLYPQRIM  194 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCeE
Confidence            99999999999999999999999986

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.4e-35  Score=207.54  Aligned_cols=160  Identities=24%  Similarity=0.273  Sum_probs=143.3

Q ss_pred             CCCCchHHHHHHHHHH---CCCeEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHH----cCC
Q 042185            1 CSQGGIGHALARAFAA---SDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEK----FGK   66 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~---~g~~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~----~~~   66 (162)
                      ||++|||+++|++|++   +|++|++++|+.+.++++.+       +.++.++.||++++++++++++.+.+.    ++.
T Consensus        13 Gas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~~~~~~~   92 (259)
T d1oaaa_          13 GASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQ   92 (259)
T ss_dssp             SCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCCCTTCC
T ss_pred             CCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhhhhccCc
Confidence            8999999999999986   79999999999988877643       357889999999999999999998773    457


Q ss_pred             ccEEEECCCCCC---CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC--CCeEEEeccccccCCCCCchhhhHh
Q 042185           67 IDVLVNNAGVQC---VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK--KGKIINVGSVTVAAPGPWAGTYTAS  141 (162)
Q Consensus        67 id~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~y~~s  141 (162)
                      +|++|+|+|...   .+++.+.+.++|++++++|+.+++.++|.++|+|++++  .|+||++||..+..+.+++..|+++
T Consensus        93 ~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~as  172 (259)
T d1oaaa_          93 RLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAG  172 (259)
T ss_dssp             EEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             eEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCCCccchHHHHH
Confidence            899999999753   35678899999999999999999999999999998765  5799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCCC
Q 042185          142 KAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       142 Kaa~~~l~~~l~~e~~~~gi~  162 (162)
                      |+|+.+|+|+|+.|  ..|||
T Consensus       173 Kaal~~lt~~la~e--~~gIr  191 (259)
T d1oaaa_         173 KAARDMLYQVLAAE--EPSVR  191 (259)
T ss_dssp             HHHHHHHHHHHHHH--CTTEE
T ss_pred             HHHHHHHHHHHHhC--CCCCE
Confidence            99999999999998  56775

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.9e-35  Score=206.17  Aligned_cols=161  Identities=21%  Similarity=0.259  Sum_probs=149.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|++++|+.+.++++.+      ........+|+++.+.++..++.+.+.++.+|++++|+
T Consensus        21 GassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~li~na  100 (269)
T d1xu9a_          21 GASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNH  100 (269)
T ss_dssp             SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECC
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCCcccccccc
Confidence            899999999999999999999999999998887644      36778899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRL  154 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~  154 (162)
                      |.....++.+.+.++|++++++|+.+++.+++.++|.|++ ++|+||++||.++..+.|....|++||+|+.+|+++|+.
T Consensus       101 g~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~-~~G~ii~isS~~~~~~~p~~~~Y~asKaal~~~~~~La~  179 (269)
T d1xu9a_         101 ITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQ-SNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRK  179 (269)
T ss_dssp             CCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHh-cCCcceEeccchhcCCCCCchHHHHHHHHHHHHHHHHHH
Confidence            9988888999999999999999999999999999999964 469999999999999999999999999999999999999


Q ss_pred             HhccC--CCC
Q 042185          155 ELGHF--GID  162 (162)
Q Consensus       155 e~~~~--gi~  162 (162)
                      |++++  |||
T Consensus       180 El~~~~~~I~  189 (269)
T d1xu9a_         180 EYSVSRVNVS  189 (269)
T ss_dssp             HHHHHTCCCE
T ss_pred             HhhhcCCCEE
Confidence            99854  453

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-35  Score=208.00  Aligned_cols=157  Identities=25%  Similarity=0.304  Sum_probs=138.8

Q ss_pred             CCCCchHHHHHHHHHHC-CCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAAS-DCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~-g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++ |++|++++|+.++++++.+     ..++.++.||++|.++++++++++.+++|+||++||||
T Consensus        10 Gas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iDiLVnNA   89 (275)
T d1wmaa1          10 GGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNA   89 (275)
T ss_dssp             SCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECC
T ss_pred             CCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence            89999999999999986 8999999999988776543     35788999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC-----------------------
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP-----------------------  131 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------------------  131 (162)
                      |+....+..+.+.++|+..+++|+++++.+++.++|.|++  .|+||++||..+..+                       
T Consensus        90 Gi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~~~~~~  167 (275)
T d1wmaa1          90 GIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELV  167 (275)
T ss_dssp             CCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHH
T ss_pred             CcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcccccccceeccccccchhhhhhhcccccchhhhc
Confidence            9988888888899999999999999999999999999954  489999999765321                       


Q ss_pred             ------------------CCCchhhhHhHHHHHHHHHHHHHHhccC
Q 042185          132 ------------------GPWAGTYTASKAALHSLTDTLRLELGHF  159 (162)
Q Consensus       132 ------------------~~~~~~y~~sKaa~~~l~~~l~~e~~~~  159 (162)
                                        ..+...|++||+++.+|++.+++||+++
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~  213 (275)
T d1wmaa1         168 GLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQ  213 (275)
T ss_dssp             HHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                              2234569999999999999999998763

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=5.5e-34  Score=202.61  Aligned_cols=160  Identities=19%  Similarity=0.390  Sum_probs=143.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh-hhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK-ATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~-~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|+.|+++|++|++++|+. +.++++.+     ...+.++.+|++++++++++++++.+.+|++|++|+|+
T Consensus        25 Gas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilV~na  104 (272)
T d1g0oa_          25 GAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNS  104 (272)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             CCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCCCCcccccc
Confidence            8999999999999999999999998874 44443322     46789999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccccc-CCCCCchhhhHhHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVA-APGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      |.....++.+.+.++|++.+++|+.+++.+++++.|.|.+  .+++++++|..+. .+.+....|+++|+|+.+|+|+++
T Consensus       105 g~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~--~g~~i~i~s~~~~~~~~~~~~~Y~asKaal~~ltk~lA  182 (272)
T d1g0oa_         105 GVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI--GGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMA  182 (272)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT--TCEEEEECCGGGTCSSCSSCHHHHHHHHHHHHHHHHHH
T ss_pred             ccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccc--ccccccccccccccccccchhhHHHHHHHHHHHHHHHH
Confidence            9988899999999999999999999999999999999964  4788888877654 467778889999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .||+++|||
T Consensus       183 ~e~~~~gIr  191 (272)
T d1g0oa_         183 IDMADKKIT  191 (272)
T ss_dssp             HHHGGGTCE
T ss_pred             HHhchhCeE
Confidence            999999997

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.8e-33  Score=197.69  Aligned_cols=162  Identities=24%  Similarity=0.321  Sum_probs=141.6

Q ss_pred             CCCCchHHHHHHHHHHCCC--eEEEEecChhhHHhhhcC--CceeEEEeccCChHHHHHHHHHHHHHcCC--ccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDC--RVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLEKFGK--IDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~--~vi~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~--id~vi~~a   74 (162)
                      ||++|||+++|++|+++|+  +|++++|+.++++++.+.  .++.++.+|+++.++++++++++.+.++.  +|++||||
T Consensus        10 GassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~idilinnA   89 (250)
T d1yo6a1          10 GANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNA   89 (250)
T ss_dssp             SCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECC
T ss_pred             CCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCeEEEEEcC
Confidence            8999999999999999996  689999999888877653  57899999999999999999999998764  99999999


Q ss_pred             CCCC-CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-----------CCeEEEeccccccCC-------CCCc
Q 042185           75 GVQC-VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-----------KGKIINVGSVTVAAP-------GPWA  135 (162)
Q Consensus        75 g~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----------~~~iv~isS~~~~~~-------~~~~  135 (162)
                      |+.. ..++.+.+.++|++.+++|+.+++.+++.++|+|++++           .+.++++++.....+       ..+.
T Consensus        90 G~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~  169 (250)
T d1yo6a1          90 GVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPV  169 (250)
T ss_dssp             CCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCSTTSSSCB
T ss_pred             cccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCCcccccchhH
Confidence            9754 46788899999999999999999999999999997642           378898887655432       2345


Q ss_pred             hhhhHhHHHHHHHHHHHHHHhccCCCC
Q 042185          136 GTYTASKAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       136 ~~y~~sKaa~~~l~~~l~~e~~~~gi~  162 (162)
                      ..|++||+|+.+|++.|+.|++++|||
T Consensus       170 ~aY~aSKaal~~l~~~la~el~~~gI~  196 (250)
T d1yo6a1         170 LAYRMSKAAINMFGRTLAVDLKDDNVL  196 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTCE
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCeE
Confidence            679999999999999999999999986

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-32  Score=190.97  Aligned_cols=162  Identities=25%  Similarity=0.345  Sum_probs=147.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||++|||+++|++|+++|++|++++|+.+.+++..+  ........+|+.+.++++.....+......+|.++++++...
T Consensus        12 Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (248)
T d2o23a1          12 GGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAV   91 (248)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCccccccccccccccccccccccccccccccccccccccc
Confidence            899999999999999999999999999988877655  367888999999999999999999999999999999987643


Q ss_pred             C------CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc------CCCeEEEeccccccCCCCCchhhhHhHHHHH
Q 042185           79 V------GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR------KKGKIINVGSVTVAAPGPWAGTYTASKAALH  146 (162)
Q Consensus        79 ~------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~  146 (162)
                      .      .++.+.+.++|++.+++|+.+++++++++.|.|..+      ++|+||++||..+..+.|+...|+++|+|+.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~  171 (248)
T d2o23a1          92 ASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIV  171 (248)
T ss_dssp             CCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred             CCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCchHHHHHHHHHH
Confidence            3      356677899999999999999999999999998643      5689999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCCC
Q 042185          147 SLTDTLRLELGHFGID  162 (162)
Q Consensus       147 ~l~~~l~~e~~~~gi~  162 (162)
                      +|+|+|+.|++++|||
T Consensus       172 ~lt~~la~e~~~~gIr  187 (248)
T d2o23a1         172 GMTLPIARDLAPIGIR  187 (248)
T ss_dssp             HHHHHHHHHHGGGTEE
T ss_pred             HHHHHHHHHhcccCcc
Confidence            9999999999999986

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=4e-32  Score=194.89  Aligned_cols=162  Identities=15%  Similarity=0.289  Sum_probs=147.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||++|||+++|++|+++|++|++++|+.+++++..+      .....++.+|+++.++++.+++.+.++++++|++|||+
T Consensus        32 Gas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilvnnA  111 (294)
T d1w6ua_          32 GGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNA  111 (294)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECC
T ss_pred             CCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccccchhhhhh
Confidence            899999999999999999999999999887665433      36788999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhh-cCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY-RKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLR  153 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~  153 (162)
                      |.....++...+.++|+..+.+|..+.+.+.+...+.+.. +..+.+++++|..+..+.+....|+++|+|+.+|+|.++
T Consensus       112 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~YsasKaal~~ltk~lA  191 (294)
T d1w6ua_         112 AGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLA  191 (294)
T ss_dssp             CCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             hhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHHHHHHHHHHHHHHH
Confidence            9988889999999999999999999999998888776654 456778888988889999999999999999999999999


Q ss_pred             HHhccCCCC
Q 042185          154 LELGHFGID  162 (162)
Q Consensus       154 ~e~~~~gi~  162 (162)
                      .|++++|||
T Consensus       192 ~ela~~gIr  200 (294)
T d1w6ua_         192 AEWGKYGMR  200 (294)
T ss_dssp             HHHGGGTEE
T ss_pred             HHHhHhCeE
Confidence            999999986

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.97  E-value=4.3e-31  Score=188.40  Aligned_cols=162  Identities=24%  Similarity=0.246  Sum_probs=130.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh-hhHHhhhc------CC-----------------ceeEEEeccCChHHHHHH
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK-ATMADLEQ------DP-----------------RFFVQELDVLSEQSVQNV   56 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~-~~~~~~~~------~~-----------------~~~~~~~D~~~~~~i~~~   56 (162)
                      ||++|||+++|++|+++|++|++++++. +..+++..      ..                 ......+|+++.++++++
T Consensus         9 Gas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~~v~~~   88 (284)
T d1e7wa_           9 GAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAEL   88 (284)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHHHHHHH
Confidence            8999999999999999999999987754 33333221      12                 233456779999999999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCChHHHH--------------HHHHhhhhhHHHHHHHHHHhHh------hcC
Q 042185           57 LSNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAME--------------QTFNTNVFGPMRLVQAVVPHMA------YRK  116 (162)
Q Consensus        57 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~--------------~~~~~n~~~~~~~~~~~~~~~~------~~~  116 (162)
                      ++++.+++|+||++|||||.....++.+.+.++|+              ..+.+|+.+++++.+.+.+.+.      +..
T Consensus        89 ~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~  168 (284)
T d1e7wa_          89 VAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGT  168 (284)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCS
T ss_pred             HHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHHHhcCC
Confidence            99999999999999999999888888777766654              4789999999999999877643      344


Q ss_pred             CCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhccCCCC
Q 042185          117 KGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       117 ~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~~~gi~  162 (162)
                      .++||+++|.....+.++...|+++|+|+.+|+|+++.||+++|||
T Consensus       169 ~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIr  214 (284)
T d1e7wa_         169 NYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIR  214 (284)
T ss_dssp             CEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             CCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCcccc
Confidence            6789999999999999999999999999999999999999999986

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.97  E-value=6.9e-32  Score=187.99  Aligned_cols=155  Identities=17%  Similarity=0.166  Sum_probs=132.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHH--HcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLE--KFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~--~~~~id~vi~~ag~~~   78 (162)
                      ||++|||+++|++|+++|++|++++|+++...     .......+|+++.++.....+.+.+  ++++||++|||||...
T Consensus         9 Gas~GIG~aia~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linnAG~~~   83 (235)
T d1ooea_           9 GGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWA   83 (235)
T ss_dssp             TTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCchhcc-----cccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEECCcccc
Confidence            89999999999999999999999999865321     2345566788888777777777766  4589999999999765


Q ss_pred             C-CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhc
Q 042185           79 V-GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus        79 ~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                      . .++.+.+.+.|+.++++|+.+++.++++++|+|++  +|+||++||..+..+.+++..|+++|+|+.+|+++|+.|++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  161 (235)
T d1ooea_          84 GGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDS  161 (235)
T ss_dssp             CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHHSTTS
T ss_pred             cccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc--ceEEEEeccHHhcCCcccccchHHHHHHHHHHHHHHHHHhc
Confidence            4 45556667899999999999999999999999954  48999999999999999999999999999999999999998


Q ss_pred             c--CCCC
Q 042185          158 H--FGID  162 (162)
Q Consensus       158 ~--~gi~  162 (162)
                      .  .|||
T Consensus       162 ~~~~~i~  168 (235)
T d1ooea_         162 GLPDNSA  168 (235)
T ss_dssp             SCCTTCE
T ss_pred             cCCCceE
Confidence            4  5553

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=2e-31  Score=185.73  Aligned_cols=155  Identities=15%  Similarity=0.185  Sum_probs=134.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcC--CccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFG--KIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--~id~vi~~ag~~~   78 (162)
                      ||++|||+++|+.|+++|++|++++++.+..     ........+|.++.++.+.+...+.+.++  ++|++|||||...
T Consensus         9 Gas~GIG~a~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lInnAG~~~   83 (236)
T d1dhra_           9 GGRGALGSRCVQAFRARNWWVASIDVVENEE-----ASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWA   83 (236)
T ss_dssp             TTTSHHHHHHHHHHHTTTCEEEEEESSCCTT-----SSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-----ccccceeecccCcHHHHHHHHHHHHHHhCCCCceEEEECCcccc
Confidence            8999999999999999999999999876432     13345667788888888888888877654  7999999999754


Q ss_pred             C-CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHHHHHHhc
Q 042185           79 V-GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus        79 ~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                      . .++.+.+.++|++++++|+.+++.+++.++|+|++  +|+||++||.++..+.+....|++||+|+.+|+|+|+.|++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~la~El~  161 (236)
T d1dhra_          84 GGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNS  161 (236)
T ss_dssp             CBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHTSTTS
T ss_pred             cccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc--ccceeEEccHHHcCCccCCcccHHHHHHHHHHHHHHHHHhc
Confidence            4 45667778999999999999999999999999954  58999999999999999999999999999999999999998


Q ss_pred             --cCCCC
Q 042185          158 --HFGID  162 (162)
Q Consensus       158 --~~gi~  162 (162)
                        +.|||
T Consensus       162 ~~~~gI~  168 (236)
T d1dhra_         162 GMPSGAA  168 (236)
T ss_dssp             SCCTTCE
T ss_pred             cCCCcEE
Confidence              57885

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.97  E-value=1e-29  Score=184.80  Aligned_cols=159  Identities=18%  Similarity=0.257  Sum_probs=132.9

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----------------CCceeEE--------------------E
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----------------DPRFFVQ--------------------E   44 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----------------~~~~~~~--------------------~   44 (162)
                      +++|||+++|+.|+++|++|++++++.........                 .......                    .
T Consensus        12 ~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (329)
T d1uh5a_          12 DTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDIDEETKNNKR   91 (329)
T ss_dssp             SSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGGCCHHHHTSHH
T ss_pred             CCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcccchhhhhhhh
Confidence            56899999999999999999999887542221100                 0111222                    3


Q ss_pred             eccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC--CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEE
Q 042185           45 LDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV--GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIIN  122 (162)
Q Consensus        45 ~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~  122 (162)
                      +|+++.++++.+++.+.+.+|+||++|||+|....  +++.+++.++|++.+++|+++.+.++|++.|+|++  .|+||+
T Consensus        92 ~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~--~GsIv~  169 (329)
T d1uh5a_          92 YNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKP--QSSIIS  169 (329)
T ss_dssp             HHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEE
T ss_pred             hhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhccc--cccccc
Confidence            47778889999999999999999999999997643  57889999999999999999999999999999954  589999


Q ss_pred             eccccccCCCCC-chhhhHhHHHHHHHHHHHHHHhcc-CCCC
Q 042185          123 VGSVTVAAPGPW-AGTYTASKAALHSLTDTLRLELGH-FGID  162 (162)
Q Consensus       123 isS~~~~~~~~~-~~~y~~sKaa~~~l~~~l~~e~~~-~gi~  162 (162)
                      +||..+..+.|. ...|+++|+++++|+|+|+.||++ +|||
T Consensus       170 iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIR  211 (329)
T d1uh5a_         170 LTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIR  211 (329)
T ss_dssp             EECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred             ceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcE
Confidence            999999988876 567999999999999999999987 5986

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=2.8e-28  Score=171.66  Aligned_cols=160  Identities=14%  Similarity=0.173  Sum_probs=140.7

Q ss_pred             CCCC--chHHHHHHHHHHCCCeEEEEecChhhHHhhh----cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQG--GIGHALARAFAASDCRVVATGRSKATMADLE----QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~--giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~----~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+|  |||+++|+.|+++|++|++++|+++..+.+.    .........+|+++..++...+.++.+.++++|++|+|+
T Consensus        12 Gass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~a   91 (258)
T d1qsga_          12 GVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSI   91 (258)
T ss_dssp             CCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSEEEEEECC
T ss_pred             CCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcccccceEEEee
Confidence            7787  8999999999999999999999866444332    246778889999999999999999999999999999999


Q ss_pred             CCCCCCCC-----CCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHH
Q 042185           75 GVQCVGPL-----AEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLT  149 (162)
Q Consensus        75 g~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~  149 (162)
                      +......+     .....+.|...+.+|+.+.+.+.+.+.+.+.  +++.||++||..+..+.|....|+++|+|+.+|+
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Ii~iss~~~~~~~~~~~~Y~~sKaal~~lt  169 (258)
T d1qsga_          92 GFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN--PGSALLTLSYLGAERAIPNYNVMGLAKASLEANV  169 (258)
T ss_dssp             CCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEE--EEEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHH
T ss_pred             cccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCcEEEEecchhhccCCCCcHHHHHHHHHHHHHH
Confidence            88644333     3567788999999999999999999999884  3468999999999999999999999999999999


Q ss_pred             HHHHHHhccCCCC
Q 042185          150 DTLRLELGHFGID  162 (162)
Q Consensus       150 ~~l~~e~~~~gi~  162 (162)
                      |+++.|++++|||
T Consensus       170 r~lA~el~~~gIr  182 (258)
T d1qsga_         170 RYMANAMGPEGVR  182 (258)
T ss_dssp             HHHHHHHTTTTEE
T ss_pred             HHHHHHhCccCce
Confidence            9999999999986

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.96  E-value=3.8e-28  Score=169.22  Aligned_cols=154  Identities=26%  Similarity=0.327  Sum_probs=132.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC--
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC--   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~--   78 (162)
                      ||++|||+++|++|+++|++|++++|+.+.       .......+|+++......+.....+.. ..+..+.+++...  
T Consensus         8 Gas~GIG~aiA~~la~~Ga~V~i~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   79 (241)
T d1uaya_           8 GGASGLGRAAALALKARGYRVVVLDLRREG-------EDLIYVEGDVTREEDVRRAVARAQEEA-PLFAVVSAAGVGLAE   79 (241)
T ss_dssp             TTTSHHHHHHHHHHHHHTCEEEEEESSCCS-------SSSEEEECCTTCHHHHHHHHHHHHHHS-CEEEEEECCCCCCCC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCccc-------ccceEeeccccchhhhHHHHHhhhccc-cccchhhhhhccccc
Confidence            899999999999999999999999998653       456778899999999999988887765 4455555555432  


Q ss_pred             --CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhH------hhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           79 --VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHM------AYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        79 --~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~------~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                        .......+.+.|++.+++|+.+.+.+++.+.+.+      .+++.|+||++||..+..+.++...|+++|+|+.+|+|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~  159 (241)
T d1uaya_          80 KILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTL  159 (241)
T ss_dssp             CSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHH
T ss_pred             cccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhhHHHHHHHHHHHH
Confidence              2455667889999999999999999999999884      44567999999999999999999999999999999999


Q ss_pred             HHHHHhccCCCC
Q 042185          151 TLRLELGHFGID  162 (162)
Q Consensus       151 ~l~~e~~~~gi~  162 (162)
                      +++.|++++|||
T Consensus       160 ~lA~ela~~gIr  171 (241)
T d1uaya_         160 PAARELAGWGIR  171 (241)
T ss_dssp             HHHHHHGGGTEE
T ss_pred             HHHHHHhhcCCc
Confidence            999999999986

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.95  E-value=3.8e-28  Score=171.10  Aligned_cols=150  Identities=21%  Similarity=0.279  Sum_probs=129.5

Q ss_pred             CCCCchHHHHHHHHHHCCC-eEEEEecChhhH---Hh----hh-cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEE
Q 042185            1 CSQGGIGHALARAFAASDC-RVVATGRSKATM---AD----LE-QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLV   71 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-~vi~~~r~~~~~---~~----~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi   71 (162)
                      ||++|||+++|++|+++|+ +|++++|+.+..   ++    +. ...++.++.||++|.++++.+++.+.+. +++|.+|
T Consensus        16 Ggs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~-~~i~~vv   94 (259)
T d2fr1a1          16 GGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD-VPLSAVF   94 (259)
T ss_dssp             TTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT-SCEEEEE
T ss_pred             CCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc-ccccccc
Confidence            8999999999999999999 689999974332   22    21 2467899999999999999999988654 6899999


Q ss_pred             ECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHH
Q 042185           72 NNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDT  151 (162)
Q Consensus        72 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~  151 (162)
                      ||+|.....++.+.+.++|+..+++|+.+++.+.+.+    ...+.++||++||..+..+.+++..|+++|+++++|++.
T Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~~~~~iv~~SS~a~~~g~~~~~~YaAaka~l~~la~~  170 (259)
T d2fr1a1          95 HAAATLDDGTVDTLTGERIERASRAKVLGARNLHELT----RELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQ  170 (259)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTSCCSEEEEEEEHHHHTCCTTCTTTHHHHHHHHHHHHH
T ss_pred             cccccccccccccccHHHHHHHhhhhccchhHHHHHh----hccCCceEeeecchhhccCCcccHHHHHHHHhHHHHHHH
Confidence            9999998899999999999999999999999887764    445678999999999999999999999999999988776


Q ss_pred             HHHH
Q 042185          152 LRLE  155 (162)
Q Consensus       152 l~~e  155 (162)
                      ++.+
T Consensus       171 ~~~~  174 (259)
T d2fr1a1         171 RRSD  174 (259)
T ss_dssp             HHHT
T ss_pred             HHhC
Confidence            6543

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.95  E-value=9.5e-27  Score=164.25  Aligned_cols=162  Identities=25%  Similarity=0.298  Sum_probs=131.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhH-Hhhhc------CCceeEEEeccCC----hHHHHHHHHHHHHHcCCccE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATM-ADLEQ------DPRFFVQELDVLS----EQSVQNVLSNVLEKFGKIDV   69 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~-~~~~~------~~~~~~~~~D~~~----~~~i~~~~~~~~~~~~~id~   69 (162)
                      ||++|||+++|++|+++|++|++++|+.+.. +++.+      ........+|..+    .+.++++++.+.+++|++|+
T Consensus         8 Gas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iDi   87 (266)
T d1mxha_           8 GGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDV   87 (266)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHhCCCCE
Confidence            8999999999999999999999999986543 33222      3456666665543    56678888899999999999


Q ss_pred             EEECCCCCCCCCCC-----------CCChHHHHHHHHhhhhhHHHHHHHHHHhHhh-----cCCCeEEEeccccccCCCC
Q 042185           70 LVNNAGVQCVGPLA-----------EVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY-----RKKGKIINVGSVTVAAPGP  133 (162)
Q Consensus        70 vi~~ag~~~~~~~~-----------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~~~iv~isS~~~~~~~~  133 (162)
                      +|||||+..+.++.           +...+.+...+..|+.+.+...+...+.+..     ...+.++++++..+..+.|
T Consensus        88 lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (266)
T d1mxha_          88 LVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLP  167 (266)
T ss_dssp             EEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGGGSCCT
T ss_pred             EEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccccccCc
Confidence            99999987654433           2345667788899999999988888777643     2356888899999999999


Q ss_pred             CchhhhHhHHHHHHHHHHHHHHhccCCCC
Q 042185          134 WAGTYTASKAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       134 ~~~~y~~sKaa~~~l~~~l~~e~~~~gi~  162 (162)
                      +...|++||+++.+|+|+++.|++++|||
T Consensus       168 ~~~~Y~asKaal~~lt~~lA~e~~~~gIr  196 (266)
T d1mxha_         168 GFCVYTMAKHALGGLTRAAALELAPRHIR  196 (266)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             chhhhhhhHHHHhhhHHHHHHHhCccCcE
Confidence            99999999999999999999999999986

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.94  E-value=4.2e-26  Score=161.19  Aligned_cols=158  Identities=21%  Similarity=0.327  Sum_probs=134.3

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHh-hhc--CCceeEEEeccCChHHHHHHHHHHHHHc---CCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMAD-LEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKF---GKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~-~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~---~~id~vi~~ag   75 (162)
                      |++|||+++|++|+++|++|++++|+.+++.+ +.+  ..+...+.||++++++++.+++.+.+.+   +++|+++||+|
T Consensus        16 g~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~~~ld~~i~~ag   95 (268)
T d2h7ma1          16 TDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIG   95 (268)
T ss_dssp             STTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCC
T ss_pred             CCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccccCCCcceeeeccc
Confidence            45799999999999999999999999876533 433  3567788999999999999999997765   67999999999


Q ss_pred             CCCC-----CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           76 VQCV-----GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        76 ~~~~-----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      +...     .++.+.+.+.|.+.+.+|..+.+...+...+.+.   ++.+++++|.....+.|....|+++|+|+.+|+|
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~s~~~~~~~p~~~~y~~sK~a~~~ltr  172 (268)
T d2h7ma1          96 FMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMN---PGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNR  172 (268)
T ss_dssp             CCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEEEEECCCSSCCTTTHHHHHHHHHHHHHHH
T ss_pred             ccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcc---cccccccccccccccCcccchhhccccchhhccc
Confidence            7532     3566788999999999999999999998877653   2456667777788888999999999999999999


Q ss_pred             HHHHHhccCCCC
Q 042185          151 TLRLELGHFGID  162 (162)
Q Consensus       151 ~l~~e~~~~gi~  162 (162)
                      +++.|++++|||
T Consensus       173 ~lA~e~~~~gIr  184 (268)
T d2h7ma1         173 FVAREAGKYGVR  184 (268)
T ss_dssp             HHHHHHHTTTCE
T ss_pred             cchhhhhccCCc
Confidence            999999999996

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.94  E-value=1.3e-25  Score=159.16  Aligned_cols=160  Identities=18%  Similarity=0.247  Sum_probs=124.4

Q ss_pred             CCC--CchHHHHHHHHHHCCCeEEEEecChhhHHhh----hcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQ--GGIGHALARAFAASDCRVVATGRSKATMADL----EQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~--~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~----~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+  +|||+++|+.|+++|++|++++|+++..+.+    +......+..+|++++++++++++++.+.+|++|++|+|+
T Consensus        12 Gaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~id~lV~na   91 (274)
T d2pd4a1          12 GVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSV   91 (274)
T ss_dssp             CCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             CCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCCCCeEEeec
Confidence            554  4999999999999999999999986433322    2246778899999999999999999999999999999999


Q ss_pred             CCCCCC----CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           75 GVQCVG----PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        75 g~~~~~----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      |.....    .......+.+...+.++..+...+.+...+.+  +.++.|+++++.....+.+....|+++|+|+.+|+|
T Consensus        92 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~~~~~~~~~~~~~y~asK~al~~ltr  169 (274)
T d2pd4a1          92 AFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLL--NNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVR  169 (274)
T ss_dssp             CCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE--EEEEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccchhhhhhhcccccccccccccccccc--ccCcceeeecccccccccccchhhhHHHHHHHHHHH
Confidence            976443    23334455555555555555555555554433  234557777777778888888999999999999999


Q ss_pred             HHHHHhccCCCC
Q 042185          151 TLRLELGHFGID  162 (162)
Q Consensus       151 ~l~~e~~~~gi~  162 (162)
                      +++.|++++|||
T Consensus       170 ~lA~e~~~~GIr  181 (274)
T d2pd4a1         170 YLAVDLGKHHIR  181 (274)
T ss_dssp             HHHHHHHTTTCE
T ss_pred             hhHHHhcCcCce
Confidence            999999999996

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.93  E-value=1.3e-25  Score=160.79  Aligned_cols=160  Identities=25%  Similarity=0.272  Sum_probs=125.1

Q ss_pred             CCCC--chHHHHHHHHHHCCCeEEEEecChhhHHhh------h-------cC---Cc-eeEEEec---------------
Q 042185            1 CSQG--GIGHALARAFAASDCRVVATGRSKATMADL------E-------QD---PR-FFVQELD---------------   46 (162)
Q Consensus         1 Ga~~--giG~~ia~~l~~~g~~vi~~~r~~~~~~~~------~-------~~---~~-~~~~~~D---------------   46 (162)
                      ||+|  |||+++|+.|+++|++|++.+|+.......      .       .+   .. .....+|               
T Consensus        15 Gass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~   94 (297)
T d1d7oa_          15 GIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPEDVPEDVKA   94 (297)
T ss_dssp             CCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGGSCHHHHT
T ss_pred             CCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccccccchhhhhh
Confidence            6554  999999999999999999999975321111      0       00   11 1223333               


Q ss_pred             -----cCChHHHHHHHHHHHHHcCCccEEEECCCCCC--CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCe
Q 042185           47 -----VLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC--VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGK  119 (162)
Q Consensus        47 -----~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~  119 (162)
                           .++..+++.+++++.+++|++|++|||||...  ..++.+++.++|++.+++|+.+++.+++++++.+.++  +.
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~--g~  172 (297)
T d1d7oa_          95 NKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPG--GA  172 (297)
T ss_dssp             SHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EE
T ss_pred             hhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhhcC--Cc
Confidence                 35566779999999999999999999999754  4678899999999999999999999999999988544  56


Q ss_pred             EEEecccccc-CCCCCchhhhHhHHHHHHHHHHHHHHhc-cCCCC
Q 042185          120 IINVGSVTVA-APGPWAGTYTASKAALHSLTDTLRLELG-HFGID  162 (162)
Q Consensus       120 iv~isS~~~~-~~~~~~~~y~~sKaa~~~l~~~l~~e~~-~~gi~  162 (162)
                      ++++++.... ...+....|+++|+++.++++.++.|++ ++|||
T Consensus       173 ~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIr  217 (297)
T d1d7oa_         173 SISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIR  217 (297)
T ss_dssp             EEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred             ceeeeehhhcccccccccceecccccccccccccchhccccceEE
Confidence            6666655544 3456777899999999999999999997 67886

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.87  E-value=1.7e-21  Score=136.43  Aligned_cols=143  Identities=22%  Similarity=0.278  Sum_probs=112.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHc-CCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF-GKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~id~vi~~ag~~~~   79 (162)
                      ||++|||+++|++|+++|++|++++|+.++            ..+|+.+.+..+....+...+. +.+|.+++|||+...
T Consensus         8 Gas~GIG~aiA~~la~~Ga~V~~~~~~~~~------------~~~d~~~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~   75 (257)
T d1fjha_           8 GCATGIGAATRKVLEAAGHQIVGIDIRDAE------------VIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQ   75 (257)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSSSS------------EECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTT
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECChHH------------HHHHhcCHHHHHHHHHHHHHHhCCCCcEEEEcCCCCCc
Confidence            899999999999999999999999997543            2468888888887766665544 579999999997533


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEecccc---------------------------ccC-C
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVT---------------------------VAA-P  131 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~---------------------------~~~-~  131 (162)
                             .+.|+....+|..+...+.+...+.+.+.......++.+..                           +.. +
T Consensus        76 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~  148 (257)
T d1fjha_          76 -------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGE  148 (257)
T ss_dssp             -------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCT
T ss_pred             -------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccCC
Confidence                   24578888999999999999998887765555555554432                           222 1


Q ss_pred             CCCchhhhHhHHHHHHHHHHHHHHhccCCCC
Q 042185          132 GPWAGTYTASKAALHSLTDTLRLELGHFGID  162 (162)
Q Consensus       132 ~~~~~~y~~sKaa~~~l~~~l~~e~~~~gi~  162 (162)
                      .++...|+++|+|+.+|+|+++.||+++|||
T Consensus       149 ~~~~~~Y~asKaal~~ltr~lA~el~~~gIr  179 (257)
T d1fjha_         149 QGGNLAYAGSKNALTVAVRKRAAAWGEAGVR  179 (257)
T ss_dssp             THHHHHHHHHHHHHHHHHHHTHHHHHHTTCE
T ss_pred             CcchHHHHHHhhhhhcccccccccccccccc
Confidence            2335579999999999999999999999997

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.75  E-value=3.9e-17  Score=119.09  Aligned_cols=147  Identities=20%  Similarity=0.249  Sum_probs=110.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh-----hHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA-----TMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVL   70 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~-----~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~v   70 (162)
                      ||+|.||.+++++|.++|+.|+.++|...     +++.+..     ..++.++.+|++|.++++++++..     .+|+|
T Consensus         8 GatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~v   82 (357)
T d1db3a_           8 GVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV-----QPDEV   82 (357)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH-----CCSEE
T ss_pred             CCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc-----CCCEE
Confidence            89999999999999999999999999532     2222222     357889999999999999999887     89999


Q ss_pred             EECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC-----------CCCCchhhh
Q 042185           71 VNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA-----------PGPWAGTYT  139 (162)
Q Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~~y~  139 (162)
                      +|+|+.....    .+.++.+..+++|+.++..+++++...- .++..++|++||...+.           +..+...|+
T Consensus        83 ~h~aa~~~~~----~~~~~~~~~~~~Nv~gt~nllea~~~~~-~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~  157 (357)
T d1db3a_          83 YNLGAMSHVA----VSFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYA  157 (357)
T ss_dssp             EECCCCCTTT----TTTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHH
T ss_pred             EEeecccccc----hhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHH
Confidence            9999975432    2335567788999999999998875432 12345799999876441           122356799


Q ss_pred             HhHHHHHHHHHHHHHHhc
Q 042185          140 ASKAALHSLTDTLRLELG  157 (162)
Q Consensus       140 ~sKaa~~~l~~~l~~e~~  157 (162)
                      .+|.+.+.+++.+++.+.
T Consensus       158 ~sK~~~E~~~~~~~~~~~  175 (357)
T d1db3a_         158 VAKLYAYWITVNYRESYG  175 (357)
T ss_dssp             HHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHhC
Confidence            999999999999887653

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.73  E-value=1.8e-19  Score=121.02  Aligned_cols=138  Identities=12%  Similarity=0.086  Sum_probs=98.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+||||+++|+.|+++|++|++++|+.++++++.+    ........+|+++.+++++++       +++|++|||+|.
T Consensus        30 GasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~iDilin~Ag~  102 (191)
T d1luaa1          30 AGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAV-------KGAHFVFTAGAI  102 (191)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHT-------TTCSEEEECCCT
T ss_pred             CCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHh-------cCcCeeeecCcc
Confidence            899999999999999999999999999988776644    245677889999998877653       678999999996


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC-CCchhhhHhHHHHHHHHH
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG-PWAGTYTASKAALHSLTD  150 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-~~~~~y~~sKaa~~~l~~  150 (162)
                      .    +...+.++|+..+++|+.+.+.....+.+.+.... .....+++.....+. .+...|.++|+++..|++
T Consensus       103 g----~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~g~~~y~~sk~a~~~l~~  172 (191)
T d1luaa1         103 G----LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDAT-DKGKEYGGKRAFGALGIGGLKLKLHRACIAKLFE  172 (191)
T ss_dssp             T----CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTT-CEEEEETTEEEECHHHHHHHHHHHHHHHHHHHTS
T ss_pred             c----cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhc-cCcEEecceEEEeccCcCcHHHHHHHHHHHHHHh
Confidence            3    33578999999999998877765443322221111 222233322222111 133569999999998764

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.66  E-value=1.6e-15  Score=109.62  Aligned_cols=143  Identities=19%  Similarity=0.199  Sum_probs=109.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh----hhHHh--hhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK----ATMAD--LEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~----~~~~~--~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+|.||..++++|+++|+.|++++|-.    .....  -....++.++++|++|.+.+.++++..     ++|+|||+|
T Consensus         7 G~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~ViHlA   81 (338)
T d1udca_           7 GGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AIDTVIHFA   81 (338)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCSEEEECC
T ss_pred             CCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc-----CCCEEEECC
Confidence            8999999999999999999999997621    11111  122357889999999999998888875     789999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC------------CCchhhhHhH
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG------------PWAGTYTASK  142 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------------~~~~~y~~sK  142 (162)
                      +....    ..+.++....+++|+.++..+++++..    .+-.++|++||...+.+.            .+...|+.+|
T Consensus        82 a~~~~----~~~~~~~~~~~~~Nv~gt~nlL~~~~~----~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK  153 (338)
T d1udca_          82 GLKAV----GESVQKPLEYYDNNVNGTLRLISAMRA----ANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSK  153 (338)
T ss_dssp             SCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHH
T ss_pred             Cccch----hhHHhCHHHHHHhHHHHHHHHHHHHHH----hCCCEEEecCcceEEccccccccccccccCCCcchHHHHH
Confidence            96422    123345568899999999999888754    344689999987765321            2356799999


Q ss_pred             HHHHHHHHHHHHHh
Q 042185          143 AALHSLTDTLRLEL  156 (162)
Q Consensus       143 aa~~~l~~~l~~e~  156 (162)
                      .+.+.+++....+.
T Consensus       154 ~~~e~~~~~~~~~~  167 (338)
T d1udca_         154 LMVEQILTDLQKAQ  167 (338)
T ss_dssp             HHHHHHHHHHHHHS
T ss_pred             hhhhHHHHHHHhhc
Confidence            99999998777654

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.65  E-value=1.5e-15  Score=110.82  Aligned_cols=148  Identities=17%  Similarity=0.258  Sum_probs=111.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeE-EEEecCh-----hhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRV-VATGRSK-----ATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~v-i~~~r~~-----~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+|.||.+++++|+++|++| +.+++..     +.+..+....++.++.+|++|.+.++.+++..     .+|+|||+|
T Consensus         7 G~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~VihlA   81 (361)
T d1kewa_           7 GGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQY-----QPDAVMHLA   81 (361)
T ss_dssp             STTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CCSEEEECC
T ss_pred             CCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-----CCCEEEECc
Confidence            899999999999999999975 5555422     22333444568899999999999999998876     899999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhh-----cCCCeEEEeccccccCC------------------
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY-----RKKGKIINVGSVTVAAP------------------  131 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~~~iv~isS~~~~~~------------------  131 (162)
                      +....    ..+.++....+++|+.++..+++.+......     .+..++|++||...+..                  
T Consensus        82 a~~~~----~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e  157 (361)
T d1kewa_          82 AESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTE  157 (361)
T ss_dssp             SCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCT
T ss_pred             cccch----hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCccc
Confidence            86322    1223444678999999999999998775432     23468999999775531                  


Q ss_pred             ---CCCchhhhHhHHHHHHHHHHHHHHhc
Q 042185          132 ---GPWAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus       132 ---~~~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                         ..+...|+.+|.+.+.+++.++..+.
T Consensus       158 ~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~  186 (361)
T d1kewa_         158 TTAYAPSSPYSASKASSDHLVRAWRRTYG  186 (361)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence               12234599999999999999887763

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=5.4e-15  Score=106.82  Aligned_cols=147  Identities=16%  Similarity=0.128  Sum_probs=110.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh-----hHHhhhc------CCceeEEEeccCChHHHHHHHHHHHHHcCCccE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA-----TMADLEQ------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDV   69 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~-----~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~   69 (162)
                      ||+|.||.+++++|.++|++|+.++|...     .++.+..      ...+.++.+|++|.+.+..+++..     .+++
T Consensus         8 G~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~~   82 (347)
T d1t2aa_           8 GITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV-----KPTE   82 (347)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             cCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc-----ccce
Confidence            89999999999999999999999999543     2222211      256889999999999999999887     8899


Q ss_pred             EEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC-----------CCCchhh
Q 042185           70 LVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP-----------GPWAGTY  138 (162)
Q Consensus        70 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~y  138 (162)
                      ++++++....    ..+.+.....+++|+.++..++.++...-. .+..++|++||.+.+..           ..+...|
T Consensus        83 v~~~~a~~~~----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Y  157 (347)
T d1t2aa_          83 IYNLGAQSHV----KISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKETTPFYPRSPY  157 (347)
T ss_dssp             EEECCSCCCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHH
T ss_pred             eeeeeecccc----chhhccchhhhhhHHHHHHHHHHHHHHcCC-CCCcEEEEecchheecCCCCCCCCCCCCCCCCCHH
Confidence            9999886432    223455566789999999999888755321 22358999998765421           1234579


Q ss_pred             hHhHHHHHHHHHHHHHHhc
Q 042185          139 TASKAALHSLTDTLRLELG  157 (162)
Q Consensus       139 ~~sKaa~~~l~~~l~~e~~  157 (162)
                      +.+|.+.+.++..++..+.
T Consensus       158 g~sK~~aE~~~~~~~~~~~  176 (347)
T d1t2aa_         158 GAAKLYAYWIVVNFREAYN  176 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHhC
Confidence            9999999999998877653

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.63  E-value=5.9e-15  Score=105.92  Aligned_cols=143  Identities=17%  Similarity=0.123  Sum_probs=107.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecC-----hhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRS-----KATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~-----~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|.||++++++|+++|++|+.+++-     .+.+..+....++.++.+|+++.+++..+++..     ++|+|||+|+
T Consensus         7 GatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~-----~~d~Vih~aa   81 (338)
T d1orra_           7 GGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-----MPDSCFHLAG   81 (338)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-----CCSEEEECCC
T ss_pred             CCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhc-----CCceEEeecc
Confidence            899999999999999999999988742     123334445678899999999999999998887     8999999998


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC-----------------------
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG-----------------------  132 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------------------  132 (162)
                      .....    ...++....+++|+.++..+++++..    .+..+.+++||.....+.                       
T Consensus        82 ~~~~~----~~~~~~~~~~~~Nv~gt~nll~~~~~----~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (338)
T d1orra_          82 QVAMT----TSIDNPCMDFEINVGGTLNLLEAVRQ----YNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYD  153 (338)
T ss_dssp             CCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH----HCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBC
T ss_pred             ccccc----ccccChHHHHHHHHHHHHHHHHhhhc----ccccccccccccccccccccccccccccccccccccccCcc
Confidence            74321    22345578899999999999987643    344456666655433221                       


Q ss_pred             -----CCchhhhHhHHHHHHHHHHHHHHh
Q 042185          133 -----PWAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus       133 -----~~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                           .+...|+.+|...+.+.......+
T Consensus       154 ~~~~~~~~~~y~~~k~~~e~~~~~~~~~~  182 (338)
T d1orra_         154 ESTQLDFHSPYGCSKGAADQYMLDYARIF  182 (338)
T ss_dssp             TTSCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCccccccccccccchhhhhhhhhhhcc
Confidence                 235679999999999888777665

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.62  E-value=1.4e-14  Score=106.39  Aligned_cols=148  Identities=14%  Similarity=0.130  Sum_probs=109.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh--------------------hhHHhh--hcCCceeEEEeccCChHHHHHHHH
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK--------------------ATMADL--EQDPRFFVQELDVLSEQSVQNVLS   58 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~--------------------~~~~~~--~~~~~~~~~~~D~~~~~~i~~~~~   58 (162)
                      ||+|.||.+++++|+++|+.|+++|.-.                    +.+...  ....++.++.+|++|.+.++.+++
T Consensus         8 GatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~   87 (393)
T d1i24a_           8 GGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFLAESFK   87 (393)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHHHHHHHH
Confidence            8999999999999999999999987210                    001111  113568899999999999999998


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC--------
Q 042185           59 NVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA--------  130 (162)
Q Consensus        59 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--------  130 (162)
                      ..     ++|+|+|.|+.... +....+.+.....+.+|+.++..+++++...   .....+++.||...+.        
T Consensus        88 ~~-----~~d~ViHlAa~~~~-~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~---~~~~~~i~~ss~~~~~~~~~~~~~  158 (393)
T d1i24a_          88 SF-----EPDSVVHFGEQRSA-PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF---GEECHLVKLGTMGEYGTPNIDIEE  158 (393)
T ss_dssp             HH-----CCSEEEECCSCCCH-HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH---CTTCEEEEECCGGGGCCCSSCBCS
T ss_pred             hh-----cchheecccccccc-ccccccccccccccccccccccHHHHHHHHh---ccccceeecccccccccccccccc
Confidence            87     89999999986432 2334556777888999999999999887542   2334667777654432        


Q ss_pred             ----------------CCCCchhhhHhHHHHHHHHHHHHHHhc
Q 042185          131 ----------------PGPWAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus       131 ----------------~~~~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                                      +..+...|+.+|.+.+.+++.++.+..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~  201 (393)
T d1i24a_         159 GYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWG  201 (393)
T ss_dssp             SEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred             ccccccccccccccccccccccHHHHHhhhhcccccccccccc
Confidence                            122334699999999999998887654

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.61  E-value=6.7e-15  Score=106.58  Aligned_cols=142  Identities=18%  Similarity=0.247  Sum_probs=106.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh----hHHh--hhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA----TMAD--LEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~----~~~~--~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      ||+|.||++++++|+++|++|+++++-..    ....  ......+.++.+|++|.++++.++...     ++|+|||+|
T Consensus         8 GatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-----~~d~VihlA   82 (347)
T d1z45a2           8 GGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----KIDSVIHFA   82 (347)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----CCCEEEECC
T ss_pred             CCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-----CCCEEEEcc
Confidence            89999999999999999999999875321    1111  112457889999999999999988765     899999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC---------------CCCchhhh
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP---------------GPWAGTYT  139 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---------------~~~~~~y~  139 (162)
                      +.....    ...+.......+|+.++..+++++..    .+..++|++||...+..               ..+...|+
T Consensus        83 a~~~~~----~~~~~~~~~~~~N~~~t~~ll~~~~~----~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~  154 (347)
T d1z45a2          83 GLKAVG----ESTQIPLRYYHNNILGTVVLLELMQQ----YNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYG  154 (347)
T ss_dssp             SCCCHH----HHHHSHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHH
T ss_pred             cccccc----ccccCcccccccchhhhHHHHHHHHh----cccceEEeecceeeecCcccCCCCCccccccCCCCCChhH
Confidence            964321    12234467788999999999888743    34458999999765521               12345799


Q ss_pred             HhHHHHHHHHHHHHHH
Q 042185          140 ASKAALHSLTDTLRLE  155 (162)
Q Consensus       140 ~sKaa~~~l~~~l~~e  155 (162)
                      .+|.+.+.+++.+...
T Consensus       155 ~sK~~~E~~~~~~~~~  170 (347)
T d1z45a2         155 HTKYAIENILNDLYNS  170 (347)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHh
Confidence            9999999999888654

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.55  E-value=1.2e-13  Score=98.55  Aligned_cols=145  Identities=18%  Similarity=0.146  Sum_probs=108.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh-----hhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK-----ATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~-----~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|.||++++++|+++|++|+.++|..     +.++.+..+.++.++.+|++|.+++...+...     ..++++++++
T Consensus         7 G~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~~~~~~a~   81 (321)
T d1rpna_           7 GITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QPQEVYNLAA   81 (321)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCS
T ss_pred             CCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhccc-----cccccccccc
Confidence            8999999999999999999999999864     33444544567899999999999999888887     7788888887


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC-----------CCCCchhhhHhHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA-----------PGPWAGTYTASKAA  144 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~~y~~sKaa  144 (162)
                      .....    ...++....+..|+.++..++.++...   ....++++.||...+.           +..+...|+.+|.+
T Consensus        82 ~~~~~----~~~~~~~~~~~~n~~g~~~~l~~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~  154 (321)
T d1rpna_          82 QSFVG----ASWNQPVTTGVVDGLGVTHLLEAIRQF---SPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLY  154 (321)
T ss_dssp             CCCHH----HHTTSHHHHHHHHTHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHH
T ss_pred             ccccc----ccccchHHHHhhhhhchHHHHHHHHHh---CCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHH
Confidence            64321    122345678889999999988886442   2234666666654321           22345679999999


Q ss_pred             HHHHHHHHHHHhc
Q 042185          145 LHSLTDTLRLELG  157 (162)
Q Consensus       145 ~~~l~~~l~~e~~  157 (162)
                      .+.+++.++.+..
T Consensus       155 ~E~~~~~~~~~~~  167 (321)
T d1rpna_         155 GHWITVNYRESFG  167 (321)
T ss_dssp             HHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhhcC
Confidence            9999998887653

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.55  E-value=1.1e-13  Score=99.39  Aligned_cols=148  Identities=22%  Similarity=0.197  Sum_probs=109.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChh-----hHHhhh------cCCceeEEEeccCChHHHHHHHHHHHHHcCCccE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKA-----TMADLE------QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDV   69 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~-----~~~~~~------~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~   69 (162)
                      ||+|.||++++++|+++|+.|+.++|...     ++..+.      ....+.+..+|+++.+++...++..     ++|+
T Consensus         8 GatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~-----~~D~   82 (339)
T d1n7ha_           8 GITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI-----KPDE   82 (339)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh-----ccch
Confidence            89999999999999999999999998532     222221      1256778999999999999998876     8999


Q ss_pred             EEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-CCCeEEEeccccccCC----------CCCchhh
Q 042185           70 LVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKIINVGSVTVAAP----------GPWAGTY  138 (162)
Q Consensus        70 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~----------~~~~~~y  138 (162)
                      |||+|+....    ....++....+..|+.+...+..++.....+. ...++++.||......          ..+...|
T Consensus        83 Vih~Aa~~~~----~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p~~~Y  158 (339)
T d1n7ha_          83 VYNLAAQSHV----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPY  158 (339)
T ss_dssp             EEECCSCCCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHH
T ss_pred             hhhccccccc----cccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCCCCCcchh
Confidence            9999996432    12334556788899999999888886654333 2345666665543321          2345679


Q ss_pred             hHhHHHHHHHHHHHHHHhc
Q 042185          139 TASKAALHSLTDTLRLELG  157 (162)
Q Consensus       139 ~~sKaa~~~l~~~l~~e~~  157 (162)
                      +.+|.+.+.++..+.....
T Consensus       159 ~~sK~~~E~~~~~~~~~~~  177 (339)
T d1n7ha_         159 AASKCAAHWYTVNYREAYG  177 (339)
T ss_dssp             HHHHHHHHHHHHHHHHHHC
T ss_pred             hHHHHHHHHHHHHHHHHhC
Confidence            9999999999998887653

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.54  E-value=1.1e-13  Score=99.82  Aligned_cols=141  Identities=16%  Similarity=0.120  Sum_probs=106.5

Q ss_pred             CCCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      ||+|.||++++++|+++|. .|+.+++..+...+.....++.++.+|+++.+++.+.+.   +   .+|+|||+|+....
T Consensus         7 G~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~---~---~~d~Vih~a~~~~~   80 (342)
T d2blla1           7 GVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHV---K---KCDVVLPLVAIATP   80 (342)
T ss_dssp             TCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHH---H---HCSEEEECBCCCCH
T ss_pred             CCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHH---h---CCCccccccccccc
Confidence            8999999999999999995 899999887777777677889999999998776554322   1   47999999997433


Q ss_pred             CCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC------------------CCchhhhHh
Q 042185           80 GPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG------------------PWAGTYTAS  141 (162)
Q Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------------------~~~~~y~~s  141 (162)
                      .    ...++....+.+|+.++..+++.+..     .+.+.+++||...+...                  .+...|+.+
T Consensus        81 ~----~~~~~~~~~~~~nv~gt~~ll~~~~~-----~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~s  151 (342)
T d2blla1          81 I----EYTRNPLRVFELDFEENLRIIRYCVK-----YRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVS  151 (342)
T ss_dssp             H----HHHHSHHHHHHHHTHHHHHHHHHHHH-----TTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHH
T ss_pred             c----ccccCCcccccccccccccccccccc-----ccccccccccccccccccccccccccccccccccCCCcchhhhc
Confidence            1    12234457789999999999998633     23466777776543321                  223579999


Q ss_pred             HHHHHHHHHHHHHHh
Q 042185          142 KAALHSLTDTLRLEL  156 (162)
Q Consensus       142 Kaa~~~l~~~l~~e~  156 (162)
                      |.+.+.+++.+++.+
T Consensus       152 K~~~E~~~~~~~~~~  166 (342)
T d2blla1         152 KQLLDRVIWAYGEKE  166 (342)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             ccchhhhhhhhhccc
Confidence            999999999888775

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.49  E-value=3.3e-13  Score=96.10  Aligned_cols=130  Identities=16%  Similarity=0.180  Sum_probs=99.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|.||++++++|+++|+.++++++..+               +|+.+.+.+..++..-     .+|.++|+++.....
T Consensus         9 G~tGfiG~~l~~~L~~~g~~vi~~~~~~~---------------~~~~~~~~~~~~~~~~-----~~d~v~~~a~~~~~~   68 (315)
T d1e6ua_           9 GHRGMVGSAIRRQLEQRGDVELVLRTRDE---------------LNLLDSRAVHDFFASE-----RIDQVYLAAAKVGGI   68 (315)
T ss_dssp             TTTSHHHHHHHHHHTTCTTEEEECCCTTT---------------CCTTCHHHHHHHHHHH-----CCSEEEECCCCCCCH
T ss_pred             cCCcHHHHHHHHHHHHCcCEEEEecCchh---------------ccccCHHHHHHHHhhc-----CCCEEEEcchhcccc
Confidence            89999999999999999998887765432               6899998888887654     789999999764321


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC----------------CCchhhhHhHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG----------------PWAGTYTASKAA  144 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------------~~~~~y~~sKaa  144 (162)
                         .....+....+++|+.++..+++++..    .+-.++|++||.+.+.+.                ++...|+.+|.+
T Consensus        69 ---~~~~~~~~~~~~~Nv~gt~~ll~~a~~----~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~  141 (315)
T d1e6ua_          69 ---VANNTYPADFIYQNMMIESNIIHAAHQ----NDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIA  141 (315)
T ss_dssp             ---HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHH
T ss_pred             ---ccchhhHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHH
Confidence               122344556688899999998888644    344589999998766421                123469999999


Q ss_pred             HHHHHHHHHHHhc
Q 042185          145 LHSLTDTLRLELG  157 (162)
Q Consensus       145 ~~~l~~~l~~e~~  157 (162)
                      .+.+++.+.++.+
T Consensus       142 ~E~~~~~~~~~~g  154 (315)
T d1e6ua_         142 GIKLCESYNRQYG  154 (315)
T ss_dssp             HHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhC
Confidence            9999999887753

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=3.7e-13  Score=96.08  Aligned_cols=136  Identities=13%  Similarity=0.111  Sum_probs=95.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecCh----hhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSK----ATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~----~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|.||++++++|.++|++|+.+++..    +.+........+.....|+.+.            .+.++|+|||+|+.
T Consensus         8 G~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~------------~~~~~d~VihlAa~   75 (312)
T d2b69a1           8 GGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP------------LYIEVDQIYHLASP   75 (312)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC------------CCCCCSEEEECCSC
T ss_pred             CCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHH------------HHcCCCEEEECccc
Confidence            8999999999999999999999998632    2222222334455555554322            12369999999986


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC----------------CCCchhhhH
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP----------------GPWAGTYTA  140 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----------------~~~~~~y~~  140 (162)
                      .....    ..++....+++|+.++..+++++..    .+ .++|++||.+.+..                ..+...|+.
T Consensus        76 ~~~~~----~~~~~~~~~~~Nv~g~~~ll~~~~~----~~-~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~  146 (312)
T d2b69a1          76 ASPPN----YMYNPIKTLKTNTIGTLNMLGLAKR----VG-ARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDE  146 (312)
T ss_dssp             CSHHH----HTTCHHHHHHHHHHHHHHHHHHHHH----HT-CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHH
T ss_pred             CCchh----HHhCHHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHH
Confidence            43211    1234467788999999999888643    22 48999999765531                124567999


Q ss_pred             hHHHHHHHHHHHHHHhc
Q 042185          141 SKAALHSLTDTLRLELG  157 (162)
Q Consensus       141 sKaa~~~l~~~l~~e~~  157 (162)
                      +|.+.+.+++.++.+++
T Consensus       147 sK~~~E~~~~~~~~~~~  163 (312)
T d2b69a1         147 GKRVAETMCYAYMKQEG  163 (312)
T ss_dssp             HHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHhC
Confidence            99999999999887753

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.47  E-value=7.5e-13  Score=95.64  Aligned_cols=145  Identities=16%  Similarity=0.140  Sum_probs=108.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHh----hhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMAD----LEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~----~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|.||.++++.|.++|++|+.++|+.+....    ......+.++.+|++|++.+..+++..     .+|+++|+++.
T Consensus        15 G~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~-----~~~~v~~~aa~   89 (356)
T d1rkxa_          15 GHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-----QPEIVFHMAAQ   89 (356)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSC
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhc-----hhhhhhhhhcc
Confidence            899999999999999999999999997654332    222357899999999999999988877     89999999986


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC------------CCCCchhhhHhHHH
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA------------PGPWAGTYTASKAA  144 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~------------~~~~~~~y~~sKaa  144 (162)
                      ...    ..+.+..+..+++|+.++..+++++...   .....+++.|+.....            +..+...|+.+|..
T Consensus        90 ~~~----~~~~~~~~~~~~~Nv~g~~n~l~~~~~~---~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~  162 (356)
T d1rkxa_          90 PLV----RLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGC  162 (356)
T ss_dssp             CCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHH
T ss_pred             ccc----cccccCCccccccccccchhhhhhhhcc---ccccccccccccccccccccccccccccccCCCCcccccccc
Confidence            422    2334566788999999999988887542   2233555555443332            11235569999999


Q ss_pred             HHHHHHHHHHHhc
Q 042185          145 LHSLTDTLRLELG  157 (162)
Q Consensus       145 ~~~l~~~l~~e~~  157 (162)
                      .+.+++.++.++.
T Consensus       163 ~e~~~~~~~~~~~  175 (356)
T d1rkxa_         163 AELVTSSYRNSFF  175 (356)
T ss_dssp             HHHHHHHHHHHHS
T ss_pred             chhhhhHHhhhcc
Confidence            9999888877653

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=6.3e-13  Score=89.45  Aligned_cols=127  Identities=14%  Similarity=0.082  Sum_probs=87.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|.||++++++|+++|++|.++.|+++++.... ...+.++.+|++|.+++.++++       ..|.||+++|.....
T Consensus        10 GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~-~~~~~~~~gD~~d~~~l~~al~-------~~d~vi~~~g~~~~~   81 (205)
T d1hdoa_          10 GATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-PRPAHVVVGDVLQAADVDKTVA-------GQDAVIVLLGTRNDL   81 (205)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-CCCSEEEESCTTSHHHHHHHHT-------TCSEEEECCCCTTCC
T ss_pred             CCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccc-ccccccccccccchhhHHHHhc-------CCCEEEEEeccCCch
Confidence            89999999999999999999999999988755432 3568899999999988776654       469999999864332


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCC----chhhhHhHHHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPW----AGTYTASKAALHSLTD  150 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----~~~y~~sKaa~~~l~~  150 (162)
                      ..  .         +++..+...+    ++.+++.+-.++|++||.......+.    ...|...|...+.+.+
T Consensus        82 ~~--~---------~~~~~~~~~l----~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~e~~l~  140 (205)
T d1hdoa_          82 SP--T---------TVMSEGARNI----VAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLR  140 (205)
T ss_dssp             SC--C---------CHHHHHHHHH----HHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHH
T ss_pred             hh--h---------hhhHHHHHHH----HHHHHhcCCCeEEEEeeeeccCCCccccccccccchHHHHHHHHHH
Confidence            11  1         1222333333    34455666679999998765543322    2345555655555443

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=7.4e-13  Score=95.52  Aligned_cols=142  Identities=15%  Similarity=0.219  Sum_probs=105.7

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecC----------hhhHHhh--hcCCceeEEEeccCChHHHHHHHHHHHHHcCCcc
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRS----------KATMADL--EQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKID   68 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~----------~~~~~~~--~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id   68 (162)
                      ||+|.||.+++++|+++|+.|+.+++.          .+..+..  ....++.++.+|++|.+.++.++...     .++
T Consensus         9 G~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~~   83 (346)
T d1ek6a_           9 GGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-----SFM   83 (346)
T ss_dssp             TTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-----CEE
T ss_pred             CCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccc-----ccc
Confidence            899999999999999999999998741          1122222  23467899999999999998888764     889


Q ss_pred             EEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC------------CCCch
Q 042185           69 VLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP------------GPWAG  136 (162)
Q Consensus        69 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~------------~~~~~  136 (162)
                      .++|+|+....    ..+.++....+++|+.++..+++++..    .+-.+++++||...+..            .....
T Consensus        84 ~i~h~Aa~~~~----~~~~~~p~~~~~~Nv~gt~~l~~~~~~----~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~  155 (346)
T d1ek6a_          84 AVIHFAGLKAV----GESVQKPLDYYRVNLTGTIQLLEIMKA----HGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTN  155 (346)
T ss_dssp             EEEECCSCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSS
T ss_pred             cccccccccCc----HhhHhCHHHHHHhhhcccccccchhhh----cCcccccccccceeeeccccccccccccccccCC
Confidence            99999996432    123344567789999999998888633    44458899888754432            12344


Q ss_pred             hhhHhHHHHHHHHHHHHHH
Q 042185          137 TYTASKAALHSLTDTLRLE  155 (162)
Q Consensus       137 ~y~~sKaa~~~l~~~l~~e  155 (162)
                      .|+.+|.+.+..++.++..
T Consensus       156 ~Y~~~k~~~e~~~~~~~~~  174 (346)
T d1ek6a_         156 PYGKSKFFIEEMIRDLCQA  174 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHh
Confidence            7999999999988877654

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.43  E-value=6.7e-13  Score=96.36  Aligned_cols=142  Identities=15%  Similarity=0.072  Sum_probs=102.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|.||.+++++|.++|+.|+.+++....... .......+..+|+.+.+++..++       ..+|.|||+++.....
T Consensus        22 GgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~-------~~~d~Vih~a~~~~~~   93 (363)
T d2c5aa1          22 GAGGFIASHIARRLKHEGHYVIASDWKKNEHMT-EDMFCDEFHLVDLRVMENCLKVT-------EGVDHVFNLAADMGGM   93 (363)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC-GGGTCSEEEECCTTSHHHHHHHH-------TTCSEEEECCCCCCCH
T ss_pred             CCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh-hhcccCcEEEeechhHHHHHHHh-------hcCCeEeecccccccc
Confidence            899999999999999999999999875432111 11134567778988877654443       2679999999864332


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC------------------CCCchhhhHhH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP------------------GPWAGTYTASK  142 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~------------------~~~~~~y~~sK  142 (162)
                      .   ...+.....+.+|+.++..++.++..    .+..++|++||...+..                  ..+...|+.+|
T Consensus        94 ~---~~~~~~~~~~~~n~~gt~~ll~~~~~----~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK  166 (363)
T d2c5aa1          94 G---FIQSNHSVIMYNNTMISFNMIEAARI----NGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEK  166 (363)
T ss_dssp             H---HHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHH
T ss_pred             c---ccccccccccccccchhhHHHHhHHh----hCccccccccccccccccccccccccccccccCCcCCCCCHHHHHH
Confidence            1   12344567788899999888888644    44568999999766532                  12345799999


Q ss_pred             HHHHHHHHHHHHHhc
Q 042185          143 AALHSLTDTLRLELG  157 (162)
Q Consensus       143 aa~~~l~~~l~~e~~  157 (162)
                      .+.+.+++.+..+++
T Consensus       167 ~~~E~~~~~~~~~~g  181 (363)
T d2c5aa1         167 LATEELCKHYNKDFG  181 (363)
T ss_dssp             HHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhC
Confidence            999999998887753

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.43  E-value=7.4e-13  Score=95.55  Aligned_cols=140  Identities=15%  Similarity=0.112  Sum_probs=101.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+|.||.+++++|+++|++|+.+.|+......+..       .....++..|+.+.+++..++       ...|+++++
T Consensus        18 G~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------~~~~~v~~~   90 (342)
T d1y1pa1          18 GANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI-------KGAAGVAHI   90 (342)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT-------TTCSEEEEC
T ss_pred             CCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhc-------ccchhhhhh
Confidence            899999999999999999999999998765554321       233445778999988766554       256999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC----------------------
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP----------------------  131 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----------------------  131 (162)
                      ++....    ..+   ....+..|+.++..+++.+...   +...++|++||..+...                      
T Consensus        91 a~~~~~----~~~---~~~~~~~nv~gt~~ll~~~~~~---~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~  160 (342)
T d1y1pa1          91 ASVVSF----SNK---YDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDK  160 (342)
T ss_dssp             CCCCSC----CSC---HHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHH
T ss_pred             cccccc----ccc---ccccccchhhhHHHHHHhhhcc---cccccccccccceeeccCCCCCCCccccccccccccccc
Confidence            986432    122   3456778999998888886442   23568999998754321                      


Q ss_pred             ---------CCCchhhhHhHHHHHHHHHHHHHHhc
Q 042185          132 ---------GPWAGTYTASKAALHSLTDTLRLELG  157 (162)
Q Consensus       132 ---------~~~~~~y~~sKaa~~~l~~~l~~e~~  157 (162)
                               ..+...|+.+|.+.+.++..+.++..
T Consensus       161 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~  195 (342)
T d1y1pa1         161 AKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK  195 (342)
T ss_dssp             HHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             cccccccCCCCCcCcccchhHhHHHHHHHhhhhcc
Confidence                     01233699999999999988877653

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.42  E-value=1.9e-12  Score=93.26  Aligned_cols=142  Identities=18%  Similarity=0.174  Sum_probs=104.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecC----hhhHHhh---h---cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRS----KATMADL---E---QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVL   70 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~----~~~~~~~---~---~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~v   70 (162)
                      ||+|.||.+++++|.++|++|+.++|.    .+.....   .   ....+.++.+|..|.......       ....+.+
T Consensus        23 G~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~-------~~~~~~v   95 (341)
T d1sb8a_          23 GVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNA-------CAGVDYV   95 (341)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHH-------HTTCSEE
T ss_pred             cCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccc-------ccccccc
Confidence            899999999999999999999999862    1222111   1   125688999999887654432       2367888


Q ss_pred             EECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC-----------CCCchhhh
Q 042185           71 VNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP-----------GPWAGTYT  139 (162)
Q Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~y~  139 (162)
                      ++.+.....    ..+.++....+++|+.++..+++++..    .+..++|++||...+..           ..+...|+
T Consensus        96 ~~~~a~~~~----~~~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~  167 (341)
T d1sb8a_          96 LHQAALGSV----PRSINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYA  167 (341)
T ss_dssp             EECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHH
T ss_pred             ccccccccc----cccccCccchhheeehhHHHHHHHHHh----cCCceEEEcccceeeCCCCCCCccCCCCCCCCCcch
Confidence            888875322    124566778999999999999998744    34469999999876532           22346899


Q ss_pred             HhHHHHHHHHHHHHHHhc
Q 042185          140 ASKAALHSLTDTLRLELG  157 (162)
Q Consensus       140 ~sKaa~~~l~~~l~~e~~  157 (162)
                      .+|.+.+.+++.+++...
T Consensus       168 ~sK~~~E~~~~~~~~~~~  185 (341)
T d1sb8a_         168 VTKYVNELYADVFSRCYG  185 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHhC
Confidence            999999999999887654

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.40  E-value=2e-12  Score=94.47  Aligned_cols=144  Identities=24%  Similarity=0.290  Sum_probs=103.7

Q ss_pred             CCCCchHHHHHHHHHH-CCCeEEEEecC------------hhhHH-hhh---------cCCceeEEEeccCChHHHHHHH
Q 042185            1 CSQGGIGHALARAFAA-SDCRVVATGRS------------KATMA-DLE---------QDPRFFVQELDVLSEQSVQNVL   57 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~-~g~~vi~~~r~------------~~~~~-~~~---------~~~~~~~~~~D~~~~~~i~~~~   57 (162)
                      ||+|.||.+++++|++ .|++|+++|+-            .+... ...         ......++.+|++|.+.+++++
T Consensus         9 G~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~   88 (383)
T d1gy8a_           9 GGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLNGVF   88 (383)
T ss_dssp             TTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHHHhhhhh
Confidence            8999999999999986 68999998741            11111 111         1245778999999999888887


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC------
Q 042185           58 SNVLEKFGKIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP------  131 (162)
Q Consensus        58 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~------  131 (162)
                      +..    .++|+|||+|+.....    ...+.....+++|+.++..++.++..    .+..+++++++...+..      
T Consensus        89 ~~~----~~~d~ViH~Aa~~~~~----~~~~~~~~~~~~N~~~t~~~l~~~~~----~~~~~~~~~~s~~~~~~~~~~~~  156 (383)
T d1gy8a_          89 TRH----GPIDAVVHMCAFLAVG----ESVRDPLKYYDNNVVGILRLLQAMLL----HKCDKIIFSSSAAIFGNPTMGSV  156 (383)
T ss_dssp             HHS----CCCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGTBSCCC---
T ss_pred             hcc----ceeehhhccccccccc----ccccccccccccccccccccchhhhc----cCCcccccccccccccccccccc
Confidence            654    5789999999974332    22344566788999999998888643    44457777776654321      


Q ss_pred             ------------CCCchhhhHhHHHHHHHHHHHHHHh
Q 042185          132 ------------GPWAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus       132 ------------~~~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                                  ..+...|+.+|.+.+.+++.+...+
T Consensus       157 ~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~  193 (383)
T d1gy8a_         157 STNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY  193 (383)
T ss_dssp             --CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh
Confidence                        2235679999999999999887764

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.40  E-value=5.7e-13  Score=95.33  Aligned_cols=141  Identities=21%  Similarity=0.262  Sum_probs=103.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeE------EEEec-----ChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccE
Q 042185            1 CSQGGIGHALARAFAASDCRV------VATGR-----SKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDV   69 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~v------i~~~r-----~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~   69 (162)
                      ||+|.||.+++++|+++|+.|      +..+.     +...+........+.++..|.++.......       ...+|.
T Consensus         7 G~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-------~~~~d~   79 (322)
T d1r6da_           7 GGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARE-------LRGVDA   79 (322)
T ss_dssp             TTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHH-------TTTCCE
T ss_pred             CCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhcc-------ccccce
Confidence            899999999999999998754      33332     222333344456889999999998755432       347899


Q ss_pred             EEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCC-----------CCchhh
Q 042185           70 LVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPG-----------PWAGTY  138 (162)
Q Consensus        70 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~y  138 (162)
                      ++|+|+....    .....+....+++|+.++..+++++..    .+..++|++||...+.+.           .+...|
T Consensus        80 vi~~a~~~~~----~~~~~~~~~~~~~N~~gt~~ll~~~~~----~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y  151 (322)
T d1r6da_          80 IVHFAAESHV----DRSIAGASVFTETNVQGTQTLLQCAVD----AGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPY  151 (322)
T ss_dssp             EEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHH
T ss_pred             EEeecccccc----cccccchHHHhhhhHHHHHHHHHHHHH----cCCceEEEeecceeecCCCCCCCCCCCCCCCCCHH
Confidence            9999986432    233455567788999999999988743    345689999998765432           234579


Q ss_pred             hHhHHHHHHHHHHHHHHh
Q 042185          139 TASKAALHSLTDTLRLEL  156 (162)
Q Consensus       139 ~~sKaa~~~l~~~l~~e~  156 (162)
                      +.+|.+.+.+++.++++.
T Consensus       152 ~~sK~~~E~~~~~~~~~~  169 (322)
T d1r6da_         152 AASKAGSDLVARAYHRTY  169 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHh
Confidence            999999999999998775

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.36  E-value=2.5e-12  Score=92.80  Aligned_cols=139  Identities=18%  Similarity=0.149  Sum_probs=97.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeE--EEEecC-----hhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRV--VATGRS-----KATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~v--i~~~r~-----~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+|.||.+++++|.++|+.|  +..++-     ..... .....++.++.+|++|.+.+..++.       ..+.++|.
T Consensus         9 GgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~-~~~~~~i~~~~~Di~d~~~~~~~~~-------~~~~v~~~   80 (346)
T d1oc2a_           9 GGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLE-AILGDRVELVVGDIADAELVDKLAA-------KADAIVHY   80 (346)
T ss_dssp             TTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTG-GGCSSSEEEEECCTTCHHHHHHHHT-------TCSEEEEC
T ss_pred             CCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHH-HhhcCCeEEEEccCCCHHHHHHHHh-------hhhhhhhh
Confidence            899999999999999999864  444421     11111 1223578999999999888777642       45778999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC----------------------
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP----------------------  131 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----------------------  131 (162)
                      |+.....    ....+....+++|+.++..++..+...     +.++|++||...+..                      
T Consensus        81 a~~~~~~----~~~~~~~~~~~~N~~g~~nll~~~~~~-----~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~  151 (346)
T d1oc2a_          81 AAESHND----NSLNDPSPFIHTNFIGTYTLLEAARKY-----DIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAET  151 (346)
T ss_dssp             CSCCCHH----HHHHCCHHHHHHHTHHHHHHHHHHHHH-----TCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTS
T ss_pred             hhccccc----chhhCcccceeeehHhHHhhhhhhccc-----cccccccccceEecccCccccccccccCcccccccCC
Confidence            8764331    122334577899999999998876442     247888877665421                      


Q ss_pred             -CCCchhhhHhHHHHHHHHHHHHHHh
Q 042185          132 -GPWAGTYTASKAALHSLTDTLRLEL  156 (162)
Q Consensus       132 -~~~~~~y~~sKaa~~~l~~~l~~e~  156 (162)
                       ..+...|+.+|.+.+.+++.+..+.
T Consensus       152 ~~~p~s~Y~~sK~~~E~~~~~~~~~~  177 (346)
T d1oc2a_         152 NYNPSSPYSSTKAASDLIVKAWVRSF  177 (346)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHc
Confidence             1123569999999999999888765

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.19  E-value=4.9e-11  Score=83.59  Aligned_cols=124  Identities=18%  Similarity=0.132  Sum_probs=89.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|.||.++++.|.++|. ++.++++...            +..|++|.+.+++++++.     ++|+|||+||.....
T Consensus         7 G~tGfiG~~l~~~L~~~g~-~v~~~~~~~~------------~~~Dl~~~~~~~~~i~~~-----~~D~Vih~Aa~~~~~   68 (298)
T d1n2sa_           7 GKTGQVGWELQRSLAPVGN-LIALDVHSKE------------FCGDFSNPKGVAETVRKL-----RPDVIVNAAAHTAVD   68 (298)
T ss_dssp             CTTSHHHHHHHHHTTTTSE-EEEECTTCSS------------SCCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCHH
T ss_pred             CCCCHHHHHHHHHHHhCCC-EEEEECCCcc------------ccCcCCCHHHHHHHHHHc-----CCCEEEEeccccccc
Confidence            8999999999999999885 5555554321            237999999999988876     799999999975332


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC-----------CCCchhhhHhHHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP-----------GPWAGTYTASKAALHSLT  149 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~y~~sKaa~~~l~  149 (162)
                      .    +.+.-...+.+|+.++..+..++.     ..+.+++++||...+.+           ..+...|+.+|.+.+.+.
T Consensus        69 ~----~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~  139 (298)
T d1n2sa_          69 K----AESEPELAQLLNATSVEAIAKAAN-----ETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKAL  139 (298)
T ss_dssp             H----HTTCHHHHHHHHTHHHHHHHHHHT-----TTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHH
T ss_pred             c----cccCccccccccccccccchhhhh-----ccccccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhH
Confidence            1    223345677889999988888763     23467888887755432           223457999998888766


Q ss_pred             HH
Q 042185          150 DT  151 (162)
Q Consensus       150 ~~  151 (162)
                      +.
T Consensus       140 ~~  141 (298)
T d1n2sa_         140 QD  141 (298)
T ss_dssp             HH
T ss_pred             Hh
Confidence            54

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=4.5e-11  Score=81.66  Aligned_cols=130  Identities=13%  Similarity=0.056  Sum_probs=93.0

Q ss_pred             CCCCchHHHHHHHHHHCCC--eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDC--RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||+|.||++++++|.++|.  +|++++|++....... ...+....+|+.+.+++.       +.+...|++||++|...
T Consensus        21 GaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-~~~i~~~~~D~~~~~~~~-------~~~~~~d~vi~~~~~~~   92 (232)
T d2bkaa1          21 GASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-YKNVNQEVVDFEKLDDYA-------SAFQGHDVGFCCLGTTR   92 (232)
T ss_dssp             CTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-GGGCEEEECCGGGGGGGG-------GGGSSCSEEEECCCCCH
T ss_pred             CCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-cceeeeeeeccccccccc-------ccccccccccccccccc
Confidence            8999999999999999985  7999999765433211 235666677887765443       33346899999998531


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHHH
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTDT  151 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~~  151 (162)
                             ..........+|+..+..+++.+..    .+-.++|++|+......  ....|+.+|...+...+.
T Consensus        93 -------~~~~~~~~~~~~~~~~~~~~~~a~~----~~v~~fi~~Ss~~~~~~--~~~~Y~~~K~~~E~~l~~  152 (232)
T d2bkaa1          93 -------GKAGAEGFVRVDRDYVLKSAELAKA----GGCKHFNLLSSKGADKS--SNFLYLQVKGEVEAKVEE  152 (232)
T ss_dssp             -------HHHHHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCTT--CSSHHHHHHHHHHHHHHT
T ss_pred             -------cccchhhhhhhcccccceeeecccc----cCccccccCCccccccC--ccchhHHHHHHhhhcccc
Confidence                   2344566678899988888887633    44568999998766543  345699999988876554

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.13  E-value=4.3e-10  Score=78.22  Aligned_cols=122  Identities=18%  Similarity=0.282  Sum_probs=87.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+|.||.+++++|.++|++|+.++|+.                +|++|.+++++++++.     ++|+|||+++.....
T Consensus         8 GasGfiG~~l~~~L~~~g~~Vi~~~r~~----------------~D~~d~~~~~~~l~~~-----~~d~vih~a~~~~~~   66 (281)
T d1vl0a_           8 GANGQLGREIQKQLKGKNVEVIPTDVQD----------------LDITNVLAVNKFFNEK-----KPNVVINCAAHTAVD   66 (281)
T ss_dssp             STTSHHHHHHHHHHTTSSEEEEEECTTT----------------CCTTCHHHHHHHHHHH-----CCSEEEECCCCCCHH
T ss_pred             CCCCHHHHHHHHHHHhCCCEEEEeechh----------------ccCCCHHHHHHHHHHc-----CCCEEEeeccccccc
Confidence            8999999999999999999999999863                5899999999988876     889999999864321


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccC-----------CCCCchhhhHhHHHHHHHH
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAA-----------PGPWAGTYTASKAALHSLT  149 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~~y~~sKaa~~~l~  149 (162)
                          ......+..++.|+.....+.......     ...+++.||...+.           +..+...|+.+|...+.++
T Consensus        67 ----~~~~~~~~~~~~n~~~~~~~~~~~~~~-----~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~  137 (281)
T d1vl0a_          67 ----KCEEQYDLAYKINAIGPKNLAAAAYSV-----GAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFV  137 (281)
T ss_dssp             ----HHHHCHHHHHHHHTHHHHHHHHHHHHH-----TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             ----cccccchhhcccccccccccccccccc-----cccccccccceeeeccccccccccccccchhhhhhhhhHHHHHH
Confidence                122333566677777776665554332     23666666654332           2234556899998887766


Q ss_pred             HHH
Q 042185          150 DTL  152 (162)
Q Consensus       150 ~~l  152 (162)
                      +..
T Consensus       138 ~~~  140 (281)
T d1vl0a_         138 KAL  140 (281)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            543

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.01  E-value=2.9e-09  Score=71.96  Aligned_cols=123  Identities=15%  Similarity=0.071  Sum_probs=85.0

Q ss_pred             CCCCchHHHHHHHHHHCCC--eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDC--RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||+|.||+++++.|+++|+  .|+...|+++......  ..+.++.+|+++.+++.++++       .+|.+||+++...
T Consensus        10 GatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~-------~~d~vi~~a~~~~   80 (252)
T d2q46a1          10 GASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG--GEADVFIGDITDADSINPAFQ-------GIDALVILTSAVP   80 (252)
T ss_dssp             STTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT--CCTTEEECCTTSHHHHHHHHT-------TCSEEEECCCCCC
T ss_pred             CCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhcc--CCcEEEEeeeccccccccccc-------cceeeEEEEeecc
Confidence            8999999999999999996  4666788887665543  467889999999987766543       5799999998643


Q ss_pred             CCC---------CCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCch
Q 042185           79 VGP---------LAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAG  136 (162)
Q Consensus        79 ~~~---------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  136 (162)
                      ...         ........+.....+|+.+...++.....    ...+...+.++.....+..+..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~s~~~~~~~~~~~~  143 (252)
T d2q46a1          81 KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV----AGVKHIVVVGSMGGTNPDHPLN  143 (252)
T ss_dssp             EECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHH----HTCSEEEEEEETTTTCTTCGGG
T ss_pred             ccccccchhhhhhcccccccchhhhccccccceeecccccc----ccccccccccccccCCCCcccc
Confidence            211         11112233455667788888777665433    4456788888766655544333

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.77  E-value=2.3e-08  Score=66.82  Aligned_cols=124  Identities=17%  Similarity=0.136  Sum_probs=81.6

Q ss_pred             CCCCchHHHHHHHHHHCCC--eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDC--RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||+|.||++++++|.++|+  +|+...|+...     ....   +..+..|..++   .+   ...+.+|.+|+++|...
T Consensus         9 GatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-----~~~~---~~~~~~d~~~~---~~---~~~~~~d~vi~~~g~~~   74 (212)
T d2a35a1           9 GATGLTGEHLLDRILSEPTLAKVIAPARKALA-----EHPR---LDNPVGPLAEL---LP---QLDGSIDTAFCCLGTTI   74 (212)
T ss_dssp             CTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----CCTT---EECCBSCHHHH---GG---GCCSCCSEEEECCCCCH
T ss_pred             CCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-----hccc---ccccccchhhh---hh---ccccchheeeeeeeeec
Confidence            8999999999999999997  56666765321     1112   23344443322   11   22357899999998642


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCCCCCchhhhHhHHHHHHHHH
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAPGPWAGTYTASKAALHSLTD  150 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sKaa~~~l~~  150 (162)
                      ..      ...-+....+|+.++..+++.+    ++.+..+++++||..+...  ....|..+|...+...+
T Consensus        75 ~~------~~~~~~~~~~~~~~~~~~~~~a----~~~~v~~~i~~Ss~~~~~~--~~~~y~~~K~~~E~~l~  134 (212)
T d2a35a1          75 KE------AGSEEAFRAVDFDLPLAVGKRA----LEMGARHYLVVSALGADAK--SSIFYNRVKGELEQALQ  134 (212)
T ss_dssp             HH------HSSHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCTT--CSSHHHHHHHHHHHHHT
T ss_pred             cc------cccccccccchhhhhhhccccc----ccccccccccccccccccc--cccchhHHHHHHhhhcc
Confidence            11      1122456778888888888775    3345568999998665432  35679999988877654

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=98.66  E-value=4.3e-07  Score=63.28  Aligned_cols=69  Identities=14%  Similarity=0.110  Sum_probs=53.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhh-----HHh--hhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKAT-----MAD--LEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~-----~~~--~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ||+|.||++++++|.++|++|++++|+...     .+.  ......+.++.+|++|.+++...+.       ..+.++++
T Consensus        10 GatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~-------~~~~~~~~   82 (312)
T d1qyda_          10 GGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------QVDVVISA   82 (312)
T ss_dssp             STTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------TCSEEEEC
T ss_pred             CCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------Ccchhhhh
Confidence            899999999999999999999999996431     111  1224678899999999877665543       55788888


Q ss_pred             CCC
Q 042185           74 AGV   76 (162)
Q Consensus        74 ag~   76 (162)
                      ++.
T Consensus        83 ~~~   85 (312)
T d1qyda_          83 LAG   85 (312)
T ss_dssp             CCC
T ss_pred             hhh
Confidence            875

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.60  E-value=9.8e-08  Score=66.51  Aligned_cols=138  Identities=14%  Similarity=0.206  Sum_probs=82.7

Q ss_pred             CCCCchHHHHHHHHHHCCC-eEEEEecCh--hhHHhhhcCCceeEEEeccCChHHHHHHHHHHHH--HcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDC-RVVATGRSK--ATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLE--KFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-~vi~~~r~~--~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~--~~~~id~vi~~ag   75 (162)
                      ||+|.||.+++++|+++|+ .|+.+++-.  .......+        .++.+..+.+...+....  .+...++++|.|+
T Consensus         6 GgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa   77 (307)
T d1eq2a_           6 GGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD--------LNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGA   77 (307)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHT--------SCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCS
T ss_pred             cCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccc--------cchhhhccchHHHHHHhhhhcccchhhhhhhcc
Confidence            8999999999999999997 587776322  11212211        122222222233333332  3356788999887


Q ss_pred             CCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC-----------CCCchhhhHhHHH
Q 042185           76 VQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP-----------GPWAGTYTASKAA  144 (162)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~y~~sKaa  144 (162)
                      .....   .   ...+...+.|+.+...+...+..    .+. ++++.||.....+           ..+...|+.+|.+
T Consensus        78 ~~~~~---~---~~~~~~~~~~~~~~~~~l~~~~~----~~i-~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~  146 (307)
T d1eq2a_          78 CSSTT---E---WDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFL  146 (307)
T ss_dssp             CCCTT---C---CCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHH
T ss_pred             ccccc---c---ccccccccccccccccccccccc----ccc-cccccccccccccccccccccccccccccccccccch
Confidence            53321   1   12344566777777777666533    222 4555555544322           2345679999999


Q ss_pred             HHHHHHHHHHHhc
Q 042185          145 LHSLTDTLRLELG  157 (162)
Q Consensus       145 ~~~l~~~l~~e~~  157 (162)
                      .+.+++.+..+..
T Consensus       147 ~e~~~~~~~~~~~  159 (307)
T d1eq2a_         147 FDEYVRQILPEAN  159 (307)
T ss_dssp             HHHHHHHHGGGCS
T ss_pred             hhhhccccccccc
Confidence            9999998877654

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.53  E-value=3e-06  Score=60.30  Aligned_cols=125  Identities=17%  Similarity=0.064  Sum_probs=78.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhH--HhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATM--ADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~--~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      ||+|.||.+++++|.++|++|+++.|+..+.  ........+.++.+|++|..++   ++.+   +...|.++.+.....
T Consensus        10 GatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~---~~~a---~~~~~~~~~~~~~~~   83 (350)
T d1xgka_          10 GATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPL---MDTL---FEGAHLAFINTTSQA   83 (350)
T ss_dssp             STTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHH---HHHH---HTTCSEEEECCCSTT
T ss_pred             CCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHH---HHHH---hcCCceEEeeccccc
Confidence            8999999999999999999999999986543  3334456789999999986543   2222   345677776654211


Q ss_pred             CCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC--CCCchhhhHhHHHHHHHHHH
Q 042185           79 VGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP--GPWAGTYTASKAALHSLTDT  151 (162)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~~~y~~sKaa~~~l~~~  151 (162)
                      .      .          ++.....++.++    .+.+..+++++||.....+  ......|..+|.....+.+.
T Consensus        84 ~------~----------~~~~~~~~~~aa----~~agv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~~~~~~~~  138 (350)
T d1xgka_          84 G------D----------EIAIGKDLADAA----KRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQ  138 (350)
T ss_dssp             S------C----------HHHHHHHHHHHH----HHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHT
T ss_pred             c------h----------hhhhhhHHHHHH----HHhCCCceEEEeeccccccCCcccchhhhhhHHHHHHHHHh
Confidence            1      1          111222233333    3344557788887654432  23344577778777665554

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.53  E-value=9.7e-13  Score=87.47  Aligned_cols=36  Identities=19%  Similarity=0.279  Sum_probs=32.6

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ   36 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~   36 (162)
                      ||+|+||+++|+.|+++|++|++.+|++++++++.+
T Consensus         7 gGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~   42 (212)
T d1jaya_           7 GGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAA   42 (212)
T ss_dssp             TTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHH
T ss_pred             eCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            788999999999999999999999999988776644

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.49  E-value=2.1e-06  Score=59.27  Aligned_cols=69  Identities=16%  Similarity=0.185  Sum_probs=53.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHh------h--hcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMAD------L--EQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~------~--~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      ||+|.||++++++|.++|++|++++|+......      .  .....+.++.+|+.+.......++       ..+.+++
T Consensus        10 GatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~~~vi~   82 (307)
T d1qyca_          10 GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-------NVDVVIS   82 (307)
T ss_dssp             STTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-------TCSEEEE
T ss_pred             CCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh-------hceeeee
Confidence            899999999999999999999999997543211      1  123567888999999887666553       4588888


Q ss_pred             CCCC
Q 042185           73 NAGV   76 (162)
Q Consensus        73 ~ag~   76 (162)
                      +++.
T Consensus        83 ~~~~   86 (307)
T d1qyca_          83 TVGS   86 (307)
T ss_dssp             CCCG
T ss_pred             cccc
Confidence            8874

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.99  E-value=7.2e-06  Score=50.39  Aligned_cols=68  Identities=15%  Similarity=0.234  Sum_probs=55.2

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |.|.+|+.+++.|.++|+.|++++++++..+++.++....++..|.++++.++.+      .....|.++....
T Consensus         7 G~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~------~i~~a~~vv~~t~   74 (132)
T d1lssa_           7 GIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDA------GIEDADMYIAVTG   74 (132)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHT------TTTTCSEEEECCS
T ss_pred             CCCHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhc------ChhhhhhhcccCC
Confidence            4689999999999999999999999999998887666778899999998866554      1235677777543

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.97  E-value=2.7e-05  Score=50.21  Aligned_cols=97  Identities=18%  Similarity=0.133  Sum_probs=61.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      ||+||+|...++.....|++|+.+.+++++.+.+..-..-.++.  -.+  ........+  ..+.+|+++.+.|...  
T Consensus        39 gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~vi~--~~~--~~~~~~~~~--~~~gvD~vid~vgg~~--  110 (176)
T d1xa0a2          39 GATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLA--RED--VMAERIRPL--DKQRWAAAVDPVGGRT--  110 (176)
T ss_dssp             STTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEE--CC-----------C--CSCCEEEEEECSTTTT--
T ss_pred             eccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhcccceeee--cch--hHHHHHHHh--hccCcCEEEEcCCchh--
Confidence            78999999999988899999999999988887776644444442  221  112222211  2247999999998521  


Q ss_pred             CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEeccccccCC
Q 042185           81 PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVGSVTVAAP  131 (162)
Q Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~  131 (162)
                               |..               .+..+  +.+|+++.++...+..+
T Consensus       111 ---------~~~---------------~l~~l--~~~Griv~~G~~~g~~~  135 (176)
T d1xa0a2         111 ---------LAT---------------VLSRM--RYGGAVAVSGLTGGAEV  135 (176)
T ss_dssp             ---------HHH---------------HHHTE--EEEEEEEECSCCSSSCC
T ss_pred             ---------HHH---------------HHHHh--CCCceEEEeecccCccc
Confidence                     222               22233  34689999988766554

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.75  E-value=0.00012  Score=46.50  Aligned_cols=74  Identities=19%  Similarity=0.175  Sum_probs=54.2

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcC-CccEEEECCCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFG-KIDVLVNNAGV   76 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~-~id~vi~~ag~   76 (162)
                      |+|++|...+..+...|++|+++++++++++.+++-..-..+..|-.+ ++.....+.+.+..| .+|++|.++|.
T Consensus        34 G~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~~~~~~~~-~~~~~~~~~~~~~~g~g~D~vid~~g~  108 (170)
T d1e3ja2          34 GAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAK-EEESSIIERIRSAIGDLPNVTIDCSGN  108 (170)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTT-SCHHHHHHHHHHHSSSCCSEEEECSCC
T ss_pred             cccccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEEEeccccc-cccchhhhhhhcccccCCceeeecCCC
Confidence            478999999998888999999999999998877664433344444333 344555666666554 68999999985

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.70  E-value=9.8e-05  Score=47.00  Aligned_cols=67  Identities=15%  Similarity=0.188  Sum_probs=47.6

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEE-eccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQE-LDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~-~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |+|.+|+.+|+.|+++|++|++++|+.++.+++.++....... .+..+.......+       ...|.++.+..
T Consensus         9 GaG~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i-------~~~~~~i~~~~   76 (182)
T d1e5qa1           9 GSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEV-------AKHDLVISLIP   76 (182)
T ss_dssp             CCSTTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHH-------TTSSEEEECSC
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhh-------hccceeEeecc
Confidence            4589999999999999999999999999999988765544443 3444444333332       24466665543

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.64  E-value=0.00026  Score=45.29  Aligned_cols=75  Identities=16%  Similarity=0.181  Sum_probs=56.4

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC--------------------CceeEEEeccCChHHHHHHHHHHH
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD--------------------PRFFVQELDVLSEQSVQNVLSNVL   61 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~--------------------~~~~~~~~D~~~~~~i~~~~~~~~   61 (162)
                      |-|-+|.++|+.|+++|++|++.+|++++.+++..+                    .....+...+.+.+.+..+.+.+.
T Consensus         9 GlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~~v~~~l~   88 (176)
T d2pgda2           9 GLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDNFIEKLV   88 (176)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHHHHHHHH
T ss_pred             eEhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHHHHHHHHH
Confidence            467899999999999999999999999887765331                    123445556677788888888887


Q ss_pred             HHcCCccEEEECCCC
Q 042185           62 EKFGKIDVLVNNAGV   76 (162)
Q Consensus        62 ~~~~~id~vi~~ag~   76 (162)
                      ....+-+++|.+.-.
T Consensus        89 ~~~~~g~iiid~sT~  103 (176)
T d2pgda2          89 PLLDIGDIIIDGGNS  103 (176)
T ss_dssp             HHCCTTCEEEECSCC
T ss_pred             hccccCcEEEecCcc
Confidence            766566677766543

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=9.4e-05  Score=47.30  Aligned_cols=71  Identities=15%  Similarity=0.174  Sum_probs=49.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|++|...+......|++|+.+++++++.+.+++-..-.+  +|.++.+-.+.+.+...  ...+|+++.+.|
T Consensus        36 Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~v--i~~~~~~~~~~i~~~t~--~~g~d~v~d~~g  106 (174)
T d1yb5a2          36 GASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEV--FNHREVNYIDKIKKYVG--EKGIDIIIEMLA  106 (174)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEE--EETTSTTHHHHHHHHHC--TTCEEEEEESCH
T ss_pred             eccccccccccccccccCcccccccccccccccccccCcccc--cccccccHHHHhhhhhc--cCCceEEeeccc
Confidence            678999999999888899999999998887776655333333  36666543333333321  135899998876

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.63  E-value=8.2e-05  Score=47.98  Aligned_cols=72  Identities=19%  Similarity=0.240  Sum_probs=52.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|++|...+......|++|+.+++++++.+.+.....-..+  |-.+.+..+.+.+...  ...+|+++.+.|.
T Consensus        37 ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi--~~~~~~~~~~~~~~~~--~~Gvd~v~D~vG~  108 (182)
T d1v3va2          37 AAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAF--NYKTVNSLEEALKKAS--PDGYDCYFDNVGG  108 (182)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEE--ETTSCSCHHHHHHHHC--TTCEEEEEESSCH
T ss_pred             eCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhc--ccccccHHHHHHHHhh--cCCCceeEEecCc
Confidence            7899999999999999999999999998888777665544443  4444444444443332  2369999999983

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.57  E-value=9.6e-05  Score=45.12  Aligned_cols=67  Identities=9%  Similarity=0.168  Sum_probs=52.7

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |.|-+|+.+++.|.++|+.|++++.+++..+++.+.. ...+.+|.++++.++.+      ...+.|.+|.+.+
T Consensus         7 G~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~-~~~~~gd~~~~~~l~~a------~i~~a~~vi~~~~   73 (134)
T d2hmva1           7 GLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYA-THAVIANATEENELLSL------GIRNFEYVIVAIG   73 (134)
T ss_dssp             CCSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTC-SEEEECCTTCTTHHHHH------TGGGCSEEEECCC
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhC-Ccceeeecccchhhhcc------CCccccEEEEEcC
Confidence            4678999999999999999999999999999887654 35666899998766554      1124577777665

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.49  E-value=0.00033  Score=45.11  Aligned_cols=69  Identities=19%  Similarity=0.240  Sum_probs=51.2

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhh-------cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLE-------QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~-------~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      |+||.|++++..|.+.|. +++++.|+.+..+++.       ..........|+.+.+++...+       ...|++||+
T Consensus        25 GaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~diiIN~   97 (182)
T d1vi2a1          25 GAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEAL-------ASADILTNG   97 (182)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHH-------HTCSEEEEC
T ss_pred             CCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhh-------cccceeccc
Confidence            578999999999999998 7899999876555432       2244556677888876554432       367999999


Q ss_pred             CCCC
Q 042185           74 AGVQ   77 (162)
Q Consensus        74 ag~~   77 (162)
                      ....
T Consensus        98 Tp~G  101 (182)
T d1vi2a1          98 TKVG  101 (182)
T ss_dssp             SSTT
T ss_pred             cCCc
Confidence            9764

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.46  E-value=0.00031  Score=44.24  Aligned_cols=74  Identities=16%  Similarity=0.229  Sum_probs=52.0

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC------------CceeEEEeccCChHHHHHHH---HHHHHHcCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------------PRFFVQELDVLSEQSVQNVL---SNVLEKFGK   66 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~------------~~~~~~~~D~~~~~~i~~~~---~~~~~~~~~   66 (162)
                      |.|-+|.++|+.|+++|++|++.+|+++..+++.+.            ....++-.=+.+.++++.++   +.+.....+
T Consensus         7 GlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~~~~~~   86 (161)
T d1vpda2           7 GLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKP   86 (161)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCT
T ss_pred             ehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchhhccCC
Confidence            468899999999999999999999999887766442            12344445566777888776   334444444


Q ss_pred             ccEEEECCC
Q 042185           67 IDVLVNNAG   75 (162)
Q Consensus        67 id~vi~~ag   75 (162)
                      =+++|.+.-
T Consensus        87 g~iiid~sT   95 (161)
T d1vpda2          87 GTVLIDMSS   95 (161)
T ss_dssp             TCEEEECSC
T ss_pred             CCEEEECCC
Confidence            455665543

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=0.00065  Score=43.07  Aligned_cols=72  Identities=22%  Similarity=0.241  Sum_probs=51.6

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcC-CccEEEECCCC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFG-KIDVLVNNAGV   76 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~-~id~vi~~ag~   76 (162)
                      |+|++|...+..+...|+ +|+++++++++++.+++-..-.++..+-.+..+   ..+.+....+ .+|++|.++|.
T Consensus        34 G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~---~~~~~~~~~g~g~Dvvid~~G~  107 (171)
T d1pl8a2          34 GAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQE---IARKVEGQLGCKPEVTIECTGA  107 (171)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHH---HHHHHHHHHTSCCSEEEECSCC
T ss_pred             CCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCccccccccccccc---ccccccccCCCCceEEEeccCC
Confidence            468999999999989999 799999999998877654444444444444433   3444444444 68999999985

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.37  E-value=0.0006  Score=43.70  Aligned_cols=71  Identities=13%  Similarity=0.080  Sum_probs=48.3

Q ss_pred             CCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHc--CCccEEEECCCC
Q 042185            3 QGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF--GKIDVLVNNAGV   76 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--~~id~vi~~ag~   76 (162)
                      +|++|...+..+...|+ +|+++++++++++.+.+-..-.++  |..+. +.....+.+.+..  ..+|++|.+.|.
T Consensus        37 aG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi--~~~~~-~~~~~~~~i~~~~~~~g~Dvvid~vG~  110 (182)
T d1vj0a2          37 AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTL--NRRET-SVEERRKAIMDITHGRGADFILEATGD  110 (182)
T ss_dssp             CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEE--ETTTS-CHHHHHHHHHHHTTTSCEEEEEECSSC
T ss_pred             CCccchhheecccccccccccccccccccccccccccceEEE--ecccc-chHHHHHHHHHhhCCCCceEEeecCCc
Confidence            48999999999889998 799999999988877654333333  43332 2333333333332  258999999985

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.35  E-value=0.0003  Score=45.06  Aligned_cols=69  Identities=25%  Similarity=0.247  Sum_probs=48.9

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHc--CCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKF--GKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--~~id~vi~~ag   75 (162)
                      ||+|++|...+..+...|++|++++++.++.+.+++...-.+  .|-.+++ +.   +++.+..  ..+|+++.+.|
T Consensus        33 ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~v--i~~~~~~-~~---~~v~~~t~~~g~d~v~d~~g  103 (183)
T d1pqwa_          33 SATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYV--GDSRSVD-FA---DEILELTDGYGVDVVLNSLA  103 (183)
T ss_dssp             TTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEE--EETTCST-HH---HHHHHHTTTCCEEEEEECCC
T ss_pred             CCCCCcccccchhhccccccceeeeccccccccccccccccc--ccCCccC-HH---HHHHHHhCCCCEEEEEeccc
Confidence            789999999999888889999999999888777765433333  3444543 32   2333322  36999999987

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.35  E-value=0.00017  Score=46.10  Aligned_cols=72  Identities=15%  Similarity=0.225  Sum_probs=50.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|++|...+......|++|+.+++++++.+.+.+-..-++  +|-++++-.+++ .++- ....+|+++.+.|.
T Consensus        36 ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa~~v--i~~~~~d~~~~v-~~~t-~g~g~d~v~d~~g~  107 (179)
T d1qora2          36 AAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQV--INYREEDLVERL-KEIT-GGKKVRVVYDSVGR  107 (179)
T ss_dssp             STTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEE--EETTTSCHHHHH-HHHT-TTCCEEEEEECSCG
T ss_pred             ccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCCeEE--EECCCCCHHHHH-HHHh-CCCCeEEEEeCccH
Confidence            788999999999888889999999999998877765443333  366554433333 2221 12368999998874

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.34  E-value=0.00081  Score=42.31  Aligned_cols=73  Identities=15%  Similarity=0.168  Sum_probs=49.7

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCC-------------ceeEEEeccCChHHHHHHHHHHHHHcCCcc
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDP-------------RFFVQELDVLSEQSVQNVLSNVLEKFGKID   68 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~-------------~~~~~~~D~~~~~~i~~~~~~~~~~~~~id   68 (162)
                      |.|-+|.++++.|.++|++|+..+|+++..+++.+..             ...++-.- ...++++.+++++.....+=.
T Consensus         7 G~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIila-vp~~~~~~vl~~l~~~l~~~~   85 (165)
T d2f1ka2           7 GLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLC-TPIQLILPTLEKLIPHLSPTA   85 (165)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEEC-SCHHHHHHHHHHHGGGSCTTC
T ss_pred             eecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeeccccccccccccc-CcHhhhhhhhhhhhhhccccc
Confidence            5688999999999999999999999988766654321             11122111 235678888888876554445


Q ss_pred             EEEECCC
Q 042185           69 VLVNNAG   75 (162)
Q Consensus        69 ~vi~~ag   75 (162)
                      +++...+
T Consensus        86 iv~~~~s   92 (165)
T d2f1ka2          86 IVTDVAS   92 (165)
T ss_dssp             EEEECCS
T ss_pred             ceeeccc
Confidence            5555544

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.33  E-value=0.00024  Score=44.86  Aligned_cols=76  Identities=13%  Similarity=0.235  Sum_probs=51.6

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      |.|++|..+++.|..+|+ ++.++.|+.++.+++..+....+.     +.+++...       ....|+||++.+...+ 
T Consensus        31 GaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~~-----~~~~~~~~-------l~~~Divi~atss~~~-   97 (159)
T d1gpja2          31 GAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAV-----RFDELVDH-------LARSDVVVSATAAPHP-   97 (159)
T ss_dssp             SCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEEC-----CGGGHHHH-------HHTCSEEEECCSSSSC-
T ss_pred             CCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcccc-----cchhHHHH-------hccCCEEEEecCCCCc-
Confidence            359999999999999998 699999998888777654433332     22333332       2367999999985322 


Q ss_pred             CCCCCChHHHHHH
Q 042185           81 PLAEVPLSAMEQT   93 (162)
Q Consensus        81 ~~~~~~~~~~~~~   93 (162)
                         -++.+.++..
T Consensus        98 ---ii~~~~i~~~  107 (159)
T d1gpja2          98 ---VIHVDDVREA  107 (159)
T ss_dssp             ---CBCHHHHHHH
T ss_pred             ---cccHhhhHHH
Confidence               2455555533

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.17  E-value=0.0023  Score=40.13  Aligned_cols=75  Identities=11%  Similarity=0.109  Sum_probs=51.2

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC------------CceeEEEeccCChHHHHHHHHH---HHHHcCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------------PRFFVQELDVLSEQSVQNVLSN---VLEKFGK   66 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~------------~~~~~~~~D~~~~~~i~~~~~~---~~~~~~~   66 (162)
                      |.|-+|.++|+.|.++|++|.+.+|+.+..+.+...            .....+..-+.+.++++.++..   +.....+
T Consensus         8 GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~~~~l~~   87 (162)
T d3cuma2           8 GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAP   87 (162)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCHHHHSCT
T ss_pred             EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccccccCCC
Confidence            467899999999999999999999998876665432            2344555556777777777654   3333333


Q ss_pred             ccEEEECCCC
Q 042185           67 IDVLVNNAGV   76 (162)
Q Consensus        67 id~vi~~ag~   76 (162)
                      =+++|.+.-.
T Consensus        88 g~iiid~st~   97 (162)
T d3cuma2          88 GTLVLECSTI   97 (162)
T ss_dssp             TCEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            3556655543

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.14  E-value=0.00087  Score=42.64  Aligned_cols=67  Identities=13%  Similarity=0.253  Sum_probs=45.5

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC----CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD----PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      |+||.+++++..|.+.+.+|.++.|+.++.+++.+.    ..+.....|-.              ...+.|++||++...
T Consensus        25 GaGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~--------------~~~~~diiIN~tp~g   90 (171)
T d1p77a1          25 GAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSI--------------PLQTYDLVINATSAG   90 (171)
T ss_dssp             CCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC--------------CCSCCSEEEECCCC-
T ss_pred             CCcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccc--------------cccccceeeeccccc
Confidence            688999999999998888999999999887766542    33334333311              124789999999876


Q ss_pred             CCCCC
Q 042185           78 CVGPL   82 (162)
Q Consensus        78 ~~~~~   82 (162)
                      .....
T Consensus        91 ~~~~~   95 (171)
T d1p77a1          91 LSGGT   95 (171)
T ss_dssp             -----
T ss_pred             ccccc
Confidence            44433

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.13  E-value=0.00095  Score=42.37  Aligned_cols=66  Identities=17%  Similarity=0.177  Sum_probs=45.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+|++|...+......|++|+.+++++++.+.+.+-..-..+  |..+  ..    ++. .....+|++|.+.|
T Consensus        35 ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~~~i--~~~~--~~----~~~-~~~~g~D~v~d~~G  100 (171)
T d1iz0a2          35 AAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAA--TYAE--VP----ERA-KAWGGLDLVLEVRG  100 (171)
T ss_dssp             STTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEE--EGGG--HH----HHH-HHTTSEEEEEECSC
T ss_pred             eccccchhhhhhhhcccccccccccccccccccccccccceee--ehhh--hh----hhh-hccccccccccccc
Confidence            6889999999998888999999999988877766553222222  3322  11    122 22357999999876

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=97.13  E-value=0.0017  Score=41.31  Aligned_cols=73  Identities=18%  Similarity=0.227  Sum_probs=49.9

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC-----------------------CceeEEEeccCChHHHHHHHH
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD-----------------------PRFFVQELDVLSEQSVQNVLS   58 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~-----------------------~~~~~~~~D~~~~~~i~~~~~   58 (162)
                      |.|-+|.+++++|+++|++|.+.+|++++.+++.++                       .....+..-+.+...+...+.
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAATDSTIE   87 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHHHHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchhhhhhh
Confidence            467899999999999999999999999887765331                       112233334445556666777


Q ss_pred             HHHHHcCCccEEEECC
Q 042185           59 NVLEKFGKIDVLVNNA   74 (162)
Q Consensus        59 ~~~~~~~~id~vi~~a   74 (162)
                      .....+.+=++++.+.
T Consensus        88 ~~~~~~~~~~iii~~s  103 (178)
T d1pgja2          88 QLKKVFEKGDILVDTG  103 (178)
T ss_dssp             HHHHHCCTTCEEEECC
T ss_pred             hhhhhccccceecccC
Confidence            7666555555665544

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.11  E-value=0.00097  Score=42.22  Aligned_cols=60  Identities=23%  Similarity=0.254  Sum_probs=44.0

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      |+||.+++++..|.+.|+ +|.++.|+.++.+.+........+.    +..            ....|++||+....
T Consensus        24 GaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~----~~~------------~~~~DliINaTpiG   84 (167)
T d1npya1          24 GSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYIN----SLE------------NQQADILVNVTSIG   84 (167)
T ss_dssp             CSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEES----CCT------------TCCCSEEEECSSTT
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhh----ccc------------ccchhhheeccccC
Confidence            679999999999999998 7999999998877775533332221    100            13579999998764

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.05  E-value=0.0007  Score=43.00  Aligned_cols=65  Identities=18%  Similarity=0.238  Sum_probs=45.2

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCc--eeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPR--FFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQC   78 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   78 (162)
                      |+||-+++++..|.+.|++|.++.|+.++.+++.....  ......+..+.            .....|++||+.....
T Consensus        25 GaGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~------------~~~~~dliIN~Tp~G~   91 (170)
T d1nyta1          25 GAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDEL------------EGHEFDLIINATSSGI   91 (170)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGG------------TTCCCSEEEECCSCGG
T ss_pred             CCcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccccc------------cccccceeecccccCc
Confidence            57899999999999999999999999988777654211  11222222111            1236899999987643

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.01  E-value=0.0065  Score=37.33  Aligned_cols=107  Identities=20%  Similarity=0.179  Sum_probs=59.9

Q ss_pred             CCCCchHHHHHHHHHHCCC--eEEEEecChhhHHhh--hcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDC--RVVATGRSKATMADL--EQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~--~vi~~~r~~~~~~~~--~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      ||+|.+|.+++..|+.+|.  +++++|.++.+.+..  ...........-+ ...+..+.+       ..-|++|..+|.
T Consensus         7 GA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~-~~~~~~~~~-------~~aDivVitag~   78 (144)
T d1mlda1           7 GASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYL-GPEQLPDCL-------KGCDVVVIPAGV   78 (144)
T ss_dssp             TTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEE-SGGGHHHHH-------TTCSEEEECCSC
T ss_pred             CCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEE-cCCChHHHh-------CCCCEEEECCCc
Confidence            6789999999999998885  799999876543322  1111122222222 222222222       356999999996


Q ss_pred             CCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-CCCeEEEecc
Q 042185           77 QCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKIINVGS  125 (162)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS  125 (162)
                      ... +  .++..   ..++.|..-.    +.+.+.+.+. .++.++++|.
T Consensus        79 ~~~-~--g~sR~---~ll~~N~~i~----~~i~~~i~~~~p~~iiivvtN  118 (144)
T d1mlda1          79 PRK-P--GMTRD---DLFNTNATIV----ATLTAACAQHCPDAMICIISN  118 (144)
T ss_dssp             CCC-T--TCCGG---GGHHHHHHHH----HHHHHHHHHHCTTSEEEECSS
T ss_pred             CCC-C--CCCcc---hHHHHHHHHH----HHHHHHHHhcCCCeEEEEecC
Confidence            322 2  22322   2345555544    4444444443 3567777664

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.99  E-value=8.1e-05  Score=47.76  Aligned_cols=35  Identities=23%  Similarity=0.291  Sum_probs=30.8

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ   36 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~   36 (162)
                      |+|.+|.+++..|+++|++|.+.+|+++..+.+..
T Consensus         8 GaG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           8 GLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            56899999999999999999999999887776543

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=96.92  E-value=0.0015  Score=42.04  Aligned_cols=75  Identities=11%  Similarity=0.126  Sum_probs=47.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHh----hhcCCceeEEEeccCChHHHHHHHHHHHH-HcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMAD----LEQDPRFFVQELDVLSEQSVQNVLSNVLE-KFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~----~~~~~~~~~~~~D~~~~~~i~~~~~~~~~-~~~~id~vi~~ag   75 (162)
                      ||+|++|.+.+......|++||.+.|+.+..++    +++-..-.++..|-.+..+....+.++.+ ..+.+|+++.+.|
T Consensus        37 ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg  116 (189)
T d1gu7a2          37 GGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVG  116 (189)
T ss_dssp             CTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSC
T ss_pred             CCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEeccccchhHHHHHHHHHHhhccCCceEEEECCC
Confidence            688999999988877889999998877654433    22223333443332223334444444443 3457999999887

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.74  E-value=0.0018  Score=40.85  Aligned_cols=72  Identities=8%  Similarity=0.165  Sum_probs=48.9

Q ss_pred             CCCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |++|++|...+..+...|+ +|+++++++++.+.+++-..-.+  .|.++.+..+.+.+...  .+.+|++|.++|.
T Consensus        35 G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~--i~~~~~~~~~~~~~~~~--~~~~d~vid~~g~  107 (170)
T d1jvba2          35 GAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYV--INASMQDPLAEIRRITE--SKGVDAVIDLNNS  107 (170)
T ss_dssp             TTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEE--EETTTSCHHHHHHHHTT--TSCEEEEEESCCC
T ss_pred             eccccceeeeeecccccccccccccccchhhHHHHHHcCCcee--eccCCcCHHHHHHHHhh--cccchhhhccccc
Confidence            6789999999999888886 89999999988777655322233  34444444444433221  1358999999985

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.71  E-value=0.003  Score=39.09  Aligned_cols=68  Identities=4%  Similarity=-0.097  Sum_probs=50.5

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhh---cCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLE---QDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~---~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |.|.+|..+++.|.++|.+|++++.+++......   ....+.++..|.++++.++++-      ..+-|.+|.+.+
T Consensus        10 G~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~------i~~a~~vi~~~~   80 (153)
T d1id1a_          10 GHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAG------IDRCRAILALSD   80 (153)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHT------TTTCSEEEECSS
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhc------cccCCEEEEccc
Confidence            5678999999999999999999999876433222   2356888999999987655441      235678877764

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.66  E-value=0.0069  Score=37.80  Aligned_cols=68  Identities=18%  Similarity=0.177  Sum_probs=46.0

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |.|++|...+..+...|++|+.+++++++++.+.+-....++  |.++.+..+.+.+    ..+..+.+|.+++
T Consensus        35 GaG~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga~~~i--~~~~~~~~~~~~~----~~~g~~~~i~~~~  102 (166)
T d1llua2          35 GIGGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTV--NARQEDPVEAIQR----DIGGAHGVLVTAV  102 (166)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEE--ETTTSCHHHHHHH----HHSSEEEEEECCS
T ss_pred             eccccHHHHHHHHHHcCCccceecchhhHHHhhhccCccccc--cccchhHHHHHHH----hhcCCcccccccc
Confidence            468999998888888899999999999988877664433333  5555444444332    2345666666555

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.62  E-value=0.0016  Score=35.64  Aligned_cols=35  Identities=23%  Similarity=0.323  Sum_probs=30.1

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhh
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLE   35 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~   35 (162)
                      ||+||+|......+...|++|+.+.+++++.+.+.
T Consensus        39 gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~   73 (77)
T d1o8ca2          39 GASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (77)
T ss_dssp             STTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             eCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence            78999999999988888999999999887766543

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.62  E-value=0.0017  Score=41.35  Aligned_cols=71  Identities=11%  Similarity=0.099  Sum_probs=47.2

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+|++|...+..+...|+ +|+.+++++++++.+.+-...++  +|..+.+..+.+ .+... ...+|++|.++|.
T Consensus        35 GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~--i~~~~~~~~~~v-~~~t~-g~G~D~vid~~g~  106 (174)
T d1jqba2          35 GIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDI--LNYKNGHIEDQV-MKLTN-GKGVDRVIMAGGG  106 (174)
T ss_dssp             CCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEE--ECGGGSCHHHHH-HHHTT-TSCEEEEEECSSC
T ss_pred             cCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCcccc--ccccchhHHHHH-HHHhh-ccCcceEEEccCC
Confidence            458999999988888898 79999999988777655333333  344443322222 22211 1249999999985

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.57  E-value=0.029  Score=36.12  Aligned_cols=36  Identities=19%  Similarity=0.262  Sum_probs=32.6

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD   37 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~   37 (162)
                      |.|.+|..+|..|+++|++|+..|.|.+..+++.+.
T Consensus         7 GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g   42 (202)
T d1mv8a2           7 GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQG   42 (202)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT
T ss_pred             CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhccc
Confidence            578999999999999999999999999988887654

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.54  E-value=0.01  Score=36.46  Aligned_cols=72  Identities=13%  Similarity=0.132  Sum_probs=47.5

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhh-hcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADL-EQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~-~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||.|-+|..+++.|.++|++|.+.+|+.....+. ..+........+   ..++..++.++.....+=.+++..+.
T Consensus        16 Gg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~v~~~~~---~~~~~~v~~~~~~~~~~~~iiiD~~S   88 (152)
T d2pv7a2          16 GGYGKLGGLFARYLRASGYPISILDREDWAVAESILANADVVIVSVP---INLTLETIERLKPYLTENMLLADLTS   88 (152)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHTTCSEEEECSC---GGGHHHHHHHHGGGCCTTSEEEECCS
T ss_pred             cCCCHHHHHHHHHHHHcCCCcEecccccccccchhhhhccccccccc---hhhheeeeecccccccCCceEEEecc
Confidence            4579999999999999999999999987654443 333444443333   34566677776554433344555544

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.54  E-value=0.013  Score=36.00  Aligned_cols=28  Identities=29%  Similarity=0.387  Sum_probs=25.0

Q ss_pred             CCCCchHHHHHHHHHHCCC--eEEEEecCh
Q 042185            1 CSQGGIGHALARAFAASDC--RVVATGRSK   28 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~--~vi~~~r~~   28 (162)
                      ||+|.+|.+++..|+.+|.  +++++|+++
T Consensus         7 GA~G~VG~~~a~~l~~~~l~~el~L~D~~~   36 (145)
T d1hyea1           7 GASGRVGSATALLLAKEPFMKDLVLIGREH   36 (145)
T ss_dssp             TTTSHHHHHHHHHHHTCTTCCEEEEEECGG
T ss_pred             CCCChHHHHHHHHHHhCCcccccccccchh
Confidence            6789999999999999984  899999875

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.47  E-value=0.0034  Score=39.74  Aligned_cols=70  Identities=11%  Similarity=0.176  Sum_probs=46.8

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |.|++|...+..+...|+ .|+++++++++++.+++-....+  +|..+.+ +.+.+.++.  .+.+|++|.+.|.
T Consensus        36 G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~--i~~~~~~-~~~~i~~~t--~gg~D~vid~~G~  106 (174)
T d1f8fa2          36 GAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHV--INSKTQD-PVAAIKEIT--DGGVNFALESTGS  106 (174)
T ss_dssp             SCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEE--EETTTSC-HHHHHHHHT--TSCEEEEEECSCC
T ss_pred             CCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEE--EeCCCcC-HHHHHHHHc--CCCCcEEEEcCCc
Confidence            358999999988888888 45677888888777655333333  3554433 333333332  2579999999985

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.40  E-value=0.0057  Score=38.83  Aligned_cols=71  Identities=13%  Similarity=0.160  Sum_probs=49.6

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHH-HHHHHHHHHHHcCCccEEEECCCC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQS-VQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~-i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |.||+|...+..+...|+ +|+.+++++++++.+.+-....++  |..+.+. .+.+.+..  ....+|.+|.+.|.
T Consensus        37 G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~i--n~~~~~~~~~~~~~~~--~g~G~d~vi~~~g~  109 (176)
T d1d1ta2          37 GLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECI--SPKDSTKPISEVLSEM--TGNNVGYTFEVIGH  109 (176)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEE--CGGGCSSCHHHHHHHH--HTSCCCEEEECSCC
T ss_pred             CCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEE--CccccchHHHHHHHHh--ccccceEEEEeCCc
Confidence            468999999999999996 899999999998877664444444  2222222 33333322  22479999999985

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.33  E-value=0.0036  Score=40.13  Aligned_cols=71  Identities=20%  Similarity=0.263  Sum_probs=45.7

Q ss_pred             CCCCchHHHHHHHHHHCCCe-EEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            1 CSQGGIGHALARAFAASDCR-VVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ||+||+|...++.....|++ |+.+++++++..++..+.....+ .|..++ ++.+.++++..  ..+|+++.+.|
T Consensus        38 gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~v-i~~~~~-~~~~~~~~~~~--~GvDvv~D~vG  109 (187)
T d1vj1a2          38 GAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAA-VNYKTG-NVAEQLREACP--GGVDVYFDNVG  109 (187)
T ss_dssp             STTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEE-EETTSS-CHHHHHHHHCT--TCEEEEEESSC
T ss_pred             CCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEE-eeccch-hHHHHHHHHhc--cCceEEEecCC
Confidence            78999999999888888985 55567776666655443222222 355444 34444444422  35999999987

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.32  E-value=0.0045  Score=38.90  Aligned_cols=68  Identities=21%  Similarity=0.105  Sum_probs=45.0

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      |.|++|...+..+...|++|+++++++++++.+.+-..-.++  |..+.++.   .   .+..+..|.++.+.+..
T Consensus        35 GaG~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~~~i--~~~~~~~~---~---~~~~~~~d~vi~~~~~~  102 (168)
T d1piwa2          35 GLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYI--ATLEEGDW---G---EKYFDTFDLIVVCASSL  102 (168)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEE--EGGGTSCH---H---HHSCSCEEEEEECCSCS
T ss_pred             CCCCcchhHHHHhhhccccccccccchhHHHHhhccCCcEEe--eccchHHH---H---HhhhcccceEEEEecCC
Confidence            358999998887778899999999999888877653322333  22222111   1   22335789999988754

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.29  E-value=0.01  Score=37.39  Aligned_cols=71  Identities=18%  Similarity=0.248  Sum_probs=49.5

Q ss_pred             CCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            3 QGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      .||+|...+..+...|+ +|+.+++++++.+.+.+......+. +-+..+.+....+...  .+.+|++|.+.|.
T Consensus        37 aGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~-~~~~~~~~~~~~~~~~--~~G~D~vid~~G~  108 (176)
T d2jhfa2          37 LGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVN-PQDYKKPIQEVLTEMS--NGGVDFSFEVIGR  108 (176)
T ss_dssp             CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEEC-GGGCSSCHHHHHHHHT--TSCBSEEEECSCC
T ss_pred             CCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEe-cCCchhHHHHHHHHHh--cCCCCEEEecCCc
Confidence            47899999999999986 8999999999888776654443332 1122233455544442  2479999999985

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.29  E-value=0.023  Score=35.35  Aligned_cols=74  Identities=8%  Similarity=0.080  Sum_probs=50.1

Q ss_pred             CCCchHHHHHHHHHHCCC--eEEEEecChhhHHhhhcCCc---------------eeEEEeccCChHHHHHHHHHHHHHc
Q 042185            2 SQGGIGHALARAFAASDC--RVVATGRSKATMADLEQDPR---------------FFVQELDVLSEQSVQNVLSNVLEKF   64 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~--~vi~~~r~~~~~~~~~~~~~---------------~~~~~~D~~~~~~i~~~~~~~~~~~   64 (162)
                      |.|-||.++++.|.+.|.  +|+..|++++.++.+.....               ..++-+- +..+++..+++++....
T Consensus         8 G~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila-~p~~~~~~vl~~l~~~~   86 (171)
T d2g5ca2           8 GVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS-SPVRTFREIAKKLSYIL   86 (171)
T ss_dssp             SCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEEC-SCHHHHHHHHHHHHHHS
T ss_pred             ccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhcccccccccc-CCchhhhhhhhhhhccc
Confidence            568999999999999985  78999999887776644311               1121111 33567888888887766


Q ss_pred             CCccEEEECCCC
Q 042185           65 GKIDVLVNNAGV   76 (162)
Q Consensus        65 ~~id~vi~~ag~   76 (162)
                      .+=.+++.+.+.
T Consensus        87 ~~~~ii~d~~s~   98 (171)
T d2g5ca2          87 SEDATVTDQGSV   98 (171)
T ss_dssp             CTTCEEEECCSC
T ss_pred             cccccccccccc
Confidence            544555555554

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=96.25  E-value=0.0013  Score=43.74  Aligned_cols=69  Identities=19%  Similarity=0.257  Sum_probs=45.1

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      .||-+|.++|+++..+|++|.++......    .....+..  ..+...++....+.   +.+..-|++|++|.+...
T Consensus        30 SSGk~G~aiA~~~~~~Ga~V~li~g~~~~----~~p~~~~~--~~~~t~~~m~~~~~---~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          30 SSGKMGFAIAAAAARRGANVTLVSGPVSL----PTPPFVKR--VDVMTALEMEAAVN---ASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEECSCCC----CCCTTEEE--EECCSHHHHHHHHH---HHGGGCSEEEECCBCCSE
T ss_pred             CcHHHHHHHHHHHHHcCCchhhhhccccc----Cccccccc--ceehhhHHHHHHHH---hhhccceeEeeeechhhh
Confidence            58899999999999999999887664321    11112333  34444444444443   344577999999988543

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=96.24  E-value=0.027  Score=34.47  Aligned_cols=98  Identities=15%  Similarity=0.131  Sum_probs=53.9

Q ss_pred             CCchHHHHHHHHHHCC--CeEEEEecChhhHHhhh-------c-CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            3 QGGIGHALARAFAASD--CRVVATGRSKATMADLE-------Q-DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g--~~vi~~~r~~~~~~~~~-------~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      .|.+|..+|..|+.+|  .+|+++|+++++.+...       . .........|   ++           ....-|++|.
T Consensus        13 aG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d---~~-----------~~~~adivvi   78 (146)
T d1ez4a1          13 DGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGE---YS-----------DCKDADLVVI   78 (146)
T ss_dssp             CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECC---GG-----------GGTTCSEEEE
T ss_pred             CCHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeecc---HH-----------HhccccEEEE
Confidence            5889999999999987  48999999986543211       1 1223333333   22           1236699999


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEec
Q 042185           73 NAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVG  124 (162)
Q Consensus        73 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~is  124 (162)
                      ++|.....   .   ..-...+..|..    +++...+.+.+.. ++.++++|
T Consensus        79 tag~~~~~---g---~~r~~l~~~N~~----i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          79 TAGAPQKP---G---ESRLDLVNKNLN----ILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             CCCC----------------CHHHHHH----HHHHHHHHHHHTTCCSEEEECS
T ss_pred             ecccccCC---C---CCHHHHHHHHHH----HHHHHHHHHhhcCCCcEEEEeC
Confidence            99864321   1   122233344443    4455555554443 45555555

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.23  E-value=0.016  Score=37.06  Aligned_cols=32  Identities=13%  Similarity=0.198  Sum_probs=28.1

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMAD   33 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~   33 (162)
                      |+|-||..+|..|+.+|++|++.|++++.+++
T Consensus        11 GaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~   42 (186)
T d1wdka3          11 GAGIMGGGIAYQSASKGTPILMKDINEHGIEQ   42 (186)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEEECSSHHHHHH
T ss_pred             CcCHHHHHHHHHHHhCCCeEEEEECCHHHHhh
Confidence            45789999999999999999999999876554

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.23  E-value=0.021  Score=33.34  Aligned_cols=62  Identities=18%  Similarity=0.213  Sum_probs=48.7

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEE
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLV   71 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi   71 (162)
                      |+|=+|+-++....+.|+++++.+.+++....   ...-.++..|..|.+.+..+....     .+|++.
T Consensus        18 GgGQL~rMla~aA~~lG~~v~v~d~~~~~PA~---~va~~~i~~~~~d~~~l~~~~~~~-----~~DviT   79 (111)
T d1kjqa2          18 GSGELGKEVAIECQRLGVEVIAVDRYADAPAM---HVAHRSHVINMLDGDALRRVVELE-----KPHYIV   79 (111)
T ss_dssp             SCSHHHHHHHHHHHTTTCEEEEEESSTTCGGG---GGSSEEEECCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             eCCHHHHHHHHHHHHCCCEEEEEcCCCCCchh---hcCCeEEECCCCCHHHHHHHHHhh-----CCceEE
Confidence            56789999999999999999999987654222   133567778999999888887776     778884

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.23  E-value=0.02  Score=36.12  Aligned_cols=72  Identities=17%  Similarity=0.222  Sum_probs=50.3

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+|+||...+..+...|+ +|+++++++++++.+++-....++...-. .+.++...+...  .+.+|++|.++|.
T Consensus        36 G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~~~-~~~~~~~~~~~~--~~G~d~vie~~G~  108 (174)
T d1e3ia2          36 GLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPREL-DKPVQDVITELT--AGGVDYSLDCAGT  108 (174)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGC-SSCHHHHHHHHH--TSCBSEEEESSCC
T ss_pred             CCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCccc-hhhhhhhHhhhh--cCCCcEEEEeccc
Confidence            469999999999999998 68899999988877766444444432222 223444444432  3589999999985

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.15  E-value=0.0031  Score=40.74  Aligned_cols=33  Identities=24%  Similarity=0.329  Sum_probs=29.2

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADL   34 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~   34 (162)
                      |+|-+|..+|..++.+|++|++.|++++.+++.
T Consensus        11 GaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a   43 (192)
T d1f0ya2          11 GGGLMGAGIAQVAAATGHTVVLVDQTEDILAKS   43 (192)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CcCHHHHHHHHHHHhCCCcEEEEECChHHHHHH
Confidence            468899999999999999999999998766654

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.07  E-value=0.0056  Score=38.57  Aligned_cols=70  Identities=19%  Similarity=0.198  Sum_probs=47.8

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |.|++|...+..+...|+ +|+.+++++++++.+.+-....++  |.. .+.++...+...  ...+|++|.++|.
T Consensus        40 GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i--~~~-~~~~~~~~~~~~--~~g~d~vid~~g~  110 (172)
T d1h2ba2          40 GVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVV--DAR-RDPVKQVMELTR--GRGVNVAMDFVGS  110 (172)
T ss_dssp             CCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEE--ETT-SCHHHHHHHHTT--TCCEEEEEESSCC
T ss_pred             CCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceee--cCc-ccHHHHHHHhhC--CCCceEEEEecCc
Confidence            468999998888887886 778889999888877665444443  333 234444443221  1359999999985

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=95.95  E-value=0.0059  Score=38.85  Aligned_cols=43  Identities=21%  Similarity=0.185  Sum_probs=34.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEE
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQ   43 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~   43 (162)
                      ||+||+|...++.....|++|+.+++++++.+.+.+...-.++
T Consensus        39 gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lGad~vi   81 (177)
T d1o89a2          39 GASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRVL   81 (177)
T ss_dssp             STTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTEEEEE
T ss_pred             EccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhcccccc
Confidence            7999999999998888999999999998887766553333333

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=95.91  E-value=0.018  Score=36.28  Aligned_cols=71  Identities=18%  Similarity=0.244  Sum_probs=49.5

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChH-HHHHHHHHHHHHcCCccEEEECCCC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQ-SVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |.|++|...+..+...|+ +|+.+++++++++.+++-....++  |.++.+ .+.......  ..+..|++|-++|.
T Consensus        35 GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i--~~~~~d~~~~~~~~~~--~~~G~d~vid~~g~  107 (174)
T d1p0fa2          35 GLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECL--NPKDYDKPIYEVICEK--TNGGVDYAVECAGR  107 (174)
T ss_dssp             CCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEE--CGGGCSSCHHHHHHHH--TTSCBSEEEECSCC
T ss_pred             CCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEE--cCCCchhHHHHHHHHh--cCCCCcEEEEcCCC
Confidence            358999999999999997 799999999998887765544444  332222 233333332  23479999999885

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.87  E-value=0.025  Score=35.39  Aligned_cols=71  Identities=15%  Similarity=0.186  Sum_probs=49.1

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChH-HHHHHHHHHHHHcCCccEEEECCCC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQ-SVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |.||+|...+..+...|+ +|+.+++++++++.+.+-..-.++  |.++.+ ..+.......  .+.+|+++.+.|.
T Consensus        36 G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~i--n~~~~~~~~~~~~~~~~--~~G~d~vid~~G~  108 (175)
T d1cdoa2          36 GLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFV--NPNDHSEPISQVLSKMT--NGGVDFSLECVGN  108 (175)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEE--CGGGCSSCHHHHHHHHH--TSCBSEEEECSCC
T ss_pred             ecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEE--cCCCcchhHHHHHHhhc--cCCcceeeeecCC
Confidence            467899999999988877 799999999988887765544554  332222 2333333332  2479999999985

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.53  E-value=0.023  Score=38.95  Aligned_cols=26  Identities=35%  Similarity=0.340  Sum_probs=23.3

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRS   27 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~   27 (162)
                      .||-.|.++|+.+..+|+.|+++.+.
T Consensus        44 SSGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CchHHHHHHHHHHHHcCCEEEEEecC
Confidence            58899999999999999999988654

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=95.47  E-value=0.016  Score=36.17  Aligned_cols=66  Identities=20%  Similarity=0.205  Sum_probs=45.1

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |.|++|...+..+...|+++++++++.++.+.+.+-..-.+  +|..+.+..       ......+|.+|.+.|.
T Consensus        38 GaG~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGad~~--i~~~~~~~~-------~~~~~~~D~vid~~g~  103 (168)
T d1uufa2          38 GIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEV--VNSRNADEM-------AAHLKSFDFILNTVAA  103 (168)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEE--EETTCHHHH-------HTTTTCEEEEEECCSS
T ss_pred             ccchHHHHHHHHhhcccccchhhccchhHHHHHhccCCcEE--EECchhhHH-------HHhcCCCceeeeeeec
Confidence            35899999998888899999999998887765544222222  354444322       1223479999999985

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.47  E-value=0.016  Score=35.86  Aligned_cols=31  Identities=16%  Similarity=0.154  Sum_probs=27.2

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHH
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMA   32 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~   32 (162)
                      |.|.||..++..|++.|++|.+++|+.+..+
T Consensus         7 GaG~iG~~~a~~L~~~G~~V~~~~r~~~~~~   37 (167)
T d1ks9a2           7 GCGALGQLWLTALCKQGHEVQGWLRVPQPYC   37 (167)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCSEE
T ss_pred             CcCHHHHHHHHHHHHCCCceEEEEcCHHHhh
Confidence            4589999999999999999999999876444

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.41  E-value=0.062  Score=33.11  Aligned_cols=68  Identities=21%  Similarity=0.238  Sum_probs=43.2

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |+|++|...+..+...|++|+++++++++++.+++-....+  .|-++.+ ....+.+.   ....+.+|.+++
T Consensus        35 G~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga~~~--~~~~~~~-~~~~~~~~---~~~~~~~v~~~~  102 (168)
T d1rjwa2          35 GIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLV--VNPLKED-AAKFMKEK---VGGVHAAVVTAV  102 (168)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEE--ECTTTSC-HHHHHHHH---HSSEEEEEESSC
T ss_pred             ecccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCccee--cccccch-hhhhcccc---cCCCceEEeecC
Confidence            46899999888888899999999999998887765332222  2333332 22222222   234556666665

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.38  E-value=0.13  Score=31.04  Aligned_cols=99  Identities=15%  Similarity=0.085  Sum_probs=57.0

Q ss_pred             CCCCchHHHHHHHHHHCC--CeEEEEecChhhHHhhhc--------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEE
Q 042185            1 CSQGGIGHALARAFAASD--CRVVATGRSKATMADLEQ--------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVL   70 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g--~~vi~~~r~~~~~~~~~~--------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~v   70 (162)
                      |+ |.+|.+++..++.++  .++++.|.+++..+....        .........   ++++           ...-|++
T Consensus         7 Ga-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~---~~~~-----------~~~adiv   71 (140)
T d1a5za1           7 GL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAG---DYAD-----------LKGSDVV   71 (140)
T ss_dssp             CC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEEC---CGGG-----------GTTCSEE
T ss_pred             Cc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCC---cHHH-----------hcCCCEE
Confidence            54 889999999999876  389999999765442211        122222222   2221           2356999


Q ss_pred             EECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-CCCeEEEec
Q 042185           71 VNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKIINVG  124 (162)
Q Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~is  124 (162)
                      |.++|.....   ..+..+   .+..|..    +++.+.+.+.+. +++.++++|
T Consensus        72 vitag~~~~~---g~~r~d---l~~~N~~----I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          72 IVAAGVPQKP---GETRLQ---LLGRNAR----VMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             EECCCCCCCS---SCCHHH---HHHHHHH----HHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEecccccCC---Ccchhh---hhccccc----hHHHHHHHHHhcCCCcEEEEeC
Confidence            9999974321   233322   3333432    456666666554 455666655

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=95.30  E-value=0.063  Score=32.75  Aligned_cols=103  Identities=15%  Similarity=0.175  Sum_probs=55.7

Q ss_pred             CCchHHHHHHHHHHCCC--eEEEEecChhhHHhhh-------c--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEE
Q 042185            3 QGGIGHALARAFAASDC--RVVATGRSKATMADLE-------Q--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLV   71 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~--~vi~~~r~~~~~~~~~-------~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi   71 (162)
                      .|.+|..++..|+.+|.  ++++.|.++++.+...       .  ........   .++++           .-.-|++|
T Consensus         9 aG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~---~d~~~-----------l~~adiVV   74 (146)
T d1hyha1           9 LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI---NDWAA-----------LADADVVI   74 (146)
T ss_dssp             CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE---SCGGG-----------GTTCSEEE
T ss_pred             cCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceec---cCHHH-----------hccccEEE
Confidence            58999999999998874  7999999987543221       1  12222222   22221           22569999


Q ss_pred             ECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-CCCeEEEecc
Q 042185           72 NNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKIINVGS  125 (162)
Q Consensus        72 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS  125 (162)
                      .++|.....  .+.....-...++.|.    .+++.+.+.+.+. .++.++++|-
T Consensus        75 itaG~~~~~--~~~~g~~R~~l~~~N~----~i~~~i~~~i~~~~p~aivivvtN  123 (146)
T d1hyha1          75 STLGNIKLQ--QDNPTGDRFAELKFTS----SMVQSVGTNLKESGFHGVLVVISN  123 (146)
T ss_dssp             ECCSCGGGT--C-------CTTHHHHH----HHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             Eeccccccc--cccCCccHHHHHHHHH----HHHHHHHHHHhhcCCCeEEEEecC
Confidence            999964211  0000011112233343    3556666666544 3566666663

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=95.28  E-value=0.045  Score=33.64  Aligned_cols=73  Identities=12%  Similarity=0.062  Sum_probs=46.8

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC-----------CceeEEEeccCChHHHHHHHHHHHHHcCCccEE
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD-----------PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVL   70 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~-----------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~v   70 (162)
                      |-|-+|.++|++|.+.|+.+ ...|+.++..+...+           .....+-..+.+.+++....+.+.+...+-..+
T Consensus         7 GlG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~~~~~i   85 (156)
T d2cvza2           7 GLGAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLREGTYW   85 (156)
T ss_dssp             CCSTTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCCTTEEE
T ss_pred             eHHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhccccccccccccc
Confidence            46789999999999888755 577776655443221           223344445566677887777776655455555


Q ss_pred             EECCC
Q 042185           71 VNNAG   75 (162)
Q Consensus        71 i~~ag   75 (162)
                      |.+.-
T Consensus        86 id~sT   90 (156)
T d2cvza2          86 VDATS   90 (156)
T ss_dssp             EECSC
T ss_pred             ccccc
Confidence            55553

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.26  E-value=0.04  Score=32.89  Aligned_cols=68  Identities=10%  Similarity=0.206  Sum_probs=50.0

Q ss_pred             CCCCchHHHHHHHHHHCCCeEE-EEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVV-ATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi-~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |++|-+|+++++.+.++|++++ ..+++...  ..   .... +-.|+|.++.....++.+.+.  ++.+|+-..|.
T Consensus         7 G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~--~~---~~~D-VvIDFS~p~~~~~~l~~~~~~--~~p~ViGTTG~   75 (128)
T d1vm6a3           7 GYSGRMGQEIQKVFSEKGHELVLKVDVNGVE--EL---DSPD-VVIDFSSPEALPKTVDLCKKY--RAGLVLGTTAL   75 (128)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEEETTEEE--EC---SCCS-EEEECSCGGGHHHHHHHHHHH--TCEEEECCCSC
T ss_pred             CCCCHHHHHHHHHHhcCCCeEEEEECCCcHH--Hh---ccCC-EEEEecCHHHHHHHHHHHHhc--CCCEEEEcCCC
Confidence            7899999999999999999765 44554321  11   1233 347999999999999998775  56678877775

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.26  E-value=0.15  Score=31.05  Aligned_cols=100  Identities=12%  Similarity=0.089  Sum_probs=56.2

Q ss_pred             CCCCchHHHHHHHHHHCCC--eEEEEecChhhHHhh-------hc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccE
Q 042185            1 CSQGGIGHALARAFAASDC--RVVATGRSKATMADL-------EQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDV   69 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~--~vi~~~r~~~~~~~~-------~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~   69 (162)
                      | .|.+|..++..|+.+|.  +++++|++++..+-.       ..  .........|   ++           ....-|+
T Consensus        13 G-aG~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d---~~-----------~l~daDv   77 (148)
T d1ldna1          13 G-AGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGD---YD-----------DCRDADL   77 (148)
T ss_dssp             C-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECC---GG-----------GTTTCSE
T ss_pred             C-cCHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECC---HH-----------Hhcccee
Confidence            5 48999999999998874  799999998763321       11  1222233322   22           1235699


Q ss_pred             EEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhh-cCCCeEEEecc
Q 042185           70 LVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY-RKKGKIINVGS  125 (162)
Q Consensus        70 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~isS  125 (162)
                      +|.++|.....   ..+..   ..+..|..    +++.+.+.+.+ .+.+.++++|-
T Consensus        78 vvitag~~~~~---~~~R~---dl~~~N~~----i~~~i~~~i~~~~p~a~~ivvtN  124 (148)
T d1ldna1          78 VVICAGANQKP---GETRL---DLVDKNIA----IFRSIVESVMASGFQGLFLVATN  124 (148)
T ss_dssp             EEECCSCCCCT---TTCSG---GGHHHHHH----HHHHHHHHHHHHTCCSEEEECSS
T ss_pred             EEEeccccccc---Ccchh---HHHHHHHH----HHHHHHHHHHhhCCCceEEEecC
Confidence            99999974321   11211   12223332    44555555544 34566776664

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=95.23  E-value=0.024  Score=31.74  Aligned_cols=61  Identities=13%  Similarity=0.150  Sum_probs=38.8

Q ss_pred             CCchHHHHHHHHHHCCCeEEEEecChh--hHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            3 QGGIGHALARAFAASDCRVVATGRSKA--TMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~~vi~~~r~~~--~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      -|.-|.++|+.|.++|++|++.|.+..  ..+++..  ...+...+. +.+    .       +..+|.+|..+|+.
T Consensus        13 lG~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~--~~~~~~~~~-~~~----~-------~~~~d~vi~SPGi~   75 (93)
T d2jfga1          13 LGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPE--AVERHTGSL-NDE----W-------LMAADLIVASPGIA   75 (93)
T ss_dssp             CSHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCT--TSCEEESBC-CHH----H-------HHHCSEEEECTTSC
T ss_pred             ECHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhh--ccceeeccc-chh----h-------hccCCEEEECCCCC
Confidence            467799999999999999999998543  2222322  222322222 111    1       12569999999984

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=95.15  E-value=0.011  Score=35.37  Aligned_cols=65  Identities=6%  Similarity=-0.018  Sum_probs=47.1

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |.|.+|..+++.|  +|.+|++++.+++..+.... ..+.++.+|.++++.++++      ...+-+.+|.+..
T Consensus         7 G~g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~~-~~~~~i~Gd~~~~~~L~~a------~i~~A~~vi~~~~   71 (129)
T d2fy8a1           7 GWSESTLECLREL--RGSEVFVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKA------NVRGARAVIVNLE   71 (129)
T ss_dssp             SCCHHHHHHHHTS--CGGGEEEEESCTTHHHHHHH-TTCEEEESCTTSHHHHHHT------TCTTCSEEEECCS
T ss_pred             CCCHHHHHHHHHH--cCCCCEEEEcchHHHHHHHh-cCccccccccCCHHHHHHh------hhhcCcEEEEecc
Confidence            4678999999998  45678888998887776644 4577888999998766553      1235677776553

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=95.15  E-value=0.0072  Score=38.05  Aligned_cols=68  Identities=18%  Similarity=0.153  Sum_probs=44.3

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHH-HHH-HcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSN-VLE-KFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-~~~-~~~~id~vi~~ag~   76 (162)
                      ||+||+|...++.....|++|+.+.++.++.+.+.+-..-.++  |   .++   ...+ ... ..+.+|+++.+.|.
T Consensus        31 gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGad~vi--~---~~~---~~~~~~~~~~~~gvd~vid~vgg  100 (167)
T d1tt7a2          31 GATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVI--S---RED---VYDGTLKALSKQQWQGAVDPVGG  100 (167)
T ss_dssp             STTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEE--E---HHH---HCSSCCCSSCCCCEEEEEESCCT
T ss_pred             CCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhcccceE--e---ccc---hhchhhhcccCCCceEEEecCcH
Confidence            7899999999987777899999999998877766553322222  1   111   1111 111 12368999988874

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.14  E-value=0.011  Score=36.36  Aligned_cols=35  Identities=20%  Similarity=0.335  Sum_probs=30.1

Q ss_pred             CCCchHHHHHHHHHHCC-CeEEEEecChhhHHhhhc
Q 042185            2 SQGGIGHALARAFAASD-CRVVATGRSKATMADLEQ   36 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g-~~vi~~~r~~~~~~~~~~   36 (162)
                      |.|-+|.++++.|.+.| ++|.+.+|++++.+++.+
T Consensus         7 G~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~   42 (152)
T d1yqga2           7 GGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEK   42 (152)
T ss_dssp             CCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHH
T ss_pred             cCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhh
Confidence            56899999999998887 799999999988777654

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=95.13  E-value=0.16  Score=30.74  Aligned_cols=101  Identities=17%  Similarity=0.159  Sum_probs=58.6

Q ss_pred             CCCCchHHHHHHHHHHCCC--eEEEEecCh--hhHH----hhhc----CCceeEEEeccCChHHHHHHHHHHHHHcCCcc
Q 042185            1 CSQGGIGHALARAFAASDC--RVVATGRSK--ATMA----DLEQ----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKID   68 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~--~vi~~~r~~--~~~~----~~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id   68 (162)
                      |++|.+|.++|..+..++.  ++++.|.+.  +..+    ++..    .........|   +++           ...-|
T Consensus         7 GaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~---~~~-----------~~~aD   72 (142)
T d1o6za1           7 GAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG---YED-----------TAGSD   72 (142)
T ss_dssp             TTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC---GGG-----------GTTCS
T ss_pred             CCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCC---HHH-----------hhhcC
Confidence            6789999999999999975  799998642  2222    1111    2233333332   221           23669


Q ss_pred             EEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEecc
Q 042185           69 VLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVGS  125 (162)
Q Consensus        69 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS  125 (162)
                      ++|.++|.... +  ..+.   ...++.|..    +++.+.+.+.+.. ++.++++|-
T Consensus        73 iVvitaG~~~~-~--g~~R---~dl~~~N~~----I~~~i~~~i~~~~p~~i~ivvtN  120 (142)
T d1o6za1          73 VVVITAGIPRQ-P--GQTR---IDLAGDNAP----IMEDIQSSLDEHNDDYISLTTSN  120 (142)
T ss_dssp             EEEECCCCCCC-T--TCCH---HHHHHHHHH----HHHHHHHHHHTTCSCCEEEECCS
T ss_pred             EEEEecccccc-c--CCch---hhHHHHHHH----HHHHHHHHHHhcCCCceEEEecC
Confidence            99999996322 1  2332   334455544    5566666665543 566666653

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.00  E-value=0.046  Score=34.24  Aligned_cols=75  Identities=16%  Similarity=0.140  Sum_probs=49.5

Q ss_pred             CCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC--CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 042185            3 QGGIGHALARAFAASDCRVVATGRSKATMADLEQD--PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCVG   80 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~   80 (162)
                      .|--|..-+.-....|+.|.+.|.+.++++++...  ..+.+   -..+.+.+++.+.       .-|+||.++-+....
T Consensus        40 aGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~---~~~~~~~l~~~~~-------~aDivI~aalipG~~  109 (168)
T d1pjca1          40 GGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVEL---LYSNSAEIETAVA-------EADLLIGAVLVPGRR  109 (168)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEE---EECCHHHHHHHHH-------TCSEEEECCCCTTSS
T ss_pred             CChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhccccee---ehhhhhhHHHhhc-------cCcEEEEeeecCCcc
Confidence            45568888888889999999999999988877553  12222   2344444544433       459999999765443


Q ss_pred             CCCCCCh
Q 042185           81 PLAEVPL   87 (162)
Q Consensus        81 ~~~~~~~   87 (162)
                      ...-++.
T Consensus       110 aP~lIt~  116 (168)
T d1pjca1         110 APILVPA  116 (168)
T ss_dssp             CCCCBCH
T ss_pred             cCeeecH
Confidence            3333443

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=94.91  E-value=0.13  Score=31.05  Aligned_cols=99  Identities=18%  Similarity=0.178  Sum_probs=52.7

Q ss_pred             CCchHHHHHHHHHHCCC--eEEEEecChhhHHhh----hcC----CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            3 QGGIGHALARAFAASDC--RVVATGRSKATMADL----EQD----PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~--~vi~~~r~~~~~~~~----~~~----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      .|.+|..++..++.++.  +++++|++++..+..    ..-    .......   .++           +....-|++|.
T Consensus         9 aG~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~---~~~-----------~~~~~adivvi   74 (142)
T d1y6ja1           9 AGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA---GDY-----------SDVKDCDVIVV   74 (142)
T ss_dssp             CSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG-----------GGGTTCSEEEE
T ss_pred             CCHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEee---CcH-----------HHhCCCceEEE
Confidence            48999999999999875  799999987653221    110    1111111   112           12345699999


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhh-cCCCeEEEecc
Q 042185           73 NAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAY-RKKGKIINVGS  125 (162)
Q Consensus        73 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~isS  125 (162)
                      ++|.... +  ..+.   ...+..|..    +++.+.+.+.+ .+++.++++|-
T Consensus        75 tag~~~~-~--~~~r---~~l~~~N~~----i~~~i~~~i~~~~p~ai~ivvtN  118 (142)
T d1y6ja1          75 TAGANRK-P--GETR---LDLAKKNVM----IAKEVTQNIMKYYNHGVILVVSN  118 (142)
T ss_dssp             CCCC---------CH---HHHHHHHHH----HHHHHHHHHHHHCCSCEEEECSS
T ss_pred             ecccccC-c--Ccch---hHHhhHHHH----HHHHHHHHhhccCCCceEEEecC
Confidence            9996422 1  1222   234445554    44555555554 34566666664

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=94.87  E-value=0.21  Score=30.83  Aligned_cols=99  Identities=15%  Similarity=0.143  Sum_probs=57.9

Q ss_pred             CCchHHHHHHHHHHCCC--eEEEEecChhhHHhhh----c-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEE
Q 042185            3 QGGIGHALARAFAASDC--RVVATGRSKATMADLE----Q-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLV   71 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~--~vi~~~r~~~~~~~~~----~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi   71 (162)
                      .|.+|..++..|+.+|.  +++++|++++..+...    .     ........   .++++           ...=|++|
T Consensus        28 aG~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~---~d~~~-----------~~~adiVV   93 (160)
T d1i0za1          28 VGQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVAD---KDYSV-----------TANSKIVV   93 (160)
T ss_dssp             CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEEC---SSGGG-----------GTTCSEEE
T ss_pred             CCHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEec---cchhh-----------cccccEEE
Confidence            48999999999999985  7999999976543211    1     11111122   22221           23569999


Q ss_pred             ECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-CCCeEEEecc
Q 042185           72 NNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKIINVGS  125 (162)
Q Consensus        72 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS  125 (162)
                      .+||.... +  ..+..   ..+..|..    +++.+.+.+.+. .++-++++|-
T Consensus        94 itAg~~~~-~--g~tR~---~l~~~N~~----i~~~i~~~i~~~~p~aiiivvtN  138 (160)
T d1i0za1          94 VTAGVRQQ-E--GESRL---NLVQRNVN----VFKFIIPQIVKYSPDCIIIVVSN  138 (160)
T ss_dssp             ECCSCCCC-T--TCCGG---GGHHHHHH----HHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EecCCccc-c--CcchH---HHHHHHHH----HHHHHHHHHHhcCCCcEEEEeCC
Confidence            99997432 1  22322   22233333    556666666554 4566777664

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=94.87  E-value=0.021  Score=35.73  Aligned_cols=72  Identities=18%  Similarity=0.201  Sum_probs=47.2

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |.||+|...+..+...|+ .|+.+++++++++.+++-..-.++..+ .+.+.++..++...  .+.+|++|.+.|.
T Consensus        36 GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~-~~~~~~~~~~~~~~--~~g~D~vid~~G~  108 (176)
T d2fzwa2          36 GLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ-DFSKPIQEVLIEMT--DGGVDYSFECIGN  108 (176)
T ss_dssp             CCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG-GCSSCHHHHHHHHT--TSCBSEEEECSCC
T ss_pred             cchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC-chhhHHHHHHHHHc--CCCCcEeeecCCC
Confidence            346999999988888897 678888888877766553333333221 12234555544442  2479999999984

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.82  E-value=0.12  Score=31.32  Aligned_cols=100  Identities=10%  Similarity=0.042  Sum_probs=55.8

Q ss_pred             CCchHHHHHHHHHHCCC--eEEEEecChhhHHhh-------hcC--CceeEEEeccCChHHHHHHHHHHHHHcCCccEEE
Q 042185            3 QGGIGHALARAFAASDC--RVVATGRSKATMADL-------EQD--PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLV   71 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~--~vi~~~r~~~~~~~~-------~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi   71 (162)
                      +|.+|.+++..++.+|.  +++++|.+++..+-.       ...  ........  .|++           ....-|++|
T Consensus         8 aG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~~-----------~~~~adiVv   74 (142)
T d1ojua1           8 AGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS-----------LLKGSEIIV   74 (142)
T ss_dssp             CSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGG-----------GGTTCSEEE
T ss_pred             cCHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCHH-----------HhccccEEE
Confidence            58999999999998874  799999998764321       111  11122211  1122           123669999


Q ss_pred             ECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-CCCeEEEecc
Q 042185           72 NNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKIINVGS  125 (162)
Q Consensus        72 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS  125 (162)
                      ..+|.....   ..+.   ...+..|..    +.+...+.+.+. .++.++++|-
T Consensus        75 itag~~~~~---g~~r---~~l~~~n~~----i~~~i~~~i~~~~p~aivivvtN  119 (142)
T d1ojua1          75 VTAGLARKP---GMTR---LDLAHKNAG----IIKDIAKKIVENAPESKILVVTN  119 (142)
T ss_dssp             ECCCCCCCS---SCCH---HHHHHHHHH----HHHHHHHHHHTTSTTCEEEECSS
T ss_pred             EeccccCCC---CCch---HHHHHHhhH----HHHHHHHHHHhhCCCcEEEEecC
Confidence            999864321   2232   233333443    445555555543 3556666653

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.81  E-value=0.07  Score=34.13  Aligned_cols=72  Identities=17%  Similarity=0.172  Sum_probs=47.5

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      |+|++|...+......|+ +|+++++++++++.+.+-....+  .|-.+. ++...+.++. .....|++|.+.|..
T Consensus        33 GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~--~~~~~~-~~~~~i~~~t-~g~g~D~vid~vG~~  105 (195)
T d1kola2          33 GAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIA--DLSLDT-PLHEQIAALL-GEPEVDCAVDAVGFE  105 (195)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEE--ETTSSS-CHHHHHHHHH-SSSCEEEEEECCCTT
T ss_pred             CcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEE--EeCCCc-CHHHHHHHHh-CCCCcEEEEECcccc
Confidence            358999888888777887 89999999988877765443322  233333 3433333332 223689999999853

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.80  E-value=0.22  Score=30.71  Aligned_cols=99  Identities=17%  Similarity=0.176  Sum_probs=56.3

Q ss_pred             CCchHHHHHHHHHHCCC--eEEEEecChhhHHhh----hc---C--CceeEEEeccCChHHHHHHHHHHHHHcCCccEEE
Q 042185            3 QGGIGHALARAFAASDC--RVVATGRSKATMADL----EQ---D--PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLV   71 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~--~vi~~~r~~~~~~~~----~~---~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi   71 (162)
                      .|.+|..+|..|+.+|.  ++++.|++++..+..    ..   .  ........|   ++           ....-|++|
T Consensus        27 aG~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d---~~-----------~~~~adivv   92 (159)
T d2ldxa1          27 VGDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKD---YN-----------VSANSKLVI   92 (159)
T ss_dssp             CSHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESS---GG-----------GGTTEEEEE
T ss_pred             CCHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccc---hh-----------hhccccEEE
Confidence            58999999999999875  799999997654321    11   1  111122222   22           223669999


Q ss_pred             ECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-CCCeEEEecc
Q 042185           72 NNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKIINVGS  125 (162)
Q Consensus        72 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS  125 (162)
                      .++|......   .+..+   .++.|    ..+.+.+.+.+.+. .++.++++|-
T Consensus        93 itag~~~~~~---~~R~d---ll~~N----~~i~~~i~~~i~~~~p~~ivivvtN  137 (159)
T d2ldxa1          93 ITAGARMVSG---QTRLD---LLQRN----VAIMKAIVPGVIQNSPDCKIIVVTN  137 (159)
T ss_dssp             ECCSCCCCTT---TCSSC---TTHHH----HHHHHHHTTTHHHHSTTCEEEECSS
T ss_pred             EecccccCCC---CCHHH---HHHHH----HHHHHHHHHHHhccCCCeEEEEeCC
Confidence            9998743221   12111   12223    23456666666544 4566666664

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=94.77  E-value=0.18  Score=31.86  Aligned_cols=76  Identities=18%  Similarity=0.079  Sum_probs=46.6

Q ss_pred             CCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChH---------------HHHHHHHHHHHHcCCc
Q 042185            3 QGGIGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQ---------------SVQNVLSNVLEKFGKI   67 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~---------------~i~~~~~~~~~~~~~i   67 (162)
                      .|-.|..-+.-...-|++|.+.|.+.++++++++... .++..+..+.+               ..+..-+.+.+...+-
T Consensus        37 aGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~-~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~~l~~~l~~a  115 (183)
T d1l7da1          37 VGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGG-KFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVKT  115 (183)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTC-EECCC-----------------------CCHHHHHHHHHTTC
T ss_pred             CcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhc-ceEEEeccccccccccccchhhcCHHHHHHHHHHHHHHHHhh
Confidence            4567888888888999999999999988888765321 12222211111               1122233344445688


Q ss_pred             cEEEECCCCCCC
Q 042185           68 DVLVNNAGVQCV   79 (162)
Q Consensus        68 d~vi~~ag~~~~   79 (162)
                      |++|..+-+...
T Consensus       116 DlVI~talipG~  127 (183)
T d1l7da1         116 DIAITTALIPGK  127 (183)
T ss_dssp             SEEEECCCCTTS
T ss_pred             hhheeeeecCCc
Confidence            999999976544

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.65  E-value=0.065  Score=34.43  Aligned_cols=27  Identities=15%  Similarity=0.309  Sum_probs=24.2

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecCh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSK   28 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~   28 (162)
                      |.|.||+.+++.+..-|++|+..++..
T Consensus        50 G~G~IG~~va~~l~~fg~~V~~~d~~~   76 (197)
T d1j4aa1          50 GTGHIGQVFMQIMEGFGAKVITYDIFR   76 (197)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccccchhHHHhHhhhcccccccCccc
Confidence            578999999999999999999998754

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=94.61  E-value=0.16  Score=31.06  Aligned_cols=103  Identities=17%  Similarity=0.143  Sum_probs=54.6

Q ss_pred             CCCCchHHHHHHHHHHCCC---------eEEEEecChhhHHhhhc----C--CceeEEEeccCChHHHHHHHHHHHHHcC
Q 042185            1 CSQGGIGHALARAFAASDC---------RVVATGRSKATMADLEQ----D--PRFFVQELDVLSEQSVQNVLSNVLEKFG   65 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~---------~vi~~~r~~~~~~~~~~----~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~   65 (162)
                      ||+|.+|.+++..|+..+.         +++..+++.+.++....    .  .........  +.+         .+.+.
T Consensus        11 GA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---------~~~~~   79 (154)
T d1y7ta1          11 GAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEAT--DDP---------KVAFK   79 (154)
T ss_dssp             STTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE--SCH---------HHHTT
T ss_pred             CCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccC--Cch---------hhhcc
Confidence            7899999999999998652         22333444444443211    1  122222222  211         12234


Q ss_pred             CccEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-C-CCeEEEec
Q 042185           66 KIDVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-K-KGKIINVG  124 (162)
Q Consensus        66 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~-~~~iv~is  124 (162)
                      .-|++|.++|....   ...+.+++   +..|+.    +++.+.+.+.+. + .+.++++|
T Consensus        80 ~advViitaG~~~~---pg~~r~dl---~~~N~~----i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          80 DADYALLVGAAPRK---AGMERRDL---LQVNGK----IFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             TCSEEEECCCCCCC---TTCCHHHH---HHHHHH----HHHHHHHHHHHHSCTTCEEEECS
T ss_pred             cccEEEeecCcCCC---CCCcHHHH---HHHHHH----HHHHHHHHHHHhCCCCcEEEEec
Confidence            67999999997422   23444443   333443    455555555542 3 35555555

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.57  E-value=0.013  Score=37.66  Aligned_cols=34  Identities=18%  Similarity=0.184  Sum_probs=29.9

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLE   35 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~   35 (162)
                      |+|..|.+++..|+++|++|.+.+|+++..+++.
T Consensus        14 GaG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~   47 (189)
T d1n1ea2          14 GSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVN   47 (189)
T ss_dssp             CCSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHh
Confidence            5788999999999999999999999988776553

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.56  E-value=0.017  Score=35.52  Aligned_cols=35  Identities=11%  Similarity=0.320  Sum_probs=30.5

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ   36 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~   36 (162)
                      |+|-+|.++++.|.+.|+++++.+|+.++.+++.+
T Consensus         7 G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~   41 (152)
T d2ahra2           7 GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAE   41 (152)
T ss_dssp             CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHH
T ss_pred             eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcc
Confidence            57899999999999999999999999887776543

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.51  E-value=0.084  Score=31.77  Aligned_cols=71  Identities=21%  Similarity=0.305  Sum_probs=49.2

Q ss_pred             CCCCchHHHHHHHHHHC-CCeEE-EEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            1 CSQGGIGHALARAFAAS-DCRVV-ATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~-g~~vi-~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |++|-+|+++++...+. ++.++ .+++..+ +.... ..... +-.|+|.++.....++.+.+.  .+..|+-..|+
T Consensus         6 Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~~~~~-~~~~D-vvIDFS~p~~~~~~~~~~~~~--~~~~ViGTTG~   78 (135)
T d1yl7a1           6 GAKGKVGATMVRAVAAADDLTLSAELDAGDP-LSLLT-DGNTE-VVIDFTHPDVVMGNLEFLIDN--GIHAVVGTTGF   78 (135)
T ss_dssp             TTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-THHHH-TTTCS-EEEECCCTTTHHHHHHHHHHT--TCEEEECCCCC
T ss_pred             CCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-hhhhc-cccCC-EEEEcccHHHHHHHHHHHHhc--CCCEEEecccc
Confidence            78999999999998765 56764 4455332 22221 12333 347999999999999998764  56678777775

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=94.46  E-value=0.075  Score=29.93  Aligned_cols=61  Identities=15%  Similarity=0.218  Sum_probs=38.9

Q ss_pred             CCchH-HHHHHHHHHCCCeEEEEecChh-hHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            3 QGGIG-HALARAFAASDCRVVATGRSKA-TMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         3 ~~giG-~~ia~~l~~~g~~vi~~~r~~~-~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      -+|+| .++|+.|.++|+.|...|++.. ..+.+.+. .+.+...+-  ++           ...+.|.+|...++.
T Consensus        16 igG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~-Gi~v~~g~~--~~-----------~i~~~d~vV~S~AI~   78 (96)
T d1p3da1          16 IGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQA-GAKIYIGHA--EE-----------HIEGASVVVVSSAIK   78 (96)
T ss_dssp             TTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHT-TCEEEESCC--GG-----------GGTTCSEEEECTTSC
T ss_pred             ECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHC-CCeEEECCc--cc-----------cCCCCCEEEECCCcC
Confidence            46777 6779999999999999998643 33344333 333333222  11           123679999998874

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=94.44  E-value=0.092  Score=33.72  Aligned_cols=86  Identities=16%  Similarity=0.243  Sum_probs=49.9

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChh----------hHHhhhcCCceeEEEeccCChHH---HHHHHHHHHHHcCCcc
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKA----------TMADLEQDPRFFVQELDVLSEQS---VQNVLSNVLEKFGKID   68 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~----------~~~~~~~~~~~~~~~~D~~~~~~---i~~~~~~~~~~~~~id   68 (162)
                      |.|.||+.+++.+..-|++|+..++...          .++++..+..+..+.+-+++...   =++.+..+     +.+
T Consensus        52 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~~l~~~~D~v~~~~plt~~T~~li~~~~l~~m-----k~~  126 (199)
T d1dxya1          52 GTGHIGQVAIKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLM-----KPG  126 (199)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCSSCCTTCEECCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHS-----CTT
T ss_pred             ecccccccccccccccceeeeccCCccchhhhcchhHHHHHHHHHhcccceeeecccccccccccHHHhhcc-----CCc
Confidence            5789999999999999999999998533          22223333556666666655431   12233333     445


Q ss_pred             EEEECCCCCCCCCCCCCChHHHHHHHHhh
Q 042185           69 VLVNNAGVQCVGPLAEVPLSAMEQTFNTN   97 (162)
Q Consensus        69 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n   97 (162)
                      .++.|++-.   .+  ++.+.+.+.++.+
T Consensus       127 a~lIN~aRG---~v--vde~aL~~aL~~g  150 (199)
T d1dxya1         127 AIVINTARP---NL--IDTQAMLSNLKSG  150 (199)
T ss_dssp             EEEEECSCT---TS--BCHHHHHHHHHTT
T ss_pred             eEEEecccH---hh--hhhHHHHHHHhcC
Confidence            554444422   12  4555655555443

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.39  E-value=0.02  Score=36.26  Aligned_cols=26  Identities=23%  Similarity=0.349  Sum_probs=24.0

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRS   27 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~   27 (162)
                      |+|..|.++|..|+++|.+|.+.+|.
T Consensus         7 GaG~~GtalA~~la~~g~~V~l~~r~   32 (180)
T d1txga2           7 GAGAMGSALSVPLVDNGNEVRIWGTE   32 (180)
T ss_dssp             SCCHHHHHHHHHHHHHCCEEEEECCG
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEEec
Confidence            57899999999999999999999884

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=94.16  E-value=0.11  Score=35.83  Aligned_cols=67  Identities=19%  Similarity=0.221  Sum_probs=43.1

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC------CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ++|+++.+    ++..+.+|+.+|.+++.++.++..      .++.++..|..+      +.+...+...++|.|+.++.
T Consensus       155 gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~------~~~~~~~~~~~fD~Vi~DpP  224 (318)
T d1wxxa2         155 YAGGFALH----LALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFD------LLRRLEKEGERFDLVVLDPP  224 (318)
T ss_dssp             TTTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHH------HHHHHHHTTCCEEEEEECCC
T ss_pred             CCcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHH------HhhhhHhhhcCCCEEEEcCC
Confidence            34555443    344466999999998877766432      356677766633      33444444568999999986


Q ss_pred             CCC
Q 042185           76 VQC   78 (162)
Q Consensus        76 ~~~   78 (162)
                      ...
T Consensus       225 ~~~  227 (318)
T d1wxxa2         225 AFA  227 (318)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            543

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=94.13  E-value=0.3  Score=29.39  Aligned_cols=99  Identities=18%  Similarity=0.134  Sum_probs=54.2

Q ss_pred             CCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhc---------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            3 QGGIGHALARAFAASDC-RVVATGRSKATMADLEQ---------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~---------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      .|.+|.++|..|+.++. ++++.|.+++..+....         .....+...  .|++           ....-|++|.
T Consensus         9 aG~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~-----------~~~~advvvi   75 (142)
T d1uxja1           9 AGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYA-----------DTANSDVIVV   75 (142)
T ss_dssp             CSHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG-----------GGTTCSEEEE
T ss_pred             CCHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHH-----------HhcCCCEEEE
Confidence            58999999999998875 89999988765443211         111222211  1111           1235699999


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-CCCeEEEec
Q 042185           73 NAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKIINVG  124 (162)
Q Consensus        73 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~is  124 (162)
                      ++|.....   ..+.   ...+..|.    .+++...+.+.+. +++.++++|
T Consensus        76 tag~~~~~---~~~r---~dl~~~N~----~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          76 TSGAPRKP---GMSR---EDLIKVNA----DITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             CCSCC---------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECS
T ss_pred             eeeccCCc---Ccch---hHHHhHHH----HHHHHHHHHHhccCCCceEEEeC
Confidence            99964321   1221   22333443    3566666666654 355666555

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.07  E-value=0.039  Score=32.51  Aligned_cols=29  Identities=14%  Similarity=0.210  Sum_probs=25.6

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKAT   30 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~   30 (162)
                      |+|.||.++|..|++.|++|.++.++..-
T Consensus        30 G~G~ig~E~A~~l~~lG~~Vtii~~~~~~   58 (122)
T d1v59a2          30 GGGIIGLEMGSVYSRLGSKVTVVEFQPQI   58 (122)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCCchHHHHHHHHHhhCcceeEEEecccc
Confidence            57789999999999999999999987543

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=94.03  E-value=0.31  Score=33.51  Aligned_cols=66  Identities=11%  Similarity=0.012  Sum_probs=43.2

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhc--------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQ--------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~--------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      ++|+++.    +.+..|+ .|+.++.+++.++.+..        ..++.++..|+      ...++...++..++|+||.
T Consensus       154 ~~G~~sl----~aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~------~~~l~~~~~~~~~fD~Ii~  223 (317)
T d2b78a2         154 YTAAFSV----AAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDV------FDYFKYARRHHLTYDIIII  223 (317)
T ss_dssp             TTTHHHH----HHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCH------HHHHHHHHHTTCCEEEEEE
T ss_pred             CCcHHHH----HHHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccH------HHHHHHHHhhcCCCCEEEE
Confidence            3455443    3445787 79999999876665432        13577887776      3344555555568999999


Q ss_pred             CCCCC
Q 042185           73 NAGVQ   77 (162)
Q Consensus        73 ~ag~~   77 (162)
                      .+...
T Consensus       224 DPP~f  228 (317)
T d2b78a2         224 DPPSF  228 (317)
T ss_dssp             CCCCC
T ss_pred             cChhh
Confidence            88654

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=93.99  E-value=0.32  Score=29.31  Aligned_cols=99  Identities=16%  Similarity=0.190  Sum_probs=56.4

Q ss_pred             CCchHHHHHHHHHHCCC--eEEEEecChhhHHhh----hc---C-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            3 QGGIGHALARAFAASDC--RVVATGRSKATMADL----EQ---D-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~--~vi~~~r~~~~~~~~----~~---~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      .|.+|.+++..++.+|.  ++++.|.+++..+..    ..   . ........  .+.++           ...-|++|.
T Consensus         9 aG~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~~-----------~~daDvVVi   75 (143)
T d1llda1           9 AGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPEI-----------CRDADMVVI   75 (143)
T ss_dssp             CSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGGG-----------GTTCSEEEE
T ss_pred             CCHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCHHH-----------hhCCcEEEE
Confidence            48999999999999885  799999998654321    11   1 11222111  12221           124599999


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcC-CCeEEEec
Q 042185           73 NAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRK-KGKIINVG  124 (162)
Q Consensus        73 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~is  124 (162)
                      ++|....   ...+..   ..+..|..    +++.+.+.+.+.. ++.++++|
T Consensus        76 taG~~~~---~g~~R~---dl~~~N~~----i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          76 TAGPRQK---PGQSRL---ELVGATVN----ILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             CCCCCCC---TTCCHH---HHHHHHHH----HHHHHHHHHHHHCTTSEEEECC
T ss_pred             ecccccC---CCCchh---hhhhhhHH----HHHHHHHHHHhhCCCeEEEEeC
Confidence            9996422   123333   34455554    4455555554443 45666665

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=93.97  E-value=0.07  Score=32.81  Aligned_cols=30  Identities=23%  Similarity=0.180  Sum_probs=24.9

Q ss_pred             CCchHHHHHHHHHHCCC-eEEEEecChhhHH
Q 042185            3 QGGIGHALARAFAASDC-RVVATGRSKATMA   32 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~   32 (162)
                      .|.+|..++..++.++. ++++.|.+++..+
T Consensus        15 aG~VG~~lA~~l~~~~~~el~L~D~~~~~~~   45 (154)
T d1pzga1          15 SGMIGGTMGYLCALRELADVVLYDVVKGMPE   45 (154)
T ss_dssp             CSHHHHHHHHHHHHHTCCEEEEECSSSSHHH
T ss_pred             CCHHHHHHHHHHHhCCCceEEEEEeccccch
Confidence            48999999998888885 8999998876544

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=93.79  E-value=0.34  Score=33.26  Aligned_cols=59  Identities=12%  Similarity=0.060  Sum_probs=41.3

Q ss_pred             HHHHCCCeEEEEecChhhHHhhhc--------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185           13 AFAASDCRVVATGRSKATMADLEQ--------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus        13 ~l~~~g~~vi~~~r~~~~~~~~~~--------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      .++..|++|+.+|.+.+.++.+++        ..++.++..|+      .+.++...+...+.|+||..+...
T Consensus       149 ~aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~------~~~l~~~~~~~~~fD~IilDPP~f  215 (309)
T d2igta1         149 VAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDA------MKFIQREERRGSTYDIILTDPPKF  215 (309)
T ss_dssp             HHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCH------HHHHHHHHHHTCCBSEEEECCCSE
T ss_pred             HHHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCH------HHhHHHHhhcCCCCCEEEECCCcc
Confidence            345689999999999887665543        13567777665      344555555667899999988754

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=93.78  E-value=0.37  Score=29.32  Aligned_cols=103  Identities=18%  Similarity=0.155  Sum_probs=57.4

Q ss_pred             CCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhc---------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEE
Q 042185            3 QGGIGHALARAFAASDC-RVVATGRSKATMADLEQ---------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVN   72 (162)
Q Consensus         3 ~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~---------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~   72 (162)
                      +|.+|.+++..|..++. ++++.|++++..+....         .....+...+  ++           +....-|++|.
T Consensus        11 aG~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~-----------~~~~~advvvi   77 (150)
T d1t2da1          11 SGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY-----------DDLAGADVVIV   77 (150)
T ss_dssp             CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG-----------GGGTTCSEEEE
T ss_pred             CCHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cc-----------cccCCCcEEEE
Confidence            58999999998888886 89999998765443211         1222333221  11           12236799999


Q ss_pred             CCCCCCC-C-CCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-CCCeEEEecc
Q 042185           73 NAGVQCV-G-PLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKIINVGS  125 (162)
Q Consensus        73 ~ag~~~~-~-~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS  125 (162)
                      ++|.... + .-..++..+   .+..|.    .+++.+.+.+.+. .++.++++|-
T Consensus        78 tag~~~~~g~~~~~~~R~~---l~~~N~----~iv~~i~~~i~~~~p~aivivvtN  126 (150)
T d1t2da1          78 TAGFTKAPGKSDKEWNRDD---LLPLNN----KIMIEIGGHIKKNCPNAFIIVVTN  126 (150)
T ss_dssp             CCSCSSCTTCCSTTCCGGG---GHHHHH----HHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             ecccccCCCCCccccchhH---HHHHHH----HHHHHHHHHHHhcCCCeEEEEecC
Confidence            9996432 1 111222222   233333    3555555555544 3556666664

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.69  E-value=0.15  Score=35.21  Aligned_cols=101  Identities=12%  Similarity=0.159  Sum_probs=57.8

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhcC-------CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQD-------PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~~-------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ++|+++.+    ++..|+ +|+.++.+++.++.+...       .++.++..|+.      ..+........++|.||.+
T Consensus       155 g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~------~~~~~~~~~~~~fD~Vi~D  224 (324)
T d2as0a2         155 YTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF------EEMEKLQKKGEKFDIVVLD  224 (324)
T ss_dssp             TTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH------HHHHHHHHTTCCEEEEEEC
T ss_pred             cccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh------hhhHHHHhccCCCCchhcC
Confidence            34444443    445676 899999998877665431       35666666653      3344445555689999998


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhcCCCeEEEec
Q 042185           74 AGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYRKKGKIINVG  124 (162)
Q Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~is  124 (162)
                      +......      ........+    ....+++.+++.+  +++|.+++.|
T Consensus       225 pP~~~~~------~~~~~~~~~----~y~~l~~~a~~ll--~pGG~lv~~s  263 (324)
T d2as0a2         225 PPAFVQH------EKDLKAGLR----AYFNVNFAGLNLV--KDGGILVTCS  263 (324)
T ss_dssp             CCCSCSS------GGGHHHHHH----HHHHHHHHHHTTE--EEEEEEEEEE
T ss_pred             CccccCC------HHHHHHHHH----HHHHHHHHHHHHc--CCCcEEEEEe
Confidence            8754322      112222211    2233556666655  3456776655

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.66  E-value=0.17  Score=32.02  Aligned_cols=49  Identities=14%  Similarity=0.053  Sum_probs=35.0

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChh----------hHHhhhcCCceeEEEeccCCh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKA----------TMADLEQDPRFFVQELDVLSE   50 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~----------~~~~~~~~~~~~~~~~D~~~~   50 (162)
                      |.|.||+.+++.+..-|++|+..++...          .++++..+..+..+.+.++..
T Consensus        51 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~ell~~sDii~i~~plt~~  109 (188)
T d1sc6a1          51 GYGHIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPS  109 (188)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHHHCSEEEECCCSSTT
T ss_pred             ecccchhhhhhhcccccceEeeccccccchhhhhhhhhhHHHHHhhccceeecccCCcc
Confidence            5789999999999999999999998533          233333345566666666553

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.59  E-value=0.088  Score=30.51  Aligned_cols=29  Identities=24%  Similarity=0.263  Sum_probs=25.8

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKAT   30 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~   30 (162)
                      |+|.+|.++|..|.+.|.+|.++.|...-
T Consensus        29 GgG~ig~E~A~~l~~~G~~Vtlve~~~~i   57 (117)
T d1ebda2          29 GGGYIGIELGTAYANFGTKVTILEGAGEI   57 (117)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CCCccceeeeeeecccccEEEEEEeccee
Confidence            57899999999999999999999987653

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=93.44  E-value=0.11  Score=33.20  Aligned_cols=49  Identities=16%  Similarity=0.107  Sum_probs=34.3

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhh-------------HHhhhcCCceeEEEeccCCh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKAT-------------MADLEQDPRFFVQELDVLSE   50 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~-------------~~~~~~~~~~~~~~~D~~~~   50 (162)
                      |.|.||+.+++.+..-|++|+..++....             ++++.....+..+.+.+++.
T Consensus        56 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~l~~ll~~sD~i~~~~plt~~  117 (193)
T d1mx3a1          56 GLGRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEH  117 (193)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHHHCSEEEECCCCCTT
T ss_pred             ccccccccceeeeeccccceeeccCcccccchhhhccccccchhhccccCCEEEEeeccccc
Confidence            56899999999999999999999885321             22222234566666666554

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.36  E-value=0.19  Score=31.64  Aligned_cols=65  Identities=14%  Similarity=0.270  Sum_probs=44.4

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      |+|.+|.+    .+.+|+ +|+.++.+.+..+.+..       ..++.++..|+.      +.+++..+...+.|+||..
T Consensus        51 GsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~------~~l~~~~~~~~~fDlIflD  120 (182)
T d2fhpa1          51 GSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDAN------RALEQFYEEKLQFDLVLLD  120 (182)
T ss_dssp             TTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH------HHHHHHHHTTCCEEEEEEC
T ss_pred             ccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccch------hhhhhhcccCCCcceEEec
Confidence            56667765    455888 79999999876655433       246777777763      3455555555689999988


Q ss_pred             CCC
Q 042185           74 AGV   76 (162)
Q Consensus        74 ag~   76 (162)
                      +.+
T Consensus       121 PPY  123 (182)
T d2fhpa1         121 PPY  123 (182)
T ss_dssp             CCG
T ss_pred             hhh
Confidence            864

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.28  E-value=0.23  Score=32.37  Aligned_cols=58  Identities=14%  Similarity=0.070  Sum_probs=40.6

Q ss_pred             hHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            6 IGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         6 iG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      -|.. +..|+++|++|+.+|.++..++.++.     ..++.+...|+.+.+-           -++.|.|+..-+
T Consensus        52 tG~~-~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~~-----------~~~fD~I~~~~~  114 (251)
T d1wzna1          52 TGIP-TLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAF-----------KNEFDAVTMFFS  114 (251)
T ss_dssp             TCHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCC-----------CSCEEEEEECSS
T ss_pred             CCcc-chhhcccceEEEEEeeccccccccccccccccccchheehhhhhccc-----------ccccchHhhhhh
Confidence            3543 56788899999999999877665543     3468889988866430           136898887543

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=93.21  E-value=0.093  Score=33.17  Aligned_cols=48  Identities=21%  Similarity=0.289  Sum_probs=33.4

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChh--------hHHhhhcCCceeEEEeccCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKA--------TMADLEQDPRFFVQELDVLS   49 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~--------~~~~~~~~~~~~~~~~D~~~   49 (162)
                      |-|.||+.+++.+..-|++|+..+|...        .++++..+..+..+.+-+++
T Consensus        49 G~G~IG~~va~~l~~~g~~v~~~d~~~~~~~~~~~~~l~ell~~sDiv~~~~pl~~  104 (181)
T d1qp8a1          49 GLGEIGTRVGKILAALGAQVRGFSRTPKEGPWRFTNSLEEALREARAAVCALPLNK  104 (181)
T ss_dssp             SCSTHHHHHHHHHHHTTCEEEEECSSCCCSSSCCBSCSHHHHTTCSEEEECCCCST
T ss_pred             ccccccccceeeeeccccccccccccccccceeeeechhhhhhccchhhccccccc
Confidence            4678999999999999999999998643        22333334455555555543

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=93.15  E-value=0.061  Score=31.66  Aligned_cols=29  Identities=14%  Similarity=0.198  Sum_probs=26.0

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKAT   30 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~   30 (162)
                      |+|-||.++|..|.+.|.+|.++.|.+..
T Consensus        32 G~G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          32 GAGYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             ccchHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            57899999999999999999999997654

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.12  E-value=0.098  Score=33.12  Aligned_cols=28  Identities=32%  Similarity=0.310  Sum_probs=24.8

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKA   29 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~   29 (162)
                      |.|.||+++++.+..-|++|+..++...
T Consensus        51 G~G~IG~~va~~~~~fg~~v~~~d~~~~   78 (184)
T d1ygya1          51 GLGRIGQLVAQRIAAFGAYVVAYDPYVS   78 (184)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             cccchhHHHHHHhhhccceEEeecCCCC
Confidence            5789999999999999999999998643

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=92.95  E-value=0.11  Score=30.27  Aligned_cols=28  Identities=21%  Similarity=0.245  Sum_probs=25.2

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKA   29 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~   29 (162)
                      |+|.||.++|..|++.|++|.++.+...
T Consensus        29 G~G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          29 GAGVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCChHHHHHHHHHHHcCCceEEEEeecc
Confidence            5789999999999999999999988754

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=92.90  E-value=0.1  Score=33.13  Aligned_cols=49  Identities=24%  Similarity=0.247  Sum_probs=34.2

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChh--------------hHHhhhcCCceeEEEeccCCh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKA--------------TMADLEQDPRFFVQELDVLSE   50 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~--------------~~~~~~~~~~~~~~~~D~~~~   50 (162)
                      |.|.||+++++.|..-|.+|+..++...              .++++..+..+..+.+.+++.
T Consensus        51 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~~l~~sD~v~~~~plt~~  113 (188)
T d2naca1          51 AAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPE  113 (188)
T ss_dssp             CCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTT
T ss_pred             cccccchhhhhhhhccCceEEEEeeccccccccccccccccCCHHHHHHhccchhhccccccc
Confidence            5688999999999999999999997531              112222335566666666654

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=92.61  E-value=0.082  Score=34.08  Aligned_cols=34  Identities=18%  Similarity=0.291  Sum_probs=29.5

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLE   35 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~   35 (162)
                      |.|.+|..+|+.|.+.|++|++.+.+...+....
T Consensus        34 G~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~   67 (201)
T d1c1da1          34 GLGAVGGSLASLAAEAGAQLLVADTDTERVAHAV   67 (201)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEecchHHHHHHHH
Confidence            4688999999999999999999999987766553

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.45  E-value=0.088  Score=32.09  Aligned_cols=28  Identities=14%  Similarity=0.078  Sum_probs=25.3

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKA   29 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~   29 (162)
                      +++.||.++|..|+++|++|.++.+...
T Consensus        48 ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          48 DTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            5789999999999999999999998754

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.42  E-value=0.13  Score=30.17  Aligned_cols=28  Identities=18%  Similarity=0.148  Sum_probs=25.4

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKA   29 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~   29 (162)
                      |+|.||.++|..|.+.|.+|.++.|...
T Consensus        29 GgG~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          29 GAGYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCccHHHHHHHHhcCCcEEEEEeeccc
Confidence            5789999999999999999999999754

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=92.35  E-value=0.63  Score=28.03  Aligned_cols=106  Identities=25%  Similarity=0.241  Sum_probs=54.9

Q ss_pred             CCCCchHHHHHHHHHH-CC--CeEEEEecChhhHHh---hhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAA-SD--CRVVATGRSKATMAD---LEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~-~g--~~vi~~~r~~~~~~~---~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      |++|.+|.+++..|+. .+  .++++.|..+....+   +..-........ +...++.+    .+    -.-|++|.++
T Consensus         7 GaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~-~~~~~~~~----~~----~~aDvvvita   77 (145)
T d2cmda1           7 GAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG-FSGEDATP----AL----EGADVVLISA   77 (145)
T ss_dssp             TTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEE-ECSSCCHH----HH----TTCSEEEECC
T ss_pred             cCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcE-EEcCCCcc----cc----CCCCEEEECC
Confidence            6789999999998864 34  589999986432111   111111111111 11111121    11    2459999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-CCCeEEEecc
Q 042185           75 GVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKIINVGS  125 (162)
Q Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS  125 (162)
                      |.... +  .++..+   .+..|..    +++...+.+.+. +++.++++|.
T Consensus        78 G~~~k-~--g~~R~d---l~~~N~~----i~~~v~~~i~~~~p~aivivvtN  119 (145)
T d2cmda1          78 GVRRK-P--GMDRSD---LFNVNAG----IVKNLVQQVAKTCPKACIGIITN  119 (145)
T ss_dssp             SCCCC-T--TCCGGG---GHHHHHH----HHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CccCC-C--Ccchhh---HHHHHHH----HHHHHHHHHHhhCCCcEEEEccC
Confidence            97432 1  223322   3444543    445555555443 4566776664

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=92.34  E-value=0.23  Score=31.60  Aligned_cols=69  Identities=17%  Similarity=0.334  Sum_probs=49.0

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      |+||...++.+.+ . +.+|+.+|++++.++.++.     ..++.+++.++.+...   ++...  ..+++|.|+.-.|+
T Consensus        33 G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~---~~~~~--~~~~vdgIl~DlGv  105 (192)
T d1m6ya2          33 GEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADF---LLKTL--GIEKVDGILMDLGV  105 (192)
T ss_dssp             TTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHH---HHHHT--TCSCEEEEEEECSC
T ss_pred             CCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHH---HHHHc--CCCCcceeeeccch
Confidence            5677777777765 3 4699999999988776644     3578899988876433   22222  13589999999987


Q ss_pred             C
Q 042185           77 Q   77 (162)
Q Consensus        77 ~   77 (162)
                      .
T Consensus       106 S  106 (192)
T d1m6ya2         106 S  106 (192)
T ss_dssp             C
T ss_pred             h
Confidence            4

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=92.25  E-value=0.064  Score=32.69  Aligned_cols=30  Identities=17%  Similarity=0.282  Sum_probs=25.6

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhH
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATM   31 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~   31 (162)
                      |.|-+|.++++.|.++|++|+..+++.+..
T Consensus         7 G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~   36 (152)
T d1i36a2           7 GFGEVAQTLASRLRSRGVEVVTSLEGRSPS   36 (152)
T ss_dssp             SCSHHHHHHHHHHHHTTCEEEECCTTCCHH
T ss_pred             cHHHHHHHHHHHHHHCCCeEEEEcCchhHH
Confidence            568899999999999999999888776543

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.23  E-value=0.18  Score=36.25  Aligned_cols=27  Identities=22%  Similarity=0.402  Sum_probs=24.4

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecCh
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSK   28 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~   28 (162)
                      |.||+|.++++.|+..|. ++.++|.+.
T Consensus        44 G~GglG~ei~k~L~~~Gvg~i~lvD~D~   71 (426)
T d1yovb1          44 GAGGLGCELLKNLALSGFRQIHVIDMDT   71 (426)
T ss_dssp             CSSTTHHHHHHHHHTTTCCCEEEECCCB
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence            578999999999999998 899999864

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=92.17  E-value=0.35  Score=32.49  Aligned_cols=66  Identities=30%  Similarity=0.423  Sum_probs=43.5

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      |||.|+.++++   ...++|+.+|.+++.++-+..       ...+.+...|+.+.         ..+..+++|+||.|.
T Consensus       120 GsG~i~~~la~---~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~~fDlIVsNP  187 (271)
T d1nv8a_         120 GSGAIGVSVAK---FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFASIEMILSNP  187 (271)
T ss_dssp             TTSHHHHHHHH---HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTTTCCEEEECC
T ss_pred             eeehhhhhhhh---cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------cccccCcccEEEEcc
Confidence            44445555442   346799999999887665433       24566777777543         233457999999999


Q ss_pred             CCCCC
Q 042185           75 GVQCV   79 (162)
Q Consensus        75 g~~~~   79 (162)
                      .+.+.
T Consensus       188 PYI~~  192 (271)
T d1nv8a_         188 PYVKS  192 (271)
T ss_dssp             CCBCG
T ss_pred             cccCc
Confidence            87644

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=92.16  E-value=0.29  Score=27.00  Aligned_cols=60  Identities=18%  Similarity=0.161  Sum_probs=38.9

Q ss_pred             CCchHH-HHHHHHHHCCCeEEEEecChh-hHHhhhcCCceeEEE-eccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            3 QGGIGH-ALARAFAASDCRVVATGRSKA-TMADLEQDPRFFVQE-LDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         3 ~~giG~-~ia~~l~~~g~~vi~~~r~~~-~~~~~~~~~~~~~~~-~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      -+|+|- ++|+.|.++|+.|...|++.. ..+++.... +.+.. -|..+              ....|.||...++.
T Consensus         9 IgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~G-i~i~~gh~~~~--------------i~~~d~vV~SsAI~   71 (89)
T d1j6ua1           9 IGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLG-IPIFVPHSADN--------------WYDPDLVIKTPAVR   71 (89)
T ss_dssp             TTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTT-CCEESSCCTTS--------------CCCCSEEEECTTCC
T ss_pred             ECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCC-CeEEeeecccc--------------cCCCCEEEEecCcC
Confidence            456774 789999999999999999753 333343332 33322 22221              13689999999874

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=92.03  E-value=0.18  Score=32.26  Aligned_cols=54  Identities=17%  Similarity=0.047  Sum_probs=39.4

Q ss_pred             HHHHHHCCC-eEEEEecChhhHHhhhcC-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185           11 ARAFAASDC-RVVATGRSKATMADLEQD-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus        11 a~~l~~~g~-~vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      +..++..|+ +|+.++.+++.++.+... ..+.++..|+.+.             -+++|.||.|..+.
T Consensus        63 ~i~a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D~~~l-------------~~~fD~Vi~NPPfg  118 (197)
T d1ne2a_          63 ACGSYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADVSEI-------------SGKYDTWIMNPPFG  118 (197)
T ss_dssp             HHHHHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGC-------------CCCEEEEEECCCC-
T ss_pred             HHHHHHcCCCcccccccCHHHHHHHHHccccccEEEEehhhc-------------CCcceEEEeCcccc
Confidence            345667786 799999998877765543 4678888888543             25899999998763

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=91.98  E-value=0.57  Score=26.69  Aligned_cols=27  Identities=15%  Similarity=0.241  Sum_probs=23.7

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecCh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSK   28 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~   28 (162)
                      |+|.+|..-++.|.+.|++|++++...
T Consensus        19 G~G~va~~ka~~ll~~ga~v~v~~~~~   45 (113)
T d1pjqa1          19 GGGDVAERKARLLLEAGARLTVNALTF   45 (113)
T ss_dssp             CCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEEeccC
Confidence            578899999999999999998887653

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=91.95  E-value=0.81  Score=28.45  Aligned_cols=105  Identities=14%  Similarity=0.148  Sum_probs=55.1

Q ss_pred             CCCCchHHHHHHHHHHCC---C----eEEEEecChh--hHHhh----hcCCceeEEEeccCChHHHHHHHHHHHHHcCCc
Q 042185            1 CSQGGIGHALARAFAASD---C----RVVATGRSKA--TMADL----EQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKI   67 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g---~----~vi~~~r~~~--~~~~~----~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i   67 (162)
                      ||+|.||.+++..|++.+   .    .+.+.+.+..  .++..    .+.........-.++.+         .+.+..-
T Consensus        31 GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~---------~~~~~~a  101 (175)
T d7mdha1          31 GAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDP---------YEVFEDV  101 (175)
T ss_dssp             TTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCH---------HHHTTTC
T ss_pred             CCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccccc---------hhhccCC
Confidence            789999999999999753   2    4555565432  22211    11111111222222221         2334577


Q ss_pred             cEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-C-CCeEEEec
Q 042185           68 DVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-K-KGKIINVG  124 (162)
Q Consensus        68 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~-~~~iv~is  124 (162)
                      |++|..+|....   ..++.++   .+..|..    +++...+.+.+. + ...|++++
T Consensus       102 DvVvi~ag~~rk---pg~tR~D---ll~~N~~----I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1         102 DWALLIGAKPRG---PGMERAA---LLDINGQ----IFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             SEEEECCCCCCC---TTCCHHH---HHHHHHH----HHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ceEEEeeccCCC---CCCcHHH---HHHHHHH----HHHHHHHHHHhhCCCCcEEEEec
Confidence            999999987422   2344433   4444533    556666666553 3 34455554

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=91.88  E-value=0.31  Score=29.53  Aligned_cols=62  Identities=13%  Similarity=0.271  Sum_probs=40.0

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhc-------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQ-------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      |+|.+|.    +.+.+|+ +|+.++.+++..+.++.       ..++.+++.|..+      .++   ....+.|+|+..
T Consensus        24 GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~---~~~~~fDiIf~D   90 (152)
T d2esra1          24 GSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AID---CLTGRFDLVFLD   90 (152)
T ss_dssp             TTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHH---HBCSCEEEEEEC
T ss_pred             ccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------ccc---ccccccceeEec
Confidence            4555655    3456887 89999999876654432       2457788777532      222   234578999887


Q ss_pred             CCC
Q 042185           74 AGV   76 (162)
Q Consensus        74 ag~   76 (162)
                      +.+
T Consensus        91 PPy   93 (152)
T d2esra1          91 PPY   93 (152)
T ss_dssp             CSS
T ss_pred             hhh
Confidence            653

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=91.54  E-value=0.77  Score=27.35  Aligned_cols=101  Identities=16%  Similarity=0.087  Sum_probs=56.6

Q ss_pred             CCCCchHHHHHHHHHHCC--CeEEEEecChhhHHhhhc---------CCceeEEEeccCChHHHHHHHHHHHHHcCCccE
Q 042185            1 CSQGGIGHALARAFAASD--CRVVATGRSKATMADLEQ---------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDV   69 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g--~~vi~~~r~~~~~~~~~~---------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~   69 (162)
                      |+ |.+|.+++..|+.+|  .++++.|.+++..+....         .....+...  +++++           +-.-|+
T Consensus         7 Ga-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~-----------~~dadv   72 (142)
T d1guza1           7 GA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-----------TANSDI   72 (142)
T ss_dssp             CC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG-----------GTTCSE
T ss_pred             Cc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH-----------hcCCeE
Confidence            54 899999999999987  389999998765442211         112222221  22221           236699


Q ss_pred             EEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-CCCeEEEecc
Q 042185           70 LVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KKGKIINVGS  125 (162)
Q Consensus        70 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS  125 (162)
                      +|.++|.....   ..+..   ..+..|..    +++...+.+.+. +++.++++|-
T Consensus        73 vvitag~~~~~---g~~r~---~l~~~N~~----i~~~i~~~i~~~~p~aivivvtN  119 (142)
T d1guza1          73 VIITAGLPRKP---GMTRE---DLLMKNAG----IVKEVTDNIMKHSKNPIIIVVSN  119 (142)
T ss_dssp             EEECCSCCCCT---TCCHH---HHHHHHHH----HHHHHHHHHHHHCSSCEEEECCS
T ss_pred             EEEEEecCCCC---CCchH---HHHHHHHH----HHHHHHHHhhccCCCeEEEEecC
Confidence            99999974321   12222   23333433    344455545443 3556666553

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=91.52  E-value=0.13  Score=29.66  Aligned_cols=28  Identities=21%  Similarity=0.249  Sum_probs=25.2

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKA   29 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~   29 (162)
                      |+|.+|.++|..|.+.|++|.++.+.+.
T Consensus        28 GgG~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          28 GGGYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCCHHHHHHHHHHhhcccceEEEeeecc
Confidence            5789999999999999999999988754

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=91.52  E-value=0.17  Score=32.25  Aligned_cols=27  Identities=26%  Similarity=0.303  Sum_probs=23.9

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecCh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSK   28 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~   28 (162)
                      |-|.||+.+++.+...|++|+..++..
T Consensus        54 G~G~IG~~va~~l~~fg~~v~~~d~~~   80 (191)
T d1gdha1          54 GFGSIGQALAKRAQGFDMDIDYFDTHR   80 (191)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSSC
T ss_pred             ecccchHHHHHHHHhhccccccccccc
Confidence            568999999999999999999998753

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.51  E-value=0.077  Score=31.10  Aligned_cols=27  Identities=30%  Similarity=0.292  Sum_probs=24.7

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecCh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSK   28 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~   28 (162)
                      |+|.+|.++|..|++.|.+|.++.|.+
T Consensus        39 GgG~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          39 GGGFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             ECSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcHHHHHHHHHhhcccceEEEEeccc
Confidence            578999999999999999999999864

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=91.39  E-value=0.11  Score=30.53  Aligned_cols=29  Identities=21%  Similarity=0.177  Sum_probs=26.1

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKAT   30 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~   30 (162)
                      |+|.+|.++|..|.++|.+|.++.+.+.-
T Consensus        37 GgG~iG~E~A~~l~~~g~~Vtli~~~~~~   65 (121)
T d1d7ya2          37 GGGVIGLELAATARTAGVHVSLVETQPRL   65 (121)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             CcchhHHHHHHHhhcccceEEEEeecccc
Confidence            67899999999999999999999987653

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=91.17  E-value=0.26  Score=29.18  Aligned_cols=29  Identities=17%  Similarity=0.178  Sum_probs=26.0

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKAT   30 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~   30 (162)
                      |+|.+|.++|..|.+.|.+|.++.+...-
T Consensus        42 GgG~iG~E~A~~l~~~g~~Vtvie~~~~~   70 (133)
T d1q1ra2          42 GGGYIGLEVAATAIKANMHVTLLDTAARV   70 (133)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             CCchHHHHHHHHHHhhCcceeeeeecccc
Confidence            57899999999999999999999987654

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.10  E-value=0.92  Score=27.41  Aligned_cols=105  Identities=14%  Similarity=0.168  Sum_probs=53.5

Q ss_pred             CCCCchHHHHHHHHHHCCC-------eEEEEecChh--hHHhh----hcCCceeEEEeccCChHHHHHHHHHHHHHcCCc
Q 042185            1 CSQGGIGHALARAFAASDC-------RVVATGRSKA--TMADL----EQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKI   67 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~-------~vi~~~r~~~--~~~~~----~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i   67 (162)
                      ||+|.+|.+++..|+..+.       .+++.+.+..  ..+.+    .............++.+         .+.+...
T Consensus        10 GA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~   80 (154)
T d5mdha1          10 GAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKE---------EIAFKDL   80 (154)
T ss_dssp             STTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCH---------HHHTTTC
T ss_pred             CCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCccc---------ccccCCc
Confidence            7899999999999987542       3566665432  22221    11121222222332221         2223467


Q ss_pred             cEEEECCCCCCCCCCCCCChHHHHHHHHhhhhhHHHHHHHHHHhHhhc-CC-CeEEEec
Q 042185           68 DVLVNNAGVQCVGPLAEVPLSAMEQTFNTNVFGPMRLVQAVVPHMAYR-KK-GKIINVG  124 (162)
Q Consensus        68 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~-~~iv~is  124 (162)
                      |++|.++|.....   ..+.++   .++.|.    .+++...+.+.+. ++ +.++++|
T Consensus        81 dvVVitag~~~~~---g~sr~d---ll~~N~----~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          81 DVAILVGSMPRRD---GMERKD---LLKANV----KIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             SEEEECCSCCCCT---TCCTTT---THHHHH----HHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             eEEEEecccCCCC---CCchhH---HHHHhH----HHHHHHHHHHHhhCCCceEEEEec
Confidence            9999999974321   122222   223333    3556666666543 33 3455555

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.93  E-value=0.1  Score=32.70  Aligned_cols=33  Identities=21%  Similarity=0.386  Sum_probs=28.2

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLE   35 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~   35 (162)
                      |+||.+++++..|.+.| +|.++.|+.++.+++.
T Consensus        25 GaGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~   57 (177)
T d1nvta1          25 GAGGAARAVAFELAKDN-NIIIANRTVEKAEALA   57 (177)
T ss_dssp             CCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHH
T ss_pred             CCcHHHHHHHHHHcccc-ceeeehhhhhHHHHHH
Confidence            67899999999997766 9999999988877664

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=90.82  E-value=0.13  Score=30.18  Aligned_cols=28  Identities=29%  Similarity=0.289  Sum_probs=25.2

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKA   29 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~   29 (162)
                      |+|.+|.++|..|++.|.+|.++.+.+.
T Consensus        37 GgG~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          37 GSGYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CChHHHHHHHHHhhccceEEEEEEecCc
Confidence            5789999999999999999999988754

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=90.24  E-value=0.11  Score=34.34  Aligned_cols=27  Identities=22%  Similarity=0.195  Sum_probs=24.6

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecCh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSK   28 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~   28 (162)
                      |+|-.|.++|.+|+++|.+|++++++.
T Consensus        11 GaGi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1          11 GGGIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            577899999999999999999999864

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=90.22  E-value=0.2  Score=32.98  Aligned_cols=27  Identities=19%  Similarity=0.316  Sum_probs=24.6

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecCh
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSK   28 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~   28 (162)
                      |.||+|..+++.|+..|. ++.++|.+.
T Consensus        37 G~GglGs~va~~La~~Gvg~i~lvD~D~   64 (247)
T d1jw9b_          37 GLGGLGCAASQYLASAGVGNLTLLDFDT   64 (247)
T ss_dssp             CCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEECCcc
Confidence            589999999999999998 899999874

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=90.17  E-value=0.14  Score=29.81  Aligned_cols=28  Identities=14%  Similarity=0.081  Sum_probs=25.2

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKA   29 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~   29 (162)
                      |+|.+|.++|..|++.|.+|.++.|...
T Consensus        29 GgG~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          29 GSGYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CCchHHHHHHHHHHhccccceeeehhcc
Confidence            5789999999999999999999998753

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.04  E-value=0.15  Score=29.82  Aligned_cols=26  Identities=19%  Similarity=0.051  Sum_probs=23.8

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRS   27 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~   27 (162)
                      |+|-||.++|..|.+.|.+|.++.|+
T Consensus        27 GgG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          27 GASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCCccHHHHHHHHhhcCCeEEEEEec
Confidence            57899999999999999999988875

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=89.70  E-value=0.17  Score=29.19  Aligned_cols=28  Identities=18%  Similarity=0.116  Sum_probs=25.4

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKA   29 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~   29 (162)
                      |+|.+|.++|..|.+.|.+|.++.|.+.
T Consensus        28 GgG~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          28 GAGYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCChhhHHHHHHhhccccEEEEEeecch
Confidence            5789999999999999999999999754

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=89.70  E-value=1.4  Score=27.83  Aligned_cols=59  Identities=17%  Similarity=0.148  Sum_probs=40.3

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |+|.++.    .++.+|+ +|+.++.+++.++.+..     +....++..|+...             .+++|.||.|+.
T Consensus        56 GtG~l~i----~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~-------------~~~fD~Vi~nPP  118 (201)
T d1wy7a1          56 GTGVLSY----GALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF-------------NSRVDIVIMNPP  118 (201)
T ss_dssp             TTCHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC-------------CCCCSEEEECCC
T ss_pred             cchHHHH----HHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh-------------CCcCcEEEEcCc
Confidence            3444544    3456776 89999999876665543     35677777776432             358999999997


Q ss_pred             CC
Q 042185           76 VQ   77 (162)
Q Consensus        76 ~~   77 (162)
                      +.
T Consensus       119 ~~  120 (201)
T d1wy7a1         119 FG  120 (201)
T ss_dssp             CS
T ss_pred             cc
Confidence            64

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=89.33  E-value=0.45  Score=27.35  Aligned_cols=29  Identities=17%  Similarity=0.121  Sum_probs=25.8

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKAT   30 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~   30 (162)
                      |+|.+|.++|..|++.|.+|.++.|.+..
T Consensus        29 GgG~ig~E~A~~l~~~g~~vt~i~~~~~~   57 (121)
T d1mo9a2          29 GGSKTAVEYGCFFNATGRRTVMLVRTEPL   57 (121)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred             CCCHHHHHHHHHHHhcchhheEeeccchh
Confidence            67899999999999999999999987543

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=89.09  E-value=0.43  Score=32.07  Aligned_cols=65  Identities=20%  Similarity=0.257  Sum_probs=46.0

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc-----C-CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQ-----D-PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |||-||.++++.+  ...+|+.+|.+++.++.++.     . .++.+++.|+.+.-           ...++|+||.|..
T Consensus       118 GSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~~~v~~~~~d~~~~~-----------~~~~fDlIvsNPP  184 (274)
T d2b3ta1         118 GTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL-----------AGQQFAMIVSNPP  184 (274)
T ss_dssp             TTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG-----------TTCCEEEEEECCC
T ss_pred             hhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCcccceeeeccccccc-----------CCCceeEEEecch
Confidence            6777888777654  35699999999876665543     2 35888888875531           1248999999998


Q ss_pred             CCCC
Q 042185           76 VQCV   79 (162)
Q Consensus        76 ~~~~   79 (162)
                      +.+.
T Consensus       185 Yi~~  188 (274)
T d2b3ta1         185 YIDE  188 (274)
T ss_dssp             CBCT
T ss_pred             hhhh
Confidence            7543

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=88.94  E-value=0.23  Score=31.36  Aligned_cols=35  Identities=11%  Similarity=0.183  Sum_probs=29.6

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD   37 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~   37 (162)
                      |.|.+|..+|..|+ +|++|+..|-+++..+++...
T Consensus         7 GlG~vGl~~a~~~a-~g~~V~g~Din~~~v~~l~~g   41 (196)
T d1dlja2           7 GSGYVGLSLGVLLS-LQNEVTIVDILPSKVDKINNG   41 (196)
T ss_dssp             CCSHHHHHHHHHHT-TTSEEEEECSCHHHHHHHHTT
T ss_pred             CCChhHHHHHHHHH-CCCcEEEEECCHHHHHHHhhc
Confidence            57899999997665 799999999999988887653

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=88.88  E-value=1.2  Score=27.35  Aligned_cols=59  Identities=12%  Similarity=0.029  Sum_probs=35.0

Q ss_pred             HHHHHCCCeEEEEecChhhHHhhhcC-----CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185           12 RAFAASDCRVVATGRSKATMADLEQD-----PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus        12 ~~l~~~g~~vi~~~r~~~~~~~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      .+.+.+|++|+.++.+++..+.++..     ....+...|   .+.   ..........+.|+|+.++.+
T Consensus        57 i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~---~d~---~~~~~~~~~~~fD~If~DPPY  120 (171)
T d1ws6a1          57 LEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALP---VEV---FLPEAKAQGERFTVAFMAPPY  120 (171)
T ss_dssp             HHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSC---HHH---HHHHHHHTTCCEEEEEECCCT
T ss_pred             hhhhhccchhhhcccCHHHHhhhhHHHHhhccccceeeee---hhc---ccccccccCCccceeEEcccc
Confidence            45667899999999998877655432     222333222   221   223333334579999988754

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=88.81  E-value=0.17  Score=33.29  Aligned_cols=34  Identities=21%  Similarity=0.367  Sum_probs=29.1

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLE   35 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~   35 (162)
                      |.|-+|..+|+.|.+.|++|+.++.+...++.+.
T Consensus        46 G~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~   79 (230)
T d1leha1          46 GLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAV   79 (230)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHCCCEEEeecccHHHHHHHH
Confidence            5678999999999999999999999877666543

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=88.47  E-value=0.5  Score=29.53  Aligned_cols=62  Identities=11%  Similarity=0.072  Sum_probs=39.3

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecChhhHHhhhc------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSKATMADLEQ------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      |+|.+|.+    .+.+|+ +|+.++.+.+..+.+..      ..+..++..|+         ++.+.....+.|+||..+
T Consensus        53 GsG~~gie----alsrGa~~v~~VE~~~~a~~~~k~N~~~~~~~~~~ii~~d~---------~~~l~~~~~~fDlIf~DP  119 (183)
T d2fpoa1          53 GSGALGLE----ALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNA---------MSFLAQKGTPHNIVFVDP  119 (183)
T ss_dssp             TTCHHHHH----HHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCH---------HHHHSSCCCCEEEEEECC
T ss_pred             cccceeee----EEecCcceeEEEEEeechhhHHHHHHhhccccceeeeeecc---------cccccccccccCEEEEcC
Confidence            45555554    556888 79999999887665433      23555666553         222223345789999987


Q ss_pred             CC
Q 042185           75 GV   76 (162)
Q Consensus        75 g~   76 (162)
                      .+
T Consensus       120 PY  121 (183)
T d2fpoa1         120 PF  121 (183)
T ss_dssp             SS
T ss_pred             cc
Confidence            64

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.26  E-value=0.38  Score=29.74  Aligned_cols=32  Identities=22%  Similarity=0.304  Sum_probs=27.5

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMAD   33 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~   33 (162)
                      |-|.+|+.+|+.+...|++|++++.++-+..+
T Consensus        31 GyG~iG~g~A~~~rg~G~~V~v~e~dp~~al~   62 (163)
T d1li4a1          31 GYGDVGKGCAQALRGFGARVIITEIDPINALQ   62 (163)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             ccccccHHHHHHHHhCCCeeEeeecccchhHH
Confidence            46789999999999999999999999855433

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=87.95  E-value=1.2  Score=27.83  Aligned_cols=64  Identities=17%  Similarity=0.228  Sum_probs=43.7

Q ss_pred             HHHHHHCCCeEEEEecChhhHHhhhc--CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 042185           11 ARAFAASDCRVVATGRSKATMADLEQ--DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGVQCV   79 (162)
Q Consensus        11 a~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~   79 (162)
                      .+.+++++.+|+.+||+++.+..+..  ..++.+++.+.++.   ...+....  .+.+|.|+..-|+...
T Consensus        33 s~~iL~~~~~viaiD~D~~ai~~a~~~~~~~~~~~~~~f~~~---~~~l~~~~--~~~vdgIl~DLGvSs~   98 (182)
T d1wg8a2          33 ARGILERGGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHL---KRHLAALG--VERVDGILADLGVSSF   98 (182)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGH---HHHHHHTT--CSCEEEEEEECSCCHH
T ss_pred             HHHHhcccCcEEEEhhhhhHHHHHhhccccceeEeehHHHHH---HHHHHHcC--CCccCEEEEEccCCHH
Confidence            34555667799999999987765543  35778888777653   33333321  3579999999987543

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=87.62  E-value=1.1  Score=27.84  Aligned_cols=55  Identities=24%  Similarity=0.227  Sum_probs=36.5

Q ss_pred             HHHHHHCCCeEEEEecChhhHHhhhcC-------CceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185           11 ARAFAASDCRVVATGRSKATMADLEQD-------PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus        11 a~~l~~~g~~vi~~~r~~~~~~~~~~~-------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      ...|++.+.+|+.++.+++.++.+.+.       .++.++.+|..+          .......+|.++.+..
T Consensus        48 s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~----------~~~~~~~~D~v~~~~~  109 (186)
T d1l3ia_          48 TLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE----------ALCKIPDIDIAVVGGS  109 (186)
T ss_dssp             HHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH----------HHTTSCCEEEEEESCC
T ss_pred             cccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhh----------cccccCCcCEEEEeCc
Confidence            345566777999999998877665431       467788877421          1223457899987653

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=87.58  E-value=0.2  Score=29.46  Aligned_cols=28  Identities=14%  Similarity=0.229  Sum_probs=25.1

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKA   29 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~   29 (162)
                      |+|-||.++|..|.+.|.+|.++.+...
T Consensus        33 GgG~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          33 GGGIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             SCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCCHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            5789999999999999999999988654

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.28  E-value=1.1  Score=27.82  Aligned_cols=70  Identities=14%  Similarity=0.093  Sum_probs=39.4

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC-CceeEEEecc--CChHHHHHHHHHHHHHcCCccEEEECCCCC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQD-PRFFVQELDV--LSEQSVQNVLSNVLEKFGKIDVLVNNAGVQ   77 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~-~~~~~~~~D~--~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   77 (162)
                      |-|.=+|+.++..|.++|+.|..+..+.......... .-......|+  -..+.++....       ..|++|...|..
T Consensus        36 GrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~-------~aDIvIsavG~p  108 (171)
T d1edza1          36 NRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSL-------DSDVVITGVPSE  108 (171)
T ss_dssp             CCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHH-------HCSEEEECCCCT
T ss_pred             CCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccc-------cCCEEEEccCCC
Confidence            4566679999999999999998887653221100000 1111112222  22333444433       349999998864

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=87.17  E-value=0.077  Score=32.22  Aligned_cols=72  Identities=15%  Similarity=0.029  Sum_probs=40.3

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhcC------------CceeEEEeccCChHHHHHHHHHHHHHcCCccE
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKATMADLEQD------------PRFFVQELDVLSEQSVQNVLSNVLEKFGKIDV   69 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~------------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~   69 (162)
                      |.|-+|+++++.|.+.+..+.+.+|+.++.+++.++            ....++-+=+. ++++..++.++.   .+=.+
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~~~~~~DiVil~v~-d~~i~~v~~~l~---~~~~i   81 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVP-DRYIKTVANHLN---LGDAV   81 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECSC-TTTHHHHHTTTC---CSSCC
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccccchhhhhccCcEEEEecc-chhhhHHHhhhc---cccee
Confidence            578899999998865443346889999887776542            11122222222 345666665542   12345


Q ss_pred             EEECCCCC
Q 042185           70 LVNNAGVQ   77 (162)
Q Consensus        70 vi~~ag~~   77 (162)
                      ++++++..
T Consensus        82 vi~~s~~~   89 (153)
T d2i76a2          82 LVHCSGFL   89 (153)
T ss_dssp             EEECCSSS
T ss_pred             eeecccch
Confidence            77887754

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=86.83  E-value=0.49  Score=31.19  Aligned_cols=27  Identities=15%  Similarity=0.242  Sum_probs=23.9

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecCh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSK   28 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~   28 (162)
                      |+|-.|..+|.+|+++|.+|+++++..
T Consensus        10 GaGi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1          10 GAGSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             CcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            466789999999999999999999864

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=86.58  E-value=0.65  Score=28.53  Aligned_cols=73  Identities=18%  Similarity=0.241  Sum_probs=48.6

Q ss_pred             CCCCchHHHHHHHHHHC-CCeEE-EEecChhhHH-----hh----------hc-----CCceeEEEeccCChHHHHHHHH
Q 042185            1 CSQGGIGHALARAFAAS-DCRVV-ATGRSKATMA-----DL----------EQ-----DPRFFVQELDVLSEQSVQNVLS   58 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~-g~~vi-~~~r~~~~~~-----~~----------~~-----~~~~~~~~~D~~~~~~i~~~~~   58 (162)
                      |++|-+|+++++...+. ++.++ .++|......     +.          ..     ..... +-+|++.++.....++
T Consensus        11 Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D-ViIDFs~p~~~~~~~~   89 (162)
T d1diha1          11 GAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD-VFIDFTRPEGTLNHLA   89 (162)
T ss_dssp             TTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS-EEEECSCHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccc-eEEEeccHHHHHHHHH
Confidence            78999999999999876 56654 4444321100     00          00     01233 3489999999999988


Q ss_pred             HHHHHcCCccEEEECCCC
Q 042185           59 NVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus        59 ~~~~~~~~id~vi~~ag~   76 (162)
                      ...+.  ++..|+-..|+
T Consensus        90 ~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          90 FCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHT--TCEEEECCCCC
T ss_pred             HHHhc--cceeEEecCCC
Confidence            87664  78888888885

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=86.52  E-value=0.34  Score=31.29  Aligned_cols=26  Identities=27%  Similarity=0.249  Sum_probs=23.7

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecC
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRS   27 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~   27 (162)
                      |+|-.|.+.|.+|+++|++|.+++|+
T Consensus        13 GaGiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1          13 GSGVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CccHHHHHHHHHHHHCCCCEEEEeCC
Confidence            56788999999999999999999985

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=85.44  E-value=2.2  Score=24.93  Aligned_cols=63  Identities=14%  Similarity=0.211  Sum_probs=43.0

Q ss_pred             HHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            7 GHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         7 G~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      +.+.++.|.+.|++++++..|++....-.+  ...-+-++--..+++..+++.-     ++|.++-..|.
T Consensus        30 ~~~a~~alke~g~~~iliN~NP~TVstd~d--~aD~lYfePlt~e~v~~Ii~~E-----~pd~il~~~GG   92 (127)
T d1a9xa3          30 GAQACKALREEGYRVINVNSNPATIMTDPE--MADATYIEPIHWEVVRKIIEKE-----RPDAVLPTMGG   92 (127)
T ss_dssp             HHHHHHHHHHHTCEEEEECSCTTCGGGCGG--GSSEEECSCCCHHHHHHHHHHH-----CCSEEECSSSH
T ss_pred             HHHHHHHHHHcCCeEEEecCchHhhhcChh--hcceeeeecCCHHHHHHHHHHh-----CcCCeEEEeee
Confidence            567889999999999999999876543221  1222223334456677776664     89999877774

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.20  E-value=0.88  Score=27.22  Aligned_cols=25  Identities=12%  Similarity=0.341  Sum_probs=22.2

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEec
Q 042185            2 SQGGIGHALARAFAASDCRVVATGR   26 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r   26 (162)
                      |+|.+|..-++.|++.|++|++++.
T Consensus        20 GgG~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          20 GGGEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             EESHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeC
Confidence            4578999999999999999998865

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.09  E-value=1.2  Score=27.51  Aligned_cols=34  Identities=9%  Similarity=0.093  Sum_probs=22.8

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhh
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADL   34 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~   34 (162)
                      |.|.-+|+.++..|.++|++|.++.+....+.+.
T Consensus        46 GrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~~   79 (170)
T d1a4ia1          46 GRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEE   79 (170)
T ss_dssp             CCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHH
T ss_pred             ecCCccchHHHHHHHhccCceEEEecccccHHHH
Confidence            4455677788888877777777777655544443

>d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: (Uracil-5-)-methyltransferase
domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain
species: Escherichia coli [TaxId: 562]

Probab=84.04  E-value=1.9  Score=29.63  Aligned_cols=66  Identities=14%  Similarity=0.096  Sum_probs=42.2

Q ss_pred             CCCCchHHHHHHHHHHCCCeEEEEecChhhHHhhhc------CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECC
Q 042185            1 CSQGGIGHALARAFAASDCRVVATGRSKATMADLEQ------DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNA   74 (162)
Q Consensus         1 Ga~~giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~a   74 (162)
                      +|.|.++..+    ++++.+|+.+..+.+..+.++.      -.++.++..|+.+.-      ........++|.+|...
T Consensus       221 cG~G~fsl~L----a~~~~~V~gvE~~~~ai~~A~~na~~n~i~n~~~~~~~~~~~~------~~~~~~~~~~d~vilDP  290 (358)
T d1uwva2         221 CGMGNFTLPL----ATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDV------TKQPWAKNGFDKVLLDP  290 (358)
T ss_dssp             CTTTTTHHHH----HTTSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCC------SSSGGGTTCCSEEEECC
T ss_pred             ccccccchhc----cccccEEEeccCcHHHHHHHHHhHHhcccccceeeecchhhhh------hhhhhhhccCceEEeCC
Confidence            3566676655    4567799999999877665543      256778887775531      11122234689998877


Q ss_pred             CC
Q 042185           75 GV   76 (162)
Q Consensus        75 g~   76 (162)
                      .-
T Consensus       291 PR  292 (358)
T d1uwva2         291 AR  292 (358)
T ss_dssp             CT
T ss_pred             CC
Confidence            53

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.57  E-value=0.47  Score=30.07  Aligned_cols=27  Identities=11%  Similarity=0.161  Sum_probs=23.8

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecCh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSK   28 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~   28 (162)
                      |+|--|...|..|+++|.+|+++.++.
T Consensus        12 GaG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1          12 GTGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CcCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            567788999999999999999998864

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=83.36  E-value=0.75  Score=28.27  Aligned_cols=31  Identities=16%  Similarity=0.113  Sum_probs=24.7

Q ss_pred             chHHHHHHHHHHCCCeEEEEecChhhHHhhhc
Q 042185            5 GIGHALARAFAASDCRVVATGRSKATMADLEQ   36 (162)
Q Consensus         5 giG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~   36 (162)
                      |.|. .+..|+++|++|+.+|.+++.++.+.+
T Consensus        30 G~G~-~a~~la~~G~~V~gvD~S~~~i~~a~~   60 (201)
T d1pjza_          30 GKSQ-DMSWLSGQGYHVVGAELSEAAVERYFT   60 (201)
T ss_dssp             CCSH-HHHHHHHHCCEEEEEEECHHHHHHHHH
T ss_pred             cCCH-HHHHHHHcCCceEeecccHHHHHHHHH
Confidence            5666 566899999999999999887766543

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=83.27  E-value=0.48  Score=31.66  Aligned_cols=27  Identities=15%  Similarity=0.282  Sum_probs=23.6

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecCh
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRSK   28 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~~   28 (162)
                      |+|-+|.++|.+|+++|. +|++++|+.
T Consensus         8 GaGi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           8 GAGIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CCSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CcCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            567899999999999997 699998863

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=83.21  E-value=2.8  Score=24.26  Aligned_cols=63  Identities=8%  Similarity=-0.027  Sum_probs=40.9

Q ss_pred             HHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCCC
Q 042185            7 GHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAGV   76 (162)
Q Consensus         7 G~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag~   76 (162)
                      +...++.|.+.|++++++..|++....-.+  ...-+-++--..+.+..+++.=     ++|.++...|.
T Consensus        27 ~~~a~~aLk~~g~~~IliN~NPeTVstd~d--~aD~lYfeplt~e~v~~Ii~~E-----~p~~ii~~~GG   89 (121)
T d1a9xa4          27 CVHASLALREDGYETIMVNCNPETVSTDYD--TSDRLYFEPVTLEDVLEIVRIE-----KPKGVIVQYGG   89 (121)
T ss_dssp             HHHHHHHHHHTTCEEEEECCCTTSSTTSTT--SSSEEECCCCSHHHHHHHHHHH-----CCSEEECSSST
T ss_pred             HHHHHHHHHhcCCeEEEEecChhhhhcChh--hcCceEEccCCHHHHHHHHHHh-----CCCEEEeehhh
Confidence            568899999999999999999876542211  1222222333445555555543     78998877775

>d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Hypothetical protein BH3024
species: Bacillus halodurans [TaxId: 86665]

Probab=82.54  E-value=2.3  Score=24.18  Aligned_cols=70  Identities=14%  Similarity=0.049  Sum_probs=45.8

Q ss_pred             hHHHHHHHHHHCCCeEEEEecChhhHHhhhcCCceeEEEeccCChH-HHHHHHHHHHHHcCCccEEEECCC
Q 042185            6 IGHALARAFAASDCRVVATGRSKATMADLEQDPRFFVQELDVLSEQ-SVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         6 iG~~ia~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      +...+...|.+.|+.|..+....+.++.+.+......+-+|+.=++ +=-.+++.+++....+-+++..+.
T Consensus        14 ~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~~dliilD~~lp~~~G~el~~~ir~~~~~~pii~lt~~   84 (118)
T d2b4aa1          14 HATLIQYHLNQLGAEVTVHPSGSAFFQHRSQLSTCDLLIVSDQLVDLSIFSLLDIVKEQTKQPSVLILTTG   84 (118)
T ss_dssp             HHHHHHHHHHHTTCEEEEESSHHHHHHTGGGGGSCSEEEEETTCTTSCHHHHHHHHTTSSSCCEEEEEESC
T ss_pred             HHHHHHHHHHhcCCCeEEECCHHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEECC
Confidence            4567788888999999987766666665654445666667764333 234556777766656667766553

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.30  E-value=0.7  Score=34.05  Aligned_cols=26  Identities=4%  Similarity=0.112  Sum_probs=23.0

Q ss_pred             CCCchHHHHHHHHHHCCC-eEEEEecC
Q 042185            2 SQGGIGHALARAFAASDC-RVVATGRS   27 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~-~vi~~~r~   27 (162)
                      |.||+|.++++.|+..|. ++.++|.+
T Consensus        32 G~gglG~Ei~knLvl~GVg~itivD~d   58 (529)
T d1yova1          32 NATATGTEILKNLVLPGIGSFTIIDGN   58 (529)
T ss_dssp             CCSHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred             CCCHHHHHHHHHHHHhcCCEEEEEcCC
Confidence            568999999999999997 89998864

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=81.59  E-value=0.79  Score=28.37  Aligned_cols=66  Identities=15%  Similarity=0.186  Sum_probs=39.1

Q ss_pred             CCCchHHHHHHHHHHC-CCeEE-EEecChhhHHhhhcCCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEECCC
Q 042185            2 SQGGIGHALARAFAAS-DCRVV-ATGRSKATMADLEQDPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNNAG   75 (162)
Q Consensus         2 a~~giG~~ia~~l~~~-g~~vi-~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~ag   75 (162)
                      |+|.+|+..+..+... +++|+ +.+++.++.++...+..+..   +..-.++++++++.     ..+|.++.+..
T Consensus         8 G~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~ll~~-----~~iD~v~I~tp   75 (184)
T d1ydwa1           8 GCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPE---STKIHGSYESLLED-----PEIDALYVPLP   75 (184)
T ss_dssp             SCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCT---TCEEESSHHHHHHC-----TTCCEEEECCC
T ss_pred             cCCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhcccccc---ceeecCcHHHhhhc-----cccceeeeccc
Confidence            4678999999988776 56776 66888877666544222110   00001234444432     37888877664

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=81.08  E-value=0.73  Score=28.77  Aligned_cols=28  Identities=25%  Similarity=0.183  Sum_probs=24.9

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEEecChh
Q 042185            2 SQGGIGHALARAFAASDCRVVATGRSKA   29 (162)
Q Consensus         2 a~~giG~~ia~~l~~~g~~vi~~~r~~~   29 (162)
                      |+|.-|.+.|..|+++|++|.+..++..
T Consensus        50 GaGPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          50 GAGPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CccHHHHHHHHHHHhhccceEEEeccCc
Confidence            5678899999999999999999998743

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=80.07  E-value=3.9  Score=26.75  Aligned_cols=53  Identities=23%  Similarity=0.192  Sum_probs=35.1

Q ss_pred             HHHHHHHCCCeEEEEecChhhHHhhhc-----CCceeEEEeccCChHHHHHHHHHHHHHcCCccEEEEC
Q 042185           10 LARAFAASDCRVVATGRSKATMADLEQ-----DPRFFVQELDVLSEQSVQNVLSNVLEKFGKIDVLVNN   73 (162)
Q Consensus        10 ia~~l~~~g~~vi~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vi~~   73 (162)
                      ++..+++.|++|+.+|.+++.++.++.     +....+...|+.+      .     ...++.|.|+.|
T Consensus       134 l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~------~-----~~~~~fD~V~an  191 (254)
T d2nxca1         134 LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA------A-----LPFGPFDLLVAN  191 (254)
T ss_dssp             HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH------H-----GGGCCEEEEEEE
T ss_pred             HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEeccccc------c-----ccccccchhhhc
Confidence            344567789999999999887766543     3455666655421      1     123588999876