Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>042186
MYLLFETADCGFGILCEPDIMFHLEKSISYCRKRSWTGVWQSKVKHSAANKLMEKTS

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  042186
        (57 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2051905 - symbol:AT2G19790 species:3702 "Arabi...    88  0.00035   1


>TAIR|locus:2051905 [details] [associations]
            symbol:AT2G19790 species:3702 "Arabidopsis thaliana"
            [GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0006810 "transport"
            evidence=IEA] [GO:0006886 "intracellular protein transport"
            evidence=ISS] [GO:0008565 "protein transporter activity"
            evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
            [GO:0030125 "clathrin vesicle coat" evidence=ISS] [GO:0006301
            "postreplication repair" evidence=RCA] InterPro:IPR011012
            InterPro:IPR016635 PIRSF:PIRSF015588 PROSITE:PS00989 GO:GO:0005794
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008565 GO:GO:0005905
            EMBL:AC005169 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356
            eggNOG:COG5030 HOGENOM:HOG000185227 PANTHER:PTHR11753 KO:K12403
            OMA:KLVYRQY EMBL:AF370185 EMBL:AY059143 EMBL:AY088273
            IPI:IPI00539602 PIR:B84581 RefSeq:NP_179569.1 UniGene:At.24011
            UniGene:At.63553 ProteinModelPortal:O82201 SMR:O82201 STRING:O82201
            PaxDb:O82201 PRIDE:O82201 EnsemblPlants:AT2G19790.1 GeneID:816498
            KEGG:ath:AT2G19790 TAIR:At2g19790 InParanoid:O82201
            PhylomeDB:O82201 ProtClustDB:CLSN2683196 Genevestigator:O82201
            Uniprot:O82201
        Length = 143

 Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
 Identities = 24/57 (42%), Positives = 32/57 (56%)

Query:     1 MYLLFETADCGFGILCEPDIMFHLEKSISYCRKRSWTG--VWQSKVKHSAANKLMEK 55
             ++LL ET D  FG +CE DIMFHLEK+     +    G  V  SK    +  +LM+K
Sbjct:    85 IHLLVETMDKHFGNVCELDIMFHLEKAHFMLEEMVMNGCIVETSKANILSPIQLMDK 141


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.133   0.437    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       57        57   0.00091  102 3  11 22  0.45    27
                                                     29  0.44    27


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  553 (59 KB)
  Total size of DFA:  108 KB (2073 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  6.53u 0.20s 6.73t   Elapsed:  00:00:01
  Total cpu time:  6.53u 0.20s 6.73t   Elapsed:  00:00:01
  Start:  Mon May 20 22:27:43 2013   End:  Mon May 20 22:27:44 2013

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