Query 042194
Match_columns 364
No_of_seqs 161 out of 1745
Neff 9.5
Searched_HMMs 13730
Date Mon Mar 25 05:58:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042194.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/042194hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2axtl1 f.23.31.1 (L:1-37) Pho 33.3 30 0.0022 17.9 3.6 25 120-144 13-37 (37)
2 d1xl4a2 f.14.1.1 (A:23-138) In 28.4 27 0.002 23.7 3.8 57 286-361 60-116 (116)
3 d1hvwa_ g.3.6.2 (A:) Atracotox 17.5 24 0.0018 16.4 1.0 11 32-43 5-15 (26)
4 d1lwha1 b.71.1.1 (A:392-441) 4 12.6 25 0.0018 19.3 0.3 12 5-16 30-41 (50)
5 d1d0da_ g.8.1.2 (A:) Anticoagu 10.0 23 0.0017 20.3 -0.4 13 34-46 37-49 (60)
6 d1p7ba2 f.14.1.1 (A:36-151) In 8.6 1.4E+02 0.0099 19.8 3.3 23 286-308 61-83 (116)
7 d3dtub2 f.17.2.1 (B:30-129) Ba 7.6 1.9E+02 0.014 18.5 3.7 26 337-362 33-58 (100)
8 d1w66a1 d.104.1.3 (A:1-216) Li 6.7 48 0.0035 25.5 -0.0 18 5-27 75-92 (216)
9 d2hgsa1 c.30.1.4 (A:202-303) E 6.7 36 0.0026 22.8 -0.7 23 4-33 47-69 (102)
10 d1clca2 b.1.18.2 (A:35-134) Ce 6.5 1E+02 0.0073 20.2 1.6 14 3-16 46-59 (100)
No 1
>d2axtl1 f.23.31.1 (L:1-37) Photosystem II reaction center protein L, PsbL {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=33.34 E-value=30 Score=17.92 Aligned_cols=25 Identities=16% Similarity=0.323 Sum_probs=16.0
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHhhc
Q 042194 120 SPSYNLTRIMHMTTSSLLFGVLFWE 144 (364)
Q Consensus 120 ~~~~~~~~l~~~~~~~ll~g~~f~~ 144 (364)
|+..++..++..+++++++..-|+|
T Consensus 13 NrtsLy~GlLlifvl~vLFssYfFN 37 (37)
T d2axtl1 13 NRTSLYLGLLLILVLALLFSSYFFN 37 (37)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred chhhHHHHHHHHHHHHHHHHHHhcC
Confidence 4455666666677777777766553
No 2
>d1xl4a2 f.14.1.1 (A:23-138) Inward rectifier potassium channel kirbac3.1 {Magnetospirillum magnetotacticum [TaxId: 188]}
Probab=28.38 E-value=27 Score=23.72 Aligned_cols=57 Identities=12% Similarity=-0.064 Sum_probs=34.2
Q ss_pred hccChHHHHHHHHHHhhhcCCCceeeecCCCccHHHHHHHhhCCCCCCccchhhHHHHHHHHHHHHHHHHHHhccc
Q 042194 286 YYMTPTSWALNGMITSQYGDIDKEIIVFGETKSLSSFLEDYFGFHHDRLPITAVVLIFYPLVLAFLFAYCIGKLNF 361 (364)
Q Consensus 286 ~~~sp~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~L~~~~~~~~~l~~~~l~~~~~ 361 (364)
++..-+.|+++.+...-|++....|. .+. ....+.++.+..+.-..++.+.-++.||
T Consensus 60 ~~~~a~yfs~~T~tTvGYGDi~P~t~-------~~r------------~~~~~~~~~G~~~~a~~~g~i~~~fsrP 116 (116)
T d1xl4a2 60 SFTDAFFFSVQTMATIGYGKLIPIGP-------LAN------------TLVTLEALCGMLGLAVAASLIYARFTRP 116 (116)
T ss_dssp CHHHHHHHHHHHHTTCCCSSSCCCHH-------HHH------------HHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHccCCCCccccCCc-------HHH------------HHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 55667788999988777766554331 111 2345555666655555666666665554
No 3
>d1hvwa_ g.3.6.2 (A:) Atracotoxin-hvI (versutoxin) {Australian funnel-web spider (Hadronyche versuta) [TaxId: 6904]}
Probab=17.48 E-value=24 Score=16.37 Aligned_cols=11 Identities=27% Similarity=0.084 Sum_probs=8.1
Q ss_pred CCCCCCCCCChh
Q 042194 32 GVPKIRKNYNPA 43 (364)
Q Consensus 32 g~~~cp~~~Npa 43 (364)
|- |||-++|-.
T Consensus 5 gq-pcpynencc 15 (26)
T d1hvwa_ 5 GQ-PCPYNENCC 15 (26)
T ss_dssp TS-BCSSTTSBS
T ss_pred CC-cCCCCcccc
Confidence 55 899888753
No 4
>d1lwha1 b.71.1.1 (A:392-441) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]}
Probab=12.56 E-value=25 Score=19.28 Aligned_cols=12 Identities=8% Similarity=0.252 Sum_probs=9.6
Q ss_pred ccCCeEEEEcCC
Q 042194 5 KTGGRIIYCRPL 16 (364)
Q Consensus 5 l~~G~~vY~G~~ 16 (364)
+++|++||.|-.
T Consensus 30 ls~~e~vfegv~ 41 (50)
T d1lwha1 30 LSGEEVVFEGVK 41 (50)
T ss_dssp CSSSCCEETTEE
T ss_pred cCCCeEEEEEEE
Confidence 688999998853
No 5
>d1d0da_ g.8.1.2 (A:) Anticoagulant protein, factor Xa inhibitor {Soft tick (Ornithodoros moubata) [TaxId: 6938]}
Probab=9.99 E-value=23 Score=20.32 Aligned_cols=13 Identities=8% Similarity=-0.079 Sum_probs=11.1
Q ss_pred CCCCCCCChhhHH
Q 042194 34 PKIRKNYNPATWI 46 (364)
Q Consensus 34 ~~cp~~~NpaD~~ 46 (364)
.-||+..|-+||+
T Consensus 37 wicpe~~~g~dyy 49 (60)
T d1d0da_ 37 WICPEDHTGADYY 49 (60)
T ss_dssp EECTTTCCSCCCC
T ss_pred eECCccCCCccch
Confidence 3699999999986
No 6
>d1p7ba2 f.14.1.1 (A:36-151) Inward rectifier potassium channel Kirbac1.1 {Burkholderia pseudomallei [TaxId: 28450]}
Probab=8.57 E-value=1.4e+02 Score=19.76 Aligned_cols=23 Identities=17% Similarity=0.394 Sum_probs=13.7
Q ss_pred hccChHHHHHHHHHHhhhcCCCc
Q 042194 286 YYMTPTSWALNGMITSQYGDIDK 308 (364)
Q Consensus 286 ~~~sp~~y~~~~l~~~~f~~~~~ 308 (364)
.+.+.+.|+++.+...-|++...
T Consensus 61 ~~~~a~yfs~~T~tTvGYGDi~P 83 (116)
T d1p7ba2 61 GFVGAFFFSVETLATVGYGDMHP 83 (116)
T ss_dssp STHHHHHHHTTTTTTCCCSCCCC
T ss_pred CHHHHHHHHHHHHHhcccccccc
Confidence 34566677777776655555433
No 7
>d3dtub2 f.17.2.1 (B:30-129) Bacterial aa3 type cytochrome c oxidase subunit II {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=7.59 E-value=1.9e+02 Score=18.50 Aligned_cols=26 Identities=4% Similarity=-0.097 Sum_probs=15.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhcccc
Q 042194 337 TAVVLIFYPLVLAFLFAYCIGKLNFL 362 (364)
Q Consensus 337 ~~~~L~~~~~~~~~l~~~~l~~~~~~ 362 (364)
.+...+.+.++...+.+...|+++++
T Consensus 33 ~~i~~~I~~~V~~~l~~~~~~~r~~~ 58 (100)
T d3dtub2 33 LVIIAAITIFVTLLILYAVWRFHEKR 58 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHBTTT
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccC
Confidence 33444444556667777777777654
No 8
>d1w66a1 d.104.1.3 (A:1-216) Lipoyltransferase LipB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=6.74 E-value=48 Score=25.50 Aligned_cols=18 Identities=33% Similarity=0.656 Sum_probs=15.2
Q ss_pred ccCCeEEEEcCCCCCchHHHhhh
Q 042194 5 KTGGRIIYCRPLEKHSSQVIEYF 27 (364)
Q Consensus 5 l~~G~~vY~G~~~~~~~~~~~yF 27 (364)
-.||++.||||- +.+-|+
T Consensus 75 dRGG~vTyHGPG-----QlV~Yp 92 (216)
T d1w66a1 75 DRGGKITWHGPG-----QLVGYP 92 (216)
T ss_dssp SSSSSEEEECTT-----EEEEEE
T ss_pred CCCceEEEecCC-----ceeeEE
Confidence 468999999995 888887
No 9
>d2hgsa1 c.30.1.4 (A:202-303) Eukaryotic glutathione synthetase, substrate-binding domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.74 E-value=36 Score=22.82 Aligned_cols=23 Identities=22% Similarity=0.392 Sum_probs=17.2
Q ss_pred eccCCeEEEEcCCCCCchHHHhhhccCCCC
Q 042194 4 LKTGGRIIYCRPLEKHSSQVIEYFEGISGV 33 (364)
Q Consensus 4 Ll~~G~~vY~G~~~~~~~~~~~yF~~~~g~ 33 (364)
|..+|+..+.|+ +=++-||.+ ||
T Consensus 47 l~~~~~L~~~~~-----eVavvYfRa--GY 69 (102)
T d2hgsa1 47 LDQDRRLFVDGQ-----EIAVVYFRD--GY 69 (102)
T ss_dssp ECSSCCEEETTE-----EEEEEEESS--CS
T ss_pred eCCCCcEEEcCc-----EEEEEEEec--Cc
Confidence 345677777775 467899998 88
No 10
>d1clca2 b.1.18.2 (A:35-134) CelD cellulase, N-terminal domain {Clostridium thermocellum [TaxId: 1515]}
Probab=6.53 E-value=1e+02 Score=20.21 Aligned_cols=14 Identities=29% Similarity=0.608 Sum_probs=11.8
Q ss_pred eeccCCeEEEEcCC
Q 042194 3 LLKTGGRIIYCRPL 16 (364)
Q Consensus 3 lLl~~G~~vY~G~~ 16 (364)
++.++|++||.|+.
T Consensus 46 ~~~~~g~~V~~G~~ 59 (100)
T d1clca2 46 VVKEDGTIVYTGTA 59 (100)
T ss_dssp EEETTSBEEEEEEC
T ss_pred EECCCCCEEEEEEe
Confidence 45678999999987
Done!