Query 042198
Match_columns 437
No_of_seqs 176 out of 1187
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 06:03:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042198.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042198hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bgh_A Vinorine synthase; VS, 100.0 2.9E-76 9.8E-81 596.5 35.8 386 1-429 28-420 (421)
2 4g22_A Hydroxycinnamoyl-COA sh 100.0 8.1E-75 2.8E-79 589.0 37.9 383 1-416 29-434 (439)
3 2e1v_A Acyl transferase; BAHD 100.0 4.8E-69 1.6E-73 549.2 33.8 390 1-422 29-448 (454)
4 2xr7_A Malonyltransferase; xen 100.0 7E-69 2.4E-73 548.0 32.0 391 1-422 24-448 (453)
5 2rkv_A Trichothecene 3-O-acety 100.0 7.9E-66 2.7E-70 525.3 34.1 400 1-426 7-449 (451)
6 1q9j_A PAPA5, polyketide synth 98.7 1.9E-06 6.4E-11 85.6 21.9 254 37-315 36-314 (422)
7 2jgp_A Tyrocidine synthetase 3 98.1 7.8E-05 2.7E-09 76.2 17.3 187 115-315 198-401 (520)
8 1l5a_A Amide synthase, VIBH; n 98.0 9.4E-05 3.2E-09 73.6 16.1 186 116-315 103-305 (436)
9 2xhg_A Tyrocidine synthetase A 97.9 0.00098 3.3E-08 66.8 21.7 193 115-316 124-337 (466)
10 3fot_A 15-O-acetyltransferase; 97.9 0.00044 1.5E-08 70.5 18.0 164 129-294 177-365 (519)
11 4hvm_A Tlmii; PSI-biology, mid 97.9 0.00016 5.4E-09 73.4 14.4 188 116-315 119-328 (493)
12 2vsq_A Surfactin synthetase su 97.6 0.0027 9.1E-08 72.3 19.5 191 115-315 123-328 (1304)
13 3cla_A Type III chloramphenico 73.7 2.2 7.6E-05 37.7 3.4 29 130-158 181-209 (213)
14 2i9d_A Chloramphenicol acetylt 72.2 2.5 8.6E-05 37.4 3.4 28 130-157 189-216 (217)
15 1q23_A Chloramphenicol acetylt 72.1 2.5 8.6E-05 37.5 3.4 29 130-158 185-213 (219)
16 3b8k_A PDCE2;, dihydrolipoylly 70.1 3.1 0.00011 37.4 3.6 29 130-158 204-232 (239)
17 3rqc_A Probable lipoamide acyl 68.3 2.9 9.9E-05 37.2 2.9 30 130-159 187-216 (224)
18 1dpb_A Dihydrolipoyl-transacet 68.3 3.4 0.00011 37.3 3.4 30 130-159 208-237 (243)
19 1scz_A E2, dihydrolipoamide su 68.2 3.4 0.00012 37.0 3.4 30 130-159 196-225 (233)
20 2ii3_A Lipoamide acyltransfera 66.8 3.7 0.00013 37.5 3.4 30 130-159 224-253 (262)
21 3mae_A 2-oxoisovalerate dehydr 61.5 5.4 0.00018 36.3 3.4 31 130-160 210-240 (256)
22 3l60_A Branched-chain alpha-ke 60.3 5.9 0.0002 35.9 3.4 30 130-159 205-234 (250)
23 2k1o_A Putative; repressor, tr 48.8 35 0.0012 22.8 4.7 42 205-253 13-54 (66)
24 1x93_A Hypothetical protein HP 45.4 22 0.00074 23.0 3.2 22 208-229 2-23 (55)
25 3dva_I Dihydrolipoyllysine-res 41.7 5.5 0.00019 39.2 0.0 30 130-159 391-420 (428)
26 2xl1_A Arginine attenuator pep 38.8 19 0.00064 19.2 1.8 17 234-250 8-24 (26)
No 1
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=2.9e-76 Score=596.51 Aligned_cols=386 Identities=34% Similarity=0.575 Sum_probs=320.0
Q ss_pred CCccccccCCCCccEEEEeeCCCCCCCcccchhhHhHhhHHHHHHHHHHhhhhcccCCcccCCCeeEEeCCCCeEEEEEE
Q 042198 1 LCLLDQFRNNVYAPRVLYYPLNQDDLSSAIDIDHIVSKRLQLLKQSLSETLVRFYPLAGKLTNNFSVDCNDEGVYFVEAV 80 (437)
Q Consensus 1 LS~lD~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~~~~~i~~~~~Gv~f~~a~ 80 (437)
||+|||++++.|++.+|||+.++... .+.. .++++ ||+||+++|++||||||||+++++|+||++||.|++|+
T Consensus 28 LS~lD~~~~~~~~~~~~~y~~~~~~~---~~~~-~~~~~---Lk~sLs~~L~~~~plAGRl~~~~~i~c~~~Gv~fv~A~ 100 (421)
T 2bgh_A 28 ISHLDQLLLTCHIPFILFYPNPLDSN---LDPA-QTSQH---LKQSLSKVLTHFYPLAGRINVNSSVDCNDSGVPFVEAR 100 (421)
T ss_dssp CCHHHHTSCSSEEEEEEEECCCSSCC---CCHH-HHHHH---HHHHHHHHTTTSGGGGSEEETTTEEECCCCCEEEEEEE
T ss_pred CChHHhcccccccceEEEEeCCCccc---cchh-hHHHH---HHHHHHHHhhhcchhccccCCCcEEEEcCCceEEEEEE
Confidence 79999998889999999998654310 1244 67899 99999999999999999999889999999999999999
Q ss_pred ecccHHHhcCC-CCcccccccCCCCCCccCC-CCCCcce-eEEEEEEecCCeEEEeecccccccchhhHHHHHHHHHHHH
Q 042198 81 AKSLLNELLIQ-PDPSLRNKLFPVDGSQQRG-QVAGAHV-AKVQVTSFACGGLVICACISHTFGDGTSFSSFMKAWAATA 157 (437)
Q Consensus 81 ~~~~~~~l~~~-p~~~~~~~l~P~~~~~~~~-~~~~~~P-l~vQvt~f~cGG~~L~~~~~H~v~Dg~~~~~fl~~wa~~~ 157 (437)
++++++++... |+...++.|+|... ...+ ....+.| +.+|||+|+|||++||+++||.++||.|+.+|+++||++|
T Consensus 101 ~d~~l~~~~~~~p~~~~~~~l~p~~~-~~~~~~~~~~~pll~vQvt~f~cgG~~lg~~~~H~v~Dg~~~~~fl~~wa~~~ 179 (421)
T 2bgh_A 101 VQAQLSQAIQNVVELEKLDQYLPSAA-YPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFLNAWTATC 179 (421)
T ss_dssp ESSCHHHHHSCCSSGGGGGGGSSSCS-SSSSSSCCCTTCSEEEEEEECTTSCEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred EcCCHHHHhccCCChHHHHhcCCCCC-CccccccccCCceEEEEEEEEcCCCEEEEEEeeEEechHHHHHHHHHHHHHHh
Confidence 99999999875 66556778888763 2000 0134578 9999999999999999999999999999999999999999
Q ss_pred ccCCcccccccCCCCccC-ccccCC-CCCcchhhhhhhcccccccccccCCeEEEEEEecHHHHHHHHHHhhcCCC-CCC
Q 042198 158 RNKTSEEQAIYTCPNYDA-SSLFLP-NEDDLFHQLRAISNVSYTRFFETGRFVTRRFVFDAEAIAELKDKAKSSRV-QNP 234 (437)
Q Consensus 158 rg~~~~~~~~~~~P~~dr-~~l~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~-~~~ 234 (437)
||.. .. ..|.+|| +.+.++ ++.|. . .+....++++++|+|++++|++||+++.++.. .++
T Consensus 180 rg~~--~~---~~P~~dr~~~l~p~~~~~~~-~-----------~~~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~ 242 (421)
T 2bgh_A 180 RGET--EI---VLPNFDLAARHFPPVDNTPS-P-----------ELVPDENVVMKRFVFDKEKIGALRAQASSASEEKNF 242 (421)
T ss_dssp TTCS--CC---CCCBCSHHHHHSCCCTTCCC-C-----------CCCCCSSEEEEEEEECHHHHHHHHHHTC-----CCC
T ss_pred cCCC--CC---CCCccccccccCCCcccCCC-C-----------ccCCccceEEEEEEECHHHHHHHHHHhhccCCCCCC
Confidence 9975 22 5688999 767665 44332 1 11234578899999999999999999976532 679
Q ss_pred CHHHHHHHHHHHHHHhhhccCCCCCCceEEEEEeccccccCCCCCcCcccceeeeeeeeeccCC-CChHHHHHHHHHHHH
Q 042198 235 TRIEALSAILSRSIMAVLNKKSSSHRPTLLSHAVNLRTKARPPLSEYLIGNIVWQTNALCTEEE-VDLDGLVWLLREAIS 313 (437)
Q Consensus 235 St~dal~A~lW~~~~~ar~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~-~~l~~~A~~Ir~~i~ 313 (437)
|+||+|+|++|+|++|||....+.++++.+.++||+|+|++||+|++||||++..+.+.+++++ .+|+++|.+||+++.
T Consensus 243 St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP~~y~GN~~~~~~~~~~~~~~~~l~~~a~~ir~ai~ 322 (421)
T 2bgh_A 243 SRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYAMGNIATLLFAAVDAEWDKDFPDLIGPLRTSLE 322 (421)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEEEESGGGSSSCCCTTBCSCCEEEEEEEECTTCCCCGGGGHHHHHHHTC
T ss_pred chhHhHHHHHHHHHHHHhcccCCCCCceEEEEEecCccccCCCCCCCccceEEEEEEEEecccccccHHHHHHHHHHHHH
Confidence 9999999999999999987543335789999999999999999999999999999988888765 899999999999999
Q ss_pred hhhhhhHhhhccccchHHHHHHHHHHHhhccCCCCcEEEeccCCCCCCCcccCCCccceeeeccCCCCccccCCEEEEee
Q 042198 314 KFDGDFVKNLQGVGGLLELSEAIKHEAEAYSDAKNRIMFSSWCTFGSYGIDFGWGKPIWVSCVGLDGSILEFSPVVILMD 393 (437)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~~~~DFG~GkP~~v~~~~~~~~~~~~~g~~~i~p 393 (437)
++++++++...+ +.+..... .+.+.+++|||++|++|++|||||||.++++...+. +|+++++|
T Consensus 323 ~~~~~~~~~~~~----------~~~~~~~~-~~~~~~~vssw~~~~~y~~DFGwGkP~~v~~~~~~~-----~g~~~~~p 386 (421)
T 2bgh_A 323 KTEDDHNHELLK----------GMTCLYEL-EPQELLSFTSWCRLGFYDLDFGWGKPLSACTTTFPK-----RNAALLMD 386 (421)
T ss_dssp CCSSCHHHHHHH----------HHHHHHTS-CGGGEEEEEEETTSCGGGCCSSSCCCSEEECCCCCS-----TTEEEEEE
T ss_pred HHHHHHHHHHHH----------HHHHhhcc-CCCCeEEEeccccCCCcccccCCCccCeecccccCc-----CCEEEEEe
Confidence 999888775432 22222111 122459999999999999999999999999876554 79999999
Q ss_pred CCCCCcEEEEEEcCHHHHHHHhcChhhhhhhccCCC
Q 042198 394 TRFGDGIEAWVSLLEEDMALLEVDKNLLEFATIDPS 429 (437)
Q Consensus 394 ~~~~~g~ev~v~L~~~~m~~l~~d~~~~~~~~~~~~ 429 (437)
+++++|++|.|+|++++|++|++ ||.+|+++||+
T Consensus 387 ~~~~~gi~v~v~L~~~~m~~f~~--e~~~~~~~~~~ 420 (421)
T 2bgh_A 387 TRSGDGVEAWLPMAEDEMAMLPV--ELLSLVDSDFS 420 (421)
T ss_dssp CTTSSSEEEEEEEEHHHHHHSCH--HHHTTBCCCCC
T ss_pred cCCCCeEEEEEEcCHHHHHHHHH--HHHHhhcCCCC
Confidence 98888999999999999999998 99999999997
No 2
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=8.1e-75 Score=588.96 Aligned_cols=383 Identities=23% Similarity=0.337 Sum_probs=305.6
Q ss_pred CCccccccCCCCccEEEEeeCCCCCCCcccchhhHhHhhHHHHHHHHHHhhhhcccCCcccC----CCeeEEeCCCCeEE
Q 042198 1 LCLLDQFRNNVYAPRVLYYPLNQDDLSSAIDIDHIVSKRLQLLKQSLSETLVRFYPLAGKLT----NNFSVDCNDEGVYF 76 (437)
Q Consensus 1 LS~lD~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~----~~~~i~~~~~Gv~f 76 (437)
||+||+++++.|++.+|||+.++.. . . ..+++ ||+||+++|++||||||||+ ++++|+||++||.|
T Consensus 29 LS~lD~~~~~~~~~~~~~y~~~~~~-----~-~-~~~~~---Lk~sLs~~L~~f~plAGRl~~~~~g~~~i~c~~~Gv~f 98 (439)
T 4g22_A 29 NSNVDLVVPNFHTPSVYFYRPTGSS-----N-F-FDAKV---LKDALSRALVPFYPMAGRLKRDEDGRIEIECNGEGVLF 98 (439)
T ss_dssp CCHHHHSCCTTCCCEEEEECCCSCT-----T-T-TCHHH---HHHHHHHHTTTTGGGGCEEEECTTSCEEEECCCCCEEE
T ss_pred CChhHhCccccceeeEEEEcCCCCc-----c-c-cHHHH---HHHHHHHHHhhccccceeeeeCCCCCEEEEECCCCCEE
Confidence 8999999889999999999865432 1 2 45788 99999999999999999997 47999999999999
Q ss_pred EEEEecccHHHhcCCCCcccccccCCCCCCccCCCCCCcce-eEEEEEEecCCeEEEeecccccccchhhHHHHHHHHHH
Q 042198 77 VEAVAKSLLNELLIQPDPSLRNKLFPVDGSQQRGQVAGAHV-AKVQVTSFACGGLVICACISHTFGDGTSFSSFMKAWAA 155 (437)
Q Consensus 77 ~~a~~~~~~~~l~~~p~~~~~~~l~P~~~~~~~~~~~~~~P-l~vQvt~f~cGG~~L~~~~~H~v~Dg~~~~~fl~~wa~ 155 (437)
+||++|++++|+........+++|+|..... ....+.| +.||||+|+|||++||+++||.++||.|+.+|+++||+
T Consensus 99 v~A~~d~~l~~l~~~~p~~~~~~l~p~~~~~---~~~~~~pll~vQvT~f~cGG~~lg~~~~H~v~Dg~~~~~Fl~~wa~ 175 (439)
T 4g22_A 99 VEAESDGVVDDFGDFAPTLELRRLIPAVDYS---QGISSYALLVLQVTYFKCGGVSLGVGMRHHAADGFSGLHFINSWSD 175 (439)
T ss_dssp EEEEESSCGGGGTTCCCCGGGGGGSCCCCTT---SCTTSSCSEEEEEEECTTSCEEEEEEECTTTCCHHHHHHHHHHHHH
T ss_pred EEEEcCCcHHHhcCCCCCHHHHhcCCCCCcc---cccccCceeEEEEEEecCCCEEEEEEeeeccCcHHHHHHHHHHHHH
Confidence 9999999999996632233567788865432 2234578 99999999999999999999999999999999999999
Q ss_pred HHccCCcccccccCCCCccCccccCCCCCcchh-hhhhhccc--ccccc----ccc-CCeEEEEEEecHHHHHHHHHHhh
Q 042198 156 TARNKTSEEQAIYTCPNYDASSLFLPNEDDLFH-QLRAISNV--SYTRF----FET-GRFVTRRFVFDAEAIAELKDKAK 227 (437)
Q Consensus 156 ~~rg~~~~~~~~~~~P~~dr~~l~~~~~~p~~~-~~~~~~~~--~~~~~----~~~-~~~~~~~f~fs~~~l~~Lk~~a~ 227 (437)
+|||.. . . .+|++||+.+. +++.|... ....+... ..... ... .++++++|+|++++|++||+++.
T Consensus 176 ~~rg~~--~--~-~~P~~dr~~l~-~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs~~~i~~LK~~a~ 249 (439)
T 4g22_A 176 MARGLD--V--T-LPPFIDRTLLR-ARDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIFKLTREQISALKAKSK 249 (439)
T ss_dssp HHTTCC--C--S-SCCBCCGGGGC-CCSSCCCSSCCGGGSCCC---------------CEEEEEEEECHHHHHHHHHGGG
T ss_pred HhCCCC--C--C-CCCcccccccc-CCCCCCCCcCcccccCCCCCcccccccccCCcccceEEEEEECHHHHHHHHHHhh
Confidence 999975 2 2 67999998554 23333211 00000000 00000 111 57899999999999999999997
Q ss_pred cCC-CCCCCHHHHHHHHHHHHHHhhhccCCCCCCceEEEEEeccccccCCCCCcCcccceeeeeeeeeccCC---CChHH
Q 042198 228 SSR-VQNPTRIEALSAILSRSIMAVLNKKSSSHRPTLLSHAVNLRTKARPPLSEYLIGNIVWQTNALCTEEE---VDLDG 303 (437)
Q Consensus 228 ~~~-~~~~St~dal~A~lW~~~~~ar~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~---~~l~~ 303 (437)
++. ..++|+||+|+|++|+|++|||...+ ++++++.++||+|+|++||+|++||||++..+.+.++++| .+|++
T Consensus 250 ~~~~~~~~St~dal~A~iWr~~~rAr~~~~--~~~~~l~~~vd~R~rl~Pplp~~Y~GN~v~~~~~~~~~~el~~~~L~~ 327 (439)
T 4g22_A 250 EDGNTISYSSYEMLAGHVWRCACKARGLEV--DQGTKLYIATDGRARLRPSLPPGYFGNVIFTATPIAIAGDLEFKPVWY 327 (439)
T ss_dssp GGGCCCCCCHHHHHHHHHHHHHHHHTTCCT--TCEEEEEEEEECTTTSSSCCCTTBCSCCEEEECCEEEHHHHHHSCHHH
T ss_pred ccCCCCCccHHHHHHHHHHHHHHHhcCCCC--CCcEEEEEEEcccCCCCCCCCCCcccceeehhhcceEHHHHhhCcHHH
Confidence 653 46799999999999999999997643 4789999999999999999999999999999998888876 79999
Q ss_pred HHHHHHHHHHhhhhhhHhhhccccchHHHHHHHHHHHhhc-----cCCCCcEEEeccCCCCCCCcccCCCccceeeeccC
Q 042198 304 LVWLLREAISKFDGDFVKNLQGVGGLLELSEAIKHEAEAY-----SDAKNRIMFSSWCTFGSYGIDFGWGKPIWVSCVGL 378 (437)
Q Consensus 304 ~A~~Ir~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ssw~~~~~~~~DFG~GkP~~v~~~~~ 378 (437)
+|.+||+++++++++|+++.++ +++. .++...+ ..+...+++|||+||++|++|||||||+++++...
T Consensus 328 ~A~~Ir~ai~~~~~e~~~~~~~------~~~~-~~~~~~~~~~~~~~~~~~~~vssw~r~~~y~~DFGwGkP~~~~~~~~ 400 (439)
T 4g22_A 328 AASKIHDALARMDNDYLRSALD------YLEL-QPDLKALVRGAHTFKCPNLGITSWVRLPIHDADFGWGRPIFMGPGGI 400 (439)
T ss_dssp HHHHHHHHHHTCSHHHHHHHHH------HHHT-CSCSTTCCCCHHHHCTTCEEEEECTTSCTTCCCCSSCCCSEEEESSC
T ss_pred HHHHHHHHHHhhCHHHHHHHHH------HHHh-CccchhhcccCCcCcCCcEEEeecCcCCccccccCCCCcceeecccc
Confidence 9999999999999999998665 3321 1111111 11123499999999999999999999999998765
Q ss_pred CCCccccCCEEEEeeCCCC-CcEEEEEEcCHHHHHHHhc
Q 042198 379 DGSILEFSPVVILMDTRFG-DGIEAWVSLLEEDMALLEV 416 (437)
Q Consensus 379 ~~~~~~~~g~~~i~p~~~~-~g~ev~v~L~~~~m~~l~~ 416 (437)
.. +|.++++|++++ ||++|.|+|++++|++|++
T Consensus 401 ~~-----~g~~~~~p~~~~~ggi~v~v~L~~~~m~~f~~ 434 (439)
T 4g22_A 401 AY-----EGLSFILPSPTNDGSMSVAISLQGEHMKLFQS 434 (439)
T ss_dssp CS-----TTEEEEEECTTCSSCEEEEEEEEHHHHHHHHH
T ss_pred CC-----CcEEEEeecCCCCCcEEEEEECCHHHHHHHHH
Confidence 54 899999998654 5899999999999999986
No 3
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=4.8e-69 Score=549.16 Aligned_cols=390 Identities=22% Similarity=0.273 Sum_probs=298.7
Q ss_pred CCcccccc-CCCCccEEEEeeCCCCCCCcccc--hhhHhHhhHHHHHHHHHHhhhhcccCCcccC--C----CeeEEeC-
Q 042198 1 LCLLDQFR-NNVYAPRVLYYPLNQDDLSSAID--IDHIVSKRLQLLKQSLSETLVRFYPLAGKLT--N----NFSVDCN- 70 (437)
Q Consensus 1 LS~lD~~~-~~~y~~~~~~f~~~~~~~~~~~~--~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~--~----~~~i~~~- 70 (437)
||+||++. ...|++.+|||+.++.. + .+ .++++ ||+||+++|++||||||||+ + +++|+|+
T Consensus 29 LS~lD~~~~~~~~~~~~~~y~~~~~~-----~~~~~-~~~~~---Lk~sLs~~L~~~~plAGRl~~~~~~~g~~~i~c~~ 99 (454)
T 2e1v_A 29 LTFFDFFWLRSPPINNLFFYELPITR-----SQFTE-TVVPN---IKHSLSITLKHFYPFVGKLVVYPAPTKKPEICYVE 99 (454)
T ss_dssp CCHHHHTTTTCCCEEEEEEEECCCCH-----HHHHH-THHHH---HHHHHHHHHTTCGGGGSEEEECSSSSSCCEEEECT
T ss_pred CchHHhhhhccCCccEEEEEeCCCCc-----chhhH-HHHHH---HHHHHHHHhhhccccceeeeeccCCCCCEEEEECC
Confidence 79999984 45699999999865431 2 33 56888 99999999999999999997 2 6899999
Q ss_pred CCCeEEEEEEecccHHHhcCC-C-CcccccccCCCCCCccCCCCCCcce-eEEEEEEecCCeEEEeecccccccchhhHH
Q 042198 71 DEGVYFVEAVAKSLLNELLIQ-P-DPSLRNKLFPVDGSQQRGQVAGAHV-AKVQVTSFACGGLVICACISHTFGDGTSFS 147 (437)
Q Consensus 71 ~~Gv~f~~a~~~~~~~~l~~~-p-~~~~~~~l~P~~~~~~~~~~~~~~P-l~vQvt~f~cGG~~L~~~~~H~v~Dg~~~~ 147 (437)
++||.|+||+++.+++++... + ....++.|+|.........+..+.| +.+|||+|+|||++||+++||.++||.|++
T Consensus 100 ~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cgG~~lg~~~~H~v~Dg~~~~ 179 (454)
T 2e1v_A 100 GDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLFPNQGIAIGITNHHCLGDASTRF 179 (454)
T ss_dssp TCCEEEEEEEECSCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEEEEETTTEEEEEEEECGGGCCHHHHH
T ss_pred CCcEEEEEEEeCCCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEEEEEEEecCCcEEEEEEeeeeecchhHHH
Confidence 599999999999999999753 2 2345677888654320001123458 999999999999999999999999999999
Q ss_pred HHHHHHHHHHc-cCCccc-ccccCCCCccCccccCCCCCcchhh--hhhhcccc------cccccccCCeEEEEEEecHH
Q 042198 148 SFMKAWAATAR-NKTSEE-QAIYTCPNYDASSLFLPNEDDLFHQ--LRAISNVS------YTRFFETGRFVTRRFVFDAE 217 (437)
Q Consensus 148 ~fl~~wa~~~r-g~~~~~-~~~~~~P~~dr~~l~~~~~~p~~~~--~~~~~~~~------~~~~~~~~~~~~~~f~fs~~ 217 (437)
+|+++||++|| |..... .+....|.+|| .+. +.| +.. ...+.... +.......+.++++|+|+++
T Consensus 180 ~Fl~awa~~~r~g~~~~~~~~~~~~P~~dr-~l~---~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~ 254 (454)
T 2e1v_A 180 CFLKAWTSIARSGNNDESFLANGTRPLYDR-IIK---YPM-LDEAYLKRAKVESFNEDYVTQSLAGPSDKLRATFILTRA 254 (454)
T ss_dssp HHHHHHHHHHHTTSCCHHHHHHSCCCBCCC-CCC---CHH-HHHHHHHHTTCTTHHHHCCCCCCCCCCCEEEEEEEECHH
T ss_pred HHHHHHHHHhccCCCccccCCCCCCCcccc-cCC---CCC-cchHHHHhhhccccccccCcccCCCCCCceEEEEEECHH
Confidence 99999999999 752000 00115689999 553 112 211 01110000 01001235678999999999
Q ss_pred HHHHHHHHhhcCCC--CCCCHHHHHHHHHHHHHHhhhccCCCCCCceEEEEEeccccccCCCCCcCcccceeeeeeeeec
Q 042198 218 AIAELKDKAKSSRV--QNPTRIEALSAILSRSIMAVLNKKSSSHRPTLLSHAVNLRTKARPPLSEYLIGNIVWQTNALCT 295 (437)
Q Consensus 218 ~l~~Lk~~a~~~~~--~~~St~dal~A~lW~~~~~ar~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~ 295 (437)
+|++||+++.++.. .++|+||+|+|++|+|++||| + ++++++.++||+|+|++||+|++||||++..+.+.++
T Consensus 255 ~i~~LK~~a~~~~~~~~~~St~d~l~A~lWr~~~~Ar---~--~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~~~~~~ 329 (454)
T 2e1v_A 255 VINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSR---N--DKLQLFGFPIDRRARMKPPIPTAYFGNCVGGCAAIAK 329 (454)
T ss_dssp HHHHHHHHHHHHCTTCSCCCHHHHHHHHHHHHHHHHH---C--CSEEEEEEEEECGGGSSSCCCTTBCSCCEEEEEEEEE
T ss_pred HHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhc---C--CCceEEEEEecchhccCCCCCcccccceeeeEEeecc
Confidence 99999999976432 579999999999999999998 2 4789999999999999999999999999999998888
Q ss_pred cCC----CChHHHHHHHHHHHHhhhhhhHhhhccccchHHHHHHHHHHHhhccCCCCcEEEeccCCCCCCCcccCCCccc
Q 042198 296 EEE----VDLDGLVWLLREAISKFDGDFVKNLQGVGGLLELSEAIKHEAEAYSDAKNRIMFSSWCTFGSYGIDFGWGKPI 371 (437)
Q Consensus 296 ~~~----~~l~~~A~~Ir~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~~~~DFG~GkP~ 371 (437)
++| .+|+++|.+||+++++++++|+++.+... +.+ |.+....+..+ ..+++|||++|++|++|||||||+
T Consensus 330 ~~el~~~~~l~~~a~~Ir~ai~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~-~~~~vssw~~~~~y~~DFG~G~P~ 403 (454)
T 2e1v_A 330 TNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKDD-MES----FNDLVSEGMPT-TMTWVSGTPKLRFYDMDFGWGKPK 403 (454)
T ss_dssp GGGTSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC----------CHHHHHCCCS-EEEEEECCTTSCGGGCCSSSCSCS
T ss_pred hhhccccccHHHHHHHHHHHHHhhhhhhhHHHHHHH-HHH----HHHHHHhhcCC-ceEEEecCCCCCcccccccCccce
Confidence 875 58999999999999999866666654410 111 33322222222 259999999999999999999999
Q ss_pred eeeeccCCCCccccCCEEEEeeCCCCC-cEEEEEEcCHHHHHHHhcChhhhh
Q 042198 372 WVSCVGLDGSILEFSPVVILMDTRFGD-GIEAWVSLLEEDMALLEVDKNLLE 422 (437)
Q Consensus 372 ~v~~~~~~~~~~~~~g~~~i~p~~~~~-g~ev~v~L~~~~m~~l~~d~~~~~ 422 (437)
++++...+. +|+++|+|+++++ |++|.|+|++++|++|++ ++.+
T Consensus 404 ~v~~~~~~~-----~g~~~l~p~~~~~ggi~v~v~L~~~~m~~f~~--~~~~ 448 (454)
T 2e1v_A 404 KLETVSIDH-----NGAISINSCKESNEDLEIGVCISATQMEDFVH--IFDD 448 (454)
T ss_dssp EEEEGGGGG-----SSEEEEEECSSCTTSEEEEEEEEHHHHHHHHH--HHHH
T ss_pred EEEeeeeCC-----CCeEEEEecCCCCCCEEEEEEECHHHHHHHHH--HHHH
Confidence 999876654 7899999987654 899999999999999965 5543
No 4
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=7e-69 Score=547.95 Aligned_cols=391 Identities=21% Similarity=0.256 Sum_probs=300.6
Q ss_pred CCcccccc-CCCCccEEEEeeCCCCCCCcccc--hhhHhHhhHHHHHHHHHHhhhhcccCCcccC------CCeeEEeC-
Q 042198 1 LCLLDQFR-NNVYAPRVLYYPLNQDDLSSAID--IDHIVSKRLQLLKQSLSETLVRFYPLAGKLT------NNFSVDCN- 70 (437)
Q Consensus 1 LS~lD~~~-~~~y~~~~~~f~~~~~~~~~~~~--~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~------~~~~i~~~- 70 (437)
||+||++. ...|++.+|||+.++.. + .+ .++++ ||+||+++|++||||||||+ ++++|+|+
T Consensus 24 LS~lD~~~~~~~~~~~~~~y~~~~~~-----~~~~~-~~~~~---Lk~sLs~~L~~~~plAGRl~~~~~~~g~~~i~c~~ 94 (453)
T 2xr7_A 24 LTYFDHVWLAFHRMRRILFYKLPISR-----PDFVQ-TIIPT---LKDSLSLTLKYYLPLAGNVACPQDWSGYPELRYVT 94 (453)
T ss_dssp CCHHHHGGGGSCCEEEEEEEECCCCS-----HHHHH-THHHH---HHHHHHHHHTTSGGGGSCCEEESSTTCCCEEEEET
T ss_pred CCHHHhhhhhcCCccEEEEEeCCCCC-----chhHH-HHHHH---HHHHHHHHhhhccccCeeEEccCCCCCCEEEEecC
Confidence 89999984 45699999999876432 2 34 57889 99999999999999999994 36899999
Q ss_pred CCCeEEEEEEecccHHHhcCC--CCcccccccCCCCCCccCCCCCCcce-eEEEEEEecCCeEEEeecccccccchhhHH
Q 042198 71 DEGVYFVEAVAKSLLNELLIQ--PDPSLRNKLFPVDGSQQRGQVAGAHV-AKVQVTSFACGGLVICACISHTFGDGTSFS 147 (437)
Q Consensus 71 ~~Gv~f~~a~~~~~~~~l~~~--p~~~~~~~l~P~~~~~~~~~~~~~~P-l~vQvt~f~cGG~~L~~~~~H~v~Dg~~~~ 147 (437)
++||.|+||+++.+++++... +....++.|+|............+.| +.+|||+|+|||++||+++||.++||.|++
T Consensus 95 ~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~~~H~v~Dg~~~~ 174 (453)
T 2xr7_A 95 GNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPNHGISIGFTNHHVAGDGATIV 174 (453)
T ss_dssp TCCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEECCCEEEEEEEETTTEEEEEEEECTTTCCSHHHH
T ss_pred CCceEEEEEecCCCHHHhhccCCCChhhhhcCCCCCCCcccccccccCCeEEEEEEEccCCcEEEEEeeeeeeechhHHH
Confidence 599999999999999999752 23445677888654320000011268 999999999999999999999999999999
Q ss_pred HHHHHHHHHHc-cCCc-ccccccCCCCccCccccCCCCCcchhhhhhhcc-ccc-cc--ccccCCeEEEEEEecHHHHHH
Q 042198 148 SFMKAWAATAR-NKTS-EEQAIYTCPNYDASSLFLPNEDDLFHQLRAISN-VSY-TR--FFETGRFVTRRFVFDAEAIAE 221 (437)
Q Consensus 148 ~fl~~wa~~~r-g~~~-~~~~~~~~P~~dr~~l~~~~~~p~~~~~~~~~~-~~~-~~--~~~~~~~~~~~f~fs~~~l~~ 221 (437)
+|+++||++|| |... ..+.. ..|++||+.+.+|...+. .....+.. ... +. .....++++++|+|++++|++
T Consensus 175 ~Fl~~wa~~~r~G~~~~~~~~~-~~P~~dr~~l~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~ 252 (453)
T 2xr7_A 175 KFVRAWALLNKFGGDEQFLANE-FIPFYDRSVIKDPNGVGM-SIWNEMKKYKHMMKMSDVVTPPDKVRGTFIITRHDIGK 252 (453)
T ss_dssp HHHHHHHHHHHTTTCGGGSCGG-GSCBCCCSSSCCSSCHHH-HTTTTGGGCTTTSCCSCCCCCCSCCCEEEEECHHHHHH
T ss_pred HHHHHHHHHhhcCCCcccCCCC-CCCccccccccCCCCcch-HHHHhccccCCccccccccCCCCceEEEEEECHHHHHH
Confidence 99999999999 7621 01112 468999987764432110 00000100 000 00 012346778999999999999
Q ss_pred HHHHhhcCCC--CCCCHHHHHHHHHHHHHHhhhccC--C-CCCCceEEEEEeccccccCCCCCcCcccceeeeeeeeecc
Q 042198 222 LKDKAKSSRV--QNPTRIEALSAILSRSIMAVLNKK--S-SSHRPTLLSHAVNLRTKARPPLSEYLIGNIVWQTNALCTE 296 (437)
Q Consensus 222 Lk~~a~~~~~--~~~St~dal~A~lW~~~~~ar~~~--~-~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~ 296 (437)
||+++.++.. .++|+||+|+|++|+|++|||... . ++++++.+.++||+|+|++||+|++||||++..+.+.+++
T Consensus 253 Lk~~a~~~~~~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~~~~~~~ 332 (453)
T 2xr7_A 253 LKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCAADCRAQFNPPLPPSYFGNALVGYVARTRQ 332 (453)
T ss_dssp HHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEECCTTSCSSSCCCTTBCSCCCCEEEEEEEH
T ss_pred HHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEEecccccCCCCCCcccccceeeeeeeeeeH
Confidence 9999976432 579999999999999999999752 1 2357899999999999999999999999999999888877
Q ss_pred CC----CChHHHHHHHHHHHHh--hhhh-hHhhhccccchHHHHHHHHHHHhhccCCCCcEEEeccCCCCCCCcccCCCc
Q 042198 297 EE----VDLDGLVWLLREAISK--FDGD-FVKNLQGVGGLLELSEAIKHEAEAYSDAKNRIMFSSWCTFGSYGIDFGWGK 369 (437)
Q Consensus 297 ~~----~~l~~~A~~Ir~~i~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~~~~DFG~Gk 369 (437)
+| .+|+++|.+||+++++ ++++ ++++ + ++ +..+.+..+ ..+++|||++|++|++||||||
T Consensus 333 ~el~~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~--~------~~----~~~~~~~~~-~~~~vssw~~~~~y~~DFG~G~ 399 (453)
T 2xr7_A 333 VDLAGKEGFTIAVELIGEAIRKRMKDEEWILSG--S------WF----KEYDKVDAK-RSLSVAGSPKLDLYAADFGWGR 399 (453)
T ss_dssp HHHTSSSHHHHHHHHHHHHHTTSSSCHHHHHSS--C------TT----SCCCCSCGG-GEEEECSCSSCCGGGCCCSSCS
T ss_pred HHhcCcchHHHHHHHHHHHHHhhccCCccchhh--H------HH----HHHHhhccC-CcEEEeccccCCccccccCCCc
Confidence 63 6899999999999999 5677 8876 3 22 111112112 3599999999999999999999
Q ss_pred cceeeeccCCCCccccCC--EEEEeeCCCCC-cEEEEEEcCHHHHHHHhcChhhhh
Q 042198 370 PIWVSCVGLDGSILEFSP--VVILMDTRFGD-GIEAWVSLLEEDMALLEVDKNLLE 422 (437)
Q Consensus 370 P~~v~~~~~~~~~~~~~g--~~~i~p~~~~~-g~ev~v~L~~~~m~~l~~d~~~~~ 422 (437)
|.++++...+. +| +++|+|+++++ |++|.|+|++++|++|++ ++.+
T Consensus 400 P~~v~~~~~~~-----~g~~~~~l~~~~~~~ggi~v~v~L~~~~m~~f~~--~~~~ 448 (453)
T 2xr7_A 400 PEKLEFVSIDN-----DDGISMSLSKSKDSDGDLEIGLSLSKTRMNAFAA--MFTH 448 (453)
T ss_dssp CSEEEEGGGSS-----CSSCEEEEEECSSSTTCEEEEECCCHHHHHHHHH--HHHH
T ss_pred ceEEEeeeecC-----CCceEEEEeecCCCCCCEEEEEEeCHHHHHHHHH--HHHH
Confidence 99999876654 78 88889877654 899999999999999965 5544
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=7.9e-66 Score=525.30 Aligned_cols=400 Identities=19% Similarity=0.194 Sum_probs=297.9
Q ss_pred CCcccccc--CCCCccEEEEeeCCCCCCCcccchhhHhHhhHHHHHHHHHHhhhhcccCCcccC---------CCeeEEe
Q 042198 1 LCLLDQFR--NNVYAPRVLYYPLNQDDLSSAIDIDHIVSKRLQLLKQSLSETLVRFYPLAGKLT---------NNFSVDC 69 (437)
Q Consensus 1 LS~lD~~~--~~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~---------~~~~i~~ 69 (437)
||.|||+. ++.|++.+|||+.++.. +.+ .++++ ||+||+++|++||||||||+ ++++|+|
T Consensus 7 Ls~lD~~~~~~~~y~~~~~~y~~~~~~-----~~~-~~~~~---Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~ 77 (451)
T 2rkv_A 7 LDTLGQLPGLLSIYTQISLLYPVSDSS-----QYP-TIVST---FEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVP 77 (451)
T ss_dssp CCGGGGCTTGGGCEEEEEEEEECSCGG-----GHH-HHHHH---HHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEEC
T ss_pred CChhhcCccccccceeEEEEEECCCCC-----CHH-HHHHH---HHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEee
Confidence 79999997 68999999999864321 344 67899 99999999999999999985 1478888
Q ss_pred CCCCeEEEEEEecc-----cHHHhcC-CCCccccc--ccCCCCCCccC--CCCCCcce-eEEEEEEecCCeEEEeecccc
Q 042198 70 NDEGVYFVEAVAKS-----LLNELLI-QPDPSLRN--KLFPVDGSQQR--GQVAGAHV-AKVQVTSFACGGLVICACISH 138 (437)
Q Consensus 70 ~~~Gv~f~~a~~~~-----~~~~l~~-~p~~~~~~--~l~P~~~~~~~--~~~~~~~P-l~vQvt~f~cGG~~L~~~~~H 138 (437)
+++++.|++++++. +++++.. ......+. .+.|....... .....+.| +.+|||+| |||++||+++||
T Consensus 78 ~~~~~~~~va~~~~d~~~p~~~~l~~~~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT~~-~GG~~lg~~~~H 156 (451)
T 2rkv_A 78 FEDVPRVVVKDLRDDPSAPTIEGMRKAGYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNFI-KGGLILTVNGQH 156 (451)
T ss_dssp CCSSCEEEEEECTTCTTSCBHHHHHHHTSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEEEE-BTEEEEEEEEET
T ss_pred cCCCCeEEEEeCCCCCCCCCHHHHHHcCCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEEEEEe-cCceeeeeeehh
Confidence 77777799988764 5777753 22121222 24443311100 01223478 99999965 799999999999
Q ss_pred cccchhhHHHHHHHHHHHHccCCcccccccCCCCccCccccCCC--CCcc--hhhhhhhcccccc---cccccCCeEEEE
Q 042198 139 TFGDGTSFSSFMKAWAATARNKTSEEQAIYTCPNYDASSLFLPN--EDDL--FHQLRAISNVSYT---RFFETGRFVTRR 211 (437)
Q Consensus 139 ~v~Dg~~~~~fl~~wa~~~rg~~~~~~~~~~~P~~dr~~l~~~~--~~p~--~~~~~~~~~~~~~---~~~~~~~~~~~~ 211 (437)
.++||.|+++||++||++|||........ .+|++||+.+.|.. ..|. +.. ..+.. .+. ......++++++
T Consensus 157 ~v~Dg~g~~~Fl~awa~~~rg~~~~~~~~-~~p~~dr~~~~p~~~~~~p~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~ 233 (451)
T 2rkv_A 157 GAMDMVGQDAVIRLLSKACRNDPFTEEEM-TAMNLDRKTIVPYLENYTIGPEVDH-QIVKA-DVAGGDAVLTPVSASWAF 233 (451)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCCCHHHH-HHTTCCSTTSSCCCTTCCCCGGGTT-CBCCT-TSCC-------CCEEEEE
T ss_pred ccccHHHHHHHHHHHHHHhcCCCCCcccc-ccccCchhhccccccccCCCccccc-cccCC-CCCCCCCCCCCCCceEEE
Confidence 99999999999999999999865100001 35889987665432 2221 110 00000 000 112245688999
Q ss_pred EEecHHHHHHHHHHhhcCC---CCCCCHHHHHHHHHHHHHHhhhccCCCCCCceEEEEEeccccccCCCCCcCcccceee
Q 042198 212 FVFDAEAIAELKDKAKSSR---VQNPTRIEALSAILSRSIMAVLNKKSSSHRPTLLSHAVNLRTKARPPLSEYLIGNIVW 288 (437)
Q Consensus 212 f~fs~~~l~~Lk~~a~~~~---~~~~St~dal~A~lW~~~~~ar~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~ 288 (437)
|+|++++|++||+++.++. ..++|+||+|+|++|+|++|||....++++++++.++||+|+|++ +|++||||++.
T Consensus 234 f~f~~~~i~~LK~~a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~--lP~~y~GN~~~ 311 (451)
T 2rkv_A 234 FTFSPKAMSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARPAMG--VSNNYPGLLQN 311 (451)
T ss_dssp EEECHHHHHHHHHHHHTTCCTTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEEEECHHHHT--CCTTCCSCCEE
T ss_pred EEECHHHHHHHHHHHhhhccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEEecccccCC--CCCCCccccee
Confidence 9999999999999998653 357999999999999999999832123357899999999999998 88999999999
Q ss_pred eeeeeeccCC---CChHHHHHHHHHHHHhhhhhh-HhhhccccchHHHHHHHHHHHhhc--c---CCCCcEEEeccCCCC
Q 042198 289 QTNALCTEEE---VDLDGLVWLLREAISKFDGDF-VKNLQGVGGLLELSEAIKHEAEAY--S---DAKNRIMFSSWCTFG 359 (437)
Q Consensus 289 ~~~~~~~~~~---~~l~~~A~~Ir~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~ssw~~~~ 359 (437)
.+.+.++++| .+|+++|.+||+++.+++.++ +++.++ +++.. .+...+ . .....+++|||++|+
T Consensus 312 ~~~~~~~~~el~~~~L~~~a~~ir~ai~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~ssw~~~~ 384 (451)
T 2rkv_A 312 MTYHNSTIGEIANESLGATASRLRSELDPASMRQRTRGLAT------YLHNN-PDKSNVSLTADADPSTSVMLSSWAKVG 384 (451)
T ss_dssp EEEEEEEHHHHHHSCHHHHHHHHHTTCCHHHHHHHHHHHHH------HHHHC-SCCTTBCTTTTCCTTTCEEEEECTTCC
T ss_pred eecccCcHHHhccchHHHHHHHHHHHhcccCchhHHHHHHH------HHhcC-CCccccccccccCCCCCEEEeccccCC
Confidence 9988888776 899999999999999998888 887654 33311 111111 1 112249999999999
Q ss_pred CCCcccC--CCccceeeeccCCCCccccCCEEEEeeCCCCCcEEEEEEcCHHHHHHHhcChhhhhhhcc
Q 042198 360 SYGIDFG--WGKPIWVSCVGLDGSILEFSPVVILMDTRFGDGIEAWVSLLEEDMALLEVDKNLLEFATI 426 (437)
Q Consensus 360 ~~~~DFG--~GkP~~v~~~~~~~~~~~~~g~~~i~p~~~~~g~ev~v~L~~~~m~~l~~d~~~~~~~~~ 426 (437)
+|++||| ||||++++.+..... +|+++++|++.+||++|.|+|++++|++|++|+||.+|++.
T Consensus 385 ~y~~DFG~gwG~P~~v~~~~~~~~----~g~~~~~p~~~~ggi~v~v~L~~~~m~~f~~d~ef~~~~~~ 449 (451)
T 2rkv_A 385 LWDYDFGLGLGKPETVRRPIFEPV----ESLMYFMPKKPDGEFCAALSLRDEDMDRLKADKEWTKYAQY 449 (451)
T ss_dssp GGGCCTTCSSCSCSEEECCBCSCC----TTEEEECCCCTTSCEEEEEEEEHHHHHHHHHCHHHHTTCEE
T ss_pred ccccccCCCCCCceEEEcCCccCC----CCEEEEecCCCCCCEEEEEEeCHHHHHHHhcCHHHHhhhee
Confidence 9999998 899999987654322 78999998766679999999999999999999999999875
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=98.69 E-value=1.9e-06 Score=85.62 Aligned_cols=254 Identities=13% Similarity=0.083 Sum_probs=136.3
Q ss_pred HhhHHHHHHHHHHhhhhcccCCcccCCCeeEEeCCCCeEEEEEEeccc---HHHhcCCCCcccccccCCCCCCccCCCCC
Q 042198 37 SKRLQLLKQSLSETLVRFYPLAGKLTNNFSVDCNDEGVYFVEAVAKSL---LNELLIQPDPSLRNKLFPVDGSQQRGQVA 113 (437)
Q Consensus 37 ~~~~~~L~~sL~~~L~~~p~laGrl~~~~~i~~~~~Gv~f~~a~~~~~---~~~l~~~p~~~~~~~l~P~~~~~~~~~~~ 113 (437)
.++ |++++.+++..+|.|--++... ++..+..+....+.. ..++........+.. . ... .+
T Consensus 36 ~~~---l~~A~~~lv~rh~~LRt~f~~~-----~~~~~q~v~~~~~~~~~~~~d~~~~~~~~~~~~---~-~~~---~d- 99 (422)
T 1q9j_A 36 VDA---LSDAFDALLETHPVLASHLEQS-----SDGGWNLVADDLLHSGICVIDGTAATNGSPSGN---A-ELR---LD- 99 (422)
T ss_dssp HHH---HHHHHHHHHHHCGGGSEEEEEC-----TTSSEEEEECCSSSCCCEEEC---------------C-CCC---CC-
T ss_pred HHH---HHHHHHHHHHhCccceEEEEec-----CCcceeeeccCCCCCceEEEECCCCCcchhhhc---c-cCc---cC-
Confidence 567 9999999999999998877410 111111221111111 111111110000100 0 001 12
Q ss_pred Ccce-eEEEEEEecCCeEEEeecccccccchhhHHHHHHHHHHHHcc----CCcccccccCCCCcc--------Ccccc-
Q 042198 114 GAHV-AKVQVTSFACGGLVICACISHTFGDGTSFSSFMKAWAATARN----KTSEEQAIYTCPNYD--------ASSLF- 179 (437)
Q Consensus 114 ~~~P-l~vQvt~f~cGG~~L~~~~~H~v~Dg~~~~~fl~~wa~~~rg----~~~~~~~~~~~P~~d--------r~~l~- 179 (437)
...| +++.+.. ..++..|.+.+||.++||.|+..|++.|.+++++ .. ..+....+..+ +....
T Consensus 100 ~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~Y~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (422)
T 1q9j_A 100 QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVDELFSRYTDAVTTGD--PGPITPQPTPLSMEAVLAQRGIRKQ 176 (422)
T ss_dssp TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHHSSS--CCCCCCCCCCBCHHHHHHHSSCCC-
T ss_pred CCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHHHHHHHHHHHhhccCC--CCCCCCCCCCCCHHHHHHhcCCccc
Confidence 3467 8888777 6688999999999999999999999999999873 22 11010111111 00000
Q ss_pred -CCCCCc-chhhhhh-hccc--cc--ccccccCCeEEEEEEecHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHhhh
Q 042198 180 -LPNEDD-LFHQLRA-ISNV--SY--TRFFETGRFVTRRFVFDAEAIAELKDKAKSSRVQNPTRIEALSAILSRSIMAVL 252 (437)
Q Consensus 180 -~~~~~p-~~~~~~~-~~~~--~~--~~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~St~dal~A~lW~~~~~ar 252 (437)
.+.... ....|+. +... .+ .+...........+.++++..++|++.|.. ..+|.+.++.|.+-..+.|-+
T Consensus 177 ~~~~~~~~~~~~W~~~l~~~~~lp~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~---~~~t~~~~l~aa~~~~l~r~~ 253 (422)
T 1q9j_A 177 GLSGAERFMSVMYAYEIPATETPAVLAHPGLPQAVPVTRLWLSKQQTSDLMAFGRE---HRLSLNAVVAAAILLTEWQLR 253 (422)
T ss_dssp ----CTTSSTTTTCC-------------CCSBCCCCEEEECCCHHHHHHHHHHHTT---TTCCHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhhhhhhhcccCCCcccCCCCCCCCCCCCccceEEEeCHHHHHHHHHHHHH---hCCCHHHHHHHHHHHHHHhcc
Confidence 000000 0011110 0000 00 001111223567889999999999999875 358899998887655555442
Q ss_pred ccCCCCCCceEEEEEeccccccCCCCCcCcccceeeeeeeeeccC-CCChHHHHHHHHHHHHhh
Q 042198 253 NKKSSSHRPTLLSHAVNLRTKARPPLSEYLIGNIVWQTNALCTEE-EVDLDGLVWLLREAISKF 315 (437)
Q Consensus 253 ~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~-~~~l~~~A~~Ir~~i~~~ 315 (437)
.. + .....+..++++|....|+++..=+.|.+.+....++.. +.++.++++.+++.+.+.
T Consensus 254 ~~--~-~~~v~~g~~~~~R~~~~~~~~~~~~~~~vG~f~n~lp~~~~~~~~~~l~~v~~~~~~~ 314 (422)
T 1q9j_A 254 NT--P-HVPIPYVYPVDLRFVLAPPVAPTEATNLLGAASYLAEIGPNTDIVDLASDIVATLRAD 314 (422)
T ss_dssp TC--S-SCCEEEEEEEETTTTSSSCCCTTTBSCCEEEEEEEECCCSSCCHHHHHHHHHHHHHHH
T ss_pred cC--C-CceEEEeeeeecccccCCCCChhhhhhhheeeeeeeeccCCCCHHHHHHHHHHHHHHH
Confidence 21 1 256889999999998765543111233333332333443 257888888888877654
No 7
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.10 E-value=7.8e-05 Score=76.22 Aligned_cols=187 Identities=10% Similarity=0.020 Sum_probs=116.2
Q ss_pred cce-eEEEEEEecCCeEEEeecccccccchhhHHHHHHHHHHHHccCCcccccccCCCCcc-----CccccCCCCCcchh
Q 042198 115 AHV-AKVQVTSFACGGLVICACISHTFGDGTSFSSFMKAWAATARNKTSEEQAIYTCPNYD-----ASSLFLPNEDDLFH 188 (437)
Q Consensus 115 ~~P-l~vQvt~f~cGG~~L~~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~~~~~~P~~d-----r~~l~~~~~~p~~~ 188 (437)
..| +++.+-....+...|.+.+||.++||.|+..|++.+.+.+++.. .++. ..+..| +.....+.......
T Consensus 198 ~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~el~~~Y~~~~--l~~~-~~~~~d~~~~~~~~~~~~~~~~~~~ 274 (520)
T 2jgp_A 198 VAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSSGILLAEWVQLYQGDV--LPEL-RIQYKDFAVWQQEFSQSAAFHKQEA 274 (520)
T ss_dssp SSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHHHHHHHHHHHHHTTCC--CCCC-SCCHHHHHHHHHHHTTSHHHHHHHH
T ss_pred CCcceeEEEEEEcCCcEEEEEEccceeecHhHHHHHHHHHHHHHccCC--CCCC-CCCHHHHHHHHHHhhcChhhHHHHH
Confidence 356 77777766657899999999999999999999999999998753 1100 111111 10000000000001
Q ss_pred hhhh-hcccc-----c----ccccccCCeEEEEEEecHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHhhhccCCCC
Q 042198 189 QLRA-ISNVS-----Y----TRFFETGRFVTRRFVFDAEAIAELKDKAKSSRVQNPTRIEALSAILSRSIMAVLNKKSSS 258 (437)
Q Consensus 189 ~~~~-~~~~~-----~----~~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~St~dal~A~lW~~~~~ar~~~~~~ 258 (437)
.|+. +.... | .+...........+.++.+..++|++.|... .+|.+.++.|.+-..+.+-.+
T Consensus 275 yW~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~---~~T~~~~l~aa~a~~L~~~~~----- 346 (520)
T 2jgp_A 275 YWLQTFADDIPVLNLPTDFTRPSTQSFAGDQCTIGAGKALTEGLHQLAQAT---GTTLYMVLLAAYNVLLAKYAG----- 346 (520)
T ss_dssp HHHHHTSSCCCCCCCCCSSCCCSSCCCBEEEEEEECCHHHHHHHHHHHHHH---TCCHHHHHHHHHHHHHHHHHT-----
T ss_pred HHHHHhCCCCCcCCCCCCCCCCCCCCCCccEEEEeCCHHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHHhcC-----
Confidence 1211 11100 0 0111122345678899999999999988753 478888888865444444432
Q ss_pred CCceEEEEEeccccccCCCCCcCcccceeeeeeeeeccCC-CChHHHHHHHHHHHHhh
Q 042198 259 HRPTLLSHAVNLRTKARPPLSEYLIGNIVWQTNALCTEEE-VDLDGLVWLLREAISKF 315 (437)
Q Consensus 259 ~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~-~~l~~~A~~Ir~~i~~~ 315 (437)
.+...+..++++|..- --++.+|+++.....+..... .++.++++.+++.+.+.
T Consensus 347 ~~dv~~g~~~~gR~~~---~~~~~vG~f~n~lplr~~~~~~~~~~~~l~~v~~~~~~~ 401 (520)
T 2jgp_A 347 QEDIIVGTPITGRSHA---DLEPIVGMFVNTLAMRNKPQREKTFSEFLQEVKQNALDA 401 (520)
T ss_dssp CSCEEEEEEECCCCSG---GGTTCCSCCCEEEEEEECCCTTSBHHHHHHHHHHHHHHH
T ss_pred CCCeEEEeccCCCCch---hhhccEEeeeeeeeEEecCCCCCCHHHHHHHHHHHHHHH
Confidence 2568999999999752 235667887766666665543 68889998888887654
No 8
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.04 E-value=9.4e-05 Score=73.64 Aligned_cols=186 Identities=14% Similarity=0.048 Sum_probs=114.8
Q ss_pred ce-eEEEEEEecCCeEEEeecccccccchhhHHHHHHHHHHHHccCCcccccccCCC--Ccc------CccccCCCCCcc
Q 042198 116 HV-AKVQVTSFACGGLVICACISHTFGDGTSFSSFMKAWAATARNKTSEEQAIYTCP--NYD------ASSLFLPNEDDL 186 (437)
Q Consensus 116 ~P-l~vQvt~f~cGG~~L~~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~~~~~~P--~~d------r~~l~~~~~~p~ 186 (437)
.| +++.+-....+...|.+.+||.++||.|+..|++.+.+++.+...+.. . ..| .+. +..+........
T Consensus 103 ~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (436)
T 1l5a_A 103 APITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQT-P-TAAFKPYQSYLEEEAAYLTSHRYWQD 180 (436)
T ss_dssp SCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCC-C-CCCCCCHHHHHHHHHHHHTSHHHHHH
T ss_pred CCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCC-C-CCCccCHHHHHHHHHHhhccHhHHHH
Confidence 46 777776666578999999999999999999999999999874210011 1 111 110 000000000000
Q ss_pred hhhhhh-hcccc-----ccc-ccccCCeEEEEEEecHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHhhhccCCCCC
Q 042198 187 FHQLRA-ISNVS-----YTR-FFETGRFVTRRFVFDAEAIAELKDKAKSSRVQNPTRIEALSAILSRSIMAVLNKKSSSH 259 (437)
Q Consensus 187 ~~~~~~-~~~~~-----~~~-~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~St~dal~A~lW~~~~~ar~~~~~~~ 259 (437)
...|+. +.... +.. ...........+.++.+..++|++.|... .+|.+.++.|.+-..+.+-.+
T Consensus 181 ~~~W~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~---~~t~~~~l~aa~~~~L~~~~g------ 251 (436)
T 1l5a_A 181 KQFWQGYLREAPDLTLTSATYDPQLSHAVSLSYTLNSQLNHLLLKLANAN---QIGWPDALVALCALYLESAEP------ 251 (436)
T ss_dssp HHHHHHHHHTSCCCCBCCTTCCGGGCCEEEEEEECCHHHHHHHHHHHHHT---TCCHHHHHHHHHHHHHHHHST------
T ss_pred HHHHHHHhcCCCCcccCCCCCCCCcccceeeEEecCHHHHHHHHHHHHHh---CCCHHHHHHHHHHHHHHHhhC------
Confidence 011211 11100 000 01122345788899999999999998863 488898888875444444321
Q ss_pred CceEEEEEeccccccCCCCCcCcccceeeeeeeeeccCC-CChHHHHHHHHHHHHhh
Q 042198 260 RPTLLSHAVNLRTKARPPLSEYLIGNIVWQTNALCTEEE-VDLDGLVWLLREAISKF 315 (437)
Q Consensus 260 ~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~-~~l~~~A~~Ir~~i~~~ 315 (437)
+...+..++++|.. + --.+-+|+++........... .++.+++..+++.+.+.
T Consensus 252 ~dv~ig~~~~~R~~--~-~~~~~vG~f~n~lplr~~~~~~~t~~~~l~~v~~~~~~~ 305 (436)
T 1l5a_A 252 DAPWLWLPFMNRWG--S-VAANVPGLMVNSLPLLRLSAQQTSLGNYLKQSGQAIRSL 305 (436)
T ss_dssp TCCEEEEEECCCTT--S-GGGGSCSCCCEEEEEECCCCTTCBHHHHHHHHHHHHHHH
T ss_pred CceEEeeecccCCC--h-HHhcCcceEEEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 35789999999965 2 235667877766666665543 68999999999887664
No 9
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=97.95 E-value=0.00098 Score=66.78 Aligned_cols=193 Identities=13% Similarity=0.050 Sum_probs=115.2
Q ss_pred cce-eEEEEEEecCCeEEEeecccccccchhhHHHHHHHHHHHHccCC-cccccccCC-C-Ccc------CccccCCCCC
Q 042198 115 AHV-AKVQVTSFACGGLVICACISHTFGDGTSFSSFMKAWAATARNKT-SEEQAIYTC-P-NYD------ASSLFLPNED 184 (437)
Q Consensus 115 ~~P-l~vQvt~f~cGG~~L~~~~~H~v~Dg~~~~~fl~~wa~~~rg~~-~~~~~~~~~-P-~~d------r~~l~~~~~~ 184 (437)
..| +++.+-... ++-.|-+.+||.++||.|+..|++.+.+++++.. +..... .+ + .+. +..+......
T Consensus 124 ~~pl~r~~l~~~~-~~~~l~l~~HH~i~Dg~S~~~l~~el~~~Y~~~~~g~~~~l-~~~~~~y~~~~~~~~~~~~~~~~~ 201 (466)
T 2xhg_A 124 EGPLVKVALFQTL-HGDHLFLAIHHLVVDGISWRILFEDLATGYAQALAGQAISL-PEKTDSFQSWSQWLQEYANEADLL 201 (466)
T ss_dssp TCCCEEEEEEEET-TEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCCCCC-CCCCSCHHHHHHHHHHHTTSHHHH
T ss_pred CCCeEEEEEEEcC-CCCEEEEEeeeeeechhhHHHHHHHHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHHHHHhcCccch
Confidence 356 877777777 4545779999999999999999999999886421 101101 11 1 110 0000000000
Q ss_pred cchhhhhh-hcc----cccc----cccccCCeEEEEEEecHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHhhhccC
Q 042198 185 DLFHQLRA-ISN----VSYT----RFFETGRFVTRRFVFDAEAIAELKDKAKSSRVQNPTRIEALSAILSRSIMAVLNKK 255 (437)
Q Consensus 185 p~~~~~~~-~~~----~~~~----~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~St~dal~A~lW~~~~~ar~~~ 255 (437)
.....|+. +.. ..+. +...........+.++++..++|++.+... ..+|.++++.|.+-..+.+-.+
T Consensus 202 ~~~~~W~~~l~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~--~~~t~~~~llaa~~~~l~~~~~-- 277 (466)
T 2xhg_A 202 SEIPYWESLESQAKNVSLPKDYEVTDCKQKSVRNMRIRLHPEETEQLLKHANQA--YQTEINDLLLAALGLAFAEWSK-- 277 (466)
T ss_dssp TTHHHHHHHHHHCCCCCCCCSSCCSSCBGGGEEEEEEECCHHHHHHHHHTGGGT--TTCCHHHHHHHHHHHHHHHHHC--
T ss_pred hhhHHHHHhhccCCcccCCccccccccccccceEEEEEcCHHHHHHHHHHhHHh--hCCCHHHHHHHHHHHHHHHHhC--
Confidence 00111211 110 0010 001122345678899999999999877532 3478888888876555554432
Q ss_pred CCCCCceEEEEEeccccccCC-CCCcCcccceeeeeeeeeccCC-CChHHHHHHHHHHHHhhh
Q 042198 256 SSSHRPTLLSHAVNLRTKARP-PLSEYLIGNIVWQTNALCTEEE-VDLDGLVWLLREAISKFD 316 (437)
Q Consensus 256 ~~~~~~~~l~~~vd~R~rl~p-plp~~Y~GN~~~~~~~~~~~~~-~~l~~~A~~Ir~~i~~~~ 316 (437)
.....+.+++++|....+ +--.+-+|+++........... .++.+++..|++.+..+.
T Consensus 278 ---~~dv~ig~~~~gR~~~~~~~~~~~~vG~f~n~lplr~~~~~~~~~~~~l~~v~~~~~~~~ 337 (466)
T 2xhg_A 278 ---LAQIVIHLEGHGREDIIEQANVARTVGWFTSQYPVLLDLKQTAPLSDYIKLTKENMRKIP 337 (466)
T ss_dssp ---CSEEEEEEEECCCCSCSTTCCCTTCCSCCCEEEEEEEECSCCCSHHHHHHHHHHHHHHSG
T ss_pred ---CCceEEEecCCCCCccccCCCccccccceeeeccEEEecCCCCCHHHHHHHHHHHHHhCc
Confidence 246889999999976421 1234667777766666665543 689999999999887763
No 10
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=97.89 E-value=0.00044 Score=70.52 Aligned_cols=164 Identities=12% Similarity=0.030 Sum_probs=97.9
Q ss_pred eEEEeecccccccchhhHHHHHHHHHHHHccCCcc-cccccCCCCcc----CccccCCC----CCcc------hhh-hhh
Q 042198 129 GLVICACISHTFGDGTSFSSFMKAWAATARNKTSE-EQAIYTCPNYD----ASSLFLPN----EDDL------FHQ-LRA 192 (437)
Q Consensus 129 G~~L~~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~-~~~~~~~P~~d----r~~l~~~~----~~p~------~~~-~~~ 192 (437)
-.-|.+.+||.++||.|...|++.+-+......+. .. . ..|.++ .+.|.|+- ..|. ... +..
T Consensus 177 ~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~-~-~~~~~~~g~E~~~L~P~~e~~~~~p~~~~~~e~~~~~~~ 254 (519)
T 3fot_A 177 TVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDS-R-EMKKIQWGQEIKNLSPPVVDSLKLDINTLGSEFDDKCTE 254 (519)
T ss_dssp EEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CG-G-GSCCCCTTTTGGGSCCCTGGGBSSCGGGCCHHHHHHHHH
T ss_pred eEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCCc-c-CCCcCCCCcccccCCcCHHHHhCCCCCCCCHHHHHHHHH
Confidence 45677788999999999999999998877642210 00 1 223332 12233331 1221 110 111
Q ss_pred ----h-cc--ccc-ccccccCCeEEEEEEecHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHhhhcc-CCCCCCceE
Q 042198 193 ----I-SN--VSY-TRFFETGRFVTRRFVFDAEAIAELKDKAKSSRVQNPTRIEALSAILSRSIMAVLNK-KSSSHRPTL 263 (437)
Q Consensus 193 ----~-~~--~~~-~~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~St~dal~A~lW~~~~~ar~~-~~~~~~~~~ 263 (437)
+ .. ... +.......-....+.|+++..++|++.|++..++.+|-..+|.|.+-.++.+.... .........
T Consensus 255 ~~~~~~~~~~~~~~P~~~~~~~~~~~~~~ls~~~t~~L~~~ck~~~~~g~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~ 334 (519)
T 3fot_A 255 YTSALVANYKSRGMKFQPGLALPRCVIHKLSADESIDIVKAVKTRLGPGFTISHLTQAAIVLALLDHLKPNDLSDDEVFI 334 (519)
T ss_dssp HHHHHHHHHHSCCSBCCCCCCCEEEEEEECCHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHC----CCTTCCEE
T ss_pred HHHHhhcCCCcccCCCCCCCCCcceEEEEcCHHHHHHHHHHHHhcCCCCeeHHHHHHHHHHHHHHhhcCCcccCCCccEE
Confidence 1 00 010 11111233456788999999999999998754446899999977765555553211 111124578
Q ss_pred EEEEeccccccCCCCCcCcccceeeeeeeee
Q 042198 264 LSHAVNLRTKARPPLSEYLIGNIVWQTNALC 294 (437)
Q Consensus 264 l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~ 294 (437)
..++||+|+++.++.-.+|||.++.......
T Consensus 335 ~~~pvnlR~~l~~~~~~n~~~~~~~~~~~~v 365 (519)
T 3fot_A 335 SPTSVDGRRWLREDIASNFYAMCQTAAVVRI 365 (519)
T ss_dssp EEEEEECGGGBCHHHHTSCCSCCEEEEEEEE
T ss_pred EEeeeeccccCCCcccccccceeeeeeeeEe
Confidence 9999999999987666678888877554443
No 11
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=97.87 E-value=0.00016 Score=73.40 Aligned_cols=188 Identities=10% Similarity=-0.035 Sum_probs=109.4
Q ss_pred ce-eEEEEEEecCCeEEEeecccccccchhhHHHHHHHHHHHHccCCcccccccCCCCccCccccCC---CCCcch----
Q 042198 116 HV-AKVQVTSFACGGLVICACISHTFGDGTSFSSFMKAWAATARNKTSEEQAIYTCPNYDASSLFLP---NEDDLF---- 187 (437)
Q Consensus 116 ~P-l~vQvt~f~cGG~~L~~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~~~~~~P~~dr~~l~~~---~~~p~~---- 187 (437)
.| +++.+-....+...|.+.+||.++||.|+..+++.+.+++.|.. . ..+..+-...... ...+..
T Consensus 119 ~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~l~~~l~~~Y~g~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (493)
T 4hvm_A 119 DPLVRLHLVRLSETDVVLGVVAHQMLLDARSRYMVLGAVWQAYYGRF---R---PAQYRDFAEVADFHPLDRETVRVARH 192 (493)
T ss_dssp SCSEEEEEEECSSSEEEEEEEEETTTCCHHHHHHHHHHHHHHHTTCC---C---GGGSBCGGGTTTCCTTCSHHHHHHHH
T ss_pred CCeEEEEEEEECCCcEEEEEecchhhccHHHHHHHHHHHHHHhCCCC---C---CcCHHHHHHHHhhhhcccChhhHHHH
Confidence 46 77777777756789999999999999999999999999997654 1 1111110000000 000111
Q ss_pred hhhhhhcccccc---cccccCCeEEEEEEecHHHHHHHHHHhhcCCCCCCC--HHHHHHHHHHHHHHhhhcc------CC
Q 042198 188 HQLRAISNVSYT---RFFETGRFVTRRFVFDAEAIAELKDKAKSSRVQNPT--RIEALSAILSRSIMAVLNK------KS 256 (437)
Q Consensus 188 ~~~~~~~~~~~~---~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~S--t~dal~A~lW~~~~~ar~~------~~ 256 (437)
..|+..-...++ ............+.++.+..++|++.|.. ..+| .+.++.|.+-..+.+-+.. ..
T Consensus 193 ~~W~~~l~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~---~~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~ 269 (493)
T 4hvm_A 193 RWWSRRLPALPVRGGDGGPVGPPETSRLRVPGSRWQALTEPGGP---LGGNGSLAMAALTAWWLWTQGAGTGTDTGAGTG 269 (493)
T ss_dssp HHHHHHGGGSCCCC-------CCEEEEEEEEHHHHHHHHCC---------CHHHHHHHHHHHHHHHC-------------
T ss_pred HHHHHhccCCCCCCCCCCCCCCCeeEEEEcCHHHHHHHHHHHHH---cCCCchHHHHHHHHHHHHHHHhhhcccccccCc
Confidence 112211001110 00011125677899999999999988775 3578 8888888754444443100 00
Q ss_pred CCCCceEEEEEeccccccCCCCCcCcccceeeeeeeeeccC---CCChHHHHHHHHHHHHhh
Q 042198 257 SSHRPTLLSHAVNLRTKARPPLSEYLIGNIVWQTNALCTEE---EVDLDGLVWLLREAISKF 315 (437)
Q Consensus 257 ~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~---~~~l~~~A~~Ir~~i~~~ 315 (437)
.......+..++++|..- --.+.+|+++......+... +.++.+++..+++.+.+.
T Consensus 270 ~g~~dv~~g~~~~gR~~~---~~~~~vG~f~n~lplr~~~~~~~~~t~~~~l~~v~~~~~~~ 328 (493)
T 4hvm_A 270 TGKDSLYLSTEVDLRDHL---QLGSVVGPLTDRVVFGVDLTGLREPSFRDLMSRTQAGFLDA 328 (493)
T ss_dssp ---CEEEEEEEEEHHHHT---TCCSBCSCCEEEEEEEEECTTCSSCBHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeeccCCCCc---chhcCeEeeeceeEEEEecCCCcCCCHHHHHHHHHHHHHHH
Confidence 113568999999999762 34567788876665555443 367889998888877664
No 12
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=97.55 E-value=0.0027 Score=72.32 Aligned_cols=191 Identities=15% Similarity=0.083 Sum_probs=115.9
Q ss_pred cce-eEEEEEEecCCeEEEeecccccccchhhHHHHHHHHHHHHccCCcccccccCCC--Cc-cCc-cccCCCCCcchhh
Q 042198 115 AHV-AKVQVTSFACGGLVICACISHTFGDGTSFSSFMKAWAATARNKTSEEQAIYTCP--NY-DAS-SLFLPNEDDLFHQ 189 (437)
Q Consensus 115 ~~P-l~vQvt~f~cGG~~L~~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~~~~~~P--~~-dr~-~l~~~~~~p~~~~ 189 (437)
..| +++.+-....+...|.+.+||.++||.|+..+++.+++++++...+.... .+| .+ |-. .+...........
T Consensus 123 ~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~~~-l~~~~~y~d~~~~~~~~~~~~~~~y 201 (1304)
T 2vsq_A 123 RDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALREQKPYS-LPPVKPYKDYIKWLEKQDKQASLRY 201 (1304)
T ss_dssp TSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCCCC-CCCCCCTHHHHHHHHTSCHHHHHHH
T ss_pred CCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhcCCCCC-CCCcccHHHHHHHHhcchhhHHHHH
Confidence 356 88888777767899999999999999999999999999887522001101 111 11 100 0000000000111
Q ss_pred hhh-hccc-----ccc---cccccCCeEEEEEEecHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHhhhccCCCCCC
Q 042198 190 LRA-ISNV-----SYT---RFFETGRFVTRRFVFDAEAIAELKDKAKSSRVQNPTRIEALSAILSRSIMAVLNKKSSSHR 260 (437)
Q Consensus 190 ~~~-~~~~-----~~~---~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~St~dal~A~lW~~~~~ar~~~~~~~~ 260 (437)
|+. +... .+. +...........+.++++..++||+.|... .+|.+.++.|.+-..+.|-.+ .+
T Consensus 202 W~~~L~~~~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~---~~T~~~vllaa~a~~L~r~tg-----~~ 273 (1304)
T 2vsq_A 202 WREYLEGFEGQTTFAEQRKKQKDGYEPKELLFSPSEAETKAFTELAKSQ---HTTLSTALQAVWSVLISRYQQ-----SG 273 (1304)
T ss_dssp HHHHHTTCCCCCTTTTTCCCSSCCCCEEEEEECCCHHHHHHHHHHHHHT---TCCHHHHHHHHHHHHHHHHHT-----CS
T ss_pred HHHHhCCCCccccCCCCCCccccccCcceEEEecCHHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHHhcC-----CC
Confidence 211 1100 000 001122345677889999999999999863 478888887765444443322 25
Q ss_pred ceEEEEEeccccccCCCCCcCcccceeeeeeeeeccCC-CChHHHHHHHHHHHHhh
Q 042198 261 PTLLSHAVNLRTKARPPLSEYLIGNIVWQTNALCTEEE-VDLDGLVWLLREAISKF 315 (437)
Q Consensus 261 ~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~-~~l~~~A~~Ir~~i~~~ 315 (437)
...+..++++|.+-.+.+ ++.+|+.+.....+..... .++.++...+++...+.
T Consensus 274 dvv~G~pvsgR~~~~~~~-~~~vG~fvntlplr~~~~~~~s~~~ll~~v~~~~~~a 328 (1304)
T 2vsq_A 274 DLAFGTVVSGRPAEIKGV-EHMVGLFINVVPRRVKLSEGITFNGLLKRLQEQSLQS 328 (1304)
T ss_dssp EEEEEEEECCCCTTSTTG-GGCCSSCCEEEEEEEECCTTCBHHHHHHHHHHHHHHH
T ss_pred CEEEEEEeCCCCccchhh-hcccccceeEEEEEecCCCCCcHHHHHHHHHHHHHHh
Confidence 689999999997633222 4566777666656665543 78999999999887654
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=73.68 E-value=2.2 Score=37.69 Aligned_cols=29 Identities=17% Similarity=0.330 Sum_probs=26.3
Q ss_pred EEEeecccccccchhhHHHHHHHHHHHHc
Q 042198 130 LVICACISHTFGDGTSFSSFMKAWAATAR 158 (437)
Q Consensus 130 ~~L~~~~~H~v~Dg~~~~~fl~~wa~~~r 158 (437)
+-|++++||.++||.-...|++.+.+...
T Consensus 181 m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 181 LPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 67899999999999999999999998764
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=72.20 E-value=2.5 Score=37.45 Aligned_cols=28 Identities=32% Similarity=0.379 Sum_probs=25.3
Q ss_pred EEEeecccccccchhhHHHHHHHHHHHH
Q 042198 130 LVICACISHTFGDGTSFSSFMKAWAATA 157 (437)
Q Consensus 130 ~~L~~~~~H~v~Dg~~~~~fl~~wa~~~ 157 (437)
+-|++++||.++||.-...|++.+.+..
T Consensus 189 m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 189 MPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 5789999999999999999999998754
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=72.15 E-value=2.5 Score=37.50 Aligned_cols=29 Identities=10% Similarity=0.235 Sum_probs=26.6
Q ss_pred EEEeecccccccchhhHHHHHHHHHHHHc
Q 042198 130 LVICACISHTFGDGTSFSSFMKAWAATAR 158 (437)
Q Consensus 130 ~~L~~~~~H~v~Dg~~~~~fl~~wa~~~r 158 (437)
+-|++++||.+.||.-...|++.+.+...
T Consensus 185 m~lsls~DHRvvDG~~aa~Fl~~lk~~le 213 (219)
T 1q23_A 185 MPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEchhhChHHHHHHHHHHHHHHh
Confidence 67899999999999999999999998764
No 16
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=70.10 E-value=3.1 Score=37.42 Aligned_cols=29 Identities=10% Similarity=0.211 Sum_probs=27.1
Q ss_pred EEEeecccccccchhhHHHHHHHHHHHHc
Q 042198 130 LVICACISHTFGDGTSFSSFMKAWAATAR 158 (437)
Q Consensus 130 ~~L~~~~~H~v~Dg~~~~~fl~~wa~~~r 158 (437)
+-|++++||.++||.-...|++.+.+...
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le 232 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLE 232 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence 78999999999999999999999998775
No 17
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=68.32 E-value=2.9 Score=37.25 Aligned_cols=30 Identities=13% Similarity=0.267 Sum_probs=27.2
Q ss_pred EEEeecccccccchhhHHHHHHHHHHHHcc
Q 042198 130 LVICACISHTFGDGTSFSSFMKAWAATARN 159 (437)
Q Consensus 130 ~~L~~~~~H~v~Dg~~~~~fl~~wa~~~rg 159 (437)
+-|+++++|.+.||.-...|++.+.+....
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le~ 216 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIED 216 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHhC
Confidence 458999999999999999999999998764
No 18
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=68.29 E-value=3.4 Score=37.31 Aligned_cols=30 Identities=13% Similarity=0.164 Sum_probs=27.3
Q ss_pred EEEeecccccccchhhHHHHHHHHHHHHcc
Q 042198 130 LVICACISHTFGDGTSFSSFMKAWAATARN 159 (437)
Q Consensus 130 ~~L~~~~~H~v~Dg~~~~~fl~~wa~~~rg 159 (437)
+-|+++++|.+.||.-...|++.+.+....
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 237 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLAD 237 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHhC
Confidence 579999999999999999999999988753
No 19
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=68.18 E-value=3.4 Score=37.01 Aligned_cols=30 Identities=13% Similarity=0.241 Sum_probs=27.3
Q ss_pred EEEeecccccccchhhHHHHHHHHHHHHcc
Q 042198 130 LVICACISHTFGDGTSFSSFMKAWAATARN 159 (437)
Q Consensus 130 ~~L~~~~~H~v~Dg~~~~~fl~~wa~~~rg 159 (437)
+-|+++++|.+.||.-...|++.+.+....
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 225 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLED 225 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 569999999999999999999999988754
No 20
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=66.81 E-value=3.7 Score=37.48 Aligned_cols=30 Identities=23% Similarity=0.434 Sum_probs=27.2
Q ss_pred EEEeecccccccchhhHHHHHHHHHHHHcc
Q 042198 130 LVICACISHTFGDGTSFSSFMKAWAATARN 159 (437)
Q Consensus 130 ~~L~~~~~H~v~Dg~~~~~fl~~wa~~~rg 159 (437)
+-|+++++|.+.||.-...|++.+.+....
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le~ 253 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLEN 253 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHhC
Confidence 568999999999999999999999988753
No 21
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=61.55 E-value=5.4 Score=36.26 Aligned_cols=31 Identities=26% Similarity=0.425 Sum_probs=27.8
Q ss_pred EEEeecccccccchhhHHHHHHHHHHHHccC
Q 042198 130 LVICACISHTFGDGTSFSSFMKAWAATARNK 160 (437)
Q Consensus 130 ~~L~~~~~H~v~Dg~~~~~fl~~wa~~~rg~ 160 (437)
+-|+++++|.+.||.-...|++.+.+.....
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~P 240 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVEKI 240 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHhCh
Confidence 4599999999999999999999999988643
No 22
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=60.28 E-value=5.9 Score=35.87 Aligned_cols=30 Identities=17% Similarity=0.327 Sum_probs=27.4
Q ss_pred EEEeecccccccchhhHHHHHHHHHHHHcc
Q 042198 130 LVICACISHTFGDGTSFSSFMKAWAATARN 159 (437)
Q Consensus 130 ~~L~~~~~H~v~Dg~~~~~fl~~wa~~~rg 159 (437)
+-|+++++|.+.||.-...|++.+.+....
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 234 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIES 234 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHhC
Confidence 468999999999999999999999998864
No 23
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=48.84 E-value=35 Score=22.84 Aligned_cols=42 Identities=19% Similarity=0.320 Sum_probs=30.8
Q ss_pred CCeEEEEEEecHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHhhhc
Q 042198 205 GRFVTRRFVFDAEAIAELKDKAKSSRVQNPTRIEALSAILSRSIMAVLN 253 (437)
Q Consensus 205 ~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~St~dal~A~lW~~~~~ar~ 253 (437)
.+.....|+||+|+-+.|.+.|.++ .|.+..++=|.|.++..
T Consensus 13 k~~~~Vs~Y~SkEey~~L~klA~eE-------~eSV~sfIKR~IlK~l~ 54 (66)
T 2k1o_A 13 KRNFSVTFYLSKEEHDVLRRLADEE-------VESVNSFVKRHILKTII 54 (66)
T ss_dssp CCCEEEEEEEEHHHHHHHHHHHHTT-------CSCHHHHHHHHHHHHHC
T ss_pred ccceEEEEEecHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHH
Confidence 4456789999999999999999875 23355666666666543
No 24
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=45.39 E-value=22 Score=22.96 Aligned_cols=22 Identities=18% Similarity=0.246 Sum_probs=19.2
Q ss_pred EEEEEEecHHHHHHHHHHhhcC
Q 042198 208 VTRRFVFDAEAIAELKDKAKSS 229 (437)
Q Consensus 208 ~~~~f~fs~~~l~~Lk~~a~~~ 229 (437)
....|+||+++-+.|++.|.++
T Consensus 2 ~~Vs~Y~SkEey~~L~klA~eE 23 (55)
T 1x93_A 2 RAVSLYFSDEQYQKLEKMANEE 23 (55)
T ss_dssp EEEEEEECHHHHHHHHHHHHHT
T ss_pred ceEEEEecHHHHHHHHHHHHHH
Confidence 3568999999999999999875
No 25
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=41.65 E-value=5.5 Score=39.16 Aligned_cols=30 Identities=13% Similarity=0.212 Sum_probs=0.0
Q ss_pred EEEeecccccccchhhHHHHHHHHHHHHcc
Q 042198 130 LVICACISHTFGDGTSFSSFMKAWAATARN 159 (437)
Q Consensus 130 ~~L~~~~~H~v~Dg~~~~~fl~~wa~~~rg 159 (437)
+-|++++||.+.||.-...|++.+.+.+..
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le~ 420 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLLSD 420 (428)
T ss_dssp ------------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHHhC
Confidence 359999999999999999999999987653
No 26
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=38.77 E-value=19 Score=19.22 Aligned_cols=17 Identities=35% Similarity=0.204 Sum_probs=14.3
Q ss_pred CCHHHHHHHHHHHHHHh
Q 042198 234 PTRIEALSAILSRSIMA 250 (437)
Q Consensus 234 ~St~dal~A~lW~~~~~ 250 (437)
.++.|-|+-++|+++..
T Consensus 8 ftsqdylsdhlwralna 24 (26)
T 2xl1_A 8 FTSQDYLSDHLWRALNA 24 (26)
T ss_pred eecHHHHHHHHHHHHhc
Confidence 56789999999998863
Done!