BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 042199
         (220 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|2AA6|A Chain A, Mineralocorticoid Receptor S810l Mutant With Bound
           Progesterone
 pdb|2AA6|B Chain B, Mineralocorticoid Receptor S810l Mutant With Bound
           Progesterone
 pdb|2AAX|A Chain A, Mineralocorticoid Receptor Double Mutant With Bound
           Cortisone
 pdb|2AAX|B Chain B, Mineralocorticoid Receptor Double Mutant With Bound
           Cortisone
 pdb|2AB2|A Chain A, Mineralocorticoid Receptor Double Mutant With Bound
           Spironolactone
 pdb|2AB2|B Chain B, Mineralocorticoid Receptor Double Mutant With Bound
           Spironolactone
          Length = 275

 Score = 30.8 bits (68), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 34/73 (46%)

Query: 13  SFINFISSFLSANSFRLNFVLVAPDFIFNCGGMSISFVFITNWDCHNTAVVFSRIKKLKE 72
           S ++F  S+ S       F+  APD +FN   M  S ++      H  ++ F R++   E
Sbjct: 99  SLLSFALSWRSYKHTNSQFLYFAPDLVFNEEKMHQSAMYELCQGMHQISLQFVRLQLTFE 158

Query: 73  QFAHFYVVLALPT 85
           ++    V+L L T
Sbjct: 159 EYTIMKVLLLLST 171


>pdb|3VHU|A Chain A, Mineralocorticoid Receptor Ligand-Binding Domain With
           Spironolactone
          Length = 294

 Score = 30.8 bits (68), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 34/73 (46%)

Query: 13  SFINFISSFLSANSFRLNFVLVAPDFIFNCGGMSISFVFITNWDCHNTAVVFSRIKKLKE 72
           S ++F  S+ S       F+  APD +FN   M  S ++      H  ++ F R++   E
Sbjct: 118 SLLSFALSWRSYKHTNSQFLYFAPDLVFNEEKMHQSAMYELCQGMHQISLQFVRLQLTFE 177

Query: 73  QFAHFYVVLALPT 85
           ++    V+L L T
Sbjct: 178 EYTIMKVLLLLST 190


>pdb|3VHV|A Chain A, Mineralocorticoid Receptor Ligand-Binding Domain With
           Non-Steroidal Antagonist
          Length = 260

 Score = 30.8 bits (68), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 34/73 (46%)

Query: 13  SFINFISSFLSANSFRLNFVLVAPDFIFNCGGMSISFVFITNWDCHNTAVVFSRIKKLKE 72
           S ++F  S+ S       F+  APD +FN   M  S ++      H  ++ F R++   E
Sbjct: 84  SLLSFALSWRSYKHTNSQFLYFAPDLVFNEEKMHQSAMYELCQGMHQISLQFVRLQLTFE 143

Query: 73  QFAHFYVVLALPT 85
           ++    V+L L T
Sbjct: 144 EYTIMKVLLLLST 156


>pdb|3MW9|A Chain A, Bovine Glutamate Dehydrogenase Complexed With Nadh, Gtp,
           Glu
 pdb|3MW9|B Chain B, Bovine Glutamate Dehydrogenase Complexed With Nadh, Gtp,
           Glu
 pdb|3MW9|C Chain C, Bovine Glutamate Dehydrogenase Complexed With Nadh, Gtp,
           Glu
 pdb|3MW9|D Chain D, Bovine Glutamate Dehydrogenase Complexed With Nadh, Gtp,
           Glu
 pdb|3MW9|E Chain E, Bovine Glutamate Dehydrogenase Complexed With Nadh, Gtp,
           Glu
 pdb|3MW9|F Chain F, Bovine Glutamate Dehydrogenase Complexed With Nadh, Gtp,
           Glu
 pdb|3MVO|A Chain A, Crystal Structure Of Bovine Glutamate Dehydrogenase
           Complexed With Eu3+
 pdb|3MVO|B Chain B, Crystal Structure Of Bovine Glutamate Dehydrogenase
           Complexed With Eu3+
 pdb|3MVO|C Chain C, Crystal Structure Of Bovine Glutamate Dehydrogenase
           Complexed With Eu3+
 pdb|3MVO|D Chain D, Crystal Structure Of Bovine Glutamate Dehydrogenase
           Complexed With Eu3+
 pdb|3MVO|E Chain E, Crystal Structure Of Bovine Glutamate Dehydrogenase
           Complexed With Eu3+
 pdb|3MVO|F Chain F, Crystal Structure Of Bovine Glutamate Dehydrogenase
           Complexed With Eu3+
 pdb|3MVQ|A Chain A, Bovine Glutamate Dehydrogenase Complexed With Zinc
 pdb|3MVQ|B Chain B, Bovine Glutamate Dehydrogenase Complexed With Zinc
 pdb|3MVQ|C Chain C, Bovine Glutamate Dehydrogenase Complexed With Zinc
 pdb|3MVQ|D Chain D, Bovine Glutamate Dehydrogenase Complexed With Zinc
 pdb|3MVQ|E Chain E, Bovine Glutamate Dehydrogenase Complexed With Zinc
 pdb|3MVQ|F Chain F, Bovine Glutamate Dehydrogenase Complexed With Zinc
 pdb|3QMU|A Chain A, Bovine Glutamate Dehydrogenase Complexed With
           Epicatechin-3-Gallate (Ecg)
 pdb|3QMU|B Chain B, Bovine Glutamate Dehydrogenase Complexed With
           Epicatechin-3-Gallate (Ecg)
 pdb|3QMU|C Chain C, Bovine Glutamate Dehydrogenase Complexed With
           Epicatechin-3-Gallate (Ecg)
 pdb|3QMU|D Chain D, Bovine Glutamate Dehydrogenase Complexed With
           Epicatechin-3-Gallate (Ecg)
 pdb|3QMU|E Chain E, Bovine Glutamate Dehydrogenase Complexed With
           Epicatechin-3-Gallate (Ecg)
 pdb|3QMU|F Chain F, Bovine Glutamate Dehydrogenase Complexed With
           Epicatechin-3-Gallate (Ecg)
 pdb|3QMU|G Chain G, Bovine Glutamate Dehydrogenase Complexed With
           Epicatechin-3-Gallate (Ecg)
 pdb|3QMU|H Chain H, Bovine Glutamate Dehydrogenase Complexed With
           Epicatechin-3-Gallate (Ecg)
 pdb|3QMU|I Chain I, Bovine Glutamate Dehydrogenase Complexed With
           Epicatechin-3-Gallate (Ecg)
 pdb|3QMU|J Chain J, Bovine Glutamate Dehydrogenase Complexed With
           Epicatechin-3-Gallate (Ecg)
 pdb|3QMU|K Chain K, Bovine Glutamate Dehydrogenase Complexed With
           Epicatechin-3-Gallate (Ecg)
 pdb|3QMU|L Chain L, Bovine Glutamate Dehydrogenase Complexed With
           Epicatechin-3-Gallate (Ecg)
          Length = 501

 Score = 30.4 bits (67), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 14/89 (15%)

Query: 32  VLVAPDFIFNCGGMSISFVFITNWDCHNTAVVFSRIKKLKEQFAHFYVVLALPTREQNDS 91
           ++V PD   N GG+++S+     W  +   V + R+    E+ +++++++++      +S
Sbjct: 365 IMVIPDLYLNAGGVTVSYF---EWLNNLNHVSYGRLTFKYERDSNYHLLMSV-----QES 416

Query: 92  FVRSYFKYGMELGRPTFVPV---QDREMG 117
             R + K+G   G    VP    QDR  G
Sbjct: 417 LERKFGKHG---GTIPIVPTAEFQDRISG 442


>pdb|1L1F|A Chain A, Structure Of Human Glutamate Dehydrogenase-Apo Form
 pdb|1L1F|B Chain B, Structure Of Human Glutamate Dehydrogenase-Apo Form
 pdb|1L1F|C Chain C, Structure Of Human Glutamate Dehydrogenase-Apo Form
 pdb|1L1F|D Chain D, Structure Of Human Glutamate Dehydrogenase-Apo Form
 pdb|1L1F|E Chain E, Structure Of Human Glutamate Dehydrogenase-Apo Form
 pdb|1L1F|F Chain F, Structure Of Human Glutamate Dehydrogenase-Apo Form
          Length = 505

 Score = 30.4 bits (67), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 14/89 (15%)

Query: 32  VLVAPDFIFNCGGMSISFVFITNWDCHNTAVVFSRIKKLKEQFAHFYVVLALPTREQNDS 91
           ++V PD   N GG+++S+     W  +   V + R+    E+ +++++++++      +S
Sbjct: 369 IMVIPDLYLNAGGVTVSYF---EWLKNLNHVSYGRLTFKYERDSNYHLLMSV-----QES 420

Query: 92  FVRSYFKYGMELGRPTFVPV---QDREMG 117
             R + K+G   G    VP    QDR  G
Sbjct: 421 LERKFGKHG---GTIPIVPTAEFQDRISG 446


>pdb|3ETD|A Chain A, Structure Of Glutamate Dehydrogenase Complexed With
           Bithionol
 pdb|3ETD|B Chain B, Structure Of Glutamate Dehydrogenase Complexed With
           Bithionol
 pdb|3ETD|C Chain C, Structure Of Glutamate Dehydrogenase Complexed With
           Bithionol
 pdb|3ETD|D Chain D, Structure Of Glutamate Dehydrogenase Complexed With
           Bithionol
 pdb|3ETD|E Chain E, Structure Of Glutamate Dehydrogenase Complexed With
           Bithionol
 pdb|3ETD|F Chain F, Structure Of Glutamate Dehydrogenase Complexed With
           Bithionol
 pdb|3ETE|A Chain A, Crystal Structure Of Bovine Glutamate Dehydrogenase
           Complexed With Hexachlorophene
 pdb|3ETE|B Chain B, Crystal Structure Of Bovine Glutamate Dehydrogenase
           Complexed With Hexachlorophene
 pdb|3ETE|C Chain C, Crystal Structure Of Bovine Glutamate Dehydrogenase
           Complexed With Hexachlorophene
 pdb|3ETE|D Chain D, Crystal Structure Of Bovine Glutamate Dehydrogenase
           Complexed With Hexachlorophene
 pdb|3ETE|E Chain E, Crystal Structure Of Bovine Glutamate Dehydrogenase
           Complexed With Hexachlorophene
 pdb|3ETE|F Chain F, Crystal Structure Of Bovine Glutamate Dehydrogenase
           Complexed With Hexachlorophene
 pdb|3ETG|A Chain A, Glutamate Dehydrogenase Complexed With Gw5074
 pdb|3ETG|B Chain B, Glutamate Dehydrogenase Complexed With Gw5074
 pdb|3ETG|C Chain C, Glutamate Dehydrogenase Complexed With Gw5074
 pdb|3ETG|D Chain D, Glutamate Dehydrogenase Complexed With Gw5074
 pdb|3ETG|E Chain E, Glutamate Dehydrogenase Complexed With Gw5074
 pdb|3ETG|F Chain F, Glutamate Dehydrogenase Complexed With Gw5074
          Length = 501

 Score = 30.4 bits (67), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 14/89 (15%)

Query: 32  VLVAPDFIFNCGGMSISFVFITNWDCHNTAVVFSRIKKLKEQFAHFYVVLALPTREQNDS 91
           ++V PD   N GG+++S+     W  +   V + R+    E+ +++++++++      +S
Sbjct: 365 IMVIPDLYLNAGGVTVSYF---EWLKNLNHVSYGRLTFKYERDSNYHLLMSV-----QES 416

Query: 92  FVRSYFKYGMELGRPTFVPV---QDREMG 117
             R + K+G   G    VP    QDR  G
Sbjct: 417 LERKFGKHG---GTIPIVPTAEFQDRISG 442


>pdb|1NQT|A Chain A, Crystal Structure Of Bovine Glutamate Dehydrogenase-adp
           Complex
 pdb|1NQT|B Chain B, Crystal Structure Of Bovine Glutamate Dehydrogenase-adp
           Complex
 pdb|1NQT|C Chain C, Crystal Structure Of Bovine Glutamate Dehydrogenase-adp
           Complex
 pdb|1NQT|D Chain D, Crystal Structure Of Bovine Glutamate Dehydrogenase-adp
           Complex
 pdb|1NQT|E Chain E, Crystal Structure Of Bovine Glutamate Dehydrogenase-adp
           Complex
 pdb|1NQT|F Chain F, Crystal Structure Of Bovine Glutamate Dehydrogenase-adp
           Complex
 pdb|1NQT|G Chain G, Crystal Structure Of Bovine Glutamate Dehydrogenase-adp
           Complex
 pdb|1NQT|H Chain H, Crystal Structure Of Bovine Glutamate Dehydrogenase-adp
           Complex
 pdb|1NQT|I Chain I, Crystal Structure Of Bovine Glutamate Dehydrogenase-adp
           Complex
 pdb|1NQT|J Chain J, Crystal Structure Of Bovine Glutamate Dehydrogenase-adp
           Complex
 pdb|1NQT|K Chain K, Crystal Structure Of Bovine Glutamate Dehydrogenase-adp
           Complex
 pdb|1NQT|L Chain L, Crystal Structure Of Bovine Glutamate Dehydrogenase-adp
           Complex
 pdb|1NR7|A Chain A, Crystal Structure Of Apo Bovine Glutamate Dehydrogenase
 pdb|1NR7|B Chain B, Crystal Structure Of Apo Bovine Glutamate Dehydrogenase
 pdb|1NR7|C Chain C, Crystal Structure Of Apo Bovine Glutamate Dehydrogenase
 pdb|1NR7|D Chain D, Crystal Structure Of Apo Bovine Glutamate Dehydrogenase
 pdb|1NR7|E Chain E, Crystal Structure Of Apo Bovine Glutamate Dehydrogenase
 pdb|1NR7|F Chain F, Crystal Structure Of Apo Bovine Glutamate Dehydrogenase
 pdb|1NR7|G Chain G, Crystal Structure Of Apo Bovine Glutamate Dehydrogenase
 pdb|1NR7|H Chain H, Crystal Structure Of Apo Bovine Glutamate Dehydrogenase
 pdb|1NR7|I Chain I, Crystal Structure Of Apo Bovine Glutamate Dehydrogenase
 pdb|1NR7|J Chain J, Crystal Structure Of Apo Bovine Glutamate Dehydrogenase
 pdb|1NR7|K Chain K, Crystal Structure Of Apo Bovine Glutamate Dehydrogenase
 pdb|1NR7|L Chain L, Crystal Structure Of Apo Bovine Glutamate Dehydrogenase
          Length = 496

 Score = 30.0 bits (66), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 14/89 (15%)

Query: 32  VLVAPDFIFNCGGMSISFVFITNWDCHNTAVVFSRIKKLKEQFAHFYVVLALPTREQNDS 91
           ++V PD   N GG+++S+     W  +   V + R+    E+ +++++++++      +S
Sbjct: 360 IMVIPDLYLNAGGVTVSYF---EWLKNLNHVSYGRLTFKYERDSNYHLLMSV-----QES 411

Query: 92  FVRSYFKYGMELGRPTFVPV---QDREMG 117
             R + K+G   G    VP    QDR  G
Sbjct: 412 LERKFGKHG---GTIPIVPTAEFQDRISG 437


>pdb|1NR1|A Chain A, Crystal Structure Of The R463a Mutant Of Human Glutamate
           Dehydrogenase
 pdb|1NR1|B Chain B, Crystal Structure Of The R463a Mutant Of Human Glutamate
           Dehydrogenase
 pdb|1NR1|C Chain C, Crystal Structure Of The R463a Mutant Of Human Glutamate
           Dehydrogenase
 pdb|1NR1|D Chain D, Crystal Structure Of The R463a Mutant Of Human Glutamate
           Dehydrogenase
 pdb|1NR1|E Chain E, Crystal Structure Of The R463a Mutant Of Human Glutamate
           Dehydrogenase
 pdb|1NR1|F Chain F, Crystal Structure Of The R463a Mutant Of Human Glutamate
           Dehydrogenase
          Length = 496

 Score = 30.0 bits (66), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 14/89 (15%)

Query: 32  VLVAPDFIFNCGGMSISFVFITNWDCHNTAVVFSRIKKLKEQFAHFYVVLALPTREQNDS 91
           ++V PD   N GG+++S+     W  +   V + R+    E+ +++++++++      +S
Sbjct: 360 IMVIPDLYLNAGGVTVSYF---EWLKNLNHVSYGRLTFKYERDSNYHLLMSV-----QES 411

Query: 92  FVRSYFKYGMELGRPTFVPV---QDREMG 117
             R + K+G   G    VP    QDR  G
Sbjct: 412 LERKFGKHG---GTIPIVPTAEFQDRISG 437


>pdb|1Y9R|A Chain A, Crystal Structure Of The Human Mineralocorticoid Receptor
           Ligand-Binding Domain Bound To Deoxycorticosterone And
           Harboring The S810l Mutation Responsible For A Severe
           Form Of Hypertension
 pdb|1Y9R|B Chain B, Crystal Structure Of The Human Mineralocorticoid Receptor
           Ligand-Binding Domain Bound To Deoxycorticosterone And
           Harboring The S810l Mutation Responsible For A Severe
           Form Of Hypertension
 pdb|1YA3|A Chain A, Crystal Structure Of The Human Mineralocorticoid Receptor
           Ligand-Binding Domain Bound To Progesterone And
           Harboring The S810l Mutation Responsible For A Severe
           Form Of Hypertension
 pdb|1YA3|B Chain B, Crystal Structure Of The Human Mineralocorticoid Receptor
           Ligand-Binding Domain Bound To Progesterone And
           Harboring The S810l Mutation Responsible For A Severe
           Form Of Hypertension
 pdb|1YA3|C Chain C, Crystal Structure Of The Human Mineralocorticoid Receptor
           Ligand-Binding Domain Bound To Progesterone And
           Harboring The S810l Mutation Responsible For A Severe
           Form Of Hypertension
          Length = 255

 Score = 29.6 bits (65), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 3/76 (3%)

Query: 13  SFINFISSFLSANSFR---LNFVLVAPDFIFNCGGMSISFVFITNWDCHNTAVVFSRIKK 69
           S++  +S  LS  S++     F+  APD +FN   M  S ++      H  ++ F R++ 
Sbjct: 76  SWMCLLSFALSWRSYKHTNSQFLYFAPDLVFNEEKMHQSAMYELCQGMHQISLQFVRLQL 135

Query: 70  LKEQFAHFYVVLALPT 85
             E++    V+L L T
Sbjct: 136 TFEEYTIMKVLLLLST 151


>pdb|1HWY|A Chain A, Bovine Glutamate Dehydrogenase Complexed With Nad And
           2-Oxoglutarate
 pdb|1HWY|B Chain B, Bovine Glutamate Dehydrogenase Complexed With Nad And
           2-Oxoglutarate
 pdb|1HWY|C Chain C, Bovine Glutamate Dehydrogenase Complexed With Nad And
           2-Oxoglutarate
 pdb|1HWY|D Chain D, Bovine Glutamate Dehydrogenase Complexed With Nad And
           2-Oxoglutarate
 pdb|1HWY|E Chain E, Bovine Glutamate Dehydrogenase Complexed With Nad And
           2-Oxoglutarate
 pdb|1HWY|F Chain F, Bovine Glutamate Dehydrogenase Complexed With Nad And
           2-Oxoglutarate
 pdb|1HWZ|A Chain A, Bovine Glutamate Dehydrogenase Complexed With Nadph,
           Glutamate, And Gtp
 pdb|1HWZ|B Chain B, Bovine Glutamate Dehydrogenase Complexed With Nadph,
           Glutamate, And Gtp
 pdb|1HWZ|C Chain C, Bovine Glutamate Dehydrogenase Complexed With Nadph,
           Glutamate, And Gtp
 pdb|1HWZ|D Chain D, Bovine Glutamate Dehydrogenase Complexed With Nadph,
           Glutamate, And Gtp
 pdb|1HWZ|E Chain E, Bovine Glutamate Dehydrogenase Complexed With Nadph,
           Glutamate, And Gtp
 pdb|1HWZ|F Chain F, Bovine Glutamate Dehydrogenase Complexed With Nadph,
           Glutamate, And Gtp
          Length = 501

 Score = 29.6 bits (65), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 14/89 (15%)

Query: 32  VLVAPDFIFNCGGMSISFVFITNWDCHNTAVVFSRIKKLKEQFAHFYVVLALPTREQNDS 91
           ++V PD   N GG+++S+  I     H   V + R+    E+ +++++++++      +S
Sbjct: 365 IMVIPDLYLNAGGVTVSYFQILKNLNH---VSYGRLTFKYERDSNYHLLMSV-----QES 416

Query: 92  FVRSYFKYGMELGRPTFVPV---QDREMG 117
             R + K+G   G    VP    QDR  G
Sbjct: 417 LERKFGKHG---GTIPIVPTAEFQDRISG 442


>pdb|2OAX|A Chain A, Crystal Structure Of The S810l Mutant Mineralocorticoid
           Receptor Associated With Sc9420
 pdb|2OAX|B Chain B, Crystal Structure Of The S810l Mutant Mineralocorticoid
           Receptor Associated With Sc9420
 pdb|2OAX|C Chain C, Crystal Structure Of The S810l Mutant Mineralocorticoid
           Receptor Associated With Sc9420
 pdb|2OAX|D Chain D, Crystal Structure Of The S810l Mutant Mineralocorticoid
           Receptor Associated With Sc9420
 pdb|2OAX|E Chain E, Crystal Structure Of The S810l Mutant Mineralocorticoid
           Receptor Associated With Sc9420
 pdb|2OAX|F Chain F, Crystal Structure Of The S810l Mutant Mineralocorticoid
           Receptor Associated With Sc9420
          Length = 256

 Score = 29.6 bits (65), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 3/76 (3%)

Query: 13  SFINFISSFLSANSFR---LNFVLVAPDFIFNCGGMSISFVFITNWDCHNTAVVFSRIKK 69
           S++  +S  LS  S++     F+  APD +FN   M  S ++      H  ++ F R++ 
Sbjct: 77  SWMCLLSFALSWRSYKHTNSQFLYFAPDLVFNEEKMHQSAMYELCQGMHQISLQFVRLQL 136

Query: 70  LKEQFAHFYVVLALPT 85
             E++    V+L L T
Sbjct: 137 TFEEYTIMKVLLLLST 152


>pdb|2A3I|A Chain A, Structural And Biochemical Mechanisms For The Specificity
           Of Hormone Binding And Coactivator Assembly By
           Mineralocorticoid Receptor
          Length = 253

 Score = 29.6 bits (65), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 10/76 (13%)

Query: 20  SFLSANSFRLN----------FVLVAPDFIFNCGGMSISFVFITNWDCHNTAVVFSRIKK 69
           S++S +SF L+          F+  APD +FN   M  S ++      H  ++ F R++ 
Sbjct: 74  SWMSLSSFALSWRSYKHTNSQFLYFAPDLVFNEEKMHQSAMYELCQGMHQISLQFVRLQL 133

Query: 70  LKEQFAHFYVVLALPT 85
             E++    V+L L T
Sbjct: 134 TFEEYTIMKVLLLLST 149


>pdb|2AA2|A Chain A, Mineralocorticoid Receptor With Bound Aldosterone
 pdb|2AA5|A Chain A, Mineralocorticoid Receptor With Bound Progesterone
 pdb|2AA5|B Chain B, Mineralocorticoid Receptor With Bound Progesterone
 pdb|2AA7|A Chain A, Mineralocorticoid Receptor With Bound Deoxycorticosterone
          Length = 275

 Score = 29.6 bits (65), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 10/76 (13%)

Query: 20  SFLSANSFRLN----------FVLVAPDFIFNCGGMSISFVFITNWDCHNTAVVFSRIKK 69
           S++S +SF L+          F+  APD +FN   M  S ++      H  ++ F R++ 
Sbjct: 96  SWMSLSSFALSWRSYKHTNSQFLYFAPDLVFNEEKMHQSAMYELCQGMHQISLQFVRLQL 155

Query: 70  LKEQFAHFYVVLALPT 85
             E++    V+L L T
Sbjct: 156 TFEEYTIMKVLLLLST 171


>pdb|2ABI|A Chain A, Crystal Structure Of The Human Mineralocorticoid Receptor
           Ligand-Binding Domain Bound To Deoxycorticosterone
 pdb|2ABI|B Chain B, Crystal Structure Of The Human Mineralocorticoid Receptor
           Ligand-Binding Domain Bound To Deoxycorticosterone
 pdb|2ABI|C Chain C, Crystal Structure Of The Human Mineralocorticoid Receptor
           Ligand-Binding Domain Bound To Deoxycorticosterone
          Length = 256

 Score = 29.3 bits (64), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 4/72 (5%)

Query: 18  ISSF-LSANSFR---LNFVLVAPDFIFNCGGMSISFVFITNWDCHNTAVVFSRIKKLKEQ 73
           +SSF LS  S++     F+  APD +FN   M  S ++      H  ++ F R++   E+
Sbjct: 81  LSSFALSWRSYKHTNSQFLYFAPDLVFNEEKMHQSAMYELCQGMHQISLQFVRLQLTFEE 140

Query: 74  FAHFYVVLALPT 85
           +    V+L L T
Sbjct: 141 YTIMKVLLLLST 152


>pdb|1BVU|A Chain A, Glutamate Dehydrogenase From Thermococcus Litoralis
 pdb|1BVU|B Chain B, Glutamate Dehydrogenase From Thermococcus Litoralis
 pdb|1BVU|C Chain C, Glutamate Dehydrogenase From Thermococcus Litoralis
 pdb|1BVU|D Chain D, Glutamate Dehydrogenase From Thermococcus Litoralis
 pdb|1BVU|E Chain E, Glutamate Dehydrogenase From Thermococcus Litoralis
 pdb|1BVU|F Chain F, Glutamate Dehydrogenase From Thermococcus Litoralis
          Length = 418

 Score = 28.9 bits (63), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 8/53 (15%)

Query: 32  VLVAPDFIFNCGGMSIS-FVFITN-----WDCHNTAVVFSRIKKLKEQFAHFY 78
           +L+ PDF+ N GG+++S F ++ N     W    T       KK+ + F   Y
Sbjct: 334 ILIIPDFLCNAGGVTVSYFEWVQNITGDYWTVEETRAKLD--KKMTKAFWDVY 384


>pdb|2H1Y|A Chain A, Crystal Structure Of Malonyl-Coa:acyl Carrier Protein
           Transacylase (Mcat) From Helicobacter Pylori
 pdb|2H1Y|B Chain B, Crystal Structure Of Malonyl-Coa:acyl Carrier Protein
           Transacylase (Mcat) From Helicobacter Pylori
          Length = 321

 Score = 28.9 bits (63), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 7/64 (10%)

Query: 78  YVVLALPTREQNDSFVRSYFKYGMELGRPTFVPVQDREMGFEKIIKIAHSRG-----VCK 132
           Y+   L  ++ N   ++  F  G  LG  + V +    + FEK +K+ H RG      C 
Sbjct: 81  YIAYQLLNKQANGG-LKPVFALGHSLGEVSAVSLSGA-LDFEKALKLTHQRGKMMQEACA 138

Query: 133 RQDA 136
            +DA
Sbjct: 139 NKDA 142


>pdb|3RY9|A Chain A, Crystal Structure Of The Resurrected Ancestral
           Glucocorticoid Receptor 1 In Complex With Doc
 pdb|3RY9|B Chain B, Crystal Structure Of The Resurrected Ancestral
           Glucocorticoid Receptor 1 In Complex With Doc
          Length = 250

 Score = 28.5 bits (62), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 11/84 (13%)

Query: 30  NFVLVAPDFIFNCGGMSISFVFITNWDCHNTAVVFSRIKKLKEQFAHFYVVLALPTREQN 89
           N +  APD IFN   M  S ++      H  ++ F R++   E++    V+L L T  ++
Sbjct: 91  NMLYFAPDLIFNEERMQQSSMYELCKGMHKISLEFVRLQVSYEEYLCMKVLLLLSTVPKD 150

Query: 90  --------DSFVRSYFKYGMELGR 105
                   D    SY K   ELG+
Sbjct: 151 GLKSQAAFDEIRMSYIK---ELGK 171


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.325    0.137    0.402 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,642,376
Number of Sequences: 62578
Number of extensions: 197899
Number of successful extensions: 675
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 662
Number of HSP's gapped (non-prelim): 20
length of query: 220
length of database: 14,973,337
effective HSP length: 95
effective length of query: 125
effective length of database: 9,028,427
effective search space: 1128553375
effective search space used: 1128553375
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 49 (23.5 bits)