BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042200
(181 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase
pdb|2BGK|B Chain B, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase
pdb|2BGL|A Chain A, X-Ray Structure Of Binary-Secoisolariciresinol
Dehydrogenase
pdb|2BGM|A Chain A, X-Ray Structure Of Ternary-Secoisolariciresinol
Dehydrogenase
Length = 278
Score = 151 bits (381), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 123/201 (61%), Gaps = 20/201 (9%)
Query: 1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
+F+++ AKV+IAD+ DD + +C S ++IS+V C+VT D DV+N+ D T K GKLD
Sbjct: 35 LFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD 94
Query: 59 IMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF-----------------LGVLLFTANL 101
IMF N G++S + L+ NE KRVM + V+ G ++FTA++
Sbjct: 95 IMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASI 154
Query: 102 ATETIGEAL-YDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKK 160
++ T GE + + Y +K+AVLGL +LC ELG+Y IRVN ++ + A+P + G+D
Sbjct: 155 SSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSS 214
Query: 161 TFKELLYASANLKGVVLKAAD 181
+EL + +ANLKG +L+A D
Sbjct: 215 RVEELAHQAANLKGTLLRAED 235
>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|E Chain E, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|F Chain F, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|G Chain G, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|I Chain I, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
Length = 280
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Query: 53 KFGKLDIMFNNAGIISNMD----------RTTLDTD------NEKVKRVMIMVVFLGVLL 96
+FG LD FNNAG + M R TLDT+ K + I + G L
Sbjct: 82 RFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLT 141
Query: 97 FTANLATETIG-EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF-FCNA 154
FT++ T G + Y SK ++GL++ L VELG IRVN++ + TP F N
Sbjct: 142 FTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANL 201
Query: 155 MGIDKKT--FKELLYA 168
G +T F E L+A
Sbjct: 202 PGAAPETRGFVEGLHA 217
>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|B Chain B, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|C Chain C, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|D Chain D, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
Length = 253
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 25/165 (15%)
Query: 8 KVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK--FGKLDIMFNNAG 65
+V++ADV D+ A +E + Y +VTI+ D + V + + FG +D + NNAG
Sbjct: 31 RVVLADVLDEEGAATARELG--DAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAG 88
Query: 66 IISNMDRTTLDTDN----EKVKRVMIMVVFLGVLLFTANL-------------ATETIGE 108
I + M L+T++ KV + + VF+G+ + A +G
Sbjct: 89 ISTGM---FLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL 145
Query: 109 AL-YDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFC 152
AL Y SK+ V GL K VELG IRVNS+ ++ TP
Sbjct: 146 ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTA 190
>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|B Chain B, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|C Chain C, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|D Chain D, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
Length = 254
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 25/165 (15%)
Query: 8 KVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK--FGKLDIMFNNAG 65
+V++ADV D+ A +E + Y +VTI+ D + V + + FG +D + NNAG
Sbjct: 31 RVVLADVLDEEGAATARELG--DAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAG 88
Query: 66 IISNMDRTTLDTDN----EKVKRVMIMVVFLGVLLFTANL-------------ATETIGE 108
I + M L+T++ KV + + VF+G+ + A +G
Sbjct: 89 ISTGM---FLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL 145
Query: 109 AL-YDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFC 152
AL Y SK+ V GL K VELG IRVNS+ ++ TP
Sbjct: 146 ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTA 190
>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase
pdb|1IY8|B Chain B, Crystal Structure Of Levodione Reductase
pdb|1IY8|C Chain C, Crystal Structure Of Levodione Reductase
pdb|1IY8|D Chain D, Crystal Structure Of Levodione Reductase
pdb|1IY8|E Chain E, Crystal Structure Of Levodione Reductase
pdb|1IY8|F Chain F, Crystal Structure Of Levodione Reductase
pdb|1IY8|G Chain G, Crystal Structure Of Levodione Reductase
pdb|1IY8|H Chain H, Crystal Structure Of Levodione Reductase
Length = 267
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 23/171 (13%)
Query: 7 AKVIIADVQDD---LCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMF 61
AK+ + DV + +A E D + +V+ ++ V+ T +FG++D F
Sbjct: 38 AKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFF 97
Query: 62 NNAGIISNMDRTTLDTDNE--KVKRVMIMVVFLGV--------------LLFTANLAT-E 104
NNAGI + T T E KV + + VFLG+ ++ TA++
Sbjct: 98 NNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR 157
Query: 105 TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAM 155
IG Y +K+ V+GL +N VE G+Y IR+N+IA TP N+M
Sbjct: 158 GIGN-QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSM 207
>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From
Mycobacterium Tuberculosis
pdb|1NFF|B Chain B, Crystal Structure Of Rv2002 Gene Product From
Mycobacterium Tuberculosis
pdb|1NFQ|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|B Chain B, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|C Chain C, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|D Chain D, Rv2002 Gene Product From Mycobacterium Tuberculosis
Length = 260
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 21/167 (12%)
Query: 2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFD--FTKFGKLDI 59
+ AKV+ D+ D+ +A+ E YV +VT + K D T FG L +
Sbjct: 27 MVAEGAKVVFGDILDEEGKAMAAELAD--AARYVHLDVTQPAQWKAAVDTAVTAFGGLHV 84
Query: 60 MFNNAGI--ISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIGE--------- 108
+ NNAGI I ++ L T+ +++ V + VFLG+ + G
Sbjct: 85 LVNNAGILNIGTIEDYAL-TEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEG 143
Query: 109 -----ALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF 150
A + Y +K+AV GL K+ +ELG IRVNSI + TP
Sbjct: 144 LAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPM 190
>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFR|B Chain B, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFR|C Chain C, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFR|D Chain D, Rv2002 Gene Product From Mycobacterium Tuberculosis
Length = 260
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 21/165 (12%)
Query: 3 IQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFD--FTKFGKLDIM 60
+ AKV+ D+ D+ +A E YV +VT + K D T FG L ++
Sbjct: 28 VAEGAKVVFGDILDEEGKAXAAELAD--AARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL 85
Query: 61 FNNAGI--ISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIGE---------- 108
NNAGI I ++ L T+ +++ V + VFLG+ G
Sbjct: 86 VNNAGILNIGTIEDYAL-TEWQRILDVNLTGVFLGIRAVVKPXKEAGRGSIINISSIEGL 144
Query: 109 ----ALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
A + Y +K+AV GL K+ +ELG IRVNSI + TP
Sbjct: 145 AGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTP 189
>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|B Chain B, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|C Chain C, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|D Chain D, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|E Chain E, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|F Chain F, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|G Chain G, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|H Chain H, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|I Chain I, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|J Chain J, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|K Chain K, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|L Chain L, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|M Chain M, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|N Chain N, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|O Chain O, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|P Chain P, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
Length = 270
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 24/170 (14%)
Query: 1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
F+ A+V+I D + RAL +E ++ C+VT + DVK + T +FG+LD
Sbjct: 28 AFVNSGARVVICDKDESGGRALEQELPG---AVFILCDVTQEDDVKTLVSETIRRFGRLD 84
Query: 59 IMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTA--------------NLAT- 103
+ NNAG R + + + R ++ + LG T N+++
Sbjct: 85 CVVNNAGHHPPPQRP--EETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSL 142
Query: 104 -ETIGEA-LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF 151
IG+A Y+ +K AV + K L ++ Y +RVN I+ TP +
Sbjct: 143 VGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLW 192
>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
pdb|3UVE|B Chain B, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
pdb|3UVE|C Chain C, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
pdb|3UVE|D Chain D, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
Length = 286
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 32/149 (21%)
Query: 34 YVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLG 93
Y +DS V+ + G+LDI+ NAGI + D TLD +E+ MI + G
Sbjct: 88 YDALKAAVDSGVE------QLGRLDIIVANAGIGNGGD--TLDKTSEEDWTEMIDINLAG 139
Query: 94 V-------------------LLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQY 134
V ++ T+++ Y+ +K+ V+GLM+ VELGQ+
Sbjct: 140 VWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQH 199
Query: 135 DIRVNSIAHIVSATPFFCNAMGIDKKTFK 163
IRVNS+ TP N + TFK
Sbjct: 200 MIRVNSVHPTHVKTPMLHN-----EGTFK 223
>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nad
pdb|3T7C|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nad
pdb|3T7C|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nad
pdb|3T7C|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nad
Length = 299
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 23/122 (18%)
Query: 52 TKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLA--------- 102
T+ G+LDI+ NA + S + T L+ + K R MI V G + TA +A
Sbjct: 113 TQLGRLDIVLANAALAS--EGTRLNRMDPKTWRDMIDVNLNGAWI-TARVAIPHIMAGKR 169
Query: 103 ------TETIG-----EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF 151
T +IG E + +Y+ SK+ + GLM+ + +ELG +IRVN + ATP
Sbjct: 170 GGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPML 229
Query: 152 CN 153
N
Sbjct: 230 LN 231
>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of
Caenorhabditis Elegans In The Apo-Form
Length = 278
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 26/198 (13%)
Query: 1 VFIQHRAKVII----ADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KF 54
+F + AKV I A+ ++ + + S++ ++ V +VT D+ + T KF
Sbjct: 25 LFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 84
Query: 55 GKLDIMFNNAG--IISNMDRTTLDTDNEKVK-------RVMIMVVFLGVLLFTANLAT-- 103
GKLDI+ NNAG I + +T E R +I + V ++
Sbjct: 85 GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIV 144
Query: 104 --ETIGEALYD------YLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAM 155
+I L+ Y ++K A+ +N ++L Q+ IRVNSI+ + AT F +AM
Sbjct: 145 NISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVAT-GFGSAM 203
Query: 156 GIDKKTFKELLYASANLK 173
G+ ++T K+ A +K
Sbjct: 204 GMPEETSKKFYSTMATMK 221
>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3R1I|B Chain B, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
Length = 276
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 24/128 (18%)
Query: 37 CNVTIDSDVKNVFD--FTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM---IMVVF 91
C+VT V+ + D + G +DI NAGI+S + LD E+ +R+ + VF
Sbjct: 88 CDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSV--QAMLDMPLEEFQRIQDTNVTGVF 145
Query: 92 L---------------GVLLFTANLATE--TIGEALYDYLMSKYAVLGLMKNLCVELGQY 134
L G ++ TA+++ I + + Y SK AV+ L K + VEL +
Sbjct: 146 LTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPH 205
Query: 135 DIRVNSIA 142
IRVNS++
Sbjct: 206 QIRVNSVS 213
>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nadh
pdb|1ZJZ|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nad
pdb|1ZK0|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nadh
pdb|1ZK1|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nad
pdb|1ZK2|A Chain A, Orthorhombic Crystal Structure Of The Apo-Form Of
R-Specific Alcohol Dehydrogenase (Mutant G37d) From
Lactobacillus Brevis
pdb|1ZK3|A Chain A, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|B Chain B, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|C Chain C, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|D Chain D, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|E Chain E, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|F Chain F, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|G Chain G, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|H Chain H, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
Length = 251
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 20/178 (11%)
Query: 2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK--FGKLDI 59
F++ AKV+I D D+ K + + I + + + + +FD T+ FG +
Sbjct: 26 FVEEGAKVMITDRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST 85
Query: 60 MFNNAGIISNMD-RTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIG----------- 107
+ NNAGI N T + K+ V + VF G L + + +G
Sbjct: 86 LVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEG 145
Query: 108 ----EALYDYLMSKYAVLGLMKNLCVE--LGQYDIRVNSIAHIVSATPFFCNAMGIDK 159
+L Y SK AV + K+ ++ L YD+RVN++ TP + G ++
Sbjct: 146 FVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEE 203
>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From
Rhizobium Etli Cfn 42
pdb|4DQX|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase From
Rhizobium Etli Cfn 42
pdb|4DQX|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase From
Rhizobium Etli Cfn 42
pdb|4DQX|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase From
Rhizobium Etli Cfn 42
Length = 277
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 79/170 (46%), Gaps = 21/170 (12%)
Query: 1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
+F ++ A V++ADV +D + E S V +V+ D ++ + T K+G++D
Sbjct: 46 LFAKNGAYVVVADVNEDAAVRVANEIGSKAF--GVRVDVSSAKDAESXVEKTTAKWGRVD 103
Query: 59 IMFNNAGIISNMDRTTLDTDN-EKVKRVMIMVVFL---------------GVLLFTANLA 102
++ NNAG + + T+ + +++ V + +FL ++ T+ A
Sbjct: 104 VLVNNAGFGTTGNVVTIPEETWDRIXSVNVKGIFLCSKYVIPVXRRNGGGSIINTTSYTA 163
Query: 103 TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFC 152
T I + Y+ SK A+ L + + + IRVN++A +P+F
Sbjct: 164 TSAIADRTA-YVASKGAISSLTRAXAXDHAKEGIRVNAVAPGTIDSPYFT 212
>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
pdb|3N74|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
pdb|3N74|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
pdb|3N74|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
Length = 261
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 72/185 (38%), Gaps = 24/185 (12%)
Query: 2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMF 61
F + AKV+I D + E L + D D +KFGK+DI+
Sbjct: 29 FAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDILV 88
Query: 62 NNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTA-------------------NLA 102
NNAGI L + E+ R+ + V GV L T+ N+A
Sbjct: 89 NNAGIGHKPQNAEL-VEPEEFDRI-VGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVA 146
Query: 103 TETIGEA---LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDK 159
+ G L Y +K V+ + K L +EL IRV ++ + TP MG D
Sbjct: 147 STGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDS 206
Query: 160 KTFKE 164
+ ++
Sbjct: 207 EEIRK 211
>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh
And 7-Oxo Glycochenodeoxycholic Acid
pdb|1AHI|B Chain B, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh
And 7-Oxo Glycochenodeoxycholic Acid
pdb|1AHH|A Chain A, 7 Alpha-hydroxysteroid Dehydrogenase Complexed With Nad+
pdb|1AHH|B Chain B, 7 Alpha-hydroxysteroid Dehydrogenase Complexed With Nad+
pdb|1FMC|A Chain A, 7-Alpha-Hydroxysteroid Dehydrogenase Complex With Nadh And
7-Oxo Glycochenodeoxycholic Acid
pdb|1FMC|B Chain B, 7-Alpha-Hydroxysteroid Dehydrogenase Complex With Nadh And
7-Oxo Glycochenodeoxycholic Acid
Length = 255
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 23/161 (14%)
Query: 2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVC-CNVTIDSDVKNVFDF--TKFGKLD 58
F A V+++D+ D + E ++ C C++T + ++ + DF +K GK+D
Sbjct: 31 FATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVD 90
Query: 59 IMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFL-----------------GVLLFTANL 101
I+ NNAG D +R + VF GV+L ++
Sbjct: 91 ILVNNAG---GGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSM 147
Query: 102 ATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
A E + Y SK A L++N+ +LG+ +IRVN IA
Sbjct: 148 AAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIA 188
>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase
Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QIV|B Chain B, Crystal Structure Of A Putative Short-Chain Dehydrogenase
Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
Length = 253
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 22/160 (13%)
Query: 4 QHRAKVIIADVQDDLCRALCKEF--DSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
+ A V++AD+ + A+ K+ D IS V +V+ K + D T +FG +D
Sbjct: 31 REGAAVVVADINAEAAEAVAKQIVADGGTAIS-VAVDVSDPESAKAMADRTLAEFGGIDY 89
Query: 60 MFNNAGIISNMDRTTLDT-DNEKVKRVMIMVVFLGVLLFTANL---ATETIGEALYD--- 112
+ NNA I M L T D E K+ M V G L T + T+ G A+ +
Sbjct: 90 LVNNAAIFGGMKLDFLLTIDPEYYKKFM-SVNLDGALWCTRAVYKKMTKRGGGAIVNQSS 148
Query: 113 ---------YLMSKYAVLGLMKNLCVELGQYDIRVNSIAH 143
Y ++K + GL + L ELG +IR+N+IA
Sbjct: 149 TAAWLYSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAP 188
>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase
Family Protein From Francisella Tularensis Subsp.
Tularensis Schu S4
Length = 244
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 17/129 (13%)
Query: 28 SDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMI 87
S E + ++ ++T D+ NV D K D +F NAGI+ + + D D E +K+V+
Sbjct: 42 SAENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNAGIL--IKGSIFDIDIESIKKVLD 99
Query: 88 MVVFLGVLLFTANLATETIGEAL---------------YDYLMSKYAVLGLMKNLCVELG 132
+ V+ + +G ++ + Y +SK A+ K+L ++L
Sbjct: 100 LNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQXTKSLALDLA 159
Query: 133 QYDIRVNSI 141
+Y IRVN++
Sbjct: 160 KYQIRVNTV 168
>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
pdb|1RWB|B Chain B, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
pdb|1RWB|E Chain E, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
pdb|1RWB|F Chain F, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
Length = 261
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 2 FIQHRAKVIIA-DVQDDLCRALCKEFD--SDELISYVCCNVTIDSDVKNVFD--FTKFGK 56
F +AKV++ ++D ++ +E E I+ V +VT++SDV N+ +FGK
Sbjct: 27 FATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA-VKGDVTVESDVINLVQSAIKEFGK 85
Query: 57 LDIMFNNAGIISNMDRTTLD-TDNEKVKRVMIMVVFLG----VLLFTAN----------L 101
LD+M NNAG+ + + + +D KV + FLG + F N
Sbjct: 86 LDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSS 145
Query: 102 ATETIGEALY-DYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
E I L+ Y SK + + K L +E IRVN+I TP
Sbjct: 146 VHEKIPWPLFVHYAASKGGMKLMTKTLALEYAPKGIRVNNIGPGAINTP 194
>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|B Chain B, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|C Chain C, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|D Chain D, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|E Chain E, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|F Chain F, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|G Chain G, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|H Chain H, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
Length = 245
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 20/158 (12%)
Query: 1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIM 60
+F + A+++ D+++ R + + ++ V +++ G+LD +
Sbjct: 24 LFAKEGARLVACDIEEGPLREAAEAVGAHPVVXDVADPASVERGFAEAL--AHLGRLDGV 81
Query: 61 FNNAGIIS-NMDRTTLDTDNEKVKRVMIMVVFL--------------GVLLFTAN-LATE 104
+ AGI N D E V RV + FL G ++ TA+ +
Sbjct: 82 VHYAGITRDNFHWKXPLEDWELVLRVNLTGSFLVAKAASEAXREKNPGSIVLTASRVYLG 141
Query: 105 TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
+G+A +Y S V+GL + L +ELG++ IRVN++A
Sbjct: 142 NLGQA--NYAASXAGVVGLTRTLALELGRWGIRVNTLA 177
>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh)
(Apoenyzme) From Lactobacillus Brevis
pdb|1ZK4|A Chain A, Structure Of R-specific Alcohol Dehydrogenase (wildtype)
From Lactobacillus Brevis In Complex With Acetophenone
And Nadp
Length = 251
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 74/178 (41%), Gaps = 20/178 (11%)
Query: 2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK--FGKLDI 59
F++ AKV+I D+ K + + I + + + + +FD T+ FG +
Sbjct: 26 FVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST 85
Query: 60 MFNNAGIISNMD-RTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIG----------- 107
+ NNAGI N T + K+ V + VF G L + + +G
Sbjct: 86 LVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEG 145
Query: 108 ----EALYDYLMSKYAVLGLMKNLCVE--LGQYDIRVNSIAHIVSATPFFCNAMGIDK 159
+L Y SK AV + K+ ++ L YD+RVN++ TP + G ++
Sbjct: 146 FVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEE 203
>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066750
pdb|2WD8|A Chain A, Pteridine Reductase 1 (ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00071204
pdb|2WD8|B Chain B, Pteridine Reductase 1 (ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00071204
pdb|2WD8|C Chain C, Pteridine Reductase 1 (ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00071204
pdb|2WD8|D Chain D, Pteridine Reductase 1 (ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00071204
pdb|2VZ0|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066641
pdb|2VZ0|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066641
pdb|2VZ0|C Chain C, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066641
pdb|2VZ0|D Chain D, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066641
Length = 268
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 34/141 (24%)
Query: 51 FTKFGKLDIMFNNAGII-----------SNMDRTTLDTDNEKVKRVMIMVVFLGVLLF-- 97
F FG+ D++ NNA N + T++T ++ + FL + F
Sbjct: 81 FRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQ 140
Query: 98 ----------TANLATETIGEALYD--------YLMSKYAVLGLMKNLCVELGQYDIRVN 139
++NL+ + +A+ D Y M K+A++GL ++ +EL Y IRVN
Sbjct: 141 RQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVN 200
Query: 140 SIAHIVSATPFFCNAMGIDKK 160
+A VS P AMG ++K
Sbjct: 201 GVAPGVSLLPV---AMGEEEK 218
>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
pdb|1G6K|B Chain B, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
pdb|1G6K|E Chain E, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
pdb|1G6K|F Chain F, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
Length = 261
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 2 FIQHRAKVIIA-DVQDDLCRALCKEFD--SDELISYVCCNVTIDSDVKNVFD--FTKFGK 56
F +AKV++ ++D ++ +E E I+ V +VT++SDV N+ +FGK
Sbjct: 27 FATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA-VKGDVTVESDVINLVQSAIKEFGK 85
Query: 57 LDIMFNNAGIISNMDRTTLD-TDNEKVKRVMIMVVFLG----VLLFTAN----------L 101
LD+M NNAG+ + + + +D KV + FLG + F N
Sbjct: 86 LDVMINNAGLANPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSS 145
Query: 102 ATETIGEALY-DYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
E I L+ Y SK + + + L +E IRVN+I TP
Sbjct: 146 VHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTP 194
>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066750
pdb|2WD7|C Chain C, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066750
pdb|2WD7|D Chain D, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066750
Length = 268
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 34/141 (24%)
Query: 51 FTKFGKLDIMFNNAGII-----------SNMDRTTLDTDNEKVKRVMIMVVFLGVLLF-- 97
F FG+ D++ NNA N + T++T ++ + FL + F
Sbjct: 81 FRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQ 140
Query: 98 ----------TANLATETIGEALYD--------YLMSKYAVLGLMKNLCVELGQYDIRVN 139
++NL+ + +A+ D Y M K+A++GL ++ +EL Y IRVN
Sbjct: 141 RQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVN 200
Query: 140 SIAHIVSATPFFCNAMGIDKK 160
+A VS P AMG ++K
Sbjct: 201 GVAPGVSLLPV---AMGEEEK 218
>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Substrate (Folate)
pdb|3BMC|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Substrate (Folate)
pdb|3BMC|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Substrate (Folate)
pdb|3BMN|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax3)
pdb|3BMN|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax3)
pdb|3BMN|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax3)
pdb|3BMO|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax4)
pdb|3BMO|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax4)
pdb|3BMO|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax4)
pdb|3BMQ|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax5)
pdb|3BMQ|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax5)
pdb|3JQ6|A Chain A, Crystal Structure Of Pteridine Reductase 1 (ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(nadp+) And Inhibitor 6,7-
Bis(1-methylethyl)pteridine-2,4-diamine (dx1)
pdb|3JQ6|B Chain B, Crystal Structure Of Pteridine Reductase 1 (ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(nadp+) And Inhibitor 6,7-
Bis(1-methylethyl)pteridine-2,4-diamine (dx1)
pdb|3JQ6|C Chain C, Crystal Structure Of Pteridine Reductase 1 (ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(nadp+) And Inhibitor 6,7-
Bis(1-methylethyl)pteridine-2,4-diamine (dx1)
pdb|3JQ6|D Chain D, Crystal Structure Of Pteridine Reductase 1 (ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(nadp+) And Inhibitor 6,7-
Bis(1-methylethyl)pteridine-2,4-diamine (dx1)
pdb|3JQ8|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6,7,7-
Trimethyl-7,8-Dihydropteridine-2,4-Diamine (Dx3)
pdb|3JQ9|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-6-(1,3-Benzodioxol-5-Yl)-4-Oxo-4,7-
Dihydro-3h-Pyrrolo[2,3-D]pyrimidine-5-Carbonitrile (Ax1)
pdb|3JQ9|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-6-(1,3-Benzodioxol-5-Yl)-4-Oxo-4,7-
Dihydro-3h-Pyrrolo[2,3-D]pyrimidine-5-Carbonitrile (Ax1)
pdb|3JQA|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-1,9-Dihydro-6h-Purine-6-Thione (Dx4)
pdb|3JQB|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-5-(2-Phenylethyl)-3,7-Dihydro-4h-
Pyrrolo[2,3-D]pyrimidin-4-One (Dx6)
pdb|3JQB|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-5-(2-Phenylethyl)-3,7-Dihydro-4h-
Pyrrolo[2,3-D]pyrimidin-4-One (Dx6)
pdb|3JQB|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-5-(2-Phenylethyl)-3,7-Dihydro-4h-
Pyrrolo[2,3-D]pyrimidin-4-One (Dx6)
pdb|3JQC|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-Bromo-4-Oxo-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Ju2)
pdb|3JQC|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-Bromo-4-Oxo-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Ju2)
pdb|3JQC|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-Bromo-4-Oxo-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Ju2)
pdb|3JQC|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-Bromo-4-Oxo-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Ju2)
pdb|3JQE|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-(4-Methoxyphenyl)-4-Oxo-4,
7-Dihydro-3h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
(Dx8)
pdb|3JQE|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-(4-Methoxyphenyl)-4-Oxo-4,
7-Dihydro-3h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
(Dx8)
pdb|3JQE|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-(4-Methoxyphenyl)-4-Oxo-4,
7-Dihydro-3h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
(Dx8)
pdb|3JQE|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-(4-Methoxyphenyl)-4-Oxo-4,
7-Dihydro-3h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
(Dx8)
pdb|3JQF|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 1,3,5- Triazine-2,4,6-Triamine
(Ax2)
pdb|3JQF|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 1,3,5- Triazine-2,4,6-Triamine
(Ax2)
pdb|3JQF|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 1,3,5- Triazine-2,4,6-Triamine
(Ax2)
pdb|3JQG|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6-[(4-
Methoxybenzyl)sulfanyl]pyrimidine-2,4-Diamine (Ax6)
pdb|3JQG|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6-[(4-
Methoxybenzyl)sulfanyl]pyrimidine-2,4-Diamine (Ax6)
pdb|3GN2|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00066730)
pdb|3GN2|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00066730)
pdb|3GN2|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00066730)
pdb|3GN2|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00066730)
pdb|3MCV|A Chain A, Structure Of Ptr1 From Trypanosoma Brucei In Ternary
Complex With 2,4-
Diamino-5-[2-(2,5-Dimethoxyphenyl)ethyl]thieno[2,
3-D]-Pyrimidine And Nadp+
pdb|3MCV|B Chain B, Structure Of Ptr1 From Trypanosoma Brucei In Ternary
Complex With 2,4-
Diamino-5-[2-(2,5-Dimethoxyphenyl)ethyl]thieno[2,
3-D]-Pyrimidine And Nadp+
pdb|3MCV|C Chain C, Structure Of Ptr1 From Trypanosoma Brucei In Ternary
Complex With 2,4-
Diamino-5-[2-(2,5-Dimethoxyphenyl)ethyl]thieno[2,
3-D]-Pyrimidine And Nadp+
pdb|3MCV|D Chain D, Structure Of Ptr1 From Trypanosoma Brucei In Ternary
Complex With 2,4-
Diamino-5-[2-(2,5-Dimethoxyphenyl)ethyl]thieno[2,
3-D]-Pyrimidine And Nadp+
pdb|2X9G|A Chain A, High Resolution Structure Of Tbptr1 In Complex With
Pemetrexed
pdb|2X9G|B Chain B, High Resolution Structure Of Tbptr1 In Complex With
Pemetrexed
pdb|2X9G|C Chain C, High Resolution Structure Of Tbptr1 In Complex With
Pemetrexed
pdb|2X9G|D Chain D, High Resolution Structure Of Tbptr1 In Complex With
Pemetrexed
pdb|2X9V|A Chain A, High Resolution Structure Of Tbptr1 With Trimetrexate
pdb|2X9V|B Chain B, High Resolution Structure Of Tbptr1 With Trimetrexate
pdb|2X9V|C Chain C, High Resolution Structure Of Tbptr1 With Trimetrexate
pdb|2X9V|D Chain D, High Resolution Structure Of Tbptr1 With Trimetrexate
pdb|2X9N|A Chain A, High Resolution Structure Of Tbptr1 In Complex With
Cyromazine
pdb|2X9N|B Chain B, High Resolution Structure Of Tbptr1 In Complex With
Cyromazine
pdb|2X9N|C Chain C, High Resolution Structure Of Tbptr1 In Complex With
Cyromazine
pdb|2X9N|D Chain D, High Resolution Structure Of Tbptr1 In Complex With
Cyromazine
pdb|2YHI|B Chain B, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Wh16
pdb|2YHI|D Chain D, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Wh16
Length = 288
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 34/141 (24%)
Query: 51 FTKFGKLDIMFNNAGII-----------SNMDRTTLDTDNEKVKRVMIMVVFLGVLLF-- 97
F FG+ D++ NNA N + T++T ++ + FL + F
Sbjct: 101 FRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQ 160
Query: 98 ----------TANLATETIGEALYD--------YLMSKYAVLGLMKNLCVELGQYDIRVN 139
++NL+ + +A+ D Y M K+A++GL ++ +EL Y IRVN
Sbjct: 161 RQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVN 220
Query: 140 SIAHIVSATPFFCNAMGIDKK 160
+A VS P AMG ++K
Sbjct: 221 GVAPGVSLLPV---AMGEEEK 238
>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine
(Dx2)
pdb|3JQA|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-1,9-Dihydro-6h-Purine-6-Thione (Dx4)
pdb|3JQA|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-1,9-Dihydro-6h-Purine-6-Thione (Dx4)
pdb|3JQF|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 1,3,5- Triazine-2,4,6-Triamine
(Ax2)
pdb|3JQG|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6-[(4-
Methoxybenzyl)sulfanyl]pyrimidine-2,4-Diamine (Ax6)
pdb|3JQG|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6-[(4-
Methoxybenzyl)sulfanyl]pyrimidine-2,4-Diamine (Ax6)
pdb|2YHI|A Chain A, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Wh16
pdb|2YHI|C Chain C, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Wh16
Length = 288
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 34/141 (24%)
Query: 51 FTKFGKLDIMFNNAGII-----------SNMDRTTLDTDNEKVKRVMIMVVFLGVLLF-- 97
F FG+ D++ NNA N + T++T ++ + FL + F
Sbjct: 101 FRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQ 160
Query: 98 ----------TANLATETIGEALYD--------YLMSKYAVLGLMKNLCVELGQYDIRVN 139
++NL+ + +A+ D Y M K+A++GL ++ +EL Y IRVN
Sbjct: 161 RQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVN 220
Query: 140 SIAHIVSATPFFCNAMGIDKK 160
+A VS P AMG ++K
Sbjct: 221 GVAPGVSLLPV---AMGEEEK 238
>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Substrate (Folate)
pdb|3BMN|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax3)
pdb|3BMO|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax4)
pdb|3BMQ|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax5)
pdb|3BMQ|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax5)
pdb|3JQ8|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6,7,7-
Trimethyl-7,8-Dihydropteridine-2,4-Diamine (Dx3)
pdb|3JQ8|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6,7,7-
Trimethyl-7,8-Dihydropteridine-2,4-Diamine (Dx3)
pdb|3JQ8|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6,7,7-
Trimethyl-7,8-Dihydropteridine-2,4-Diamine (Dx3)
pdb|3JQ9|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-6-(1,3-Benzodioxol-5-Yl)-4-Oxo-4,7-
Dihydro-3h-Pyrrolo[2,3-D]pyrimidine-5-Carbonitrile (Ax1)
pdb|3JQ9|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-6-(1,3-Benzodioxol-5-Yl)-4-Oxo-4,7-
Dihydro-3h-Pyrrolo[2,3-D]pyrimidine-5-Carbonitrile (Ax1)
pdb|3JQB|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-5-(2-Phenylethyl)-3,7-Dihydro-4h-
Pyrrolo[2,3-D]pyrimidin-4-One (Dx6)
pdb|3JQD|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-4-Oxo-6-Phenyl-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Dx7)
pdb|3JQD|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-4-Oxo-6-Phenyl-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Dx7)
pdb|3JQD|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-4-Oxo-6-Phenyl-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Dx7)
pdb|3JQD|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-4-Oxo-6-Phenyl-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Dx7)
pdb|3GN1|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00067116)
pdb|3GN1|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00067116)
pdb|3GN1|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00067116)
pdb|3GN1|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00067116)
pdb|2YHU|A Chain A, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Whf30
pdb|2YHU|B Chain B, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Whf30
pdb|2YHU|C Chain C, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Whf30
pdb|2YHU|D Chain D, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Whf30
Length = 288
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 34/141 (24%)
Query: 51 FTKFGKLDIMFNNAGII-----------SNMDRTTLDTDNEKVKRVMIMVVFLGVLLF-- 97
F FG+ D++ NNA N + T++T ++ + FL + F
Sbjct: 101 FRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQ 160
Query: 98 ----------TANLATETIGEALYD--------YLMSKYAVLGLMKNLCVELGQYDIRVN 139
++NL+ + +A+ D Y M K+A++GL ++ +EL Y IRVN
Sbjct: 161 RQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGLTQSAALELAPYGIRVN 220
Query: 140 SIAHIVSATPFFCNAMGIDKK 160
+A VS P AMG ++K
Sbjct: 221 GVAPGVSLLPV---AMGEEEK 238
>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1)
In Ternary Complex With Cofactor And The Antifolate
Methotrexate
pdb|2C7V|B Chain B, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1)
In Ternary Complex With Cofactor And The Antifolate
Methotrexate
pdb|2C7V|C Chain C, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1)
In Ternary Complex With Cofactor And The Antifolate
Methotrexate
pdb|2C7V|D Chain D, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1)
In Ternary Complex With Cofactor And The Antifolate
Methotrexate
Length = 268
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 34/141 (24%)
Query: 51 FTKFGKLDIMFNNAGII-----------SNMDRTTLDTDNEKVKRVMIMVVFLGVLLF-- 97
F FG+ D++ NNA N + T++T ++ + FL + F
Sbjct: 81 FRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQ 140
Query: 98 ----------TANLATETIGEALYD--------YLMSKYAVLGLMKNLCVELGQYDIRVN 139
++NL+ + +A+ D Y M K+A++GL ++ +EL Y IRVN
Sbjct: 141 RQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGLTQSAALELAPYGIRVN 200
Query: 140 SIAHIVSATPFFCNAMGIDKK 160
+A VS P AMG ++K
Sbjct: 201 GVAPGVSLLPV---AMGEEEK 218
>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
Length = 264
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 21/126 (16%)
Query: 35 VCCNVTIDSDVKNVFDFT--KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFL 92
V ++T D+ V ++ D T +G++D++ NNA + +M + +T E ++ + + VF
Sbjct: 65 VGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSM-KPFANTTFEHMRDAIELTVFG 123
Query: 93 GVLL---FTANLATETIG-------------EALYD-YLMSKYAVLGLMKNLCVELGQYD 135
+ L FT L E+ G +A Y Y M+K A+L + + L ELG+
Sbjct: 124 ALRLIQGFTPAL-EESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKG 182
Query: 136 IRVNSI 141
IRVNS+
Sbjct: 183 IRVNSV 188
>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine
(Dx2)
pdb|3JQ7|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine
(Dx2)
pdb|3JQ7|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine
(Dx2)
pdb|3JQA|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-1,9-Dihydro-6h-Purine-6-Thione (Dx4)
Length = 288
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 34/141 (24%)
Query: 51 FTKFGKLDIMFNNAGII-----------SNMDRTTLDTDNEKVKRVMIMVVFLGVLLF-- 97
F FG+ D++ NNA N + T++T ++ + FL + F
Sbjct: 101 FRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQ 160
Query: 98 ----------TANLATETIGEALYD--------YLMSKYAVLGLMKNLCVELGQYDIRVN 139
++NL+ + +A+ D Y M K+A++GL ++ +EL Y IRVN
Sbjct: 161 RQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGLTQSAALELAPYGIRVN 220
Query: 140 SIAHIVSATPFFCNAMGIDKK 160
+A VS P AMG ++K
Sbjct: 221 GVAPGVSLLPV---AMGEEEK 238
>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
pdb|1GCO|B Chain B, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
pdb|1GCO|E Chain E, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
pdb|1GCO|F Chain F, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
Length = 261
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 2 FIQHRAKVIIA-DVQDDLCRALCKEFD--SDELISYVCCNVTIDSDVKNVFD--FTKFGK 56
F +AKV++ ++D ++ +E E I+ V +VT++SDV N+ +FGK
Sbjct: 27 FATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA-VKGDVTVESDVINLVQSAIKEFGK 85
Query: 57 LDIMFNNAGIISNMDRTTLD-TDNEKVKRVMIMVVFLG----VLLFTAN----------L 101
LD+M NNAG+ + + + +D KV + FLG + F N
Sbjct: 86 LDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSS 145
Query: 102 ATETIGEALY-DYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
E I L+ Y SK + + + L +E IRVN+I TP
Sbjct: 146 VHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTP 194
>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
pdb|1GEE|B Chain B, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
pdb|1GEE|E Chain E, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
pdb|1GEE|F Chain F, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
Length = 261
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 2 FIQHRAKVIIA-DVQDDLCRALCKEFD--SDELISYVCCNVTIDSDVKNVFD--FTKFGK 56
F +AKV++ ++D ++ +E E I+ V +VT++SDV N+ +FGK
Sbjct: 27 FATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA-VKGDVTVESDVINLVQSAIKEFGK 85
Query: 57 LDIMFNNAGIISNMDRTTLD-TDNEKVKRVMIMVVFLG----VLLFTAN----------L 101
LD+M NNAG+ + + + +D KV + FLG + F N
Sbjct: 86 LDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSS 145
Query: 102 ATETIGEALY-DYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
E I L+ Y SK + + + L +E IRVN+I TP
Sbjct: 146 VHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTP 194
>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|B Chain B, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|C Chain C, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|D Chain D, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
Length = 250
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 20/136 (14%)
Query: 35 VCCNVTIDSDVKNVFDFT--KFGKLDIMFNNAGIISNMDRTTLDTDN----EKVKRVMIM 88
V +V + DV T +FG +D++ NNAGI N + L T +KV V +
Sbjct: 57 VRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVR 116
Query: 89 VVFL--------------GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQY 134
+FL GV++ A++A+ Y SK AVL L K++ V+
Sbjct: 117 GIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGS 176
Query: 135 DIRVNSIAHIVSATPF 150
IR N++ + TP
Sbjct: 177 GIRCNAVCPGMIETPM 192
>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida
Tropicalis Peroxisomal Multifunctional Enzyme Type 2
Length = 604
Score = 42.7 bits (99), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 30/163 (18%)
Query: 2 FIQHRAKVIIADVQD-----DLCRALCKEFDSDELISYVCCNVTIDSD--VKNVFDFTKF 54
F ++ AKV++ D +D D +A E D+ +V DS+ +KNV D K+
Sbjct: 342 FAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQH------DVAKDSEAIIKNVID--KY 393
Query: 55 GKLDIMFNNAGIISNMDRTTLDTDN-EKVKRVMIMVVFLGVLLFTANLATETIGEAL--- 110
G +DI+ NNAGI+ + + + V++V ++ F L + G +
Sbjct: 394 GTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINIT 453
Query: 111 -----------YDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
+Y SK +LGL K + +E + +I+VN +A
Sbjct: 454 STSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVA 496
Score = 34.7 bits (78), Expect = 0.033, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 30/168 (17%)
Query: 2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTID-SDVKNVFDFTK------- 53
F + AKV++ D+ L +D ++ + N + +D NV D K
Sbjct: 28 FAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAVK 87
Query: 54 -FGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFT------------AN 100
FG + ++ NNAGI+ + ++ EK +++I V G T
Sbjct: 88 NFGTVHVIINNAGILRD---ASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGR 144
Query: 101 LATETIGEALY------DYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
+ + LY +Y +K A+LG + L E +Y+I+ N+IA
Sbjct: 145 IVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIA 192
>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
pdb|3O4R|B Chain B, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
pdb|3O4R|C Chain C, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
pdb|3O4R|D Chain D, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
Length = 261
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 30/130 (23%)
Query: 55 GKLDIMFNNAGI----ISNMDRT------TLDTDNEKVKRVMIMVVFL-------GVLLF 97
G +DI+ +NA + S MD T TLD N K +M V G ++
Sbjct: 91 GGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDI-NVKAPALMTKAVVPEMEKRGGGSVVI 149
Query: 98 TANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGI 157
+++A + Y +SK A+LGL K L +EL +IRVN C A G+
Sbjct: 150 VSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVN------------CLAPGL 197
Query: 158 DKKTFKELLY 167
K +F +L+
Sbjct: 198 IKTSFSRMLW 207
>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From
Caenorhabditis Elegans With Cofactor And Substrate
pdb|1XHL|B Chain B, Crystal Structure Of Putative Tropinone Reductase-Ii From
Caenorhabditis Elegans With Cofactor And Substrate
Length = 297
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 33/195 (16%)
Query: 1 VFIQHRAKVIIADVQDDLC----RALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KF 54
+F + A+V I +D + + K E I+ V +VT S ++ + T KF
Sbjct: 45 IFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 104
Query: 55 GKLDIMFNNAGIISNMDRTTLDTDN--------------------EKVKRVMIMVVFLGV 94
GK+DI+ NNAG +N+ T +TD +K K +I G
Sbjct: 105 GKIDILVNNAG--ANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT--KGE 160
Query: 95 LLFTANLATETIGEALYDYLM-SKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCN 153
++ +++ + Y Y +K A+ + ++L Q+ +RVNS++ AT F
Sbjct: 161 IVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFM-G 219
Query: 154 AMGIDKKTFKELLYA 168
AMG+ +T + LY+
Sbjct: 220 AMGL-PETASDKLYS 233
>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Strain 104
pdb|3UWR|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Strain 104
pdb|3UWR|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Strain 104
pdb|3UWR|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Strain 104
Length = 286
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 21/108 (19%)
Query: 53 KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGV------------------ 94
+ G+LDI+ NAG+ D L + V + MI + GV
Sbjct: 101 QLGRLDIIVANAGV--GTDGRKLHKIRDNVWQDMIDINLTGVWHTVKAGVPHVLSGGRGG 158
Query: 95 -LLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI 141
++ T+++ Y+ +K+ V+GLM+ VELG + IRVN++
Sbjct: 159 SIVLTSSVGGRKAYPNTGHYIAAKHGVIGLMRAFAVELGPHMIRVNAV 206
>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
Length = 317
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 25/134 (18%)
Query: 51 FTKFGKLDIMFNNAGIISNMDRTTLDTDNE-----------------KVKRVMIMVVFLG 93
+FG +DI+ +N GI SN TD + V MI G
Sbjct: 130 LAEFGHIDILVSNVGI-SNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGG 188
Query: 94 VLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCN 153
++F ++ Y SK+ V GLM +L E+G+++IRVNS+ P N
Sbjct: 189 SVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSV------NPGAVN 242
Query: 154 A-MGIDKKTFKELL 166
M +++K K L
Sbjct: 243 TEMALNEKLLKMFL 256
>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|B Chain B, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|C Chain C, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|D Chain D, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
Length = 280
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 18/116 (15%)
Query: 53 KFGKLDIMFNNAGIISNMDRTTLDTDNE-----------------KVKRVMIMVVFLGVL 95
+FG+LD++ NAG++S R TD + MI G +
Sbjct: 102 QFGRLDVVVANAGVLS-WGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSI 160
Query: 96 LFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF 151
+ ++ A Y SK+ + L L +ELG+Y IRVNSI TP
Sbjct: 161 VVVSSSAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMI 216
>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|B Chain B, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|C Chain C, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|D Chain D, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|E Chain E, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|F Chain F, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|G Chain G, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|H Chain H, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
Length = 262
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 21/133 (15%)
Query: 30 ELISYVCCNVTIDSDVKNVFD--FTKFGKLDIMFNNAGI---------ISNMDRTTLDTD 78
E SYVC +VT + V D FGK+D +FNNAG + D + T
Sbjct: 57 EARSYVC-DVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTI 115
Query: 79 N--------EKVKRVMIMVVFLGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVE 130
N + V R MI + G ++ TA++A + Y SK A++ L + ++
Sbjct: 116 NVTGAFHVLKAVSRQMITQNY-GRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALD 174
Query: 131 LGQYDIRVNSIAH 143
L Y+IRVN+I+
Sbjct: 175 LAPYNIRVNAISP 187
>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC6|B Chain B, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC6|C Chain C, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC6|D Chain D, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|A Chain A, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|B Chain B, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|C Chain C, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|D Chain D, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
Length = 277
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 71/165 (43%), Gaps = 27/165 (16%)
Query: 1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVF------DFTKF 54
+F++H +IA L R L C +++D +F
Sbjct: 46 IFMRHGCHTVIAS--RSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF 103
Query: 55 GKLDIMFN--------NAGIIS-NMDRTTLDTDNE---KVKRVMIMVVFL---GVLL-FT 98
G++DI+ N AG +S N +T +D D V RV+ F GV++ T
Sbjct: 104 GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNIT 163
Query: 99 ANLATETIGEALYDYLMS-KYAVLGLMKNLCVELGQYDIRVNSIA 142
A L G+AL + S K AV + ++L VE G +IRVNS+A
Sbjct: 164 ATLGNR--GQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLA 206
>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase
pdb|2ZAT|B Chain B, Crystal Structure Of A Mammalian Reductase
pdb|2ZAT|C Chain C, Crystal Structure Of A Mammalian Reductase
pdb|2ZAT|D Chain D, Crystal Structure Of A Mammalian Reductase
Length = 260
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 12/58 (20%)
Query: 110 LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLY 167
L Y +SK A+LGL KNL VEL +IRVN C A G+ K F ++L+
Sbjct: 161 LGPYNVSKTALLGLTKNLAVELAPRNIRVN------------CLAPGLIKTNFSQVLW 206
>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R.
Sphaeroides
pdb|1K2W|B Chain B, Crystal Structure Of Sorbitol Dehydrogenase From R.
Sphaeroides
Length = 256
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 30/168 (17%)
Query: 1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFD------FTKF 54
+++ A+V IAD+ + RA E I C + +D + D ++
Sbjct: 24 AYVREGARVAIADINLEAARATAAE------IGPAACAIALDVTDQASIDRCVAELLDRW 77
Query: 55 GKLDIMFNNAGI-----ISNMDRTTLDT-----------DNEKVKRVMIMVVFLGVLLFT 98
G +DI+ NNA + I + R + D + V R MI G ++
Sbjct: 78 GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINM 137
Query: 99 ANLATETIGEALYD-YLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIV 145
A+ A GEAL Y +K AV+ L ++ + L ++ I VN+IA V
Sbjct: 138 ASQAGRR-GEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGV 184
>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
pdb|3TSC|B Chain B, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
pdb|3TSC|C Chain C, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
pdb|3TSC|D Chain D, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
Length = 277
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 18/119 (15%)
Query: 54 FGKLDIMFNNAGIISN--------------MD---RTTLDTDNEKVKRVMIMVVFLGVLL 96
G+LDI+ NAG+ + MD T +T R+ I G ++
Sbjct: 99 LGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRI-IEGGRGGSII 157
Query: 97 FTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAM 155
++ A + + Y SK+AV GL + ELG++ IRVNS+ TP M
Sbjct: 158 LISSAAGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDM 216
>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 G259a Mutant
pdb|3AY7|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 G259a Mutant
Length = 269
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 72/169 (42%), Gaps = 22/169 (13%)
Query: 2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISY---VCCNVTIDSDVKNVFD--FTKFGK 56
F Q AKV+I + ++ AL + + +E V +VT + DV N+ +FG
Sbjct: 35 FGQEEAKVVI-NYYNNEEEALDAKKEVEEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFGT 93
Query: 57 LDIMFNNAGIISNMDRTTLDTDN-EKVKRVMIMVVFLG----VLLFTAN----------L 101
LD+M NNAG+ + + L DN KV + FLG + F N
Sbjct: 94 LDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSS 153
Query: 102 ATETIGEALY-DYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
E I L+ Y SK + + + L +E IRVN+I TP
Sbjct: 154 VHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTP 202
>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Ligand-Free Form
pdb|3AUS|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Ligand-Free Form
pdb|3AUT|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Complex With Nadh
pdb|3AUT|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Complex With Nadh
pdb|3AUU|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Complex With D-Glucose
pdb|3AUU|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Complex With D-Glucose
Length = 269
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 72/169 (42%), Gaps = 22/169 (13%)
Query: 2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISY---VCCNVTIDSDVKNVFD--FTKFGK 56
F Q AKV+I + ++ AL + + +E V +VT + DV N+ +FG
Sbjct: 35 FGQEEAKVVI-NYYNNEEEALDAKKEVEEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFGT 93
Query: 57 LDIMFNNAGIISNMDRTTLDTDN-EKVKRVMIMVVFLG----VLLFTAN----------L 101
LD+M NNAG+ + + L DN KV + FLG + F N
Sbjct: 94 LDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSS 153
Query: 102 ATETIGEALY-DYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
E I L+ Y SK + + + L +E IRVN+I TP
Sbjct: 154 VHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTP 202
>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|B Chain B, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|C Chain C, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|D Chain D, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|E Chain E, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|F Chain F, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|G Chain G, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|H Chain H, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
Length = 256
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 17/158 (10%)
Query: 2 FIQHRAKVIIADVQDDLCRALCKEF-DSDELISYVCCNVTIDSDVKNVFD--FTKFGKLD 58
F + A V++ D++ + A+ + + CNVT + + V +FGK+
Sbjct: 32 FAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKIT 91
Query: 59 IMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFL--------------GVLLFTANLATE 104
++ NNAG +D E ++ + +F G +L +++A E
Sbjct: 92 VLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGE 151
Query: 105 TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
+ Y SK AV L +N+ ++G IRVN+IA
Sbjct: 152 NTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIA 189
>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 A258f Mutant In Complex With Nadh And
D-Glucose
pdb|3AY6|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 A258f Mutant In Complex With Nadh And
D-Glucose
pdb|3AY6|C Chain C, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 A258f Mutant In Complex With Nadh And
D-Glucose
pdb|3AY6|D Chain D, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 A258f Mutant In Complex With Nadh And
D-Glucose
Length = 269
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 70/170 (41%), Gaps = 24/170 (14%)
Query: 2 FIQHRAKVIIADVQDDL----CRALCKEFDSDELISYVCCNVTIDSDVKNVFD--FTKFG 55
F Q AKV+I ++ + +E +I V +VT + DV N+ +FG
Sbjct: 35 FGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAII--VQGDVTKEEDVVNLVQTAIKEFG 92
Query: 56 KLDIMFNNAGIISNMDRTTLDTDN-EKVKRVMIMVVFLG----VLLFTAN---------- 100
LD+M NNAG+ + + L DN KV + FLG + F N
Sbjct: 93 TLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVINMS 152
Query: 101 LATETIGEALY-DYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
E I L+ Y SK + + + L +E IRVN+I TP
Sbjct: 153 SVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTP 202
>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM
SINORHIZOBIUM Meliloti 1021
Length = 271
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 26/157 (16%)
Query: 5 HRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNA 64
RA+ ++++++ RA+ D+ + + I+ ++ + G LDI+ N+A
Sbjct: 67 ERAQAVVSEIEQAGGRAVAIRADNRDAEA-------IEQAIRETVE--ALGGLDILVNSA 117
Query: 65 GII--SNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATE----TIGEALYD------ 112
GI + ++ TT+ D ++V V F+ + + +L TIG L +
Sbjct: 118 GIWHSAPLEETTV-ADFDEVXAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPG 176
Query: 113 ---YLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVS 146
Y SK A+ GL K L +LG I VN I H S
Sbjct: 177 ISLYSASKAALAGLTKGLARDLGPRGITVN-IVHPGS 212
>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|B Chain B, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|C Chain C, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|D Chain D, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DMM|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|B Chain B, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|C Chain C, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|D Chain D, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
Length = 269
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 19/125 (15%)
Query: 37 CNVTIDSDVKNVFD--FTKFGKLDIMFNNAGIISN--MDRTTLDTDNEKVKRVMIMVVFL 92
+V+ +S+V+ +F ++G+LD++ NNAGI + + R D D + V + + VFL
Sbjct: 85 ADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRD-DWQSVLDLNLGGVFL 143
Query: 93 --------------GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV 138
G ++ A++ E +Y +K V+GL K + EL I V
Sbjct: 144 CSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITV 203
Query: 139 NSIAH 143
N++A
Sbjct: 204 NAVAP 208
>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain
Dehydrogenase From Mycobacterium Paratuberculosis
pdb|3TJR|B Chain B, Crystal Structure Of A Rv0851c Ortholog Short Chain
Dehydrogenase From Mycobacterium Paratuberculosis
Length = 301
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 27/176 (15%)
Query: 2 FIQHRAKVIIADV-QDDLCRAL----CKEFDSDELISYVCCNVTIDSDVKNVFD--FTKF 54
F + A+++++DV Q L +A+ + FD+ V C+V ++ + D F
Sbjct: 51 FARRGARLVLSDVDQPALEQAVNGLRGQGFDA----HGVVCDVRHLDEMVRLADEAFRLL 106
Query: 55 GKLDIMFNNAGIISNMDRTTLDTDNEKV-------KRVMIMVVFLGVLL---------FT 98
G +D++F+NAGI+ ++ D+ + + + FL LL FT
Sbjct: 107 GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFT 166
Query: 99 ANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNA 154
A+ A L Y ++KY V+GL + L E+ I V+ + +V T N+
Sbjct: 167 ASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNS 222
>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|B Chain B, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|C Chain C, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|D Chain D, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|E Chain E, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|F Chain F, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|G Chain G, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|H Chain H, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
Length = 246
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 23/137 (16%)
Query: 29 DELISYVCCNVTIDSDVKNVFDFTK--------FGKLDIMFNNAGIISN-----MDRTTL 75
DE+ + + +DV N D T FG++DI+ NNAG+ + M
Sbjct: 47 DEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEW 106
Query: 76 DTD-NEKVKRVMI---------MVVFLGVLLFTANLATETIGEALYDYLMSKYAVLGLMK 125
DT N +K V + M G ++ A++ T +Y+ +K V+GL K
Sbjct: 107 DTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTK 166
Query: 126 NLCVELGQYDIRVNSIA 142
EL +I VN+IA
Sbjct: 167 TSAKELASRNITVNAIA 183
>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|B Chain B, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|C Chain C, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|D Chain D, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
Length = 280
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 87/191 (45%), Gaps = 28/191 (14%)
Query: 1 VFIQHRAKVII----ADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KF 54
+F Q A V I ++ ++ + + K S++ ++ V +VT + + + T +F
Sbjct: 25 LFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 84
Query: 55 GKLDIMFNNAGIISNMDRTTLDTDN-----------------EKVKRVMI-MVVFLGVLL 96
GK+D++ NNAG T TD E K+V +V G ++
Sbjct: 85 GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIV 144
Query: 97 FTANLATETIGEA--LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNA 154
+++ + LY Y ++K A+ ++ ++L ++ IRVNS++ + T F NA
Sbjct: 145 NVSSIVAGPQAQPDFLY-YAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVET-GFTNA 202
Query: 155 MGIDKKTFKEL 165
MG+ + ++
Sbjct: 203 MGMPDQASQKF 213
>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
pdb|3AK4|B Chain B, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
pdb|3AK4|C Chain C, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
pdb|3AK4|D Chain D, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
Length = 263
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 22/125 (17%)
Query: 35 VCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVK---RVMIMVVF 91
V ++D+ ++ D G D++ NAG+ S M R +D +E+ V VF
Sbjct: 67 VTKRASVDAAMQKAID--ALGGFDLLCANAGV-STM-RPAVDITDEEWDFNFDVNARGVF 122
Query: 92 L---------------GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDI 136
L GV++ TA+LA + L Y SK+AV G + L E+ +I
Sbjct: 123 LANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNI 182
Query: 137 RVNSI 141
RVN +
Sbjct: 183 RVNCV 187
>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery.
pdb|4B79|B Chain B, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery.
pdb|4AVY|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery.
pdb|4AVY|B Chain B, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery
Length = 242
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 48/114 (42%), Gaps = 16/114 (14%)
Query: 51 FTKFGKLDIMFNNAGIISNMDRTTLDTDN-EKVKRVMIMVVFLGVLLFTANLATE----- 104
F +LD++ NNAGI + DR D E+V R+ + L L LA
Sbjct: 73 FEALPRLDVLVNNAGI--SRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSIL 130
Query: 105 -------TIGEA-LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF 150
T G A Y SK A++ L ++L E IRVN+IA TP
Sbjct: 131 NIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPL 184
>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|A Chain A, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|D Chain D, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|C Chain C, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|F Chain F, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|E Chain E, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|H Chain H, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|G Chain G, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
Length = 271
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 25/170 (14%)
Query: 1 VFIQHRAKVIIADVQD-DLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKL 57
V + A+V++AD+ + DL A + +V ++T + V+ + DFT FG+L
Sbjct: 30 VLARAGARVVLADLPETDLAGAAASV--GRGAVHHVV-DLTNEVSVRALIDFTIDTFGRL 86
Query: 58 DIMFNNAGIISNMD----RTTLDTDNE----KVKRVMIMVVFLGVLLFTA------NLAT 103
DI+ NNA D + T+D ++ + M+M + L +A N+++
Sbjct: 87 DIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISS 146
Query: 104 ETIGEALYD----YLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
T A YD Y +K A+ L + + + G++ +R N+IA + TP
Sbjct: 147 AT-AHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTP 195
>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|B Chain B, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|C Chain C, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|D Chain D, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|E Chain E, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|F Chain F, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|G Chain G, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|H Chain H, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
Length = 266
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 51/126 (40%), Gaps = 20/126 (15%)
Query: 54 FGKLDIMFNNAGIISNMDRTTLDTDNE------------------KVKRVMIMVVFLGVL 95
FG LD++ NNAGI + + +DTD + V + M+ G +
Sbjct: 96 FGGLDVLVNNAGI--SHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAI 153
Query: 96 LFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAM 155
+ A+ A Y Y SK ++ K L ELG + IR NS+ V T
Sbjct: 154 ITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVW 213
Query: 156 GIDKKT 161
G + K+
Sbjct: 214 GDEAKS 219
>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2
(17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To
Nad+ At 1.2 A
pdb|2O23|B Chain B, The Structure Of Wild-Type Human Hadh2
(17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To
Nad+ At 1.2 A
Length = 265
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 77/183 (42%), Gaps = 35/183 (19%)
Query: 2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK--FGKLDI 59
+ A ++ D+ + A K+ ++ + + +VT + DV+ K FG++D+
Sbjct: 32 LVGQGASAVLLDLPNSGGEAQAKKLGNNCV--FAPADVTSEKDVQTALALAKGKFGRVDV 89
Query: 60 MFNNAGI-----ISNMDRTTLDT--DNEKVKRVMIMVVF--------------------L 92
N AGI N+ + T D ++V V +M F
Sbjct: 90 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQR 149
Query: 93 GVLLFTANLAT--ETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF 150
GV++ TA++A +G+A Y SK ++G+ + +L IRV +IA + TP
Sbjct: 150 GVIINTASVAAFEGQVGQAAYS--ASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPL 207
Query: 151 FCN 153
+
Sbjct: 208 LTS 210
>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441)
From Thermotoga Maritima At 2.07 A Resolution
pdb|1VL8|B Chain B, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441)
From Thermotoga Maritima At 2.07 A Resolution
Length = 267
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 53/127 (41%), Gaps = 24/127 (18%)
Query: 37 CNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGV 94
C+V+ +VK + + KFGKLD + N AGI D R +I V G
Sbjct: 78 CDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDE---FRQVIEVNLFGT 134
Query: 95 ---------LLFTA------NLATETIGEA----LYDYLMSKYAVLGLMKNLCVELGQYD 135
LL + N+ + T+ E + Y SK V L K L E G+Y
Sbjct: 135 YYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYG 194
Query: 136 IRVNSIA 142
IRVN IA
Sbjct: 195 IRVNVIA 201
>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR
pdb|1U7T|B Chain B, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR
pdb|1U7T|C Chain C, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR
pdb|1U7T|D Chain D, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR
Length = 261
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 77/183 (42%), Gaps = 35/183 (19%)
Query: 2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK--FGKLDI 59
+ A ++ D+ + A K+ ++ + + +VT + DV+ K FG++D+
Sbjct: 30 LVGQGASAVLLDLPNSGGEAQAKKLGNNCV--FAPADVTSEKDVQTALALAKGKFGRVDV 87
Query: 60 MFNNAGI-----ISNMDRTTLDT--DNEKVKRVMIMVVF--------------------L 92
N AGI N+ + T D ++V V +M F
Sbjct: 88 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQR 147
Query: 93 GVLLFTANLAT--ETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF 150
GV++ TA++A +G+A Y SK ++G+ + +L IRV +IA + TP
Sbjct: 148 GVIINTASVAAFEGQVGQAAYS--ASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPL 205
Query: 151 FCN 153
+
Sbjct: 206 LTS 208
>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As
3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh),
Endoplasmic Reticulum- Associated Amyloid Beta-peptide
Binding Protein (erab)]
Length = 261
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 77/183 (42%), Gaps = 35/183 (19%)
Query: 2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK--FGKLDI 59
+ A ++ D+ + A K+ ++ + + +VT + DV+ K FG++D+
Sbjct: 30 LVGQGASAVLLDLPNSGGEAQAKKLGNNCV--FAPADVTSEKDVQTALALAKGKFGRVDV 87
Query: 60 MFNNAGI-----ISNMDRTTLDT--DNEKVKRVMIMVVF--------------------L 92
N AGI N+ + T D ++V V +M F
Sbjct: 88 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQR 147
Query: 93 GVLLFTANLAT--ETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF 150
GV++ TA++A +G+A Y SK ++G+ + +L IRV +IA + TP
Sbjct: 148 GVIINTASVAAFEGQVGQAAYS--ASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPL 205
Query: 151 FCN 153
+
Sbjct: 206 LTS 208
>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From
Arabidopsis Thaliana Gene At1g07440
pdb|2Q45|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of
Putative Tropinone Reductase From Arabidopsis Thaliana
Gene At1g07440
Length = 266
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 19/113 (16%)
Query: 55 GKLDIMFNNAGIISNMDRTTLDTDNE-----------------KVKRVMIMVVFLGVLLF 97
GKLDI+ NN G I + + TLD E ++ ++ G ++F
Sbjct: 91 GKLDILINNLGAIRS--KPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIF 148
Query: 98 TANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF 150
+++A Y +K A+ L +NL E IR N++A V ATP
Sbjct: 149 MSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPL 201
>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|B Chain B, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|C Chain C, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|D Chain D, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EWM|A Chain A, Crystal Structure Of The (S)-Specific 1-Phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EWM|B Chain B, Crystal Structure Of The (S)-Specific 1-Phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
Length = 249
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 57/129 (44%), Gaps = 25/129 (19%)
Query: 35 VCCNVTIDSDVKNVFD--FTKFGKLDIMFNNAGIIS--NMDRTTLDTDNEKVKRVMIMVV 90
V C+V+ DV+ + FG+ DI+ NNAGI D T E+ K+ + V
Sbjct: 59 VKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTF----EQWKKTFEINV 114
Query: 91 FLGVLLFTA--------------NLATETIG---EALYDYLMSKYAVLGLMKNLCVELGQ 133
G L+ A NL + T EA Y+ +K A +G + L +LG+
Sbjct: 115 DSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGK 174
Query: 134 YDIRVNSIA 142
I VN+IA
Sbjct: 175 DGITVNAIA 183
>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp
pdb|1AE1|B Chain B, Tropinone Reductase-I Complex With Nadp
Length = 273
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 45 VKNVFDFTKFGKLDIMFNNAGIISNMD---------RTTLDTDNEKVKRVMIMVVFL--- 92
V +VFD GKL+I+ NNAG++ + + + T+ E + + L
Sbjct: 92 VAHVFD----GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKA 147
Query: 93 ---GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
G ++F +++A + ++ Y SK A+ + K+L E + +IRVNS+A V TP
Sbjct: 148 SQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTP 207
Query: 150 FFCNAMGIDKKTFKEL 165
A+ + +E+
Sbjct: 208 LVETAIKKNPHQKEEI 223
>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus
Thermophilus Tt0137
pdb|2A4K|B Chain B, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus
Thermophilus Tt0137
Length = 263
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 21/150 (14%)
Query: 36 CCNVTIDSDVKNVFD--FTKFGKLDIMFNNAGIISNMDRTTLDTDN-EKVKRVMIMVVFL 92
+V+ V+ VF +FG+L + + AG+ + L + EKV RV + FL
Sbjct: 58 VADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFL 117
Query: 93 ------------GVLLFTANLATETIGE-ALYDYLMSKYAVLGLMKNLCVELGQYDIRVN 139
G L+ T ++A +G L Y K V+GL + L +EL + +RVN
Sbjct: 118 VARKAGEVLEEGGSLVLTGSVAG--LGAFGLAHYAAGKLGVVGLARTLALELARKGVRVN 175
Query: 140 SIAHIVSATPFFCNAMGIDKKTFKELLYAS 169
+ + TP G+ +++ + AS
Sbjct: 176 VLLPGLIQTPMTA---GLPPWAWEQEVGAS 202
>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein
pdb|4FGS|B Chain B, Crystal Structure Of A Probable Dehydrogenase Protein
pdb|4FGS|C Chain C, Crystal Structure Of A Probable Dehydrogenase Protein
pdb|4FGS|D Chain D, Crystal Structure Of A Probable Dehydrogenase Protein
Length = 273
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 72/188 (38%), Gaps = 29/188 (15%)
Query: 2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKF------- 54
F+ A+V I + D+ A E V I +D N+ + +
Sbjct: 49 FVAEGARVFITGRRKDVLDAAIAEIGG--------GAVGIQADSANLAELDRLYEKVKAE 100
Query: 55 -GKLDIMFNNAGIISNMDRTTL------DTDNEKVKRVMIMVVFLGVLL-------FTAN 100
G++D++F NAG S + + DT + VK V+ V LL T +
Sbjct: 101 AGRIDVLFVNAGGGSXLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGS 160
Query: 101 LATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKK 160
A T A Y SK A+ +N ++L IR+N+++ + T G D
Sbjct: 161 TAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPV 220
Query: 161 TFKELLYA 168
+ LL A
Sbjct: 221 QQQGLLNA 228
>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From
Pseudomonas Sp. Lb400
Length = 277
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 24/162 (14%)
Query: 2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFD--FTKFGKLDI 59
F+ AKV + D + L E D + + + +V D K +FGK+D
Sbjct: 25 FVAEGAKVAVLDKSAERLAEL--ETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDT 82
Query: 60 MFNNAGI------ISNMDRTTLDTDNEKVKRVMI-------------MVVFLGVLLFTAN 100
+ NAGI + ++ +LD ++V + + +V G ++FT +
Sbjct: 83 LIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTIS 142
Query: 101 LATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
A Y +K+A++GL++ L EL Y +RVN +
Sbjct: 143 NAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPY-VRVNGVG 183
>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
pdb|1GZ6|B Chain B, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
pdb|1GZ6|C Chain C, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
pdb|1GZ6|D Chain D, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
Length = 319
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 21/115 (18%)
Query: 45 VKNVFDFTKFGKLDIMFNNAGIISNMDRTTL-DTDNEKVKRVMIMVVF------------ 91
VK D FG++D++ NNAGI+ + + + D D + ++RV + F
Sbjct: 83 VKTALD--TFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHXKK 140
Query: 92 --LGVLLFTANLAT--ETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
G ++ TA+ + G+A +Y +K +LGL L +E + +I N+IA
Sbjct: 141 QNYGRIIXTASASGIYGNFGQA--NYSAAKLGLLGLANTLVIEGRKNNIHCNTIA 193
>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
pdb|3O38|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
pdb|3O38|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
pdb|3O38|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
Length = 266
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 68/155 (43%), Gaps = 28/155 (18%)
Query: 32 ISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM--- 86
+ V C+VT V + T K G+LD++ NNAG+ +D +E+ RV+
Sbjct: 75 VEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQT--PVVDMTDEEWDRVLNVT 132
Query: 87 ---IM------------VVFLGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVEL 131
+M V GV++ A++ + Y +K V+ L + +E
Sbjct: 133 LTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEA 192
Query: 132 GQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELL 166
++ +R+N+++ ++ F ++K + ELL
Sbjct: 193 VEFGVRINAVSPSIARHKF------LEKTSSSELL 221
>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus
Thermophilus Hb8
pdb|2EKP|A Chain A, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|A Chain A, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|B Chain B, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|C Chain C, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|D Chain D, Structure Of Tt0495 Protein From Thermus Thermophilus
Length = 239
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 21/105 (20%)
Query: 54 FGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIM---VVFL--------------GVLL 96
G L ++ + A + N+ + L+ E+ +RV+ + V FL G +L
Sbjct: 68 LGGLHVLVHAAAV--NVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVL 125
Query: 97 FTANLATETIGEA--LYDYLMSKYAVLGLMKNLCVELGQYDIRVN 139
F ++ T T G + Y +K A+LGL + L E + IRVN
Sbjct: 126 FIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVN 170
>pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein]
Reductase (Nadh) From Aquifex Aeolicus Vf5
pdb|2P91|B Chain B, Crystal Structure Of Enoyl-[acyl-Carrier-Protein]
Reductase (Nadh) From Aquifex Aeolicus Vf5
pdb|2P91|C Chain C, Crystal Structure Of Enoyl-[acyl-Carrier-Protein]
Reductase (Nadh) From Aquifex Aeolicus Vf5
pdb|2P91|D Chain D, Crystal Structure Of Enoyl-[acyl-Carrier-Protein]
Reductase (Nadh) From Aquifex Aeolicus Vf5
Length = 285
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 27/154 (17%)
Query: 16 DDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK--FGKLDIMFNNAGIISNMD-- 71
+ R + K F SD ++ C+V++D D+KN+ F + +G LDI+ ++ +
Sbjct: 60 EKRVREIAKGFGSDLVVK---CDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFK 116
Query: 72 RTTLDTDNEKVKRVMIMVVF--------LGVLLFTANLATETIGEALYDYLMSKYAVLGL 123
+DT E K M + V+ L L+ N A T+ + ++ Y V+G+
Sbjct: 117 GGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYNVMGI 176
Query: 124 MKN--------LCVELGQYDIRVNSIAHIVSATP 149
K L ++ ++ R+N+I SA P
Sbjct: 177 AKAALESTVRYLAYDIAKHGHRINAI----SAGP 206
>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|B Chain B, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|C Chain C, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|D Chain D, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
Length = 254
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 22/106 (20%)
Query: 51 FTKFGKLDIMFNNAGIISNMDRTT--LDTDNEKVKRVM-------------IMVVFL--- 92
F + ++D++ NNAGI MD T + +E +RV+ ++ + L
Sbjct: 79 FETYSRIDVLCNNAGI---MDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG 135
Query: 93 -GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIR 137
GV++ TA++A G A Y ++K+ ++GL +++ G IR
Sbjct: 136 KGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIR 181
>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|B Chain B, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|C Chain C, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|D Chain D, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3RWB|A Chain A, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|B Chain B, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|C Chain C, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|D Chain D, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
Length = 247
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 61/151 (40%), Gaps = 30/151 (19%)
Query: 35 VCCNVTIDSDVKNVFDFTKF--GKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFL 92
+ +++ VK +F + G +DI+ NNA I+ + +D D+ R +I V
Sbjct: 57 IAADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHW---RKIIDVNLT 113
Query: 93 GVLLFT---------ANLATETIGEA----------LYDYLMSKYAVLGLMKNLCVELGQ 133
G + T A A I A + Y+ +K V+G + L ELG+
Sbjct: 114 GTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGK 173
Query: 134 YDIRVNSIAHIVSATPFFCNAMGIDKKTFKE 164
Y+I N++ TP + G+ E
Sbjct: 174 YNITANAV------TPGLIESDGVKASPHNE 198
>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DBZ|B Chain B, Crystal Structure Of V151l Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 17/118 (14%)
Query: 53 KFGKLDIMFNNAGIISN------MDRTTLD---TDNEKVKRVMIMVVFLGVLLFTA---- 99
++G +D++ NNAG D LD T+ V RV V+ G +L
Sbjct: 100 RYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRI 159
Query: 100 -NLATETIGEAL---YDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCN 153
N+A+ + L Y SK+ V+G K L +EL + I VN++ TP +
Sbjct: 160 VNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAAS 217
>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|B Chain B, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|C Chain C, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|D Chain D, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|E Chain E, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|F Chain F, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
Length = 327
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 21/115 (18%)
Query: 45 VKNVFDFTKFGKLDIMFNNAGIISNMDRTTL-DTDNEKVKRVMIMVVF------------ 91
VK D FG++D++ NNAGI+ + + D D + + RV + F
Sbjct: 104 VKTALD--AFGRIDVVVNNAGILRDRSFARISDEDWDIIHRVHLRGSFQVTRAAWEHMKK 161
Query: 92 --LGVLLFTANLAT--ETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
G ++ T++ + G+A +Y +K +LGL +L +E + +I N+IA
Sbjct: 162 QKYGRIIMTSSASGIYGNFGQA--NYSAAKLGLLGLANSLAIEGRKSNIHCNTIA 214
>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli
Cfn 42
pdb|4E3Z|B Chain B, Crystal Structure Of A Oxidoreductase From Rhizobium Etli
Cfn 42
Length = 272
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 50/131 (38%), Gaps = 28/131 (21%)
Query: 39 VTIDSDVKNVFDFT--------KFGKLDIMFNNAGII---SNMDRTTLDT---------- 77
V I DV N D +FG+LD + NNAGI+ +D +++
Sbjct: 79 VAIPGDVGNAADIAAXFSAVDRQFGRLDGLVNNAGIVDYPQRVDEXSVERIERXLRVNVT 138
Query: 78 -----DNEKVKRVMIMVVFLGVLLFTANLATETIGEALY--DYLMSKYAVLGLMKNLCVE 130
E V+R + G + + +G A DY SK A+ L E
Sbjct: 139 GSILCAAEAVRRXSRLYSGQGGAIVNVSSXAAILGSATQYVDYAASKAAIDTFTIGLARE 198
Query: 131 LGQYDIRVNSI 141
+ IRVN++
Sbjct: 199 VAAEGIRVNAV 209
>pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
pdb|1MXH|B Chain B, Crystal Structure Of Substrate Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
pdb|1MXH|C Chain C, Crystal Structure Of Substrate Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
pdb|1MXH|D Chain D, Crystal Structure Of Substrate Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
Length = 276
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 60/159 (37%), Gaps = 37/159 (23%)
Query: 22 LCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGII------------SN 69
LCK S CC ID F FG+ D++ NNA
Sbjct: 66 LCKGDLSLSSSLLDCCEDIIDCS------FRAFGRCDVLVNNASAYYPTPLLPGDDTNGA 119
Query: 70 MDRTTLDTD------NEKVKRVMIMVVFL-----GVLLFTANLATETIGEALYD------ 112
D +D + V + ++ F G + NL+ + +A+ D
Sbjct: 120 ADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGF 179
Query: 113 --YLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
Y M+K+A+ GL + +EL IRVN++A +S P
Sbjct: 180 CVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP 218
>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|B Chain B, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|C Chain C, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|D Chain D, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|E Chain E, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|F Chain F, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|G Chain G, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|H Chain H, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
Length = 256
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 70/190 (36%), Gaps = 32/190 (16%)
Query: 9 VIIADVQDDLCRALCKEFDSDELISYVCCNVTID-SDVKNVFDFTK-----FGKLDIMFN 62
V IAD D +A+ E + V +D SD VF + G D++ N
Sbjct: 29 VAIADYNDATAKAVASEINQ---AGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVN 85
Query: 63 NAGIISNMDRTTLDTD-NEKVKRVMIMVVFLGVLLFTANLATETIGEALYD--------- 112
NAG+ + ++ + +KV + + V G+ E G + +
Sbjct: 86 NAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG 145
Query: 113 ------YLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKK----TF 162
Y SK+AV GL + +L I VN + TP + ID++
Sbjct: 146 NPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAE---IDRQVSEAAG 202
Query: 163 KELLYASANL 172
K L Y +A
Sbjct: 203 KPLGYGTAEF 212
>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And
Inhibitor Emodin
pdb|2RHR|A Chain A, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And
Inhibitor Emodin
Length = 277
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 17/118 (14%)
Query: 53 KFGKLDIMFNNAGIISN------MDRTTLD---TDNEKVKRVMIMVVFLGVLLFTA---- 99
++G +D++ NNAG + D LD T+ V RV V+ G +L
Sbjct: 96 RYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRI 155
Query: 100 -NLATETIGEAL---YDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCN 153
N+A+ + + Y SK+ V+G K L +EL + I VN++ TP +
Sbjct: 156 VNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAAS 213
>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3CSD|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3QRW|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph
pdb|3QRW|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph
pdb|3RI3|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3RI3|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
Length = 281
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 17/118 (14%)
Query: 53 KFGKLDIMFNNAGIISN------MDRTTLD---TDNEKVKRVMIMVVFLGVLLFTA---- 99
++G +D++ NNAG + D LD T+ V RV V+ G +L
Sbjct: 100 RYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRI 159
Query: 100 -NLATETIGEAL---YDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCN 153
N+A+ + + Y SK+ V+G K L +EL + I VN++ TP +
Sbjct: 160 VNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAAS 217
>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
pdb|2PD6|B Chain B, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
pdb|2PD6|C Chain C, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
pdb|2PD6|D Chain D, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
Length = 264
Score = 34.7 bits (78), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 112 DYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF 150
+Y SK V+GL + ELG++ IR NS+ ATP
Sbjct: 164 NYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPM 202
>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And Estradiol
pdb|1E6W|B Chain B, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And Estradiol
pdb|1E6W|C Chain C, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And Estradiol
pdb|1E6W|D Chain D, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And Estradiol
Length = 260
Score = 34.7 bits (78), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 73/182 (40%), Gaps = 35/182 (19%)
Query: 2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK--FGKLDI 59
+ A ++ DV + K+ + + + NVT + +V+ K FG++D+
Sbjct: 29 LVGQGATAVLLDVPNSEGETEAKKLGGNCI--FAPANVTSEKEVQAALTLAKEKFGRIDV 86
Query: 60 MFNNAGII-------SNMDRTTLDTDNEKVKRVMIMVVF--------------------L 92
N AGI ++ D ++V V ++ F
Sbjct: 87 AVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQR 146
Query: 93 GVLLFTANLAT--ETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF 150
GV++ TA++A +G+A Y SK ++G+ + +L IRV +IA + ATP
Sbjct: 147 GVIINTASVAAFEGQVGQAAYS--ASKGGIVGMTLPIARDLAPIGIRVVTIAPGLFATPL 204
Query: 151 FC 152
Sbjct: 205 LT 206
>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
pdb|3NDR|B Chain B, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
pdb|3NDR|C Chain C, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
pdb|3NDR|D Chain D, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
Length = 247
Score = 34.7 bits (78), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 28/129 (21%)
Query: 55 GKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFT---------ANLATET 105
G +DI+ NNA I+ + +D D+ R +I V G + T A A
Sbjct: 79 GGIDILVNNASIVPFVAWDDVDLDHW---RKIIDVNLTGTFIVTRAGTDQXRAAGKAGRV 135
Query: 106 IGEA----------LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAM 155
I A Y+ +K V+G + L ELG+Y+I N++ TP +
Sbjct: 136 ISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELGKYNITANAV------TPGLIESD 189
Query: 156 GIDKKTFKE 164
G+ E
Sbjct: 190 GVKASPHNE 198
>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh
pdb|1E3S|B Chain B, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh
pdb|1E3S|C Chain C, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh
pdb|1E3S|D Chain D, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh
pdb|1E3W|B Chain B, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And 3-Keto Butyrate
pdb|1E3W|C Chain C, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And 3-Keto Butyrate
pdb|1E3W|D Chain D, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And 3-Keto Butyrate
Length = 261
Score = 34.7 bits (78), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 73/182 (40%), Gaps = 35/182 (19%)
Query: 2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK--FGKLDI 59
+ A ++ DV + K+ + + + NVT + +V+ K FG++D+
Sbjct: 30 LVGQGATAVLLDVPNSEGETEAKKLGGNCI--FAPANVTSEKEVQAALTLAKEKFGRIDV 87
Query: 60 MFNNAGII-------SNMDRTTLDTDNEKVKRVMIMVVF--------------------L 92
N AGI ++ D ++V V ++ F
Sbjct: 88 AVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQR 147
Query: 93 GVLLFTANLAT--ETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF 150
GV++ TA++A +G+A Y SK ++G+ + +L IRV +IA + ATP
Sbjct: 148 GVIINTASVAAFEGQVGQAAYS--ASKGGIVGMTLPIARDLAPIGIRVVTIAPGLFATPL 205
Query: 151 FC 152
Sbjct: 206 LT 207
>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And 3-Keto Butyrate
Length = 261
Score = 34.7 bits (78), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 73/182 (40%), Gaps = 35/182 (19%)
Query: 2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK--FGKLDI 59
+ A ++ DV + K+ + + + NVT + +V+ K FG++D+
Sbjct: 30 LVGQGATAVLLDVPNSEGETEAKKLGGNCI--FAPANVTSEKEVQAALTLAKEKFGRIDV 87
Query: 60 MFNNAGII-------SNMDRTTLDTDNEKVKRVMIMVVF--------------------L 92
N AGI ++ D ++V V ++ F
Sbjct: 88 AVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQR 147
Query: 93 GVLLFTANLAT--ETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF 150
GV++ TA++A +G+A Y SK ++G+ + +L IRV +IA + ATP
Sbjct: 148 GVIINTASVAAFEGQVGQAAYS--ASKGGIVGMTLPIARDLAPIGIRVVTIAPGLFATPL 205
Query: 151 FC 152
Sbjct: 206 LT 207
>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium
Smegmatis
Length = 454
Score = 34.7 bits (78), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 68/176 (38%), Gaps = 52/176 (29%)
Query: 1 VFIQHRAKVIIADV---QDDLCR--------ALCKEFDSDELISYVCCNVTIDSDVKNVF 49
VF + A V+ DV +DL R AL + +D+ + + +VT
Sbjct: 232 VFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHG----- 286
Query: 50 DFTKFGKLDIMFNNAGI-----ISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANL-AT 103
GK+DI+ NNAGI ++NMD EK +I V L T L
Sbjct: 287 -----GKVDILVNNAGITRDKLLANMD--------EKRWDAVIAVNLLAPQRLTEGLVGN 333
Query: 104 ETIGE-----------------ALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
TIGE +Y +K ++GL + L L I +N++A
Sbjct: 334 GTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLADKGITINAVA 389
>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor'
pdb|3IMF|B Chain B, 1.99 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor'
pdb|3IMF|C Chain C, 1.99 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor'
pdb|3IMF|D Chain D, 1.99 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor'
Length = 257
Score = 34.3 bits (77), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 52/129 (40%), Gaps = 25/129 (19%)
Query: 39 VTIDSDVKNVFDFTK--------FGKLDIMFNNAG--IISNMDRTTLDTDN--------- 79
+T+ DV+N D K FG++DI+ NNA I + +++ N
Sbjct: 58 LTVQXDVRNTDDIQKXIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNG 117
Query: 80 -----EKVKRVMIMVVFLGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQ- 133
+ + + I G ++ G + +K VL K L VE G+
Sbjct: 118 TFYCSQAIGKYWIEKGIKGNIINXVATYAWDAGPGVIHSAAAKAGVLAXTKTLAVEWGRK 177
Query: 134 YDIRVNSIA 142
Y IRVN+IA
Sbjct: 178 YGIRVNAIA 186
>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
pdb|1HXH|B Chain B, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
pdb|1HXH|C Chain C, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
pdb|1HXH|D Chain D, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
Length = 253
Score = 34.3 bits (77), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 28/187 (14%)
Query: 1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
+ + AKV +D+ + + L E + +V +V+ ++D V + G L+
Sbjct: 25 LLLGEGAKVAFSDINEAAGQQLAAELGERSM--FVRHDVSSEADWTLVMAAVQRRLGTLN 82
Query: 59 IMFNNAGII--SNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIG--------- 107
++ NNAGI+ +M+ L+ D ++ ++ VF+G A + ET G
Sbjct: 83 VLVNNAGILLPGDMETGRLE-DFSRLLKINTESVFIGCQQGIAAM-KETGGSIINMASVS 140
Query: 108 -----EALYDYLMSKYAVLGLMKNL---CVELGQYDIRVNSIAHIVSATPFFCNAMGIDK 159
E Y SK AV L + C + G Y IRVNSI TP ++ K
Sbjct: 141 SWLPIEQYAGYSASKAAVSALTRAAALSCRKQG-YAIRVNSIHPDGIYTPMMQASL--PK 197
Query: 160 KTFKELL 166
KE++
Sbjct: 198 GVSKEMV 204
>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate
3-Dehydrogenase From Agrobacterium Tumefaciens (Target
Efi-506435) With Bound Nadp
pdb|4HP8|B Chain B, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate
3-Dehydrogenase From Agrobacterium Tumefaciens (Target
Efi-506435) With Bound Nadp
Length = 247
Score = 34.3 bits (77), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 46/115 (40%), Gaps = 31/115 (26%)
Query: 51 FTKFGKLDIMFNNAGIISNMDR---TTLDTDNEKVKRVMIMVVFLGVLLFT--------- 98
FT G DI+ NNAGII D + LD D +M V L L FT
Sbjct: 75 FTDAG-FDILVNNAGIIRRADSVEFSELDWDE-------VMDVNLKALFFTTQAFAKELL 126
Query: 99 -----------ANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
A+L + G + Y +K+ V GL K L E I VN+IA
Sbjct: 127 AKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIA 181
>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DC0|B Chain B, Crystal Structure Of F189w Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 34.3 bits (77), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 17/118 (14%)
Query: 53 KFGKLDIMFNNAGIISN------MDRTTLD---TDNEKVKRVMIMVVFLGVLLFTA---- 99
++G +D++ NNAG D LD T+ V RV V+ G +L
Sbjct: 100 RYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRI 159
Query: 100 -NLATETIGEAL---YDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCN 153
N+A+ + + Y SK+ V+G K L +EL + I VN++ TP +
Sbjct: 160 VNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGWVETPMAAS 217
>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And
Inhibitor Emodin
pdb|2RH4|B Chain B, Actinorhodin Ketoreductase, Actkr, With Nadph And
Inhibitor Emodin
pdb|2RHC|B Chain B, Actinorhodin Ketordeuctase, Actkr, With Nadp+ And
Inhibitor Emodin
pdb|2RHC|A Chain A, Actinorhodin Ketordeuctase, Actkr, With Nadp+ And
Inhibitor Emodin
Length = 277
Score = 34.3 bits (77), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 17/118 (14%)
Query: 53 KFGKLDIMFNNAGIISN------MDRTTLD---TDNEKVKRVMIMVVFLGVLLFTA---- 99
++G +D++ NNAG D LD T+ V RV V+ G +L
Sbjct: 96 RYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRI 155
Query: 100 -NLATETIGEAL---YDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCN 153
N+A+ + + Y SK+ V+G K L +EL + I VN++ TP +
Sbjct: 156 VNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAAS 213
>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain
B-356.
pdb|2Y93|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain
B-356.
pdb|2Y99|A Chain A, Crystal Structure Of
Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase
(Bphb)from Pandoraea Pnomenusa Strain B-356 Complex With
Co-Enzyme Nad
pdb|2Y99|B Chain B, Crystal Structure Of
Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase
(Bphb)from Pandoraea Pnomenusa Strain B-356 Complex With
Co-Enzyme Nad
pdb|3ZV3|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-
356 In Intermediate State Of Substrate Binding Loop
pdb|3ZV3|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-
356 In Intermediate State Of Substrate Binding Loop
pdb|3ZV4|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 In Apo Form At 1.8 Angstrom
pdb|3ZV4|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 In Apo Form At 1.8 Angstrom
pdb|3ZV5|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product 2,3-
Dihydroxybiphenyl
pdb|3ZV5|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product 2,3-
Dihydroxybiphenyl
pdb|3ZV6|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product Analog 4,4'-
Dihydroxybiphenyl
pdb|3ZV6|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product Analog 4,4'-
Dihydroxybiphenyl
Length = 281
Score = 33.9 bits (76), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 36/168 (21%)
Query: 2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFD--------FTK 53
F+ A+V + D + R L +++ V + DV+++ D
Sbjct: 25 FVAEGARVAVLDKSAERLRELE--------VAHGGNAVGVVGDVRSLQDQKRAAERCLAA 76
Query: 54 FGKLDIMFNNAGI------ISNMDRTTLDTDNEKVKRVMI-------------MVVFLGV 94
FGK+D + NAGI ++++ +D + + V + +V G
Sbjct: 77 FGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGS 136
Query: 95 LLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
++FT + A Y +K+AV+GL++ + EL + +RVN +A
Sbjct: 137 VVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAPH-VRVNGVA 183
>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DC1|B Chain B, Crystal Structure Of Y202f Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 33.9 bits (76), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 17/118 (14%)
Query: 53 KFGKLDIMFNNAGIISN------MDRTTLD---TDNEKVKRVMIMVVFLGVLLFTA---- 99
++G +D++ NNAG D LD T+ V RV V+ G +L
Sbjct: 100 RYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRI 159
Query: 100 -NLATETIGEAL---YDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCN 153
N+A+ + + Y SK+ V+G K L +EL + I VN++ TP +
Sbjct: 160 VNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAAS 217
>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp
Bound
pdb|1X7G|B Chain B, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp
Bound
pdb|1X7H|A Chain A, Actinorhodin Polyketide Ketoreductase, With Nadph Bound
pdb|1X7H|B Chain B, Actinorhodin Polyketide Ketoreductase, With Nadph Bound
pdb|1XR3|A Chain A, Actinorhodin Polyketide Ketoreductase With Nadp And The
Inhibitor Isoniazid Bound
pdb|1XR3|B Chain B, Actinorhodin Polyketide Ketoreductase With Nadp And The
Inhibitor Isoniazid Bound
Length = 261
Score = 33.9 bits (76), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 17/118 (14%)
Query: 53 KFGKLDIMFNNAGIISN------MDRTTLD---TDNEKVKRVMIMVVFLGVLLFTA---- 99
++G +D++ NNAG D LD T+ V RV V+ G +L
Sbjct: 80 RYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRI 139
Query: 100 -NLATETIGEAL---YDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCN 153
N+A+ + + Y SK+ V+G K L +EL + I VN++ TP +
Sbjct: 140 VNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAAS 197
>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase
pdb|1W4Z|B Chain B, Structure Of Actinorhodin Polyketide (Actiii) Reductase
Length = 281
Score = 33.9 bits (76), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 17/118 (14%)
Query: 53 KFGKLDIMFNNAGIISN------MDRTTLD---TDNEKVKRVMIMVVFLGVLLFTA---- 99
++G +D++ NNAG D LD T+ V RV V+ G +L
Sbjct: 100 RYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRI 159
Query: 100 -NLATETIGEAL---YDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCN 153
N+A+ + + Y SK+ V+G K L +EL + I VN++ TP +
Sbjct: 160 VNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAAS 217
>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|B Chain B, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|C Chain C, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|D Chain D, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
Length = 293
Score = 33.9 bits (76), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 64/166 (38%), Gaps = 30/166 (18%)
Query: 1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTID-SDVKNVFDFTK-----F 54
VF + A V +A ++ E EL + V +D SD + D + F
Sbjct: 60 VFARAGANVAVAARSPRELSSVTAELG--ELGAGNVIGVRLDVSDPGSCADAARTVVDAF 117
Query: 55 GKLDIMFNNAGIISNMDRTTLDT-DNEKVKRVM-----------------IMVVFLGVLL 96
G LD++ NAGI LDT E++ V+ + G ++
Sbjct: 118 GALDVVCANAGIFPE---ARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVI 174
Query: 97 FTANLATETIG-EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI 141
T+++ G Y SK A LG M+ +EL + VN+I
Sbjct: 175 LTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAI 220
>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
pdb|3VTZ|B Chain B, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
pdb|3VTZ|C Chain C, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
pdb|3VTZ|D Chain D, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
Length = 269
Score = 33.9 bits (76), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 55/117 (47%), Gaps = 16/117 (13%)
Query: 53 KFGKLDIMFNNAGI---------ISNMDRTTLDTD------NEKVKRVMIMVVFLGVLLF 97
K+G++DI+ NNAGI + + R +D + K +++ + G ++
Sbjct: 78 KYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIIN 137
Query: 98 TANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNA 154
A++ + + Y+ SK+A+LGL +++ ++ IR N++ TP A
Sbjct: 138 IASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKA 193
>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4)
From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom
Resolution
pdb|3V1T|D Chain D, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4)
From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom
Resolution
pdb|3V1U|A Chain A, Crystal Structure Of A Beta-Ketoacyl Reductase Fabg4 From
Mycobacterium Tuberculosis H37rv Complexed With Nad+ And
Hexanoyl-Coa At 2.5 Angstrom Resolution
Length = 462
Score = 33.5 bits (75), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 73/191 (38%), Gaps = 48/191 (25%)
Query: 1 VFIQHRAKVIIADVQ---DDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK---F 54
VF + A V+ DV+ ++L K + + +VT D V + + +
Sbjct: 240 VFARDGAHVVAIDVESAAENLAETASKVGGT-----ALWLDVTADDAVDKISEHLRDHHG 294
Query: 55 GKLDIMFNNAGI-----ISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANL-ATETIGE 108
GK DI+ NNAGI ++NMD D ++ V L L T L +IGE
Sbjct: 295 GKADILVNNAGITRDKLLANMDDARWD--------AVLAVNLLAPLRLTEGLVGNGSIGE 346
Query: 109 -----------------ALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA------HIV 145
+Y +K ++G+ + L L I +N++A +
Sbjct: 347 GGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQMT 406
Query: 146 SATPFFCNAMG 156
+A P +G
Sbjct: 407 AAIPLATREVG 417
>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
pdb|3Q6I|B Chain B, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
pdb|3Q6I|C Chain C, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
pdb|3Q6I|D Chain D, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
Length = 446
Score = 33.5 bits (75), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 73/191 (38%), Gaps = 48/191 (25%)
Query: 1 VFIQHRAKVIIADVQ---DDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK---F 54
VF + A V+ DV+ ++L K + + +VT D V + + +
Sbjct: 224 VFARDGAHVVAIDVESAAENLAETASKVGGT-----ALWLDVTADDAVDKISEHLRDHHG 278
Query: 55 GKLDIMFNNAGI-----ISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANL-ATETIGE 108
GK DI+ NNAGI ++NMD D ++ V L L T L +IGE
Sbjct: 279 GKADILVNNAGITRDKLLANMDDARWD--------AVLAVNLLAPLRLTEGLVGNGSIGE 330
Query: 109 -----------------ALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA------HIV 145
+Y +K ++G+ + L L I +N++A +
Sbjct: 331 GGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQMT 390
Query: 146 SATPFFCNAMG 156
+A P +G
Sbjct: 391 AAIPLATREVG 401
>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Mycobacterium Tuberculosis
pdb|3LLS|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Mycobacterium Tuberculosis
Length = 475
Score = 33.5 bits (75), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 73/191 (38%), Gaps = 48/191 (25%)
Query: 1 VFIQHRAKVIIADVQ---DDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK---F 54
VF + A V+ DV+ ++L K + + +VT D V + + +
Sbjct: 253 VFARDGAHVVAIDVESAAENLAETASKVGGT-----ALWLDVTADDAVDKISEHLRDHHG 307
Query: 55 GKLDIMFNNAGI-----ISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANL-ATETIGE 108
GK DI+ NNAGI ++NMD D ++ V L L T L +IGE
Sbjct: 308 GKADILVNNAGITRDKLLANMDDARWD--------AVLAVNLLAPLRLTEGLVGNGSIGE 359
Query: 109 -----------------ALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA------HIV 145
+Y +K ++G+ + L L I +N++A +
Sbjct: 360 GGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQMT 419
Query: 146 SATPFFCNAMG 156
+A P +G
Sbjct: 420 AAIPLATREVG 430
>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A
Putative Ketoacyl Reductase (Fabg4) From Mycobacterium
Tuberculosis H37rv At 2.5 Angstrom Resolution
pdb|3M1L|B Chain B, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A
Putative Ketoacyl Reductase (Fabg4) From Mycobacterium
Tuberculosis H37rv At 2.5 Angstrom Resolution
Length = 432
Score = 33.5 bits (75), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 73/191 (38%), Gaps = 48/191 (25%)
Query: 1 VFIQHRAKVIIADVQ---DDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK---F 54
VF + A V+ DV+ ++L K + + +VT D V + + +
Sbjct: 216 VFARDGAHVVAIDVESAAENLAETASKVGGT-----ALWLDVTADDAVDKISEHLRDHHG 270
Query: 55 GKLDIMFNNAGI-----ISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANL-ATETIGE 108
GK DI+ NNAGI ++NMD D ++ V L L T L +IGE
Sbjct: 271 GKADILVNNAGITRDKLLANMDDARWD--------AVLAVNLLAPLRLTEGLVGNGSIGE 322
Query: 109 -----------------ALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA------HIV 145
+Y +K ++G+ + L L I +N++A +
Sbjct: 323 GGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQMT 382
Query: 146 SATPFFCNAMG 156
+A P +G
Sbjct: 383 AAIPLATREVG 393
>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
pdb|4FW8|B Chain B, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
pdb|4FW8|C Chain C, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
pdb|4FW8|D Chain D, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
Length = 454
Score = 33.5 bits (75), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 73/191 (38%), Gaps = 48/191 (25%)
Query: 1 VFIQHRAKVIIADVQ---DDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK---F 54
VF + A V+ DV+ ++L K + + +VT D V + + +
Sbjct: 232 VFARDGAHVVAIDVESAAENLAETASKVGGT-----ALWLDVTADDAVDKISEHLRDHHG 286
Query: 55 GKLDIMFNNAGI-----ISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANL-ATETIGE 108
GK DI+ NNAGI ++NMD D ++ V L L T L +IGE
Sbjct: 287 GKADILVNNAGITRDKLLANMDDARWD--------AVLAVNLLAPLRLTEGLVGNGSIGE 338
Query: 109 -----------------ALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA------HIV 145
+Y +K ++G+ + L L I +N++A +
Sbjct: 339 GGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQMT 398
Query: 146 SATPFFCNAMG 156
+A P +G
Sbjct: 399 AAIPLATREVG 409
>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase
Type1, Complexed With Nad+
Length = 267
Score = 33.5 bits (75), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 68/157 (43%), Gaps = 36/157 (22%)
Query: 19 CRA-LCKEFDSDELISYVCCNVTIDSDVKNVFD--FTKFGKLDIMFNNAGIISNMDRTTL 75
C+A L ++F+ + + ++ C+V +++ F FG+LDI+ NNAG+ +
Sbjct: 47 CKAALHEQFEPQKTL-FIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNN------- 98
Query: 76 DTDNEKVKRVMIMVVFLGVLLFTANLATETIGEA-----------------LYDYLMSKY 118
+ + EK ++ ++ V G L ++ + GE Y SK+
Sbjct: 99 EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKH 158
Query: 119 AVLGLMKN--LCVELGQYDIRVNSIAHIVSATPFFCN 153
++G ++ L L +R+N+I P F N
Sbjct: 159 GIVGFTRSAALAANLMNSGVRLNAIC------PGFVN 189
>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|C Chain C, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|E Chain E, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|G Chain G, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
Length = 263
Score = 33.1 bits (74), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 35/204 (17%)
Query: 2 FIQHRAKVIIADVQDD----LCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDFTKFG 55
F + A +++ Q D R+L ++F E+ V +D+ V++V + FG
Sbjct: 27 FAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVR--SSFG 84
Query: 56 KLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLL---FTANLATETIGEALYD 112
DI+ NNAG SN T ++ +EK + ++V V L + G +++
Sbjct: 85 GADILVNNAGTGSN--ETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHN 142
Query: 113 --------------YLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGID 158
Y ++K A++ K L E+ + +IRVN I + TP +
Sbjct: 143 ASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWI------ 196
Query: 159 KKTFKELLY-ASANLKGVVLKAAD 181
KT KEL + KG + AD
Sbjct: 197 -KTAKELTKDNGGDWKGYLQSVAD 219
>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From
Streptococcus Suis Type 2
pdb|3O03|A Chain A, Quaternary Complex Structure Of Gluconate 5-Dehydrogenase
From Streptococcus Suis Type 2
Length = 291
Score = 33.1 bits (74), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 17/130 (13%)
Query: 37 CNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMD---------RTTLDTD-NEK--V 82
C+VT + ++ + ++ G +DI+ NNAGII + R +D D N V
Sbjct: 90 CDVTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIV 149
Query: 83 KRVMIMVVF---LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN 139
+ +I + G ++ ++ +E E + Y +K + L KN+ E G+ +I+ N
Sbjct: 150 SKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCN 209
Query: 140 SIAHIVSATP 149
I ATP
Sbjct: 210 GIGPGYIATP 219
>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|E Chain E, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|F Chain F, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|G Chain G, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|H Chain H, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
Length = 255
Score = 33.1 bits (74), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 17/105 (16%)
Query: 53 KFGKLDIMFNNAGI--ISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIGEAL 110
+FG +DI+ NNAGI ++ +++ L++ +K+ + + VF G L + G +
Sbjct: 76 EFGGVDILVNNAGIQHVAPVEQFPLES-WDKIIALNLSAVFHGTRLALPGMRARNWGRII 134
Query: 111 --------------YDYLMSKYAVLGLMKNLCVELGQYDIRVNSI 141
Y+ +K+ V+GL K + +E ++ N+I
Sbjct: 135 NIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAI 179
>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|N Chain N, Architecture Of Mammalian Fatty Acid Synthase
Length = 226
Score = 33.1 bits (74), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 12/145 (8%)
Query: 7 AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFD--FTKFGKLDIMFNNA 64
AKVI ++ +A+ ++ + NVT + +++V + +FG++DI+ NNA
Sbjct: 30 AKVIGTATSENGAQAISDYLGANG--KGLMLNVTDPASIESVLEKIRAEFGEVDILVNNA 87
Query: 65 GIISN--MDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATE-----TIGEALYDYLMSK 117
GI + + R + N+ ++ + V L + A + TIG +Y +K
Sbjct: 88 GITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIG-GQANYAAAK 146
Query: 118 YAVLGLMKNLCVELGQYDIRVNSIA 142
++G K+L E+ I VN +A
Sbjct: 147 AGLIGFSKSLAREVASRGITVNVVA 171
>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|B Chain B, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|C Chain C, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|D Chain D, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|E Chain E, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|F Chain F, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|G Chain G, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|H Chain H, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
Length = 291
Score = 33.1 bits (74), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 94 VLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCN 153
V++ TA++ E L DY +K A++ ++L L Q IRVN +A TP +
Sbjct: 177 VIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPS 236
Query: 154 A 154
+
Sbjct: 237 S 237
>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|B Chain B, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|C Chain C, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|D Chain D, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|E Chain E, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|F Chain F, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|G Chain G, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|H Chain H, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
Length = 291
Score = 33.1 bits (74), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 94 VLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCN 153
V++ TA++ E L DY +K A++ ++L L Q IRVN +A TP +
Sbjct: 177 VIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPS 236
Query: 154 A 154
+
Sbjct: 237 S 237
>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum
Length = 285
Score = 33.1 bits (74), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 19/109 (17%)
Query: 51 FTKFGKLDIMFNNAGII-------------SNMDRTTLDT---DNEKVKRVMIMVVFLGV 94
T+ +DI+ NNAGI ++ RT L++ + + + MI + +
Sbjct: 116 LTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRI 175
Query: 95 LLFTANLA-TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
+ ++ + T +G+A +Y SK V+G K+L EL +I VN+IA
Sbjct: 176 INISSIVGLTGNVGQA--NYSSSKAGVIGFTKSLAKELASRNITVNAIA 222
>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE
SDR FROM Xanthobacter Autotrophicus Py2
Length = 272
Score = 32.7 bits (73), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 22/153 (14%)
Query: 9 VIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNNAGI 66
V +A + D + E D L V +VT V+ +F T KFG++D++FNNAG
Sbjct: 55 VALAGRRLDALQETAAEIGDDALC--VPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGT 112
Query: 67 ----ISNMD------RTTLDTD--------NEKVKRVMIMVVFLGVLLFTANLATETIGE 108
I D + +DT+ E + G ++ +++ +
Sbjct: 113 GAPAIPXEDLTFAQWKQVVDTNLTGPFLCTQEAFRVXKAQEPRGGRIINNGSISATSPRP 172
Query: 109 ALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI 141
Y +K+A+ GL K+ ++ +DI I
Sbjct: 173 YSAPYTATKHAITGLTKSTSLDGRVHDIACGQI 205
>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|E Chain E, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|F Chain F, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
Length = 322
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 57/138 (41%), Gaps = 44/138 (31%)
Query: 43 SDVKNVFDFTK-----------FGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF 91
+D NV D+ + FG LD++ NNAGI+ DR +T E+ ++ V
Sbjct: 90 ADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIV--RDRMIANTSEEEFD--AVIAVH 145
Query: 92 L-------------------------GVLLFTANLA--TETIGEALYDYLMSKYAVLGLM 124
L G ++ T++ A ++G+ Y + A L L+
Sbjct: 146 LKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTLV 205
Query: 125 KNLCVELGQYDIRVNSIA 142
E+G+Y + VN+IA
Sbjct: 206 G--AAEMGRYGVTVNAIA 221
>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|B Chain B, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|C Chain C, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|D Chain D, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
Length = 269
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 19/106 (17%)
Query: 54 FGKLDIMFNNAGIISN---MDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIGE-- 108
FGK+D++ NNAGI + M T D D V R + +F F A + G
Sbjct: 101 FGKVDVLINNAGITRDATFMKMTKGDWD--AVMRTDLDAMFNVTKQFIAGMVERRFGRIV 158
Query: 109 ------------ALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
+Y +K + G K L +E + I VN+++
Sbjct: 159 NIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVS 204
>pdb|3I1J|A Chain A, Structure Of A Putative Short Chain Dehydrogenase From
Pseudomonas Syringae
pdb|3I1J|B Chain B, Structure Of A Putative Short Chain Dehydrogenase From
Pseudomonas Syringae
Length = 247
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 23/109 (21%)
Query: 53 KFGKLDIMFNNAGIISNMDRTTL----DTDNEKVKRVMIMVVFL--------------GV 94
+FG+LD + +NA II RT L D D +V V + F
Sbjct: 91 EFGRLDGLLHNASIIG--PRTPLEQLPDEDFXQVXHVNVNATFXLTRALLPLLKRSEDAS 148
Query: 95 LLFTANLATETIGEALYD-YLMSKYAVLGLMKNLCVEL-GQYDIRVNSI 141
+ FT++ + G A + Y +SK+A GL + L EL G +R NSI
Sbjct: 149 IAFTSS-SVGRKGRANWGAYGVSKFATEGLXQTLADELEGVTAVRANSI 196
>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein
From Sinorhizobium Meliloti 1021 In Complex With Nadp
pdb|4ESO|B Chain B, Crystal Structure Of A Putative Oxidoreductase Protein
From Sinorhizobium Meliloti 1021 In Complex With Nadp
pdb|4ESO|C Chain C, Crystal Structure Of A Putative Oxidoreductase Protein
From Sinorhizobium Meliloti 1021 In Complex With Nadp
pdb|4ESO|D Chain D, Crystal Structure Of A Putative Oxidoreductase Protein
From Sinorhizobium Meliloti 1021 In Complex With Nadp
Length = 255
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 82 VKRVMIMVVFLGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI 141
V+R+ ++ G ++FT+++A E Y SK A++ L EL IRVNS+
Sbjct: 121 VQRLTPLIREGGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVNSV 180
Query: 142 AHIVSATP 149
+ TP
Sbjct: 181 SPGFIDTP 188
>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From
Staphylococcus Aureus Complex With Nadph
pdb|3SJ7|B Chain B, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From
Staphylococcus Aureus Complex With Nadph
Length = 252
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 63/142 (44%), Gaps = 18/142 (12%)
Query: 19 CRALCKEFDSDELISY-VCCNVTIDSDVKNVFD--FTKFGKLDIMFNNAGIISN------ 69
A+ +E + + S+ + NV +VK + ++FG LD++ NNAGI +
Sbjct: 48 AEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRM 107
Query: 70 MDRTTLDTDNEKVKRV---------MIMVVFLGVLLFTANLATETIGEALYDYLMSKYAV 120
++ D + +K V ++ G ++ +++ +Y+ +K V
Sbjct: 108 KEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGV 167
Query: 121 LGLMKNLCVELGQYDIRVNSIA 142
+GL K+ EL I VN++A
Sbjct: 168 IGLTKSAARELASRGITVNAVA 189
>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From
Sinorhizobium Meliloti 1021
pdb|3VC7|B Chain B, Crystal Structure Of A Putative Oxidoreductase From
Sinorhizobium Meliloti 1021
Length = 254
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 82 VKRVMIMVVFLGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI 141
V+R+ ++ G ++FT+++A E Y SK A++ L EL IRVNS+
Sbjct: 120 VQRLTPLIREGGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVNSV 179
Query: 142 AHIVSATP 149
+ TP
Sbjct: 180 SPGFIDTP 187
>pdb|3SX2|A Chain A, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|B Chain B, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|C Chain C, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|D Chain D, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|E Chain E, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|F Chain F, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|G Chain G, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|H Chain H, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
Length = 278
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 53 KFGKLDIMFNNAGI--ISNMDRTTLDTDN-------EKVKRVMIMVVFLG----VLLFTA 99
+ G+LDI+ NAGI +S D D + +K + +V G ++L ++
Sbjct: 99 ELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISS 158
Query: 100 NLATETIGEA---LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCN 153
+ +G A Y+ +K+ V+GLM+ L IRVNSI TP N
Sbjct: 159 SAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINN 215
>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate
5- Dehydrogenase From Beutenbergia Cavernae(Efi Target
Efi-502044) With Bound Nadp (Low Occupancy)
pdb|3UF0|B Chain B, Crystal Structure Of A Putative Nad(P) Dependent Gluconate
5- Dehydrogenase From Beutenbergia Cavernae(Efi Target
Efi-502044) With Bound Nadp (Low Occupancy)
Length = 273
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 56 KLDIMFNNAGIIS-------NMDRT----TLDTDNEKVKRVMIMVVFL----GVLLFTAN 100
++D++ NNAGII+ ++ R T++ D V L G ++ A+
Sbjct: 106 RVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIAS 165
Query: 101 LATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
+ + G + Y SK+AV+GL + L E + VN++A
Sbjct: 166 MLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALA 207
>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose Reveals The Structure Bases Of Its Catalytic
Mechanism And High Substrate Selectivity
pdb|3AI1|B Chain B, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose Reveals The Structure Bases Of Its Catalytic
Mechanism And High Substrate Selectivity
pdb|3AI2|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|B Chain B, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|H Chain H, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|D Chain D, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|E Chain E, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|C Chain C, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|F Chain F, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|G Chain G, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
Length = 263
Score = 32.0 bits (71), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 39/206 (18%)
Query: 2 FIQHRAKVIIADVQDD----LCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDFTKFG 55
F + A +++ Q D R+L ++F E+ V +D+ V++V + FG
Sbjct: 27 FAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVR--SSFG 84
Query: 56 KLDIMFNNAGIISNMDRTTLDTDNEKVK-----RVMIMVVFL------------GVLLFT 98
DI+ NNAG SN T ++ +EK + VM V G ++
Sbjct: 85 GADILVNNAGTGSN--ETIMEAADEKWQFYWELHVMAAVRLARGLVPGMRARGGGAIIHN 142
Query: 99 ANL-ATETIG-EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMG 156
A++ A + + E +Y+ ++K A++ K L E+ + +IRVN I + TP +
Sbjct: 143 ASICAVQPLWYEPIYN--VTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWI---- 196
Query: 157 IDKKTFKELLY-ASANLKGVVLKAAD 181
KT KEL + KG + AD
Sbjct: 197 ---KTAKELTKDNGGDWKGYLQSVAD 219
>pdb|3GRK|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
pdb|3GRK|B Chain B, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
pdb|3GRK|C Chain C, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
pdb|3GRK|D Chain D, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
pdb|3GRK|E Chain E, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
pdb|3GRK|F Chain F, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
pdb|3GRK|G Chain G, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
pdb|3GRK|H Chain H, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
Length = 293
Score = 32.0 bits (71), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 27/144 (18%)
Query: 28 SDELISYVC--CNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTT---LDTDNE 80
++EL ++V C+V + + VF+ K+GKLD + + G S+ D T +DT
Sbjct: 77 AEELGAFVAGHCDVADAASIDAVFETLEKKWGKLDFLVHAIGF-SDKDELTGRYIDTSEA 135
Query: 81 KVKRVMIMVVF-LGVLLFTANLATETIGEAL------YDYLMSKYAVLGL--------MK 125
M++ V+ L + A G L + +M Y V+G+ +K
Sbjct: 136 NFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNYNVMGVAKAALEASVK 195
Query: 126 NLCVELGQYDIRVNSIAHIVSATP 149
L V+LG +IRVN+I SA P
Sbjct: 196 YLAVDLGPQNIRVNAI----SAGP 215
>pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
pdb|1MXF|B Chain B, Crystal Structure Of Inhibitor Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
pdb|1MXF|C Chain C, Crystal Structure Of Inhibitor Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
pdb|1MXF|D Chain D, Crystal Structure Of Inhibitor Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
Length = 276
Score = 32.0 bits (71), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 58/159 (36%), Gaps = 37/159 (23%)
Query: 22 LCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGII------------SN 69
LCK S CC ID F FG+ D++ NNA
Sbjct: 66 LCKGDLSLSSSLLDCCEDIIDCS------FRAFGRCDVLVNNASAYYPTPLLPGDDTNGA 119
Query: 70 MDRTTLDTD------NEKVKRVMIMVVFL-----GVLLFTANLATETIGEALYD------ 112
D +D + V + ++ F G + NL+ + +A D
Sbjct: 120 ADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAXTDLPLPGF 179
Query: 113 --YLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
Y +K+A+ GL + +EL IRVN++A +S P
Sbjct: 180 CVYTXAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP 218
>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
pdb|3PK0|B Chain B, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
pdb|3PK0|C Chain C, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
pdb|3PK0|D Chain D, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
Length = 262
Score = 31.6 bits (70), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 16/105 (15%)
Query: 53 KFGKLDIMFNNAGIISNMDRTTLDTDN-EKVKRVMIMVVFL--------------GVLLF 97
+FG +D++ NAG+ + T+ + + V + F G ++
Sbjct: 85 EFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVL 144
Query: 98 TANLATETIG-EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI 141
T+++ G Y +K A LG M+ +EL + I VN+I
Sbjct: 145 TSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAI 189
>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol
pdb|1CYD|B Chain B, Carbonyl Reductase Complexed With Nadph And 2-Propanol
pdb|1CYD|C Chain C, Carbonyl Reductase Complexed With Nadph And 2-Propanol
pdb|1CYD|D Chain D, Carbonyl Reductase Complexed With Nadph And 2-Propanol
Length = 244
Score = 31.6 bits (70), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 25/127 (19%)
Query: 54 FGKLDIMFNNAGII----------SNMDRT------TLDTDNEKVKRVMIMVVFLGVLLF 97
G +D++ NNA ++ DR+ ++ ++ V R MI G ++
Sbjct: 74 IGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVN 133
Query: 98 TANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI---------AHIVSAT 148
+++ L Y +K A+ L K + +ELG + IRVNS+ VSA
Sbjct: 134 VSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSAD 193
Query: 149 PFFCNAM 155
P F +
Sbjct: 194 PEFARKL 200
>pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Rhizobium Meliloti
pdb|4DRY|B Chain B, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Rhizobium Meliloti
pdb|4DRY|C Chain C, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Rhizobium Meliloti
pdb|4DRY|D Chain D, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Rhizobium Meliloti
Length = 281
Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 61/158 (38%), Gaps = 26/158 (16%)
Query: 8 KVIIADVQDDLCRALCKEFD--SDELISYVCCNVTIDSDVKNVFDFTK--FGKLDIMFNN 63
V+I + D+ A E + ++ V C+V V +F + F +LD++ NN
Sbjct: 59 SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNN 118
Query: 64 AGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFT--------------------ANLAT 103
AG SN+ L+ + ++ G L T +++
Sbjct: 119 AG--SNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRXXKAQTPRGGRIINNGSISA 176
Query: 104 ETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI 141
+T Y +K+A+ GL K+ ++ +DI I
Sbjct: 177 QTPRPNSAPYTATKHAITGLTKSTALDGRXHDIACGQI 214
>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
pdb|3I4F|B Chain B, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
pdb|3I4F|C Chain C, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
pdb|3I4F|D Chain D, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
Length = 264
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 27 DSDELISYVCCNVTIDSDVKNVFD--FTKFGKLDIMFNNAG 65
D +E + +V +VT D+ + + + FGK+D + NNAG
Sbjct: 54 DVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAG 94
>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans,
Unliganded Structure
pdb|4GKB|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans,
Unliganded Structure
pdb|4GKB|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans,
Unliganded Structure
pdb|4GKB|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans,
Unliganded Structure
pdb|4GLO|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nad
pdb|4GLO|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nad
pdb|4GLO|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nad
pdb|4GLO|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nad
pdb|4GVX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nadp And L-Fucose
pdb|4GVX|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nadp And L-Fucose
pdb|4GVX|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nadp And L-Fucose
pdb|4GVX|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nadp And L-Fucose
Length = 258
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 19/116 (16%)
Query: 54 FGKLDIMFNNAGIISNMDRTTLDTDNE----KVKRVMIMVVFLG---VLLFTA------N 100
FG+LD + NNAG+ D LD + ++R +I + V A N
Sbjct: 81 FGRLDGLVNNAGV---NDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVN 137
Query: 101 LATET--IGEA-LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCN 153
++++T G+ Y SK A L L + V L ++ +RVN++ TP + N
Sbjct: 138 ISSKTAVTGQGNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRN 193
>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex
With Nadph And Mtx
pdb|1P33|B Chain B, Pteridine Reductase From Leishmania Tarentolae Complex
With Nadph And Mtx
pdb|1P33|C Chain C, Pteridine Reductase From Leishmania Tarentolae Complex
With Nadph And Mtx
pdb|1P33|D Chain D, Pteridine Reductase From Leishmania Tarentolae Complex
With Nadph And Mtx
Length = 289
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 113 YLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
Y M+K A+ GL ++ +EL IRVN ++ +S P
Sbjct: 195 YTMAKEALEGLTRSAALELASLQIRVNGVSPGLSVLP 231
>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE
FROM Mycobacterium Ulcerans
pdb|3TL3|B Chain B, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE
FROM Mycobacterium Ulcerans
Length = 257
Score = 31.2 bits (69), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 93 GVLLFTANLAT--ETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF 150
GV++ TA++A IG+A Y SK V+G+ + +L + IRV +IA + TP
Sbjct: 143 GVIINTASVAAFDGQIGQAAYSA--SKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPL 200
Query: 151 FCN 153
+
Sbjct: 201 LAS 203
>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate
Dehydrogenase
pdb|1WMB|B Chain B, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate
Dehydrogenase
pdb|1X1T|A Chain A, Crystal Structure Of D-3-hydroxybutyrate Dehydrogenase
From Pseudomonas Fragi Complexed With Nad+
pdb|2ZTL|A Chain A, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|B Chain B, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|C Chain C, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|D Chain D, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTV|A Chain A, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|B Chain B, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|C Chain C, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|D Chain D, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
Length = 260
Score = 31.2 bits (69), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 31/141 (21%)
Query: 53 KFGKLDIMFNNAGIISNMDRTTL--DTDNEKVKRVMIM---VVFLGVLLFTANLATETIG 107
+ G++DI+ NNAGI T L D EK ++ + VF G ++ + G
Sbjct: 80 QMGRIDILVNNAGI----QHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFG 135
Query: 108 EAL--------------YDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF--- 150
+ Y+ +K+ V+G K +E I N+I TP
Sbjct: 136 RIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEK 195
Query: 151 ----FCNAMGIDKKT-FKELL 166
G+D++T +ELL
Sbjct: 196 QISALAEKNGVDQETAARELL 216
>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (aldt) In Ligand-free Form
pdb|2DTD|B Chain B, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (aldt) In Ligand-free Form
pdb|2DTE|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With Nadh
pdb|2DTE|B Chain B, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With Nadh
pdb|2DTX|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With D-Mannose
pdb|2DTX|B Chain B, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With D-Mannose
Length = 264
Score = 31.2 bits (69), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 24/141 (17%)
Query: 34 YVCCNVTIDSDVKNVFD--FTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF 91
++ C+VT VK D F ++G + ++ NNAGI S ++ R +I V
Sbjct: 50 HIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGE---WRRIIDVNL 106
Query: 92 LGV------------------LLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQ 133
G ++ +++ I + Y+ SK+AV+GL K++ ++
Sbjct: 107 FGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP 166
Query: 134 YDIRVNSIAHIVSATPFFCNA 154
+R N++ TP A
Sbjct: 167 L-LRCNAVCPATIDTPLVRKA 186
>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma
Acidophilum Aldohexose Dehydrogenase (Aldt)
pdb|2ZK7|B Chain B, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma
Acidophilum Aldohexose Dehydrogenase (Aldt)
Length = 257
Score = 31.2 bits (69), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 24/141 (17%)
Query: 34 YVCCNVTIDSDVKNVFD--FTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF 91
++ C+VT VK D F ++G + ++ NNAGI S ++ R +I V
Sbjct: 57 HIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEW---RRIIDVNL 113
Query: 92 LGV------------------LLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQ 133
G ++ +++ I + Y+ SK+AV+GL K++ ++
Sbjct: 114 FGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP 173
Query: 134 YDIRVNSIAHIVSATPFFCNA 154
+R N++ TP A
Sbjct: 174 L-LRCNAVCPATIDTPLVRKA 193
>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|B Chain B, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|C Chain C, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|D Chain D, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|E Chain E, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|F Chain F, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|G Chain G, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|H Chain H, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
Length = 281
Score = 31.2 bits (69), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Query: 109 ALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCN-------AMGIDKKT 161
A Y+ SK+ V+GL K +L Y I VN++A TP N ++K T
Sbjct: 167 AQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPT 226
Query: 162 FK--ELLYASANLK 173
K E ++AS +L+
Sbjct: 227 LKDVESVFASLHLQ 240
>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase Rickettsia Prowazekii
pdb|3F9I|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase Rickettsia Prowazekii
Length = 249
Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 73/173 (42%), Gaps = 25/173 (14%)
Query: 7 AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGI 66
+KVII+ ++ ++L + I CN+ + N+ +K LDI+ NAGI
Sbjct: 39 SKVIISGSNEEKLKSLGNALKDNYTIE--VCNLANKEECSNLI--SKTSNLDILVCNAGI 94
Query: 67 ISNMDRTTL-DTDNEKVKRVMIMVVFL--------------GVLLFTANLATETIGEALY 111
S+ + D D +KV + + F+ G ++ +++
Sbjct: 95 TSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQA 154
Query: 112 DYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKE 164
+Y SK ++G+ K+L E+ I VN++A P F + DK K+
Sbjct: 155 NYCASKAGLIGMTKSLSYEVATRGITVNAVA------PGFIKSDMTDKLNEKQ 201
>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|B Chain B, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|C Chain C, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|D Chain D, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
Length = 266
Score = 30.4 bits (67), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 23/127 (18%)
Query: 54 FGKLDIMFNNAGIISNMDRTTLDTDNE-------------KVKRVMIMVVFLGVLLFTAN 100
G+LDI+ NNAG+IS R T TD + ++ R I + N
Sbjct: 92 LGRLDIVVNNAGVISR-GRITETTDADWSLSLGVNVEAPFRICRAAIPLXAAAGGGAIVN 150
Query: 101 LAT-----ETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAM 155
+A+ G AL Y ++K A+ L + + IR+N++ TP
Sbjct: 151 VASCWGLRPGPGHAL--YCLTKAALASLTQCXGXDHAPQGIRINAVCPNEVNTPXL--RT 206
Query: 156 GIDKKTF 162
G K+ F
Sbjct: 207 GFAKRGF 213
>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|B Chain B, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|C Chain C, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|D Chain D, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|E Chain E, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|F Chain F, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|G Chain G, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|H Chain H, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1Q7B|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|B Chain B, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|C Chain C, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|D Chain D, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
Length = 244
Score = 30.0 bits (66), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 19/153 (12%)
Query: 7 AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFD--FTKFGKLDIMFNNA 64
AKVI ++ +A+ ++ + NVT + +++V + +FG++DI+ NNA
Sbjct: 30 AKVIGTATSENGAQAISDYLGANG--KGLMLNVTDPASIESVLEKIRAEFGEVDILVNNA 87
Query: 65 GIISN--MDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATE-----TIGEAL------- 110
GI + + R + N+ ++ + V L + A + TIG +
Sbjct: 88 GITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGG 147
Query: 111 -YDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
+Y +K ++G K+L E+ I VN +A
Sbjct: 148 QANYAAAKAGLIGFSKSLAREVASRGITVNVVA 180
>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein]
Reductase Ttha0415 From Thermus Thermophilus
pdb|2PH3|B Chain B, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein]
Reductase Ttha0415 From Thermus Thermophilus
Length = 245
Score = 30.0 bits (66), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 43/108 (39%), Gaps = 23/108 (21%)
Query: 54 FGKLDIMFNNAGIISNMDRTTL-----DTDNEKVKRVMIMVVFLGV-----LLFTANLA- 102
G LD + NNAGI R TL D D E V + VF L+ A
Sbjct: 78 LGGLDTLVNNAGIT----RDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGR 133
Query: 103 ----TETIG----EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
T +G +Y+ SK ++G + + E Q I VN++A
Sbjct: 134 IVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVA 181
>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid
Dehydrogenase Type Xi
pdb|1YB1|B Chain B, Crystal Structure Of Human 17-Beta-Hydroxysteroid
Dehydrogenase Type Xi
Length = 272
Score = 30.0 bits (66), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 61/155 (39%), Gaps = 22/155 (14%)
Query: 2 FIQHRAKVIIADVQD---DLCRALCKEFDSDELISYVCCNVTID--SDVKNVFDFTKFGK 56
F + ++K+++ D+ + A CK + V C+ D S K V + G
Sbjct: 51 FAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVK--AEIGD 108
Query: 57 LDIMFNNAGIISNMDR-TTLDTDNEKVKRVMIMVVFL--------------GVLLFTANL 101
+ I+ NNAG++ D T D EK V ++ F G ++ A+
Sbjct: 109 VSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASA 168
Query: 102 ATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDI 136
A L Y SK+A +G K L EL I
Sbjct: 169 AGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQI 203
>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RSH|B Chain B, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RRO|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|3RRO|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|4I08|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
pdb|4I08|B Chain B, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
Length = 251
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 69/161 (42%), Gaps = 23/161 (14%)
Query: 1 VFIQHRAKVIIADVQDDLCRALCKEF-DSDELISYVCCNV-TIDSDVKNVFDFTKFGKLD 58
+ + AKVI + +A+ D+ + ++ N +I++ +K + D +FG +D
Sbjct: 31 LLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITD--EFGGVD 88
Query: 59 IMFNNAGIISNMDRTTLDTDNEKVKRVM----------IMVVFLGVL------LFTANLA 102
I+ NNAGI D + E+ +M V G++ +
Sbjct: 89 ILVNNAGITR--DNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSV 146
Query: 103 TETIGEA-LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
T+G A +Y +K V+G K++ E+ + VN++A
Sbjct: 147 VGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVA 187
>pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase
Type-2 From Mycobacterium Avium
pdb|3PPI|B Chain B, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase
Type-2 From Mycobacterium Avium
pdb|3PPI|C Chain C, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase
Type-2 From Mycobacterium Avium
pdb|3PPI|D Chain D, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase
Type-2 From Mycobacterium Avium
Length = 281
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 93 GVLLFTANLAT--ETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF 150
G L+ TA++A IG+ Y +K V+GL +L IRVN+IA TP
Sbjct: 167 GALVLTASIAGYEGQIGQTAY--AAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPI 224
Query: 151 F 151
Sbjct: 225 M 225
>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|B Chain B, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|C Chain C, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|D Chain D, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
Length = 271
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 17/126 (13%)
Query: 35 VCCNVTIDSDVKNVF-DFTKFG-KLDIMFNNAGIISNMDRTTLDT-DNEKVKRVMIMVVF 91
V +VT +S++ F + G +DI+ NNAGI L+T D ++V + F
Sbjct: 80 VAFDVTSESEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAF 139
Query: 92 L--------------GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIR 137
+ G ++ +L +E + Y ++K + L + + E QY I+
Sbjct: 140 MIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQ 199
Query: 138 VNSIAH 143
N+I
Sbjct: 200 ANAIGP 205
>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|E Chain E, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|F Chain F, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
Length = 251
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 69/161 (42%), Gaps = 23/161 (14%)
Query: 1 VFIQHRAKVIIADVQDDLCRALCKEF-DSDELISYVCCNV-TIDSDVKNVFDFTKFGKLD 58
+ + AKVI + +A+ D+ + ++ N +I++ +K + D +FG +D
Sbjct: 31 LLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITD--EFGGVD 88
Query: 59 IMFNNAGIISNMDRTTLDTDNEKVKRVM----------IMVVFLGVL------LFTANLA 102
I+ NNAGI D + E+ +M V G++ +
Sbjct: 89 ILVNNAGITR--DNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSV 146
Query: 103 TETIGEA-LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
T+G A +Y +K V+G K++ E+ + VN++A
Sbjct: 147 VGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVA 187
>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
Length = 270
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 15/105 (14%)
Query: 53 KFGKLDIMFNNAGIISNM-------DR--TTLDTDNEKVKRV------MIMVVFLGVLLF 97
+FG L+++ NNAGI + D +DT+ + V R+ +M G ++
Sbjct: 102 EFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVN 161
Query: 98 TANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
++ +Y +K V G+ + L E+G I VN +A
Sbjct: 162 ITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVA 206
>pdb|1W0C|A Chain A, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex.
pdb|1W0C|B Chain B, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex.
pdb|1W0C|C Chain C, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex.
pdb|1W0C|D Chain D, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex.
pdb|1W0C|E Chain E, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex.
pdb|1W0C|F Chain F, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex.
pdb|1W0C|G Chain G, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex.
pdb|1W0C|H Chain H, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex
Length = 307
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 113 YLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVS 146
Y M+K A+ GL ++ +EL IRVN + +S
Sbjct: 213 YTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS 246
>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|B Chain B, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|C Chain C, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|D Chain D, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
Length = 262
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 113 YLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
Y SK+ + GLM + EL Q+ +RV+ +A
Sbjct: 179 YTASKWGLNGLMTSAAEELRQHQVRVSLVA 208
>pdb|3OP4|A Chain A, Crystal Structure Of Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio
Cholerae O1 Biovar Eltor Str. N16961 In Complex With
Nadp+
pdb|3OP4|B Chain B, Crystal Structure Of Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio
Cholerae O1 Biovar Eltor Str. N16961 In Complex With
Nadp+
Length = 248
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 29/124 (23%)
Query: 40 TIDSDVKNVFDFTKFGKLDIMFNNAGII-------------SNMDRTTLDTD-------- 78
+I++ +K + D +FG +DI+ NNAGI S++ T L +
Sbjct: 69 SIEAVLKAITD--EFGGVDILVNNAGITRDNLLXRXKEEEWSDIXETNLTSIFRLSKAVL 126
Query: 79 NEKVKRVMIMVVFLGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV 138
K+ ++ +G ++ T A G+A +Y +K V+G K+ E+ + V
Sbjct: 127 RGXXKKRQGRIINVGSVVGTXGNA----GQA--NYAAAKAGVIGFTKSXAREVASRGVTV 180
Query: 139 NSIA 142
N++A
Sbjct: 181 NTVA 184
>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate
Dehydrogenase From Sinorhizobium Meliloti
pdb|3V2H|B Chain B, The Crystal Structure Of D-Beta-Hydroxybutyrate
Dehydrogenase From Sinorhizobium Meliloti
Length = 281
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 113 YLMSKYAVLGLMKNLCVELGQYDIRVNSI 141
Y+ +K+ + GL K + +E+ + + VNSI
Sbjct: 176 YVAAKHGIXGLTKTVALEVAESGVTVNSI 204
>pdb|1E92|A Chain A, Pteridine Reductase 1 From Leishmania Major Complexed With
Nadp+ And Dihydrobiopterin
pdb|1E92|B Chain B, Pteridine Reductase 1 From Leishmania Major Complexed With
Nadp+ And Dihydrobiopterin
pdb|1E92|C Chain C, Pteridine Reductase 1 From Leishmania Major Complexed With
Nadp+ And Dihydrobiopterin
pdb|1E92|D Chain D, Pteridine Reductase 1 From Leishmania Major Complexed With
Nadp+ And Dihydrobiopterin
pdb|2BF7|A Chain A, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Biopterin
pdb|2BF7|B Chain B, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Biopterin
pdb|2BF7|C Chain C, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Biopterin
pdb|2BF7|D Chain D, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Biopterin
pdb|2BFA|A Chain A, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Cb3717
pdb|2BFA|B Chain B, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Cb3717
pdb|2BFA|C Chain C, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Cb3717
pdb|2BFA|D Chain D, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Cb3717
pdb|2BFM|A Chain A, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Trimethoprim
pdb|2BFM|B Chain B, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Trimethoprim
pdb|2BFM|C Chain C, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Trimethoprim
pdb|2BFM|D Chain D, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Trimethoprim
pdb|2BFO|A Chain A, Leishmania Major Pteridine Reductase 1 In Complex With
Nadph
pdb|2BFO|B Chain B, Leishmania Major Pteridine Reductase 1 In Complex With
Nadph
pdb|2BFO|C Chain C, Leishmania Major Pteridine Reductase 1 In Complex With
Nadph
pdb|2BFO|D Chain D, Leishmania Major Pteridine Reductase 1 In Complex With
Nadph
pdb|2BFP|A Chain A, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Tetrahydrobiopterin
pdb|2BFP|B Chain B, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Tetrahydrobiopterin
pdb|2BFP|C Chain C, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Tetrahydrobiopterin
pdb|2BFP|D Chain D, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Tetrahydrobiopterin
pdb|3H4V|A Chain A, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
pdb|3H4V|B Chain B, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
pdb|3H4V|C Chain C, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
pdb|3H4V|D Chain D, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
pdb|3H4V|E Chain E, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
pdb|3H4V|F Chain F, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
pdb|3H4V|G Chain G, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
pdb|3H4V|H Chain H, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
Length = 288
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 113 YLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVS 146
Y M+K A+ GL ++ +EL IRVN + +S
Sbjct: 194 YTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS 227
>pdb|2QHX|A Chain A, Structure Of Pteridine Reductase From Leishmania Major
Complexed With A Ligand
pdb|2QHX|B Chain B, Structure Of Pteridine Reductase From Leishmania Major
Complexed With A Ligand
pdb|2QHX|C Chain C, Structure Of Pteridine Reductase From Leishmania Major
Complexed With A Ligand
pdb|2QHX|D Chain D, Structure Of Pteridine Reductase From Leishmania Major
Complexed With A Ligand
Length = 328
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 113 YLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVS 146
Y M+K A+ GL ++ +EL IRVN + +S
Sbjct: 234 YTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS 267
>pdb|1E7W|A Chain A, One Active Site, Two Modes Of Reduction Correlate The
Mechanism Of Leishmania Pteridine Reductase With Pterin
Metabolism And Antifolate Drug Resistance In Trpanosomes
pdb|1E7W|B Chain B, One Active Site, Two Modes Of Reduction Correlate The
Mechanism Of Leishmania Pteridine Reductase With Pterin
Metabolism And Antifolate Drug Resistance In Trpanosomes
Length = 291
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 113 YLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVS 146
Y M+K A+ GL ++ +EL IRVN + +S
Sbjct: 197 YTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS 230
>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f
Mutant In Complex With Nadph Fragment
pdb|1Q7C|B Chain B, The Structure Of Betaketoacyl-[acp] Reductase Y151f
Mutant In Complex With Nadph Fragment
Length = 244
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 7 AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFD--FTKFGKLDIMFNNA 64
AKVI ++ +A+ ++ + NVT + +++V + +FG++DI+ NNA
Sbjct: 30 AKVIGTATSENGAQAISDYLGANG--KGLMLNVTDPASIESVLEKIRAEFGEVDILVNNA 87
Query: 65 GI 66
GI
Sbjct: 88 GI 89
>pdb|2XOX|A Chain A, Crystal Structure Of Pteridine Reductase (Ptr1) From
Leishmania Donovani
pdb|2XOX|B Chain B, Crystal Structure Of Pteridine Reductase (Ptr1) From
Leishmania Donovani
Length = 288
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 113 YLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVS 146
Y M+K A+ GL ++ +EL IRVN + +S
Sbjct: 194 YTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS 227
>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase
(Saro_0793) From Novosphingobium Aromaticivorans
pdb|3IOY|B Chain B, Structure Of Putative Short-Chain Dehydrogenase
(Saro_0793) From Novosphingobium Aromaticivorans
Length = 319
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 30/160 (18%)
Query: 8 KVIIADV-QDDLCRALC---KEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMF 61
KV IAD+ QD + +AL E E++ V +V K D +FG + I+
Sbjct: 34 KVAIADIRQDSIDKALATLEAEGSGPEVMG-VQLDVASREGFKMAADEVEARFGPVSILC 92
Query: 62 NNAGI--ISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANL-----ATETIGEALYD-- 112
NNAG+ ++ ++ D D + + V + V GV F + A E G + +
Sbjct: 93 NNAGVNLFQPIEESSYD-DWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTA 151
Query: 113 -------------YLMSKYAVLGLMKNLCVELGQYDIRVN 139
Y +K+AV GL ++L L +Y+I V+
Sbjct: 152 SMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVS 191
>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|D Chain D, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|A Chain A, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|B Chain B, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|E Chain E, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|F Chain F, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|G Chain G, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|H Chain H, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
Length = 258
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 26/146 (17%)
Query: 28 SDELISYVCCNVTIDSDVKNVFD--FTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKR- 84
+D+ +V +VT ++ + D K G D++ NNAGI + L+ E +K+
Sbjct: 51 ADQKAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIA--QIKPLLEVTEEDLKQI 108
Query: 85 --VMIMVVFLGVLLFTANLATETIG-----------------EALYDYLMSKYAVLGLMK 125
V + VF G+ A+ + +G L Y +K+AV GL +
Sbjct: 109 YSVNVFSVFFGIQ--AASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQ 166
Query: 126 NLCVELGQYDIRVNSIAHIVSATPFF 151
EL VN+ A + T +
Sbjct: 167 AAAQELAPKGHTVNAYAPGIVGTGMW 192
>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver
Somniferum
Length = 311
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 13/15 (86%)
Query: 52 TKFGKLDIMFNNAGI 66
T FGKLDI+ NNAG+
Sbjct: 87 THFGKLDILVNNAGV 101
>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
pdb|3NYW|B Chain B, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
pdb|3NYW|C Chain C, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
pdb|3NYW|D Chain D, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
Length = 250
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 53/115 (46%), Gaps = 18/115 (15%)
Query: 42 DSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLL----- 96
D+++K++ K+G +DI+ N A + + + K+ + ++ + G+L
Sbjct: 75 DTEIKDIHQ--KYGAVDILVNAAAXFXDGSLSEPVDNFRKIXEINVIAQY-GILKTVTEI 131
Query: 97 -------FTANLATETIGEALYD---YLMSKYAVLGLMKNLCVELGQYDIRVNSI 141
+ N+A+ D Y +K+A+LGL ++L EL IRV ++
Sbjct: 132 XKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTL 186
>pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|B Chain B, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|C Chain C, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|D Chain D, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|E Chain E, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|F Chain F, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|G Chain G, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|H Chain H, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
Length = 257
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 93 GVLLFTANLAT--ETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
GV++ TA++A IG+A Y SK V L EL ++ IRV +IA + TP
Sbjct: 143 GVIVNTASIAAFDGQIGQAAY--AASKGGVAALTLPAARELARFGIRVVTIAPGIFDTP 199
>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
pdb|3GVC|B Chain B, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
pdb|3GVC|C Chain C, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
pdb|3GVC|D Chain D, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
Length = 277
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 21/120 (17%)
Query: 54 FGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETI---GEAL 110
FG +D + NAG++ + +DT E RV I + G L T + A I G A+
Sbjct: 101 FGGVDKLVANAGVVHLA--SLIDTTVEDFDRV-IAINLRGAWLCTKHAAPRMIERGGGAI 157
Query: 111 YD---------------YLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAM 155
+ Y MSK ++ L + EL IR N++ TP AM
Sbjct: 158 VNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAM 217
>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional
Enzyme Type 2 From Drosophila Melanogaster
Length = 613
Score = 28.1 bits (61), Expect = 2.8, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Query: 54 FGKLDIMFNNAGIISNMDRTTLDTDNE 80
FG++DI+ NNAGI+ DR+ + T +
Sbjct: 100 FGRVDILVNNAGILR--DRSLVKTSEQ 124
>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Hydroxysteroid Dehydrogenase Like 2 (Hsdl2)
pdb|3KVO|B Chain B, Crystal Structure Of The Catalytic Domain Of Human
Hydroxysteroid Dehydrogenase Like 2 (Hsdl2)
Length = 346
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 53 KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM 86
KFG +DI+ NNA IS + TLDT +++ +M
Sbjct: 126 KFGGIDILVNNASAISLTN--TLDTPTKRLDLMM 157
>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
Length = 251
Score = 27.7 bits (60), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 23/161 (14%)
Query: 1 VFIQHRAKVIIADVQDDLCRALCKEF-DSDELISYVCCNV-TIDSDVKNVFDFTKFGKLD 58
+ + AKVI + +A+ D+ + ++ N +I++ +K + D +FG +D
Sbjct: 31 LLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITD--EFGGVD 88
Query: 59 IMFNNAGIISNMDRTTLDTDNEKVKRVM----------IMVVFLGVL------LFTANLA 102
I+ NNAGI D + E+ +M V G++ +
Sbjct: 89 ILVNNAGITR--DNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSV 146
Query: 103 TETIGEA-LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
T+G A ++ +K V+G K++ E+ + VN++A
Sbjct: 147 VGTMGNAGQANFAAAKAGVIGFTKSMAREVASRGVTVNTVA 187
>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From
Oenococcus Oeni Psu-1
pdb|3KSU|B Chain B, Crystal Structure Of Short-Chain Dehydrogenase From
Oenococcus Oeni Psu-1
Length = 262
Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 64/166 (38%), Gaps = 28/166 (16%)
Query: 5 HRAKVIIADVQDDLCRALCKEF-DSDELISYVCCNVTIDSDVKNVFDFTK--FGKLDIMF 61
H+AK D L E D ++ +++ + +V +FDF + FGK+DI
Sbjct: 43 HQAK------DSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAI 96
Query: 62 NNAGII--------SNMDRTTLDTDNEKVKRVMIMVVFLG-------VLLFTANLATETI 106
N G + S + +DT N KV I + + T+ LA T
Sbjct: 97 NTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYT- 155
Query: 107 GEALYD-YLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF 151
Y Y +K V + EL + I VN+IA T FF
Sbjct: 156 --GFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFF 199
>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|B Chain B, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|C Chain C, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|D Chain D, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
Length = 244
Score = 27.3 bits (59), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 56/135 (41%), Gaps = 23/135 (17%)
Query: 40 TIDSDVKNVFDF--------TKFGKLDIMFNNAGI-----ISNMDRTTLD-TDNEKVKRV 85
TI +D+ ++ D ++G +D + NNAG+ +S++ D T N +K
Sbjct: 62 TITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGT 121
Query: 86 MIMVVFL---------GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDI 136
+ L G + F ++A Y MSK+ GL++ + + + ++
Sbjct: 122 FFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNV 181
Query: 137 RVNSIAHIVSATPFF 151
R+ + TP +
Sbjct: 182 RITDVQPGAVYTPMW 196
>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|A Chain A, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|B Chain B, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|C Chain C, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
Length = 255
Score = 27.3 bits (59), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 16/102 (15%)
Query: 57 LDIMFNNAGIISNMDRTTLDTDN-EKVKRVMIMVVFL---------------GVLLFTAN 100
+DI+ NNAGI L+ +N +KV + FL G ++ +
Sbjct: 87 VDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGS 146
Query: 101 LATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
L ++ + Y +K + L ++ E Q++I+ N+I
Sbjct: 147 LTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIG 188
>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
pdb|3R3S|B Chain B, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
pdb|3R3S|C Chain C, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
pdb|3R3S|D Chain D, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
Length = 294
Score = 26.9 bits (58), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 95 LLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFC 152
++ T+++ L DY +K A+L + L ++ + IRVN IV+ P +
Sbjct: 181 IITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVN----IVAPGPIWT 234
>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL
Dehydrogenase From Clostridium Thermocellum
Length = 247
Score = 26.6 bits (57), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 27/130 (20%)
Query: 39 VTIDSDVKNVFDFTK--------FGKLDIMFNNAGIISN---MDRTTLDTDN-------- 79
V DVKN D FG++DI+ NNAGI + + + D D+
Sbjct: 58 VVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKS 117
Query: 80 -----EKVKRVMIMVVFLGVLLFTANLATETIGEA-LYDYLMSKYAVLGLMKNLCVELGQ 133
+ V ++M+ ++ T+ IG A +Y SK ++G K++ E
Sbjct: 118 AYLCTKAVSKIMLKQKSGKIINITS--IAGIIGNAGQANYAASKAGLIGFTKSIAKEFAA 175
Query: 134 YDIRVNSIAH 143
I N++A
Sbjct: 176 KGIYCNAVAP 185
>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
pdb|3TZK|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
Length = 251
Score = 26.6 bits (57), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 68/161 (42%), Gaps = 23/161 (14%)
Query: 1 VFIQHRAKVIIADVQDDLCRALCKEF-DSDELISYVCCNV-TIDSDVKNVFDFTKFGKLD 58
+ + AKVI + +A+ D+ + ++ N +I++ +K + D +FG +D
Sbjct: 31 LLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITD--EFGGVD 88
Query: 59 IMFNNAGIISNMDRTTLDTDNEKVKRVM----------IMVVFLGVL------LFTANLA 102
I+ NNA I D + E+ +M V G++ +
Sbjct: 89 ILVNNAAITR--DNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSV 146
Query: 103 TETIGEA-LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
T+G A +Y +K V+G K++ E+ + VN++A
Sbjct: 147 VGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVA 187
>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme,
Phosphate And Hydroxide
Length = 244
Score = 26.6 bits (57), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Query: 55 GKLDIMFNNAGI-----ISNMDRTTLDTDNEKVKRVMIMV--------VFLGVLLFTANL 101
G +D++ NNA + + + D E R +I V + GV N+
Sbjct: 75 GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNV 134
Query: 102 ATETIGEALYD---YLMSKYAVLGLMKNLCVELGQYDIRVNSI 141
+++ A+ + Y +K A+ L K + +ELG + IRVN++
Sbjct: 135 SSQXSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAV 177
>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And An Active Site Inhibitor
pdb|1YBV|B Chain B, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And An Active Site Inhibitor
Length = 283
Score = 26.6 bits (57), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 35 VCCNVTIDSDVKNVFD--FTKFGKLDIMFNNAGIIS 68
V NV + D+ +F+ FGKLDI+ +N+G++S
Sbjct: 84 VKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS 119
>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And 4-nitro-inden-1-one
pdb|1DOH|B Chain B, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And 4-nitro-inden-1-one
pdb|1G0N|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And 4,5,6,7-Tetrachloro-Phthalide
pdb|1G0N|B Chain B, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And 4,5,6,7-Tetrachloro-Phthalide
pdb|1G0O|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And Pyroquilon
pdb|1G0O|B Chain B, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And Pyroquilon
pdb|1G0O|C Chain C, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And Pyroquilon
pdb|1G0O|D Chain D, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And Pyroquilon
Length = 283
Score = 26.6 bits (57), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 35 VCCNVTIDSDVKNVFD--FTKFGKLDIMFNNAGIIS 68
V NV + D+ +F+ FGKLDI+ +N+G++S
Sbjct: 84 VKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS 119
>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|B Chain B, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|C Chain C, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|D Chain D, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
Length = 246
Score = 26.2 bits (56), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 15/105 (14%)
Query: 53 KFGKLDIMFNNAGIISNMDRTTL-DTDNEKVKRVMIMVVF--------------LGVLLF 97
+ G +DI+ NNAGI + + D D + V V + VF G ++
Sbjct: 78 EMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVFNLTRELTHPMMRRRNGRIIN 137
Query: 98 TANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
++ T +Y SK ++G K+L E+ ++ VN IA
Sbjct: 138 ITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVNCIA 182
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.326 0.140 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,650,935
Number of Sequences: 62578
Number of extensions: 173980
Number of successful extensions: 901
Number of sequences better than 100.0: 177
Number of HSP's better than 100.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 99
Number of HSP's that attempted gapping in prelim test: 712
Number of HSP's gapped (non-prelim): 204
length of query: 181
length of database: 14,973,337
effective HSP length: 93
effective length of query: 88
effective length of database: 9,153,583
effective search space: 805515304
effective search space used: 805515304
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 48 (23.1 bits)