Query 042201
Match_columns 511
No_of_seqs 158 out of 1104
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 06:08:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042201.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042201hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ia6_A Cellulase CEL9M; cellul 100.0 8E-112 3E-116 898.7 33.0 420 37-497 2-431 (441)
2 2xfg_A Endoglucanase 1; hydrol 100.0 6E-112 2E-116 902.8 31.0 431 35-497 20-464 (466)
3 1ks8_A Endo-B-1,4-glucanase; c 100.0 1E-111 4E-116 896.3 27.8 422 39-495 3-431 (433)
4 1tf4_A T. fusca endo/EXO-cellu 100.0 2E-110 7E-115 917.4 31.1 428 37-495 2-443 (605)
5 2yik_A Endoglucanase; hydrolas 100.0 6E-111 2E-115 922.6 25.2 464 1-496 1-516 (611)
6 1g87_A Endocellulase 9G; endog 100.0 9E-109 3E-113 905.0 32.4 426 38-495 3-439 (614)
7 3gzk_A Cellulase; fold from GH 100.0 4.6E-98 2E-102 810.0 24.3 411 35-497 82-536 (537)
8 1clc_A Endoglucanase CELD; EC: 100.0 7.7E-97 3E-101 815.1 30.4 409 35-496 123-565 (639)
9 1ut9_A Cellulose 1,4-beta-cell 100.0 1.3E-95 5E-100 802.6 27.0 431 36-495 96-607 (609)
10 3h7l_A Endoglucanase; dehydrog 100.0 1.3E-65 4.6E-70 554.7 18.3 388 36-491 91-563 (586)
11 3gt5_A N-acetylglucosamine 2-e 95.8 0.032 1.1E-06 57.7 10.3 141 95-270 48-200 (402)
12 2gz6_A N-acetyl-D-glucosamine 95.7 1.3 4.4E-05 44.9 21.5 110 136-271 21-143 (388)
13 2gz6_A N-acetyl-D-glucosamine 95.6 0.057 1.9E-06 55.1 10.7 120 124-271 71-200 (388)
14 3k7x_A LIN0763 protein; Q92DQ0 95.5 0.19 6.4E-06 51.1 14.2 118 124-271 109-241 (349)
15 3gt5_A N-acetylglucosamine 2-e 93.2 0.15 5.2E-06 52.6 7.6 117 128-271 11-140 (402)
16 2zzr_A Unsaturated glucuronyl 93.0 0.39 1.3E-05 49.7 10.2 122 124-271 131-274 (397)
17 2ahf_A Unsaturated glucuronyl 91.8 0.66 2.2E-05 47.6 10.0 121 126-271 107-249 (377)
18 1fp3_A N-acyl-D-glucosamine 2- 90.4 0.84 2.9E-05 46.6 9.3 118 128-271 15-150 (402)
19 3k11_A Putative glycosyl hydro 88.5 3.5 0.00012 43.1 12.3 113 122-261 286-416 (445)
20 1nc5_A Hypothetical protein YT 88.2 4.2 0.00014 41.2 12.5 57 212-270 107-170 (373)
21 3k7x_A LIN0763 protein; Q92DQ0 87.8 1.4 4.7E-05 44.6 8.5 66 191-270 51-119 (349)
22 1fp3_A N-acyl-D-glucosamine 2- 85.8 1.5 5.2E-05 44.7 7.6 82 182-271 245-342 (402)
23 3pmm_A Putative cytoplasmic pr 85.1 28 0.00097 35.3 16.8 110 126-270 25-137 (382)
24 2zbl_A Putative isomerase; N-a 80.3 2.9 0.0001 43.1 7.2 113 128-270 13-137 (421)
25 3k11_A Putative glycosyl hydro 80.0 33 0.0011 35.6 15.1 192 33-271 24-232 (445)
26 2zbl_A Putative isomerase; N-a 76.5 11 0.00036 38.8 10.0 118 124-270 67-199 (421)
27 3e6u_A LANC-like protein 1; al 69.9 14 0.00048 37.9 9.0 115 123-271 247-363 (411)
28 2ahf_A Unsaturated glucuronyl 66.0 61 0.0021 32.8 12.7 140 105-271 154-313 (377)
29 3pmm_A Putative cytoplasmic pr 64.9 19 0.00064 36.6 8.6 77 123-227 256-332 (382)
30 2zzr_A Unsaturated glucuronyl 64.4 35 0.0012 34.9 10.6 141 104-271 178-338 (397)
31 2p0v_A Hypothetical protein BT 58.9 36 0.0012 35.7 9.5 93 127-227 205-319 (489)
32 1nc5_A Hypothetical protein YT 55.2 30 0.001 34.8 8.1 79 123-226 234-313 (373)
33 1gxm_A Pectate lyase; mechanis 51.8 88 0.003 31.1 10.6 84 125-227 92-181 (332)
34 1w6k_A Lanosterol synthase; cy 51.0 2.8E+02 0.0097 30.4 18.0 92 129-228 480-571 (732)
35 1r76_A Pectate lyase; A-helica 44.3 84 0.0029 32.2 9.3 86 125-228 170-258 (408)
36 2kmg_A KLCA; ARDB, spectroscop 38.4 19 0.00064 31.5 2.9 87 137-229 40-133 (142)
37 2v8i_A Pectate lyase; periplas 32.0 27 0.00094 36.4 3.3 24 248-271 431-454 (543)
38 2wj9_A ARDB, intergenic-region 29.8 83 0.0028 28.5 5.8 86 136-229 78-172 (181)
No 1
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=100.00 E-value=7.5e-112 Score=898.66 Aligned_cols=420 Identities=33% Similarity=0.621 Sum_probs=379.6
Q ss_pred chHHHHHHHHHHHHHHHHhhcCCCCC-CCCCCccCCCCCCCCCCCccccccceecCCCCcccccchHHHHHHHHHHHHHc
Q 042201 37 TTFAYRDALGKAILFFEGQRSGKLPE-SQRVKWRGNSALSDGKPENVNLIGGYYDAGDNVKFGWPMAYSVSLLSWAAVEY 115 (511)
Q Consensus 37 ~~~~Y~~~l~~sl~fy~~QR~G~lp~-~~~~~w~~~s~~~Dg~~~~~DlsGGWyDAGD~~Ky~~~~a~s~~~L~~~~~e~ 115 (511)
+.++|.++|++||+||++||||++|+ .++++||++||+.||.+.++||+|||||||||+||++|+++|+++|+|+++||
T Consensus 2 ~~~~Y~~al~~sl~ff~~QRsG~~~~~~~~~~wr~~shl~Dg~~~~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~ 81 (441)
T 1ia6_A 2 GTHDYSTALKDSIIFFDANKCGPQAGENNVFDWRGACHTTDGSDVGVDLTGGYHDAGDHVKFGLPQGYSAAILGWSLYEF 81 (441)
T ss_dssp CCCCHHHHHHHHHHGGGGGBCBTTTTTTCSCTTCCCBCTTTTTTTTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHC
T ss_pred ccchHHHHHHHHHHHHHHHcCCCCCCcccCCCCCCCCCccccCCCcccCCCCeeeCCCCCeeccchHHHHHHHHHHHHHh
Confidence 45789999999999999999999887 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccchhHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCCCCCCCCCCCCCCCCceE-EEeCCCCcchHHHHHHHHH
Q 042201 116 QREISSVNQLGYLRGAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTL-YRITSDSPGSEAAAESAAA 194 (511)
Q Consensus 116 ~~~~~s~n~~pdiLdE~kwg~D~llkm~~~~g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~~-~~~~~~~p~s~~a~~~AAa 194 (511)
++.|++.+++||||||||||+|||||||+++|.||+|||++..||.+|++||+++.+|++ |.++.++|+|++++++|||
T Consensus 82 ~~~~~~~g~~~d~ldeikwg~D~llk~~~~~~~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~~y~~~~~~p~sd~a~~~AAa 161 (441)
T 1ia6_A 82 KESFDATGNTTKMLQQLKYFTDYFLKSHPNSTTFYYQVGEGNADHTYWGAPEEQTGQRPSLYKADPSSPASDILSETSAA 161 (441)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTCCSTTCEEEEESCHHHHTTCCSCGGGCCSCCCCCEEEBTTBCCHHHHHHHHHH
T ss_pred HHHHhhcCcHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCccccccCChhhCCCCCceeeEeCCCCCccHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHhccccccCCHHHHHHHHHHHHHHHHHHHhcCCCccCCCCccCCCCcchhHHHHHHHHHHHHcCChhHHHHHHHccCC
Q 042201 195 LAAASIVFKKVDSIYSSRLLNHSKSLFEFADKHRGSYQASCPFYCSYSGYQDELLWAAAWLYKASEDNKYLDYVLSNQGW 274 (511)
Q Consensus 195 lA~as~vfk~~D~~yA~~~l~~A~~a~~~a~~~~~~y~~~~~~Y~s~~~~~De~~wAAaeLy~aTg~~~Yl~~a~~~~~~ 274 (511)
||+||||||++||+||++||++||++|+||++||+.+. .+++|++ +++.||++|||+|||++||+++|+++++++...
T Consensus 162 lAaas~vfk~~D~~yA~~~L~~A~~~~~fa~~~~g~~~-~~~~Y~s-s~~~DE~~WAAa~Ly~aTgd~~Yl~~a~~~~~~ 239 (441)
T 1ia6_A 162 LTLMYLNYKNIDSAYATKCLNAAKELYAMGKANQGVGN-GQSFYQA-TSFGDDLAWAATWLYTATNDSTYITDAEQFITL 239 (441)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCSCCC-CTTTSCC-CCSHHHHHHHHHHHHHHHCCTHHHHHHHHHTTC
T ss_pred HHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCC-CCCCCCC-CCchhHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999998765 5789999 999999999999999999999999999886421
Q ss_pred C--------CCCcccCcChhhHHHHhhccccccCCchHHHHHHHHHHHHHHhhcCCCCCcccccCCCCceeecCCChHHH
Q 042201 275 S--------QVASEFSWDNKFAGAQMLLAKEFFGGNKQLSLFKIHVESFVCALMPESSSVRIETTPGGLLYIRDSSNLQY 346 (511)
Q Consensus 275 ~--------~~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~t~~g~~w~~~w~n~~~ 346 (511)
. .....|+||++..++++||++. .++ +.+++.++.+++.++ .+++++|+|+.|...||++++
T Consensus 240 ~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~--~~~---~~~~~~~~~~~~~~~-----~~~~~tp~Gl~~~~~WGs~~~ 309 (441)
T 1ia6_A 240 GNTMNENKMQDKWTMCWDDMYVPAALRLAQI--TGK---QIYKDAIEFNFNYWK-----TQVTTTPGGLKWLSNWGVLRY 309 (441)
T ss_dssp ------CGGGCSSCSSSSCCHHHHHHHHHHH--HCC---HHHHHHHHHHHHHHH-----HTSCBCTTSCBCCCSTTHHHH
T ss_pred hhhcccccccCCCcCCccchHHHHHHHHHhc--cCc---HHHHHHHHHHHHHHH-----hhcccCCCCceecCCcchHHH
Confidence 1 1346789999999999888764 222 234444444443333 156789999998889999999
Q ss_pred HHHHHHHHHHHHHHhhhcccCccccCCCCCCHHHHHHHHHhccchhccCCCCCcceEeecCCCCCCCccccCCCCCCCCC
Q 042201 347 VTSATLLLFLYSKTLNTAHINGLQCGSAHFSASQISAFAKSQVDYILGKNPMKMSYMAGFGSKFPLQIHHRGASIPSIGA 426 (511)
Q Consensus 347 a~n~a~l~~~ya~~l~~~~~~~~~~g~~~~~~~~y~~~a~~qldYlLG~Np~~~SyVtG~G~~~p~~phHR~ss~~~~~~ 426 (511)
++|++||+++|++++ .+++|+++|++|||||||+||+++|||||||+|+|++||||+++||.
T Consensus 310 ~~~~a~l~~~~~~~~---------------~~~~y~~~A~~qldYiLG~NP~~~SyvvG~G~~~p~~pHHR~s~~~~--- 371 (441)
T 1ia6_A 310 AAAESMVMLVYCKQN---------------PDQSLLDLAKKQVDYILGDNPANMSYIIGYGSNWCIHPHHRAANGYT--- 371 (441)
T ss_dssp HHHHHHHHHHHHHHS---------------CCHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCBCHHHHCCC---
T ss_pred HHHHHHHHHHHHhhc---------------CHHHHHHHHHHHHHHhcCCCCCCceeEEecCCCCCCCCcChhhccCC---
Confidence 999999999998863 24689999999999999999999999999999999999999998864
Q ss_pred CCCccccCCCCccccCCCCCCCCCcccceecCCCCCCCcccCcCccccCcccccCchHHHHHHhHhhccCC
Q 042201 427 HPAKVSCNDGYSSYYHSSNPNPNVHVGAIVGGPDSNDQFKDLRTDYSHAEPTTYMNAAFVGSVAPLLAQSE 497 (511)
Q Consensus 427 ~p~~~~c~~g~~~~~~~~~pn~~~~~GalvGGPn~~~~y~D~~~~y~~nEvaid~NA~~v~~la~l~~~~~ 497 (511)
+ +.++.|.|||++|+|+||||||..|+|.|+|++|++|||||||||+||++||+|....+
T Consensus 372 -~----------~~~~~p~p~~~~l~GalvGGP~~~d~y~D~~~~y~~nEvai~~NA~~v~~la~l~~~~~ 431 (441)
T 1ia6_A 372 -Y----------ANGDNAKPAKHLLTGALVGGPDQNDKFLDDANQYQYTEVALDYNAGLVGVLAGAIKFFG 431 (441)
T ss_dssp -C----------C--CTTSCCSSCCTTCBCCCCCTTSCCCCSTTCHHHHBCCHHHHHHHHHHHHHHHHHTC
T ss_pred -c----------cccCCCCCCcccCccceeeCCCCCcCcCcccccccccccchhhhHHHHHHHHHHHHhcC
Confidence 1 13678999999999999999999999999999999999999999999999999988765
No 2
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum}
Probab=100.00 E-value=6.4e-112 Score=902.77 Aligned_cols=431 Identities=39% Similarity=0.657 Sum_probs=386.9
Q ss_pred CCchHHHHHHHHHHHHHHHHhhcCCC-CCCCCCCccCCCCCCCCCCCccccccceecCCCCcccccchHHHHHHHHHHHH
Q 042201 35 STTTFAYRDALGKAILFFEGQRSGKL-PESQRVKWRGNSALSDGKPENVNLIGGYYDAGDNVKFGWPMAYSVSLLSWAAV 113 (511)
Q Consensus 35 ~~~~~~Y~~~l~~sl~fy~~QR~G~l-p~~~~~~w~~~s~~~Dg~~~~~DlsGGWyDAGD~~Ky~~~~a~s~~~L~~~~~ 113 (511)
+.+.++|.++|++||+||++||||++ |+.++++||++||+.|+.+.++||+|||||||||+||++|+++|+++|+|+++
T Consensus 20 ~~~~~~Y~~~l~~sl~ff~~QRsG~~vp~~~~~~Wr~~shl~Dg~~~~~DlsGGwyDAGD~~Ky~~~~a~t~~~L~w~~~ 99 (466)
T 2xfg_A 20 ATGAFNYGEALQKAIFFYECQRSGKLDSSTLRLNWRGDSGLDDGKDAGIDLTGGWYDAGDHVKFNLPMSYSAAMLGWAVY 99 (466)
T ss_dssp -CCSSCHHHHHHHHHHHHHHTBCBCCCTTTCSBSSCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcccccccccccCCCCceeCCCCCeeccccHHHHHHHHHHHH
Confidence 45678999999999999999999998 99999999999999999999999999999999999999999999999999999
Q ss_pred HcHHHHhcccchhHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCCCCCCCCCCCCCCCCceEEEeCCCCcchHHHHHHHH
Q 042201 114 EYQREISSVNQLGYLRGAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAA 193 (511)
Q Consensus 114 e~~~~~~s~n~~pdiLdE~kwg~D~llkm~~~~g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AA 193 (511)
||++.|+++|++||||||||||+|||||||+++|.||+|||++..||.+|++||+++.+|++|.++.++|+|++++++||
T Consensus 100 e~~~~~~~~~~~~d~ldeikwg~D~llk~~~~~~~~y~qVgd~~~Dh~~W~~pe~~~~~R~~y~i~~~~pgsd~a~e~AA 179 (466)
T 2xfg_A 100 EYEDAFKQSGQYNHILNNIKWACDYFIKCHPEKDVYYYQVGDGHADHAWWGPAEVMPMERPSYKVDRSSPGSTVVAETSA 179 (466)
T ss_dssp HCHHHHHHTTCHHHHHHHHHHHHHHHHHTCSBTTEEEEEESCHHHHHTCCSCGGGCCSCCCEEEEESSSCCHHHHHHHHH
T ss_pred HhHHHHhcCCCchHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCccccccCCcccCCCCCceeEecCCCCccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccccCCHHHHHHHHHHHHHHHHHHHhcCCCccC--CCCccCCCCcchhHHHHHHHHHHHHcCChhHHHHHHHc
Q 042201 194 ALAAASIVFKKVDSIYSSRLLNHSKSLFEFADKHRGSYQA--SCPFYCSYSGYQDELLWAAAWLYKASEDNKYLDYVLSN 271 (511)
Q Consensus 194 alA~as~vfk~~D~~yA~~~l~~A~~a~~~a~~~~~~y~~--~~~~Y~s~~~~~De~~wAAaeLy~aTg~~~Yl~~a~~~ 271 (511)
|||+||||||++||+||++||++||++|+||+++|+.|.. .+++|+|++++.||++|||+|||++||+++|+++++++
T Consensus 180 AlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~~~~~~~~Y~s~s~~~DEl~WAAawLy~ATgd~~Yl~~a~~~ 259 (466)
T 2xfg_A 180 ALAIASIIFKKVDGEYSKECLKHAKELFEFADTTKSDDGYTAANGFYNSWSGFYDELSWAAVWLYLATNDSSYLDKAESY 259 (466)
T ss_dssp HHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHCCCTTCCTTTTTSCCSSCSHHHHHHHHHHHHHHHCCHHHHHHHHHT
T ss_pred HHHHHHHhccccCHHHHHHHHHHHHHHHHHHHhcCCcCCCCccccccCCCCCCchHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999998754 67899998899999999999999999999999999986
Q ss_pred cCCC---------CCCcccCcChhhHHHHhhccccccCCch-H-HHHHHHHHHHHHHhhcCCCCCcccccCCCCceeecC
Q 042201 272 QGWS---------QVASEFSWDNKFAGAQMLLAKEFFGGNK-Q-LSLFKIHVESFVCALMPESSSVRIETTPGGLLYIRD 340 (511)
Q Consensus 272 ~~~~---------~~~~~~~Wd~~~~g~~~lla~~~~~~~~-~-~~~~~~~ad~~~~~~~~~~~~~~~~~t~~g~~w~~~ 340 (511)
.... ...+.|+||++..++++||++.. ++. + ++.++..++.++| +.+..++++||+|+.|...
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~--~~~~~~~~~~~~~~~~~~~----~~~~~~~~~tp~Gl~~~~~ 333 (466)
T 2xfg_A 260 SDKWGYEPQTNIPKYKWAQCWDDVTYGTYLLLARIK--NDNGKYKEAIERHLDWWTT----GYNGERITYTPKGLAWLDQ 333 (466)
T ss_dssp TTTSCBSTTSSSBCCSSCCBTTBCHHHHHHHHHHHH--CSSCHHHHHHHHHHHHHTT----CBTTBCCCBCTTSCBCCCS
T ss_pred HHHhccccccccccccCcCCcchhHHHHHHHHHHhc--CCcHHHHHHHHHHHHHHHh----ccCCCccccCCccccccCC
Confidence 5221 12357999999999999888652 222 3 4555556665543 2232378899999999999
Q ss_pred CChHHHHHHHHHHHHHHHHHhhhcccCccccCCCCCCHHHHHHHHHhccchhccCCCCCcceEeecCCCCCCCccccCCC
Q 042201 341 SSNLQYVTSATLLLFLYSKTLNTAHINGLQCGSAHFSASQISAFAKSQVDYILGKNPMKMSYMAGFGSKFPLQIHHRGAS 420 (511)
Q Consensus 341 w~n~~~a~n~a~l~~~ya~~l~~~~~~~~~~g~~~~~~~~y~~~a~~qldYlLG~Np~~~SyVtG~G~~~p~~phHR~ss 420 (511)
||++++++|++||+++|++++. |+ ..++.+|+++|++|||||||+| ++|||||||+|+|++||||+++
T Consensus 334 Wgs~~~~~n~afl~~~y~~~~~--------~~--~~~~~~y~~~A~~qidYiLG~N--~~SyvvG~G~~~p~~pHHR~ss 401 (466)
T 2xfg_A 334 WGSLRYATTTAFLACVYSDWEN--------GD--KEKAKTYLEFARSQADYALGST--GRSFVVGFGENPPKRPHHRTAH 401 (466)
T ss_dssp SSHHHHHHHHHHHHHHHHTCTT--------SC--HHHHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCCSCCSCHHHH
T ss_pred CCchHHHHHHHHHHHHHHHhcC--------CC--cccHHHHHHHHHHhHHhhcCCC--CcceEeccCCCCCCCCcCchhc
Confidence 9999999999999999988642 22 1246899999999999999999 9999999999999999999998
Q ss_pred CCCCCCCCCccccCCCCccccCCCCCCCCCcccceecCCCCCCCcccCcCccccCcccccCchHHHHHHhHhhccCC
Q 042201 421 IPSIGAHPAKVSCNDGYSSYYHSSNPNPNVHVGAIVGGPDSNDQFKDLRTDYSHAEPTTYMNAAFVGSVAPLLAQSE 497 (511)
Q Consensus 421 ~~~~~~~p~~~~c~~g~~~~~~~~~pn~~~~~GalvGGPn~~~~y~D~~~~y~~nEvaid~NA~~v~~la~l~~~~~ 497 (511)
||. .+.++.|.|||++|+|+||||||..|+|.|+|.+|++||||||||||||++||+|....+
T Consensus 402 ~~~--------------~~~~~~p~p~~~vl~GaLVGGP~~~D~y~D~~~~y~~nEvaid~NA~~v~~la~l~~~~g 464 (466)
T 2xfg_A 402 GSW--------------ADSQMEPPEHRHVLYGALVGGPDSTDNYTDDISNYTCNEVACDYNAGFVGLLAKMYKLYG 464 (466)
T ss_dssp TCS--------------SSCTTSSSSCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHHHHHHHHHHHHHHHHHT
T ss_pred cCc--------------cccccCCCCCCCCCccceeeCCCCccCcCcccccccccccchhhhHHHHHHHHHHHHHcC
Confidence 854 113668899999999999999999999999999999999999999999999999987643
No 3
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=100.00 E-value=1e-111 Score=896.29 Aligned_cols=422 Identities=45% Similarity=0.803 Sum_probs=383.1
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCccCCCCCCCCCCCccccccceecCCCCcccccchHHHHHHHHHHHHHcHHH
Q 042201 39 FAYRDALGKAILFFEGQRSGKLPESQRVKWRGNSALSDGKPENVNLIGGYYDAGDNVKFGWPMAYSVSLLSWAAVEYQRE 118 (511)
Q Consensus 39 ~~Y~~~l~~sl~fy~~QR~G~lp~~~~~~w~~~s~~~Dg~~~~~DlsGGWyDAGD~~Ky~~~~a~s~~~L~~~~~e~~~~ 118 (511)
.+|.++|++||+||++||||++|++++++||++||+.||++.++||+|||||||||+||++|+++|+++|+|+++||++.
T Consensus 3 ~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~wr~ds~l~Dg~~~~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~~~ 82 (433)
T 1ks8_A 3 YDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKFGFPMAYTATVLAWGLIDFEAG 82 (433)
T ss_dssp CCHHHHHHHHHHHHHHTBCBSCCTTCSCTTCCCBCTTCBCTTCCBCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHTHHH
T ss_pred CcHHHHHHHHHHHHHHHcCCCCCcccCCCcCCcccccCCCcCcccCCCceeECCCCCeeccchHHHHHHHHHHHHHhHHh
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcccchhHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCCCCCCCCCCCCCCCCceEEEeCCCCcchHHHHHHHHHHHHh
Q 042201 119 ISSVNQLGYLRGAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALAAA 198 (511)
Q Consensus 119 ~~s~n~~pdiLdE~kwg~D~llkm~~~~g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~a 198 (511)
|+++|++||||||||||+|||||||+++|.||+|||++..||.+|++||+++.+|++|.|+.++|||++++++|||||+|
T Consensus 83 ~~~~~~~~d~ldeikwg~D~llk~~~~~g~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~a~~~AAalA~a 162 (433)
T 1ks8_A 83 YSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQGDADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAA 162 (433)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHCCBTTBEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHHHHH
T ss_pred hhcCCchHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCcCCcccCCHhhCCCCCceeeccCCCCccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998899999999999999999
Q ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHhcCCCccC----CCCccCCCCcchhHHHHHHHHHHHHcCChhHHHHHHHcc--
Q 042201 199 SIVFKKVDSIYSSRLLNHSKSLFEFADKHRGSYQA----SCPFYCSYSGYQDELLWAAAWLYKASEDNKYLDYVLSNQ-- 272 (511)
Q Consensus 199 s~vfk~~D~~yA~~~l~~A~~a~~~a~~~~~~y~~----~~~~Y~s~~~~~De~~wAAaeLy~aTg~~~Yl~~a~~~~-- 272 (511)
|||||++||+||++||++||++|+||++||+.|.+ .+++|+| +++.||++|||+|||++||+++|+++++++.
T Consensus 163 s~vfk~~D~~yA~~~L~~A~~~~~fa~~~~~~y~~~~~~~~~~Y~s-s~~~DE~~WAAa~Ly~aTgd~~Yl~~~~~~~~~ 241 (433)
T 1ks8_A 163 SIVFRNVDGTYSNNLLTHARQLFDFANNYRGKYSDSITDARNFYAS-ADYRDELVWAAAWLYRATNDNTYLNTAESLYDE 241 (433)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHHHHHHHHSCCCHHHHSGGGGGTSCC-CCTHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHhccccCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCcCCCCCCC-CCcccHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999998864 4689999 9999999999999999999999999998864
Q ss_pred -CCCCCCcccCcChhhHHHHhhccccccCCchHHHHHHHHHHHHHHhhcCCCCCcccccCCCCceeecCCChHHHHHHHH
Q 042201 273 -GWSQVASEFSWDNKFAGAQMLLAKEFFGGNKQLSLFKIHVESFVCALMPESSSVRIETTPGGLLYIRDSSNLQYVTSAT 351 (511)
Q Consensus 273 -~~~~~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~t~~g~~w~~~w~n~~~a~n~a 351 (511)
+.......|+|+++..+++++|++.. . .+.+++.++.++|.++. .+.+||+|+.|...||++++++|.+
T Consensus 242 ~~~~~~~~~~~Wd~~~~g~~~lla~~~--~---~~~~~~~~~~~~~~~~~-----~~~~tp~Gl~~~~~WGs~~~~~n~a 311 (433)
T 1ks8_A 242 FGLQNWGGGLNWDSKVSGVQVLLAKLT--N---KQAYKDTVQSYVNYLIN-----NQQKTPKGLLYIDMWGTLRHAANAA 311 (433)
T ss_dssp TTGGGSCCCCCSSCCHHHHHHHHHHHH--C---CHHHHHHHHHHHHHHHH-----TSCBCTTSCBCCCSTTHHHHHHHHH
T ss_pred cCcCcCcCCcCccchhhHHHHHHhhcc--C---hHHHHHHHHHHHHHHHh-----cCCcCCCCceeecCCchhHHHHHHH
Confidence 11233468999999999998887642 2 23455555555555442 3456899999888899999999999
Q ss_pred HHHHHHHHHhhhcccCccccCCCCCCHHHHHHHHHhccchhccCCCCCcceEeecCCCCCCCccccCCCCCCCCCCCCcc
Q 042201 352 LLLFLYSKTLNTAHINGLQCGSAHFSASQISAFAKSQVDYILGKNPMKMSYMAGFGSKFPLQIHHRGASIPSIGAHPAKV 431 (511)
Q Consensus 352 ~l~~~ya~~l~~~~~~~~~~g~~~~~~~~y~~~a~~qldYlLG~Np~~~SyVtG~G~~~p~~phHR~ss~~~~~~~p~~~ 431 (511)
|++++++++- ..+.+|+++|++|||||||+| ++|||||||+|+|++||||+++||.. | .
T Consensus 312 ~l~~~~~~~~--------------~~~~~y~~~A~~qldYiLG~n--~~SyvvG~G~~~p~~pHHR~s~~~~~---~--~ 370 (433)
T 1ks8_A 312 FIMLEAAELG--------------LSASSYRQFAQTQIDYALGDG--GRSFVCGFGSNPPTRPHHRSSSCPPA---P--A 370 (433)
T ss_dssp HHHHHHHHTT--------------SSHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCCSCCSCHHHHCCCT---T--S
T ss_pred HHHHHHHhcC--------------CCHHHHHHHHHHhHhhccCCC--CcceEeccCCCCCCCCcchhhcCCCc---c--c
Confidence 9999987651 246799999999999999998 78999999999999999999999762 2 4
Q ss_pred ccCCCCccccCCCCCCCCCcccceecCCCCCCCcccCcCccccCcccccCchHHHHHHhHhhcc
Q 042201 432 SCNDGYSSYYHSSNPNPNVHVGAIVGGPDSNDQFKDLRTDYSHAEPTTYMNAAFVGSVAPLLAQ 495 (511)
Q Consensus 432 ~c~~g~~~~~~~~~pn~~~~~GalvGGPn~~~~y~D~~~~y~~nEvaid~NA~~v~~la~l~~~ 495 (511)
+|..+ .++++.|||++++|+||||||..|+|+|+|++|++||||||||||||++||+|.+.
T Consensus 371 ~c~~~---~~~~~~pn~~~l~GalvGGP~~~d~y~D~~~~y~~nEvai~~NA~~v~~la~l~~~ 431 (433)
T 1ks8_A 371 TCDWN---TFNSPDPNYHVLSGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAALVAL 431 (433)
T ss_dssp CCSHH---HHTCSSCCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHHHHHHHHHHHHHHHT
T ss_pred ccccc---ccCCCCCCCCCCccceecCCCcccCcCcCccccccccccHHhHHHHHHHHHHHHhc
Confidence 78655 48899999999999999999999999999999999999999999999999999764
No 4
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=100.00 E-value=2e-110 Score=917.40 Aligned_cols=428 Identities=41% Similarity=0.747 Sum_probs=389.2
Q ss_pred chHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccCCCCCCCCCCCccccccceecCCCCcccccchHHHHHHHHHHHHHcH
Q 042201 37 TTFAYRDALGKAILFFEGQRSGKLPESQRVKWRGNSALSDGKPENVNLIGGYYDAGDNVKFGWPMAYSVSLLSWAAVEYQ 116 (511)
Q Consensus 37 ~~~~Y~~~l~~sl~fy~~QR~G~lp~~~~~~w~~~s~~~Dg~~~~~DlsGGWyDAGD~~Ky~~~~a~s~~~L~~~~~e~~ 116 (511)
+.++|.++|++||+||++||||+||+.++++||++||+.||++.++||+|||||||||+||++|+++++++|+|+++||+
T Consensus 2 ~~~~Y~~al~~sl~Ff~~QRsG~lp~~~r~~Wrgds~l~Dg~~~~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~ 81 (605)
T 1tf4_A 2 PAFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGFPMAFTATMLAWGAIESP 81 (605)
T ss_dssp CSSCHHHHHHHHHHHHHHTBCBSCCTTCCCTTCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHCH
T ss_pred CcchHHHHHHHHHHHHHHhcCCCCccccccCCCCCCcCCCcccccccCCCceeECCCCCEeccchHHHHHHHHHHHHHhH
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcccchhHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCCCCCCCCCCCCCCCCceEEEeCCCCcchHHHHHHHHHHH
Q 042201 117 REISSVNQLGYLRGAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALA 196 (511)
Q Consensus 117 ~~~~s~n~~pdiLdE~kwg~D~llkm~~~~g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA 196 (511)
+.|+++|++||||||||||+|||||||++++.+|.|||++..||.+|.+||+++.+|++|.++.++|+|++++++|||||
T Consensus 82 ~~~~~~g~~~d~ldeikwg~Dyllk~~~~~~~~y~qVGdg~~DH~~w~~pe~m~~~r~~y~~~~~~pgsd~a~~~AAAlA 161 (605)
T 1tf4_A 82 EGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMA 161 (605)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTCSBTTBEEEEESCHHHHHHCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHH
T ss_pred HHHhhcCCcccHHHHHHHHHHHHHHhccCCCeEEEEeCCCCcCccccCChhhCCCCCceeEecCCCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccccccCCHHHHHHHHHHHHHHHHHHHhcCCCccC---CCCccCCCCcchhHHHHHHHHHHHHcCChhHHHHHHHccC
Q 042201 197 AASIVFKKVDSIYSSRLLNHSKSLFEFADKHRGSYQA---SCPFYCSYSGYQDELLWAAAWLYKASEDNKYLDYVLSNQG 273 (511)
Q Consensus 197 ~as~vfk~~D~~yA~~~l~~A~~a~~~a~~~~~~y~~---~~~~Y~s~~~~~De~~wAAaeLy~aTg~~~Yl~~a~~~~~ 273 (511)
+||||||++||+||++||++||++|+||++||+.|.+ .+++|++++++.||++|||+|||++||+.+|+++++.+..
T Consensus 162 aAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~g~y~~~~~~~~~Y~s~s~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~~ 241 (605)
T 1tf4_A 162 ASSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVPAGAFYNSWSGYQDELVWGAYWLYKATGDDSYLAKAEYEYD 241 (605)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTSTTHHHHCCSSCSHHHHHHHHHHHHHHHCCHHHHHHHHHHGG
T ss_pred HHHhhccccCHHHHHHHHHHHHHHHHHHHHcCCCcCCCCCccccccCCCCCchHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998875 3568998889999999999999999999999999988651
Q ss_pred C---CC------CCcccCcChhhHHHHhhccccccCCchHHHHHHHHHHHHHHhhcCC-CCCcccccCCCCceeecCCCh
Q 042201 274 W---SQ------VASEFSWDNKFAGAQMLLAKEFFGGNKQLSLFKIHVESFVCALMPE-SSSVRIETTPGGLLYIRDSSN 343 (511)
Q Consensus 274 ~---~~------~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~ad~~~~~~~~~-~~~~~~~~t~~g~~w~~~w~n 343 (511)
. .. ..+.++||++..|+.+||++.. + .+.+++.++.++|.++.+ +++ +++++|+|+.|...||+
T Consensus 242 ~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~--~---~~~y~~~a~~~~~~~~~~~~~~-~~~~tp~Gl~~~~~WGs 315 (605)
T 1tf4_A 242 FLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKET--G---KQKYIDDANRWLDYWTVGVNGQ-RVPYSPGGMAVLDTWGA 315 (605)
T ss_dssp GSCBCTTSSCBCCSSCCSSSCCHHHHHHHHHHHH--C---CHHHHHHHHHHHHHTTTCBTTB-CCCBCTTSCBCCCSSSH
T ss_pred hcccccccccccccccccccchHHHHHHHHHhcc--C---hHHHHHHHHHHHHHHhcccCCC-ccccCCCcceecCCccH
Confidence 1 11 1257899999999998887542 2 356888899988876643 344 78899999998888999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccCccccCCCCCCHHHHHHHHHhccchhccCCCCCcceEeecCCCCCCCccccCCCCCC
Q 042201 344 LQYVTSATLLLFLYSKTLNTAHINGLQCGSAHFSASQISAFAKSQVDYILGKNPMKMSYMAGFGSKFPLQIHHRGASIPS 423 (511)
Q Consensus 344 ~~~a~n~a~l~~~ya~~l~~~~~~~~~~g~~~~~~~~y~~~a~~qldYlLG~Np~~~SyVtG~G~~~p~~phHR~ss~~~ 423 (511)
+++++|.+||+++|++++.+. ..+.+|+++|++|||||||+||+++|||||||+|+|++||||+++|+
T Consensus 316 ~~~~~n~a~l~~~~a~~~~~~-----------~~~~~y~~~A~~qidYiLG~Np~~~SyvvG~G~~~p~~pHHR~ss~~- 383 (605)
T 1tf4_A 316 LRYAANTAFVALVYAKVIDDP-----------VRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHGS- 383 (605)
T ss_dssp HHHHHHHHHHHHHHHHHCCCH-----------HHHHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCSCHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHhcccc-----------ccHHHHHHHHHHHHHHhcCCCCCCcceEecCCCCCCCCCcccccccC-
Confidence 999999999999999886421 13578999999999999999999999999999999999999998763
Q ss_pred CCCCCCccccCCCCccccCCCCCCCCCcccceecCCCC-CCCcccCcCccccCcccccCchHHHHHHhHhhcc
Q 042201 424 IGAHPAKVSCNDGYSSYYHSSNPNPNVHVGAIVGGPDS-NDQFKDLRTDYSHAEPTTYMNAAFVGSVAPLLAQ 495 (511)
Q Consensus 424 ~~~~p~~~~c~~g~~~~~~~~~pn~~~~~GalvGGPn~-~~~y~D~~~~y~~nEvaid~NA~~v~~la~l~~~ 495 (511)
+.+.+++|.|||++|+|+||||||. .|+|.|+|.+|++||||||||||||++||+|...
T Consensus 384 -------------~~~~~~~p~~~~~vl~GaLVGGP~~~~d~y~D~~~~y~~nEvai~~NA~lv~~lA~l~~~ 443 (605)
T 1tf4_A 384 -------------WTDSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEE 443 (605)
T ss_dssp -------------SSSCTTSSSSCSSCCTTCBCCCCSSTTCCCCCCTTCTTTTCCCGGGGHHHHHHHHHHHHH
T ss_pred -------------ccccccCCccCCCCCcceEEeCCCCCcccccccccchhhcCCccccchHHHHHHHHHHHh
Confidence 2223668899999999999999998 9999999999999999999999999999999763
No 5
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum}
Probab=100.00 E-value=5.7e-111 Score=922.64 Aligned_cols=464 Identities=30% Similarity=0.514 Sum_probs=380.4
Q ss_pred CCccchhHHHHHHHHHHHHhhcCcccccCCCCcCCCchHHHHHHHHHHHHHHHHhhcCCCCC-CCCCCccCCCCCCCC--
Q 042201 1 MGQGRITRLGVWGLILWHFLARNKVTAIDHEGFCSTTTFAYRDALGKAILFFEGQRSGKLPE-SQRVKWRGNSALSDG-- 77 (511)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~l~~sl~fy~~QR~G~lp~-~~~~~w~~~s~~~Dg-- 77 (511)
|-.+|+.++.+..++..-++... +.+.......+.+.++|.++|++||+||++||||++|+ .++++||++||++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Y~~al~~sl~ff~~QRsG~~~~~~~~~~WR~~shl~D~~~ 79 (611)
T 2yik_A 1 MRKNLFAKRAVAFLLGIVITAAG-IVSFNTVSTSAAGEYNYAKALQYSMFFYDANMCGTGVDENSLLSWRGDCHVYDARL 79 (611)
T ss_dssp --------------------------------------CCHHHHHHHHTHHHHHHBCBTTHHHHCSCTTCCCBCGGGGGE
T ss_pred CchhHHHHHHHHHHHHHHHHHhh-hhccccccccccchhHHHHHHHHHHHHHHHHcCCCCCCcccCCCcCCCCCcccccc
Confidence 55565544433333333233322 11222222334677899999999999999999999987 899999999999998
Q ss_pred ------------------------CCCccccccceecCCCCcccccchHHHHHHHHHHHHHcHHHHhcccchhHHHHHHH
Q 042201 78 ------------------------KPENVNLIGGYYDAGDNVKFGWPMAYSVSLLSWAAVEYQREISSVNQLGYLRGAIR 133 (511)
Q Consensus 78 ------------------------~~~~~DlsGGWyDAGD~~Ky~~~~a~s~~~L~~~~~e~~~~~~s~n~~pdiLdE~k 133 (511)
++.++||+|||||||||+||++|+++++++|+|+++||++.|+..+++||||||||
T Consensus 80 p~~~~~~~~~~~~~~~y~~~~~~~~~~~~DlsGGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~~~~~~~g~~~d~ldeik 159 (611)
T 2yik_A 80 PLDSQNTNMSDGFISSNRSVLDPDGDGKVDVSGGFHDAGDHVKFGLPEAYAASTVGWGYYEFKDQFRATGQAVHAEVILR 159 (611)
T ss_dssp ECSTTTBSSCHHHHHHHHHHHCTTCSSEECCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHSHHHHHHTTCHHHHHHHHH
T ss_pred cccccccccccccccccccccccCCCCcccCCCCceeCCCCCeeccchHHHHHHHHHHHHHhHHHHhhcCCchhHHHHHH
Confidence 67889999999999999999999999999999999999999998999999999999
Q ss_pred HHHHHHHhc-----cCCCCeEEEEcCCCCCCCCCCCCCCCCCCCceEEEeCCCCcchHHHHHHHHHHHHhccccccCCHH
Q 042201 134 WGTDFILRA-----HTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALAAASIVFKKVDSI 208 (511)
Q Consensus 134 wg~D~llkm-----~~~~g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~as~vfk~~D~~ 208 (511)
||+|||||| |+++|.||+|||++..||.+|++||+++.+|++|.++.++|+|++++++|||||+||||||++||+
T Consensus 160 wg~Dyllkmq~~~~~~~~g~~y~qVgdg~~Dh~~w~~Pe~~~~~R~~y~v~~~~pgsd~a~~~AAAlAaAS~vfk~~D~~ 239 (611)
T 2yik_A 160 YFNDYFMRCTFRDASGNVVAFCHQVGDGDIDHAFWGAPENDTMFRRGWFITKEKPGTDIISATAASLAINYMNFKDTDPQ 239 (611)
T ss_dssp HHHHHHHHTEEECTTSCEEEEEEEESCHHHHTTCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred HHHHHHHHcccccccCCCCcEEEEeCCCCccccCCCChhhCCCCCcceeecCCCCccHHHHHHHHHHHHHHHhccccCHH
Confidence 999999999 788999999999999999999999999999999999988999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCccC----CCCccCCCCcchhHHHHHHHHHHHHcCChhHHHHHHHccCCC-CCCcccCc
Q 042201 209 YSSRLLNHSKSLFEFADKHRGSYQA----SCPFYCSYSGYQDELLWAAAWLYKASEDNKYLDYVLSNQGWS-QVASEFSW 283 (511)
Q Consensus 209 yA~~~l~~A~~a~~~a~~~~~~y~~----~~~~Y~s~~~~~De~~wAAaeLy~aTg~~~Yl~~a~~~~~~~-~~~~~~~W 283 (511)
||++||++||++|+||++||+.|.+ .+++|++ +++.||++|||+|||++||+++|+++++++.... ...+.++|
T Consensus 240 yA~~~L~~Ak~~~~fA~~~~~~y~~~~~~~~~~Y~s-s~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~~~~~~~~~~~~W 318 (611)
T 2yik_A 240 YAAKSLDYAKALFDFAEKNPKGVVQGEDGPKGYYGS-SKWQDDYCWAAAWLYLATQNEHYLDEAFKYYDYYAPPGWIHCW 318 (611)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCCCCCGGGTTTTTSCC-CCSHHHHHHHHHHHHHHHCCHHHHHHHHHHCCTTSTTTSCSBT
T ss_pred HHHHHHHHHHHHHHHHHHcCCcccCCCcccCcCCCC-CCcccHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCccCcc
Confidence 9999999999999999999999854 5789999 9999999999999999999999999999875321 34468999
Q ss_pred ChhhHHHHhhccccccC---CchH-HHHHHHHHHHH----------HHhhcCC-CCCcccccCCCCceeecCCChHHHHH
Q 042201 284 DNKFAGAQMLLAKEFFG---GNKQ-LSLFKIHVESF----------VCALMPE-SSSVRIETTPGGLLYIRDSSNLQYVT 348 (511)
Q Consensus 284 d~~~~g~~~lla~~~~~---~~~~-~~~~~~~ad~~----------~~~~~~~-~~~~~~~~t~~g~~w~~~w~n~~~a~ 348 (511)
|++..|+++||++.... .... .+.+++.++.+ +|..+++ +++ +++++|+|+.|...||++++++
T Consensus 319 d~~~~g~~~lLa~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~tp~Gl~~~~~WGs~~~~~ 397 (611)
T 2yik_A 319 NDVWSGTACILAEINDLYDKDSQNFEDRYKRASNKNQWEQIDFWKPIQDLLDKWSGG-GITVTPGGYVFLNQWGSARYNT 397 (611)
T ss_dssp TBCHHHHHHHHHHHHHHHSTTSSHHHHHHHHHTTCCTTSCCCTTHHHHHHHHHHHTT-SSCBCTTSCBCSCSTTHHHHHH
T ss_pred ccchHHHHHHHHhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCc-eeccCCccccccCCCchHHHHH
Confidence 99999999988764311 0011 34455555442 1111111 223 6788999999988899999999
Q ss_pred HHHHHHHHHHHHhhhcccCccccCCCCCCHHHHHHHHHhccchhccCCCCCcceEeecCCCCCCCccccCCCCCCCCCCC
Q 042201 349 SATLLLFLYSKTLNTAHINGLQCGSAHFSASQISAFAKSQVDYILGKNPMKMSYMAGFGSKFPLQIHHRGASIPSIGAHP 428 (511)
Q Consensus 349 n~a~l~~~ya~~l~~~~~~~~~~g~~~~~~~~y~~~a~~qldYlLG~Np~~~SyVtG~G~~~p~~phHR~ss~~~~~~~p 428 (511)
+++||+++|++++. ..+.+|+++|++|||||||+||+++|||||||+|+|++||||+++||.
T Consensus 398 ~~afl~~~ya~~~~-------------~~~~~y~~~A~~qidYiLG~NP~~~SyvvG~G~~~p~~pHHR~a~~~~----- 459 (611)
T 2yik_A 398 AAQLIALVYDKHHG-------------DTPSKYANWARSQMDYLLGKNPLNRCYVVGYSSNSVKYPHHRAASGLK----- 459 (611)
T ss_dssp HHHHHHHHHHHTTT-------------SSCCHHHHHHHHHHHHHTTCSTTCCBSBTTSSTTBCCCCBCHHHHCCS-----
T ss_pred HHHHHHHHHHHhcC-------------ccHHHHHHHHHHhHHhhcCCCCCCcceEeccCCCCCCCCcchhhcCcc-----
Confidence 99999999988642 134689999999999999999999999999999999999999988753
Q ss_pred CccccCCCCccccCCCCCCCCCcccceecCCCCCCCcccCcCccccCcccccCchHHHHHHhHhhccC
Q 042201 429 AKVSCNDGYSSYYHSSNPNPNVHVGAIVGGPDSNDQFKDLRTDYSHAEPTTYMNAAFVGSVAPLLAQS 496 (511)
Q Consensus 429 ~~~~c~~g~~~~~~~~~pn~~~~~GalvGGPn~~~~y~D~~~~y~~nEvaid~NA~~v~~la~l~~~~ 496 (511)
.++.|.|||++++|+||||||..|+|.|+|++|++||||||||||||++||+|....
T Consensus 460 -----------~~~~p~p~~~vl~GaLVGGPd~~d~y~D~~~~y~~nEvai~~NA~lv~~la~l~~~~ 516 (611)
T 2yik_A 460 -----------DANDSSPHKYVLYGALVGGPDASDQHVDRTNDYIYNEVAIDYNAAFVGACAGLYRFF 516 (611)
T ss_dssp -----------CTTCCSCCSSCCTTCBCSCCCTTSCCCCCTTCTTTTBCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------cccCCCCCCCCCCceeecCCCcccCcCCCCcceeeccceecCccHHHHHHHHHHHhc
Confidence 156789999999999999999999999999999999999999999999999998754
No 6
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=100.00 E-value=8.5e-109 Score=904.99 Aligned_cols=426 Identities=35% Similarity=0.620 Sum_probs=384.5
Q ss_pred hHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccCCCCCCCCCCCccccccceecCCCCcccccchHHHHHHHHHHHHHcHH
Q 042201 38 TFAYRDALGKAILFFEGQRSGKLPESQRVKWRGNSALSDGKPENVNLIGGYYDAGDNVKFGWPMAYSVSLLSWAAVEYQR 117 (511)
Q Consensus 38 ~~~Y~~~l~~sl~fy~~QR~G~lp~~~~~~w~~~s~~~Dg~~~~~DlsGGWyDAGD~~Ky~~~~a~s~~~L~~~~~e~~~ 117 (511)
.++|.++|++||+||++||||++|+.++++||++||+.||.+.++||+|||||||||+||++|+++|+++|+|+++||++
T Consensus 3 ~~~Y~~al~~sl~ff~~QRsG~lp~~~~~~WRgdshl~Dg~~~~~DlsGGwyDAGD~~Kf~~p~a~t~~~L~w~~~e~~~ 82 (614)
T 1g87_A 3 TYNYGEALQKSIMFYEFQRSGDLPADKRDNWRDDSGMKDGSDVGVDLTGGWYDAGDHVKFNLPMSYTSAMLAWSLYEDKD 82 (614)
T ss_dssp CCCHHHHHHHHHHHHHHHBCBSCCTTCSBSSCCCBSTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCcccccccccccCCCCeeeCCCCcEeccccHHHHHHHHHHHHHhHH
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccchhHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCCCCCCCCCCCCCCCCceEEEeCCCCcchHHHHHHHHHHHH
Q 042201 118 EISSVNQLGYLRGAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALAA 197 (511)
Q Consensus 118 ~~~s~n~~pdiLdE~kwg~D~llkm~~~~g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~ 197 (511)
.|+++|++||||||||||+|||||||+++|.||+|||++..||.+|++||+++.+|++|.++.++|+|++++++|||||+
T Consensus 83 ~~~~~g~~~d~ldeikwg~Dyllk~~~~~~~~y~qVGdg~~DH~~w~~pe~~~~~r~~y~v~~~~pgsd~a~e~AAAlAa 162 (614)
T 1g87_A 83 AYDKSGQTKYIMDGIKWANDYFIKCNPTPGVYYYQVGDGGKDHSWWGPAEVMQMERPSFKVDASKPGSAVCASTAASLAS 162 (614)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHTCCSTTCEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHHHH
T ss_pred HHhhCCChHHHHHHHHHHHHHHHHhccCCCcEEEEecCCCcCccccCCcccCCCCCcceEecCCCCccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccccCCHHHHHHHHHHHHHHHHHHHhcCCCccC--CCCccCCCCcchhHHHHHHHHHHHHcCChhHHHHHHHccCCC
Q 042201 198 ASIVFKKVDSIYSSRLLNHSKSLFEFADKHRGSYQA--SCPFYCSYSGYQDELLWAAAWLYKASEDNKYLDYVLSNQGWS 275 (511)
Q Consensus 198 as~vfk~~D~~yA~~~l~~A~~a~~~a~~~~~~y~~--~~~~Y~s~~~~~De~~wAAaeLy~aTg~~~Yl~~a~~~~~~~ 275 (511)
||||||++||+||++||++||++|+||++||+.+.. .+++|++ +++.||++|||+|||++||+.+|+++++.+....
T Consensus 163 AS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~~~~~~~~Y~s-s~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~~~~ 241 (614)
T 1g87_A 163 AAVVFKSSDPTYAEKCISHAKNLFDMADKAKSDAGYTAASGYYSS-SSFYDDLSWAAVWLYLATNDSTYLDKAESYVPNW 241 (614)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHHHHHHHHCCCTTCCTTTTTSCC-SCSHHHHHHHHHHHHHHHCCHHHHHHHHHTGGGS
T ss_pred HHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCcCCcCC-CCchhHHHHHHHHHHHHhCCHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999987643 6789999 9999999999999999999999999999864211
Q ss_pred ---------CCCcccCcChhhHHHHhhccccccCCchHHHHHHHHHHHHHHhhcCCCCCcccccCCCCceeecCCChHHH
Q 042201 276 ---------QVASEFSWDNKFAGAQMLLAKEFFGGNKQLSLFKIHVESFVCALMPESSSVRIETTPGGLLYIRDSSNLQY 346 (511)
Q Consensus 276 ---------~~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~t~~g~~w~~~w~n~~~ 346 (511)
...+.|+||++..++++||++.. ++ +.+++.++.+++.++++.+..+++++|+|+.|...||++++
T Consensus 242 ~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~tp~Gl~~~~~Wgs~~~ 316 (614)
T 1g87_A 242 GKEQQTDIIAYKWGQCWDDVHYGAELLLAKLT--NK---QLYKDSIEMNLDFWTTGVNGTRVSYTPKGLAWLFQWGSLRH 316 (614)
T ss_dssp CBCTTSSSBCCSSCCBTTBCHHHHHHHHHHHH--CC---HHHHHHHHHHHHHHTTCBTTBCCEECTTSCEECCSSSHHHH
T ss_pred ccccccccccccCCcCccchHHHHHHHHHhcc--Cc---HHHHHHHHHHHHHhhhccCCCccccCCCCceeccCCCcHHH
Confidence 12357999999999999888652 22 34566666666555544433478899999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcccCccccCCCCCCHHHHHHHHHhccchhccCCCCCcceEeecCCCCCCCccccCCCCCCCCC
Q 042201 347 VTSATLLLFLYSKTLNTAHINGLQCGSAHFSASQISAFAKSQVDYILGKNPMKMSYMAGFGSKFPLQIHHRGASIPSIGA 426 (511)
Q Consensus 347 a~n~a~l~~~ya~~l~~~~~~~~~~g~~~~~~~~y~~~a~~qldYlLG~Np~~~SyVtG~G~~~p~~phHR~ss~~~~~~ 426 (511)
++|++||+++|++++. |+ ..++.+|+++|++|||||||+| ++|||||||+|+|++||||+++||.
T Consensus 317 ~~n~afl~~~y~~~~~--------~~--~~~~~~y~~~A~~qidYiLG~n--~~SyvvG~G~~~p~~pHHR~ss~~~--- 381 (614)
T 1g87_A 317 ATTQAFLAGVYAEWEG--------CT--PSKVSVYKDFLKSQIDYALGST--GRSFVVGYGVNPPQHPHHRTAHGSW--- 381 (614)
T ss_dssp HHHHHHHHHHHHHSTT--------SC--HHHHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCCSCCBCHHHHTCS---
T ss_pred HHHHHHHHHHHHHhhC--------CC--ccCHHHHHHHHHHHHHHhcCCC--CcceEeccCCCCCCCCcchhhccCc---
Confidence 9999999999988742 22 1246799999999999999998 7899999999999999999998854
Q ss_pred CCCccccCCCCccccCCCCCCCCCcccceecCCCCCCCcccCcCccccCcccccCchHHHHHHhHhhcc
Q 042201 427 HPAKVSCNDGYSSYYHSSNPNPNVHVGAIVGGPDSNDQFKDLRTDYSHAEPTTYMNAAFVGSVAPLLAQ 495 (511)
Q Consensus 427 ~p~~~~c~~g~~~~~~~~~pn~~~~~GalvGGPn~~~~y~D~~~~y~~nEvaid~NA~~v~~la~l~~~ 495 (511)
.+.++.|.|||++|+|+||||||..|+|.|+|.+|++||||||||||||++||+|...
T Consensus 382 -----------~~~~~~p~p~~~~l~GaLVGGP~~~D~y~D~~~~y~~nEvai~~NA~lv~~lA~l~~~ 439 (614)
T 1g87_A 382 -----------TDQMTSPTYHRHTIYGALVGGPDNADGYTDEINNYVNNEIACDYNAGFTGALAKMYKH 439 (614)
T ss_dssp -----------SSCTTSSSSCSSCCTTCBCCCCCTTSCCCCCTTCHHHHBCCHHHHHHHHHHHHHHHHH
T ss_pred -----------cccccCCCCCCCCccccEeeCCCcccCccccccchhhcCCccccchHHHHHHHHHHHh
Confidence 1136688999999999999999999999999999999999999999999999999774
No 7
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=100.00 E-value=4.6e-98 Score=810.04 Aligned_cols=411 Identities=23% Similarity=0.330 Sum_probs=350.2
Q ss_pred CCchHHHHHHHHHHHHHHHHhhcCC-CCCCCCCCccCCCCC-CC----CCCCccccccceecCCCCcccccchHHHHHHH
Q 042201 35 STTTFAYRDALGKAILFFEGQRSGK-LPESQRVKWRGNSAL-SD----GKPENVNLIGGYYDAGDNVKFGWPMAYSVSLL 108 (511)
Q Consensus 35 ~~~~~~Y~~~l~~sl~fy~~QR~G~-lp~~~~~~w~~~s~~-~D----g~~~~~DlsGGWyDAGD~~Ky~~~~a~s~~~L 108 (511)
.|++++|.++|+++|+||++||||+ ||+.++++||+++++ +| |.+.++||+|||||||||+||++|+++|+++|
T Consensus 82 ~I~~~~Y~~~l~~sl~ff~~QRsG~~l~~~~~~~wr~~~~h~dd~~~~g~~~~~Dl~GGwyDAGD~~K~~~p~a~t~~~L 161 (537)
T 3gzk_A 82 VIHRRAYRDVLEAMLRFFDYQLCGVVLPEDEAGPWAHGACHTSDAKVFGTERALACPGGWHDAGDYGKYTVPAAKAVADL 161 (537)
T ss_dssp EEETTTTHHHHHHHHHHHHHTBSSSCBCHHHHGGGCBCCCCCSCEEETTSSCEECCCCSBCCSSSCCEEHHHHHHHHHHH
T ss_pred eeCcchHHHHHHHHHHHHHHHhCCCcCCccccCCCCCcccccCcccccCCcCccccccceecCCCcceecccHHHHHHHH
Confidence 3788999999999999999999998 999999999887644 43 45688999999999999999999999999999
Q ss_pred HHHHHHcHHHHh-------cccc--hhHHHHHHHHHHHHHHhccC-CCCeEEEEcCCCCCCCCCCCCCCCCCCCceEEEe
Q 042201 109 SWAAVEYQREIS-------SVNQ--LGYLRGAIRWGTDFILRAHT-SPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRI 178 (511)
Q Consensus 109 ~~~~~e~~~~~~-------s~n~--~pdiLdE~kwg~D~llkm~~-~~g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~~~~~ 178 (511)
+|++++||+.|. ++|+ +||||||||||+|||||||+ ++|.+|+|||+..+. ..|.+||+++++|+++++
T Consensus 162 ~~a~~~~~~~~~~~~~i~es~~~~~~~d~ldeikwg~D~llk~~~~~~g~~y~~v~~~~w~-g~~~~Pe~~~~~R~~~~~ 240 (537)
T 3gzk_A 162 LLAHEYFPAALAHVRPMRSVHRAPHLPPALEVAREEIAWLLTMQDPATGGVYHKVTTPSFP-PLDTRPEDDDAPLVLSPI 240 (537)
T ss_dssp HHHHHHCHHHHHTCCCSGGGSCSSCCCHHHHHHHHHHHHHHHTBCTTTCCBBSEEECSSCC-CTTCCGGGCCSCEEECCB
T ss_pred HHHHHHhhhhhhhhhccccccCcccHHHHHHHHHHHHHHHHhcccCCCCeEEEEecCCCcC-CCCcCcccCCCcceEeec
Confidence 999999999884 5788 99999999999999999997 569999999986442 234899999999999886
Q ss_pred CCCCcchHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHhcCCCc-cC----CCCccCCCCcchhHHHHHHH
Q 042201 179 TSDSPGSEAAAESAAALAAASIVFKKVDSIYSSRLLNHSKSLFEFADKHRGSY-QA----SCPFYCSYSGYQDELLWAAA 253 (511)
Q Consensus 179 ~~~~p~s~~a~~~AAalA~as~vfk~~D~~yA~~~l~~A~~a~~~a~~~~~~y-~~----~~~~Y~s~~~~~De~~wAAa 253 (511)
+ +.+++++|||||+||||||++||+||++||++||++|+||++||+.+ .+ .+++|++ +++.||++|||+
T Consensus 241 ~-----t~~~~~~AAalA~as~vf~~~D~~yA~~~L~~A~~~~~fa~~~~~~~~~~~~~~~~~~Y~~-~~~~Del~wAA~ 314 (537)
T 3gzk_A 241 S-----YAATATFCAAMAHAALVYRPFDPALSSCCADAARRAYAWLGAHEMQPFHNPDGILTGEYGD-AELRDELLWASC 314 (537)
T ss_dssp C-----HHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHTSCCCCCCCCTTCCSCCCCC-SCCHHHHHHHHH
T ss_pred C-----CcHHHHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHHHhcccccccCCcccccCCcCC-CccchHHHHHHH
Confidence 4 67889999999999999999999999999999999999999999874 22 4678999 999999999999
Q ss_pred HHHHHcCChhHHHHHHHccCCCCCCcccCcChhhHHHH--hhccccccCC---chH-HHHHHHHHHHHHHhhcCCCCCcc
Q 042201 254 WLYKASEDNKYLDYVLSNQGWSQVASEFSWDNKFAGAQ--MLLAKEFFGG---NKQ-LSLFKIHVESFVCALMPESSSVR 327 (511)
Q Consensus 254 eLy~aTg~~~Yl~~a~~~~~~~~~~~~~~Wd~~~~g~~--~lla~~~~~~---~~~-~~~~~~~ad~~~~~~~~~~~~~~ 327 (511)
|||++||+.+|+++++++... .....|+||++..+++ +||++..... .++ ++.+++.+|.++ ..++.+|+ +
T Consensus 315 ~Ly~aTgd~~Yl~~a~~~~~~-~~~~~~~Wd~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ad~~~-~~~~~~~~-g 391 (537)
T 3gzk_A 315 ALLRMTGDSAWARVCEPLLDL-DLPWELGWADVALYGVMDYLRTPRAAVSDDVRNKVKSRLLRELDALA-AMAESHPF-G 391 (537)
T ss_dssp HHHHHHCCGGGHHHHHHHHHS-CCCCCCSSSCCHHHHHHHHHTSCGGGSCHHHHHHHHHHHHHHHHHHH-HHHHHSTT-C
T ss_pred HHHHHhCCHHHHHHHHHhhhc-cCCCccchHHhHHHHHHHHHhCccccCCHHHHHHHHHHHHHHHHHHH-HhccCCCC-c
Confidence 999999999999999987521 1235899999988765 3556542111 122 667788888886 55566776 6
Q ss_pred cccCCCCceeecCCChHHHHHHHHHHHHHHHHHhhhcccCccccCCCCCCHHHHHHHH-HhccchhccCCCCCcceEeec
Q 042201 328 IETTPGGLLYIRDSSNLQYVTSATLLLFLYSKTLNTAHINGLQCGSAHFSASQISAFA-KSQVDYILGKNPMKMSYMAGF 406 (511)
Q Consensus 328 ~~~t~~g~~w~~~w~n~~~a~n~a~l~~~ya~~l~~~~~~~~~~g~~~~~~~~y~~~a-~~qldYlLG~Np~~~SyVtG~ 406 (511)
++++++++.| |++++++|.+++++++.++ + .+.+|+++| ++|||||||+||+++||||||
T Consensus 392 ~~~~~~~~~W----Gsn~~~~n~a~~l~~a~~~-~--------------~~~~y~~~aa~~qidYiLG~NP~~~SyVvG~ 452 (537)
T 3gzk_A 392 IPMRDDDFIW----GSNMVLLNRAMAFLLAEGV-G--------------VLHPAAHTVAQRAADYLFGANPLGQCYVTGF 452 (537)
T ss_dssp CSCCGGGCCT----THHHHHHHHHHHHHHHGGG-T--------------CCCTTHHHHHHHHHHHHBTCSTTCCBCBBTC
T ss_pred eeecCCCCcc----cchHHHHHHHHHHHHHhhc-c--------------CCHHHHHHHHHHhHHHhcCCCCCCceeEecC
Confidence 6777777755 6888999999988877554 2 234789999 999999999999999999999
Q ss_pred CCCCCCCccccCCCCCCCCCCCCccccCCCCccccCCCCCCCCCcccceecCCCCC----------------CCcccCcC
Q 042201 407 GSKFPLQIHHRGASIPSIGAHPAKVSCNDGYSSYYHSSNPNPNVHVGAIVGGPDSN----------------DQFKDLRT 470 (511)
Q Consensus 407 G~~~p~~phHR~ss~~~~~~~p~~~~c~~g~~~~~~~~~pn~~~~~GalvGGPn~~----------------~~y~D~~~ 470 (511)
|+|+|++||||.++++. +|+++||+||||||.. ++|.|+|+
T Consensus 453 G~~~p~~pHHR~s~~~~-----------------------~~~p~~GalVGGPn~~~~D~~~~~~~~~~~~~d~y~D~~~ 509 (537)
T 3gzk_A 453 GQRPVRHPHHRPSVADD-----------------------VDHPVPGMVVGGPNRHLQDEIARAQLAGRPAMEAYIDHQD 509 (537)
T ss_dssp SSSCBCSCBCHHHHHHC-----------------------TTSCCTTCBCCCCCTTCCSHHHHHHCTTCCGGGCCCCCTT
T ss_pred CCCCCCCCcchhhhcCC-----------------------CCCCCCCCCccCCCcccccchhhhcccCCCcccCcCCCCc
Confidence 99999999999876521 1267899999999976 79999999
Q ss_pred ccccCcccccCchHHHHHHhHhhccCC
Q 042201 471 DYSHAEPTTYMNAAFVGSVAPLLAQSE 497 (511)
Q Consensus 471 ~y~~nEvaid~NA~~v~~la~l~~~~~ 497 (511)
+|++||||||||||||++||+|.+..+
T Consensus 510 ~y~~nEvai~~NA~lv~~lA~l~~~~g 536 (537)
T 3gzk_A 510 SYSTNEVAVYWNSPAVFVIAALLEARG 536 (537)
T ss_dssp CHHHHBCCHHHHHHHHHHHHHHHSCCC
T ss_pred cccccccchHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999987654
No 8
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2
Probab=100.00 E-value=7.7e-97 Score=815.09 Aligned_cols=409 Identities=20% Similarity=0.253 Sum_probs=351.6
Q ss_pred CCchHHHHHHHHHHHHHHHHhhcC-CCCCCCCCC-ccCCCCCCCC--------CCCccccccceecCCCCcccccchHHH
Q 042201 35 STTTFAYRDALGKAILFFEGQRSG-KLPESQRVK-WRGNSALSDG--------KPENVNLIGGYYDAGDNVKFGWPMAYS 104 (511)
Q Consensus 35 ~~~~~~Y~~~l~~sl~fy~~QR~G-~lp~~~~~~-w~~~s~~~Dg--------~~~~~DlsGGWyDAGD~~Ky~~~~a~s 104 (511)
.|++++|.++|++||+||++|||| .||+.++++ ||+++++.|+ ++.++||+|||||||||+||++|++++
T Consensus 123 ~I~~~~Y~~al~~sl~ff~~QRsG~~lp~~~~~~~Wr~~s~h~D~~~~~~~~~~~~~vDl~GGwyDAGD~~Kf~~p~a~t 202 (639)
T 1clc_A 123 KIAMNVYEDAFKTAMLGMYLLRCGTSVSATYNGIHYSHGPCHTNDAYLDYINGQHTKKDSTKGWHDAGDYNKYVVNAGIT 202 (639)
T ss_dssp EECTTTTHHHHHHHHHHHHHTBCSSCEEEEETTEEEEECCCCTTCCBCTTTTSCCCBCCCCCSBCCSSSCCEEHHHHHHH
T ss_pred eechhhhhHHHHHHHHHHHHhcCCCcCccccccCccCCCccccCCccccccCCCCccccCCCcceeCCCCCEeCccHHHH
Confidence 368899999999999999999999 699999999 9888777665 678999999999999999999999999
Q ss_pred HHHHHHHHHHcHHHHhc--------ccchhHHHHHHHHHHHHHHhccC-CC-CeEEEEcCCCCCCCCCCCCCCCCCCCce
Q 042201 105 VSLLSWAAVEYQREISS--------VNQLGYLRGAIRWGTDFILRAHT-SP-TTLYTQVGDGNADHQCWERPEDMDTPRT 174 (511)
Q Consensus 105 ~~~L~~~~~e~~~~~~s--------~n~~pdiLdE~kwg~D~llkm~~-~~-g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~ 174 (511)
+++|+|+++||++.|.. +|++||||||||||+|||||||. ++ |.+|||||++.+||. .+||+++.+|+
T Consensus 203 ~~~L~w~~~~~~~~~~~~~~~ipes~~~~~d~ldeikwg~Dyllk~q~~~~~g~~y~~vgd~~~~~~--~~Pe~~~~~R~ 280 (639)
T 1clc_A 203 VGSMFLAWEHFKDQLEPVALEIPEKNNSIPDFLDELKYEIDWILTMQYPDGSGRVAHKVSTRNFGGF--IMPENEHDERF 280 (639)
T ss_dssp HHHHHHHHHHSHHHHTTCCCSSGGGGSSSCHHHHHHHHHHHHHHTTBCTTSSCCBEEEEECSSCCCS--CCGGGCCSCCE
T ss_pred HHHHHHHHHHhhhhhhccccCCccCCCcHHHHHHHHHHHHHHHHHhccccCCCeEEEEecCCCCCCC--CCchhcCCCce
Confidence 99999999999999875 99999999999999999999975 66 999999999989984 89999999999
Q ss_pred EEEeCCCCcchHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHhcCCC-ccC----CCCccCCCCcchhHHH
Q 042201 175 LYRITSDSPGSEAAAESAAALAAASIVFKKVDSIYSSRLLNHSKSLFEFADKHRGS-YQA----SCPFYCSYSGYQDELL 249 (511)
Q Consensus 175 ~~~~~~~~p~s~~a~~~AAalA~as~vfk~~D~~yA~~~l~~A~~a~~~a~~~~~~-y~~----~~~~Y~s~~~~~De~~ 249 (511)
+++ |+|++++++|||||+||||||++||+||++||++||++|+||++||+. |.+ .+++|++ +++.||++
T Consensus 281 ~~~-----~~s~~a~e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~y~~~~~~~~g~Y~s-s~~~DEl~ 354 (639)
T 1clc_A 281 FVP-----WSSAATADFVAMTAMAARIFRPYDPQYAEKCINAAKVSYEFLKNNPANVFANQSGFSTGEYAT-VSDADDRL 354 (639)
T ss_dssp EEE-----ECHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTCCSCCCCC-SCSHHHHH
T ss_pred Eec-----CCcHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCccCCCccccccccCC-CCcchHHH
Confidence 987 469999999999999999999999999999999999999999999988 443 5679999 89999999
Q ss_pred HHHHHHHHHcCChhHHHHHHHccCC-CCCCc-ccCcChhhHHHHhhcc---ccccCCc--hH-HHHHHHHHHHHHHhhcC
Q 042201 250 WAAAWLYKASEDNKYLDYVLSNQGW-SQVAS-EFSWDNKFAGAQMLLA---KEFFGGN--KQ-LSLFKIHVESFVCALMP 321 (511)
Q Consensus 250 wAAaeLy~aTg~~~Yl~~a~~~~~~-~~~~~-~~~Wd~~~~g~~~lla---~~~~~~~--~~-~~~~~~~ad~~~~~~~~ 321 (511)
|||+|||++||+++|+++++++... ..... .|+||++..++.++|+ +..+.+. ++ ++.+++.++.+++. .+
T Consensus 355 WAAawLy~ATgd~~Yl~~a~~~~~~~~~~~~~~f~Wd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~ 433 (639)
T 1clc_A 355 WAAAEMWETLGDEEYLRDFENRAAQFSKKIEADFDWDNVANLGMFTYLLSERPGKNPALVQSIKDSLLSTADSIVRT-SQ 433 (639)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHTCSSSCCSSCCTTCCHHHHHHHHHHCCCSCCCHHHHHHHHHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHHHHhhhhhccChHHHHHHHHHHHHHHHHHHHh-cc
Confidence 9999999999999999999886411 11223 3499999988777665 3222211 22 66788888998854 46
Q ss_pred CCCCcccccCCCCceeecCCChHHHHHHHHHHHHHHHHHhhhcccCccccCCCCCCHHHHHHHHHhccchhccCCCCCcc
Q 042201 322 ESSSVRIETTPGGLLYIRDSSNLQYVTSATLLLFLYSKTLNTAHINGLQCGSAHFSASQISAFAKSQVDYILGKNPMKMS 401 (511)
Q Consensus 322 ~~~~~~~~~t~~g~~w~~~w~n~~~a~n~a~l~~~ya~~l~~~~~~~~~~g~~~~~~~~y~~~a~~qldYlLG~Np~~~S 401 (511)
.+|+ +++++ . ...||++++++|.+|+++++.++ . .+.+|+++|++|||||||+||+++|
T Consensus 434 ~~~~-g~~~~-~----~~~WGsn~~~~~~a~~~~~a~~l-~--------------~~~~~~~~A~~qidYiLG~NP~~~S 492 (639)
T 1clc_A 434 NHGY-GRTLG-T----TYYWGCNGTVVRQTMILQVANKI-S--------------PNNDYVNAALDAISHVFGRNYYNRS 492 (639)
T ss_dssp TSTT-CCTTT-T----CCCTTHHHHHHHTHHHHHHHHHH-S--------------CCHHHHHHHHHHHHHHHTCSTTCCC
T ss_pred CCCC-CcccC-C----CCCCchHHHHHHHHHHHHHHHhc-C--------------CHHHHHHHHHHHHhhccCCCCCCce
Confidence 6676 44443 2 33578899999999988876544 2 3468999999999999999999999
Q ss_pred eEeecCCCCCCCccccCCCCCCCCCCCCccccCCCCccccCCCCCCCCCcccceecCCCC-CCCcccCcCccccCccccc
Q 042201 402 YMAGFGSKFPLQIHHRGASIPSIGAHPAKVSCNDGYSSYYHSSNPNPNVHVGAIVGGPDS-NDQFKDLRTDYSHAEPTTY 480 (511)
Q Consensus 402 yVtG~G~~~p~~phHR~ss~~~~~~~p~~~~c~~g~~~~~~~~~pn~~~~~GalvGGPn~-~~~y~D~~~~y~~nEvaid 480 (511)
||||||.|+|++||||.++++ ++ |.+++|+||||||. .|+|.|+|.+|++|||+||
T Consensus 493 yvvG~G~~~p~~pHHR~s~~~-------------~~----------~~~~~GalVGGP~~~~d~y~D~r~~y~~nE~~~~ 549 (639)
T 1clc_A 493 YVTGLGINPPMNPHDRRSGAD-------------GI----------WEPWPGYLVGGGWPGPKDWVDIQDSYQTNEIAIN 549 (639)
T ss_dssp SBTTSSSSCCSSCBCHHHHHS-------------SC----------SSCCSSCBCCCCCSSTTCCCCCTTCTTTSBCCHH
T ss_pred EEEecCCCCCCCCcchhhccC-------------CC----------CCCCCeeeecCCCccccccccCcccceecccccc
Confidence 999999999999999965431 21 25689999999999 9999999999999999999
Q ss_pred CchHHHHHHhHhhccC
Q 042201 481 MNAAFVGSVAPLLAQS 496 (511)
Q Consensus 481 ~NA~~v~~la~l~~~~ 496 (511)
|||+|+++++++....
T Consensus 550 ~nA~~v~~la~~~~~~ 565 (639)
T 1clc_A 550 WNAALIYALAGFVNYN 565 (639)
T ss_dssp HHHHHHHHHHTTTTCC
T ss_pred chHHHHHHHHHhhhcc
Confidence 9999999999987653
No 9
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=100.00 E-value=1.3e-95 Score=802.59 Aligned_cols=431 Identities=20% Similarity=0.262 Sum_probs=357.6
Q ss_pred CchHHHHHHHHHHHHHHHHhhcCC---CCCCCCCCccCCC-CCC--------C--------------CCCCcccccccee
Q 042201 36 TTTFAYRDALGKAILFFEGQRSGK---LPESQRVKWRGNS-ALS--------D--------------GKPENVNLIGGYY 89 (511)
Q Consensus 36 ~~~~~Y~~~l~~sl~fy~~QR~G~---lp~~~~~~w~~~s-~~~--------D--------------g~~~~~DlsGGWy 89 (511)
|++++|.++|+++|+||++||||. +|...++.|++++ |.. | |.+.++||+||||
T Consensus 96 I~~~~Y~~~l~~sl~ff~~QRsG~~~~~p~~~~~~w~r~a~h~~~~~~~g~~D~~~~p~~~~~~~~~g~~~~~Dl~GGwy 175 (609)
T 1ut9_A 96 IRKDIYTQMKYDALAFFYHKRSGIPIEMPYAGGEQWTRPAGHIGIEPNKGDTNVPTWPQDDEYAGIPQKNYTKDVTGGWY 175 (609)
T ss_dssp ECTTTTTTHHHHHHHHHHHTBSSSCBCTTTTSSGGGCBCCSSSSCTTCBCSSSEEBCCTTSTTCCSCCCCCEECCCCSBC
T ss_pred eCHHHHHHHHHHHHHHHHHHhcCCcccCcccCCccccccccCccccccccccccccccccccccccCCCCceecCCCCee
Confidence 678899999999999999999995 5666677898764 443 3 3467899999999
Q ss_pred cCCCCcccccchHHHHHHHHHHHHHcHH-------HH--------hcccchhHHHHHHHHHHHHHHhccCCCC---eEEE
Q 042201 90 DAGDNVKFGWPMAYSVSLLSWAAVEYQR-------EI--------SSVNQLGYLRGAIRWGTDFILRAHTSPT---TLYT 151 (511)
Q Consensus 90 DAGD~~Ky~~~~a~s~~~L~~~~~e~~~-------~~--------~s~n~~pdiLdE~kwg~D~llkm~~~~g---~~y~ 151 (511)
|||||+||++|+++++++|++.|+.++. .| +++|++||||||||||+|||||||..+| .+|.
T Consensus 176 DAGD~~K~~~p~a~t~~~ll~~ye~~~~~~~~~~~~~~~~~~~iPes~n~~~d~ldeikwg~D~llk~q~~~g~~~~~~g 255 (609)
T 1ut9_A 176 DAGDHGKYVVNGGIAVWTLMNMYERAKIRGLDNWGPYRDGGMNIPEQNNGYPDILDEARWEIEFFKKMQVTEKEDPSIAG 255 (609)
T ss_dssp CSSSSCEEHHHHHHHHHHHHHHHHHHHHTTCTTSGGGSTTSSSSTTTTSSSCHHHHHHHHHHHHHHHHBCCTTTCGGGTT
T ss_pred eCCCCCeecCchHHHHHHHHHHHHHhhhccccchhhhccccccCccccCcHHHHHHHHHHHHHHHHHhccCCCCcceEEE
Confidence 9999999999999999988888887653 23 4679999999999999999999998776 6778
Q ss_pred EcCCCCCCCCCC---CCCCCCCCCceEEEeCCCCcchHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHhcC
Q 042201 152 QVGDGNADHQCW---ERPEDMDTPRTLYRITSDSPGSEAAAESAAALAAASIVFKKVDSIYSSRLLNHSKSLFEFADKHR 228 (511)
Q Consensus 152 ~Vg~~~~dh~~w---~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~as~vfk~~D~~yA~~~l~~A~~a~~~a~~~~ 228 (511)
||+++..||..| .+||+++.+|++. .|+|++++++|||||+||||||++||+||++||++||++|+||++||
T Consensus 256 ~v~~~~~D~~w~g~~~~Pe~~~~~R~~~-----~p~t~~~~~~AAalAaas~vfk~~d~~ya~~~L~~A~~~~~fa~~~~ 330 (609)
T 1ut9_A 256 MVHHKIHDFRWTALGMLPHEDPQPRYLR-----PVSTAATLNFAATLAQSARLWKDYDPTFAADCLEKAEIAWQAALKHP 330 (609)
T ss_dssp CEECEEEESSCCCSSCCGGGCCSBEEEC-----CEEHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHCT
T ss_pred EecCCCCCcccCCCCCChhhCCCceeec-----CCCcHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHhCc
Confidence 888877788656 5899999999873 48999999999999999999999999999999999999999999999
Q ss_pred CCccC--------CCCccCCCCcchhHHHHHHHHHHHHcCChhHHHHHHHccCC------C-----------CCCcccCc
Q 042201 229 GSYQA--------SCPFYCSYSGYQDELLWAAAWLYKASEDNKYLDYVLSNQGW------S-----------QVASEFSW 283 (511)
Q Consensus 229 ~~y~~--------~~~~Y~s~~~~~De~~wAAaeLy~aTg~~~Yl~~a~~~~~~------~-----------~~~~~~~W 283 (511)
+.|.+ .+++|++ +++.||++|||+|||++|||.+|+++++++... . .....|+|
T Consensus 331 ~~y~~~~~~~~~~~~~~Y~s-s~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~W 409 (609)
T 1ut9_A 331 DIYAEYTPGSGGPGGGPYND-DYVGDEFYWAACELYVTTGKDEYKNYLMNSPHYLEMPAKMGENGGANGEDNGLWGCFTW 409 (609)
T ss_dssp TCCBCCCCSSSSCBSCCCCB-SCCHHHHHHHHHHHHHHHCCHHHHHHHHTSTTTTCCCSBCC----SSGGGTTCBSSCCS
T ss_pred ccccccccccCccCCCCCCC-CCcccHHHHHHHHHHHHhCCHHHHHHHHHhhhcccchhhhccccccccccccCccccch
Confidence 98754 3679999 899999999999999999999999999986420 0 11236999
Q ss_pred ChhhHHHHhhcccc--ccCCc--hH-HHHHHHHHHHHHHhhcCCC---CCcccccCCCCceeecCCChHHHHHHHHHHHH
Q 042201 284 DNKFAGAQMLLAKE--FFGGN--KQ-LSLFKIHVESFVCALMPES---SSVRIETTPGGLLYIRDSSNLQYVTSATLLLF 355 (511)
Q Consensus 284 d~~~~g~~~lla~~--~~~~~--~~-~~~~~~~ad~~~~~~~~~~---~~~~~~~t~~g~~w~~~w~n~~~a~n~a~l~~ 355 (511)
|++..+++++|+.. .+.+. ++ ++.+++.+|.|+|...+.. |+....+||+||. ||+++|++|.+|+++
T Consensus 410 d~~~~~~~~lla~~~~~l~~~~~~~~~~~~~~~ad~~~~~~~~~~~g~~~~~~~~t~gg~~----WGs~~~~~n~a~~~~ 485 (609)
T 1ut9_A 410 GTTQGLGTITLALVENGLPATDIQKARNNIAKAADRWLENIEEQGYRLPIKQAEDERGGYP----WGSNSFILNQMIVMG 485 (609)
T ss_dssp SCCHHHHHHHHHHSCCSSCHHHHHHHHHHHHHHHHHHHHHHHTCTTCCSCCCCSSSSCSCC----TTHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCccccccccCCCCcc----cccCHHHHHHHHHHH
Confidence 99999998887732 22221 22 6778889999998654432 3333445678875 579999999999987
Q ss_pred HHHHHhhhcccCccccCCCCCCHHHHHHHHHhccchhccCCCCCcceEeecCCCCCCCccccCCCCCCCCCCC-CccccC
Q 042201 356 LYSKTLNTAHINGLQCGSAHFSASQISAFAKSQVDYILGKNPMKMSYMAGFGSKFPLQIHHRGASIPSIGAHP-AKVSCN 434 (511)
Q Consensus 356 ~ya~~l~~~~~~~~~~g~~~~~~~~y~~~a~~qldYlLG~Np~~~SyVtG~G~~~p~~phHR~ss~~~~~~~p-~~~~c~ 434 (511)
++.++ + ...+|+++|++|||||||+||+++|||||||+|+|++||||+++.+.....| +..+|.
T Consensus 486 ~a~~~-~--------------~~~~y~~~A~~qidYiLG~NP~~~SyVvG~G~~~p~~pHHR~~s~~~~~~~~~~~~G~l 550 (609)
T 1ut9_A 486 YAYDF-T--------------GDSKYLDGMFDGISYLLGRNAMDQSYVTGYGERPLQNPHDRFWTPQTSKRFPAPPPGII 550 (609)
T ss_dssp HHHHH-H--------------CCTHHHHHHHHHHHHHBTCSTTCCBCBBTCSSSCBCCCBCSSSCTTTCTTSCCCCSSCB
T ss_pred HHHHh-c--------------ChHHHHHHHHHHHHhccCCCCCCceEEEecCCCCCCCCccccccccccccCCCCCCCCC
Confidence 76554 2 2458999999999999999999999999999999999999986654322222 336786
Q ss_pred CCCccccCCCCCCCCCcccceecCCCCCCCcccCcCccccCcccccCchHHHHHHhHhhcc
Q 042201 435 DGYSSYYHSSNPNPNVHVGAIVGGPDSNDQFKDLRTDYSHAEPTTYMNAAFVGSVAPLLAQ 495 (511)
Q Consensus 435 ~g~~~~~~~~~pn~~~~~GalvGGPn~~~~y~D~~~~y~~nEvaid~NA~~v~~la~l~~~ 495 (511)
.|. .+++.|||++ .|++||||+..++|.|+|++|++|||||||||+||++||+|.+.
T Consensus 551 ~Gg---p~~~~~dp~~-~ga~vggp~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~ 607 (609)
T 1ut9_A 551 SGG---PNSRFEDPTI-NAAVKKDTPPQKCFIDHTDSWSTNEITVNWNAPFAWVTAYLDQY 607 (609)
T ss_dssp CCC---CCTTCCSHHH-HHHSCTTCCGGGCCCCCTTCHHHHBCCHHHHHHHHHHHHHHHHH
T ss_pred CCC---CCCCCCCccc-ccccCCCCccccCcCccccccccccceecchHHHHHHHHHHHhh
Confidence 553 4566788777 89999999999999999999999999999999999999999754
No 10
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.3e-65 Score=554.72 Aligned_cols=388 Identities=20% Similarity=0.294 Sum_probs=280.8
Q ss_pred CchHHH-HHHHHHHHHHHHHhhcCCC--CCCCCCCccCCCCCCCCCCCccccccceecC-CCCcccccchHHHH------
Q 042201 36 TTTFAY-RDALGKAILFFEGQRSGKL--PESQRVKWRGNSALSDGKPENVNLIGGYYDA-GDNVKFGWPMAYSV------ 105 (511)
Q Consensus 36 ~~~~~Y-~~~l~~sl~fy~~QR~G~l--p~~~~~~w~~~s~~~Dg~~~~~DlsGGWyDA-GD~~Ky~~~~a~s~------ 105 (511)
|++++| .++|+++|+||++||||.+ |.+.+++|+++ +.++||+|||||| |||+||++|+|+|+
T Consensus 91 I~~~vy~~~~l~~sl~ff~~QRsG~~~~~~d~~~~~~~~-------~~~~Dl~GGwyDAsGD~~Ky~~~~a~t~~~npqQ 163 (586)
T 3h7l_A 91 VGEHILLNQTLSDVIHYFKSQRCGGVFDQQDRQVPVLNA-------NQTADVHGGWYDASGDVSKYLSHLSYANYLNPQQ 163 (586)
T ss_dssp EETTHHHHHHHHHHHHHHHHTBCCHHHHHHTTSEEETTT-------TEEECCCCSBCSBTTBCCEESCCCGGGSSCCCCC
T ss_pred EccchhhHHHHHHHHHHHHHhcCCCCCCCCCceeeecCC-------CceeecccccccCCCCcceeccchhhhhhcccch
Confidence 688997 8999999999999999974 56778889863 5789999999999 99999999999887
Q ss_pred -HHHHHHHHHcHHHHhcc-----cchhHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCCCCCCCCCCCCCCCCceE--EE
Q 042201 106 -SLLSWAAVEYQREISSV-----NQLGYLRGAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTL--YR 177 (511)
Q Consensus 106 -~~L~~~~~e~~~~~~s~-----n~~pdiLdE~kwg~D~llkm~~~~g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~~--~~ 177 (511)
.+|+|+++++.+.+... .++||||||||||+|||||||+++|.||+|||++ |..+ +++|.+ +.
T Consensus 164 ~~~~~w~ll~~~~~~~~~~~~~~~~~~~lldE~rWg~D~llkm~~~~g~~y~qVgd~------W~~d---~~~R~~~~~~ 234 (586)
T 3h7l_A 164 TPMVVWNILKGLSLLEGSEDIAAFTRTRLIEEALFGADFLVRMQNEKGFFYMTVFDK------WSKD---TAQREICAYE 234 (586)
T ss_dssp HHHHHHHHHHHHHHSTTSSSSCHHHHHHHHHHHHHHHHHHHHTBCTTSCBBCEEECT------TCCC---GGGCEEEEEE
T ss_pred hhHHHHHHHHHHHHhhhhccCcccchHHHHHHHHHHHHHHHhcccCCCeEEEEecCC------CCCC---CCcccccccc
Confidence 47888888776666432 2389999999999999999999999999999984 6422 556765 32
Q ss_pred eCCCCc-------chHHHHHHHHHHHHhccccccCCHHH-HHHHHHHHHHHHHHHHhcCCCccCCCCccCCCCcchhHH-
Q 042201 178 ITSDSP-------GSEAAAESAAALAAASIVFKKVDSIY-SSRLLNHSKSLFEFADKHRGSYQASCPFYCSYSGYQDEL- 248 (511)
Q Consensus 178 ~~~~~p-------~s~~a~~~AAalA~as~vfk~~D~~y-A~~~l~~A~~a~~~a~~~~~~y~~~~~~Y~s~~~~~De~- 248 (511)
+....| .+..++++|||||+|||||+ |++| +++||++|+++|+|+++||+.|... .+ +++.||+
T Consensus 235 ~~~~~~~~~y~~~~~~~agl~aAALA~Asrvf~--d~~~~a~~~L~aA~~a~~fa~~~~~~y~~~----g~-~~~~De~~ 307 (586)
T 3h7l_A 235 TQLGHKFDDYQAGFRQGGGVAIAALAAASRLGV--HGEYDQQKYRNAAENGYWHLKEHNTQYLND----GE-ENIIDEYC 307 (586)
T ss_dssp TTTTEEESCCBCCGGGTHHHHHHHHHHHTTSSS--CSSSCHHHHHHHHHHHHHHHHHHHHHHSTT----SC-CCHHHHHH
T ss_pred CCCCCCCcceecCCCCcHHHHHHHHHHHhcccC--CCCcChHHHHHHHHHHHHHHHhcCccccCC----CC-ccchhHHH
Confidence 211111 13457789999999999998 7889 9999999999999999998776532 23 6789999
Q ss_pred -HHHHHHHHHHcCChhHHHHHHHcc----C--CCCCCcccCcCh-----------hhHHHH-hhcccc-ccCC----chH
Q 042201 249 -LWAAAWLYKASEDNKYLDYVLSNQ----G--WSQVASEFSWDN-----------KFAGAQ-MLLAKE-FFGG----NKQ 304 (511)
Q Consensus 249 -~wAAaeLy~aTg~~~Yl~~a~~~~----~--~~~~~~~~~Wd~-----------~~~g~~-~lla~~-~~~~----~~~ 304 (511)
+|||+|||++||+.+||++++.+. . .......+.|.. ...++. +.|+.. ...+ .++
T Consensus 308 ~~WAA~eLy~ATgd~~YL~~a~~~a~~l~~~~~~~~~~g~~w~~~d~~~r~~~d~a~~gl~~iaLl~l~~~~~d~~~~~~ 387 (586)
T 3h7l_A 308 ALLASVELFKATKETRYLEESRLWAQRLVARQMSDEQIQHFWSANQDGSRPYFHAAEAGLPTIALCEYLAIEDDSVQTES 387 (586)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTEECCSSCSSEEBSSSSSSSBCCCTTTTTHHHHHHHHHHHHCCSTTTTHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccCCccCCCcCCCcccCCcccccccccHHHHHHHHHhhhhcCChHHHHH
Confidence 999999999999999999998753 1 112234577763 122222 112111 1122 122
Q ss_pred -HHHHHHHHHHHHHhhc--CCCCCc-----------------ccccCC-CCceeecCC-ChHHHHHHHHHHHHHHHHHhh
Q 042201 305 -LSLFKIHVESFVCALM--PESSSV-----------------RIETTP-GGLLYIRDS-SNLQYVTSATLLLFLYSKTLN 362 (511)
Q Consensus 305 -~~~~~~~ad~~~~~~~--~~~~~~-----------------~~~~t~-~g~~w~~~w-~n~~~a~n~a~l~~~ya~~l~ 362 (511)
++.+++.++.++ .+. ..|||+ .+++.+ ++|. | |++++++|.+++++++++++.
T Consensus 388 a~~~i~~~~d~~l-~~~~~~~npfg~~~~~~~~~~~~~~~~y~~p~~~~~~y~----WqGsN~~~an~a~~~~~a~~~~~ 462 (586)
T 3h7l_A 388 VKCIVNRACEFEI-KISNKVTNPFGYPRQYVKGVNESKRDAFFVAHNNESGYW----WQGENARLGSLATMAYLAQPHIA 462 (586)
T ss_dssp HHHHHHHHHHHHH-HHHHSSCCSSCCCCEEECCTTSCCEEESSCCSSSTTSSC----CCCCHHHHHHHHHHHHHSGGGCC
T ss_pred HHHHHHHHhhhhh-hhcccccCccccHHHHhhhhccccccccccccCCCCCCe----eeChHHHHHHHHHHHHHHHHhcC
Confidence 555666666444 222 234442 122222 3454 5 667778888888887766532
Q ss_pred hcccCccccCCCCCCHHHHHHHHHhccchhccCCCCCcceEeecCCCCCCCccccCCCCCCCCCCCCccccCCCCccccC
Q 042201 363 TAHINGLQCGSAHFSASQISAFAKSQVDYILGKNPMKMSYMAGFGSKFPLQIHHRGASIPSIGAHPAKVSCNDGYSSYYH 442 (511)
Q Consensus 363 ~~~~~~~~~g~~~~~~~~y~~~a~~qldYlLG~Np~~~SyVtG~G~~~p~~phHR~ss~~~~~~~p~~~~c~~g~~~~~~ 442 (511)
+. ..+.+|+++|++|||||||+||+++|||||||+|+|+ ||.+. + +
T Consensus 463 ~~-----------~~~~~y~~~a~~qldyiLG~Np~~~s~v~G~G~~~p~---~r~~~---------------~----~- 508 (586)
T 3h7l_A 463 SQ-----------EIQQQLSVFAQDALNWIVGLNPYDMCMLDGHGRNNPD---YLPQY---------------G----F- 508 (586)
T ss_dssp CH-----------HHHHHHHHHHHHHHHHHBTCSTTCCBCBTTSSSCCCC---SBGGG---------------T----B-
T ss_pred Cc-----------hhHHHHHHHHHHhhhhhccCCCCCCccEEeeCCCCCc---cCccc---------------C----C-
Confidence 10 0247899999999999999999999999999999887 67531 1 1
Q ss_pred CCCCCCCCcccceecCCCCC--C----------CcccCcCccccCcccccCchHHHHHHhH
Q 042201 443 SSNPNPNVHVGAIVGGPDSN--D----------QFKDLRTDYSHAEPTTYMNAAFVGSVAP 491 (511)
Q Consensus 443 ~~~pn~~~~~GalvGGPn~~--~----------~y~D~~~~y~~nEvaid~NA~~v~~la~ 491 (511)
| .+||.||||||+. | +..|...+|.-+|-.|---|=|..+++.
T Consensus 509 ---~---~~pG~i~gG~~~g~~D~~~ia~~~~~~~~~~~~~wrw~eqw~ph~~w~l~a~~~ 563 (586)
T 3h7l_A 509 ---F---NAKGGVCNGITGGFEDEEDIAFNPPAQKDDMLQNWRWGEQWIPHGAWYLLAIMS 563 (586)
T ss_dssp ---C---CCTTCBBCCCEECSSCTTSEESSCTTTTTCTTTTHHHHCBBHHHHHHHHHHHHH
T ss_pred ---C---CCCccccCCCCCCcCChhhHhcCccccccccccCcccHhhccchHHHHHHHHHH
Confidence 1 2689999999853 1 2345677999999888765555444443
No 11
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=95.85 E-value=0.032 Score=57.74 Aligned_cols=141 Identities=17% Similarity=0.175 Sum_probs=79.4
Q ss_pred cccccchHHHHHHHHHHHHHcHHHHhcccchhHHHHHHHHHHHHHHhc-cCCC-CeEEEEcCCCCCCCCCCCCCCCCCCC
Q 042201 95 VKFGWPMAYSVSLLSWAAVEYQREISSVNQLGYLRGAIRWGTDFILRA-HTSP-TTLYTQVGDGNADHQCWERPEDMDTP 172 (511)
Q Consensus 95 ~Ky~~~~a~s~~~L~~~~~e~~~~~~s~n~~pdiLdE~kwg~D~llkm-~~~~-g~~y~~Vg~~~~dh~~w~~Pe~~~~~ 172 (511)
.|.+.-.+--++.++.++.. -+.|+.|+.++-+++||++- ...+ |++|..+-++ .|.+ .+
T Consensus 48 ~k~l~~n~r~i~~~a~a~~~--------~g~~~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~~dG--------~~~~--~~ 109 (402)
T 3gt5_A 48 HRHLVSSTRFVFNYAMAYLQ--------FGTAEYLDAVHHGLSYVRDVHRNPATGGYAWTLCDD--------RVED--DT 109 (402)
T ss_dssp EEEHHHHHHHHHHHHHHHHH--------HCCHHHHHHHHHHHHHHHHTTBCTTTSCBCSEEETT--------EEEE--CC
T ss_pred chhHHHHHHHHHHHHHHHHh--------hCChHHHHHHHHHHHHHHHhCccCCCCcEEEEeeCC--------CCCc--CC
Confidence 45555445555554444322 15699999999999999984 4444 7787777221 1110 11
Q ss_pred ceEEEeCCCCcchHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHhc---C--CCccC-CCCc--cCCCCcc
Q 042201 173 RTLYRITSDSPGSEAAAESAAALAAASIVFKKVDSIYSSRLLNHSKSLFEFADKH---R--GSYQA-SCPF--YCSYSGY 244 (511)
Q Consensus 173 R~~~~~~~~~p~s~~a~~~AAalA~as~vfk~~D~~yA~~~l~~A~~a~~~a~~~---~--~~y~~-~~~~--Y~s~~~~ 244 (511)
+.+| .-+-++-||+.+ . +..|+ ++|+.|++++++.+++ | +.|.+ ..+. -......
T Consensus 110 ~~ly----------d~Af~i~al~~~-~--~tgd~----~~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~~~~~~~~ 172 (402)
T 3gt5_A 110 NHCY----------GLAFVMLAYSCG-L--KVGIK----QAREWMDETWCLLERHFWDAEYGLYKDEADAQWNFTRYRGQ 172 (402)
T ss_dssp EEHH----------HHHHHHHHHHHH-H--HTTCT----THHHHHHHHHHHHHHHTEETTTTEECCEECTTCCBCSCEEH
T ss_pred cchH----------HHHHHHHHHHHH-H--HhCCh----hHHHHHHHHHHHHHHHhcCCcCCCchhhhCCCCCCCCCCCC
Confidence 2221 112223334432 2 23456 5788899999998876 2 33321 0000 0000112
Q ss_pred hhH--HHHHHHHHHHHcCChhHHHHHHH
Q 042201 245 QDE--LLWAAAWLYKASEDNKYLDYVLS 270 (511)
Q Consensus 245 ~De--~~wAAaeLy~aTg~~~Yl~~a~~ 270 (511)
.+- ++-|.+.||++||++.|++.+.+
T Consensus 173 n~~m~l~eall~L~~~tgd~~~~~~a~~ 200 (402)
T 3gt5_A 173 NANMHMCEAMLAAYEASGEQRYLERALV 200 (402)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 222 56789999999999999998765
No 12
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=95.67 E-value=1.3 Score=44.89 Aligned_cols=110 Identities=13% Similarity=-0.029 Sum_probs=69.9
Q ss_pred HHHH-HhccCCCCeEEEEcCCCCCCCCCCCCCCCCCCCceEEEeCCCCcchHHHHHHHHHHHHhccc-cccCCHHHHHHH
Q 042201 136 TDFI-LRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALAAASIV-FKKVDSIYSSRL 213 (511)
Q Consensus 136 ~D~l-lkm~~~~g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~as~v-fk~~D~~yA~~~ 213 (511)
+.|. .++++..|+||+.+.. |.. ..|. .......+.++.++|.|+++ ++ +| .+
T Consensus 21 l~fw~~~~~D~~GGf~~~~~~---d~~--~~~~--------------eK~l~~nar~i~~~a~a~~~~~~--~~----~~ 75 (388)
T 2gz6_A 21 LPFWENHSLDSEGGYFTCLDR---QGK--VYDT--------------DKFIWLQNRQVWTFSMLCNQLEK--RE----NW 75 (388)
T ss_dssp HHHHHHHCBCTTSSBCCEEBT---TSC--EEEC--------------CEEHHHHHHHHHHHHHHHHHTCC--CH----HH
T ss_pred HHHHHhcCCCCCCCEEeEECC---CCC--cCCc--------------chhHHHHHHHHHHHHHHHHHhcC--CH----HH
Confidence 3445 5576557788888854 221 1111 12344568999999999998 55 45 68
Q ss_pred HHHHHHHHHHHHhc---C-C-CccC---CCCccCCCCcch-h--HHHHHHHHHHHHcCChhHHHHHHHc
Q 042201 214 LNHSKSLFEFADKH---R-G-SYQA---SCPFYCSYSGYQ-D--ELLWAAAWLYKASEDNKYLDYVLSN 271 (511)
Q Consensus 214 l~~A~~a~~~a~~~---~-~-~y~~---~~~~Y~s~~~~~-D--e~~wAAaeLy~aTg~~~Yl~~a~~~ 271 (511)
++.|++..+|..++ | + .|.. .+..-.. .... | -+++|.+++|++||++.|++.+++.
T Consensus 76 ~~~A~~~~~~l~~~~~~~~Gg~~~~~d~dg~~~~~-~~~~~~~af~i~al~~~y~~tg~~~~l~~A~~~ 143 (388)
T 2gz6_A 76 LKIARNGAKFLAQHGRDDEGNWYFALTRGGEPLVQ-PYNIFSDCFAAMAFSQYALASGEEWAKDVAMQA 143 (388)
T ss_dssp HHHHHHHHHHHHHHSBCTTSCBCSEECTTSCBCCC-CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcccC-CcchHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 89999999999987 1 1 2221 0100000 1111 2 2578899999999999999988764
No 13
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=95.55 E-value=0.057 Score=55.12 Aligned_cols=120 Identities=9% Similarity=0.041 Sum_probs=76.8
Q ss_pred chhHHHHHHHHHHHHHHhc-cCCCCeEEEEcCCCCCCCCCCCCCCCCCCCceEEEeCCCCcchHHHHHHHHHHHHhcccc
Q 042201 124 QLGYLRGAIRWGTDFILRA-HTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALAAASIVF 202 (511)
Q Consensus 124 ~~pdiLdE~kwg~D~llkm-~~~~g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~as~vf 202 (511)
+-|+.++.++-+++||++- +..+|++|+.+.. |. .|.+ .++. ...-+-++.+|+.++++.
T Consensus 71 ~~~~~~~~A~~~~~~l~~~~~~~~Gg~~~~~d~---dg----~~~~--~~~~----------~~~~af~i~al~~~y~~t 131 (388)
T 2gz6_A 71 KRENWLKIARNGAKFLAQHGRDDEGNWYFALTR---GG----EPLV--QPYN----------IFSDCFAAMAFSQYALAS 131 (388)
T ss_dssp CCHHHHHHHHHHHHHHHHHSBCTTSCBCSEECT---TS----CBCC--CCCC----------HHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcC---CC----Cccc--CCcc----------hHHHHHHHHHHHHHHHHh
Confidence 5689999999999999995 5557888887731 11 1211 0111 223456777888778876
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHhcC----CCccC---CCCccCCCCcchh--HHHHHHHHHHHHcCChhHHHHHHHc
Q 042201 203 KKVDSIYSSRLLNHSKSLFEFADKHR----GSYQA---SCPFYCSYSGYQD--ELLWAAAWLYKASEDNKYLDYVLSN 271 (511)
Q Consensus 203 k~~D~~yA~~~l~~A~~a~~~a~~~~----~~y~~---~~~~Y~s~~~~~D--e~~wAAaeLy~aTg~~~Yl~~a~~~ 271 (511)
. |+ ++|+.|++++++..++- +.+.. ....+ .+..+ -++.|.+.||++|+++.|++.+.+.
T Consensus 132 g--~~----~~l~~A~~~~~~i~~~~~d~~g~~~~~~~~~~~~---~~~~~~~~~~~all~l~~~t~d~~~~~~A~~~ 200 (388)
T 2gz6_A 132 G--EE----WAKDVAMQAYNNVLRRKDNPKGKYTKTYPGTRPM---KALAVPMILANLTLEMEWLLPQETLENVLAAT 200 (388)
T ss_dssp C--CH----HHHHHHHHHHHHHHTC--------------CCCC---EETHHHHHHHHHHHHTGGGSCHHHHHHHHHHH
T ss_pred C--CH----HHHHHHHHHHHHHHHHhcCCCcccCcccCCCCCC---CCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 4 45 67888999999888762 22211 00111 11122 3577889999999999999987653
No 14
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=95.49 E-value=0.19 Score=51.10 Aligned_cols=118 Identities=10% Similarity=0.014 Sum_probs=75.3
Q ss_pred chhHHHHHHHHHHHHH-HhccCC--CCeEEEEcCCCCCCCCCCCCCCCCCCCceEEEeCCCCcchHHHHHHHHHHHHhcc
Q 042201 124 QLGYLRGAIRWGTDFI-LRAHTS--PTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALAAASI 200 (511)
Q Consensus 124 ~~pdiLdE~kwg~D~l-lkm~~~--~g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~as~ 200 (511)
+-|..|+.++-..++| .+-..+ .|+++-++. +..++. +-..+.++.++|..++
T Consensus 109 ~~~~yL~~A~~l~~~l~~~~wd~~~gGGi~W~~~------------------~~~~kn------aisN~~~~~~la~l~~ 164 (349)
T 3k7x_A 109 GKSIYLEDAQLVWQDLVDTGWNDIMGGGFAWRRP------------------QMYYKN------TPVNAPFIILSCWLYN 164 (349)
T ss_dssp CCHHHHHHHHHHHHHHHHHTBCSGGGSCBEEETT------------------EEEEEE------HHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHhCCCCCCCCceEecCC------------------Cccccc------hhhHHHHHHHHHHHHH
Confidence 5688999999999998 444332 245443331 122331 2245667777777788
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHhc---C-CCccC-CC---CccCC-CCcch---hHHHHHHHHHHHHcCChhHHHHH
Q 042201 201 VFKKVDSIYSSRLLNHSKSLFEFADKH---R-GSYQA-SC---PFYCS-YSGYQ---DELLWAAAWLYKASEDNKYLDYV 268 (511)
Q Consensus 201 vfk~~D~~yA~~~l~~A~~a~~~a~~~---~-~~y~~-~~---~~Y~s-~~~~~---De~~wAAaeLy~aTg~~~Yl~~a 268 (511)
++. |+ ++++.|+++|+|.+++ + +.+.+ .. .-... ...|. --++.++++||++||+++||+.+
T Consensus 165 ~tg--d~----~Yl~~A~~~~~w~~~~l~d~~g~v~Dg~~~~~~g~~~~~~~~tYnqg~~l~g~~~LY~~T~d~~yl~~a 238 (349)
T 3k7x_A 165 ELN--ET----KYLEWAMKTYEWQTKVLVREDGFVEDGINRLEDGTIDYEWKFTYNQGVYIGANLELYRITKEAIYLDTA 238 (349)
T ss_dssp HHC--CH----HHHHHHHHHHHHHHHHHBCTTSCBCCEECTTSSSCBCTTCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred HhC--CH----HHHHHHHHHHHHHHhcCCCCCCeEecCCccCCCCccCCcCeeeHHHHHHHHHHHHHHHhhCcHHHHHHH
Confidence 775 45 7999999999999885 2 22222 10 00000 01122 24899999999999999999988
Q ss_pred HHc
Q 042201 269 LSN 271 (511)
Q Consensus 269 ~~~ 271 (511)
.+.
T Consensus 239 ~~l 241 (349)
T 3k7x_A 239 NKT 241 (349)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 15
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=93.25 E-value=0.15 Score=52.55 Aligned_cols=117 Identities=12% Similarity=0.049 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHH-hccCCCCeEEEEcCCCCCCCCCCCCCCCCCCCceEEEeCCCCcchHHHHHHHHHHHHhccccccCC
Q 042201 128 LRGAIRWGTDFIL-RAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALAAASIVFKKVD 206 (511)
Q Consensus 128 iLdE~kwg~D~ll-km~~~~g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~as~vfk~~D 206 (511)
+..|+.--+.|.+ ++.++.|+||..++. |. .|.. ..+ ...-..+.++.++|.|+++++ +
T Consensus 11 l~~~~~~~l~fw~~~~~D~~GGf~~~l~~---dg----~~~~-~~~----------k~l~~n~r~i~~~a~a~~~~g--~ 70 (402)
T 3gt5_A 11 LRTHISDTMAFYHPRCIDSAGGFFHYFRD---DG----SIYN-ATH----------RHLVSSTRFVFNYAMAYLQFG--T 70 (402)
T ss_dssp HHHHHHHHHHHHTTTTBCTTSSBCCEECT---TS----CEEE-SSE----------EEHHHHHHHHHHHHHHHHHHC--C
T ss_pred HHHHHHHHHHHHHhcCCCCCcCeeeEECC---CC----CCCC-CCc----------hhHHHHHHHHHHHHHHHHhhC--C
Confidence 5567777788775 566677888877753 21 1110 011 123456899999999999885 4
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccCC-CCccCC--------CCcchhH---HHHHHHHHHHHcCChhHHHHHHHc
Q 042201 207 SIYSSRLLNHSKSLFEFADKHRGSYQAS-CPFYCS--------YSGYQDE---LLWAAAWLYKASEDNKYLDYVLSN 271 (511)
Q Consensus 207 ~~yA~~~l~~A~~a~~~a~~~~~~y~~~-~~~Y~s--------~~~~~De---~~wAAaeLy~aTg~~~Yl~~a~~~ 271 (511)
| .+++.|+++++|..++- +... +++|.+ .....++ .++|.++ |.+||++.|++.+++.
T Consensus 71 ~----~~l~~A~~~~~fl~~~~--~d~~~Gg~~~~~~dG~~~~~~~~lyd~Af~i~al~~-~~~tgd~~~l~~A~~l 140 (402)
T 3gt5_A 71 A----EYLDAVHHGLSYVRDVH--RNPATGGYAWTLCDDRVEDDTNHCYGLAFVMLAYSC-GLKVGIKQAREWMDET 140 (402)
T ss_dssp H----HHHHHHHHHHHHHHHTT--BCTTTSCBCSEEETTEEEECCEEHHHHHHHHHHHHH-HHHTTCTTHHHHHHHH
T ss_pred h----HHHHHHHHHHHHHHHhC--ccCCCCcEEEEeeCCCCCcCCcchHHHHHHHHHHHH-HHHhCChhHHHHHHHH
Confidence 5 78999999999998851 1111 222211 0112222 5688999 8889999999988753
No 16
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=93.03 E-value=0.39 Score=49.65 Aligned_cols=122 Identities=13% Similarity=0.046 Sum_probs=72.5
Q ss_pred chhHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCCCCCCCCCCCCCCCCceEEEeCCCCcchHHHHHHHHHHHHhccccc
Q 042201 124 QLGYLRGAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALAAASIVFK 203 (511)
Q Consensus 124 ~~pdiLdE~kwg~D~llkm~~~~g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~as~vfk 203 (511)
+-++.++.+.=.+|+|+.-....+++....+.. +.|+ +.+ ..|+ +.+.+.+|+-|++++.
T Consensus 131 g~~~~~~~~~~aA~~L~~r~~~~~g~iqsw~~~-------~~~~----~~~-~iID--------~~mni~~L~~A~~~~g 190 (397)
T 2zzr_A 131 GDVKALEATIKAADKLMERYQEKGGFIQAWGEL-------GYKE----HYR-LIID--------CLLNIQLLFFAYEQTG 190 (397)
T ss_dssp CCHHHHHHHHHHHHHHHTTEETTTTEECCSSST-------TCGG----GCE-EETT--------HHHHTHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHHhCcCCCEEEecccC-------CCCC----CCc-eeec--------hHhHHHHHHHHHHHhC
Confidence 346788888888999987543443333323210 1111 122 2343 3557899999999986
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHhc--C--C-CccC------CCCcc--CCCCcchhH---------HHHHHHHHHHHcCC
Q 042201 204 KVDSIYSSRLLNHSKSLFEFADKH--R--G-SYQA------SCPFY--CSYSGYQDE---------LLWAAAWLYKASED 261 (511)
Q Consensus 204 ~~D~~yA~~~l~~A~~a~~~a~~~--~--~-~y~~------~~~~Y--~s~~~~~De---------~~wAAaeLy~aTg~ 261 (511)
||. +++.|++..++..++ + + .|+. .+... ....++.|| .++|.++||++|+|
T Consensus 191 --d~~----y~~~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d 264 (397)
T 2zzr_A 191 --DEK----YRQVAVNHFYASANNVVRDDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKD 264 (397)
T ss_dssp --CHH----HHHHHHHHHHHHHHHTBCTTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCC
T ss_pred --CHH----HHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCC
Confidence 575 555555555555554 1 1 1221 11111 011456565 58899999999999
Q ss_pred hhHHHHHHHc
Q 042201 262 NKYLDYVLSN 271 (511)
Q Consensus 262 ~~Yl~~a~~~ 271 (511)
..||+.+++.
T Consensus 265 ~~yL~~A~~l 274 (397)
T 2zzr_A 265 YQQIILFKGM 274 (397)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 17
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=91.84 E-value=0.66 Score=47.59 Aligned_cols=121 Identities=14% Similarity=0.036 Sum_probs=72.2
Q ss_pred hHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCCCCCCCCCCCCCCCCceEEEeCCCCcchHHHHHHHHHHHHhccccccC
Q 042201 126 GYLRGAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALAAASIVFKKV 205 (511)
Q Consensus 126 pdiLdE~kwg~D~llkm~~~~g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~as~vfk~~ 205 (511)
+..++.+.=.+|+|+.-.++.+++....+. .+.|+. .. ...|+ +.++..+|+-|++++.
T Consensus 107 ~~~~~~~~~aA~~L~~r~~~~~g~i~sw~~-------~~~~~~---~~-~~iID--------~mmni~~L~~A~~~~g-- 165 (377)
T 2ahf_A 107 ESARKLALDAADVLMRRWRADAGIIQAWGP-------KGDPEN---GG-RIIID--------CLLNLPLLLWAGEQTG-- 165 (377)
T ss_dssp HHHHHHHHHHHHHHHTTEETTTTEECCBSS-------TTCTTT---TT-EEEGG--------GGGGHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCeEEeccC-------CCCCCC---Cc-eEEec--------hHHHHHHHHHHHHHhC--
Confidence 577788888888888765444333222221 011221 11 23454 2566889999999986
Q ss_pred CHHHHHHHHHHHHHHHHHHHhc--C--CC-cc-----CCCCcc---CCCCcchhH---------HHHHHHHHHHHcCChh
Q 042201 206 DSIYSSRLLNHSKSLFEFADKH--R--GS-YQ-----ASCPFY---CSYSGYQDE---------LLWAAAWLYKASEDNK 263 (511)
Q Consensus 206 D~~yA~~~l~~A~~a~~~a~~~--~--~~-y~-----~~~~~Y---~s~~~~~De---------~~wAAaeLy~aTg~~~ 263 (511)
||. +++.|++..++..++ + +. ++ ...+.- ....++.|+ .+++.++||+.|++.+
T Consensus 166 d~~----y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~T~d~~ 241 (377)
T 2ahf_A 166 DPE----YRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNAD 241 (377)
T ss_dssp CTH----HHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTCHH
T ss_pred CHH----HHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHHHHHCChH
Confidence 574 556666666666655 1 11 21 111111 011455565 5789999999999999
Q ss_pred HHHHHHHc
Q 042201 264 YLDYVLSN 271 (511)
Q Consensus 264 Yl~~a~~~ 271 (511)
||+.+++.
T Consensus 242 yL~~A~~l 249 (377)
T 2ahf_A 242 LLETAKRM 249 (377)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998764
No 18
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=90.44 E-value=0.84 Score=46.65 Aligned_cols=118 Identities=14% Similarity=0.083 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHHH-hccC-CCCeEEEEcCCCCCCCCCCCCCCCCCCCceEEEeCCCCcchHHHHHHHHHHHHhcccc--c
Q 042201 128 LRGAIRWGTDFIL-RAHT-SPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALAAASIVF--K 203 (511)
Q Consensus 128 iLdE~kwg~D~ll-km~~-~~g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~as~vf--k 203 (511)
+..|+.=-+.+++ ++.+ ..|+|+..+.. |.. |-. .++ .....+.++.++|.|++++ .
T Consensus 15 l~~~~~~~l~~w~~~~~D~~~GGf~~~~~~---dg~----~~~--~~k----------~l~~nar~l~~~a~a~~~~~~~ 75 (402)
T 1fp3_A 15 VGQELDRVMAFWLEHSHDREHGGFFTCLGR---DGR----VYD--DLK----------YVWLQGRQVWMYCRLYRKLERF 75 (402)
T ss_dssp HHHHHHHHHHHHHHHSBCTTTSSBCCCBCT---TSC----BSC--CCE----------EHHHHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHHhhccCCCCCCCCEeeEECC---CCC----CCC--Ccc----------chhhhHHHHHHHHHHHHHhccc
Confidence 4455556677887 5664 46788777753 221 211 111 2344588899999999987 2
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHhcCCCccC-CC-CccCCC---------Cc-chh--HHHHHHHHHHHHcCChhHHHHHH
Q 042201 204 KVDSIYSSRLLNHSKSLFEFADKHRGSYQA-SC-PFYCSY---------SG-YQD--ELLWAAAWLYKASEDNKYLDYVL 269 (511)
Q Consensus 204 ~~D~~yA~~~l~~A~~a~~~a~~~~~~y~~-~~-~~Y~s~---------~~-~~D--e~~wAAaeLy~aTg~~~Yl~~a~ 269 (511)
+ +| ++++.|++..+|..++- +.. .+ ++|.+. .. ..| -+++|.++||++||+..|++.+.
T Consensus 76 ~-~~----~~l~~A~~~~~fl~~~~--~d~~gg~g~~~s~d~dg~~~~~~~~lyd~af~~~a~~~~~~atgd~~~~~~A~ 148 (402)
T 1fp3_A 76 H-RP----ELLDAAKAGGEFLLRHA--RVAPPEKKCAFVLTRDGRPVKVQRSIFSECFYTMAMNELWRVTAEARYQSEAV 148 (402)
T ss_dssp C-CH----HHHHHHHHHHHHHHHHT--BSSTTSCCBCSEECTTSCEEECCSSSHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred C-CH----HHHHHHHHHHHHHHHhc--cCcCCCCceEEEECCCCCccccccchHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 2 35 78999999999999862 221 11 333221 00 112 36899999999999999998876
Q ss_pred Hc
Q 042201 270 SN 271 (511)
Q Consensus 270 ~~ 271 (511)
+.
T Consensus 149 ~l 150 (402)
T 1fp3_A 149 DM 150 (402)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 19
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=88.52 E-value=3.5 Score=43.10 Aligned_cols=113 Identities=16% Similarity=0.093 Sum_probs=75.3
Q ss_pred ccchhHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCCCCCCCCCCCCCCCCceEEEeCCCCcchHHHHHHHHHHHHhccc
Q 042201 122 VNQLGYLRGAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALAAASIV 201 (511)
Q Consensus 122 ~n~~pdiLdE~kwg~D~llkm~~~~g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~as~v 201 (511)
..+.+++++.++=-++.|++.|+++| ++++|=+. |+. | +-|++++.+|.+|+.+.+.
T Consensus 286 ~~~r~~l~~~~~~~a~~l~~~Q~~~G-~W~~vld~---------~~~-------y------~EsSaTAmfaygllkgvr~ 342 (445)
T 3k11_A 286 YPQRPKVMDYFRAHVRGVTALQSGEG-FWHQLLDC---------NDS-------Y------LETSATAIYVYCLAHAINK 342 (445)
T ss_dssp CTTHHHHHHHHHHHHHHHHTTCCTTS-CEESBTTC---------TTS-------C------EEHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCC-chhhccCC---------CCC-------C------CCccHHHHHHHHHHHHHHc
Confidence 34678899999999999999998766 66666431 211 2 1367889999999998874
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHhcC---CCccC---CCC------ccCCCCcc------hhHHHHHHHHHHHHcCC
Q 042201 202 FKKVDSIYSSRLLNHSKSLFEFADKHR---GSYQA---SCP------FYCSYSGY------QDELLWAAAWLYKASED 261 (511)
Q Consensus 202 fk~~D~~yA~~~l~~A~~a~~~a~~~~---~~y~~---~~~------~Y~s~~~~------~De~~wAAaeLy~aTg~ 261 (511)
.-.|+ ++++..|+++|+.+..+- |.... +++ +|.+..-. .-.++||++|+++..+.
T Consensus 343 -G~Ld~---~~Y~~~A~ka~~~L~~~i~~dG~l~~v~~gtg~g~d~~~Y~~~p~~~~d~~G~G~fllA~~E~~~l~~~ 416 (445)
T 3k11_A 343 -GWIDA---IAYGPVAQLGWHAVAGKINEEGQVEGTCVGTGMAFDPAFYYYRPVNVYAAHGYGPVLWAGAEMIRLLNT 416 (445)
T ss_dssp -TSSCH---HHHHHHHHHHHHHHHTTBCTTSCBCSCBCCCCCCSSHHHHHTCCBCTTCGGGHHHHHHHHHHHHHHHHH
T ss_pred -CCCCH---HHHHHHHHHHHHHHHHhCCCCCCEeceeeccCCCCCchhhccCcccCCCCccHHHHHHHHHHHHHHhcc
Confidence 22343 479999999999998752 22211 111 22221111 12489999999998543
No 20
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=88.22 E-value=4.2 Score=41.23 Aligned_cols=57 Identities=16% Similarity=0.230 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHhcCCCccCCCCccCC----CCcchhHHHHHH---HHHHHHcCChhHHHHHHH
Q 042201 212 RLLNHSKSLFEFADKHRGSYQASCPFYCS----YSGYQDELLWAA---AWLYKASEDNKYLDYVLS 270 (511)
Q Consensus 212 ~~l~~A~~a~~~a~~~~~~y~~~~~~Y~s----~~~~~De~~wAA---aeLy~aTg~~~Yl~~a~~ 270 (511)
++++.|+++.+++..+|.. . .++++.. +..+.|.++++. ++|++.||+++|++.+.+
T Consensus 107 ~yl~~a~~la~~l~~~~r~-~-~G~fw~~~~~~~~~w~D~l~m~~p~L~~l~~~tgd~~y~d~A~~ 170 (373)
T 1nc5_A 107 RYVKAAKRLRSLYGTLNRT-S-EGGFWHKDGYPYQMWLDGLYMGGPFALKYANLKQETELFDQVVL 170 (373)
T ss_dssp HHHHHHHHHHGGGGTSCBC-T-TSCBCSCTTSTTEEETHHHHHHHHHHHHHHHHHTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCC-C-CCCeeccCCCCCeEEeCcHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 6888899999888766511 1 1222211 133678876554 688899999999998865
No 21
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=87.81 E-value=1.4 Score=44.59 Aligned_cols=66 Identities=21% Similarity=0.240 Sum_probs=46.9
Q ss_pred HHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHhcCCCccCCCCccCCCCcchhHHH---HHHHHHHHHcCChhHHHH
Q 042201 191 SAAALAAASIVFKKVDSIYSSRLLNHSKSLFEFADKHRGSYQASCPFYCSYSGYQDELL---WAAAWLYKASEDNKYLDY 267 (511)
Q Consensus 191 ~AAalA~as~vfk~~D~~yA~~~l~~A~~a~~~a~~~~~~y~~~~~~Y~s~~~~~De~~---wAAaeLy~aTg~~~Yl~~ 267 (511)
+..+|.-++++.. |+ ++++.|+++..+....... .. . .++.||.. +|.+.+|++|++++||+.
T Consensus 51 ~~~~l~d~~~~tg--d~----~y~~~a~~~~~~~~~~~~~------~~-~-~~~~DD~a~~~la~~~aye~t~~~~yL~~ 116 (349)
T 3k7x_A 51 LVEVRLDAYLRTK--KQ----ADLEVAEKTYLHNKNRNGG------TL-I-HDFYDDMLWNALAAYRLYKATGKSIYLED 116 (349)
T ss_dssp HHHHHHHHHHHHC--CH----HHHHHHHHHHHHHHHHTTS------SS-C-CSBHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHHHhC--CH----HHHHHHHHHHHHHHhcCCC------CC-C-ccCccHHHHHHHHHHHHHHHHCCchHHHH
Confidence 3588888888775 56 5677788888777653211 11 1 34667754 589999999999999998
Q ss_pred HHH
Q 042201 268 VLS 270 (511)
Q Consensus 268 a~~ 270 (511)
++.
T Consensus 117 A~~ 119 (349)
T 3k7x_A 117 AQL 119 (349)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 22
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=85.76 E-value=1.5 Score=44.67 Aligned_cols=82 Identities=20% Similarity=0.088 Sum_probs=51.3
Q ss_pred CcchHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHH-Hhc---C---CCccC----CCC--ccCCCCc---ch
Q 042201 182 SPGSEAAAESAAALAAASIVFKKVDSIYSSRLLNHSKSLFEFA-DKH---R---GSYQA----SCP--FYCSYSG---YQ 245 (511)
Q Consensus 182 ~p~s~~a~~~AAalA~as~vfk~~D~~yA~~~l~~A~~a~~~a-~~~---~---~~y~~----~~~--~Y~s~~~---~~ 245 (511)
+||-+ .+.+-.|+.+++++. |+ ++++.|+++++|+ .++ + +.+.. ..+ +..+... -.
T Consensus 245 ~pgh~--ie~~wlL~~a~~~~~--~~----~~l~~A~~~~~~~~~~~~~d~~~gg~~~~~~~~g~~~~~l~d~~~~~W~q 316 (402)
T 1fp3_A 245 NPGHA--LEAGWFLLRHSSRSG--DA----KLRAHVIDTFLLLPFRSGWDADHGGLFYFQDADGLCPTQLEWAMKLWWPH 316 (402)
T ss_dssp CHHHH--HHHHHHHHHHHHHTT--CH----HHHHHHHHHHTHHHHHHHBCTTTCSBCSCEETTSCCCSSTTTTCEEHHHH
T ss_pred CCCcH--HHHHHHHHHHHHHcC--Ch----HHHHHHHHHHHHHHHHHhccCCCCCEEEeecCCCCccccCcCCCcCcHHH
Confidence 35544 344446888888874 56 6788888888888 554 1 22211 111 0000000 01
Q ss_pred hHHHHHHHHHHHHcCChhHHHHHHHc
Q 042201 246 DELLWAAAWLYKASEDNKYLDYVLSN 271 (511)
Q Consensus 246 De~~wAAaeLy~aTg~~~Yl~~a~~~ 271 (511)
-|.+.|++.||++||+.+|++.+++.
T Consensus 317 aea~~a~l~ly~~tgd~~yl~~a~~~ 342 (402)
T 1fp3_A 317 SEAMIAFLMGYSESGDPALLRLFYQV 342 (402)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 27799999999999999999987764
No 23
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=85.10 E-value=28 Score=35.26 Aligned_cols=110 Identities=12% Similarity=0.097 Sum_probs=63.7
Q ss_pred hHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCC-CCCCCCCCCCCCCCceEEEeCCCCcchHHHHHHHHHHHHhcccccc
Q 042201 126 GYLRGAIRWGTDFILRAHTSPTTLYTQVGDGNA-DHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALAAASIVFKK 204 (511)
Q Consensus 126 pdiLdE~kwg~D~llkm~~~~g~~y~~Vg~~~~-dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~as~vfk~ 204 (511)
++|.+.++-.++-|+.+...+|.|-.+.-++.. |.. ..+++-++ .+.+..+|..++++.+
T Consensus 25 ~~~~~~l~~~~~~l~~~~~~~~~f~~~~~~~~~~d~k--------~~~~W~Wt----------~G~~~~gl~~~ye~Tg- 85 (382)
T 3pmm_A 25 SELQALIRNVTQNLVNIKDESGQFLLRLDDGRVIDTK--------GWAGWEWT----------HGVGLYGIYQYYQQTG- 85 (382)
T ss_dssp HHHHHHHHHHHHHHHHCCCTTCTTCEECTTSCEECSS--------STTSCSHH----------HHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHhccCccccccccCCccccccCC--------CCcCcccc----------HHHHHHHHHHHHHHHC-
Confidence 456666666777788887666766555543211 111 11222222 2667888888888876
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCCccCCCCccCCCCcchh--HHHHHHHHHHHHcCChhHHHHHHH
Q 042201 205 VDSIYSSRLLNHSKSLFEFADKHRGSYQASCPFYCSYSGYQD--ELLWAAAWLYKASEDNKYLDYVLS 270 (511)
Q Consensus 205 ~D~~yA~~~l~~A~~a~~~a~~~~~~y~~~~~~Y~s~~~~~D--e~~wAAaeLy~aTg~~~Yl~~a~~ 270 (511)
|+ ++++.|++.++......+... ..| -.+.+.++||+.||+++|++.+..
T Consensus 86 -d~----~y~~~a~~~~~~~~~~~~~~~-----------n~D~~~~~~~l~~lY~~Tgd~~Yl~~a~~ 137 (382)
T 3pmm_A 86 -DI----EMRDIIDRWFADRFAEGATTK-----------NVNTMAPFLTLAYRFEETGRMAYLPWLES 137 (382)
T ss_dssp -CH----HHHHHHHHHHHHHHHHCCCCC-----------CTTTTTTHHHHHHHHHHHCCGGGHHHHHH
T ss_pred -CH----HHHHHHHHHHHHHHcCCCCcC-----------cccchHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 46 555566655543332211110 011 123467999999999999998754
No 24
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=80.28 E-value=2.9 Score=43.05 Aligned_cols=113 Identities=10% Similarity=-0.058 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHHHhccCCCCeEEEEcCCCCCCCCCCCCCCCCCCCceEEEeCCCCcchHHHHHHHHHHHHhccccccCCH
Q 042201 128 LRGAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALAAASIVFKKVDS 207 (511)
Q Consensus 128 iLdE~kwg~D~llkm~~~~g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~as~vfk~~D~ 207 (511)
+.+++.--++|.+++.+.. +| +.+.. + |.+ .. ..++ ..-..+.++.++|.|++ ++ ++
T Consensus 13 l~~~~~~ll~f~~~~~d~~-GF-~~ld~---~---g~~-~~-~~~k----------~~~~nar~i~~~a~a~~-~g--~~ 69 (421)
T 2zbl_A 13 LEQETDRIFNFGKNAVVPT-GF-GWLGN---K---GQI-KE-EMGT----------HLWITARMLHVYSVAAS-MG--RP 69 (421)
T ss_dssp HHHHHHHHHHHHGGGEETT-EE-CCBCT---T---SCB-CG-GGCE----------EHHHHHHHHHHHHHHHH-TT--CT
T ss_pred HHHHHHHHHHHHHhCcCCC-Cc-ceECC---C---CCC-CC-Cchh----------hHHHHHHHHHHHHHHHH-cC--Ch
Confidence 5566666777778876544 44 33322 2 211 11 0111 23456999999999987 64 34
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCccC-CCCccCCC--------Ccch---hHHHHHHHHHHHHcCChhHHHHHHH
Q 042201 208 IYSSRLLNHSKSLFEFADKHRGSYQA-SCPFYCSY--------SGYQ---DELLWAAAWLYKASEDNKYLDYVLS 270 (511)
Q Consensus 208 ~yA~~~l~~A~~a~~~a~~~~~~y~~-~~~~Y~s~--------~~~~---De~~wAAaeLy~aTg~~~Yl~~a~~ 270 (511)
++++.|++..+|..++ .+.. .+++|.+. .... -.+++|.++ |++||++.|++.+++
T Consensus 70 ----~~l~~A~~~~~fl~~~--~~D~~~GG~~~s~d~dg~~~~~k~lyd~Af~i~al~~-~~~tg~~~~l~~a~~ 137 (421)
T 2zbl_A 70 ----GAYDLVDHGIKAMNGA--LRDKKYGGWYACVNDQGVVDASKQGYQHFFALLGAAS-AVTTGHPEARKLLDY 137 (421)
T ss_dssp ----THHHHHHHHHHHHTTT--TBCTTTSSBCSEEETTEEEECCEEHHHHHHHHHHHHH-HHTTTCTTHHHHHHH
T ss_pred ----hHHHHHHHHHHHHHHh--ccCcCCCeEEEEeCCCCCcCCchhHHHHHHHHHHHHH-HHHhCCccHHHHHHH
Confidence 5788999999999876 3332 24444331 0111 146789999 999999999998765
No 25
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=80.01 E-value=33 Score=35.63 Aligned_cols=192 Identities=10% Similarity=0.108 Sum_probs=95.4
Q ss_pred cCCCchHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccCCCCCCCCCCCccccccceecCCCCcccccchHHHHHHHHHHH
Q 042201 33 FCSTTTFAYRDALGKAILFFEGQRSGKLPESQRVKWRGNSALSDGKPENVNLIGGYYDAGDNVKFGWPMAYSVSLLSWAA 112 (511)
Q Consensus 33 ~~~~~~~~Y~~~l~~sl~fy~~QR~G~lp~~~~~~w~~~s~~~Dg~~~~~DlsGGWyDAGD~~Ky~~~~a~s~~~L~~~~ 112 (511)
+-.......++++...+.++..+-.-.+..... +. .+.|.. +.+ ..=..+-|++.+...+.+..+.-|+-++
T Consensus 24 ~~~~~~~~i~~~~d~~~~~~~~~~~~~~~~~~~----~~-~~~~~~--~~~-~~~~~~~~~~~~~~y~~Gv~l~gl~~ay 95 (445)
T 3k11_A 24 YGDLTPEQVKKDIDRVFAYIDKETPARVVDKNT----GK-VITDYT--AMG-DEAQLERGAFRLASYEWGVTYSALIAAA 95 (445)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHHTSCCCEEETTT----CC-EECCTT--TCC-TTEEECCCSSCTTSHHHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHHHHhccCcceeecCCC----Cc-eecccc--ccc-cccccccCCcccCccCHHHHHHHHHHHH
Confidence 455788888999999998887643332221100 00 011110 111 0012334677776667777777776555
Q ss_pred HHcHHHHhcccchhHHHHHHHHHHHHHHh-------ccCCCCeEEEEcCCCCCCCCCCCCCCCCCCCceEEEeCCCCcch
Q 042201 113 VEYQREISSVNQLGYLRGAIRWGTDFILR-------AHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGS 185 (511)
Q Consensus 113 ~e~~~~~~s~n~~pdiLdE~kwg~D~llk-------m~~~~g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s 185 (511)
... +-++.++-++=-+|++++ ....+|.+.+.+-+. . .|. .-
T Consensus 96 ~~T--------gd~kY~~ya~~~~dfi~~~~p~~~~~~~~~G~l~~~~r~~------~-~~~----------------~L 144 (445)
T 3k11_A 96 ETT--------GDKRYTDYVQNRFRFLAEVAPHFKRVYEEKGKTDSQLLQI------L-TPH----------------AL 144 (445)
T ss_dssp HHH--------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHH------H-SCC----------------SG
T ss_pred HHH--------CCHHHHHHHHHHHHHHHhccchhhhhhhccCCeecccccc------c-CCC----------------cc
Confidence 433 223444444444444433 111233332211110 0 000 01
Q ss_pred HHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHhcCCCccCCCC-----ccCCCCcchhHHHHH---HHHHHH
Q 042201 186 EAAAESAAALAAASIVFKKVDSIYSSRLLNHSKSLFEFADKHRGSYQASCP-----FYCSYSGYQDELLWA---AAWLYK 257 (511)
Q Consensus 186 ~~a~~~AAalA~as~vfk~~D~~yA~~~l~~A~~a~~~a~~~~~~y~~~~~-----~Y~s~~~~~De~~wA---AaeLy~ 257 (511)
|-.+.++.+|-.+.++ ..|+ ++++.|+++.+++...-....+ ++ .|+. .-|.|.++.+ -+++.+
T Consensus 145 DD~g~~~~~Li~lY~~--T~d~----~yl~~a~~~ad~L~~~~pRt~~-Ggf~h~~~~~~-q~WiD~lyM~~pfla~~~~ 216 (445)
T 3k11_A 145 DDAGAVCTAMIKLRLK--DESL----PVDGLIQNYFDFIINKEYRLAD-GTFARNRPQRN-TLWLDDMFMGIPAVAQMSR 216 (445)
T ss_dssp GGTHHHHHHHHHHHHH--CTTC----CCHHHHHHHHHHHHHTSCBCTT-CCBCBCSSSTT-EEETHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHh--cCCH----HHHHHHHHHHHHHHHcCCCCCC-CceeecCCCCC-ceEecchhhHHHHHHHHHH
Confidence 1124444444444442 2344 6788888888888775211111 11 2223 4467876544 456677
Q ss_pred HcCChh--HHHHHHHc
Q 042201 258 ASEDNK--YLDYVLSN 271 (511)
Q Consensus 258 aTg~~~--Yl~~a~~~ 271 (511)
.||+++ |++.+...
T Consensus 217 ~tgd~~~~y~d~A~~q 232 (445)
T 3k11_A 217 YDKEAKNKYLAEAVKQ 232 (445)
T ss_dssp HCGGGHHHHHHHHHHH
T ss_pred HHCCcchHHHHHHHHH
Confidence 899999 99987653
No 26
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=76.52 E-value=11 Score=38.80 Aligned_cols=118 Identities=15% Similarity=0.034 Sum_probs=70.7
Q ss_pred chhHHHHHHHHHHHHHHhcc-CC-CCeEEEEcCCCCCCCCCCCCCCCCCCCceEEEeCCCCcchHHHHHHHHHHHHhccc
Q 042201 124 QLGYLRGAIRWGTDFILRAH-TS-PTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALAAASIV 201 (511)
Q Consensus 124 ~~pdiLdE~kwg~D~llkm~-~~-~g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~as~v 201 (511)
+.|+.++-++-+++||++-. +. .|++|..+.. + |..|. +..+ ..-+.++.+++. +++
T Consensus 67 g~~~~l~~A~~~~~fl~~~~~D~~~GG~~~s~d~---d---g~~~~----~k~l----------yd~Af~i~al~~-~~~ 125 (421)
T 2zbl_A 67 GRPGAYDLVDHGIKAMNGALRDKKYGGWYACVND---Q---GVVDA----SKQG----------YQHFFALLGAAS-AVT 125 (421)
T ss_dssp TCTTHHHHHHHHHHHHTTTTBCTTTSSBCSEEET---T---EEEEC----CEEH----------HHHHHHHHHHHH-HHT
T ss_pred CChhHHHHHHHHHHHHHHhccCcCCCeEEEEeCC---C---CCcCC----chhH----------HHHHHHHHHHHH-HHH
Confidence 45889999999999999853 43 3777766521 1 22222 1111 222455556665 555
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHhcCCCccC-CCCccCC----------CCcchhH--HHHHHHHHHHHcCChhHHHHH
Q 042201 202 FKKVDSIYSSRLLNHSKSLFEFADKHRGSYQA-SCPFYCS----------YSGYQDE--LLWAAAWLYKASEDNKYLDYV 268 (511)
Q Consensus 202 fk~~D~~yA~~~l~~A~~a~~~a~~~~~~y~~-~~~~Y~s----------~~~~~De--~~wAAaeLy~aTg~~~Yl~~a 268 (511)
.. ++ +.++.|++++++.+++-. .. .+++|.+ ....... ++-|.+.|+++||+..|++.+
T Consensus 126 tg--~~----~~l~~a~~~~~~l~~~~~--d~~~Ggf~~~~d~d~~~~~~~~~~n~~m~~~~al~~l~~~tgd~~~~~~A 197 (421)
T 2zbl_A 126 TG--HP----EARKLLDYTIEVIEKYFW--SEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRA 197 (421)
T ss_dssp TT--CT----THHHHHHHHHHHHHHHTE--ETTTTEECCEECTTSCSBCSCEEHHHHHHHHHHHHHHHHTTCCTHHHHHH
T ss_pred hC--Cc----cHHHHHHHHHHHHHHHhc--cCCCCCeeeeecCCCCcccccCCCcHHHHHHHHHHHHHHhhCCHHHHHHH
Confidence 43 34 567888888898887510 00 1122211 0112333 378889999999999999876
Q ss_pred HH
Q 042201 269 LS 270 (511)
Q Consensus 269 ~~ 270 (511)
++
T Consensus 198 ~~ 199 (421)
T 2zbl_A 198 LR 199 (421)
T ss_dssp HH
T ss_pred HH
Confidence 55
No 27
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=69.87 E-value=14 Score=37.91 Aligned_cols=115 Identities=16% Similarity=0.166 Sum_probs=69.5
Q ss_pred cchhHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCCCCCCCCCCCCCCCCceEEEeCCCCcchHHHHHHHHHHHHhcccc
Q 042201 123 NQLGYLRGAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALAAASIVF 202 (511)
Q Consensus 123 n~~pdiLdE~kwg~D~llkm~~~~g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~as~vf 202 (511)
-+.+.+++.|+=.++|+++.+..+|. |-.......++.+..+ -|+ ..++-++..+++++
T Consensus 247 ~~~~~~~~~i~~~l~~l~~~~~~~g~--------------wp~~~~~~~~~~~~wC----hG~---~Gi~~~l~~~~~~~ 305 (411)
T 3e6u_A 247 VSQGKLHSLVKPSVDYVCQLKFPSGN--------------YPPCIGDNRDLLVHWC----HGA---PGVIYMLIQAYKVF 305 (411)
T ss_dssp CCHHHHHHTHHHHHHHHHHTCCTTSC--------------CCSBTTCCCCCCCSSS----SSH---HHHHHHHHHHHHHH
T ss_pred cChHHHHHHHHHHHHHHHHhhccCCC--------------CCCCCCcccCcccccc----CCc---HHHHHHHHHHHHHc
Confidence 34678889999999999998753331 3110011112222221 233 34566677777777
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHH--hcCCCccCCCCccCCCCcchhHHHHHHHHHHHHcCChhHHHHHHHc
Q 042201 203 KKVDSIYSSRLLNHSKSLFEFAD--KHRGSYQASCPFYCSYSGYQDELLWAAAWLYKASEDNKYLDYVLSN 271 (511)
Q Consensus 203 k~~D~~yA~~~l~~A~~a~~~a~--~~~~~y~~~~~~Y~s~~~~~De~~wAAaeLy~aTg~~~Yl~~a~~~ 271 (511)
. |+++-+.+.+.++..|+... +.++..+ + .--.+.+-..||+.|+++.|++.+...
T Consensus 306 ~--~~~~~~~a~~~~~~~~~~g~~~~~~~lCh---G--------~aG~~~~ll~~~~~t~~~~~~~~A~~~ 363 (411)
T 3e6u_A 306 R--EEKYLCDAYQCADVIWQYGLLKKGYGLCH---G--------SAGNAYAFLTLYNLTQDMKYLYRACKF 363 (411)
T ss_dssp C--CHHHHHHHHHHHHHHHHHCSBTTCSCSTT---S--------HHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred C--CHHHHHHHHHHHHHHHhcCccCCCCceec---C--------hHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 5 68777777777777776421 1122222 1 123477889999999999999987654
No 28
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=66.03 E-value=61 Score=32.83 Aligned_cols=140 Identities=16% Similarity=0.122 Sum_probs=80.2
Q ss_pred HHHHHHHHHHcHHHHhcccchhHHHHHHHHHHHHHHhcc-CCCCeEEEEcC----CCCCCCCCCCCCCCCCCCceEEEeC
Q 042201 105 VSLLSWAAVEYQREISSVNQLGYLRGAIRWGTDFILRAH-TSPTTLYTQVG----DGNADHQCWERPEDMDTPRTLYRIT 179 (511)
Q Consensus 105 ~~~L~~~~~e~~~~~~s~n~~pdiLdE~kwg~D~llkm~-~~~g~~y~~Vg----~~~~dh~~w~~Pe~~~~~R~~~~~~ 179 (511)
+..|+|+...+ +-|+.+++++=-++++++-+ +++|.+||.+- ++..-|. |..+.-.++..+
T Consensus 154 i~~L~~A~~~~--------gd~~y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~-~t~qG~~dds~W----- 219 (377)
T 2ahf_A 154 LPLLLWAGEQT--------GDPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRG-GTHQGNTDGSTW----- 219 (377)
T ss_dssp HHHHHHHHHHH--------CCTHHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEE-ECSSSSSTTSCB-----
T ss_pred HHHHHHHHHHh--------CCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeeeC-CCcCCcCCcchh-----
Confidence 66777776542 56889999999999999976 45788888765 2221000 111111011111
Q ss_pred CCCcchHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHhc-CC--C-ccC-CCCccCCCCcchhH-----HH
Q 042201 180 SDSPGSEAAAESAAALAAASIVFKKVDSIYSSRLLNHSKSLFEFADKH-RG--S-YQA-SCPFYCSYSGYQDE-----LL 249 (511)
Q Consensus 180 ~~~p~s~~a~~~AAalA~as~vfk~~D~~yA~~~l~~A~~a~~~a~~~-~~--~-y~~-~~~~Y~s~~~~~De-----~~ 249 (511)
+-.-+-++-+++...++.+ |+ ++|+.|+++-++..++ |. . |-+ ..+.- . ....|. .+
T Consensus 220 -----aRGqAw~i~gl~~ly~~T~--d~----~yL~~A~~la~~~l~~~~~d~~pywd~~~~~~-~-~~~~d~Sa~aiaA 286 (377)
T 2ahf_A 220 -----TRGQAWGIYGFALNSRYLG--NA----DLLETAKRMARHFLARVPEDGVVYWDFEVPQE-P-SSYRDSSASAITA 286 (377)
T ss_dssp -----HHHHHHHHHHHHHHHHHHT--CH----HHHHHHHHHHHHHHTTCCTTSSCBSBTTSCCC-T-TSCBCHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHHHHC--Ch----HHHHHHHHHHHHHHHhhHHhCCcccccCCCcc-C-CCccCCCHHHHHH
Confidence 1112444555665666543 45 7899999999999887 32 1 211 00000 0 112232 56
Q ss_pred HHHHHHHHHcC-----ChhHHHHHHHc
Q 042201 250 WAAAWLYKASE-----DNKYLDYVLSN 271 (511)
Q Consensus 250 wAAaeLy~aTg-----~~~Yl~~a~~~ 271 (511)
.+-++|.+.|+ +..|++.+++.
T Consensus 287 ~~Ll~L~~~~~~~~~~~~~Y~~~A~~~ 313 (377)
T 2ahf_A 287 CGLLEIASQLDESDPERQRFIDAAKTT 313 (377)
T ss_dssp HHHHHHHHTSCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCccccchHHHHHHHHHH
Confidence 77788888896 56788876653
No 29
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=64.88 E-value=19 Score=36.63 Aligned_cols=77 Identities=14% Similarity=0.075 Sum_probs=57.4
Q ss_pred cchhHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCCCCCCCCCCCCCCCCceEEEeCCCCcchHHHHHHHHHHHHhcccc
Q 042201 123 NQLGYLRGAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALAAASIVF 202 (511)
Q Consensus 123 n~~pdiLdE~kwg~D~llkm~~~~g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~as~vf 202 (511)
.+.+.+++.++=-+++|++.|+++| ++++|=+ .|+ .|. -|++++.+|.+|+-+.+.=
T Consensus 256 ~~~~~~~~~~~~~a~~~~~~q~~~G-~W~~~~d---------~~~-------~y~------EsSatA~~ay~ll~~~~~g 312 (382)
T 3pmm_A 256 AVRRYLITVLDAQIAALAECQDDSG-LWHTLLD---------DPH-------SYL------EASATAGFAYGILKAVRKR 312 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCTTS-CEESBTT---------CTT-------SCE------EHHHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCCC-ChhhccC---------CCC-------CCc------cccHHHHHHHHHHHHHHcC
Confidence 4568899999999999999998776 5666533 122 121 3678899999999988821
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHhc
Q 042201 203 KKVDSIYSSRLLNHSKSLFEFADKH 227 (511)
Q Consensus 203 k~~D~~yA~~~l~~A~~a~~~a~~~ 227 (511)
-.++ +++..|+++|+-+.++
T Consensus 313 -~l~~----~Y~~~a~ka~~~l~~~ 332 (382)
T 3pmm_A 313 -YVGQ----HYAGVAEKAIRGIVQN 332 (382)
T ss_dssp -SSCG----GGHHHHHHHHHHHHHT
T ss_pred -CCcH----HHHHHHHHHHHHHHhh
Confidence 1233 6899999999999886
No 30
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=64.40 E-value=35 Score=34.88 Aligned_cols=141 Identities=11% Similarity=-0.022 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHcHHHHhcccchhHHHHHHHHHHHHHHhcc-CCCCeEEEEcC----CCCCCCCCCCCCCCCCCCceEEEe
Q 042201 104 SVSLLSWAAVEYQREISSVNQLGYLRGAIRWGTDFILRAH-TSPTTLYTQVG----DGNADHQCWERPEDMDTPRTLYRI 178 (511)
Q Consensus 104 s~~~L~~~~~e~~~~~~s~n~~pdiLdE~kwg~D~llkm~-~~~g~~y~~Vg----~~~~dh~~w~~Pe~~~~~R~~~~~ 178 (511)
.+..|+|+... -+-|+.+++++=-++++++-+ +++|.+||.+- ++..-|. +..+.-.++..+.
T Consensus 178 ni~~L~~A~~~--------~gd~~y~~~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~~-~t~qGy~dds~Wa--- 245 (397)
T 2zzr_A 178 NIQLLFFAYEQ--------TGDEKYRQVAVNHFYASANNVVRDDSSAFHTFYFDPETGEPLKG-VTRQGYSDESSWA--- 245 (397)
T ss_dssp HTHHHHHHHHH--------HCCHHHHHHHHHHHHHHHHHTBCTTSCBCSEEEECTTTCCEEEE-ECTTSSSTTSCBH---
T ss_pred HHHHHHHHHHH--------hCCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCcccC-CcccccCcchhhH---
Confidence 44566665543 256889999999999999976 45788888765 2211000 0011110111111
Q ss_pred CCCCcchHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHhc-CC--C-ccC-CCCccCCCCcchhH-----H
Q 042201 179 TSDSPGSEAAAESAAALAAASIVFKKVDSIYSSRLLNHSKSLFEFADKH-RG--S-YQA-SCPFYCSYSGYQDE-----L 248 (511)
Q Consensus 179 ~~~~p~s~~a~~~AAalA~as~vfk~~D~~yA~~~l~~A~~a~~~a~~~-~~--~-y~~-~~~~Y~s~~~~~De-----~ 248 (511)
-.-+-++-+++..++.- .|+ ++|+.|+++.++..++ |. . |-+ ..+. .. ....|. .
T Consensus 246 -------RGqAw~i~gl~~lY~~T--~d~----~yL~~A~~la~~~l~~~~~d~~pywdt~~~~-~~-~~~~D~Sa~aia 310 (397)
T 2zzr_A 246 -------RGQAWGIYGIPLSYRKM--KDY----QQIILFKGMTNYFLNRLPEDKVSYWDLIFTD-GS-GQPRDTSATATA 310 (397)
T ss_dssp -------HHHHHHHHHHHHHHHHH--CCH----HHHHHHHHHHHHHHHTCCTTSCCBSBTTCCT-TS-CCCBCHHHHHHH
T ss_pred -------HHHHHHHHHHHHHHHHH--CCH----HHHHHHHHHHHHHHHhhHHhCCccccCCCCC-CC-CCcCCCCHHHHH
Confidence 11233444555555543 355 7999999999999987 32 1 211 0000 01 123332 4
Q ss_pred HHHHHHHHHHcCC---hh--HHHHHHHc
Q 042201 249 LWAAAWLYKASED---NK--YLDYVLSN 271 (511)
Q Consensus 249 ~wAAaeLy~aTg~---~~--Yl~~a~~~ 271 (511)
+.+-++|.+.|++ .+ |++.+++.
T Consensus 311 A~~Ll~L~~~~~~~~~~~~~Y~~~A~~~ 338 (397)
T 2zzr_A 311 VCGIHEMLKYLPEVDPDKETYKYAMHTM 338 (397)
T ss_dssp HHHHHHHHTTSCTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCccchhhHHHHHHHHHH
Confidence 5666777777886 67 88877653
No 31
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=58.85 E-value=36 Score=35.73 Aligned_cols=93 Identities=13% Similarity=0.030 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHHhccCCCC--eEEEE---------------cCCCC-CCCCCCC--CCCCCCCCceEEEeCCCCcchH
Q 042201 127 YLRGAIRWGTDFILRAHTSPT--TLYTQ---------------VGDGN-ADHQCWE--RPEDMDTPRTLYRITSDSPGSE 186 (511)
Q Consensus 127 diLdE~kwg~D~llkm~~~~g--~~y~~---------------Vg~~~-~dh~~w~--~Pe~~~~~R~~~~~~~~~p~s~ 186 (511)
..++-++--+++|..+|..++ +.|.- .|.+. ..+..|+ +|++|..... |-+ -
T Consensus 205 ~w~~av~~il~~l~~eq~~~~~~~~Y~F~r~t~~~~dtl~~~G~G~pv~~tGLi~S~fRPSDDa~~yg-~~i-------p 276 (489)
T 2p0v_A 205 EWLQAIANVLKTFKEQQRKDDAKGPYRFQRKTERALDTMTNDGWGNPVKPVGLIASAFRPSDDATTFQ-FLV-------P 276 (489)
T ss_dssp HHHHHHHHHHHHHHHTTCSSCSSCSCCCCCCBSCGGGSCHHHHTCSCCCCSSCCCCSBCTTSCBCSSS-EEH-------H
T ss_pred HHHHHHHHHHHHHHHHhcccCCCCCceEeecCCCcccccccCCCCCccCCCCceeCCCCCCCcchhcC-cch-------H
Confidence 555788889999999876654 33321 12211 1233443 4666553333 332 2
Q ss_pred HHHHHHHHHHHhccccccC--CHHHHHHHHHHHHHHHHHHHhc
Q 042201 187 AAAESAAALAAASIVFKKV--DSIYSSRLLNHSKSLFEFADKH 227 (511)
Q Consensus 187 ~a~~~AAalA~as~vfk~~--D~~yA~~~l~~A~~a~~~a~~~ 227 (511)
..+.+.++|-.++.+.+.. |+++|++|.+.|+++-+-.+++
T Consensus 277 SN~~a~v~L~~aaeia~~v~~d~~la~~~~~lA~eI~~gI~~~ 319 (489)
T 2p0v_A 277 SNFFAVTSLRKAAEILNTVNRKPALAKECTALADEVEKALKKY 319 (489)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHh
Confidence 3466778888888776543 6899999999999998888765
No 32
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=55.23 E-value=30 Score=34.81 Aligned_cols=79 Identities=13% Similarity=0.024 Sum_probs=54.3
Q ss_pred cchhHHHHHHHHHHHHHHhccCC-CCeEEEEcCCCCCCCCCCCCCCCCCCCceEEEeCCCCcchHHHHHHHHHHHHhccc
Q 042201 123 NQLGYLRGAIRWGTDFILRAHTS-PTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALAAASIV 201 (511)
Q Consensus 123 n~~pdiLdE~kwg~D~llkm~~~-~g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~as~v 201 (511)
.+.+.+++.++=-+++|++.|++ +| ++++|-+. |+.... | +-|++++.++.+|+.+.+.
T Consensus 234 ~~~~~~~~~~~~~a~~l~~~q~~~dG-~W~~~ld~---------~~~~~~----~------~EsSatA~~ay~l~~g~~~ 293 (373)
T 1nc5_A 234 PNRHVWKNTLQDMIKSICRYQDKETG-LWYQIVDK---------GDRSDN----W------LESSGSCLYMYAIAKGINK 293 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCTTTS-CCBSBTTC---------TTSTTC----C------BCHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCC-ceeeecCC---------CCCCCC----C------ccccHHHHHHHHHHHHHHC
Confidence 35678999999999999999975 66 45555321 211111 1 2367788999999887653
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHh
Q 042201 202 FKKVDSIYSSRLLNHSKSLFEFADK 226 (511)
Q Consensus 202 fk~~D~~yA~~~l~~A~~a~~~a~~ 226 (511)
.-.|+ +++..|+++|+.+.+
T Consensus 294 -g~l~~----~Y~~~a~k~~~~l~~ 313 (373)
T 1nc5_A 294 -GYLDR----AYETTLLKAYQGLIQ 313 (373)
T ss_dssp -TSSCG----GGHHHHHHHHHHHHH
T ss_pred -CCCcH----HHHHHHHHHHHHHHH
Confidence 11243 689999999998866
No 33
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=51.84 E-value=88 Score=31.12 Aligned_cols=84 Identities=19% Similarity=0.134 Sum_probs=53.4
Q ss_pred hhHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCCCCCCCCCCCCCCCCceEEEeCCCCcchHHHHHHHHHHHHhccc---
Q 042201 125 LGYLRGAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALAAASIV--- 201 (511)
Q Consensus 125 ~pdiLdE~kwg~D~llkm~~~~g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~as~v--- 201 (511)
-+...+-++=|++|||.||-.+|+. .| +| |+...-.. .|+- .-|+++.+.-+|+....-
T Consensus 92 ~~~y~~Ai~Rgl~wlL~mQ~~nGGW-pq-----Fd------pd~~~Yl~---~IpF---nDDvtarvLelL~~~~~~~~~ 153 (332)
T 1gxm_A 92 NTKYRDAVRKAANFLVNSQYSTGAL-PQ-----FY------PLKGGYSD---HATF---NDNGMAYALTVLDFAANKRAP 153 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHCCTTSCC-BS-----EE------SCCSGGGG---SEEC---GGGHHHHHHHHHHHHHTTCTT
T ss_pred chHHHHHHHHHHHHHHhccCCCCCc-cc-----cC------CCcccccc---cCCc---chHHHHHHHHHHHHHHhccCC
Confidence 4678899999999999999877642 10 00 22111011 1211 137889998888887541
Q ss_pred cc---cCCHHHHHHHHHHHHHHHHHHHhc
Q 042201 202 FK---KVDSIYSSRLLNHSKSLFEFADKH 227 (511)
Q Consensus 202 fk---~~D~~yA~~~l~~A~~a~~~a~~~ 227 (511)
|. -.|++. .+...+.+++-+|+.+.
T Consensus 154 ~~~~~~~~~~~-~~~~~av~Rgid~Llk~ 181 (332)
T 1gxm_A 154 FDTDVFSDNDR-TRFKTAVTKGTDYILKA 181 (332)
T ss_dssp SCSTTSCHHHH-HHHHHHHHHHHHHHHHH
T ss_pred ccccccccchh-hhhHHHHHHHHHHHHHh
Confidence 11 024555 77888889999999876
No 34
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=51.05 E-value=2.8e+02 Score=30.45 Aligned_cols=92 Identities=13% Similarity=0.094 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHhccCCCCeEEEEcCCCCCCCCCCCCCCCCCCCceEEEeCCCCcchHHHHHHHHHHHHhccccccCCHH
Q 042201 129 RGAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALAAASIVFKKVDSI 208 (511)
Q Consensus 129 LdE~kwg~D~llkm~~~~g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~as~vfk~~D~~ 208 (511)
.+.++=+++||++||.+||++-.--.+.......+.+|.+.-. +.. + +.+..+.|+.+..+|+.....+..+..
T Consensus 480 ~~~i~~av~wLls~Q~~DGgw~a~~~~~~~~~l~~i~~~e~fg-~~~--~--d~s~v~~Ta~vL~aL~~~~~~~~~~~~- 553 (732)
T 1w6k_A 480 RERLCDAVAVLLNMRNPDGGFATYETKRGGHLLELLNPSEVFG-DIM--I--DYTYVECTSAVMQALKYFHKRFPEHRA- 553 (732)
T ss_dssp HHHHHHHHHHHHTTCCTTSCBCSSSCCCSCGGGGGGCCCSSCS-SCS--S--CCCBHHHHHHHHHHHHHHHHHCTTSSH-
T ss_pred HHHHHHHHHHHHHhcCCCCCEEeecCCCchHHHhhCcchhccc-ccc--c--CCCcchHHHHHHHHHHHhccccccccc-
Confidence 3456678899999999998762100000000000122222111 111 1 123456677777777766544332221
Q ss_pred HHHHHHHHHHHHHHHHHhcC
Q 042201 209 YSSRLLNHSKSLFEFADKHR 228 (511)
Q Consensus 209 yA~~~l~~A~~a~~~a~~~~ 228 (511)
++.....+++-+|+.++.
T Consensus 554 --~~~~~~i~rAv~yL~~~Q 571 (732)
T 1w6k_A 554 --AEIRETLTQGLEFCRRQQ 571 (732)
T ss_dssp --HHHHHHHHHHHHHHHHHS
T ss_pred --hhhHHHHHHHHHHHHhhc
Confidence 123345567778888763
No 35
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=44.33 E-value=84 Score=32.19 Aligned_cols=86 Identities=17% Similarity=0.147 Sum_probs=58.0
Q ss_pred hhHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCCCCCCCCCCCCCCCCceEEEeCCCCcchHHHHHHHHHHHHhccc---
Q 042201 125 LGYLRGAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALAAASIV--- 201 (511)
Q Consensus 125 ~pdiLdE~kwg~D~llkm~~~~g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~as~v--- 201 (511)
-+...+-++=|++|||.||-.+|+. .+ + .|+... +.-.|+- .-++++.+.-.|+....-
T Consensus 170 ~~~y~~Ai~Rgl~wlL~mQ~~nGGW-pq-----F------dpdn~~---y~~~IpF---nDDvt~rvle~L~~~~~~~~~ 231 (408)
T 1r76_A 170 AAPYRDAALKGIEYLLASQFPNGGW-PQ-----V------WPLEGG---YHDAITY---NDDALVHVAELLSDIAAGRDG 231 (408)
T ss_dssp CHHHHHHHHHHHHHHHHHSCTTSCC-BS-----B------SSCCCG---GGGSEEC---GGGHHHHHHHHHHHHHHTCTT
T ss_pred cHHHHHHHHHHHHHHHHccCCCCCC-cC-----c------Cccccc---cccCCCc---CcHHHHHHHHHHHHHHhccCc
Confidence 4778999999999999999877642 11 1 122211 1111211 127888888888776652
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHhcC
Q 042201 202 FKKVDSIYSSRLLNHSKSLFEFADKHR 228 (511)
Q Consensus 202 fk~~D~~yA~~~l~~A~~a~~~a~~~~ 228 (511)
|.-.|+++..++..+.+++-+|+.+..
T Consensus 232 ~~~~~~~~~~~~~~av~Rgi~~Ll~~Q 258 (408)
T 1r76_A 232 FGFVPPAIRTRALEATNAAIHCIVETQ 258 (408)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred ccccchhhhhhHHHHHHHHHHHHHHhh
Confidence 333588889999999999999998863
No 36
>2kmg_A KLCA; ARDB, spectroscopy, anti-restriction, plasmid, gene regulation; NMR {Bordetella pertussis}
Probab=38.45 E-value=19 Score=31.51 Aligned_cols=87 Identities=17% Similarity=0.235 Sum_probs=50.6
Q ss_pred HHHHhccCC-CCeEEE--EcCCCCCCCCCCCCCCCCCCCceEEEeCCC----CcchHHHHHHHHHHHHhccccccCCHHH
Q 042201 137 DFILRAHTS-PTTLYT--QVGDGNADHQCWERPEDMDTPRTLYRITSD----SPGSEAAAESAAALAAASIVFKKVDSIY 209 (511)
Q Consensus 137 D~llkm~~~-~g~~y~--~Vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~----~p~s~~a~~~AAalA~as~vfk~~D~~y 209 (511)
.|+.|+-++ +|+++. ++.++ ..+..|+. ..|....+..+ .-+.+++|-++..+|...+.++..+..-
T Consensus 40 ~~~~rl~~dY~GG~W~f~~lsnG----g~ym~P~~--~~~~~l~~~~N~f~~evSAdAaGIi~tL~~ls~~a~~~~~~~~ 113 (142)
T 2kmg_A 40 AWMRRLCERYNGAYWHYYALSDG----GFYMAPDL--AGRLEIEVNGNGFRGELSADAAGIVATLFALGQLAAEIADTDA 113 (142)
T ss_dssp HHHHHHCTTCCCCCCEEEEETTS----CEEEECCC--CSCEEEEETTTTEEEEECHHHHHHHHHHHHHHHHHHHTCSCTT
T ss_pred HHHHHhCccCCCCeeEEEEecCC----eeEecCCC--CCcEEEEecCCCCCceECHHHHHHHHHHHHHHHHHHhcccccc
Confidence 567777654 676644 55543 23445654 22433322211 2346888888888888887776543111
Q ss_pred HHHHHHHHHHHHHHHHhcCC
Q 042201 210 SSRLLNHSKSLFEFADKHRG 229 (511)
Q Consensus 210 A~~~l~~A~~a~~~a~~~~~ 229 (511)
.+.+.++--++.+||.+||.
T Consensus 114 ~d~l~~~y~~Lrdya~~HpE 133 (142)
T 2kmg_A 114 ADALIDRYHFLRGFAAGHPE 133 (142)
T ss_dssp TTTTHHHHHHHHHHGGGSTT
T ss_pred cHHHHHHHHHHHHHHHhCcc
Confidence 22334444789999999984
No 37
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=32.02 E-value=27 Score=36.37 Aligned_cols=24 Identities=29% Similarity=0.250 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHcCChhHHHHHHHc
Q 042201 248 LLWAAAWLYKASEDNKYLDYVLSN 271 (511)
Q Consensus 248 ~~wAAaeLy~aTg~~~Yl~~a~~~ 271 (511)
++.|++|||++|++..|++.+...
T Consensus 431 lL~allEL~~atq~~~~l~lA~~~ 454 (543)
T 2v8i_A 431 ALFALLDLYHASQVADYRKLAEKI 454 (543)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHH
Confidence 689999999999999999988763
No 38
>2wj9_A ARDB, intergenic-region protein; antirestriction, hydrolase inhibitor; 1.62A {Escherichia coli}
Probab=29.85 E-value=83 Score=28.49 Aligned_cols=86 Identities=15% Similarity=0.137 Sum_probs=46.0
Q ss_pred HHHHHhccC-CCCeEEE--EcCCCCCCCCCCCCCCCC--CCCceEEEeCCC----CcchHHHHHHHHHHHHhccccccCC
Q 042201 136 TDFILRAHT-SPTTLYT--QVGDGNADHQCWERPEDM--DTPRTLYRITSD----SPGSEAAAESAAALAAASIVFKKVD 206 (511)
Q Consensus 136 ~D~llkm~~-~~g~~y~--~Vg~~~~dh~~w~~Pe~~--~~~R~~~~~~~~----~p~s~~a~~~AAalA~as~vfk~~D 206 (511)
-.|+.|+-+ -+|+++. ++.++ ..+..|+.. ...|+......+ .-+.+++|-++..+|.....++.-.
T Consensus 78 y~~m~rlc~dY~GG~WeF~~LSNG----G~ymaP~~~~~~~e~~~l~n~~Ngf~~evSAdAAGIiaTL~alshla~~~e~ 153 (181)
T 2wj9_A 78 FGWMDRLCENYCGGIWNLYTLNNG----GAFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTEC 153 (181)
T ss_dssp HHHHHHHC---C--CEEEEEETTS----CEEEEEC------CCEEEEETTTTEEEEECHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhccccCCCeeEEEEecCC----eeEEecCCCCCCCceEEEEecCCCCCceECHHHHHHHHHHHHHHHHHcccch
Confidence 457777744 3677655 45443 234456532 234554433221 2346888888877777766555433
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCC
Q 042201 207 SIYSSRLLNHSKSLFEFADKHRG 229 (511)
Q Consensus 207 ~~yA~~~l~~A~~a~~~a~~~~~ 229 (511)
+ .+.++--++-+||.+||.
T Consensus 154 d----~l~e~y~~LRdYA~~HpE 172 (181)
T 2wj9_A 154 Y----AMTVHYYRLRDYALQHPE 172 (181)
T ss_dssp H----HHHHHHHHHHHHHHHSTT
T ss_pred H----HHHHHHHHHHHHHHhCcc
Confidence 4 444444577799999985
Done!