Query 042207
Match_columns 518
No_of_seqs 225 out of 2211
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 06:15:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042207.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042207hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vte_A Tetrahydrocannabinolic 100.0 3.3E-91 1.1E-95 740.0 52.1 507 2-512 1-516 (518)
2 3fw9_A Reticuline oxidase; BI- 100.0 3E-87 1E-91 708.3 49.5 489 7-510 1-495 (495)
3 3tsh_A Pollen allergen PHL P 4 100.0 1.6E-82 5.5E-87 678.5 46.3 491 2-511 5-498 (500)
4 3rja_A Carbohydrate oxidase; p 100.0 3.1E-76 1.1E-80 623.2 40.1 456 7-509 2-472 (473)
5 3pop_A GILR oxidase; FAD bindi 100.0 1.2E-73 3.9E-78 606.0 44.7 454 22-508 7-501 (501)
6 2y3s_A TAML; oxidoreductase; H 100.0 1.5E-69 5E-74 579.3 47.2 472 5-509 14-528 (530)
7 2ipi_A Aclacinomycin oxidoredu 100.0 9.4E-69 3.2E-73 573.0 48.1 459 6-509 19-520 (521)
8 2wdx_A Putative hexose oxidase 100.0 3.4E-69 1.2E-73 576.2 43.7 456 9-508 24-523 (523)
9 1zr6_A Glucooligosaccharide ox 100.0 2.8E-69 9.5E-74 575.2 42.2 466 3-517 4-486 (503)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 1.6E-66 5.5E-71 549.4 37.4 439 22-508 11-456 (459)
11 1w1o_A Cytokinin dehydrogenase 100.0 1.6E-41 5.6E-46 364.6 35.2 224 4-245 30-264 (534)
12 2exr_A Cytokinin dehydrogenase 100.0 3.2E-35 1.1E-39 314.2 37.3 200 47-251 53-263 (524)
13 4bby_A Alkyldihydroxyacetoneph 100.0 1.2E-35 4.1E-40 325.6 22.5 219 25-250 181-408 (658)
14 1wvf_A 4-cresol dehydrogenase 100.0 2.7E-33 9.4E-38 299.8 35.3 199 52-254 53-268 (520)
15 4feh_A Oxidoreductase DPRE1; a 100.0 1.4E-32 4.6E-37 289.9 37.7 200 46-252 34-238 (481)
16 3pm9_A Putative oxidoreductase 100.0 1.3E-33 4.5E-38 297.6 20.7 204 47-252 43-253 (476)
17 2vfr_A Xylitol oxidase, aldito 100.0 1.9E-31 6.4E-36 278.6 31.7 175 47-232 12-189 (422)
18 2uuu_A Alkyldihydroxyacetoneph 100.0 2.2E-32 7.4E-37 294.6 22.1 200 51-251 133-339 (584)
19 2i0k_A Oxidoreductase; MIX alp 100.0 2.2E-30 7.7E-35 278.7 19.0 198 24-232 9-227 (561)
20 1e8g_A Vanillyl-alcohol oxidas 100.0 2.5E-29 8.6E-34 270.8 24.9 201 52-254 67-300 (560)
21 3js8_A Cholesterol oxidase; ch 100.0 1.6E-29 5.3E-34 266.5 18.9 188 31-230 11-221 (540)
22 1f0x_A DLDH, D-lactate dehydro 100.0 3.8E-29 1.3E-33 267.5 15.5 197 52-251 42-297 (571)
23 3i99_A UDP-N-acetylenolpyruvoy 99.9 7.3E-26 2.5E-30 228.0 12.4 165 51-228 26-199 (357)
24 3tx1_A UDP-N-acetylenolpyruvoy 99.9 1.4E-25 4.9E-30 223.8 13.7 163 52-228 51-217 (322)
25 1hsk_A UDP-N-acetylenolpyruvoy 99.9 1.2E-24 4.2E-29 218.4 12.0 159 52-226 45-209 (326)
26 1uxy_A MURB, uridine diphospho 99.9 5E-24 1.7E-28 214.1 16.2 164 52-228 11-183 (340)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.9 3.5E-23 1.2E-27 200.8 8.1 152 53-227 20-173 (268)
28 2yvs_A Glycolate oxidase subun 99.8 1E-19 3.5E-24 171.5 12.0 118 113-236 1-124 (219)
29 1ffv_C CUTM, flavoprotein of c 98.2 5.5E-06 1.9E-10 81.1 10.1 159 54-226 3-177 (287)
30 1n62_C Carbon monoxide dehydro 97.6 0.00011 3.6E-09 72.0 7.3 155 54-225 3-176 (288)
31 2w3s_A Xanthine dehydrogenase; 97.1 0.00048 1.6E-08 71.6 6.2 150 58-225 179-345 (462)
32 1t3q_C Quinoline 2-oxidoreduct 96.4 0.0043 1.5E-07 60.4 6.9 150 54-223 3-173 (288)
33 3nvz_B Xanthine dehydrogenase/ 96.1 0.0073 2.5E-07 59.3 6.6 153 55-223 9-188 (305)
34 3hrd_C Nicotinate dehydrogenas 93.1 0.11 3.7E-06 50.6 5.9 75 56-135 3-82 (296)
35 1rm6_B 4-hydroxybenzoyl-COA re 89.1 0.39 1.3E-05 47.2 5.2 75 54-136 4-84 (324)
36 4bby_A Alkyldihydroxyacetoneph 74.7 1.3 4.5E-05 48.0 2.6 28 474-501 625-653 (658)
37 3unc_A Xanthine dehydrogenase/ 73.0 2.9 0.0001 48.9 5.1 78 55-138 232-313 (1332)
38 1e8g_A Vanillyl-alcohol oxidas 72.2 5.5 0.00019 42.1 6.7 34 482-515 523-556 (560)
39 3pm9_A Putative oxidoreductase 52.7 14 0.00046 38.2 5.1 28 474-501 443-471 (476)
40 1xty_A PTH, peptidyl-tRNA hydr 51.2 17 0.00059 29.7 4.5 42 47-90 48-90 (120)
41 2i0k_A Oxidoreductase; MIX alp 48.7 7.9 0.00027 40.9 2.6 22 482-503 533-554 (561)
42 1f0x_A DLDH, D-lactate dehydro 40.1 15 0.0005 38.9 3.0 27 480-507 535-561 (571)
43 3p04_A Uncharacterized BCR; SE 39.6 28 0.00095 26.8 3.7 36 55-112 5-40 (87)
44 1rlk_A Hypothetical protein TA 37.3 32 0.0011 28.0 4.0 42 47-90 45-87 (117)
45 1rzw_A Protein AF2095(GR4); be 36.5 48 0.0016 27.2 5.0 42 47-90 42-84 (123)
46 1wn2_A Peptidyl-tRNA hydrolase 35.7 50 0.0017 27.0 5.0 42 47-90 49-91 (121)
47 3js8_A Cholesterol oxidase; ch 35.0 15 0.00051 38.5 2.0 23 481-503 511-533 (540)
48 2kxh_B Peptide of FAR upstream 35.0 19 0.00064 21.6 1.6 19 480-498 10-28 (31)
49 2zv3_A PTH, peptidyl-tRNA hydr 34.1 59 0.002 26.3 5.1 42 47-90 43-85 (115)
50 1q7s_A BIT1, protein CGI-147; 32.7 53 0.0018 26.7 4.6 41 47-89 45-86 (117)
51 3zyv_A AOH1; oxidoreductase, m 32.3 28 0.00097 40.8 4.0 79 57-139 241-321 (1335)
52 2uuu_A Alkyldihydroxyacetoneph 31.0 19 0.00065 38.2 2.0 28 475-502 552-580 (584)
53 3fbi_A Mediator of RNA polymer 28.4 32 0.0011 26.3 2.3 16 479-494 23-39 (84)
54 2gvs_A Chemosensory protein CS 27.0 24 0.00082 28.4 1.5 14 488-501 84-97 (109)
55 2ki0_A DS119; beta-alpha-beta, 26.1 29 0.001 20.7 1.3 26 61-86 10-35 (36)
56 2g2c_A Putative molybdenum cof 24.6 1.2E+02 0.0042 25.9 5.9 40 57-96 47-86 (167)
57 1k19_A Chemosensory protein CS 23.5 28 0.00095 28.1 1.3 14 488-501 82-95 (112)
58 1mkz_A Molybdenum cofactor bio 21.9 1.5E+02 0.0052 25.5 6.0 40 57-96 46-86 (172)
59 2nu8_A Succinyl-COA ligase [AD 21.6 64 0.0022 30.6 3.7 79 55-142 89-169 (288)
60 2lnd_A De novo designed protei 21.2 87 0.003 23.3 3.5 34 57-90 29-62 (112)
61 3rfq_A Pterin-4-alpha-carbinol 20.9 1.6E+02 0.0055 25.8 5.9 40 57-96 67-106 (185)
62 1yht_A DSPB; beta barrel, hydr 20.7 64 0.0022 31.8 3.6 28 63-90 92-121 (367)
No 1
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=3.3e-91 Score=739.97 Aligned_cols=507 Identities=52% Similarity=0.941 Sum_probs=431.0
Q ss_pred cchhhhHHHHhccCCCCCCCcccceEecCCCCchhhHHhhcccccccccCCCCCCcEEEecCCHHHHHHHHHHHHHcCCe
Q 042207 2 ADAQENFLQCLLQNSDNSTTSISKVIYTQNNSSYSSILDFTIQNRRFLTAATPKPQVIVKPLQVSHIQSVIFCSQWHGMQ 81 (518)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~~~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~ 81 (518)
+..+++|.+||+..+..+ ..+++.|++|+|+.|++++.+|++|.||+.....+|.+||+|++++||+++|++|+++++|
T Consensus 1 ~~~~~~f~~c~~~~~~~~-~~~~~~v~~p~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~ 79 (518)
T 3vte_A 1 ANPRENFLKCFSKHIPNN-VANPKLVYTQHDQLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQ 79 (518)
T ss_dssp CCHHHHHHHHHHHHCCC-----CCCEECTTSTTHHHHHHHTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTCE
T ss_pred CChhHHHHHHHHhcCCcc-CCCCceEECCCCcchHHHHhhhhcccccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCCc
Confidence 457899999999887644 3778999999999999998889999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCCCcccCCCeEEEEccCCcceEEeCCCcEEEEeCCCcHHHHHHHHHhhCCCceecCCCCCCccchhhhc
Q 042207 82 VRVRSGGHDYEGLSYISHVPYVVIDLINLRSISIDVEKTTAWIQAGATIGELYHKIADTSGTLGFPAGVCPSVGVGGHFS 161 (518)
Q Consensus 82 ~~~~g~Gh~~~g~~~~~~~~~vvidl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ 161 (518)
|++||||||+.|.+.....++|+|||++|++|++|++.++++||||+++++|+++|.++|++|.+++|.|++|||||+++
T Consensus 80 v~vrggGh~~~g~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~ 159 (518)
T 3vte_A 80 IRTRSGGHDAEGMSYISQVPFVVVDLRNMHSIKIDVHSQTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFS 159 (518)
T ss_dssp EEEESSCCCTTCTTTCCSSSEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCTTEECCCCSCTTCBHHHHHH
T ss_pred EEEECCCcCCCCCccCCCCCeEEEECCCCceeEEeCCCCEEEEeCCccHHHHHHHHHHhCCCceecCCCCCCeeeeeeeC
Confidence 99999999998877532224999999999999999999999999999999999999999878889999999999999999
Q ss_pred CCCCCCccccCCccccceeEEEEEeeCCeEEeccCCCchhHHHhhccCCCCeEEEEEEEEEEEecCCeeEEEEEeechh-
Q 042207 162 GGGYGILLRKYGLAADHVVDAHLVDVKGRLLDRKSMGEDLFWAIRGGGGASFGVIVAWKVELVTIPSTVTVCSSRRSLK- 240 (518)
Q Consensus 162 ggg~g~~~~~~G~~~d~v~~~~vV~~~G~i~~~~~~~~dl~~a~rg~~~g~~Givt~~~~~l~~~~~~~~~~~~~~~~~- 240 (518)
|||+|+++++||+++|+|++++||++||++++...+++|||||+||||+|+|||||+++|||+|.|+.+..|.+.+.++
T Consensus 160 gGg~G~~s~~~G~~~D~V~~~evV~adG~iv~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~ 239 (518)
T 3vte_A 160 GGGYGALMRNYGLAADNIIDAHLVNVDGKVLDRKSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEI 239 (518)
T ss_dssp TCCCCTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCH
T ss_pred CCCCccccCCCCchhheEEEEEEEccCCeEEEeeccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCH
Confidence 9999999999999999999999999999999743468999999999867899999999999999999877788877654
Q ss_pred hhHHHHHHHHHHhhhccCCCceEEEEEeccccC---CCCCceEEEEEEEEEeCCccCchhhhhhhcCcCCCccccceecc
Q 042207 241 RNLTRLVHRWQFVADKFDEDLITGVFLSSVNAS---TGGNRTVIASFESVFLGGVDGVIPLMQKSFPELGLVEKECTETS 317 (518)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~g~~~~~i~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~s 317 (518)
+++.+++.+|+++++++|+++++.+.+...++. +.+...+.+.+.++|+|+.+++.++|++.|++++....++.+++
T Consensus 240 ~~~~~~l~~~~~~~~~~p~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~ 319 (518)
T 3vte_A 240 HGLVKLFNKWQNIAYKYDKDLVLMTHFITKNITDNHGKNKTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEFS 319 (518)
T ss_dssp HHHHHHHHHHHHHGGGSCTTEEEEEEEEEESCC-------CEEEEEEEEEEESCHHHHHHHHHHHCGGGCCCGGGEEEEC
T ss_pred HHHHHHHHHHHHHHHcCCHhHeEEEEEcccCCCCCCCcCCCceEEEEEEEEeCCHHHHhhhhhhhhhhcCCCccceeecc
Confidence 557889999999999999999998888753221 11223456788899999999998888887777877667789999
Q ss_pred HHHHHHhhhcCCCC-cc---hhhhccCCCcccccceecccCccCCCCHHHHHHHHHHHhhCCCCceEEEEEecCCccCCC
Q 042207 318 WVRAVLHHARFPIE-AS---LDVLLNRSPVTKRFYKAKSDYVREPMPEIAFEGIFELFNEKEGGNAEIMLVPYGGKMSEI 393 (518)
Q Consensus 318 ~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~l~~~~~~~~~~~s~i~~~~~GGav~~v 393 (518)
|++.+.+++++..+ .+ ++.+.++......|+|.|+.|+.+++++++++.+++.+.+.+.+.+.+.++++||+++++
T Consensus 320 w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~v~~~~~GGa~~~v 399 (518)
T 3vte_A 320 WIDTTIFYSGVVNFNTANFKKEILLDRSAGKKTAFSIKLDYVKKPIPETAMVKILEKLYEEDVGAGMYVLYPYGGIMEEI 399 (518)
T ss_dssp HHHHHHHTSSSCCC-----CGGGGGCTTCSCCBEEEEEEEEESSCCCHHHHHHHHHGGGGSCTTTEEEEEEECCGGGGTS
T ss_pred hhhhhhhhhcCCccCCccchhhhhccCCcCcccceeeechhcccCCCHHHHHHHHHHHHhCCCCCeEEEEeecCccccCC
Confidence 99998887755433 22 344444433334567889999988899999999999887644345789999999999999
Q ss_pred CCCCCCcccccCCeeEEEEEEEeCCCCchhHHHHHHHHHHHHhhhcccccCCCCccccCCCCcccc-ccccCCccccccc
Q 042207 394 PESAIPFPHRAGNIYKMSPVVYWYEEGSETAERHINWIRKLHSFLTPFVSKNPRASYINYRDIDIG-ANKIRGYTSYKQA 472 (518)
Q Consensus 394 ~~~~tAf~~Rd~~~~~~~~~~~W~d~~~~~~~~~~~wi~~~~~~l~p~~~~~~~~~Y~Ny~d~~~~-~~~~~~~~~~~~~ 472 (518)
++++|||+||++.+|.+++.+.|.++ +.++++.+|++++++.+.|+.++.++++|+||+|.+++ .+.. ...+++.+
T Consensus 400 ~~~~TAf~hR~~~~~~~~~~~~w~~~--~~~~~~~~w~~~~~~~~~p~~~~~~~g~YvNy~D~dl~~~~~~-~~~~~~~~ 476 (518)
T 3vte_A 400 SESAIPFPHRAGIMYELWYTASWEKQ--EDNEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTNHA-SPNNYTQA 476 (518)
T ss_dssp CTTSSSCCCCTTCCEEEEEEEEECCT--TTHHHHHHHHHHHHHHTGGGSCCTTCCCCTTSCCGGGCCCCTT-SCCCHHHH
T ss_pred CCCCCcccccCcceEEEEEEEecCCc--chhHHHHHHHHHHHHHhccccCCCCccccccCCCccccccccc-cccchhhh
Confidence 99999999999558999999999775 56678999999999999998655557899999998876 2100 12334455
Q ss_pred chhhhhhhcccHHHHHHHHhhcCCCCCCcCCCCCCCcccc
Q 042207 473 SIWGRKYFRNNFDRLVVVKTMVDPHNFFRNEQSIPSLSSW 512 (518)
Q Consensus 473 ~~~~~~y~G~n~~RL~~IK~kYDP~~vF~~~~~i~~~~~~ 512 (518)
+.|+++|||+||+||++||+||||+|||+++|||||.++|
T Consensus 477 ~~w~~~Yyg~N~~RL~~vK~~yDP~n~F~~~QsI~p~~~~ 516 (518)
T 3vte_A 477 RIWGEKYFGKNFNRLVKVKTKVDPNNFFRNEQSIPPLPPH 516 (518)
T ss_dssp HHHHHHHSSTHHHHHHHHHHHHCTTCCSCCTTCCCCCCTT
T ss_pred hhHHHHHhHhHHHHHHHHHhhcCchhcccCCCCCCCCCCC
Confidence 6799999999999999999999999999999999999885
No 2
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=3e-87 Score=708.29 Aligned_cols=489 Identities=40% Similarity=0.760 Sum_probs=418.7
Q ss_pred hHHHHhccCCCCCCCcccceEecCCCCchhhHHhhcccccccccCCCCCCcEEEecCCHHHHHHHHHHHHHcCCeEEEEe
Q 042207 7 NFLQCLLQNSDNSTTSISKVIYTQNNSSYSSILDFTIQNRRFLTAATPKPQVIVKPLQVSHIQSVIFCSQWHGMQVRVRS 86 (518)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~~~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g 86 (518)
+|++||+.....+ ++.|++|+|+.|++++..+++|.||+....+.|.+|++|++++||+++|++|+++++||++||
T Consensus 1 ~~~~cl~~~~~~~----~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrG 76 (495)
T 3fw9_A 1 DLLSCLTFNGVRN----HTVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRS 76 (495)
T ss_dssp CHHHHHHHTTCCC----EEECCCCTTCHHHHHHHHTCCCGGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEES
T ss_pred ChhHHHhhcCCCC----CCeEECCCCCchHHHHhhhhhhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 5899999887542 689999999999999877889999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccCCCeEEEEccCCcceEEeCCCcEEEEeCCCcHHHHHHHHHhhCCCceecCCCCCCccchhhhcCCCCC
Q 042207 87 GGHDYEGLSYISHVPYVVIDLINLRSISIDVEKTTAWIQAGATIGELYHKIADTSGTLGFPAGVCPSVGVGGHFSGGGYG 166 (518)
Q Consensus 87 ~Gh~~~g~~~~~~~~~vvidl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g 166 (518)
||||+.|.+...+.++++|||++|++|++|+++++|+||||+++++|+++|.++|.+|.+++|.|+++||||+++|||+|
T Consensus 77 gGh~~~g~~~~~~~ggvvIdl~~m~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgigG~~~gGg~G 156 (495)
T 3fw9_A 77 GGHSYEGLSYTSDTPFILIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGGFG 156 (495)
T ss_dssp SCCCTTCTTSCCSSCEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCSSEECCCCSCTTCBHHHHHHTCCCC
T ss_pred CCcCCCCccccCCCCeEEEECCCCCcEEEeCCCCEEEEcCCCCHHHHHHHHHHhcCCceeccCCCCCCeEeeeccCCCCc
Confidence 99999888776433589999999999999999999999999999999999999976788999999999999999999999
Q ss_pred CccccCCccccceeEEEEEeeCCeEEeccCCCchhHHHhhccCCCCeEEEEEEEEEEEecCCeeEEEEEeechh-hhHHH
Q 042207 167 ILLRKYGLAADHVVDAHLVDVKGRLLDRKSMGEDLFWAIRGGGGASFGVIVAWKVELVTIPSTVTVCSSRRSLK-RNLTR 245 (518)
Q Consensus 167 ~~~~~~G~~~d~v~~~~vV~~~G~i~~~~~~~~dl~~a~rg~~~g~~Givt~~~~~l~~~~~~~~~~~~~~~~~-~~~~~ 245 (518)
+++++||+++|+|++++||++||+++++..+++||||++|||++|+|||||+++|||+|.|+.+..+.+.++.+ +++.+
T Consensus 157 ~~~~~~G~~~D~v~~~~vV~adG~i~~~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~ 236 (495)
T 3fw9_A 157 MMSRKYGLAADNVVDAILIDANGAILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATS 236 (495)
T ss_dssp TTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHH
T ss_pred ccccCCCchhheEEEEEEEcCCCCEEEcCCCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHH
Confidence 99999999999999999999999999844568999999999667899999999999999999888888777654 55788
Q ss_pred HHHHHHHhhhccCCCceEEEEEeccccCCCCCceEEEEEEEEEeCCccCchhhhhhhcCcCCCccccceeccHHHHHHhh
Q 042207 246 LVHRWQFVADKFDEDLITGVFLSSVNASTGGNRTVIASFESVFLGGVDGVIPLMQKSFPELGLVEKECTETSWVRAVLHH 325 (518)
Q Consensus 246 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~i~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~s~~~~~~~~ 325 (518)
++.+|+++++.+|+++++.+..... ...+.+.+.++|+|+++++.++|++.|+.++....++.+++|.+.+.++
T Consensus 237 ~l~~~~~~~~~~~~~l~~~~~~~~~------~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~~~~~~~~~ 310 (495)
T 3fw9_A 237 LLHKWQFVAEELEEDFTLSVLGGAD------EKQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGESFAYL 310 (495)
T ss_dssp HHHHHHHHHHHSCTTEEEEEEEEEE------TTEEEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHH
T ss_pred HHHHHHHHHhcCChhHeEEEEEcCC------CCceEEEEEEEEeCCHHHHHHHHHHhhhhcCCCccceEEcCHHHHHHHH
Confidence 9999999999999999987764311 1234678889999999999888888777787766788999999988877
Q ss_pred hcCCCCcchhhhccCCCc-ccccceecccCccCCCCHHHHHHHHHHHhhCCCCceEEEEEecCCccCCCCCCCCCccccc
Q 042207 326 ARFPIEASLDVLLNRSPV-TKRFYKAKSDYVREPMPEIAFEGIFELFNEKEGGNAEIMLVPYGGKMSEIPESAIPFPHRA 404 (518)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~l~~~~i~~l~~~~~~~~~~~s~i~~~~~GGav~~v~~~~tAf~~Rd 404 (518)
+++.. ++.+.++... ...++|.|+.|+.+++++++++.+++.+.+.+. +.+.++++||+++++++++|||+||+
T Consensus 311 ~~~~~---~~~l~~~~~~~~~~~~~~ks~~~~~~l~~~~i~~l~~~~~~~~~--~~~~~~~~GGa~~~v~~~~TAf~hR~ 385 (495)
T 3fw9_A 311 AGLET---VSQLNNRFLKFDERAFKTKVDLTKEPLPSKAFYGLLERLSKEPN--GFIALNGFGGQMSKISSDFTPFPHRS 385 (495)
T ss_dssp TTCSC---GGGGGCTTSCSCCCEEEEEEEECSSCCCHHHHHHHHHHHHHCTT--EEEEEEECCGGGGTSCTTTSSCCCCT
T ss_pred hcccc---hhhhcCCCCCccCcceeEeehhhcCCCCHHHHHHHHHHHhhCCC--cEEEecccCCccccCCCCCCCccccC
Confidence 64322 2333333322 346788899999989999999999998876653 67999999999999999999999998
Q ss_pred CCeeEEEEEEEeCCCCchhHHHHHHHHHHHHhhhcccccCCCCccccCCCCcccccccc----CCcccccccchhhhhhh
Q 042207 405 GNIYKMSPVVYWYEEGSETAERHINWIRKLHSFLTPFVSKNPRASYINYRDIDIGANKI----RGYTSYKQASIWGRKYF 480 (518)
Q Consensus 405 ~~~~~~~~~~~W~d~~~~~~~~~~~wi~~~~~~l~p~~~~~~~~~Y~Ny~d~~~~~~~~----~~~~~~~~~~~~~~~y~ 480 (518)
+.+|.+++.+.|.+++++.++++.+|++++++.+.|+.++.++++|+||+|.+++.+.. -...+++.++.|+++||
T Consensus 386 ~~~~~~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~p~~~~~~~~~Y~Ny~d~dl~~~~~~~~~~~~~~~~~~~~w~~~Yy 465 (495)
T 3fw9_A 386 GTRLMVEYIVAWNQSEQKKKTEFLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEISRSWGESYF 465 (495)
T ss_dssp TCCEEEEEEEEECGGGGGGHHHHHHHHHHHHHHHGGGSCCSSCCCCGGGCCGGGCCCCTTCHHHHHTHHHHHHHHHHHHH
T ss_pred ccceEEEEEEecCCCCcchhHHHHHHHHHHHHHHhhhccCCCcccccCccCccccccccccccccccccchhhhhHHHHh
Confidence 66899999999976433566789999999999999997655568999999988752100 00123334557999999
Q ss_pred cccHHHHHHHHhhcCCCCCCcCCCCCCCcc
Q 042207 481 RNNFDRLVVVKTMVDPHNFFRNEQSIPSLS 510 (518)
Q Consensus 481 G~n~~RL~~IK~kYDP~~vF~~~~~i~~~~ 510 (518)
|+||+||++||+||||+|||+++|||||..
T Consensus 466 g~n~~RL~~vK~~yDP~n~F~~~qsI~p~~ 495 (495)
T 3fw9_A 466 LSNYERLIRAKTLIDPNNVFNHPQSIPPMA 495 (495)
T ss_dssp GGGHHHHHHHHHHHCTTCCSCCTTCCCCCC
T ss_pred HhHHHHHHHHHHhhCcHhhCCCCCCCCCCC
Confidence 999999999999999999999999999863
No 3
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=1.6e-82 Score=678.51 Aligned_cols=491 Identities=44% Similarity=0.878 Sum_probs=408.5
Q ss_pred cchhhhHHHHhccCCCCCCCcccceEecCCCCchhhHHhhcccccccccCCCCCCcEEEecCCHHHHHHHHHHHHHcCCe
Q 042207 2 ADAQENFLQCLLQNSDNSTTSISKVIYTQNNSSYSSILDFTIQNRRFLTAATPKPQVIVKPLQVSHIQSVIFCSQWHGMQ 81 (518)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~~~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~ 81 (518)
..++++|.+||...+ ++..|++|+++.|++++.++.+|.||+....++|.+||+|++++||+++|++|+++++|
T Consensus 5 ~~~~~~f~~~L~~~~------~~~~v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~ 78 (500)
T 3tsh_A 5 PAAKEDFLGCLVKEI------PPRLLYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVR 78 (500)
T ss_dssp ----CHHHHHHHHHS------CGGGEEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTCE
T ss_pred cccHHHHHHHHHhhC------CCCEEECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCCc
Confidence 457899999999777 24689999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCCCccc--CCCeEEEEccCCcceEEeCCCcEEEEeCCCcHHHHHHHHHhhCCCceecCCCCCCccchhh
Q 042207 82 VRVRSGGHDYEGLSYIS--HVPYVVIDLINLRSISIDVEKTTAWIQAGATIGELYHKIADTSGTLGFPAGVCPSVGVGGH 159 (518)
Q Consensus 82 ~~~~g~Gh~~~g~~~~~--~~~~vvidl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~ 159 (518)
|++|||||++.|.+.+. .+++++|||++||+|++|+++++++||||+++++|+++|.++|..+.+++|.|++||+||+
T Consensus 79 ~~~r~gGh~~~g~s~~~~~~~~~~~idl~~~~~v~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~ 158 (500)
T 3tsh_A 79 IRVRSGGHDYEGLSYRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGN 158 (500)
T ss_dssp EEEESSCCCTTCTTTCCSSSCCEEEEECTTCCCEEEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHH
T ss_pred EEEEcCCcCCCCCcCCCCCcCCeEEEECcCCCCEEECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCc
Confidence 99999999998876542 1258999999999999999999999999999999999999999888889999999999999
Q ss_pred hcCCCCCCccccCCccccceeEEEEEeeCCeEEeccCCCchhHHHhhccCCCCeEEEEEEEEEEEecCCeeEEEEEeech
Q 042207 160 FSGGGYGILLRKYGLAADHVVDAHLVDVKGRLLDRKSMGEDLFWAIRGGGGASFGVIVAWKVELVTIPSTVTVCSSRRSL 239 (518)
Q Consensus 160 ~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~i~~~~~~~~dl~~a~rg~~~g~~Givt~~~~~l~~~~~~~~~~~~~~~~ 239 (518)
++|||+|.++++||+++|+|+++|||++||+|++...+++||||++||||+|+|||||+++||++|+|+.+..+...+..
T Consensus 159 ~~~gg~g~~~~~~G~~~d~v~~~~vV~a~G~i~~~~~~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~ 238 (500)
T 3tsh_A 159 FAGGGFGMLLRKYGIAAENVIDVKLVDANGKLHDKKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTV 238 (500)
T ss_dssp HHTCCCCTTHHHHCCGGGGEEEEEEECTTSCEECHHHHCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEET
T ss_pred cccccCCccccccCChhhheeeEEEECCCceEEECCCCChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCc
Confidence 99999999999999999999999999999999985567899999999888899999999999999999988777777766
Q ss_pred hhhHHHHHHHHHHhhhccCCCceEEEEEeccccCCCCCceEEEEEEEEEeCCccCchhhhhhhcCcCCCccccceeccHH
Q 042207 240 KRNLTRLVHRWQFVADKFDEDLITGVFLSSVNASTGGNRTVIASFESVFLGGVDGVIPLMQKSFPELGLVEKECTETSWV 319 (518)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~i~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~s~~ 319 (518)
.+.+.+++.+|+.+.+.+|+++...+..... ...+.++|.|+.+++.+++.+.+..++.....+..++|.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----------~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 308 (500)
T 3tsh_A 239 SEGAVDIINKWQVVAPQLPADLMIRIIAQGP----------KATFEAMYLGTCKTLTPLMSSKFPELGMNPSHCNEMSWI 308 (500)
T ss_dssp TTTHHHHHHHHHHHGGGSCTTEEEEEEESSS----------EEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHH
T ss_pred HHHHHHHHHHHHHhhhccChhhEEEEEecCC----------CcEEEEEEecchhhhhhhhhhcchhccCCccccchhhhh
Confidence 6667788999999999999998876654321 456778899998888887777777777766677788888
Q ss_pred HHHHhhhcCCCCcchhhhccCCCcccccceecccCccCCCCHHHHHHHHHHHhhCCCCceEEEEEecCCccCCCCCCCCC
Q 042207 320 RAVLHHARFPIEASLDVLLNRSPVTKRFYKAKSDYVREPMPEIAFEGIFELFNEKEGGNAEIMLVPYGGKMSEIPESAIP 399 (518)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~l~~~~~~~~~~~s~i~~~~~GGav~~v~~~~tA 399 (518)
+.+.+...............+......+.+.++.++.++++++.++.+++.+...+. ...++++++||+++++++++++
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Gga~~~~~~~ata 387 (500)
T 3tsh_A 309 QSIPFVHLGHRDALEDDLLNRQNSFKPFAEYKSDYVYQPFPKTVWEQILNTWLVKPG-AGIMIFDPYGATISATPESATP 387 (500)
T ss_dssp HHHHHHHHCCSSCHHHHHHCCCCCCCCEEEEEEEEECSCCCHHHHHHHHHTGGGSTT-CCEEEEEECCHHHHHSCTTSSS
T ss_pred ccchhhhhccccccccccccccccccchhhhhhhhhcccCcHHHHHHHHHHhhcCCC-ceEEEEcccCccccCCCCccCc
Confidence 877654422222222233333333344555667777778999888888876654433 3567789999999999999999
Q ss_pred cccccCCeeEEEEEEEeCCCCchhHHHHHHHHHHHHhhhcccccCCCCccccCCCCccccccccC-Ccccccccchhhhh
Q 042207 400 FPHRAGNIYKMSPVVYWYEEGSETAERHINWIRKLHSFLTPFVSKNPRASYINYRDIDIGANKIR-GYTSYKQASIWGRK 478 (518)
Q Consensus 400 f~~Rd~~~~~~~~~~~W~d~~~~~~~~~~~wi~~~~~~l~p~~~~~~~~~Y~Ny~d~~~~~~~~~-~~~~~~~~~~~~~~ 478 (518)
|+||++.+|++++...|.++ +.+++..+|++++++.++|+..+.+.++|+||+|.+++..... ....+...+.|++.
T Consensus 388 ~~~R~~~l~~i~~~~~w~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~Ny~D~dlg~~~~~~~~~~~~~~~~w~~~ 465 (500)
T 3tsh_A 388 FPHRKGVLFNIQYVNYWFAP--GAAAAPLSWSKDIYNYMEPYVSKNPRQAYANYRDIDLGRNEVVNDVSTYASGKVWGQK 465 (500)
T ss_dssp CCCCTTCCEEEEEEEEECST--TCCHHHHHHHHHHHHHHGGGSCCSSCCCCTTSCCGGGCCCCEETTEECHHHHHHHHHH
T ss_pred CcccCCcEEEEEEEEecCCc--chhHHHHHHHHHHHHHHHHHhcCCCCeEEeccccccccccccccccccccccchHHHH
Confidence 99999777888899999887 4457889999999999999876566789999999987642210 11223344589999
Q ss_pred hhcccHHHHHHHHhhcCCCCCCcCCCCCCCccc
Q 042207 479 YFRNNFDRLVVVKTMVDPHNFFRNEQSIPSLSS 511 (518)
Q Consensus 479 y~G~n~~RL~~IK~kYDP~~vF~~~~~i~~~~~ 511 (518)
|||+||+||++||+||||+|+|+++|||||...
T Consensus 466 Y~g~Ny~RL~~IK~kyDP~nvF~~~qsI~Pl~~ 498 (500)
T 3tsh_A 466 YFKGNFERLAITKGKVDPTDYFRNEQSIPPLIK 498 (500)
T ss_dssp HHGGGHHHHHHHHHHHCTTCCSCCTTSCCCCCC
T ss_pred hhhHHHHHHHHHHHHhCcccccCCCCCCCCCCC
Confidence 999999999999999999999999999999864
No 4
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=3.1e-76 Score=623.20 Aligned_cols=456 Identities=21% Similarity=0.368 Sum_probs=370.5
Q ss_pred hHHHHhccCCCCCCCcccceEecCCCCchhhHHhhcccccccccCCCCCCcEEEecCCHHHHHHHHHHHHHcCCeEEEEe
Q 042207 7 NFLQCLLQNSDNSTTSISKVIYTQNNSSYSSILDFTIQNRRFLTAATPKPQVIVKPLQVSHIQSVIFCSQWHGMQVRVRS 86 (518)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~~~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g 86 (518)
+|++||+.+- ..|++|+|+.|++++. +||......|.+|++|+|++||+++|++|+++++||++||
T Consensus 2 ~l~~cl~~~~--------~~v~~p~~~~y~~~~~------~~n~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~g 67 (473)
T 3rja_A 2 AIEACLSAAG--------VPIDIPGTADYERDVE------PFNIRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKS 67 (473)
T ss_dssp HHHHHHHHTT--------CCBCCTTSHHHHHHTC------CSBTTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEES
T ss_pred hHHHHHHhCC--------CcEECCCCCchHHHHH------HhhcccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEc
Confidence 5899999653 4799999999998854 5777778999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccCCCeEEEEccCCcceE-EeCCCcEEEEeCCCcHHHHHHHHHhhCCCceecCCCCCCccchhhhcCCCC
Q 042207 87 GGHDYEGLSYISHVPYVVIDLINLRSIS-IDVEKTTAWIQAGATIGELYHKIADTSGTLGFPAGVCPSVGVGGHFSGGGY 165 (518)
Q Consensus 87 ~Gh~~~g~~~~~~~~~vvidl~~~~~i~-~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~ 165 (518)
||||+.|.+....+++|+|||++|++|. +|+++++++||||+++++|+++|.++| .+.++.|.|+++||||+++|||+
T Consensus 68 gGh~~~g~~~~~~~~~vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G-~~~~p~G~~~~vgvgG~~~ggg~ 146 (473)
T 3rja_A 68 GGHSYASFGFGGENGHLMVQLDRMIDVISYNDKTGIAHVEPGARLGHLATVLNDKY-GRAISHGTCPGVGISGHFAHGGF 146 (473)
T ss_dssp SCCCTTCGGGTSSSSCEEEECTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHHH-SEECCCCSCTTCBHHHHHHTCCC
T ss_pred CCCCCCCCcccCCCCeEEEECCCCCceEEEcCCCCEEEECCCCCHHHHHHHHHHcC-CEEeccCCCCCcEeeeeccCCCC
Confidence 9999986554322348999999999997 999999999999999999999999988 36778899999999999999999
Q ss_pred CCccccCCccccceeEEEEEeeCCeEEe-ccCCCchhHHHhhccCCCCeEEEEEEEEEEEecCCeeEEEEEeechh-h-h
Q 042207 166 GILLRKYGLAADHVVDAHLVDVKGRLLD-RKSMGEDLFWAIRGGGGASFGVIVAWKVELVTIPSTVTVCSSRRSLK-R-N 242 (518)
Q Consensus 166 g~~~~~~G~~~d~v~~~~vV~~~G~i~~-~~~~~~dl~~a~rg~~~g~~Givt~~~~~l~~~~~~~~~~~~~~~~~-~-~ 242 (518)
|..+++||+++|+|++++||++||++++ ++.+++||||++||| +|+|||||+++|||+|.|+....+.+.+.+. . +
T Consensus 147 G~~~~~~G~~~D~v~~~~vV~a~G~v~~~~~~~~~dLf~a~rG~-~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~ 225 (473)
T 3rja_A 147 GFSSHMHGLAVDSVVGVTVVLADGRIVEASATENADLFWGIKGA-GSNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTS 225 (473)
T ss_dssp CTTHHHHCCGGGGEEEEEEECTTSCEEEEETTBSHHHHHHHHHH-GGGTCEEEEEEEECEECCSCEEEEEEECCCCSHHH
T ss_pred CcccccccchHhheeeEEEEecCCeEEEeCCCCCcchhhcccCC-CCceEEEEEEEEEEEeCCCceEEEEEEecCccHHH
Confidence 9999999999999999999999999998 777899999999999 5899999999999999998777777777664 2 3
Q ss_pred HHHHHHHHHHhhh-ccCCCceEEEEEeccccCCCCCceEEEEEEEEEeCCccCchhhhhhhcCcCC-Cccccce-eccHH
Q 042207 243 LTRLVHRWQFVAD-KFDEDLITGVFLSSVNASTGGNRTVIASFESVFLGGVDGVIPLMQKSFPELG-LVEKECT-ETSWV 319 (518)
Q Consensus 243 ~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~g~~~~~i~~~~~~~G~~~~~~~~l~~~~~~l~-~~~~~~~-~~s~~ 319 (518)
+.+++++|+++.. ++|+++++.+.+. . . . .+.+.++|+|++++++++|++++..++ +...++. +++|.
T Consensus 226 ~~~~~~~~~~~~~~~~p~~l~~~~~~~-~-~-----~--~~~~~~~~~G~~~~~~~~l~pl~~~~p~~~~~~~~~~~~~~ 296 (473)
T 3rja_A 226 ALKGIEAVEDYARWVAPREVNFRIGDY-G-A-----G--NPGIEGLYYGTPEQWRAAFQPLLDTLPAGYVVNPTTSLNWI 296 (473)
T ss_dssp HHHHHHHHHHHHHHTCCTTEEEEEEES-S-S-----S--CCEEEEEEESCHHHHHHHHHHHHTTSCTTCEECCCEEECHH
T ss_pred HHHHHHHHHHHhhhCCChhHEEEEEEc-C-C-----C--cEEEEEEecCCHHHHHHHHHHHHHhCCCCcceeeecccCHH
Confidence 7789999999987 8999999887776 2 1 1 266778999999999888887544333 3445677 89999
Q ss_pred HHHHhhhcCCCCcchhhhccCCCcccccceecccCccCCCCHHHHHHHHHHHhhCC-C---CceEEEEEecCC---ccCC
Q 042207 320 RAVLHHARFPIEASLDVLLNRSPVTKRFYKAKSDYVREPMPEIAFEGIFELFNEKE-G---GNAEIMLVPYGG---KMSE 392 (518)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~l~~~~~~~~-~---~~s~i~~~~~GG---av~~ 392 (518)
+.+.++... .+.+.... . ...+++.++.+.. ++++++++.+++.+.+.. . ..+.++++++|| ++++
T Consensus 297 ~~~~~~~~~---~~~~~~~~--~-~~~~~~~ks~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ai~~ 369 (473)
T 3rja_A 297 ESVLSYSNF---DHVDFITP--Q-PVENFYAKSLTLK-SIKGDAVKNFVDYYFDVSNKVKDRFWFYQLDVHGGKNSQVTK 369 (473)
T ss_dssp HHHHHTSSS---SCCCCSSC--C-CCBEEEEEEEEES-CCTTHHHHHHHHHHHHTGGGCCSSEEEEEEEECCSTTCGGGG
T ss_pred HHHHhhhcC---CCcccccC--C-CCCcceEeccccC-CCCHHHHHHHHHHHHhcCCCCCCcceEEEEEecCCcchhhcC
Confidence 987765421 11111000 0 0234667787754 799999999999886421 1 234678999998 7888
Q ss_pred CCCCCCCcccccCCeeEEEEEEEeCC-CCchhHHHHHHHHHHHHhhhcccccCCCCccccCCCCccccccccCCcccccc
Q 042207 393 IPESAIPFPHRAGNIYKMSPVVYWYE-EGSETAERHINWIRKLHSFLTPFVSKNPRASYINYRDIDIGANKIRGYTSYKQ 471 (518)
Q Consensus 393 v~~~~tAf~~Rd~~~~~~~~~~~W~d-~~~~~~~~~~~wi~~~~~~l~p~~~~~~~~~Y~Ny~d~~~~~~~~~~~~~~~~ 471 (518)
++.++|||+||+ .+|.+++.+.|.+ + +.+++..+|++++++.+.+.......++|+||+|.+++.
T Consensus 370 v~~~~TAf~hR~-~~~~~~~~~~w~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~YvNy~d~~~~~----------- 435 (473)
T 3rja_A 370 VTNAETAYPHRD-KLWLIQFYDRYDNNQ--TYPETSFKFLDGWVNSVTKALPKSDWGMYINYADPRMDR----------- 435 (473)
T ss_dssp SCTTTSSCCCTT-CSEEEEEEEEECTTS--CCCTTTHHHHHHHHHHHHTTSCGGGEECCGGGCCCSSCH-----------
T ss_pred CCCCCCccccCC-ccEEEEEEEEeCCCC--ccchHHHHHHHHHHHHHHhhCCCCCCceEecCCCccccc-----------
Confidence 999999999999 6899999999963 3 122345566666555554332212357999999988641
Q ss_pred cchhhhhhhcccHHHHHHHHhhcCCCCCCcCCCCCCCc
Q 042207 472 ASIWGRKYFRNNFDRLVVVKTMVDPHNFFRNEQSIPSL 509 (518)
Q Consensus 472 ~~~~~~~y~G~n~~RL~~IK~kYDP~~vF~~~~~i~~~ 509 (518)
..|++.|||+||+||++||+||||+|+|+++|||+|.
T Consensus 436 -~~~~~~yyg~n~~RL~~vK~kyDP~n~F~~~qsI~p~ 472 (473)
T 3rja_A 436 -DYATKVYYGENLARLQKLKAKFDPTDRFYYPQAVRPV 472 (473)
T ss_dssp -HHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCC
T ss_pred -hhHHHHHHHHHHHHHHHHhhccCchhhCCCCcCCCCC
Confidence 2699999999999999999999999999999999985
No 5
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=1.2e-73 Score=605.96 Aligned_cols=454 Identities=22% Similarity=0.323 Sum_probs=356.0
Q ss_pred cccceEecCCCCchhhHHhhcccccccccCCCCCCcEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCC
Q 042207 22 SISKVIYTQNNSSYSSILDFTIQNRRFLTAATPKPQVIVKPLQVSHIQSVIFCSQWHGMQVRVRSGGHDYEGLSYISHVP 101 (518)
Q Consensus 22 ~~~~~v~~p~~~~y~~~~~~~~~n~~~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~g~~~~~~~~ 101 (518)
++.+.|++|+|+.|+++++ .||.+....|.+||+|++++||+++|++|+++++||++|||||++.+.+...+ +
T Consensus 7 s~~~~~~~p~~~~y~~~~~------~~n~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~-~ 79 (501)
T 3pop_A 7 SVPPFTVGREDPRYIELSH------SDNHRFVVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTPR-R 79 (501)
T ss_dssp --CCEEEETTSTTHHHHTC------CSCTTSCCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSSC-C
T ss_pred cCCCceECCCCcchHHHHH------HHhhccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccCC-C
Confidence 5688999999999999864 45555578999999999999999999999999999999999999988776542 4
Q ss_pred eEEEEccCCcceEEeCCCcEEEEeCCCcHHHHHHHHHh-hCCCceecCCCCCCccchhhhcCCCCCCccccCCcccccee
Q 042207 102 YVVIDLINLRSISIDVEKTTAWIQAGATIGELYHKIAD-TSGTLGFPAGVCPSVGVGGHFSGGGYGILLRKYGLAADHVV 180 (518)
Q Consensus 102 ~vvidl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~-~g~~l~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~ 180 (518)
+++|||++||+|++|++.++++||||+++++|+++|.+ +| +.++.|.|++|||||+++|||+|+++++||+++|+|+
T Consensus 80 gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~ 157 (501)
T 3pop_A 80 DLVLDLHNLHAIGPAADGAGVRVGSGATVDQVQKALFRRWN--AALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVDHLH 157 (501)
T ss_dssp SEEEECTTCCCEEECTTSSSEEEETTCBHHHHHHHHHHHHS--BCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGEE
T ss_pred EEEEEecccCCeEEcCCCCEEEEECCcCHHHHHHHHHhhcC--eEeCCCCCCCceEeeccccCCCcccccccccHHHhEE
Confidence 89999999999999999999999999999999999974 56 6778999999999999999999999999999999999
Q ss_pred EEEEEe--eCCe--EEe-c---cCCCchhHHHhhccCCCCeEEEEEEEEEE----------EecC-CeeEEEEEeechhh
Q 042207 181 DAHLVD--VKGR--LLD-R---KSMGEDLFWAIRGGGGASFGVIVAWKVEL----------VTIP-STVTVCSSRRSLKR 241 (518)
Q Consensus 181 ~~~vV~--~~G~--i~~-~---~~~~~dl~~a~rg~~~g~~Givt~~~~~l----------~~~~-~~~~~~~~~~~~~~ 241 (518)
++|||+ +||+ +++ + +.+++|||||+||||+|+|||||+++||+ +|.+ ..+..+.+.|+..+
T Consensus 158 ~~evV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~~~~ 237 (501)
T 3pop_A 158 AVEVAVVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFPWAM 237 (501)
T ss_dssp EEEEEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEEGGG
T ss_pred EEEEEEecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEchhh
Confidence 999999 8899 444 2 35689999999998778999999999999 6654 35666677776432
Q ss_pred ----hHHHHHHHHHHhhh--ccCCCc--eEEEEEeccccCCCCCceEEEEEEEEEeCCccCchhhhhhhcCc------CC
Q 042207 242 ----NLTRLVHRWQFVAD--KFDEDL--ITGVFLSSVNASTGGNRTVIASFESVFLGGVDGVIPLMQKSFPE------LG 307 (518)
Q Consensus 242 ----~~~~~~~~~~~~~~--~~~~~l--~~~~~~~~~~~~~~g~~~~~i~~~~~~~G~~~~~~~~l~~~~~~------l~ 307 (518)
.+.++++.|+++.. ..|+++ .....+...+. ... .+.+..+|.|+.+++++++++++.. +.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~g~~~~~~~~l~~~~~~~~~~~g~~ 312 (501)
T 3pop_A 238 IDETSFVTVMRRFFEWHERHSEPGSPESSLFATFFVNHV---SSG--VLQLMVQQDADVDPEGEILARFVASLTEGTGVV 312 (501)
T ss_dssp CCHHHHHHHHHHHHHHHHHSCCTTCGGGGEEEEEEEECG---GGC--EEEEEEEEETTTCTTCHHHHHHHHHHHTTSSCC
T ss_pred cCHHHHHHHHHHHHHHHhhccCCCccccceEEEEEecCC---CCC--eEEEEEEEeCChHHHHHHHHHHHHhhhhccCCC
Confidence 24567777877764 355543 22222222211 011 3456677889887776666664332 22
Q ss_pred CccccceeccHHHHHHhhhcCCCCcchhhhccCCCcccccceecccCccCCCCHHHHHHHHHHHhhC-CCCceEEEEEec
Q 042207 308 LVEKECTETSWVRAVLHHARFPIEASLDVLLNRSPVTKRFYKAKSDYVREPMPEIAFEGIFELFNEK-EGGNAEIMLVPY 386 (518)
Q Consensus 308 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~l~~~~~~~-~~~~s~i~~~~~ 386 (518)
+... +.+++|.+...+.. ...+.+ ....+++.++.++.++++++.++.+++.+.+. +.+.+.++++++
T Consensus 313 p~~~-~~~~~~~~~~~~~~-~~~~~~---------~~~~~~~~ks~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 381 (501)
T 3pop_A 313 GIPR-GGVMSWLTGTRYMS-QADCGD---------VMGARSASKSAYHRAAPTDEQLSVLHRHLHADHPGQASYVMFNSY 381 (501)
T ss_dssp CEEE-EEEEEHHHHHHHTC-BCSCGG---------GTTCEEEEEEEEESSCCCHHHHHHHHHHHTSSSCCTTEEEEEEEC
T ss_pred ccce-eEEeCHHHHHhhhc-CCCCCc---------ccccccceecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEEec
Confidence 3333 77899998765532 111000 01235677888888789999999999988753 334578999999
Q ss_pred CCccCCCCCCCCCcccccCCeeEEEEEEEeCCCCchhHHHHHHHHHHHHhhhcccccC------CCCccccCCCCccccc
Q 042207 387 GGKMSEIPESAIPFPHRAGNIYKMSPVVYWYEEGSETAERHINWIRKLHSFLTPFVSK------NPRASYINYRDIDIGA 460 (518)
Q Consensus 387 GGav~~v~~~~tAf~~Rd~~~~~~~~~~~W~d~~~~~~~~~~~wi~~~~~~l~p~~~~------~~~~~Y~Ny~d~~~~~ 460 (518)
||+++++++++|||+||+ ..|++++.+.|.++ +.++++.+|++++++.+.+.... .+.++|+||+|.+++.
T Consensus 382 GGav~~v~~~~TAf~hR~-~~~~~~~~~~w~~~--~~~~~~~~w~~~~~~~~~~~~~g~p~~~~~~~gaYvNy~d~dl~~ 458 (501)
T 3pop_A 382 GGEINRRGPSDAAVPQRD-SVVKSSWFSAWQDA--ELDELHLGWLRGLYEEFFAGTGGVPVTGGRTDGCYINYPDADLLD 458 (501)
T ss_dssp CGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCG--GGHHHHHHHHHHHHHHHTGGGTTSCCTTSSBCCCCTTSCCGGGGC
T ss_pred CcccccCCCCCCCccCcC-ccEEEEEEEEeCCc--chHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCceeccCCCccccc
Confidence 999999999999999999 68999999999865 56678999999999999766421 2468999999998752
Q ss_pred cccCCcccccccchhhhhhhcccHHHHHHHHhhcCCCCCCcCCCCCCC
Q 042207 461 NKIRGYTSYKQASIWGRKYFRNNFDRLVVVKTMVDPHNFFRNEQSIPS 508 (518)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~y~G~n~~RL~~IK~kYDP~~vF~~~~~i~~ 508 (518)
.+. .. .+..|++.|||+||+||++||+||||+|+|+++|||||
T Consensus 459 ~~~--~~---~~~~w~~~Yyg~N~~RL~~vK~kyDP~n~F~~~qsI~p 501 (501)
T 3pop_A 459 PAR--NR---SGEPWHHLYYKDNYARLRSAKRAWDPLNTFHHSMSIGL 501 (501)
T ss_dssp TTT--CC---SSCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred ccc--cc---ccchHHHHHhHhHHHHHHHHHHHhCcccccCCCCCCCC
Confidence 110 00 12249999999999999999999999999999999997
No 6
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=1.5e-69 Score=579.33 Aligned_cols=472 Identities=24% Similarity=0.391 Sum_probs=343.9
Q ss_pred hhhHHHHhccCCCCCCCcccceEecCCCCchhhHHhhcccccccccCCCCCCcEEEecCCHHHHHHHHHHHHHcCCeEEE
Q 042207 5 QENFLQCLLQNSDNSTTSISKVIYTQNNSSYSSILDFTIQNRRFLTAATPKPQVIVKPLQVSHIQSVIFCSQWHGMQVRV 84 (518)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~~~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~ 84 (518)
.-|+++|-.-..++...+....|++|+|+.|+++++. +|.|| ...|.+||+|++++||+++|++|+++++||++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~Y~~~~~~--~n~~~----~~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v 87 (530)
T 2y3s_A 14 DYDIPTTENLYFQGSEFMKHIDSVAPGDIRYEDLRRG--ENLRF----VGDPEEIHLVGSAAEIEQVLSRAVRSGKRVAV 87 (530)
T ss_dssp --------------------CCEECTTSTTHHHHTCC--SCTTC----CCCCSEEEECCSHHHHHHHHHHHHHTTCCEEE
T ss_pred cccchhHHHHHhhhhhccCCceEECCCCccHHHHHhH--hhhhc----cCCCCEEEecCCHHHHHHHHHHHHHcCCcEEE
Confidence 3478888776655544455668999999999998753 24444 57899999999999999999999999999999
Q ss_pred EeCCCCCCCCCcccCCCeEEEEccCCcceEEeCCCcEEEEeCCCcHHHHHHHHHh-hCCCceecCCCCCCccchhhhcCC
Q 042207 85 RSGGHDYEGLSYISHVPYVVIDLINLRSISIDVEKTTAWIQAGATIGELYHKIAD-TSGTLGFPAGVCPSVGVGGHFSGG 163 (518)
Q Consensus 85 ~g~Gh~~~g~~~~~~~~~vvidl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~-~g~~l~~~~g~~~~vgigG~~~gg 163 (518)
|||||++.+.+.... ++++|||++|++|++|++.++|+||||+++.+|+++|.+ +| +.++.|.|++|||||+++||
T Consensus 88 ~ggGh~~~g~~~~~~-~gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gG 164 (530)
T 2y3s_A 88 RSGGHCYEDFVANSD-VRVVMDMSRLSAVGFDEERGAFAVEAGATLGAVYKTLFRVWG--VTLPGGACPDVGAGGHILGG 164 (530)
T ss_dssp ESSCCCSSSTTTCTT-CCEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHHS--CCCCCCSCTTCBHHHHHHTT
T ss_pred ECCCCCCCCCcccCC-CeEEEEcccCCCEEEcCCCCEEEEeCCCCHHHHHHHHHhhcC--eEEeCCCCCCCCcCCCcCCC
Confidence 999999988665432 389999999999999999999999999999999999985 77 57788999999999999999
Q ss_pred CCCCccccCCccccceeEEEEEeeC--CeEEe---ccC-CCc--hhHHHhhccCCCCeEEEEEEEEEE------------
Q 042207 164 GYGILLRKYGLAADHVVDAHLVDVK--GRLLD---RKS-MGE--DLFWAIRGGGGASFGVIVAWKVEL------------ 223 (518)
Q Consensus 164 g~g~~~~~~G~~~d~v~~~~vV~~~--G~i~~---~~~-~~~--dl~~a~rg~~~g~~Givt~~~~~l------------ 223 (518)
|+|+++++||+++|+|+++|||++| |+++. +.+ +++ |||||+||||+|+|||||+++||+
T Consensus 165 g~g~~s~~~G~~~D~v~~~evV~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~ 244 (530)
T 2y3s_A 165 GYGPLSRMHGSIVDYLHAVEVVVVDASGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRL 244 (530)
T ss_dssp CCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGS
T ss_pred CCCcccccccchhhheeeEEEEEecCCCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccc
Confidence 9999999999999999999999954 99743 332 455 599999998778999999999999
Q ss_pred EecCC-eeEEEEEeechh----hhHHHHHHHHHHhhhc--cCCCc--eEEEEEeccccCCCCCceEEEEEEEEEeCCccC
Q 042207 224 VTIPS-TVTVCSSRRSLK----RNLTRLVHRWQFVADK--FDEDL--ITGVFLSSVNASTGGNRTVIASFESVFLGGVDG 294 (518)
Q Consensus 224 ~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~l--~~~~~~~~~~~~~~g~~~~~i~~~~~~~G~~~~ 294 (518)
+|.|+ .+..+.+.|+.+ +.+.++++.|+++... .|++. .....+...+. ... .+.+..+|.|+.++
T Consensus 245 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~g~~~~ 319 (530)
T 2y3s_A 245 LPRPPAEVLLNTTVWPWEGLDEAAFARLVRNHGRWFEQNSGPDSPWCDLYSVLALTRS---QSG--ALAMTTQLDATGPD 319 (530)
T ss_dssp SCCCCSEEEEEEEEEESTTCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECG---GGS--EEEEEEEEECCSTT
T ss_pred cCCCCceEEEEEEEecccccCHHHHHHHHHHHHHHhhhcCCCCcccceeEEEEEeccC---CCC--cEEEEEEEeCCHHH
Confidence 99876 455566666542 2245677778777643 45542 12222222211 112 34455678898877
Q ss_pred chhhhhhhcC---c-CC-CccccceeccHHHHHHhhhcCCCCcchhhhccCCCcccccceecccCccCCCCHHHHHHHHH
Q 042207 295 VIPLMQKSFP---E-LG-LVEKECTETSWVRAVLHHARFPIEASLDVLLNRSPVTKRFYKAKSDYVREPMPEIAFEGIFE 369 (518)
Q Consensus 295 ~~~~l~~~~~---~-l~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~l~~ 369 (518)
..+++++++. . ++ +....+..++|.+......... . ... ..+++.++.++.+.++++.++.+++
T Consensus 320 ~~~~l~p~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~-~~r~~~~s~~~~~~~~~~~i~~~~~ 388 (530)
T 2y3s_A 320 AEKRLETYLAAVSEGVGVQPHSDTRRLPWLHSTRWPGIAG---------D-GDM-TGRAKIKAAYARRSFDDRQIGTLYT 388 (530)
T ss_dssp HHHHHHHHHHHHHTTCSSCCEEEEEEEEHHHHTTCHHHHC---------C-CCC-CSEEEEEEEEESSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCccceeeeccHHHHHHhhcCCC---------C-Ccc-cccceeeccccccCCCHHHHHHHHH
Confidence 7666665322 1 33 2334556778877443221100 0 000 1245567777776799999999999
Q ss_pred HHhhCC--CCceEEEEEecCCccCCCCCCCCCcccccCCeeEEEEEEEeCCCCchhHHHHHHHHHHHHhhhcccccC---
Q 042207 370 LFNEKE--GGNAEIMLVPYGGKMSEIPESAIPFPHRAGNIYKMSPVVYWYEEGSETAERHINWIRKLHSFLTPFVSK--- 444 (518)
Q Consensus 370 ~~~~~~--~~~s~i~~~~~GGav~~v~~~~tAf~~Rd~~~~~~~~~~~W~d~~~~~~~~~~~wi~~~~~~l~p~~~~--- 444 (518)
.+.+.+ ...+.+.++++||++++++.++++|+||+ ..|++++.+.|.++ +.++.+.+|++++++.+.+...+
T Consensus 389 ~~~~~~~~~~~~~~~~~~~GGav~~~~~~~ta~~~R~-~~~~~~~~~~w~~~--~~~~~~~~w~~~~~~~l~~~~~g~p~ 465 (530)
T 2y3s_A 389 RLTSTDYDNPAGVVALIAYGGKVNAVPADRTAVAQRD-SILKIVYVTTWEDP--AQDPVHVRWIRELYRDVYADTGGVPV 465 (530)
T ss_dssp HHHCSSSCCTTCEEEEEECCGGGGGSCTTSSSCCCCS-CSEEEEEEEEECCT--TCHHHHHHHHHHHHHHHTGGGTTSCC
T ss_pred HHHhcCCCCCceEEEEEecCCccccCCCCcCcccccc-cceeEEEEEecCCC--cchHHHHHHHHHHHHHHHhhhcCCCc
Confidence 887532 23467889999999999999999999999 68999999999876 45578899999999988733211
Q ss_pred ---CCCccccCCCCccccccccCCcccccccchhhhhhhcccHHHHHHHHhhcCCCCCCcCCCCCCCc
Q 042207 445 ---NPRASYINYRDIDIGANKIRGYTSYKQASIWGRKYFRNNFDRLVVVKTMVDPHNFFRNEQSIPSL 509 (518)
Q Consensus 445 ---~~~~~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~~y~G~n~~RL~~IK~kYDP~~vF~~~~~i~~~ 509 (518)
...++|+||+|.+++..+ -..|+ ..|++.|||+||+||++||+||||+|||+++|+|+|+
T Consensus 466 ~~~~~~g~Y~Ny~d~~~~~~~--~~~s~---~~~~~~yyg~n~~RL~~iK~kyDP~nvF~~~q~I~p~ 528 (530)
T 2y3s_A 466 PGGAADGAYVNYPDVDLADEE--WNTSG---VPWSELYYKDAYPRLQAVKARWDPRNVFRHALSVRVP 528 (530)
T ss_dssp TTTTBCCCCTTSCCGGGGCTT--TCCSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred ccCCCCceEeCCcCccccccc--cccch---hHHHHHHHHHHHHHHHHHHHHhCchhhcCCCCCCCCC
Confidence 124799999998864200 00011 1399999999999999999999999999999999986
No 7
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=9.4e-69 Score=572.97 Aligned_cols=459 Identities=26% Similarity=0.441 Sum_probs=344.6
Q ss_pred hhHHHHhccCCCCCCCcccceEecCCCCchhhHH-hhcccccccccCCCCCCcEEEecCCHHHHHHHHHHHHHcCCeEEE
Q 042207 6 ENFLQCLLQNSDNSTTSISKVIYTQNNSSYSSIL-DFTIQNRRFLTAATPKPQVIVKPLQVSHIQSVIFCSQWHGMQVRV 84 (518)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~v~~p~~~~y~~~~-~~~~~n~~~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~ 84 (518)
.|-..|++. ....|++|+|+.|++++ +. +|.|| ...|.+||+|++++||+++|++|+++++||.+
T Consensus 19 ~~~~~~~~~--------~~~~v~~p~d~~Y~~~~~~~--~n~~~----~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v 84 (521)
T 2ipi_A 19 FDGGACGAR--------TALVKVDRVDRRYQDLVTRG--FNGRF----RGRPDVVYVVHTADQVVDAVNQAMAAGQRIAV 84 (521)
T ss_dssp ------------------CCCEEESSSTTHHHHHTCC--SCTTC----CCCCSEEEECSSHHHHHHHHHHHHHHTCCEEE
T ss_pred ccccccccC--------CCCeEECCCCcchHHHHhcc--ccccc----cCCCCEEEEcCCHHHHHHHHHHHHHcCCeEEE
Confidence 455677773 24689999999999987 43 35555 57899999999999999999999999999999
Q ss_pred EeCCCCCCCCCcccCCCeEEEEccCCcceEEeCCCcEEEEeCCCcHHHHHHHHH-hhCCCceecCCCCCCccchhhhcCC
Q 042207 85 RSGGHDYEGLSYISHVPYVVIDLINLRSISIDVEKTTAWIQAGATIGELYHKIA-DTSGTLGFPAGVCPSVGVGGHFSGG 163 (518)
Q Consensus 85 ~g~Gh~~~g~~~~~~~~~vvidl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~-~~g~~l~~~~g~~~~vgigG~~~gg 163 (518)
|||||++.+.+.... ++|+|||++||+|++|++.++|+||||+++++|+++|. ++| +.+++|.|+++||||+++||
T Consensus 85 rggGh~~~g~~~~~~-~gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gG 161 (521)
T 2ipi_A 85 RSGGHCFEGFVDDPA-VRAVIDMSQMRQVFYDSGKRAFAVEPGATLGETYRALYLDWG--VTIPAGVCPQVGVGGHVLGG 161 (521)
T ss_dssp ESSCCCTTCGGGCTT-CCEEEECTTCCCEEEETTTTEEEECTTSBHHHHHHHHHHHHS--BCCCCCSCTTCBHHHHTTTT
T ss_pred ECCCcCCCCCcccCC-CeEEEecccCCCeEEeCCCCEEEEeCCcCHHHHHHHHHHhcC--ceeCCCCCCCcccCCcccCC
Confidence 999999988765432 38999999999999999999999999999999999997 677 67788999999999999999
Q ss_pred CCCCccccCCccccceeEEEEEeeC--CeEEe---ccC-CCc--hhHHHhhccCCCCeEEEEEEEEEE-----------E
Q 042207 164 GYGILLRKYGLAADHVVDAHLVDVK--GRLLD---RKS-MGE--DLFWAIRGGGGASFGVIVAWKVEL-----------V 224 (518)
Q Consensus 164 g~g~~~~~~G~~~d~v~~~~vV~~~--G~i~~---~~~-~~~--dl~~a~rg~~~g~~Givt~~~~~l-----------~ 224 (518)
|+|+++++||+++|+|+++|||++| |+++. +.. +++ |||||+||||+|+|||||+++||+ +
T Consensus 162 g~g~~s~~~G~~~D~v~~~evV~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~ 241 (521)
T 2ipi_A 162 GYGPLSRRDGVVADHLYAVEVVVVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLL 241 (521)
T ss_dssp CCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSS
T ss_pred CCCccccccccHhhcEEEEEEEEecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCccccc
Confidence 9999999999999999999999987 98743 322 445 599999998678999999999999 9
Q ss_pred ecCC-eeEEEEEeechh----hhHHHHHHHHHHhhhc--cCCC----ceEEEEEeccccCCCCCceEEEEEEEEEeCCcc
Q 042207 225 TIPS-TVTVCSSRRSLK----RNLTRLVHRWQFVADK--FDED----LITGVFLSSVNASTGGNRTVIASFESVFLGGVD 293 (518)
Q Consensus 225 ~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~----l~~~~~~~~~~~~~~g~~~~~i~~~~~~~G~~~ 293 (518)
|.|+ .+..+.+.|+.+ +.+.++++.|+++... .|++ +...+.+... ... .+.+..+|.|+.+
T Consensus 242 p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~l~~~~~~~~~-----~~~--~~~~~~~~~g~~~ 314 (521)
T 2ipi_A 242 PKAPTSTLRHIVTWDWSALTEEAFTRIIDNHGAWHQSNSAAGTPYASMHSVFYLNSR-----AAG--QILLDIQIDGGLD 314 (521)
T ss_dssp CBCCSCEEEEEEEEESTTCCHHHHHHHHHHHHHHHHHSCSSSSGGGGCEEEEEEECT-----TSC--EEEEEEEEETTST
T ss_pred CCCCceEEEEEEEecccccCHHHHHHHHHHHHHHHHhccCCCccccceEEEEEeccC-----CCC--ceEEEEEeccCHH
Confidence 9876 345556666542 2235778888777643 4554 3333333211 112 2445567889887
Q ss_pred CchhhhhhhcCc----CC-CccccceeccHHHHHHhhhcCCCCcchhhhccCCCcccccceecccCccCCCCHHHHHHHH
Q 042207 294 GVIPLMQKSFPE----LG-LVEKECTETSWVRAVLHHARFPIEASLDVLLNRSPVTKRFYKAKSDYVREPMPEIAFEGIF 368 (518)
Q Consensus 294 ~~~~~l~~~~~~----l~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~l~ 368 (518)
+..+++++++.. ++ +....+..++|.+........ .....+++.++.++.+.++++.++.++
T Consensus 315 ~~~~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~s~~~~~~~~~~~i~~~~ 381 (521)
T 2ipi_A 315 GAEALLNDFVAAVNEGTGVEPAVQRSTEPWLRATLANKFD-------------TGGFDRTKSKGAYLRKPWTAAQAATLY 381 (521)
T ss_dssp THHHHHHHHHHHHTTTCSSCCEEEEEEECHHHHHTCCCCC-------------CTTCCEEEEEEEEESSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCccceeeecCHHHHHHhhcCC-------------CCCCccceeeccccccCCCHHHHHHHH
Confidence 766666553221 23 223445667888754322110 000023455666776678999999999
Q ss_pred HHHhhCCCCceEEEEEecCCccCCCCCCCCCcccccCCeeEEEEEEEeCCCCchhHHHHHHHHHHHHhhhcccccC----
Q 042207 369 ELFNEKEGGNAEIMLVPYGGKMSEIPESAIPFPHRAGNIYKMSPVVYWYEEGSETAERHINWIRKLHSFLTPFVSK---- 444 (518)
Q Consensus 369 ~~~~~~~~~~s~i~~~~~GGav~~v~~~~tAf~~Rd~~~~~~~~~~~W~d~~~~~~~~~~~wi~~~~~~l~p~~~~---- 444 (518)
+.+.+.+...+.+.++++||++++++.++++|+||+ .++++++.+.|.++ +.++.+.+|++++++.+.+...+
T Consensus 382 ~~~~~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~--~~~~~~~~~~~~~~~~~~~~~~g~p~~ 458 (521)
T 2ipi_A 382 RHLSADSQVWGEVSLYSYGGKVNSVPETATATAQRD-SIIKVWMSATWMDP--AHDDANLAWIREIYREIFATTGGVPVP 458 (521)
T ss_dssp HHHHSCCSSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCG--GGHHHHHHHHHHHHHHHTTTTTSSCCS
T ss_pred HHHHhCCCCceEEEEEecCCcccCCCCccccccccc-hhhhcceeEecCCC--CchHHHHHHHHHHHHHHHhhhcCCCcc
Confidence 988765444578899999999999999999999999 68899999999875 45678899999999998732211
Q ss_pred --CCCccccCCCCccccccccCCcccccccchhhhhhhcccHHHHHHHHhhcCCCCCCcCCCCCCCc
Q 042207 445 --NPRASYINYRDIDIGANKIRGYTSYKQASIWGRKYFRNNFDRLVVVKTMVDPHNFFRNEQSIPSL 509 (518)
Q Consensus 445 --~~~~~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~~y~G~n~~RL~~IK~kYDP~~vF~~~~~i~~~ 509 (518)
...++|+||+|.+++... ...+ ...|++.|||+||+||++||+||||+|||+++|+|+|+
T Consensus 459 ~~~~~g~Y~Ny~d~~~~~~~--~~~~---~~~~~~~y~g~n~~RL~~iK~kyDP~~vF~~~qsI~p~ 520 (521)
T 2ipi_A 459 DDRTEGTFINYPDVDLVDER--WNTS---GVPWYTLYYKGNYPRLQKVKARWDPRDVFRHALSVRPP 520 (521)
T ss_dssp SSSBCCCCTTSCCGGGGCTT--TSCC---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred cCCCCceEeCCCCccccccc--cccc---hhhHHHhhhhhHHHHHHHHHHHhCCcCEecCCCCCCCC
Confidence 124799999998864100 0000 01389999999999999999999999999999999985
No 8
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=3.4e-69 Score=576.18 Aligned_cols=456 Identities=25% Similarity=0.412 Sum_probs=345.1
Q ss_pred HHHhccCCCCCCCcccceEecCCCCchhhHH-hhcccccccccCCCCCCcEEEecCCHHHHHHHHHHHHHcCCeEEEEeC
Q 042207 9 LQCLLQNSDNSTTSISKVIYTQNNSSYSSIL-DFTIQNRRFLTAATPKPQVIVKPLQVSHIQSVIFCSQWHGMQVRVRSG 87 (518)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~v~~p~~~~y~~~~-~~~~~n~~~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~ 87 (518)
.+||.. ..+.|++|+|+.|++++ +. +|.|| ...|.+||+|++++||+++|++|+++++||.+|||
T Consensus 24 ~~~l~~--------~~~~v~~p~d~~Y~~~~~~~--~n~~~----~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~gg 89 (523)
T 2wdx_A 24 ERCLPP--------AGPVKVTPDDPRYLNLKLRG--ANSRF----NGEPDYIHLVGSTQQVADAVEETVRTGKRVAVRSG 89 (523)
T ss_dssp --CCCC--------CCCEEECTTSTTHHHHHTCS--SCTTC----CCCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESS
T ss_pred hhhccc--------CCCeEECCCCcchHHHHhhh--hhhcc----cCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcC
Confidence 378773 34799999999999987 43 36666 57899999999999999999999999999999999
Q ss_pred CCCCCCCCcccCCCeEEEEccCCcceEEeCCCcEEEEeCCCcHHHHHHHHHh-hCCCceecCCCCCCccchhhhcCCCCC
Q 042207 88 GHDYEGLSYISHVPYVVIDLINLRSISIDVEKTTAWIQAGATIGELYHKIAD-TSGTLGFPAGVCPSVGVGGHFSGGGYG 166 (518)
Q Consensus 88 Gh~~~g~~~~~~~~~vvidl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~-~g~~l~~~~g~~~~vgigG~~~ggg~g 166 (518)
||++.+.+.... ++++|||++||+|++|++.++|+||||+++.+|+++|.+ +| +.++.|.|++|||||+++|||+|
T Consensus 90 Gh~~~g~~~~~~-~gvvIdl~~m~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g 166 (523)
T 2wdx_A 90 GHCFEDFVDNPD-VKVIIDMSLLTEIAYDPSMNAFLIEPGNTLSEVYEKLYLGWN--VTIPGGVCGGVGVGGHICGGGYG 166 (523)
T ss_dssp CCCSSSSSSSTT-CCEEEECTTCCCEEEETTTTEEEECTTCBHHHHHHHHHHHHS--CCCCCCCCTTCBHHHHHHHTCCC
T ss_pred CCCCCCCccCCC-CeEEEEcccCCCEEEcCCCCEEEEcCCCCHHHHHHHHHHhcC--eEEccCCCCCCeeCccccCCCCC
Confidence 999988776532 389999999999999999999999999999999999984 77 56788999999999999999999
Q ss_pred CccccCCccccceeEEEEEeeC--CeEEe---ccC-CCch--hHHHhhccCCCCeEEEEEEEEEE-----------EecC
Q 042207 167 ILLRKYGLAADHVVDAHLVDVK--GRLLD---RKS-MGED--LFWAIRGGGGASFGVIVAWKVEL-----------VTIP 227 (518)
Q Consensus 167 ~~~~~~G~~~d~v~~~~vV~~~--G~i~~---~~~-~~~d--l~~a~rg~~~g~~Givt~~~~~l-----------~~~~ 227 (518)
+++++||+++|+|+++|||++| |++++ +.. +++| ||||+|||++|+|||||+++||+ +|.|
T Consensus 167 ~~s~~~G~~~D~v~~~evV~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~ 246 (523)
T 2wdx_A 167 PLSRQFGSVVDYLYAVEVVVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKP 246 (523)
T ss_dssp TTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCC
T ss_pred cccccccChhheEEEEEEEEecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCC
Confidence 9999999999999999999965 99753 332 4555 99999987678999999999999 9987
Q ss_pred C-eeEEEEEeechh----hhHHHHHHHHHHhhhc--cCCC----ceEEEEEeccccCCCCCceEEEEEEEEEeCCccCch
Q 042207 228 S-TVTVCSSRRSLK----RNLTRLVHRWQFVADK--FDED----LITGVFLSSVNASTGGNRTVIASFESVFLGGVDGVI 296 (518)
Q Consensus 228 ~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~----l~~~~~~~~~~~~~~g~~~~~i~~~~~~~G~~~~~~ 296 (518)
+ .+..+.+.|+.+ +.+.++++.|+++... .|++ +...+.+... ..+...+.+.+..+|.|+.++..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~g~~~~~~ 323 (523)
T 2wdx_A 247 PATLLTSTVTFDWAGMTEAAFSRLLRNHGEWYERNSGPDSPYTGLWSQLMIGNE---VPGMGESGFMMPIQVDATRPDAR 323 (523)
T ss_dssp CSEEEEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECC---CTTCTTCSEEEEEEEETTSTTHH
T ss_pred cccEEEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCccccceEEEEEeccC---CCCCcceeEEEEEEEeCCHHHHH
Confidence 6 355667777643 2245678888877643 5655 2333222211 11211123556678899887776
Q ss_pred hhhhhhcCc----CC-CccccceeccHHHHHHhhhcCCCCcchhhhccCCCcccccceecccCccCCCCHHHHHHHHHHH
Q 042207 297 PLMQKSFPE----LG-LVEKECTETSWVRAVLHHARFPIEASLDVLLNRSPVTKRFYKAKSDYVREPMPEIAFEGIFELF 371 (518)
Q Consensus 297 ~~l~~~~~~----l~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~l~~~~ 371 (518)
+++.+++.. ++ +....+..++|.+...... . . ..+++.++.++.+.++++.+..+++.+
T Consensus 324 ~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------~-~--~~~~~~~s~~~~~~~~~~~~~~~~~~~ 387 (523)
T 2wdx_A 324 RLLDAHIEAVIDGVPPAEVPEPIEQRWLASTPGRG-------------G-R--GPASKTKAGYLRKRLTDRQIQAVYENM 387 (523)
T ss_dssp HHHHHHHHHHHTTCTTCBCCCCEEEETTSSCCCCC-------------S-S--CCEEEEEEEEESSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCccccceeccHHHHHHhhc-------------C-C--CCceeeecccccCCCCHHHHHHHHHHH
Confidence 666653321 23 2223344556544211000 0 0 113455677776678999999999988
Q ss_pred hhC-CCCceEEEEEecCCccCCCCCCCCCcccccCCeeEEEEEEEeCCCCchhHHHHHHHHHHHHhhhcccccC------
Q 042207 372 NEK-EGGNAEIMLVPYGGKMSEIPESAIPFPHRAGNIYKMSPVVYWYEEGSETAERHINWIRKLHSFLTPFVSK------ 444 (518)
Q Consensus 372 ~~~-~~~~s~i~~~~~GGav~~v~~~~tAf~~Rd~~~~~~~~~~~W~d~~~~~~~~~~~wi~~~~~~l~p~~~~------ 444 (518)
... ....+.+.++++||++++++.++++|+||+ ..|++++.+.|.++ +.++.+.+|++++++.+......
T Consensus 388 ~~~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~--~~~~~~~~~~~~~~~~l~~~~~g~p~~~~ 464 (523)
T 2wdx_A 388 THMDGIDYGAVWLIGYGGKVNTVDPAATALPQRD-AILKVNYITGWANP--GNEAKHLTWVRKLYADVYAETGGVPVPND 464 (523)
T ss_dssp TCCTTCSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESSG--GGHHHHHHHHHHHHHHHTGGGTTSCCSCS
T ss_pred HhcCCCCceEEEEEecCCccccCCCccccccccC-ceEEEEEEEEcCCC--ccHHHHHHHHHHHHHHHHhhhcCCCccCC
Confidence 653 224567889999999999999999999999 68999999999876 45678899999999988732111
Q ss_pred CCCccccCCCCccccccccCCcccccccchhhhhhhcccHHHHHHHHhhcCCCCCCcCCCCCCC
Q 042207 445 NPRASYINYRDIDIGANKIRGYTSYKQASIWGRKYFRNNFDRLVVVKTMVDPHNFFRNEQSIPS 508 (518)
Q Consensus 445 ~~~~~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~~y~G~n~~RL~~IK~kYDP~~vF~~~~~i~~ 508 (518)
...++|+||+|.+++..+ -..|+ ..|++.|||+||+||++||+||||+|||+++|+|+|
T Consensus 465 ~~~g~Y~Ny~d~~~~~~~--~~~s~---~~~~~~yyg~n~~RL~~iK~kyDP~~vF~~~qsI~p 523 (523)
T 2wdx_A 465 VSDGAYINYPDSDLADPG--LNTSG---VPWHDLYYKGNHPRLRKVKAAYDPRNHFHHALSIRP 523 (523)
T ss_dssp SBCCCCTTSCCGGGGCTT--TCCSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred CCCcceecCCcccccccc--cccch---hHHHHHHHHHHHHHHHHHHHHhCcHhhcCCCCCCCC
Confidence 124799999998864100 00011 138999999999999999999999999999999987
No 9
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=2.8e-69 Score=575.17 Aligned_cols=466 Identities=20% Similarity=0.363 Sum_probs=357.1
Q ss_pred chhhhHHHHhccCCCCCCCcccceEecCCCCchhhHHhhcccccccccCCCCCCcEEEecCCHHHHHHHHHHHHHcCCeE
Q 042207 3 DAQENFLQCLLQNSDNSTTSISKVIYTQNNSSYSSILDFTIQNRRFLTAATPKPQVIVKPLQVSHIQSVIFCSQWHGMQV 82 (518)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~~~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~ 82 (518)
..-+.|++||.+. ...++.|+++.|++.. .+|+......|.+||+|++++||+++|++|+++++||
T Consensus 4 ~~~~~l~~~l~~~--------~~~~~~~~~~~y~~~~------~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~ 69 (503)
T 1zr6_A 4 AEFNSINACLAAA--------DVEFHEEDSEGWDMDG------TAFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQI 69 (503)
T ss_dssp CTTCHHHHHHHHT--------TCEECCTTSHHHHHHT------SCSBGGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHhhCcC--------CceecCCCccchHHHh------hhhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeE
Confidence 3457899999843 1368999999999874 3687777789999999999999999999999999999
Q ss_pred EEEeCCCCCCCCCcccCCCeEEEEccCCcceEEeCCCcEEEEeCCCcHHHHHHHHHhhCCCceecCCCCCCccchhhhcC
Q 042207 83 RVRSGGHDYEGLSYISHVPYVVIDLINLRSISIDVEKTTAWIQAGATIGELYHKIADTSGTLGFPAGVCPSVGVGGHFSG 162 (518)
Q Consensus 83 ~~~g~Gh~~~g~~~~~~~~~vvidl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~g 162 (518)
.+||||||+.+.+.+..+++++|||++|++|++| ++++|+||||+++.+|+++|.+++ ++.++.|.|+++||||+++|
T Consensus 70 ~v~ggGh~~~~~~~~~~~~gvvIdl~~l~~i~~d-~~~~v~v~aG~~~~~l~~~l~~~~-gl~~~~G~~~~vgvgG~~~g 147 (503)
T 1zr6_A 70 SAKGGGHSYGSYGFGGEDGHLMLELDRMYRVSVD-DNNVATIQGGARLGYTALELLDQG-NRALSHGTCPAVGVGGHVLG 147 (503)
T ss_dssp EEESSCCCTTCTTTTSSSSCEEEECTTCCCEEEC-TTSCEEEETTCBHHHHHHHHHHTT-SEECCCCSCTTSBHHHHHHH
T ss_pred EEECCCcCCCCCcccCCCCcEEEECccCCCEEEC-CCCeEEEecCCCHHHHHHHHHHcC-CEEeCCCCCCcCchhhhhcC
Confidence 9999999998766541124899999999999999 888999999999999999997765 47788999999999999999
Q ss_pred CCCCCccccCCccccceeEEEEEeeCCeEEe-ccCCCchhHHHhhccCCCCeEEEEEEEEEEEecCCeeEEEEEeechh-
Q 042207 163 GGYGILLRKYGLAADHVVDAHLVDVKGRLLD-RKSMGEDLFWAIRGGGGASFGVIVAWKVELVTIPSTVTVCSSRRSLK- 240 (518)
Q Consensus 163 gg~g~~~~~~G~~~d~v~~~~vV~~~G~i~~-~~~~~~dl~~a~rg~~~g~~Givt~~~~~l~~~~~~~~~~~~~~~~~- 240 (518)
||+|+++++||+++|+|+++|||++||++++ +..+++||||++|||+ |+|||||+++||++|.|+....+.+.+.+.
T Consensus 148 Gg~g~~s~~~G~~~D~v~~~~vV~a~G~i~~~~~~~~~dL~~a~rG~~-g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~ 226 (503)
T 1zr6_A 148 GGYGFATHTHGLTLDWLIGATVVLADASIVHVSETENADLFWALRGGG-GGFAIVSEFEFNTFEAPEIITTYQVTTTWNR 226 (503)
T ss_dssp CCCSTTHHHHCCGGGGEEEEEEECTTSCEEEEBTTBSHHHHHHHTTCC-SSSCEEEEEEECCEECCSCEEEEEEEECCCH
T ss_pred CCCCcccccccChhheEEEEEEEecCCCEEEeCCCCCccHHHHHhccC-CCcEEEEEEEEEEEecCceeEEEEEEEeCCH
Confidence 9999999999999999999999999999998 7778999999999995 699999999999999998666666666543
Q ss_pred hhHHHHHHHHHHhhhc-cCCCceEEEEEeccccCCCCCceEEEEEEEEEeCCccCchhhhhhhcCcCCC--ccccceecc
Q 042207 241 RNLTRLVHRWQFVADK-FDEDLITGVFLSSVNASTGGNRTVIASFESVFLGGVDGVIPLMQKSFPELGL--VEKECTETS 317 (518)
Q Consensus 241 ~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~g~~~~~i~~~~~~~G~~~~~~~~l~~~~~~l~~--~~~~~~~~s 317 (518)
+.+.++++.|+++... +|++++..+.+... .+.+..+|+|+.+++.+++++++..++. ....+..++
T Consensus 227 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----------~~~~~~~~~g~~~~~~~~l~pl~~~~~~~~~~~~~~~~~ 296 (503)
T 1zr6_A 227 KQHVAGLKALQDWAQNTMPRELSMRLEINAN----------ALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVETD 296 (503)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTBCCEEEEETT----------EEEEEEEESSCHHHHHHHHHHHHHHTTSCEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHhhcCChhHEEEEEEeCC----------eEEEEEEEECCHHHHHHHHHHHHHhcCcCCCcCceeeCC
Confidence 3466788899988766 88888876665431 4666788999988877777765433443 233455677
Q ss_pred HHHHHHhhhcCCCCcchhhhccCCCcccccceecccCccCCCCHHHHHHHHHHHh-hCCC---CceEEEEEecCC---cc
Q 042207 318 WVRAVLHHARFPIEASLDVLLNRSPVTKRFYKAKSDYVREPMPEIAFEGIFELFN-EKEG---GNAEIMLVPYGG---KM 390 (518)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~l~~~~~-~~~~---~~s~i~~~~~GG---av 390 (518)
|.+.+..+.. +..... ........+++.++.++.+ ++++.++.+++.+. .... ..+.+.++++|| ++
T Consensus 297 ~~~~~~~~~~---~~~~~~--~~p~g~~~~~~~~s~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~av 370 (503)
T 1zr6_A 297 WYGQINTYLY---GADLNI--TYNYDVHEYFYANSLTAPR-LSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSAL 370 (503)
T ss_dssp HHHHHTTSCT---TCCSSC--SSCCCCCBCEEEEEEEESS-CCHHHHHHHHHHHHHSCCCCTTEEEEEEEEECCSTTCSG
T ss_pred HHHHHHHHcC---CCcccc--cCCCCccccceecccchhh-CCHHHHHHHHHHHHhhCCCCCCcceEEEEEEcCCchhhh
Confidence 8764432211 000000 0000112235566777765 89999999999887 5322 124578899999 89
Q ss_pred CCCCCCCCCcccccCCeeEEEEEEEe-----CCCCchhHHHHHHHHHHHHhhhcccccCCCCccccCCCCccccccccCC
Q 042207 391 SEIPESAIPFPHRAGNIYKMSPVVYW-----YEEGSETAERHINWIRKLHSFLTPFVSKNPRASYINYRDIDIGANKIRG 465 (518)
Q Consensus 391 ~~v~~~~tAf~~Rd~~~~~~~~~~~W-----~d~~~~~~~~~~~wi~~~~~~l~p~~~~~~~~~Y~Ny~d~~~~~~~~~~ 465 (518)
++++.++++|+||+ .+|++++...| .++ +.++...+|++++.+.+.........++|+||+|.+++
T Consensus 371 ~~~~~~~ta~~~R~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Nyad~~~~------ 441 (503)
T 1zr6_A 371 AAVSNDETAYAHRD-QLWLWQFYDSIYDYENNTS--PYPESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLT------ 441 (503)
T ss_dssp GGSCTTTSSCCCTT-CSEEEEEEEEETTTTTCCT--TTTTSCHHHHHHHHHHHHTTSCGGGCBCCGGGCCTTCC------
T ss_pred cCCCcccCCccccc-ceeEEEEEeeeccccCCCc--cchHHHHHHHHHHHHHHHhhCCCCCCceeccCCCcccc------
Confidence 99999999999999 67888876777 232 12234456666666555443210113789999998753
Q ss_pred cccccccchhhhhhhcccHHHHHHHHhhcCCCCCCcCCCCCCCccccccccC
Q 042207 466 YTSYKQASIWGRKYFRNNFDRLVVVKTMVDPHNFFRNEQSIPSLSSWRKQKD 517 (518)
Q Consensus 466 ~~~~~~~~~~~~~y~G~n~~RL~~IK~kYDP~~vF~~~~~i~~~~~~~~~~~ 517 (518)
...|++.|||+||+||++||+||||+|+|+++|+|+|. .|..+++
T Consensus 442 ------~~~~~~~~yG~n~~RL~~iK~kyDP~~vF~~~~~i~~~-~w~~~~~ 486 (503)
T 1zr6_A 442 ------KEEAQKLYWRGNLEKLQAIKAKYDPEDVFGNVVSVEPI-AYLEQKL 486 (503)
T ss_dssp ------HHHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCC-CC-----
T ss_pred ------cchHHHHHHHhHHHHHHHHHHHhCchhhcCCCCCCCch-hhhhhhc
Confidence 12689999999999999999999999999999999885 6866554
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=1.6e-66 Score=549.36 Aligned_cols=439 Identities=23% Similarity=0.317 Sum_probs=338.5
Q ss_pred cccceEecCCCCchhhHHhhcccccccccCCCCCCcEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCC
Q 042207 22 SISKVIYTQNNSSYSSILDFTIQNRRFLTAATPKPQVIVKPLQVSHIQSVIFCSQWHGMQVRVRSGGHDYEGLSYISHVP 101 (518)
Q Consensus 22 ~~~~~v~~p~~~~y~~~~~~~~~n~~~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~g~~~~~~~~ 101 (518)
++.+.|++|+|+.|++++. +|+......|.+|++|++++||+++|++|+++++|+.+||||||+.+.+...+
T Consensus 11 ~~~~~v~~p~~~~y~~~~~------~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~~~~-- 82 (459)
T 2bvf_A 11 SIQGEVIYPDDSGFDAIAN------IWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYATNDG-- 82 (459)
T ss_dssp CCSSEEECTTSTTHHHHHC------CSCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTCCSS--
T ss_pred cCCceEECCCCccHHHHHH------HhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCccccCC--
Confidence 3468999999999998753 58877788999999999999999999999999999999999999988775444
Q ss_pred eEEEEccCCcceEEeCCCcEEEEeCCCcHHHHHHHHHhhCCCceecCCCCCCccchhhhcCCCCCCccccCCccccceeE
Q 042207 102 YVVIDLINLRSISIDVEKTTAWIQAGATIGELYHKIADTSGTLGFPAGVCPSVGVGGHFSGGGYGILLRKYGLAADHVVD 181 (518)
Q Consensus 102 ~vvidl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~ 181 (518)
+++|||++|++|++|+++.+|+||||+++++|+++|.++| +.+++|.|+.+||||+++|||+|+++++||+++|+|++
T Consensus 83 gvvi~l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~G--l~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~ 160 (459)
T 2bvf_A 83 GIVLDLRLMNSIHIDTAGSRARIGGGVISGDLVKEAAKFG--LAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNILG 160 (459)
T ss_dssp SEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHTTT--EEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEE
T ss_pred eEEEECCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHcC--CEecCCCCCCcccceeecCCCCccccccccCHhHhEEE
Confidence 8999999999999999999999999999999999999977 67888999999999999999999999999999999999
Q ss_pred EEEEeeCCeEEe-ccCCCchhHHHhhccCCCCeEEEEEEEEEEEecCCeeEEEEEeechhhhHH--HHHHHHHHhhhccC
Q 042207 182 AHLVDVKGRLLD-RKSMGEDLFWAIRGGGGASFGVIVAWKVELVTIPSTVTVCSSRRSLKRNLT--RLVHRWQFVADKFD 258 (518)
Q Consensus 182 ~~vV~~~G~i~~-~~~~~~dl~~a~rg~~~g~~Givt~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 258 (518)
+|||++||++++ +..+++||||++||| +|+|||||+++||++|.|+......+.|+..+ +. ++++.|+++...+|
T Consensus 161 ~~vV~~~G~i~~~~~~~~~dLf~a~rg~-~g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 238 (459)
T 2bvf_A 161 ATLVTATGDVIYCSDDERPELFWAVRGA-GPNFGVVTEVEVQLYELPRKMLAGFITWAPSV-SELAGLLTSLLDALNEMA 238 (459)
T ss_dssp EEEECTTSCEEEEESSSSHHHHHHHHHH-GGGTCEEEEEEEEEEECCCCEEEEEEEECCCH-HHHHHHHHHHHHHHHHTT
T ss_pred EEEEcCCCeEEEeCCCCChhhHhHhhcc-CCccEEEEEEEEEEEECCCcEEEEEEEechHH-hhHHHHHHHHHHHHHhCc
Confidence 999999999998 777889999999998 48999999999999999766666666666533 44 77888888877778
Q ss_pred CCceEEEEEeccccCCCCCceEEEEEEEEEeCCccCchhhhhhhcCcCC-CccccceeccHHHHHHhhhcCCCCcchhhh
Q 042207 259 EDLITGVFLSSVNASTGGNRTVIASFESVFLGGVDGVIPLMQKSFPELG-LVEKECTETSWVRAVLHHARFPIEASLDVL 337 (518)
Q Consensus 259 ~~l~~~~~~~~~~~~~~g~~~~~i~~~~~~~G~~~~~~~~l~~~~~~l~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 337 (518)
+.+...+ .... ...+. ..+.+...|.|+.++..+.+.++ ..++ .....+..++|.+....... .+
T Consensus 239 ~~~~~~~-~~~~--~~~~~--~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------~~-- 304 (459)
T 2bvf_A 239 DHIYPSV-FVGV--DENRA--PSVTVCVGHLGGLDIAERDIARL-RGLGRTVSDSIAVRSYDEVVALNAE------VG-- 304 (459)
T ss_dssp TTCCCEE-EEEE--CTTCC--EEEEEEEECCSCHHHHHHHHHHH-HTTSCCSEECCEEECHHHHHHHHHH------HS--
T ss_pred Hhhcccc-ccCc--ccCCC--ceEEEEEEEeCCHHHHHHHHHHH-HHhCcchhcceeecCHHHHHhcccc------cc--
Confidence 7774333 1111 01122 24556678889877666666653 3443 23345667788774333110 00
Q ss_pred ccCCCccccccee-cccCccCCCCHHHHHHHHHHHhhCC-CCceEEEEEecCCccCCCCCCCCCcccccCCeeEEEEEEE
Q 042207 338 LNRSPVTKRFYKA-KSDYVREPMPEIAFEGIFELFNEKE-GGNAEIMLVPYGGKMSEIPESAIPFPHRAGNIYKMSPVVY 415 (518)
Q Consensus 338 ~~~~~~~~~~~~~-~s~~~~~~l~~~~i~~l~~~~~~~~-~~~s~i~~~~~GGav~~v~~~~tAf~~Rd~~~~~~~~~~~ 415 (518)
..+....++.. ++.++++.++++.++.+++.+.+.+ ... ...++.+||++.+ .+.+||+||+ ..| +.+...
T Consensus 305 --~~~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~gg~~~~--~~~ta~~~R~-~~~-~~~~~~ 377 (459)
T 2bvf_A 305 --SFEDGMSNLWIDREIAMPNARFAEAIAGNLDKFVSEPASGG-SVKLEIEGMPFGN--PKRTPARHRD-AMG-VLALAE 377 (459)
T ss_dssp --CCCCSCEEEEEEEEECSCHHHHHHHHHTTGGGCEEETTTTE-EEEEEEECCCCCC--TTCCSSCCCS-SCE-EEEEEE
T ss_pred --cCCCCCcceEeccccccCCCCCHHHHHHHHHHHhhCCCCCc-eeEEEEeCCccCC--CCCCCcccCC-cce-EEEEEE
Confidence 00111122222 4556653456666777666665543 320 2234444888776 5679999999 567 888899
Q ss_pred eCCCCchhHHHHHHHHHHHHhhhcccccCCCCccccCCCCccccccccCCcccccccchhhhhhhccc-HHHHHHHHhhc
Q 042207 416 WYEEGSETAERHINWIRKLHSFLTPFVSKNPRASYINYRDIDIGANKIRGYTSYKQASIWGRKYFRNN-FDRLVVVKTMV 494 (518)
Q Consensus 416 W~d~~~~~~~~~~~wi~~~~~~l~p~~~~~~~~~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~~y~G~n-~~RL~~IK~kY 494 (518)
|.++. ..++.+.+|++++.+.++|+......++|+||+|.+. ..|.+.|||+| |+||++||+||
T Consensus 378 w~~~~-~~~~~~~~~~~~~~~~l~~~~~~p~~g~Y~N~~d~~~--------------~~~~~~~yG~~n~~rL~~iK~ky 442 (459)
T 2bvf_A 378 WSGAA-PGSEKYPELARELDAALLRAGVTTSGFGLLNNNSEVT--------------AEMVAEVYKPEVYSRLAAVKREY 442 (459)
T ss_dssp ECTTS-TTTTHHHHHHHHHHHHHHHTTCEEEEECCGGGCSSCC--------------HHHHHHHHCHHHHHHHHHHHHHH
T ss_pred eCCCc-cchHHHHHHHHHHHHHhcccccCCCCCeeeCCCCCcc--------------hHHHHHHhCcchHHHHHHHHHHh
Confidence 98763 1345689999999999998842112478999999762 16889999986 99999999999
Q ss_pred CCCCCCcCCCCCCC
Q 042207 495 DPHNFFRNEQSIPS 508 (518)
Q Consensus 495 DP~~vF~~~~~i~~ 508 (518)
||+|+|+++|+|+|
T Consensus 443 DP~~vF~~~~~I~p 456 (459)
T 2bvf_A 443 DPENRFRHNYNIDP 456 (459)
T ss_dssp CTTCCCCSSSCCCC
T ss_pred CcccccCCCCCCCC
Confidence 99999999999998
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=1.6e-41 Score=364.61 Aligned_cols=224 Identities=14% Similarity=0.204 Sum_probs=178.7
Q ss_pred hhhhHHHHhccCCCCCCCcccceEecCCCCchhhHHhhcccccccccCCCCCCcEEEecCCHHHHHHHHHHHHH--c-CC
Q 042207 4 AQENFLQCLLQNSDNSTTSISKVIYTQNNSSYSSILDFTIQNRRFLTAATPKPQVIVKPLQVSHIQSVIFCSQW--H-GM 80 (518)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~~~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~--~-~~ 80 (518)
..++|.+||..... .+.|.+ ++..+..+ ...|+......|.+|++|+|++||+++|++|++ + ++
T Consensus 30 ~~~~~~~~l~~~~~------~~~v~~-~~~~~~~~------~~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~ 96 (534)
T 1w1o_A 30 RGRPWPASLAALAL------DGKLRT-DSNATAAA------STDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPY 96 (534)
T ss_dssp ----------CTTT------TTCEEC-SHHHHHHT------SCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCC
T ss_pred chHHHHHHHHhcCC------CceEec-CHHHHHHH------hccccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCc
Confidence 34577788876331 346665 33334333 235776677899999999999999999999998 6 99
Q ss_pred eEEEEeCCCCCCCCCcccCCCeEEEEccCCcce------EEeCCCcEEEEeCCCcHHHHHHHHHhhCCCceecC-CCCCC
Q 042207 81 QVRVRSGGHDYEGLSYISHVPYVVIDLINLRSI------SIDVEKTTAWIQAGATIGELYHKIADTSGTLGFPA-GVCPS 153 (518)
Q Consensus 81 ~~~~~g~Gh~~~g~~~~~~~~~vvidl~~~~~i------~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~-g~~~~ 153 (518)
|++++|||||+.|.+.+.+ +++|||++||+| ++|+++.+|+||||+++.+|++++.++| +..+. +....
T Consensus 97 ~v~~~G~G~~~~g~~~~~~--gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~G--l~~~~~~~~~~ 172 (534)
T 1w1o_A 97 TIAFRGRGHSLMGQAFAPG--GVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARG--VAPRSWTDYLY 172 (534)
T ss_dssp CEEEESSCCCSSSTTCCTT--SEEEEGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTT--EEESCCCSSCC
T ss_pred eEEEECCCCCCCCCcCCCC--eEEEECccccccccCccEEEcCCCCEEEECCCcCHHHHHHHHHHCC--CcccCCCCCCC
Confidence 9999999999998887765 999999999984 8898889999999999999999999988 44333 44467
Q ss_pred ccchhhhcCCCCCCccccCCccccceeEEEEEeeCCeEEe-ccCCCchhHHHhhccCCCCeEEEEEEEEEEEecCCeeEE
Q 042207 154 VGVGGHFSGGGYGILLRKYGLAADHVVDAHLVDVKGRLLD-RKSMGEDLFWAIRGGGGASFGVIVAWKVELVTIPSTVTV 232 (518)
Q Consensus 154 vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~i~~-~~~~~~dl~~a~rg~~~g~~Givt~~~~~l~~~~~~~~~ 232 (518)
++|||.+.+||+|.++.+||.++|+|+++|||++||++++ +..+++||||++||| +|+|||||+++|||+|.|+....
T Consensus 173 ~tvGG~v~~~g~g~~~~~yG~~~d~v~~~evV~~dG~v~~~~~~~~~dL~~~~rGs-~G~~GIVt~~~l~l~p~~~~~~~ 251 (534)
T 1w1o_A 173 LTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGG-LGQFGVITRARIAVEPAPARARW 251 (534)
T ss_dssp SBHHHHHTTCCCSTTHHHHCCGGGSEEEEEEEETTSCEEEEESSSSHHHHHHHTTC-TTCSEEEEEEEEEEEECCSEEEE
T ss_pred EEeceeccCCCccccccccccHhhhEEEEEEEeCCccEEEECCCCChhhHhhhcCC-CCCcEEEEEEEEEEEECCcceEE
Confidence 8999999999999999999999999999999999999998 667889999999999 57999999999999999987666
Q ss_pred EEEeechhhhHHH
Q 042207 233 CSSRRSLKRNLTR 245 (518)
Q Consensus 233 ~~~~~~~~~~~~~ 245 (518)
+.+.|.....+.+
T Consensus 252 ~~~~~~~~~~~~~ 264 (534)
T 1w1o_A 252 VRFVYTDFAAFSA 264 (534)
T ss_dssp EEEEESCHHHHHH
T ss_pred EEEEeCCHHHHHH
Confidence 6677754333333
No 12
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=3.2e-35 Score=314.18 Aligned_cols=200 Identities=19% Similarity=0.260 Sum_probs=169.7
Q ss_pred ccccCCCCCCcEEEecCCHHHHHHHHHHHHH-cCCeEEEEeCCCCCCCCCcccCCCeEEEEccCCcceEEeC-----CC-
Q 042207 47 RFLTAATPKPQVIVKPLQVSHIQSVIFCSQW-HGMQVRVRSGGHDYEGLSYISHVPYVVIDLINLRSISIDV-----EK- 119 (518)
Q Consensus 47 ~~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~-~~~~~~~~g~Gh~~~g~~~~~~~~~vvidl~~~~~i~~d~-----~~- 119 (518)
.|+......|.+|++|+|++||+++|++|++ +++||++||||||+.|.+.+.+ +|+|||++||+|++++ +.
T Consensus 53 d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~~~~~~--gvvidl~~m~~i~i~~~~~~~~~~ 130 (524)
T 2exr_A 53 DFGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQAMAEG--GLVVDMSTTAENHFEVGYLSGGDA 130 (524)
T ss_dssp CTTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSSTTCCTT--SEEEEGGGGTTSCEEEEECCSSSS
T ss_pred cccccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCcccCCC--EEEEECcCCCCcEEeecccCCCCC
Confidence 4766667889999999999999999999996 9999999999999998877654 8999999999987776 55
Q ss_pred -cEEEEeCCCcHHHHHHHHH-hhCCCceec-CCCCCCccchhhhcCCCCCCccccCCccccceeEEEEEeeCCeEEe-cc
Q 042207 120 -TTAWIQAGATIGELYHKIA-DTSGTLGFP-AGVCPSVGVGGHFSGGGYGILLRKYGLAADHVVDAHLVDVKGRLLD-RK 195 (518)
Q Consensus 120 -~~v~v~~G~~~~~l~~~l~-~~g~~l~~~-~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~i~~-~~ 195 (518)
.+|+||||+++.++++++. ++|. ..+ .+..+.++|||.+.++|.|..+.+||.++|+|++++||++||++++ ..
T Consensus 131 ~~~v~v~aGv~~~~l~~~~l~~~Gl--~~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~~~~~ 208 (524)
T 2exr_A 131 TAFVDVSGGALWEDVLKRCVSEYGL--APRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTCSE 208 (524)
T ss_dssp SEEEEEETTCBHHHHHHHHHHHHSE--ECSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEEEEES
T ss_pred ceEEEEeCCcCHHHHHHHHHHHcCC--CCCCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEEEECC
Confidence 7999999999999865544 8874 322 2445678999999999999999999999999999999999999998 66
Q ss_pred CCCchhHHHhhccCCCCeEEEEEEEEEEEecCCeeEEEEEeechhhhHHHHHHHHH
Q 042207 196 SMGEDLFWAIRGGGGASFGVIVAWKVELVTIPSTVTVCSSRRSLKRNLTRLVHRWQ 251 (518)
Q Consensus 196 ~~~~dl~~a~rg~~~g~~Givt~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (518)
..++||||+++|| +|+|||||+++|||+|.|+....+.+.|...+++.+.+..+.
T Consensus 209 ~~~~dL~~~~~Gs-~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~~~~~~~~l~ 263 (524)
T 2exr_A 209 IENSELFFSVLGG-LGQFGIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDAEWLV 263 (524)
T ss_dssp SSSHHHHHHHTTC-TTSSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHHHHH
T ss_pred CCChhHHhHhhcC-CCccEEEEEEEEEEEEcCCeeEEEEEEeCCHHHHHHHHHHHH
Confidence 6789999999999 689999999999999999977667777765444444444443
No 13
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=1.2e-35 Score=325.60 Aligned_cols=219 Identities=18% Similarity=0.187 Sum_probs=187.1
Q ss_pred ceEecCCCCchhhHHhhcccccccccCCCCCCcEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccC---CC
Q 042207 25 KVIYTQNNSSYSSILDFTIQNRRFLTAATPKPQVIVKPLQVSHIQSVIFCSQWHGMQVRVRSGGHDYEGLSYISH---VP 101 (518)
Q Consensus 25 ~~v~~p~~~~y~~~~~~~~~n~~~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~g~~~~~~---~~ 101 (518)
.++..-....|.+..+ .|++.....|.+||+|+|++||+++|++|+++++||++||||||+.|...+.. .+
T Consensus 181 ~r~~h~~g~s~~d~~~------~~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvprGgGTsl~GG~~~~~~~~~g 254 (658)
T 4bby_A 181 DRVFRAHGHCLHEIFL------LREGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRT 254 (658)
T ss_dssp HHHHTSCCSCHHHHHH------HHSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTCCCTTCCSC
T ss_pred HHhhhcCCCCHHHHHH------HhCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEEEECCCcCCCCCCCCCCCCCCc
Confidence 3455555555665543 36777788999999999999999999999999999999999999876555421 24
Q ss_pred eEEEEccCCcce-EEeCCCcEEEEeCCCcHHHHHHHHHhhCCCceecCCCCCCccchhhhcCCCCCCccccCCcccccee
Q 042207 102 YVVIDLINLRSI-SIDVEKTTAWIQAGATIGELYHKIADTSGTLGFPAGVCPSVGVGGHFSGGGYGILLRKYGLAADHVV 180 (518)
Q Consensus 102 ~vvidl~~~~~i-~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~ 180 (518)
+|+|||++||+| +||+++++++|||||++.+|.++|.++|+.+.+.+++....+|||++++|+.|+.+.+||.++|+|+
T Consensus 255 gVvLDlsrMnrIleiD~~~~~atVeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~rYG~~~d~Vl 334 (658)
T 4bby_A 255 IISLDTSQMNRILWVDENNLTAHVEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVV 334 (658)
T ss_dssp EEEEECTTCCCEEEEETTTTEEEEETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEE
T ss_pred EEEEECccCCCcEEEcCCCCEEEEecCchHHHHHHHHHHcCCccCCCCCCccccEEeehhhcCCCCCCccCcCCHHHhee
Confidence 799999999996 8999999999999999999999999999766666788888999999999999999999999999999
Q ss_pred EEEEEeeCCeEEe-----ccCCCchhHHHhhccCCCCeEEEEEEEEEEEecCCeeEEEEEeechhhhHHHHHHHH
Q 042207 181 DAHLVDVKGRLLD-----RKSMGEDLFWAIRGGGGASFGVIVAWKVELVTIPSTVTVCSSRRSLKRNLTRLVHRW 250 (518)
Q Consensus 181 ~~~vV~~~G~i~~-----~~~~~~dl~~a~rg~~~g~~Givt~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (518)
++|||++||++++ ....++||+|.++|+ +|+|||||+++|||+|.|+....+.+.|+..+++.+++..+
T Consensus 335 gleVVlpdG~i~~~~~~~k~~aGyDL~~L~iGS-EGTLGIITeatLrL~P~P~~~~~~~~~f~d~~~a~~av~~i 408 (658)
T 4bby_A 335 HMKVVTPRGVIEKSCQGPRMSTGPDIHHFIMGS-EGTLGVITEATIKIRPTPEYQKYGSVAFPNFEQGVACLREI 408 (658)
T ss_dssp EEEEEETTEEEECSCCCSSCCSSSCTHHHHTTC-TTSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHH
T ss_pred eEEEEeCCCcccccccccccCCCcCHHHHhccC-CCcCcceeeeeeeeccCCccccccccccCCchhhhhhHHHH
Confidence 9999999999986 234678999999999 78999999999999999998777778887555455555444
No 14
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=100.00 E-value=2.7e-33 Score=299.75 Aligned_cols=199 Identities=20% Similarity=0.265 Sum_probs=165.4
Q ss_pred CCCCCcEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCC-CCCcccCCCeEEEEccCCcce-EEeCCCcEEEEeCCCc
Q 042207 52 ATPKPQVIVKPLQVSHIQSVIFCSQWHGMQVRVRSGGHDYE-GLSYISHVPYVVIDLINLRSI-SIDVEKTTAWIQAGAT 129 (518)
Q Consensus 52 ~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~-g~~~~~~~~~vvidl~~~~~i-~~d~~~~~v~v~~G~~ 129 (518)
....|.+||+|+|++||+++|++|+++++||+++|+|||+. |.+.+...++|+|||++||+| ++|+++.+++||||++
T Consensus 53 ~~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aGv~ 132 (520)
T 1wvf_A 53 AAHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVT 132 (520)
T ss_dssp GGGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTSCSSTTCEEEECTTCCCEEEEETTTTEEEECTTCC
T ss_pred cCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCCCCCCCCeEEEECCCCCceEEECCCCCEEEECCCCC
Confidence 45689999999999999999999999999999999999986 665431124899999999998 9999999999999999
Q ss_pred HHHHHHHHHhhCCCceecCC---CCCCccchhhhcCCCCCCccccCCccccceeEEEEEeeCCeEEe-c--cCCCchhHH
Q 042207 130 IGELYHKIADTSGTLGFPAG---VCPSVGVGGHFSGGGYGILLRKYGLAADHVVDAHLVDVKGRLLD-R--KSMGEDLFW 203 (518)
Q Consensus 130 ~~~l~~~l~~~g~~l~~~~g---~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~i~~-~--~~~~~dl~~ 203 (518)
+.+|+++|.++|.. ++.+ ....+||||++++||.|.. +||.++|+|++++||++||++++ . ...++|+|+
T Consensus 133 ~~~l~~~l~~~Gl~--~~~~~~p~~~~~~igG~~~~~g~g~~--~yG~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l~~ 208 (520)
T 1wvf_A 133 FGQMYDYIQENNLP--VMLSFSAPSAIAGPVGNTMDRGVGYT--PYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQ 208 (520)
T ss_dssp HHHHHHHHHHTTCS--EECCCCSSCTTCCHHHHHHTTCBCSS--TTCBGGGGEEEEEEECTTSCEEECGGGGSTTCSCTT
T ss_pred HHHHHHHHHHcCCc--ccCCCCCCCCeeeeeecccCCCcCCc--cccchhhcEeeeEEEcCCCcEEEeCCCcCCCchhHh
Confidence 99999999998854 3333 3336889999999988875 89999999999999999999998 3 246789877
Q ss_pred HhhccCC---------CCeEEEEEEEEEEEecCCeeEEEEEeechhhhHHHHHHHHHHhh
Q 042207 204 AIRGGGG---------ASFGVIVAWKVELVTIPSTVTVCSSRRSLKRNLTRLVHRWQFVA 254 (518)
Q Consensus 204 a~rg~~~---------g~~Givt~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (518)
+.+|+.| ++|||||+++|||+|.|+....+.+.|+..+++.++++.++++.
T Consensus 209 ~~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~~~~~~~~~~~~~~~ 268 (520)
T 1wvf_A 209 IFKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVEIVDALRPLR 268 (520)
T ss_dssp TCSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCGGGHHHHHHHHHHHH
T ss_pred hhcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 7776632 59999999999999999977777788875555555555555543
No 15
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=100.00 E-value=1.4e-32 Score=289.92 Aligned_cols=200 Identities=20% Similarity=0.248 Sum_probs=168.4
Q ss_pred cccccCCCCCCcEEEecCCHHHHHHHHHHHHHc--CCeEEEEeCCCCCCCCCcccCCCeEEEEccCCcce-EEeCCCcEE
Q 042207 46 RRFLTAATPKPQVIVKPLQVSHIQSVIFCSQWH--GMQVRVRSGGHDYEGLSYISHVPYVVIDLINLRSI-SIDVEKTTA 122 (518)
Q Consensus 46 ~~~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~--~~~~~~~g~Gh~~~g~~~~~~~~~vvidl~~~~~i-~~d~~~~~v 122 (518)
.+|.. ....|.+|++|+|++||+++|++|+++ ++|+.++|+|||+.+.+...+ +++|||++||+| ++|+++++|
T Consensus 34 ~~W~~-~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~~~~--gvvIdl~~l~~i~~~d~~~~~v 110 (481)
T 4feh_A 34 TGWGR-TAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQNGG--GLVIDMTPLNTIHSIDADTKLV 110 (481)
T ss_dssp CCTTC-CSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTCCTT--SEEEECTTCCCEEEEETTTTEE
T ss_pred ecccC-CCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCCCcC--eEEEECccCCCceEEcCCCCEE
Confidence 35843 578999999999999999999999999 799999999999977665444 899999999997 999999999
Q ss_pred EEeCCCcHHHHHHHHHhhCCCceecCCCCCCccchhhhcCCCCCCccccCCccccceeEEEEEeeCCeEEe-ccC-CCch
Q 042207 123 WIQAGATIGELYHKIADTSGTLGFPAGVCPSVGVGGHFSGGGYGILLRKYGLAADHVVDAHLVDVKGRLLD-RKS-MGED 200 (518)
Q Consensus 123 ~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~i~~-~~~-~~~d 200 (518)
+||||+++.+|+++|.++|..+...+|. +.++|||.+.+|++|.++..||..+|+|++++||++||++++ +.+ +++|
T Consensus 111 ~v~aGv~l~~L~~~l~~~Gl~l~~~~g~-~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~~~~~~d 189 (481)
T 4feh_A 111 DIDAGVNLDQLMKAALPFGLWVPVLPGT-RQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPTGEDAE 189 (481)
T ss_dssp EEETTCBHHHHHHHHGGGTEECSCCCSC-SCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECSSSTTHH
T ss_pred EEcCCccHHHHHHHHHHcCCEEEEeCCc-CccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCCCCCChH
Confidence 9999999999999999998543333344 568999999999999999999999999999999999999998 666 8999
Q ss_pred hHHHhhccCCCCeEEEEEEEEEEEecCCeeEEEEEeechhhhHHHHHHHHHH
Q 042207 201 LFWAIRGGGGASFGVIVAWKVELVTIPSTVTVCSSRRSLKRNLTRLVHRWQF 252 (518)
Q Consensus 201 l~~a~rg~~~g~~Givt~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (518)
|||++||| .|+|||||+++||++|.++...... .+... +..++++.+++
T Consensus 190 Lf~a~rgs-~G~~GIIt~~tl~l~p~~~~~~~~~-~~~~~-~l~~~~~~~~~ 238 (481)
T 4feh_A 190 LFWATVGG-NGLTGIIMRATIEMTPTSTAYFIAD-GDVTA-SLDETIALHSD 238 (481)
T ss_dssp HHHHHTTC-TTTTCEEEEEEEECEECSCSEEEEE-EEECS-SHHHHHHHHSS
T ss_pred HHHHhhcc-CCCceEEEEEEEEEEeCCccEEEEE-EEeCC-CHHHHHHHHHH
Confidence 99999998 5899999999999999986433221 22222 24455665654
No 16
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.3e-33 Score=297.56 Aligned_cols=204 Identities=21% Similarity=0.248 Sum_probs=177.7
Q ss_pred ccccCCCCCCcEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCeEEEEccCCcce-EEeCCCcEEEEe
Q 042207 47 RFLTAATPKPQVIVKPLQVSHIQSVIFCSQWHGMQVRVRSGGHDYEGLSYISHVPYVVIDLINLRSI-SIDVEKTTAWIQ 125 (518)
Q Consensus 47 ~~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~g~~~~~~~~~vvidl~~~~~i-~~d~~~~~v~v~ 125 (518)
.|+......|.+|++|+|++||+++|++|+++++|++++|||||+.|.+.+.. ++++|||++||+| ++|+++.+++||
T Consensus 43 d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~g~~~~~~-ggvvIdl~~m~~i~~id~~~~~v~V~ 121 (476)
T 3pm9_A 43 EERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTPHN-GEVVISLKRMDKIREIDTSSNTITVE 121 (476)
T ss_dssp CTTCCCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSSSTTCCCS-SCEEEECTTCCCEEEEETTTTEEEEE
T ss_pred ccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCccCCC-CcEEEEeeCCCceEEEcCCCCeEEEC
Confidence 57666678999999999999999999999999999999999999998887643 4899999999997 899999999999
Q ss_pred CCCcHHHHHHHHHhhCCCceecCCCCCCccchhhhcCCCCCCccccCCccccceeEEEEEeeCCeEEe-c-----cCCCc
Q 042207 126 AGATIGELYHKIADTSGTLGFPAGVCPSVGVGGHFSGGGYGILLRKYGLAADHVVDAHLVDVKGRLLD-R-----KSMGE 199 (518)
Q Consensus 126 ~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~i~~-~-----~~~~~ 199 (518)
||+++.+|.++|.++|..+.+.++++..++|||++.+++.|..+.+||.++|+|++++||++||++++ . ...++
T Consensus 122 aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV~~dG~v~~~~~~~~k~~~g~ 201 (476)
T 3pm9_A 122 AGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVMNLLSKLKKDNTGY 201 (476)
T ss_dssp TTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEECTTSCEEECCCCCSCCCSSC
T ss_pred CCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEEccCCeEEEcCCcccCCCCCc
Confidence 99999999999999885444445677788999999999999999999999999999999999999996 2 34578
Q ss_pred hhHHHhhccCCCCeEEEEEEEEEEEecCCeeEEEEEeechhhhHHHHHHHHHH
Q 042207 200 DLFWAIRGGGGASFGVIVAWKVELVTIPSTVTVCSSRRSLKRNLTRLVHRWQF 252 (518)
Q Consensus 200 dl~~a~rg~~~g~~Givt~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (518)
||+|+++|+ +|+|||||+++|||+|.|+......+.|+..+++.+++..+++
T Consensus 202 dl~~l~~Gs-~GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 253 (476)
T 3pm9_A 202 DLRDLFIGA-EGTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQG 253 (476)
T ss_dssp CCHHHHTTS-TTSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred CHHHHhccC-CCCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHHH
Confidence 999999998 6899999999999999998776777777655555556666554
No 17
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=100.00 E-value=1.9e-31 Score=278.61 Aligned_cols=175 Identities=19% Similarity=0.270 Sum_probs=156.2
Q ss_pred ccccCCCCCCcEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCeEEEEccCCcce-EEeCCCcEEEEe
Q 042207 47 RFLTAATPKPQVIVKPLQVSHIQSVIFCSQWHGMQVRVRSGGHDYEGLSYISHVPYVVIDLINLRSI-SIDVEKTTAWIQ 125 (518)
Q Consensus 47 ~~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~g~~~~~~~~~vvidl~~~~~i-~~d~~~~~v~v~ 125 (518)
+|+......|.+|++|+|++||+++|++| +|+.++|||||+.+.+... .++++|||++||+| ++|+++++|+||
T Consensus 12 ~w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~~~-~~g~vi~l~~l~~i~~~d~~~~~v~v~ 86 (422)
T 2vfr_A 12 NWAGNITYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAEPG-DGGVLLSLAGLPSVVDVDTAARTVRVG 86 (422)
T ss_dssp CSSSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTCCC-TTCEEECSTTSCCCEEEETTTTEEEEE
T ss_pred cCCCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCccCC-CCcEEEEhhhCCCcEEEcCCCCEEEEc
Confidence 58888888999999999999999999999 8999999999998877632 24899999999996 999999999999
Q ss_pred CCCcHHHHHHHHHhhCCCceec-CCCCCCccchhhhcCCCCCCccccCCccccceeEEEEEeeCCeEEe-ccCCCchhHH
Q 042207 126 AGATIGELYHKIADTSGTLGFP-AGVCPSVGVGGHFSGGGYGILLRKYGLAADHVVDAHLVDVKGRLLD-RKSMGEDLFW 203 (518)
Q Consensus 126 ~G~~~~~l~~~l~~~g~~l~~~-~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~i~~-~~~~~~dl~~ 203 (518)
||+++.+|.++|.++|.. ++ .+.++.++|||.+++|++|.. ..||.++|+|+++++|++||++++ +..+++ ||
T Consensus 87 aG~~l~~l~~~l~~~Gl~--l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~~--f~ 161 (422)
T 2vfr_A 87 GGVRYAELARVVHARGLA--LPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARGDER--FG 161 (422)
T ss_dssp TTCBHHHHHHHHHHTTEE--CSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETTSTT--GG
T ss_pred CCCCHHHHHHHHHHcCCc--ccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCCCCC--cc
Confidence 999999999999999854 44 478888999999999999976 689999999999999999999998 555555 99
Q ss_pred HhhccCCCCeEEEEEEEEEEEecCCeeEE
Q 042207 204 AIRGGGGASFGVIVAWKVELVTIPSTVTV 232 (518)
Q Consensus 204 a~rg~~~g~~Givt~~~~~l~~~~~~~~~ 232 (518)
+++|+ +|+|||||+++||+.|.++....
T Consensus 162 ~~~g~-~G~lGvit~~~l~l~p~~~~~~~ 189 (422)
T 2vfr_A 162 GAVTS-LGALGVVTSLTLDLEPAYEMEQH 189 (422)
T ss_dssp GTSSC-TTTTCEEEEEEEECEECCEEEEE
T ss_pred eEEec-CCCCEEEEEEEEEEEecCceEEE
Confidence 99998 58999999999999999875433
No 18
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=100.00 E-value=2.2e-32 Score=294.61 Aligned_cols=200 Identities=20% Similarity=0.221 Sum_probs=167.8
Q ss_pred CCCCCCcEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccC--CCeEEEEccCCcce-EEeCCCcEEEEeCC
Q 042207 51 AATPKPQVIVKPLQVSHIQSVIFCSQWHGMQVRVRSGGHDYEGLSYISH--VPYVVIDLINLRSI-SIDVEKTTAWIQAG 127 (518)
Q Consensus 51 ~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~g~~~~~~--~~~vvidl~~~~~i-~~d~~~~~v~v~~G 127 (518)
.....|.+|++|+|++||+++|++|+++++||+++|||||+.|.+.+.. .++|+|||++||+| ++|+++.+|+||||
T Consensus 133 ~~~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aG 212 (584)
T 2uuu_A 133 QVKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVG 212 (584)
T ss_dssp CCCCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETT
T ss_pred ccCCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCC
Confidence 3456899999999999999999999999999999999999987766531 24899999999998 89999999999999
Q ss_pred CcHHHHHHHHHhhCCCceecCCCCCCccchhhhcCCCCCCccccCCccccceeEEEEEeeCCeEEe----ccCCCchhHH
Q 042207 128 ATIGELYHKIADTSGTLGFPAGVCPSVGVGGHFSGGGYGILLRKYGLAADHVVDAHLVDVKGRLLD----RKSMGEDLFW 203 (518)
Q Consensus 128 ~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~i~~----~~~~~~dl~~ 203 (518)
+++.+|.++|.++|..+...+++...++|||++++|++|+.+.+||.++|+|++++||++||++++ +...++||+|
T Consensus 213 v~~~~l~~~l~~~Gl~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~~~~~~g~dl~~ 292 (584)
T 2uuu_A 213 IMGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYKH 292 (584)
T ss_dssp CBHHHHHHHHHHTTEECCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC-------CCCTHH
T ss_pred CcHHHHHHHHHHcCCeeCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEEECCccccCCCcchhh
Confidence 999999999999884332222333457899999999999999999999999999999999999876 3457899999
Q ss_pred HhhccCCCCeEEEEEEEEEEEecCCeeEEEEEeechhhhHHHHHHHHH
Q 042207 204 AIRGGGGASFGVIVAWKVELVTIPSTVTVCSSRRSLKRNLTRLVHRWQ 251 (518)
Q Consensus 204 a~rg~~~g~~Givt~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (518)
+++|+ +|+|||||+++|||+|.|+....+.+.|+..+++.+++..+.
T Consensus 293 ~~~Gs-eGtlGIIT~~tlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 339 (584)
T 2uuu_A 293 IILGS-EGTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQIR 339 (584)
T ss_dssp HHTTC-TTSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHH
T ss_pred hhccC-CCCcEEEEEEEEEEEecccceEEEEEEcCCHHHHHHHHHHHH
Confidence 99999 689999999999999999977677777765444444454443
No 19
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.97 E-value=2.2e-30 Score=278.66 Aligned_cols=198 Identities=12% Similarity=0.106 Sum_probs=167.3
Q ss_pred cceEecC-CCCchhhHHhhcccccccccCCCCCCcEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccC---
Q 042207 24 SKVIYTQ-NNSSYSSILDFTIQNRRFLTAATPKPQVIVKPLQVSHIQSVIFCSQWHGMQVRVRSGGHDYEGLSYISH--- 99 (518)
Q Consensus 24 ~~~v~~p-~~~~y~~~~~~~~~n~~~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~g~~~~~~--- 99 (518)
++.|++| +++.|+++. .+|+......|.+|++|+|++||+++|++|+++++|+.++|+|||+.+.+...+
T Consensus 9 ~~~~~~p~~~~~y~~~~------~~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~ 82 (561)
T 2i0k_A 9 PTPPNFPNDIALFQQAY------QNWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANV 82 (561)
T ss_dssp CCCTTCCTTSCCEEEEE------ECTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCC
T ss_pred CCceecCCCCHhHHHHH------hhhhhccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcC
Confidence 5688899 999999863 368888888999999999999999999999999999999999999865443321
Q ss_pred CCeEEEEc-cCCcceEEeC--CCcEEEEeCCCcHHHHHHHHHhhCCCceecCCCCCCccchhhhcCCCCCCc--------
Q 042207 100 VPYVVIDL-INLRSISIDV--EKTTAWIQAGATIGELYHKIADTSGTLGFPAGVCPSVGVGGHFSGGGYGIL-------- 168 (518)
Q Consensus 100 ~~~vvidl-~~~~~i~~d~--~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g~~-------- 168 (518)
.++++||| ++||+|++|+ +.++|+||||+++.+|.++|.++|..+... +..+.++|||.+.+|++|.+
T Consensus 83 ~~gvvIdl~~~l~~i~vd~~~~~~~v~v~aGv~l~~L~~~l~~~Gl~l~~~-~~~~~~TvGG~i~~~~~G~~l~~gG~~~ 161 (561)
T 2i0k_A 83 EKVILADTMTHLNGITVNTGGPVATVTAGAGASIEAIVTELQKHDLGWANL-PAPGVLSIGGALAVNAHGAALPAVGQTT 161 (561)
T ss_dssp TTEEEEECTTTSCCEEEECCSSSCEEEEETTSBHHHHHHHHHHTTEECSSC-CSCTTCBHHHHHHTTCCCSCCCCTTCCC
T ss_pred CCeEEEechhhCCceEecCcCCccEEEEcCCCCHHHHHHHHHHcCCccccc-CCCCCcccCCCcccCCcccccccCCccc
Confidence 13899999 8999999998 789999999999999999999998544332 33466889999988888875
Q ss_pred --cccCCccccceeEEEEEeeCCe---EEe-ccCCCchhHHHhhccCCCCeEEEEEEEEEEEecCCeeEE
Q 042207 169 --LRKYGLAADHVVDAHLVDVKGR---LLD-RKSMGEDLFWAIRGGGGASFGVIVAWKVELVTIPSTVTV 232 (518)
Q Consensus 169 --~~~~G~~~d~v~~~~vV~~~G~---i~~-~~~~~~dl~~a~rg~~~g~~Givt~~~~~l~~~~~~~~~ 232 (518)
+.+||.++|+|++++||++||+ +++ ++ +++||+|+++|. | . ||||+++||++|.++....
T Consensus 162 ~s~~~~G~~~d~V~~~evV~~dG~~~~~~~~~~-~~~dl~~a~~g~-G-~-giIt~~tl~l~p~~~~~~~ 227 (561)
T 2i0k_A 162 LPGHTYGSLSNLVTELTAVVWNGTTYALETYQR-NDPRITPLLTNL-G-R-CFLTSVTMQAGPNFRQRCQ 227 (561)
T ss_dssp CTTCCSSCGGGGEEEEEEEEECSSSEEEEEEET-TSGGGHHHHSCT-T-S-SCEEEEEEECEECCEEEEE
T ss_pred ccccccccHhheEEEEEEEeCCCCEEEeeeccC-CCccHHHHHhcC-C-C-EEEEEEEEEEEECCceEEE
Confidence 6689999999999999999999 666 43 378999999865 3 4 8999999999999875443
No 20
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.97 E-value=2.5e-29 Score=270.84 Aligned_cols=201 Identities=17% Similarity=0.123 Sum_probs=164.1
Q ss_pred CCCCCcEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCC-CCCcccCCCeEEEEc-cCCcce-EEeCCCcEEEEeCCC
Q 042207 52 ATPKPQVIVKPLQVSHIQSVIFCSQWHGMQVRVRSGGHDYE-GLSYISHVPYVVIDL-INLRSI-SIDVEKTTAWIQAGA 128 (518)
Q Consensus 52 ~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~-g~~~~~~~~~vvidl-~~~~~i-~~d~~~~~v~v~~G~ 128 (518)
....|.+||+|+|++||+++|++|+++++||++||+|||+. |.+.+...++|+||| ++||+| ++|+++++|+|||||
T Consensus 67 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~Gt~~~~gg~~p~~~~gvvidl~~~mn~il~id~~~~~v~v~aGv 146 (560)
T 1e8g_A 67 DYFLASAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPGV 146 (560)
T ss_dssp TSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECTTC
T ss_pred cccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecCCCcCCcCCCCCCcCCEEEEEchHhcCCeEEEcCCCCEEEEeCCC
Confidence 45689999999999999999999999999999999999986 655531113899999 899998 999999999999999
Q ss_pred cHHHHHHHHHhhCCC--ceecCCCCCCccchhhhcCCCCCCccccCCccccceeEEEEEeeCCeEEe-cc--CCCc----
Q 042207 129 TIGELYHKIADTSGT--LGFPAGVCPSVGVGGHFSGGGYGILLRKYGLAADHVVDAHLVDVKGRLLD-RK--SMGE---- 199 (518)
Q Consensus 129 ~~~~l~~~l~~~g~~--l~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~i~~-~~--~~~~---- 199 (518)
++.+|.++|.++|.. +.+.++.....||||++++||.|.. +||..+|+|++++||++||++++ .. ..++
T Consensus 147 ~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~~~~ 224 (560)
T 1e8g_A 147 TYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPKRPE 224 (560)
T ss_dssp BHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCCGG
T ss_pred CHHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCcccccc
Confidence 999999999999865 4333344446789999998888864 99999999999999999999998 32 2231
Q ss_pred -----------hhHHHhhcc----------CCCCeEEEEEEEEEEEecCCeeEEEEEeechhhhHHHHHHHHHHhh
Q 042207 200 -----------DLFWAIRGG----------GGASFGVIVAWKVELVTIPSTVTVCSSRRSLKRNLTRLVHRWQFVA 254 (518)
Q Consensus 200 -----------dl~~a~rg~----------~~g~~Givt~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (518)
+++|+++++ .+|+|||||+++|||+|.|+....+.+.|+..+++.+++..++++.
T Consensus 225 ~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~~ 300 (560)
T 1e8g_A 225 TMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQAVDIIRPLR 300 (560)
T ss_dssp GTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEEEECSTTHHHHHHHHHHHHH
T ss_pred cccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHHHHHHHHHHH
Confidence 566766643 2479999999999999999987777888876555656666665554
No 21
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.96 E-value=1.6e-29 Score=266.47 Aligned_cols=188 Identities=18% Similarity=0.198 Sum_probs=154.8
Q ss_pred CCCchhhHHhhcccccccccCCCCCCcEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCccc---CCCeEEEEc
Q 042207 31 NNSSYSSILDFTIQNRRFLTAATPKPQVIVKPLQVSHIQSVIFCSQWHGMQVRVRSGGHDYEGLSYIS---HVPYVVIDL 107 (518)
Q Consensus 31 ~~~~y~~~~~~~~~n~~~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~g~~~~~---~~~~vvidl 107 (518)
+-+.|++.. .+|+......|.+|++|+|++||+++|++|+++++||+++|+|||+.+..... ..++|+|||
T Consensus 11 ~i~~y~~~~------~nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdl 84 (540)
T 3js8_A 11 EIPLYKQSF------KNWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDT 84 (540)
T ss_dssp TSCCEEEEE------ECTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTCSSCSEEEEET
T ss_pred ccchhccee------eccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCCCCCCeEEEEC
Confidence 455676653 25988888999999999999999999999999999999999999985222111 124899999
Q ss_pred c-CCcceEEeCC--CcEEEEeCCCcHHHHHHHHHhhCCCceecC-CCCCCccchhhhcCCCCCCc----------cccCC
Q 042207 108 I-NLRSISIDVE--KTTAWIQAGATIGELYHKIADTSGTLGFPA-GVCPSVGVGGHFSGGGYGIL----------LRKYG 173 (518)
Q Consensus 108 ~-~~~~i~~d~~--~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~-g~~~~vgigG~~~ggg~g~~----------~~~~G 173 (518)
+ +||+|++|++ .++|+||||+++.+|+++|.++|. .++. +..+.++|||.+++|++|.. +.+||
T Consensus 85 s~~Ln~I~vD~~~~~~tVtV~AGv~l~~L~~~L~~~GL--~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G 162 (540)
T 3js8_A 85 TRYLTAMSIDASGPVAKVTAQAGITMEALLTGLEKAGL--GVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYG 162 (540)
T ss_dssp TTTCCCEEEECSSSSEEEEEETTSBHHHHHHHHHHTTE--ECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSS
T ss_pred cCcCCCEEECCCCCccEEEEccCCCHHHHHHHHHHcCC--EEEecCCCCCeEEcccccCCCCcccccccccccccccccc
Confidence 6 7999999985 589999999999999999999884 4442 34566899999999998886 57999
Q ss_pred ccccceeEEEEEeeCCe-----EEe-ccCCCchhHHHhhccCCCCeEEEEEEEEEEEecCCee
Q 042207 174 LAADHVVDAHLVDVKGR-----LLD-RKSMGEDLFWAIRGGGGASFGVIVAWKVELVTIPSTV 230 (518)
Q Consensus 174 ~~~d~v~~~~vV~~~G~-----i~~-~~~~~~dl~~a~rg~~~g~~Givt~~~~~l~~~~~~~ 230 (518)
+++|+|++++||++||+ +++ +. +++||+ ++|+|+ |+ ||||+++||++|.++..
T Consensus 163 ~~~D~V~~levV~adG~~~~~~i~~~s~-~~~DL~-a~r~G~-G~-gIVTevtlrl~P~~~l~ 221 (540)
T 3js8_A 163 SISNLVLSLTAVVYDKASGAYALRKFAR-NDPQIA-PLLAHV-GR-SLIVEATLQAAPNQRLR 221 (540)
T ss_dssp CGGGGEEEEEEEEEETTTTEEEEEEEET-TSGGGH-HHHTCT-TS-SCEEEEEEEEEECCEEE
T ss_pred cHHHhEEEEEEEcCCCCCceeeEEEeCC-CChhHH-HHHhcC-CC-eEEEEEEEEEEECCceE
Confidence 99999999999999998 666 44 689985 556553 46 59999999999998643
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.96 E-value=3.8e-29 Score=267.53 Aligned_cols=197 Identities=12% Similarity=0.085 Sum_probs=164.0
Q ss_pred CCCCCcEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCC----CeEEEEccCCcce-EEeCCCcEEEEeC
Q 042207 52 ATPKPQVIVKPLQVSHIQSVIFCSQWHGMQVRVRSGGHDYEGLSYISHV----PYVVIDLINLRSI-SIDVEKTTAWIQA 126 (518)
Q Consensus 52 ~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~g~~~~~~~----~~vvidl~~~~~i-~~d~~~~~v~v~~ 126 (518)
....|.+||+|+|++||+++|++|+++++||.++|||||+.|.+.+.+. ++|+|||++||+| ++|+ .++|+|+|
T Consensus 42 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id~-~~~v~v~a 120 (571)
T 1f0x_A 42 GQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGK-GEQVLAYP 120 (571)
T ss_dssp CBBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEETT-TTEEEECT
T ss_pred cCCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCCceeECC-CCeEEEcC
Confidence 4578999999999999999999999999999999999999887776531 3899999999998 7985 57999999
Q ss_pred CCcHHHHHHHHHhhCCCceecC-CCCCCccchhhhcCCCCCCccccCCcccc----------------ceeEEEEEeeCC
Q 042207 127 GATIGELYHKIADTSGTLGFPA-GVCPSVGVGGHFSGGGYGILLRKYGLAAD----------------HVVDAHLVDVKG 189 (518)
Q Consensus 127 G~~~~~l~~~l~~~g~~l~~~~-g~~~~vgigG~~~ggg~g~~~~~~G~~~d----------------~v~~~~vV~~~G 189 (518)
|+++.+|.++|.++|+.+.... +.|...+|||.++++++|..+.+||..+| +|++++||++||
T Consensus 121 Gv~l~~L~~~l~~~Gl~~p~~~g~s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~dG 200 (571)
T 1f0x_A 121 GTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPE 200 (571)
T ss_dssp TCBHHHHHHHHGGGTEECSCCCGGGGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEECTTSCEEEEECSSBCCCSSHH
T ss_pred CcCHHHHHHHHHhcCccCCcCCCccCCCceecccccCCCCcccccCCCchhhhhhhheeccCCceEEEEeeeEEEEcCCC
Confidence 9999999999999984221122 34445689999999999999999999999 999999999999
Q ss_pred eEEe-cc-----------------CCCc-----------------hhHHHh--hccCCCCeEEEEEEEEEEEecCCeeEE
Q 042207 190 RLLD-RK-----------------SMGE-----------------DLFWAI--RGGGGASFGVIVAWKVELVTIPSTVTV 232 (518)
Q Consensus 190 ~i~~-~~-----------------~~~~-----------------dl~~a~--rg~~~g~~Givt~~~~~l~~~~~~~~~ 232 (518)
++++ .. ..+. ||+|.+ +|| +|+||| |+++|||+|.|+....
T Consensus 201 ~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~Gs-eGtlGV-t~~tl~l~p~p~~~~~ 278 (571)
T 1f0x_A 201 QILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGC-AGKLAV-FAVRLDTFEAEKNQQV 278 (571)
T ss_dssp HHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTC-TTSSEE-EEEEEECEECCSSCEE
T ss_pred cEEEecCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCC-CCceeE-EEEEEEEEecCCeEEE
Confidence 9886 21 1223 888888 888 689999 9999999999987777
Q ss_pred EEEeechhhhHHHHHHHHH
Q 042207 233 CSSRRSLKRNLTRLVHRWQ 251 (518)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~ 251 (518)
+.+.|+..+++.+++..+.
T Consensus 279 ~~~~~~~~~~a~~~~~~~~ 297 (571)
T 1f0x_A 279 FYIGTNQPEVLTEIRRHIL 297 (571)
T ss_dssp EEEEESCHHHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHH
Confidence 7777765554555555554
No 23
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.93 E-value=7.3e-26 Score=228.01 Aligned_cols=165 Identities=11% Similarity=0.082 Sum_probs=146.2
Q ss_pred CCCCCCcEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCeEEEEccCCcceEEeC--CCcEEEEeCCC
Q 042207 51 AATPKPQVIVKPLQVSHIQSVIFCSQWHGMQVRVRSGGHDYEGLSYISHVPYVVIDLINLRSISIDV--EKTTAWIQAGA 128 (518)
Q Consensus 51 ~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~g~~~~~~~~~vvidl~~~~~i~~d~--~~~~v~v~~G~ 128 (518)
.....|.+++.|+|++||+++|++|+++++|+.++|+|||..+.+. .+ |+||+++ |++|++++ +..+|+|+||+
T Consensus 26 ~igg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~-~~--GvVI~l~-~~~i~v~~~~~~~~v~v~AG~ 101 (357)
T 3i99_A 26 GIEQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH-YT--GMIVVNR-LNGIEHQQDDDYHRLHVAGGE 101 (357)
T ss_dssp CCSCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC-EE--EEEEEEC-CCCEEEEECSSEEEEEEETTS
T ss_pred CCCccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC-CC--eEEEEcC-CCceEEeccCCceEEEEeCCC
Confidence 3456789999999999999999999999999999999999876554 44 8999998 99998864 45689999999
Q ss_pred cHHHHHHHHHhhCCCceecCCCCCCccchhhhcCCCCCCccccCCc-cccceeEEEEEee-CCeEEe-ccCCCchhHHHh
Q 042207 129 TIGELYHKIADTSGTLGFPAGVCPSVGVGGHFSGGGYGILLRKYGL-AADHVVDAHLVDV-KGRLLD-RKSMGEDLFWAI 205 (518)
Q Consensus 129 ~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g~~~~~~G~-~~d~v~~~~vV~~-~G~i~~-~~~~~~dl~~a~ 205 (518)
+|.+|.+++.++|. .|.++..+|+| ++||+.+++++.||. ++|+|+++++|++ +|++++ + ..||+|+|
T Consensus 102 ~~~~l~~~a~~~Gl-----~GlE~l~gIPG-tVGGav~~NaGaYG~e~~d~v~~vevv~~~~G~i~~~~---~~dl~f~Y 172 (357)
T 3i99_A 102 DWPSLVSWCVEQGI-----GGLENLALIPG-CAGSAPIQNIGAYGVEFKDVCDYVEYLCLETGTVKRLT---MEECQFGY 172 (357)
T ss_dssp BHHHHHHHHHHTTC-----TTCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE---TGGGCCBT
T ss_pred cHHHHHHHHHHcCC-----cCccccCCCCc-hhHHHHHhchhhhhhhHHhhEeEEEEEECCCCcEEEEe---HHHcCccc
Confidence 99999999999882 48888899998 899999999999997 8999999999999 999998 4 35999999
Q ss_pred hccCC----CCeEEEEEEEEEEEecCC
Q 042207 206 RGGGG----ASFGVIVAWKVELVTIPS 228 (518)
Q Consensus 206 rg~~~----g~~Givt~~~~~l~~~~~ 228 (518)
|++.. +++||||+++|||+|.++
T Consensus 173 R~s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 173 RDSIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp TBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred ccccCCCccCCCEEEEEEEEEEEeCCc
Confidence 98754 479999999999999764
No 24
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.93 E-value=1.4e-25 Score=223.75 Aligned_cols=163 Identities=19% Similarity=0.177 Sum_probs=131.9
Q ss_pred CCCCCcEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCeEEEEccCCcceEEeCCCcEEEEeCCCcHH
Q 042207 52 ATPKPQVIVKPLQVSHIQSVIFCSQWHGMQVRVRSGGHDYEGLSYISHVPYVVIDLINLRSISIDVEKTTAWIQAGATIG 131 (518)
Q Consensus 52 ~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~g~~~~~~~~~vvidl~~~~~i~~d~~~~~v~v~~G~~~~ 131 (518)
....|.++++|+|++||+++|++|+++++|+.++|+|||+.+.+...+ +++|||++|++|++|. .+++|+||++|.
T Consensus 51 igg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~~~~~~--gvvI~l~~~~~I~~d~--~~v~v~aG~~~~ 126 (322)
T 3tx1_A 51 TGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKDGGIR--GVILHLDLLQTIERNN--TQIVAMSGAKLI 126 (322)
T ss_dssp CCCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEECTTCEE--EEEEECTTCCCEEEET--TEEEEETTSBHH
T ss_pred cCceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcCCCCCC--eEEEECCCCCcEEECC--CEEEEecCcCHH
Confidence 456899999999999999999999999999999999999876544333 8999999999998853 599999999999
Q ss_pred HHHHHHHhhCC-CceecCCCCCCccchhhhcCCCCCCccccC-CccccceeEEEEEeeCCeEEe-ccCCCchhHHHhhcc
Q 042207 132 ELYHKIADTSG-TLGFPAGVCPSVGVGGHFSGGGYGILLRKY-GLAADHVVDAHLVDVKGRLLD-RKSMGEDLFWAIRGG 208 (518)
Q Consensus 132 ~l~~~l~~~g~-~l~~~~g~~~~vgigG~~~ggg~g~~~~~~-G~~~d~v~~~~vV~~~G~i~~-~~~~~~dl~~a~rg~ 208 (518)
+|.+++.++|+ ++.+..|.+.+ |||.+..++ +.| |.++|+|+++++|++||++++ +. +|++|++|++
T Consensus 127 ~l~~~l~~~Gl~Gle~~~giPgT--VGGav~~Na-----GgyGg~~~d~v~~vevV~~~G~i~~~~~---~~~~~~yR~s 196 (322)
T 3tx1_A 127 DTAKFALNESLSGLEFACGIPGS--IGGALHMNA-----GAYGGEISDVLEAATVLTQTGELKKLKR---SELKAAYRFS 196 (322)
T ss_dssp HHHHHHHHTTEESCGGGTTCCSB--HHHHHHHTC-----EETTEEHHHHEEEEEEECTTSCEEEEEG---GGCC--CC-C
T ss_pred HHHHHHHHcCCcccccCCCCcch--hHHHHHhCc-----cCcccchHhhEEEEEEEcCCCCEEEech---HHcCcchhhc
Confidence 99999999884 33355555543 555554332 224 789999999999999999998 43 5999999988
Q ss_pred CCC-CeEEEEEEEEEEEecCC
Q 042207 209 GGA-SFGVIVAWKVELVTIPS 228 (518)
Q Consensus 209 ~~g-~~Givt~~~~~l~~~~~ 228 (518)
..+ .+||||+++|||+|.|+
T Consensus 197 ~~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 197 TIAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp TTTGGGCEEEEEEEECEECCH
T ss_pred ccCCCCEEEEEEEEEEEeCCH
Confidence 544 57899999999999874
No 25
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.91 E-value=1.2e-24 Score=218.44 Aligned_cols=159 Identities=19% Similarity=0.192 Sum_probs=132.2
Q ss_pred CCCCCcEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCeEEEEccCCcceEEeCCCcEEEEeCCCcHH
Q 042207 52 ATPKPQVIVKPLQVSHIQSVIFCSQWHGMQVRVRSGGHDYEGLSYISHVPYVVIDLINLRSISIDVEKTTAWIQAGATIG 131 (518)
Q Consensus 52 ~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~g~~~~~~~~~vvidl~~~~~i~~d~~~~~v~v~~G~~~~ 131 (518)
....|.+|++|+|++||+++|++|+++++|++++|||||+.+.+.+.+ +++|||++||+|++|. .+++|+||+++.
T Consensus 45 ~~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~~~~~~~--gvvI~l~~m~~i~id~--~~v~v~aGv~~~ 120 (326)
T 1hsk_A 45 TGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIR--GIVISLLSLDHIEVSD--DAIIAGSGAAII 120 (326)
T ss_dssp CCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTTCEE--EEEEECTTCCCEEEET--TEEEEETTSBHH
T ss_pred cCCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccccCCCCCC--eEEEEeCCCCceEEcC--CEEEEeCCCcHH
Confidence 456799999999999999999999999999999999999876555444 8999999999999873 699999999999
Q ss_pred HHHHHHHhhCC-CceecCCCCCCccchhhhcCCCCCCccccCC-ccccceeEEEEEeeCCeEEe-ccCCCchhHHHhhcc
Q 042207 132 ELYHKIADTSG-TLGFPAGVCPSVGVGGHFSGGGYGILLRKYG-LAADHVVDAHLVDVKGRLLD-RKSMGEDLFWAIRGG 208 (518)
Q Consensus 132 ~l~~~l~~~g~-~l~~~~g~~~~vgigG~~~ggg~g~~~~~~G-~~~d~v~~~~vV~~~G~i~~-~~~~~~dl~~a~rg~ 208 (518)
+|.+++.++|. +|.+.++... +|||.+.+++.| || .++|+|+++++|++||++++ .. .|++|++|++
T Consensus 121 ~l~~~l~~~Gl~gLe~~~~~Pg--tvGG~i~~nagg-----yG~~~~d~v~~v~vv~~~G~i~~~~~---~~~~~gyr~~ 190 (326)
T 1hsk_A 121 DVSRVARDYALTGLEFACGIPG--SIGGAVYMNAGA-----YGGEVKDCIDYALCVNEQGSLIKLTT---KELELDYRNS 190 (326)
T ss_dssp HHHHHHHHTTEESCGGGTTCCS--BHHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSCEEEEET---TTTTCBTTBC
T ss_pred HHHHHHHHCCCccccccCCCcc--hhhHHHhccccc-----CchhhhhhEEEEEEEeCCCCEEEECh---HHcCCCcccc
Confidence 99999999884 2223333322 577777665443 88 99999999999999999998 33 2888999874
Q ss_pred C---CCCeEEEEEEEEEEEec
Q 042207 209 G---GASFGVIVAWKVELVTI 226 (518)
Q Consensus 209 ~---~g~~Givt~~~~~l~~~ 226 (518)
. .| ||||+++||++|.
T Consensus 191 ~l~s~g--gIIt~~~l~l~p~ 209 (326)
T 1hsk_A 191 IIQKEH--LVVLEAAFTLAPG 209 (326)
T ss_dssp HHHHTT--CEEEEEEEECEEC
T ss_pred ccCCCC--EEEEEEEEEEEcC
Confidence 2 23 9999999999998
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.91 E-value=5e-24 Score=214.13 Aligned_cols=164 Identities=16% Similarity=0.057 Sum_probs=143.6
Q ss_pred CCCCCcEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCeEEEEccCCcceE-EeCCC-cEEEEeCCCc
Q 042207 52 ATPKPQVIVKPLQVSHIQSVIFCSQWHGMQVRVRSGGHDYEGLSYISHVPYVVIDLINLRSIS-IDVEK-TTAWIQAGAT 129 (518)
Q Consensus 52 ~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~g~~~~~~~~~vvidl~~~~~i~-~d~~~-~~v~v~~G~~ 129 (518)
....|.+++.|+|++||+++|++|+++++|+.++|||||..+.+. .+ |+||+|+ |+.|. ++.+. .+++|+||++
T Consensus 11 igg~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d~-~~--GvVI~l~-~~~i~~i~~~~~~~v~vgAG~~ 86 (340)
T 1uxy_A 11 IDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED-YR--GTVIINR-IKGIEIHDEPDAWYLHVGAGEN 86 (340)
T ss_dssp CCCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSC-EE--EEEEEEC-CCCEEEEECSSEEEEEEETTSB
T ss_pred CCccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccCC-CC--eEEEEcc-CCCcEEEecCCCeEEEEecCCC
Confidence 345799999999999999999999999999999999999876553 44 8999996 99985 56666 6899999999
Q ss_pred HHHHHHHHHhhCCCceecCCCCCCccchhhhcCCCCCCccccCCc-cccceeEEEEEee-CCeEEe-ccCCCchhHHHhh
Q 042207 130 IGELYHKIADTSGTLGFPAGVCPSVGVGGHFSGGGYGILLRKYGL-AADHVVDAHLVDV-KGRLLD-RKSMGEDLFWAIR 206 (518)
Q Consensus 130 ~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g~~~~~~G~-~~d~v~~~~vV~~-~G~i~~-~~~~~~dl~~a~r 206 (518)
|.+|.+++.++|. .|.++..+|+| ++||+..++++.||. ++|+|+++++|++ +|++++ +. .|++|++|
T Consensus 87 ~~~l~~~~~~~Gl-----~Gle~~~gIPG-tVGGa~~~NaGayG~ei~d~v~~v~vv~~~~G~v~~~~~---~d~~~gYR 157 (340)
T 1uxy_A 87 WHRLVKYTLQEGM-----PGLENLALIPG-CVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLTA---KECRFGYR 157 (340)
T ss_dssp HHHHHHHHHHTTC-----CSCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEET---GGGTCBTT
T ss_pred HHHHHHHHHHCCC-----CccccccCCcc-chhHHHHhccccchhhHHhheeEEEEEECCCCcEEEEeH---HHhccccC
Confidence 9999999999883 57788889998 999999999999995 8999999999996 999988 43 59999999
Q ss_pred ccCC----CCeEEEEEEEEEEEecCC
Q 042207 207 GGGG----ASFGVIVAWKVELVTIPS 228 (518)
Q Consensus 207 g~~~----g~~Givt~~~~~l~~~~~ 228 (518)
++.. +++||||+++|||.|.++
T Consensus 158 ~s~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 158 DSIFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp BCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred cCccCCcCCCCEEEEEEEEEEEcCCC
Confidence 8742 369999999999999764
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.88 E-value=3.5e-23 Score=200.80 Aligned_cols=152 Identities=16% Similarity=0.157 Sum_probs=130.8
Q ss_pred CCCCcEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCeEEEEccCCcceEEeCCCcEEEEeCCCcHHH
Q 042207 53 TPKPQVIVKPLQVSHIQSVIFCSQWHGMQVRVRSGGHDYEGLSYISHVPYVVIDLINLRSISIDVEKTTAWIQAGATIGE 132 (518)
Q Consensus 53 ~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~g~~~~~~~~~vvidl~~~~~i~~d~~~~~v~v~~G~~~~~ 132 (518)
...|. +++|+|++||+++| ++|+.++|+|||..+.+.+.+ +++||+|++|++|++|. +|+||++|.+
T Consensus 20 gg~a~-vv~p~s~edv~~~v------~ipv~v~GgGsnll~~d~~~~-~GvVI~l~~~~~I~vd~-----~v~aG~~~~~ 86 (268)
T 2gqt_A 20 GGPAE-LWTVETREELKRAT------EAPYRVLGNGSNLLVLDEGVP-ERVIRLAGEFQTYDLKG-----WVGAGTLLPL 86 (268)
T ss_dssp CCEEE-EEEECSHHHHHHHT------TSCEEECSSSSSEEECTTCCS-SEEEEECGGGGCBCTTS-----EEETTSBHHH
T ss_pred CcceE-EEEeCCHHHHHHHh------CCCeEEcCCCcCceecCCCcC-CeEEEEcCCCCCcEEcC-----EEECCCCHHH
Confidence 34466 99999999999999 999999999999876655442 38999999999998752 9999999999
Q ss_pred HHHHHHhhCCCceecCCCCCCccchhhhcCCCCCCccccCC-ccccceeEEEEEeeCCeEEe-ccCCCchhHHHhhccCC
Q 042207 133 LYHKIADTSGTLGFPAGVCPSVGVGGHFSGGGYGILLRKYG-LAADHVVDAHLVDVKGRLLD-RKSMGEDLFWAIRGGGG 210 (518)
Q Consensus 133 l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g~~~~~~G-~~~d~v~~~~vV~~~G~i~~-~~~~~~dl~~a~rg~~~ 210 (518)
|.+++.++| | .|.++..+|+| ++||+.+++++.|| .++|+|+++++| +||++++ +. .|++|+||++..
T Consensus 87 l~~~~~~~G--l---~Gle~~~giPG-tvGGav~~NaGayG~e~~d~v~~v~vv-~~G~v~~~~~---~~l~~~YR~s~~ 156 (268)
T 2gqt_A 87 LVQEAARAG--L---SGLEGLLGIPA-QVGGAVKMNAGTRFGEMADALEAVEVF-HDGAFHVYCP---EELGFGYRKSHL 156 (268)
T ss_dssp HHHHHHHTT--E---ESCGGGTTCCC-BHHHHHHTTCEETTEEGGGGEEEEEEE-ETTEEEEECG---GGSCCBTTBCCC
T ss_pred HHHHHHHcC--C---cCCccccCccc-hhHHHHHhccccCchhHHhheeEEEEE-CCCcEEEEch---HHcccccCCCCc
Confidence 999999988 3 47788889998 89999999999999 689999999999 9999998 43 589999999853
Q ss_pred CCeEEEEEEEEEEEecC
Q 042207 211 ASFGVIVAWKVELVTIP 227 (518)
Q Consensus 211 g~~Givt~~~~~l~~~~ 227 (518)
..-||||+++|||+|.+
T Consensus 157 ~~~gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 157 PPGGIVTRVRLKLKERP 173 (268)
T ss_dssp STTCEEEEEEECCEECC
T ss_pred CCCceEEEEEEEEEeCC
Confidence 21149999999999974
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.81 E-value=1e-19 Score=171.50 Aligned_cols=118 Identities=19% Similarity=0.224 Sum_probs=99.8
Q ss_pred eEEeCCCcEEEEeCCCcHHHHHHHHHhhCCCceecCCCCCCccchhhhcCCCCCCccccCCccccceeEEEEEeeCCeEE
Q 042207 113 ISIDVEKTTAWIQAGATIGELYHKIADTSGTLGFPAGVCPSVGVGGHFSGGGYGILLRKYGLAADHVVDAHLVDVKGRLL 192 (518)
Q Consensus 113 i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~i~ 192 (518)
|++|+++++|+|+||+++.+|+++|.++|..+...+|+++. +|||++.+|++| .+||.. |+|++++||++||+++
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~Gl~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~i~ 75 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTGLFPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGRRV 75 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTTEECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSCEE
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcCCEEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCCEE
Confidence 47899999999999999999999999988433333355565 999999999988 899999 9999999999999999
Q ss_pred e-cc-----CCCchhHHHhhccCCCCeEEEEEEEEEEEecCCeeEEEEEe
Q 042207 193 D-RK-----SMGEDLFWAIRGGGGASFGVIVAWKVELVTIPSTVTVCSSR 236 (518)
Q Consensus 193 ~-~~-----~~~~dl~~a~rg~~~g~~Givt~~~~~l~~~~~~~~~~~~~ 236 (518)
+ +. ..++||||+++|+ +|+|||||+++||++|.++....+.+.
T Consensus 76 ~~~~~~~kn~~gydl~~~~~Gs-~G~lGIVt~~tlrl~p~~~~~~~~~~~ 124 (219)
T 2yvs_A 76 RAGGVVVKNVQGYDLVRLFVGS-FGLLGRAEEVVLRLRPGRAQAFLRRPF 124 (219)
T ss_dssp EEECSSCSSSSCSCHHHHHTTC-TTTTCEEEEEEEECEECSEEEEEEEEC
T ss_pred EECCccccCCCCcchHHHhccC-CCceEEEEEEEEEEEECCcccEEEEEe
Confidence 7 32 2458999999998 689999999999999998865554444
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.18 E-value=5.5e-06 Score=81.14 Aligned_cols=159 Identities=18% Similarity=0.126 Sum_probs=99.6
Q ss_pred CCCcEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCC-CcccCCCeEEEEccC---CcceEEeCCCcEEEEeCCCc
Q 042207 54 PKPQVIVKPLQVSHIQSVIFCSQWHGMQVRVRSGGHDYEGL-SYISHVPYVVIDLIN---LRSISIDVEKTTAWIQAGAT 129 (518)
Q Consensus 54 ~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~g~-~~~~~~~~vvidl~~---~~~i~~d~~~~~v~v~~G~~ 129 (518)
+.|-.++.|+|.+|+.++++. ++.+..+.||||+.... .......+++||+++ |+.|+.+ .+.+++++|++
T Consensus 3 ~~~~~~~~P~s~~ea~~ll~~---~~~~~~ilaGGT~ll~~~~~~~~~~~~lIdl~~i~eL~~i~~~--~~~l~iGA~~t 77 (287)
T 1ffv_C 3 PPRFEYHAPKSVGEAVALLGQ---LGSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREE--GSTVVIGAMTV 77 (287)
T ss_dssp CCCCEEECCSSHHHHHHHHHH---HGGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEEE--TTEEEEETTCB
T ss_pred CCcceEECCCCHHHHHHHHHh---cCCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEec--CCEEEEccCCc
Confidence 345678999999999999975 34679999999995421 111011279999984 6777764 34699999999
Q ss_pred HHHHHHH-HHhhCC-Ccee---cCCCCC---CccchhhhcCCCCCCccccCCcccccee----EEEEEeeCCeEEeccCC
Q 042207 130 IGELYHK-IADTSG-TLGF---PAGVCP---SVGVGGHFSGGGYGILLRKYGLAADHVV----DAHLVDVKGRLLDRKSM 197 (518)
Q Consensus 130 ~~~l~~~-l~~~g~-~l~~---~~g~~~---~vgigG~~~ggg~g~~~~~~G~~~d~v~----~~~vV~~~G~i~~~~~~ 197 (518)
+.+|.+. +.+.+. .|.. ..+..+ ..+|||.+.++.- .+-....++ .+++..++|+.....
T Consensus 78 l~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~------~~D~~~~l~Al~A~v~~~~~~G~r~i~~-- 149 (287)
T 1ffv_C 78 ENDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP------GNDHPALSIAVEAHFVLEGPNGRRTVPA-- 149 (287)
T ss_dssp HHHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT------TCSHHHHHHHTTCEEEEEETTEEEEEES--
T ss_pred HHHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCC------cHHHHHHHHHcCcEEEEEcCCceEEEEH--
Confidence 9999952 333322 1111 012221 3578998887632 122222233 588888998322222
Q ss_pred CchhHHHhhccCCCCeEEEEEEEEEEEec
Q 042207 198 GEDLFWAIRGGGGASFGVIVAWKVELVTI 226 (518)
Q Consensus 198 ~~dl~~a~rg~~~g~~Givt~~~~~l~~~ 226 (518)
.|+|.++|-.....=.|||+++|.+.+.
T Consensus 150 -~df~~g~~~t~l~~~eii~~i~ip~~~~ 177 (287)
T 1ffv_C 150 -DGFFLGTYMTLLEENEVMVEIRVPAFAQ 177 (287)
T ss_dssp -TTTEEETTEESCCTTCEEEEEEEECCCT
T ss_pred -HHHhcCcccccCCCCCEEEEEEecCCCC
Confidence 4888877643222225999999977653
No 30
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.57 E-value=0.00011 Score=71.97 Aligned_cols=155 Identities=18% Similarity=0.149 Sum_probs=93.0
Q ss_pred CCCcEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCC-CcccCCCeEEEEccC---CcceEEeCCCcEEEEeCCCc
Q 042207 54 PKPQVIVKPLQVSHIQSVIFCSQWHGMQVRVRSGGHDYEGL-SYISHVPYVVIDLIN---LRSISIDVEKTTAWIQAGAT 129 (518)
Q Consensus 54 ~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~g~-~~~~~~~~vvidl~~---~~~i~~d~~~~~v~v~~G~~ 129 (518)
+.+-.++.|+|.+|+.++++. ++-+..+.+|||+..-. ........++||+++ |+.|+. +++.+++|++++
T Consensus 3 ~~~~~~~~P~sl~ea~~ll~~---~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~~t 77 (288)
T 1n62_C 3 PGSFDYHRPKSIADAVALLTK---LGEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIRE--EGTDVVIGAMTT 77 (288)
T ss_dssp CCCCEEECCSSHHHHHHHHHH---HGGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEE--ETTEEEEETTCB
T ss_pred CCceEEECcCCHHHHHHHHHh---cCCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEe--cCCEEEEccCCc
Confidence 345668999999999998863 34568999999995321 111111379999986 456766 445799999999
Q ss_pred HHHHHH--HHHhhCCCceec--CCCCC----CccchhhhcCCCCCCccccCCcccccee-------EEEEEeeCCeEEec
Q 042207 130 IGELYH--KIADTSGTLGFP--AGVCP----SVGVGGHFSGGGYGILLRKYGLAADHVV-------DAHLVDVKGRLLDR 194 (518)
Q Consensus 130 ~~~l~~--~l~~~g~~l~~~--~g~~~----~vgigG~~~ggg~g~~~~~~G~~~d~v~-------~~~vV~~~G~i~~~ 194 (518)
+.+|.+ .+.+.-..|.-. .-..+ ..+|||.+..+. ..+|.+. .+++..++|+-...
T Consensus 78 ~~~l~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~---------p~sD~~~~L~Al~A~v~l~~~~G~r~v~ 148 (288)
T 1n62_C 78 QHALIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGD---------PGNDMPALMQCLGAAYELTGPEGARIVA 148 (288)
T ss_dssp HHHHHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCC---------TTCSHHHHHHHHTCEEEEEETTEEEEEE
T ss_pred HHHHhcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCC---------CchHHHHHHHHhCcEEEEEeCCccEEEE
Confidence 999984 444321011100 01111 237899888762 1344433 56677788842222
Q ss_pred cCCCchhHHHhhccCCCCeEEEEEEEEEEEe
Q 042207 195 KSMGEDLFWAIRGGGGASFGVIVAWKVELVT 225 (518)
Q Consensus 195 ~~~~~dl~~a~rg~~~g~~Givt~~~~~l~~ 225 (518)
- .|+|.+++-....-=-|||++.|...+
T Consensus 149 ~---~df~~g~~~t~l~~~eil~~i~ip~~~ 176 (288)
T 1n62_C 149 A---RDYYQGAYFTAIEPGELLTAIRIPVPP 176 (288)
T ss_dssp H---HHHEEETTEESCCTTCEEEEEEEECCC
T ss_pred H---HHHhcCcccccCCCCCEEEEEEeCCCC
Confidence 1 366655432111122589999986554
No 31
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=97.12 E-value=0.00048 Score=71.62 Aligned_cols=150 Identities=18% Similarity=0.101 Sum_probs=96.2
Q ss_pred EEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCC---CcccCCCeEEEEccC---CcceEEeCCCcEEEEeCCCcHH
Q 042207 58 VIVKPLQVSHIQSVIFCSQWHGMQVRVRSGGHDYEGL---SYISHVPYVVIDLIN---LRSISIDVEKTTAWIQAGATIG 131 (518)
Q Consensus 58 ~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~g~---~~~~~~~~vvidl~~---~~~i~~d~~~~~v~v~~G~~~~ 131 (518)
.++.|+|.+|+.++++.. -+..+.+||++..-. .... ..++||+++ |+.|+.+ .+.++++||+++.
T Consensus 179 ~y~~P~sl~ea~~ll~~~----~~a~ilaGGT~L~~~~k~~~~~--~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vtl~ 250 (462)
T 2w3s_A 179 PAFLPETSDALADWYLAH----PEATLIAGGTDVSLWVTKALRD--LPEVAFLSHCKDLAQIRET--PDGYGIGAGVTIA 250 (462)
T ss_dssp CCBCCSSHHHHHHHHHHC----TTCEEESSCTTTTHHHHTSCCC--CCSEEECTTCGGGSCEEEE--TTEEEEETTCBHH
T ss_pred EEEecCCHHHHHHHHhhC----CCCEEEeCCchhhhhhhccCCC--CCEEEEcCCChhhCcEEEc--CCEEEEccCCcHH
Confidence 357899999999998752 257889999997532 1112 378999987 6778775 3469999999999
Q ss_pred HHHHHHHhhCCC-c----eecCC--CCCCccchhhhcCCCCCCccccCCcccccee----EEEEEeeCCeEEeccCCCch
Q 042207 132 ELYHKIADTSGT-L----GFPAG--VCPSVGVGGHFSGGGYGILLRKYGLAADHVV----DAHLVDVKGRLLDRKSMGED 200 (518)
Q Consensus 132 ~l~~~l~~~g~~-l----~~~~g--~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~----~~~vV~~~G~i~~~~~~~~d 200 (518)
+|.+.+.+ ... | ....+ .-+..+|||.+.++..+ +-...-++ .+++..++|+ .+ -.-.|
T Consensus 251 ~l~~~l~~-~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp~------sD~~~~L~ALdA~v~l~~~~G~-R~--vp~~d 320 (462)
T 2w3s_A 251 ALRAFAEG-PHPALAGLLRRFASEQVRQVATIGGNIANGSPI------GDGPPALIAMGASLTLRRGQER-RR--MPLED 320 (462)
T ss_dssp HHHHHHTT-TCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCTT------CSHHHHHHHTTCEEEEEBTTBC-CC--CBGGG
T ss_pred HHHHHHHH-HhHHHHHHHHHhCChhheeeEEcccccccCCCc------chHHHHHHHcCCEEEEEeCCce-EE--EEHHH
Confidence 99987433 211 1 00111 11224789988886632 45555666 7788888884 22 11247
Q ss_pred hHHHhhccCCCCeEEEEEEEEEEEe
Q 042207 201 LFWAIRGGGGASFGVIVAWKVELVT 225 (518)
Q Consensus 201 l~~a~rg~~~g~~Givt~~~~~l~~ 225 (518)
+|.++|-.....=-|||+++|...+
T Consensus 321 F~~g~~~t~L~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 321 FFLEYRKQDRRPGEFVESVTLPKSA 345 (462)
T ss_dssp GEEETTEESCCTTCEEEEEEEESCC
T ss_pred hhcccccccCCCCcEEEEEEEecCC
Confidence 7776653211112599999986544
No 32
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=96.45 E-value=0.0043 Score=60.43 Aligned_cols=150 Identities=15% Similarity=0.074 Sum_probs=88.1
Q ss_pred CCCcEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCC---CcccCCCeEEEEccCC---cceEEeCCCcEEEEeCC
Q 042207 54 PKPQVIVKPLQVSHIQSVIFCSQWHGMQVRVRSGGHDYEGL---SYISHVPYVVIDLINL---RSISIDVEKTTAWIQAG 127 (518)
Q Consensus 54 ~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~g~---~~~~~~~~vvidl~~~---~~i~~d~~~~~v~v~~G 127 (518)
+.|--++.|+|.+|+.++++. +-...+.+|||+..-. .... ...+||++++ +.|+. +++.+++|++
T Consensus 3 ~~~f~y~~P~sl~ea~~ll~~----~~~a~~laGGT~l~~~~k~~~~~--~~~lIdl~~i~eL~~I~~--~~~~l~IGA~ 74 (288)
T 1t3q_C 3 FPAFSYRAPASLQEVIQVLAD----DPDARIIAGGQSLLPLLAFRLVY--PSCLVDLRNVSELFEISQ--SAGILSVGAM 74 (288)
T ss_dssp CCCCEEECCSSHHHHHHHHHH----CTTCEEESSCTTHHHHHHTTCCC--CSEEEECTTCGGGGCEEE--ETTEEEEETT
T ss_pred CCCceEECCCCHHHHHHHHhh----CCCCEEEeCchhHHHHHhcCCCC--CCEEEECCCChhhcCeEE--cCCEEEEcCC
Confidence 345678999999999998863 3346788999994211 1112 2689999975 55665 4457999999
Q ss_pred CcHHHHHH--HHHhhCCCceec--C-CC---CCCccchhhhcCCCCCCccccCCcccccee-------EEEEEeeCCeEE
Q 042207 128 ATIGELYH--KIADTSGTLGFP--A-GV---CPSVGVGGHFSGGGYGILLRKYGLAADHVV-------DAHLVDVKGRLL 192 (518)
Q Consensus 128 ~~~~~l~~--~l~~~g~~l~~~--~-g~---~~~vgigG~~~ggg~g~~~~~~G~~~d~v~-------~~~vV~~~G~i~ 192 (518)
+++.+|.+ .+.++-..|.-. . |+ -+..+|||.++.+- ..+|... .+++..++|+-.
T Consensus 75 vt~~~l~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~---------p~sD~~~~L~Al~A~v~l~~~~g~R~ 145 (288)
T 1t3q_C 75 VTHFRNKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHAD---------AGAEMPFLMATLGATMYIASSAGVRS 145 (288)
T ss_dssp CBHHHHHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTC---------TTCHHHHHHHHTTCEEEEEETTEEEE
T ss_pred CcHHHHhcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCC---------CcHHHHHHHHHcCcEEEEEcCCceEE
Confidence 99999986 343321111000 1 11 12237889887542 1345544 566777777532
Q ss_pred eccCCCchhHHHhhccCCCCeEEEEEEEEEE
Q 042207 193 DRKSMGEDLFWAIRGGGGASFGVIVAWKVEL 223 (518)
Q Consensus 193 ~~~~~~~dl~~a~rg~~~g~~Givt~~~~~l 223 (518)
..- .|.|.+.+--.-.-=-|||++.|..
T Consensus 146 vp~---~dF~~g~~~t~L~~~Eil~~I~iP~ 173 (288)
T 1t3q_C 146 VSA---TDFMKGHYFTDLEAGEVLVRVEIPI 173 (288)
T ss_dssp EEH---HHHEEETTEESCCTTCEEEEEEEEC
T ss_pred EEH---HHHhcCcccccCCCCCEEEEEEecC
Confidence 211 2555433211011124899988754
No 33
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=96.14 E-value=0.0073 Score=59.32 Aligned_cols=153 Identities=7% Similarity=0.003 Sum_probs=88.6
Q ss_pred CCcEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCC---CcccCCCeEEEEccCC---cceEEeCCCcEEEEeCCC
Q 042207 55 KPQVIVKPLQVSHIQSVIFCSQWHGMQVRVRSGGHDYEGL---SYISHVPYVVIDLINL---RSISIDVEKTTAWIQAGA 128 (518)
Q Consensus 55 ~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~g~---~~~~~~~~vvidl~~~---~~i~~d~~~~~v~v~~G~ 128 (518)
.+..+++|+|.+|+.++++. +. ...+.+||++.... .... ...+||++++ +.|+. +.+.+++|+++
T Consensus 9 ~~~~y~~P~sl~ea~~ll~~---~~-~a~~laGGT~l~~~~k~~~~~--~~~lIdl~~i~eL~~I~~--~~~~l~IGA~v 80 (305)
T 3nvz_B 9 ERVTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGIEMKFKNQL--FPMIICPAWIPELNAVEH--GPEGISFGAAC 80 (305)
T ss_dssp SSCEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHHHHHHSCCC--CSEEEECTTCGGGGCEEE--CSSEEEEETTC
T ss_pred CCeEEEccCCHHHHHHHHHh---CC-CCEEEECccHHHHHHhcCCCC--CCEEEECCCChhhcceEE--CCCeEEEccCC
Confidence 46678999999999988753 22 36888999996421 1112 2689999975 55665 45579999999
Q ss_pred cHHHHHHHHHhh-------CC----Cce--ecC-CC---CCCccchhhhcCCCCCCccccCCcccccee----EEEEEee
Q 042207 129 TIGELYHKIADT-------SG----TLG--FPA-GV---CPSVGVGGHFSGGGYGILLRKYGLAADHVV----DAHLVDV 187 (518)
Q Consensus 129 ~~~~l~~~l~~~-------g~----~l~--~~~-g~---~~~vgigG~~~ggg~g~~~~~~G~~~d~v~----~~~vV~~ 187 (518)
++.++.+.+.+. .. .|. +.. ++ -+..+|||.+..+.. .+-..--++ .+++..+
T Consensus 81 t~~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p------~sD~~~~L~AldA~v~l~~~ 154 (305)
T 3nvz_B 81 ALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASP------ISDLNPVFMASGTKLTIVSR 154 (305)
T ss_dssp BHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCT------TCSSHHHHHHHTCEEEEEET
T ss_pred cHHHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCC------chHHHHHHHHcCCEEEEEcC
Confidence 999998776431 00 000 001 11 124478998887642 122222222 4667777
Q ss_pred CCeEEeccCCCchhHHHhhccCCCCeEEEEEEEEEE
Q 042207 188 KGRLLDRKSMGEDLFWAIRGGGGASFGVIVAWKVEL 223 (518)
Q Consensus 188 ~G~i~~~~~~~~dl~~a~rg~~~g~~Givt~~~~~l 223 (518)
+|+-...-+ .|+|-+++--....=-|||++.+..
T Consensus 155 ~G~R~vp~~--~df~~g~~~t~l~~~Eil~~I~iP~ 188 (305)
T 3nvz_B 155 GTRRTVPMD--HTFFPSYRKTLLGPEEILLSIEIPY 188 (305)
T ss_dssp TEEEEEECC--GGGCCSTTCCSCCTTCEEEEEEEEC
T ss_pred CCcEEEEee--hHhhcCcccccCCCCcEEEEEEecC
Confidence 885322111 1555443311011113999998754
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=93.15 E-value=0.11 Score=50.61 Aligned_cols=75 Identities=21% Similarity=0.206 Sum_probs=52.7
Q ss_pred CcEEEecCCHHHHHHHHHHHHHcCC-eEEEEeCCCCCCCC-CcccCCCeEEEEccCCc---ceEEeCCCcEEEEeCCCcH
Q 042207 56 PQVIVKPLQVSHIQSVIFCSQWHGM-QVRVRSGGHDYEGL-SYISHVPYVVIDLINLR---SISIDVEKTTAWIQAGATI 130 (518)
Q Consensus 56 p~~vv~p~~~~dv~~~v~~a~~~~~-~~~~~g~Gh~~~g~-~~~~~~~~vvidl~~~~---~i~~d~~~~~v~v~~G~~~ 130 (518)
|-.+++|+|.+|..++++ +++- ...+.+||++.... .........+||++++. .|+. +.+.+++|+++++
T Consensus 3 ~f~y~~P~sl~ea~~ll~---~~~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt~ 77 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLH---QYKDVPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRV--EENTIHIGALSTF 77 (296)
T ss_dssp CCEEECCSSHHHHHHHHH---HTTTSCCEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEE--CSSEEEEETTCBH
T ss_pred ceeEeCCCCHHHHHHHHH---hCCCCCeEEEECCcHHHHHhhcCCCCCCeEEEcccChhhcceEE--cCCeEEEccCCcH
Confidence 456799999999888764 3433 47888999996321 11111136899999864 4555 4568999999999
Q ss_pred HHHHH
Q 042207 131 GELYH 135 (518)
Q Consensus 131 ~~l~~ 135 (518)
.++.+
T Consensus 78 ~~l~~ 82 (296)
T 3hrd_C 78 TQIEN 82 (296)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99974
No 35
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=89.08 E-value=0.39 Score=47.20 Aligned_cols=75 Identities=17% Similarity=0.178 Sum_probs=54.0
Q ss_pred CCCcEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCC---CCcccCCCeEEEEccCC---cceEEeCCCcEEEEeCC
Q 042207 54 PKPQVIVKPLQVSHIQSVIFCSQWHGMQVRVRSGGHDYEG---LSYISHVPYVVIDLINL---RSISIDVEKTTAWIQAG 127 (518)
Q Consensus 54 ~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~g---~~~~~~~~~vvidl~~~---~~i~~d~~~~~v~v~~G 127 (518)
..|-.++.|+|.+|..++++. -.-.+.+||+++.. ..... ...+||++++ +.|+.+++ +.+++|++
T Consensus 4 m~~f~y~~P~sl~ea~~ll~~-----~~a~~lAGGT~l~~~~k~~~~~--p~~lIdi~~i~eL~~I~~~~~-~~l~IGA~ 75 (324)
T 1rm6_B 4 LTDFRTHRPATLADAVNALAA-----EATLPLGAGTDLLPNLRRGLGH--PAALVDLTGIDGLATISTLAD-GSLRIGAG 75 (324)
T ss_dssp CCCCEEECCSSHHHHHHHTTS-----TTEEEESSCTTHHHHHHTTSCC--CSEEEECTTSTTTTCEEECTT-SCEEEETT
T ss_pred CCceEEEccCCHHHHHHHHhC-----CCCEEEECchhHHHHHhccCCC--CCEEEECCCChhhcceEECCC-CeEEEccC
Confidence 345568999999999998862 24788999998631 11112 2689999876 55665433 36999999
Q ss_pred CcHHHHHHH
Q 042207 128 ATIGELYHK 136 (518)
Q Consensus 128 ~~~~~l~~~ 136 (518)
+++.+|.+.
T Consensus 76 vt~~~l~~~ 84 (324)
T 1rm6_B 76 ATLEAIAEH 84 (324)
T ss_dssp CBHHHHHHC
T ss_pred CcHHHHHhC
Confidence 999999753
No 36
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=74.74 E-value=1.3 Score=48.01 Aligned_cols=28 Identities=36% Similarity=0.574 Sum_probs=23.2
Q ss_pred hhhhhhhc-ccHHHHHHHHhhcCCCCCCc
Q 042207 474 IWGRKYFR-NNFDRLVVVKTMVDPHNFFR 501 (518)
Q Consensus 474 ~~~~~y~G-~n~~RL~~IK~kYDP~~vF~ 501 (518)
.|-..++| ..++.|++||+.+||+|+|+
T Consensus 625 ~~l~~~~g~~~l~lmr~IK~a~DP~gILN 653 (658)
T 4bby_A 625 QWLKESISDVGFGMLKSVKDYVDPTNIFG 653 (658)
T ss_dssp GGHHHHHCHHHHHHHHHHHHHHSTTCSSC
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcccCCC
Confidence 35556666 47999999999999999996
No 37
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=72.97 E-value=2.9 Score=48.90 Aligned_cols=78 Identities=5% Similarity=0.054 Sum_probs=54.1
Q ss_pred CCcEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCC-cccCCCeEEEEccCC---cceEEeCCCcEEEEeCCCcH
Q 042207 55 KPQVIVKPLQVSHIQSVIFCSQWHGMQVRVRSGGHDYEGLS-YISHVPYVVIDLINL---RSISIDVEKTTAWIQAGATI 130 (518)
Q Consensus 55 ~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~g~~-~~~~~~~vvidl~~~---~~i~~d~~~~~v~v~~G~~~ 130 (518)
.+...++|+|.+|+.++++. + -.-.+.+||++..-.- .......++||++++ +.|+.+ .+.+++||++++
T Consensus 232 ~~~~~~~P~sl~ea~~ll~~---~-~~a~lvaGgT~l~~~~k~~~~~~~~lIdl~~i~EL~~I~~~--~~~l~IGA~vtl 305 (1332)
T 3unc_A 232 ERVTWIQASTLKELLDLKAQ---H-PEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHG--PEGISFGAACAL 305 (1332)
T ss_dssp SSCEEEECCSHHHHHHHHHH---C-TTCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEEC--SSEEEEETTCBH
T ss_pred CceEEEccCCHHHHHHHHhh---C-CCCEEEEeCcHHHHHhhcCCCCCCeEEEcCCCHHhCceEEe--CCEEEEEecChH
Confidence 45668999999999887753 2 2347789999853111 111112689999975 456654 557999999999
Q ss_pred HHHHHHHH
Q 042207 131 GELYHKIA 138 (518)
Q Consensus 131 ~~l~~~l~ 138 (518)
.+|.+.+.
T Consensus 306 ~~l~~~l~ 313 (1332)
T 3unc_A 306 SSVEKTLL 313 (1332)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988654
No 38
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=72.18 E-value=5.5 Score=42.12 Aligned_cols=34 Identities=21% Similarity=0.137 Sum_probs=25.3
Q ss_pred ccHHHHHHHHhhcCCCCCCcCCCCCCCccccccc
Q 042207 482 NNFDRLVVVKTMVDPHNFFRNEQSIPSLSSWRKQ 515 (518)
Q Consensus 482 ~n~~RL~~IK~kYDP~~vF~~~~~i~~~~~~~~~ 515 (518)
..++-+++||+.+||+|+|+-..-+.=+..+|+|
T Consensus 523 ~~~~lm~~iK~~~DP~gILNPGk~~~~~~~~~~~ 556 (560)
T 1e8g_A 523 SFLRFNEVLKNAVDPNGIIAPGKSGVWPSQYSHV 556 (560)
T ss_dssp HHHHHHHHHHHHHCTTCCBCTTGGGCCCTTSCHH
T ss_pred HHHHHHHHHHHHcCccCCCCCCccccCccccccc
Confidence 4688899999999999999865444333566654
No 39
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=52.74 E-value=14 Score=38.22 Aligned_cols=28 Identities=14% Similarity=0.216 Sum_probs=23.6
Q ss_pred hhhhhhhc-ccHHHHHHHHhhcCCCCCCc
Q 042207 474 IWGRKYFR-NNFDRLVVVKTMVDPHNFFR 501 (518)
Q Consensus 474 ~~~~~y~G-~n~~RL~~IK~kYDP~~vF~ 501 (518)
.|-...+| +.++-+++||+.+||+|+++
T Consensus 443 ~~l~~~~~~~~~~~m~~iK~~~DP~~ilN 471 (476)
T 3pm9_A 443 DELAEVKDKTAIELMRSIKALLDPHGIMN 471 (476)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHCTTSCBS
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcccCCC
Confidence 46566676 47999999999999999986
No 40
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=51.17 E-value=17 Score=29.75 Aligned_cols=42 Identities=19% Similarity=0.274 Sum_probs=35.0
Q ss_pred ccccCCCCCCcEEEecCCHHHHHHHHHHHHHcCCeE-EEEeCCCC
Q 042207 47 RFLTAATPKPQVIVKPLQVSHIQSVIFCSQWHGMQV-RVRSGGHD 90 (518)
Q Consensus 47 ~~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~-~~~g~Gh~ 90 (518)
+|.. ...|..|+++.+++++.++.+.|++.|+|. .++=.|+.
T Consensus 48 ~W~~--~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 90 (120)
T 1xty_A 48 EWLH--QGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGKT 90 (120)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCSSS
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 5643 467999999999999999999999999997 55667764
No 41
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=48.66 E-value=7.9 Score=40.94 Aligned_cols=22 Identities=32% Similarity=0.557 Sum_probs=20.6
Q ss_pred ccHHHHHHHHhhcCCCCCCcCC
Q 042207 482 NNFDRLVVVKTMVDPHNFFRNE 503 (518)
Q Consensus 482 ~n~~RL~~IK~kYDP~~vF~~~ 503 (518)
+++++.+++++++||+++|.+.
T Consensus 533 p~~~~f~~~r~~~DP~g~F~n~ 554 (561)
T 2i0k_A 533 ENWDTARARYNQIDPHRVFTNG 554 (561)
T ss_dssp SSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCHHHHHHHHHhcCCCCccCCH
Confidence 8999999999999999999865
No 42
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=40.08 E-value=15 Score=38.92 Aligned_cols=27 Identities=15% Similarity=0.086 Sum_probs=20.7
Q ss_pred hcccHHHHHHHHhhcCCCCCCcCCCCCC
Q 042207 480 FRNNFDRLVVVKTMVDPHNFFRNEQSIP 507 (518)
Q Consensus 480 ~G~n~~RL~~IK~kYDP~~vF~~~~~i~ 507 (518)
|++... |++||+.+||.|+|+-.--+.
T Consensus 535 ~~~~~~-m~~iK~~~DP~~ilNPGk~~t 561 (571)
T 1f0x_A 535 YKAPET-LQKFYRENDPTNSMNPGIGKT 561 (571)
T ss_dssp SCCCHH-HHHHHHHHCTTCCBSTTTTTC
T ss_pred cCCHHH-HHHHHHHhCCCCCCCCCcCcC
Confidence 344444 999999999999998665543
No 43
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=39.62 E-value=28 Score=26.77 Aligned_cols=36 Identities=19% Similarity=-0.004 Sum_probs=29.5
Q ss_pred CCcEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCeEEEEccCCcc
Q 042207 55 KPQVIVKPLQVSHIQSVIFCSQWHGMQVRVRSGGHDYEGLSYISHVPYVVIDLINLRS 112 (518)
Q Consensus 55 ~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~g~~~~~~~~~vvidl~~~~~ 112 (518)
.-..++.|++-+|+++++...++.. .|+|+|.+|+.
T Consensus 5 ~~Ivv~~P~sy~Da~~I~d~Lr~~~----------------------~VvvNL~~ld~ 40 (87)
T 3p04_A 5 STIVPVELHSFEDAQVIGGAFRDGD----------------------AVVFDMSLLSR 40 (87)
T ss_dssp CSCEEEECSSGGGHHHHHHHHHTTC----------------------CEEEECTTSCH
T ss_pred cEEEEEecCcHHHHHHHHHHHHCCC----------------------EEEEECCCCCH
Confidence 3467899999999999999877643 68899988864
No 44
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=37.32 E-value=32 Score=28.00 Aligned_cols=42 Identities=14% Similarity=0.200 Sum_probs=35.0
Q ss_pred ccccCCCCCCcEEEecCCHHHHHHHHHHHHHcCCeE-EEEeCCCC
Q 042207 47 RFLTAATPKPQVIVKPLQVSHIQSVIFCSQWHGMQV-RVRSGGHD 90 (518)
Q Consensus 47 ~~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~-~~~g~Gh~ 90 (518)
+|. ....|..|+++.+++++.++.+.|++.|+|. .++-.|+.
T Consensus 45 ~W~--~~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~T 87 (117)
T 1rlk_A 45 EWY--DEGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYT 87 (117)
T ss_dssp HHH--HTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred HHH--HCCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 464 3568999999999999999999999999997 55567664
No 45
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=36.51 E-value=48 Score=27.22 Aligned_cols=42 Identities=14% Similarity=0.278 Sum_probs=34.7
Q ss_pred ccccCCCCCCcEEEecCCHHHHHHHHHHHHHcCCeE-EEEeCCCC
Q 042207 47 RFLTAATPKPQVIVKPLQVSHIQSVIFCSQWHGMQV-RVRSGGHD 90 (518)
Q Consensus 47 ~~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~-~~~g~Gh~ 90 (518)
+|.. ...+..|+++.+++++.++.+.|++.|+|. .|+-.|+.
T Consensus 42 ~W~~--~G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 42 KWLD--EGQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLT 84 (123)
T ss_dssp HTGG--GCSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTCC
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 4742 346899999999999999999999999996 56667765
No 46
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=35.67 E-value=50 Score=26.99 Aligned_cols=42 Identities=14% Similarity=0.184 Sum_probs=34.9
Q ss_pred ccccCCCCCCcEEEecCCHHHHHHHHHHHHHcCCeE-EEEeCCCC
Q 042207 47 RFLTAATPKPQVIVKPLQVSHIQSVIFCSQWHGMQV-RVRSGGHD 90 (518)
Q Consensus 47 ~~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~-~~~g~Gh~ 90 (518)
+|. ....|..|+++.+++++.++.+.|++.|+|. .++=.|+.
T Consensus 49 ~W~--~~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 91 (121)
T 1wn2_A 49 AWF--REGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGLT 91 (121)
T ss_dssp HHH--HTTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTCT
T ss_pred HHH--HCCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 464 3467999999999999999999999999997 55667774
No 47
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=35.03 E-value=15 Score=38.54 Aligned_cols=23 Identities=22% Similarity=0.352 Sum_probs=21.1
Q ss_pred cccHHHHHHHHhhcCCCCCCcCC
Q 042207 481 RNNFDRLVVVKTMVDPHNFFRNE 503 (518)
Q Consensus 481 G~n~~RL~~IK~kYDP~~vF~~~ 503 (518)
|+|+..-++++.++||+++|.++
T Consensus 511 ~~~~~~~~~~~~~~DP~~~F~n~ 533 (540)
T 3js8_A 511 AANWDAAKAALAAYDPYRLFSSP 533 (540)
T ss_dssp GGSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCCHHHHHHHHHhcCCCcccCCH
Confidence 58999999999999999999864
No 48
>2kxh_B Peptide of FAR upstream element-binding protein 1; RRM, FIR, FBP, protein-protein complex, protein binding; NMR {Homo sapiens}
Probab=35.00 E-value=19 Score=21.58 Aligned_cols=19 Identities=11% Similarity=0.319 Sum_probs=16.1
Q ss_pred hcccHHHHHHHHhhcCCCC
Q 042207 480 FRNNFDRLVVVKTMVDPHN 498 (518)
Q Consensus 480 ~G~n~~RL~~IK~kYDP~~ 498 (518)
|.+.++|-|||.+|.+++.
T Consensus 10 FadA~~RaRQIaAKig~~~ 28 (31)
T 2kxh_B 10 FKDALQRARQIAAKIGGDA 28 (31)
T ss_dssp HHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHhcCCC
Confidence 4578999999999998765
No 49
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=34.14 E-value=59 Score=26.25 Aligned_cols=42 Identities=19% Similarity=0.327 Sum_probs=33.5
Q ss_pred ccccCCCCCCcEEEecCCHHHHHHHHHHHHHcCCeE-EEEeCCCC
Q 042207 47 RFLTAATPKPQVIVKPLQVSHIQSVIFCSQWHGMQV-RVRSGGHD 90 (518)
Q Consensus 47 ~~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~-~~~g~Gh~ 90 (518)
+|. ....|..|+++.+++++.++.+.|++.|+|. .++-.|+.
T Consensus 43 ~W~--~~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~T 85 (115)
T 2zv3_A 43 EWL--REGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGHT 85 (115)
T ss_dssp HHH--HTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC--
T ss_pred HHH--HCCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCCce
Confidence 464 3568999999999999999999999999986 45556653
No 50
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=32.70 E-value=53 Score=26.66 Aligned_cols=41 Identities=17% Similarity=0.367 Sum_probs=33.7
Q ss_pred ccccCCCCCCcEEEecCCHHHHHHHHHHHHHcCCeE-EEEeCCC
Q 042207 47 RFLTAATPKPQVIVKPLQVSHIQSVIFCSQWHGMQV-RVRSGGH 89 (518)
Q Consensus 47 ~~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~-~~~g~Gh 89 (518)
+|.. ...|..|++..+++++.++.+.|++.|+|. .++=.|+
T Consensus 45 ~W~~--~g~~KVvlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 86 (117)
T 1q7s_A 45 QWEY--CGQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGR 86 (117)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred HHHh--CCCeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 5754 345999999999999999999999999986 5555665
No 51
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=32.29 E-value=28 Score=40.77 Aligned_cols=79 Identities=8% Similarity=0.106 Sum_probs=49.6
Q ss_pred cEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCC-CcccCCCeEEEEccCCcce-EEeCCCcEEEEeCCCcHHHHH
Q 042207 57 QVIVKPLQVSHIQSVIFCSQWHGMQVRVRSGGHDYEGL-SYISHVPYVVIDLINLRSI-SIDVEKTTAWIQAGATIGELY 134 (518)
Q Consensus 57 ~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~g~-~~~~~~~~vvidl~~~~~i-~~d~~~~~v~v~~G~~~~~l~ 134 (518)
...+.|.|.+|+.++... .-+.+ +..|++...-. ......-.++|++.+...+ .|...+..+++||+|++.++.
T Consensus 241 ~~w~~P~tl~el~~l~~~--~p~a~--lvaGnT~~gl~~~~~~~~~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~~~ 316 (1335)
T 3zyv_A 241 TTWIAPGTLNDLLELKMK--HPSAP--LVIGNTYLGLHMKFTDVSYPIIISPARILELFVVTNTKQGLTLGTGLSLTQVK 316 (1335)
T ss_dssp CEEEECSSHHHHHHHHHH--CTTSC--BCSSCTTHHHHHC--CCCCSEEECCTTCGGGSCEECCTTEEEEETTCBHHHHH
T ss_pred ceEecCCCHHHHHHHHHH--CCCCe--EEEecccceeeEeecCCCCCeEEEcCcchhHheEEecCCEEEEcccCcHHHHH
Confidence 346899999999887542 12333 45566653210 0001012588998865543 344456679999999999998
Q ss_pred HHHHh
Q 042207 135 HKIAD 139 (518)
Q Consensus 135 ~~l~~ 139 (518)
+.|.+
T Consensus 317 ~~l~~ 321 (1335)
T 3zyv_A 317 NVLSD 321 (1335)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87764
No 52
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=30.97 E-value=19 Score=38.21 Aligned_cols=28 Identities=18% Similarity=0.425 Sum_probs=18.7
Q ss_pred hhhhhhc-ccHHHHHHHHhhcCCCCCCcC
Q 042207 475 WGRKYFR-NNFDRLVVVKTMVDPHNFFRN 502 (518)
Q Consensus 475 ~~~~y~G-~n~~RL~~IK~kYDP~~vF~~ 502 (518)
|-...+| ..++=+++||+.+||+|+|+-
T Consensus 552 ~l~~~~g~~~~~lmr~iK~a~DP~gIlNP 580 (584)
T 2uuu_A 552 WMTRYATRGWINVYRSLKETIDPKDICNP 580 (584)
T ss_dssp -------CTHHHHHHHHHHHHCTTCCBSC
T ss_pred HHHHhcCHHHHHHHHHHHHHcCCCcCCCC
Confidence 3344455 468999999999999999863
No 53
>3fbi_A Mediator of RNA polymerase II transcription subunit 7; proline-rich stretches, right-handed four-helix bundle, protein-protein complex; 2.80A {Saccharomyces cerevisiae} PDB: 3fbn_A
Probab=28.44 E-value=32 Score=26.25 Aligned_cols=16 Identities=25% Similarity=0.524 Sum_probs=13.8
Q ss_pred hh-cccHHHHHHHHhhc
Q 042207 479 YF-RNNFDRLVVVKTMV 494 (518)
Q Consensus 479 y~-G~n~~RL~~IK~kY 494 (518)
+| .+|++||.++|+++
T Consensus 23 ~FT~eNl~kl~e~k~~~ 39 (84)
T 3fbi_A 23 FFTQSNLEKLPKYKEKK 39 (84)
T ss_dssp GCCHHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHh
Confidence 44 58999999999887
No 54
>2gvs_A Chemosensory protein CSP-SG4; alpha-coil, lipid binding protein; NMR {Schistocerca gregaria}
Probab=26.97 E-value=24 Score=28.39 Aligned_cols=14 Identities=21% Similarity=0.418 Sum_probs=12.0
Q ss_pred HHHHhhcCCCCCCc
Q 042207 488 VVVKTMVDPHNFFR 501 (518)
Q Consensus 488 ~~IK~kYDP~~vF~ 501 (518)
.+|++||||+|.+.
T Consensus 84 ~~L~~KyDP~g~y~ 97 (109)
T 2gvs_A 84 AQLKAKYDPDGTYS 97 (109)
T ss_dssp HHHHHHHCTTCTTT
T ss_pred HHHHHHHCCCchHH
Confidence 56889999999875
No 55
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=26.09 E-value=29 Score=20.72 Aligned_cols=26 Identities=4% Similarity=-0.085 Sum_probs=21.5
Q ss_pred ecCCHHHHHHHHHHHHHcCCeEEEEe
Q 042207 61 KPLQVSHIQSVIFCSQWHGMQVRVRS 86 (518)
Q Consensus 61 ~p~~~~dv~~~v~~a~~~~~~~~~~g 86 (518)
.-.+.||+.++-+.|++.+++++.-|
T Consensus 10 vggtpeelkklkeeakkanirvtfwg 35 (36)
T 2ki0_A 10 VGGTPEELKKLKEEAKKANIRVTFWG 35 (36)
T ss_dssp BCCCHHHHHHHHHHHHHHCCCCCBCC
T ss_pred ecCCHHHHHHHHHHHHhccEEEEeec
Confidence 34678999999999999999987543
No 56
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=24.56 E-value=1.2e+02 Score=25.90 Aligned_cols=40 Identities=15% Similarity=0.216 Sum_probs=33.8
Q ss_pred cEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCc
Q 042207 57 QVIVKPLQVSHIQSVIFCSQWHGMQVRVRSGGHDYEGLSY 96 (518)
Q Consensus 57 ~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~g~~~ 96 (518)
...+.|.+.+++.++++.+.+.+.-+.+..||.+..-.+.
T Consensus 47 ~~~iv~Dd~~~I~~~l~~a~~~~~DlVittGG~g~~~~D~ 86 (167)
T 2g2c_A 47 SEVVVPEGYDTVVEAIATALKQGARFIITAGGTGIRAKNQ 86 (167)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTCSEEEEESCCSSSTTCC
T ss_pred EEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcC
Confidence 4578899999999999999886689999999998765444
No 57
>1k19_A Chemosensory protein CSP2; pheromone, lipid transport; NMR {Mamestra brassicae} SCOP: a.118.21.1 PDB: 1kx8_A 1kx9_A 1n8u_A* 1n8v_A* 2jnt_A
Probab=23.46 E-value=28 Score=28.15 Aligned_cols=14 Identities=21% Similarity=0.328 Sum_probs=11.7
Q ss_pred HHHHhhcCCCCCCc
Q 042207 488 VVVKTMVDPHNFFR 501 (518)
Q Consensus 488 ~~IK~kYDP~~vF~ 501 (518)
.+|++||||+|.+.
T Consensus 82 ~~L~~KyDP~g~y~ 95 (112)
T 1k19_A 82 RELTAKYDPTGNWR 95 (112)
T ss_dssp HHHHHSSTTTCSSH
T ss_pred HHHHHHHCCCchHH
Confidence 46789999999875
No 58
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=21.88 E-value=1.5e+02 Score=25.47 Aligned_cols=40 Identities=13% Similarity=0.023 Sum_probs=33.3
Q ss_pred cEEEecCCHHHHHHHHHHHHHc-CCeEEEEeCCCCCCCCCc
Q 042207 57 QVIVKPLQVSHIQSVIFCSQWH-GMQVRVRSGGHDYEGLSY 96 (518)
Q Consensus 57 ~~vv~p~~~~dv~~~v~~a~~~-~~~~~~~g~Gh~~~g~~~ 96 (518)
...+.|.+.++|.++++.|.+. +.-+.+..||.+..-.+.
T Consensus 46 ~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~~~D~ 86 (172)
T 1mkz_A 46 DKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGDQ 86 (172)
T ss_dssp EEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSSTTCC
T ss_pred EEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCCC
Confidence 4568899999999999999886 689999999998755443
No 59
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=21.63 E-value=64 Score=30.58 Aligned_cols=79 Identities=13% Similarity=-0.011 Sum_probs=40.8
Q ss_pred CCcEEEecC--CHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCeEEEEccCCcceEEeCCCcEEEEeCCCcHHH
Q 042207 55 KPQVIVKPL--QVSHIQSVIFCSQWHGMQVRVRSGGHDYEGLSYISHVPYVVIDLINLRSISIDVEKTTAWIQAGATIGE 132 (518)
Q Consensus 55 ~p~~vv~p~--~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~g~~~~~~~~~vvidl~~~~~i~~d~~~~~v~v~~G~~~~~ 132 (518)
.+.+|+.+. +.+|..++++.|+++++++. |.|..|.-.+.. ++.--+... + ..+.+=-+.-+.|....+
T Consensus 89 i~~iVi~t~G~~~~~~~~l~~~A~~~gv~li----GPNc~Gi~~p~~--~~~~~~~~~--~-~~~G~i~~vsqSG~l~~~ 159 (288)
T 2nu8_A 89 IKLIITITEGIPTLDMLTVKVKLDEAGVRMI----GPNTPGVITPGE--CKIGIQPGH--I-HKPGKVGIVSRSGTLTYE 159 (288)
T ss_dssp CSEEEECCCCCCHHHHHHHHHHHHHHTCEEE----CSSCCEEEETTT--EEEESSCTT--S-CCEEEEEEEESCHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHHcCCEEE----ecCCcceecCCc--ceeEecccC--C-CCCCCEEEEECcHHHHHH
Confidence 344455554 56667777777777776553 445444332221 221111110 0 001111244578888888
Q ss_pred HHHHHHhhCC
Q 042207 133 LYHKIADTSG 142 (518)
Q Consensus 133 l~~~l~~~g~ 142 (518)
+..++.+.|.
T Consensus 160 ~~~~~~~~g~ 169 (288)
T 2nu8_A 160 AVKQTTDYGF 169 (288)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHhcCC
Confidence 9888888764
No 60
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=21.21 E-value=87 Score=23.34 Aligned_cols=34 Identities=18% Similarity=0.178 Sum_probs=29.2
Q ss_pred cEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCC
Q 042207 57 QVIVKPLQVSHIQSVIFCSQWHGMQVRVRSGGHD 90 (518)
Q Consensus 57 ~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~ 90 (518)
.++-...+.+|+..+++-.+.+|.|+.+.-.|-+
T Consensus 29 ryirtatssqdirdiiksmkdngkplvvfvngas 62 (112)
T 2lnd_A 29 RYIRTATSSQDIRDIIKSMKDNGKPLVVFVNGAS 62 (112)
T ss_dssp TTEEEECSHHHHHHHHHHHTTCCSCEEEEECSCC
T ss_pred ceeeeccchhhHHHHHHHHHhcCCeEEEEecCcc
Confidence 4566778999999999999999999998877755
No 61
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=20.92 E-value=1.6e+02 Score=25.81 Aligned_cols=40 Identities=15% Similarity=0.179 Sum_probs=33.0
Q ss_pred cEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCc
Q 042207 57 QVIVKPLQVSHIQSVIFCSQWHGMQVRVRSGGHDYEGLSY 96 (518)
Q Consensus 57 ~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~g~~~ 96 (518)
...+.|.+.+++.+.++.+.+.+.-+.+..||.+..-.+.
T Consensus 67 ~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~~D~ 106 (185)
T 3rfq_A 67 GVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTPRDV 106 (185)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSSTTCC
T ss_pred EEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCccc
Confidence 4567899999999999988767789999999998765443
No 62
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=20.74 E-value=64 Score=31.84 Aligned_cols=28 Identities=14% Similarity=0.227 Sum_probs=22.8
Q ss_pred CCHHHHHHHHHHHHHcCCeEEEE--eCCCC
Q 042207 63 LQVSHIQSVIFCSQWHGMQVRVR--SGGHD 90 (518)
Q Consensus 63 ~~~~dv~~~v~~a~~~~~~~~~~--g~Gh~ 90 (518)
=|.+|+.++|++|++.++.|.+- .=||.
T Consensus 92 YT~~di~eiv~YA~~rgI~VIPEID~PGH~ 121 (367)
T 1yht_A 92 LSYRQLDDIKAYAKAKGIELIPELDSPNHM 121 (367)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEEEESSSC
T ss_pred cCHHHHHHHHHHHHHcCCEEEEeccchHHH
Confidence 48999999999999999998653 34554
Done!