Your job contains 1 sequence.
>042210
MHQLKQIHSQTIKLGLLTKPHCPKQTRYLLLYEKGDLKYECKVFRKITQPSVFLWNTMIK
GYSRIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKGFTRDIAGSLEKSCIVMRVFVQNAL
ISTYCLCGEVDMARGIFYMSCEDDDGLHELIRIKAVDDDLHELFPEYLVQMLALPDTFMG
EGLEVIPKSQAPREETPRVGNLEEGTPQEGRPHEHSQDDMSLISNSIPQR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042210
(230 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2093920 - symbol:AT3G15930 "AT3G15930" species... 286 3.3e-24 1
TAIR|locus:2060640 - symbol:OTP81 "ORGANELLE TRANSCRIPT P... 188 1.3e-13 1
TAIR|locus:2034456 - symbol:AT1G31920 species:3702 "Arabi... 184 2.5e-13 1
TAIR|locus:4010713895 - symbol:AT4G21065 "AT4G21065" spec... 178 1.1e-12 1
TAIR|locus:2041198 - symbol:SLO1 "SLOW GROWTH 1" species:... 173 4.6e-12 1
TAIR|locus:2154855 - symbol:AT5G66520 "AT5G66520" species... 170 8.3e-12 1
TAIR|locus:2045580 - symbol:AT2G42920 species:3702 "Arabi... 167 4.4e-11 1
TAIR|locus:2095289 - symbol:AT3G09040 "AT3G09040" species... 163 8.6e-10 1
TAIR|locus:2090857 - symbol:AT3G26630 "AT3G26630" species... 154 5.5e-09 1
TAIR|locus:2049562 - symbol:AT2G01510 "AT2G01510" species... 154 8.4e-09 1
TAIR|locus:2202790 - symbol:AT1G26900 species:3702 "Arabi... 153 1.1e-08 1
TAIR|locus:2025946 - symbol:CRR28 "CHLORORESPIRATORY REDU... 152 1.7e-08 1
TAIR|locus:2205200 - symbol:OTP82 "AT1G08070" species:370... 151 3.0e-08 1
TAIR|locus:2013079 - symbol:AT1G19720 "AT1G19720" species... 149 7.0e-08 1
TAIR|locus:2150996 - symbol:AT5G15300 "AT5G15300" species... 146 8.4e-08 1
TAIR|locus:2056740 - symbol:OTP85 "ORGANELLE TRANSCRIPT P... 145 1.3e-07 1
TAIR|locus:2094812 - symbol:AT3G29230 "AT3G29230" species... 144 1.7e-07 1
TAIR|locus:2019160 - symbol:AT1G74630 species:3702 "Arabi... 143 2.5e-07 1
TAIR|locus:2039817 - symbol:AT2G39620 "AT2G39620" species... 138 1.4e-06 1
TAIR|locus:2102514 - symbol:AT3G56550 species:3702 "Arabi... 136 1.5e-06 1
TAIR|locus:2017744 - symbol:AT1G22830 species:3702 "Arabi... 137 1.5e-06 1
TAIR|locus:2154389 - symbol:LPA66 "LOW PSII ACCUMULATION ... 136 1.8e-06 1
TAIR|locus:2063771 - symbol:AT2G03380 species:3702 "Arabi... 136 1.9e-06 1
TAIR|locus:2098670 - symbol:AT3G50420 species:3702 "Arabi... 137 2.6e-06 2
TAIR|locus:2014270 - symbol:AT1G64310 species:3702 "Arabi... 132 4.3e-06 1
TAIR|locus:2122634 - symbol:OTP70 "AT4G25270" species:370... 131 5.3e-06 1
TAIR|locus:2117084 - symbol:AT4G18840 "AT4G18840" species... 131 5.5e-06 1
TAIR|locus:2195980 - symbol:AT1G77170 "AT1G77170" species... 126 1.7e-05 1
TAIR|locus:2091546 - symbol:AT3G13770 species:3702 "Arabi... 127 2.0e-05 1
TAIR|locus:2095487 - symbol:AT3G28660 "AT3G28660" species... 125 2.5e-05 1
TAIR|locus:2054789 - symbol:MEF21 "mitochondrial editing ... 125 2.7e-05 1
TAIR|locus:2049726 - symbol:AT2G37310 species:3702 "Arabi... 125 3.7e-05 1
TAIR|locus:2151694 - symbol:AT5G37570 "AT5G37570" species... 124 3.7e-05 1
TAIR|locus:2162207 - symbol:CRR21 "chlororespiratory redu... 126 3.8e-05 1
TAIR|locus:2144143 - symbol:AT5G06540 species:3702 "Arabi... 124 4.4e-05 1
TAIR|locus:2170877 - symbol:AT5G43790 species:3702 "Arabi... 122 4.9e-05 1
TAIR|locus:2148101 - symbol:AT5G16860 "AT5G16860" species... 125 5.1e-05 1
TAIR|locus:2196583 - symbol:ECB2 "EARLY CHLOROPLAST BIOGE... 125 5.2e-05 1
TAIR|locus:2175653 - symbol:AT5G39350 "AT5G39350" species... 123 6.6e-05 1
TAIR|locus:2168963 - symbol:AT5G47460 "AT5G47460" species... 122 6.9e-05 1
TAIR|locus:2130644 - symbol:AT4G15720 "AT4G15720" species... 122 7.5e-05 1
TAIR|locus:2089333 - symbol:AT3G16610 "AT3G16610" species... 122 8.2e-05 1
TAIR|locus:2131631 - symbol:AT4G35130 "AT4G35130" species... 123 8.2e-05 1
TAIR|locus:2096414 - symbol:AT3G03580 species:3702 "Arabi... 123 9.2e-05 1
TAIR|locus:2167593 - symbol:AT5G44230 species:3702 "Arabi... 121 0.00011 1
TAIR|locus:2038603 - symbol:AT2G27610 "AT2G27610" species... 122 0.00012 1
TAIR|locus:2141171 - symbol:AT4G21300 species:3702 "Arabi... 120 0.00020 1
TAIR|locus:2087969 - symbol:AT3G13880 species:3702 "Arabi... 119 0.00022 1
TAIR|locus:2077878 - symbol:AT3G08820 "AT3G08820" species... 117 0.00033 1
TAIR|locus:2181201 - symbol:AT5G27110 species:3702 "Arabi... 117 0.00033 1
TAIR|locus:2080727 - symbol:MEF10 "mitochondrial RNA edit... 116 0.00038 1
TAIR|locus:2100392 - symbol:AT3G47840 species:3702 "Arabi... 116 0.00045 1
TAIR|locus:2057574 - symbol:AT2G33760 species:3702 "Arabi... 115 0.00046 1
TAIR|locus:2097365 - symbol:AT3G49710 "AT3G49710" species... 116 0.00046 1
TAIR|locus:2097410 - symbol:AT3G49740 species:3702 "Arabi... 116 0.00047 1
TAIR|locus:2057986 - symbol:AT2G36980 species:3702 "Arabi... 115 0.00050 1
TAIR|locus:2161018 - symbol:AT5G56310 "AT5G56310" species... 114 0.00052 1
TAIR|locus:2012517 - symbol:AT1G14470 species:3702 "Arabi... 114 0.00053 1
TAIR|locus:2010652 - symbol:AT1G04840 "AT1G04840" species... 113 0.00058 2
TAIR|locus:2205425 - symbol:AT1G68930 "AT1G68930" species... 115 0.00063 1
TAIR|locus:2055919 - symbol:AT2G22070 "AT2G22070" species... 115 0.00067 1
TAIR|locus:2202074 - symbol:CRR22 "CHLORORESPIRATORY REDU... 115 0.00070 1
TAIR|locus:2088827 - symbol:AT3G26540 species:3702 "Arabi... 114 0.00075 1
TAIR|locus:2131939 - symbol:MEF29 "AT4G30700" species:370... 114 0.00088 1
>TAIR|locus:2093920 [details] [associations]
symbol:AT3G15930 "AT3G15930" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041
HOGENOM:HOG000237569 eggNOG:NOG235387 EMBL:AB026653 IPI:IPI00541778
RefSeq:NP_188214.1 UniGene:At.53331 ProteinModelPortal:Q9LSB8
SMR:Q9LSB8 EnsemblPlants:AT3G15930.1 GeneID:820836
KEGG:ath:AT3G15930 GeneFarm:3861 TAIR:At3g15930 InParanoid:Q9LSB8
OMA:DEFTMVS PhylomeDB:Q9LSB8 Genevestigator:Q9LSB8 Uniprot:Q9LSB8
Length = 687
Score = 286 (105.7 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 62/153 (40%), Positives = 92/153 (60%)
Query: 3 QLKQIHSQTIKLGLLTKPHCPKQTRYLLLYEK--GDLKYECKVFRKITQPSVFLWNTMIK 60
Q KQ+HSQ+I G+ P K+ ++ + G + Y K+F KI +P V +WN MIK
Sbjct: 49 QFKQLHSQSITRGVAPNPTFQKKL-FVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIK 107
Query: 61 GYSRIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKGFTRD---IAGSLEKSCIVMR---- 113
G+S++D GV +YL++LK V D++TFPFL G RD +A + C V++
Sbjct: 108 GWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLG 167
Query: 114 --VFVQNALISTYCLCGEVDMARGIFYMSCEDD 144
++VQNAL+ Y LCG +DMARG+F C++D
Sbjct: 168 SNLYVQNALVKMYSLCGLMDMARGVFDRRCKED 200
Score = 115 (45.5 bits), Expect = 0.00057, P = 0.00057
Identities = 34/142 (23%), Positives = 69/142 (48%)
Query: 5 KQIHSQTIKLGLLTKPHCPKQTRYLLLYEKGDLKYECK-VFRKITQPSVFLWNTMIKGYS 63
K++H +K GL + + Q + +Y L + VF + + VF WN MI GY+
Sbjct: 155 KKLHCHVVKFGLGSNLYV--QNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYN 212
Query: 64 RIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKGFTR----DIAGSLEK---SCIVM-RVF 115
R+ ++ + + +++ ++ V + T + ++ D+ + + C +
Sbjct: 213 RMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLR 272
Query: 116 VQNALISTYCLCGEVDMARGIF 137
++NAL++ Y CGE+D+A IF
Sbjct: 273 LENALVNAYAACGEMDIAVRIF 294
>TAIR|locus:2060640 [details] [associations]
symbol:OTP81 "ORGANELLE TRANSCRIPT PROCESSING 81"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0031425 "chloroplast RNA processing"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0009507
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:1.25.40.10
PROSITE:PS51375 EMBL:AC005496 Pfam:PF01535 TIGRFAMs:TIGR00756
UniGene:At.38446 UniGene:At.49361 GO:GO:0031425
HOGENOM:HOG000237569 EMBL:AY500319 IPI:IPI00520465 PIR:C84700
RefSeq:NP_180537.1 ProteinModelPortal:O82380 SMR:O82380
PRIDE:O82380 EnsemblPlants:AT2G29760.1 GeneID:817526
KEGG:ath:AT2G29760 GeneFarm:3355 TAIR:At2g29760 eggNOG:NOG235387
InParanoid:O82380 OMA:FVWSAMI PhylomeDB:O82380
ProtClustDB:CLSN2683829 Genevestigator:O82380 Uniprot:O82380
Length = 738
Score = 188 (71.2 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 50/154 (32%), Positives = 74/154 (48%)
Query: 1 MHQLKQIHSQTIKLGLLTKPH-CPKQTRYLLLYEKGDLKYECKVFRKITQPSVFLWNTMI 59
+ QLKQ H I+ G + P+ K L L+Y KVF +I +P+ F WNT+I
Sbjct: 43 LRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLI 102
Query: 60 KGYSRIDSHKNGVLMYLDLL-KSDVRRDNYTFPFLFKGFT--------RDIAGSLEKSCI 110
+ Y+ + +LD++ +S + YTFPFL K + + G KS +
Sbjct: 103 RAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAV 162
Query: 111 VMRVFVQNALISTYCLCGEVDMARGIFYMSCEDD 144
VFV N+LI Y CG++D A +F E D
Sbjct: 163 GSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKD 196
Score = 123 (48.4 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 30/119 (25%), Positives = 56/119 (47%)
Query: 35 GDLKYECKVFRKITQPSVFLWNTMIKGYSRIDSHKNGVLMYLDLLKSDVRRDNYTFPFLF 94
GDL CKVF I + V WN+MI G+ + S + ++ + DV+ + T +
Sbjct: 180 GDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVL 239
Query: 95 KG--------FTRDIAGSLEKSCIVMRVFVQNALISTYCLCGEVDMARGIFYMSCEDDD 145
F R + +E++ + + + + NA++ Y CG ++ A+ +F E D+
Sbjct: 240 SACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDN 298
>TAIR|locus:2034456 [details] [associations]
symbol:AT1G31920 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0010075 "regulation of
meristem growth" evidence=RCA] [GO:0016556 "mRNA modification"
evidence=RCA] InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC079041 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
EMBL:AK226634 IPI:IPI00541310 PIR:D86443 RefSeq:NP_174474.1
UniGene:At.17278 ProteinModelPortal:Q9C6T2 SMR:Q9C6T2
EnsemblPlants:AT1G31920.1 GeneID:840082 KEGG:ath:AT1G31920
GeneFarm:3171 TAIR:At1g31920 eggNOG:NOG324786 InParanoid:Q9C6T2
OMA:MEWQLKF PhylomeDB:Q9C6T2 ProtClustDB:CLSN2682592
Genevestigator:Q9C6T2 Uniprot:Q9C6T2
Length = 606
Score = 184 (69.8 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 45/146 (30%), Positives = 72/146 (49%)
Query: 3 QLKQIHSQTIKLGLLTKPHCPKQTRYLLLYEKG---DLKYECKVFRKITQPSVFLWNTMI 59
+ KQ+H++ IKL L + G + Y +FR I P F +NTMI
Sbjct: 45 EFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMI 104
Query: 60 KGYSRIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKGFTR--------DIAGSLEKSCIV 111
+GY + S + + Y ++++ DN+T+P L K TR I G + K +
Sbjct: 105 RGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLE 164
Query: 112 MRVFVQNALISTYCLCGEVDMARGIF 137
VFVQN+LI+ Y CGE++++ +F
Sbjct: 165 ADVFVQNSLINMYGRCGEMELSSAVF 190
>TAIR|locus:4010713895 [details] [associations]
symbol:AT4G21065 "AT4G21065" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL080282 EMBL:AL161554
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 EMBL:BX826462 EMBL:BX827021
IPI:IPI00846696 IPI:IPI00921709 PIR:A85240 PIR:T10649
RefSeq:NP_001078414.1 RefSeq:NP_001078415.1 UniGene:At.49734
ProteinModelPortal:A8MQA3 SMR:A8MQA3 PRIDE:A8MQA3
EnsemblPlants:AT4G21065.1 GeneID:5008150 KEGG:ath:AT4G21065
GeneFarm:3325 TAIR:At4g21065 eggNOG:NOG242330 OMA:PDTHTYP
PhylomeDB:A8MQA3 ProtClustDB:CLSN2699103 Genevestigator:A8MQA3
Uniprot:A8MQA3
Length = 595
Score = 178 (67.7 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 50/155 (32%), Positives = 82/155 (52%)
Query: 3 QLKQIHSQTIKLGL-LTKPHCPKQTRYLL--LYEKGDLKYECKVFRKITQP-SVFLWNTM 58
+L+QIH+ +I+ G+ ++ K + L L + Y KVF KI +P +VF+WNT+
Sbjct: 32 KLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTL 91
Query: 59 IKGYSRIDSHKNGVLMYLDLLKSD-VRRDNYTFPFLFKGFTR--DIA-GSLEKSCIVMR- 113
I+GY+ I + + +Y ++ S V D +T+PFL K T D+ G S ++
Sbjct: 92 IRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSG 151
Query: 114 ----VFVQNALISTYCLCGEVDMARGIFYMSCEDD 144
++VQN+L+ Y CG+V A +F E D
Sbjct: 152 FGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKD 186
Score = 115 (45.5 bits), Expect = 0.00047, P = 0.00047
Identities = 36/140 (25%), Positives = 62/140 (44%)
Query: 7 IHSQTIKLGLLTKPHCPKQTRYLLLYEK-GDLKYECKVFRKITQPSVFLWNTMIKGYSRI 65
IHS I+ G + + Q L LY GD+ KVF K+ + + WN++I G++
Sbjct: 143 IHSVVIRSGFGSLIYV--QNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 200
Query: 66 DSHKNGVLMYLDLLKSDVRRDNYTFPFLFKGFTRDIAGSLEKSCIVMRVFV--------Q 117
+ + +Y ++ ++ D +T L + A +L K V + V
Sbjct: 201 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS 260
Query: 118 NALISTYCLCGEVDMARGIF 137
N L+ Y CG V+ A+ +F
Sbjct: 261 NVLLDLYARCGRVEEAKTLF 280
>TAIR|locus:2041198 [details] [associations]
symbol:SLO1 "SLOW GROWTH 1" species:3702 "Arabidopsis
thaliana" [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC006592 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 HOGENOM:HOG000237569 EMBL:AY064984 IPI:IPI00525356
PIR:C84612 RefSeq:NP_179827.1 UniGene:At.28296
ProteinModelPortal:Q9SJZ3 SMR:Q9SJZ3 PRIDE:Q9SJZ3
EnsemblPlants:AT2G22410.1 GeneID:816772 KEGG:ath:AT2G22410
GeneFarm:3692 TAIR:At2g22410 eggNOG:NOG314086 InParanoid:Q9SJZ3
OMA:HCLSACS PhylomeDB:Q9SJZ3 ProtClustDB:CLSN2683739
Genevestigator:Q9SJZ3 Uniprot:Q9SJZ3
Length = 681
Score = 173 (66.0 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 46/149 (30%), Positives = 74/149 (49%)
Query: 1 MHQLKQIHSQTIKLGLLTKPHCPKQT-RYLLLYEKGDLKYECKVFRKITQPSVFLWNTMI 59
+H LKQI +Q I GL+ P + + L E L Y K+ + I P++F WN I
Sbjct: 67 LH-LKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTI 125
Query: 60 KGYSRIDSHKNGVLMYLDLLKS---DVRRDNYTFPFLFK--------GFTRDIAGSLEKS 108
+G+S ++ K L+Y +L+ + R D++T+P LFK I G + K
Sbjct: 126 RGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKL 185
Query: 109 CIVMRVFVQNALISTYCLCGEVDMARGIF 137
+ + V NA I + CG+++ AR +F
Sbjct: 186 RLELVSHVHNASIHMFASCGDMENARKVF 214
>TAIR|locus:2154855 [details] [associations]
symbol:AT5G66520 "AT5G66520" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016556 "mRNA modification"
evidence=RCA] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AB013389 Pfam:PF12854
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00529723
RefSeq:NP_201453.1 UniGene:At.55714 ProteinModelPortal:Q9FJY7
SMR:Q9FJY7 EnsemblPlants:AT5G66520.1 GeneID:836784
KEGG:ath:AT5G66520 GeneFarm:3455 TAIR:At5g66520 eggNOG:NOG260190
InParanoid:Q9FJY7 OMA:PHNAYTF PhylomeDB:Q9FJY7
ProtClustDB:CLSN2686844 Genevestigator:Q9FJY7 Uniprot:Q9FJY7
Length = 620
Score = 170 (64.9 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 49/153 (32%), Positives = 73/153 (47%)
Query: 3 QLKQIHSQTIKLGLLTKPHC-PKQTRYLLLYEKGD-LKYECKVFRKITQPSVFLWNTMIK 60
+LKQIH++ +K GL+ + K + + D L Y VF +P FLWN MI+
Sbjct: 29 ELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIR 88
Query: 61 GYSRIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKG------F--TRDIAGSLEKSCIVM 112
G+S D + +L+Y +L S + YTFP L K F T I + K
Sbjct: 89 GFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEN 148
Query: 113 RVFVQNALISTYCLCGEVDMARGIFYMSCEDDD 145
V+ N+LI++Y + G +A +F E DD
Sbjct: 149 DVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDD 181
>TAIR|locus:2045580 [details] [associations]
symbol:AT2G42920 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC006580 EMBL:AC006931 Pfam:PF01535 Pfam:PF13812
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569 EMBL:AK229283
IPI:IPI00518122 PIR:H84859 RefSeq:NP_181820.1 UniGene:At.73075
ProteinModelPortal:Q9SJG6 SMR:Q9SJG6 PaxDb:Q9SJG6 PRIDE:Q9SJG6
EnsemblPlants:AT2G42920.1 GeneID:818893 KEGG:ath:AT2G42920
GeneFarm:3678 TAIR:At2g42920 eggNOG:NOG237883 InParanoid:Q9SJG6
OMA:NYAYLVF PhylomeDB:Q9SJG6 ProtClustDB:CLSN2683945
Genevestigator:Q9SJG6 Uniprot:Q9SJG6
Length = 559
Score = 167 (63.8 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 43/147 (29%), Positives = 73/147 (49%)
Query: 1 MHQLKQIHSQTIKLGLLTKPHCPKQTRYLLLYEKGDLKYECKVFRKITQPSVFLWNTMIK 60
M +LKQIH+ IK GL++ + D+ Y VF +I + F+WNT+I+
Sbjct: 38 MRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIR 97
Query: 61 GYSRIDSHKNGVLMYLDLLKSD--VRRDNYTFPFLFKGF-----TRD---IAGSLEKSCI 110
G+SR + + +++D+L S V+ T+P +FK + RD + G + K +
Sbjct: 98 GFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGL 157
Query: 111 VMRVFVQNALISTYCLCGEVDMARGIF 137
F++N ++ Y CG + A IF
Sbjct: 158 EDDSFIRNTMLHMYVTCGCLIEAWRIF 184
>TAIR|locus:2095289 [details] [associations]
symbol:AT3G09040 "AT3G09040" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002686 GenomeReviews:BA000014_GR Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AC009326
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00542229
RefSeq:NP_187516.1 UniGene:At.40178 ProteinModelPortal:Q9SS83
SMR:Q9SS83 PRIDE:Q9SS83 EnsemblPlants:AT3G09040.1 GeneID:820057
KEGG:ath:AT3G09040 GeneFarm:3706 TAIR:At3g09040 eggNOG:NOG256475
InParanoid:Q9SS83 OMA:CRIHGDD PhylomeDB:Q9SS83
ProtClustDB:CLSN2684968 Genevestigator:Q9SS83 Uniprot:Q9SS83
Length = 1028
Score = 163 (62.4 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 45/149 (30%), Positives = 78/149 (52%)
Query: 7 IHSQTIKLGLLTKPHCPKQTRYLLLYEKGD-LKYECKVFRKITQPSVFLWNTMIKGYSRI 65
+H++ IKLGL + + + +Y K + ++ KVF + + + WN MI+GY+
Sbjct: 349 VHAEAIKLGLASNIYVGSSL--VSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHN 406
Query: 66 -DSHKNGVLMYLDLLKSDVRRDNYTFPFLFK--GFTRDIA-GSLEKSCIVMR-----VFV 116
+SHK + +++D+ S D++TF L + D+ GS S I+ + +FV
Sbjct: 407 GESHKV-MELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFV 465
Query: 117 QNALISTYCLCGEVDMARGIFYMSCEDDD 145
NAL+ Y CG ++ AR IF C+ D+
Sbjct: 466 GNALVDMYAKCGALEDARQIFERMCDRDN 494
>TAIR|locus:2090857 [details] [associations]
symbol:AT3G26630 "AT3G26630" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR002885 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:X98130 EMBL:AB026648
Pfam:PF13041 EMBL:X97487 EMBL:AY099658 EMBL:BT000240
IPI:IPI00546010 RefSeq:NP_189297.1 UniGene:At.84
ProteinModelPortal:Q38959 SMR:Q38959 PaxDb:Q38959 PRIDE:Q38959
EnsemblPlants:AT3G26630.1 GeneID:822275 KEGG:ath:AT3G26630
GeneFarm:592 TAIR:At3g26630 eggNOG:NOG276835 HOGENOM:HOG000115630
InParanoid:Q38959 OMA:SIVSWTT PhylomeDB:Q38959
ProtClustDB:CLSN2684869 Genevestigator:Q38959 Uniprot:Q38959
Length = 455
Score = 154 (59.3 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 43/144 (29%), Positives = 67/144 (46%)
Query: 3 QLKQIHSQTIKLGLLTKPHCPKQTRYLLLYEKGDLKYECKVFRKITQPSVFLWNTMIKGY 62
QLKQIH++ IK L +Q + G+ +Y VF ++ PS F WN MI+
Sbjct: 35 QLKQIHTKIIKHNLTNDQLLVRQL-ISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSL 93
Query: 63 SRIDSHKNGVLMYLDLLKSDVRR-DNYTFPFLFKG--------FTRDIAGSLEKSCIVMR 113
S + +L+++ ++ S + D +TFPF+ K + G K+
Sbjct: 94 SVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFND 153
Query: 114 VFVQNALISTYCLCGEVDMARGIF 137
VF QN L+ Y CG+ D R +F
Sbjct: 154 VFFQNTLMDLYFKCGKPDSGRKVF 177
>TAIR|locus:2049562 [details] [associations]
symbol:AT2G01510 "AT2G01510" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 GO:GO:0005739 EMBL:CP002685
GenomeReviews:CT485783_GR PROSITE:PS51375 EMBL:AC005560
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 HOGENOM:HOG000237569
IPI:IPI00535832 PIR:F84425 RefSeq:NP_178260.1 UniGene:At.66150
ProteinModelPortal:Q9ZVF4 SMR:Q9ZVF4 PaxDb:Q9ZVF4 PRIDE:Q9ZVF4
EnsemblPlants:AT2G01510.1 GeneID:814680 KEGG:ath:AT2G01510
GeneFarm:3359 TAIR:At2g01510 eggNOG:NOG303667 InParanoid:Q9ZVF4
OMA:AYSSVEF PhylomeDB:Q9ZVF4 ProtClustDB:CLSN2683536
Genevestigator:Q9ZVF4 Uniprot:Q9ZVF4
Length = 584
Score = 154 (59.3 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 61/233 (26%), Positives = 102/233 (43%)
Query: 3 QLKQIHSQTIKLGLLTKPHCPKQTRYLLLYEKGDLKYECKVFRKITQPSVFLWNTMIKGY 62
QLK+IH+ ++ G K Q L+ GD+ Y +VF ++ +P +FLWNT+ KGY
Sbjct: 26 QLKKIHAIVLRTGFSEKNSLLTQLLENLVVI-GDMCYARQVFDEMHKPRIFLWNTLFKGY 84
Query: 63 SRIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKGFTR--DIA-GSLEKSCIVMRVF---- 115
R +L+Y + VR D +T+PF+ K ++ D + G + +V F
Sbjct: 85 VRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLG 144
Query: 116 -VQNALISTYCLCGEVDMARGIFY-MSCEDDDGLHELIRIKAVDDDLHELFPEYLVQMLA 173
V L+ Y GE+ A +F M +D + + + V + EY +M A
Sbjct: 145 IVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAV-CVQTGNSAIALEYFNKMCA 203
Query: 174 LPDTFMGEGLEVIPKSQAPREETPRVGNLEEGTPQEGRPHEHSQDDMSLISNS 226
D + V+ A ++G+LE G R + D ++ N+
Sbjct: 204 --DAVQFDSFTVVSMLSA----CGQLGSLEIGEEIYDRARKEEIDCNIIVENA 250
>TAIR|locus:2202790 [details] [associations]
symbol:AT1G26900 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
PROSITE:PS51375 EMBL:AC005508 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF12854 HOGENOM:HOG000237569 IPI:IPI00537866 PIR:H86395
RefSeq:NP_174012.1 UniGene:At.65039 ProteinModelPortal:Q9ZVG8
SMR:Q9ZVG8 PaxDb:Q9ZVG8 PRIDE:Q9ZVG8 EnsemblPlants:AT1G26900.1
GeneID:838376 KEGG:ath:AT1G26900 GeneFarm:3642 TAIR:At1g26900
eggNOG:NOG299513 InParanoid:Q9ZVG8 OMA:HPSDAIL PhylomeDB:Q9ZVG8
ProtClustDB:CLSN2682854 Genevestigator:Q9ZVG8 Uniprot:Q9ZVG8
Length = 572
Score = 153 (58.9 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 40/144 (27%), Positives = 74/144 (51%)
Query: 3 QLKQIHSQTIKLGLLTKPHCPKQTRYLLLYEKG-DLKYECKVFRKITQPSVFLWNTMIKG 61
++ +IH +K GL + LL + D++Y +F ++ ++F++NTMI+G
Sbjct: 43 EVSRIHGYMVKTGLDKDDFAVSK---LLAFSSVLDIRYASSIFEHVSNTNLFMFNTMIRG 99
Query: 62 YSRIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKGFTRDIAGSLEKSC--IVMR----VF 115
YS D + ++ L + D ++F K +R++ S+ + I +R VF
Sbjct: 100 YSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVF 159
Query: 116 --VQNALISTYCLCGEVDMARGIF 137
++NALI YC+CG++ AR +F
Sbjct: 160 TDLRNALIHFYCVCGKISDARKVF 183
>TAIR|locus:2025946 [details] [associations]
symbol:CRR28 "CHLORORESPIRATORY REDUCTION28" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0004519 "endonuclease activity" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0016556 "mRNA modification"
evidence=RCA;IMP] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0009507
GO:GO:0016556 EMBL:AC007258 Gene3D:1.25.40.10 PROSITE:PS51375
GO:GO:0004519 EMBL:AC009317 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 EMBL:AK228565 IPI:IPI00526140
PIR:H96620 RefSeq:NP_176180.1 UniGene:At.11368 UniGene:At.66916
ProteinModelPortal:Q0WQW5 SMR:Q0WQW5 STRING:Q0WQW5 PaxDb:Q0WQW5
PRIDE:Q0WQW5 EnsemblPlants:AT1G59720.1 GeneID:842263
KEGG:ath:AT1G59720 GeneFarm:3437 TAIR:At1g59720 eggNOG:NOG287891
InParanoid:Q0WQW5 OMA:LLDACCK PhylomeDB:Q0WQW5
ProtClustDB:CLSN2679697 ArrayExpress:Q0WQW5 Genevestigator:Q0WQW5
Uniprot:Q0WQW5
Length = 638
Score = 152 (58.6 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 51/155 (32%), Positives = 73/155 (47%)
Query: 1 MHQLKQIHSQTIKLGLLTKPHCPKQTRYLLLYEK--------GDLKYECKVFRKITQPSV 52
M QLKQ+H+ T++ T P P L LY K D+ Y +VF I S
Sbjct: 61 MSQLKQLHAFTLRT---TYPEEPAT---LFLYGKILQLSSSFSDVNYAFRVFDSIENHSS 114
Query: 53 FLWNTMIKGYSRIDSHKNGVLM-YLDLL-KSDVRRDNYTFPFLFKGFTRDIAGSLEKS-- 108
F+WNT+I+ + S K M Y +L + + D +TFPF+ K S K
Sbjct: 115 FMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVH 174
Query: 109 CIVMR------VFVQNALISTYCLCGEVDMARGIF 137
C +++ V+V N LI Y CG +D+AR +F
Sbjct: 175 CQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVF 209
Score = 117 (46.2 bits), Expect = 0.00030, P = 0.00030
Identities = 40/145 (27%), Positives = 65/145 (44%)
Query: 5 KQIHSQTIKLGLLTKPHCPKQTRYLLLYEK-GDLKYECKVFRKITQPSVFLWNTMIKGYS 63
KQ+H Q +K G + + LY G L KVF ++ + S+ WN+MI
Sbjct: 171 KQVHCQIVKHGFGGDVYV--NNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALV 228
Query: 64 RIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFK---GFTRDIAGS-----LEKSC---IVM 112
R + + + ++ ++ +S D YT + G G+ L + C + M
Sbjct: 229 RFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAM 287
Query: 113 RVFVQNALISTYCLCGEVDMARGIF 137
V V+N+LI YC CG + MA +F
Sbjct: 288 DVLVKNSLIEMYCKCGSLRMAEQVF 312
>TAIR|locus:2205200 [details] [associations]
symbol:OTP82 "AT1G08070" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] [GO:0031425 "chloroplast RNA
processing" evidence=IMP] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AC026875
GO:GO:0031425 Pfam:PF12854 Pfam:PF13041 eggNOG:KOG4197
HOGENOM:HOG000237569 IPI:IPI00516672 RefSeq:NP_172286.1
UniGene:At.43030 ProteinModelPortal:Q9LN01 SMR:Q9LN01
EnsemblPlants:AT1G08070.1 GeneID:837325 KEGG:ath:AT1G08070
GeneFarm:3172 TAIR:At1g08070 InParanoid:Q9LN01 OMA:EEWKEGA
PhylomeDB:Q9LN01 ProtClustDB:CLSN2682772 Genevestigator:Q9LN01
Uniprot:Q9LN01
Length = 741
Score = 151 (58.2 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 41/154 (26%), Positives = 76/154 (49%)
Query: 1 MHQLKQIHSQTIKLGLLTKPHC-PKQTRYLLLYEKGD-LKYECKVFRKITQPSVFLWNTM 58
+ L+ IH+Q IK+GL + K + +L + L Y VF+ I +P++ +WNTM
Sbjct: 46 LQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTM 105
Query: 59 IKGYSRIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKGFTRD--------IAGSLEKSCI 110
+G++ + + +Y+ ++ + ++YTFPF+ K + I G + K
Sbjct: 106 FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGC 165
Query: 111 VMRVFVQNALISTYCLCGEVDMARGIFYMSCEDD 144
+ ++V +LIS Y G ++ A +F S D
Sbjct: 166 DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD 199
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 33/114 (28%), Positives = 57/114 (50%)
Query: 34 KGDLKYECKVFRKITQPSVFLWNTMIKGYSRIDSHKNGVLMYLDLLKSDVRRDNYTFPFL 93
+G ++ K+F +I V WN MI GY+ ++K + ++ D++K++VR D T +
Sbjct: 213 RGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTV 272
Query: 94 FKGFTRDIAGSLEKSCIV----------MRVFVQNALISTYCLCGEVDMARGIF 137
+ +GS+E V + + NALI Y CGE++ A G+F
Sbjct: 273 VSACAQ--SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 324
>TAIR|locus:2013079 [details] [associations]
symbol:AT1G19720 "AT1G19720" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0009507 Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC007797 EMBL:AC024609 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 EMBL:AK229137 EMBL:AJ006040
IPI:IPI00522498 PIR:C86330 PIR:T52647 RefSeq:NP_173402.2
UniGene:At.16215 ProteinModelPortal:Q9FXH1 SMR:Q9FXH1 PaxDb:Q9FXH1
PRIDE:Q9FXH1 EnsemblPlants:AT1G19720.1 GeneID:838561
KEGG:ath:AT1G19720 GeneFarm:3162 TAIR:At1g19720 eggNOG:NOG325213
InParanoid:Q9FXH1 OMA:TWNIMIS PhylomeDB:Q9FXH1
ProtClustDB:CLSN2680057 Genevestigator:Q9FXH1 Uniprot:Q9FXH1
Length = 894
Score = 149 (57.5 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 44/168 (26%), Positives = 80/168 (47%)
Query: 13 KLGLLTKPHCPKQTRYLLLYEK-GDLKYECKVFRKITQPSVFLWNTMIKGYSRIDSHKNG 71
+ GL T+P +T+ L +Y K G + KVF + + ++F W+ MI YSR + +
Sbjct: 106 RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREV 165
Query: 72 VLMYLDLLKSDVRRDNYTFPFLFKGFTR--DI-AGSLEKSCIVMR-----VFVQNALIST 123
++ ++K V D++ FP + +G D+ AG + S ++ + V N++++
Sbjct: 166 AKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAV 225
Query: 124 YCLCGEVDMARGIFYMSCEDDDGLHELIRIKAVDDDLHELFPEYLVQM 171
Y CGE+D A F E D + + + HE E + +M
Sbjct: 226 YAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEM 273
Score = 114 (45.2 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 35/128 (27%), Positives = 61/128 (47%)
Query: 5 KQIHSQTIKLGLLTKPHCPKQTRYLL-LYEK-GDLKYECKVFRKITQPSVFLWNTMIKGY 62
K IHS IKLG+ + C + + +L +Y K G+L + K FR++ + V WN+++ Y
Sbjct: 201 KVIHSVVIKLGMSS---CLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAY 257
Query: 63 SRIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKGFTR--------DIAGSLEKSCIVMRV 114
+ H+ V + ++ K + T+ L G+ + D+ +E I V
Sbjct: 258 CQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADV 317
Query: 115 FVQNALIS 122
F A+IS
Sbjct: 318 FTWTAMIS 325
Score = 41 (19.5 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 118 NALISTYCLCGEVDMARGIFYMSCED 143
+++I + L G VD + +FY D
Sbjct: 629 SSIILAHGLMGNVDEGKKVFYSIAND 654
>TAIR|locus:2150996 [details] [associations]
symbol:AT5G15300 "AT5G15300" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AL353993 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 EMBL:BX832059 IPI:IPI00547309
PIR:T49965 RefSeq:NP_197034.2 UniGene:At.66735
ProteinModelPortal:Q9LXF2 PRIDE:Q9LXF2 EnsemblPlants:AT5G15300.1
GeneID:831382 KEGG:ath:AT5G15300 GeneFarm:4219 TAIR:At5g15300
eggNOG:NOG243318 InParanoid:Q9LXF2 OMA:AVAWSAM
ProtClustDB:CLSN2681047 Genevestigator:Q9LXF2 Uniprot:Q9LXF2
Length = 548
Score = 146 (56.5 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 42/143 (29%), Positives = 73/143 (51%)
Query: 4 LKQIHSQTIKLGLLTKPHCPKQTRYLL-LYEKGDLKYECKVFRKITQPSVFLWNTMIKGY 62
LKQIH+ + GL++ + Y L G LKY K+F +I +P V + N +++G
Sbjct: 28 LKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGS 87
Query: 63 SRIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKGFTR------DIA--GSLEKSCIVMRV 114
++ + V +Y ++ K V D YTF F+ K ++ A G + + V+
Sbjct: 88 AQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNE 147
Query: 115 FVQNALISTYCLCGEVDMARGIF 137
+V+NALI + CG++ +A +F
Sbjct: 148 YVKNALILFHANCGDLGIASELF 170
>TAIR|locus:2056740 [details] [associations]
symbol:OTP85 "ORGANELLE TRANSCRIPT PROCESSING 85"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0009507 "chloroplast" evidence=IDA] [GO:0031425
"chloroplast RNA processing" evidence=IMP] [GO:0016556 "mRNA
modification" evidence=RCA] InterPro:IPR011990 EMBL:AC004138
InterPro:IPR002885 GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 GO:GO:0031425 HOGENOM:HOG000237569
EMBL:AF517844 IPI:IPI00532421 PIR:H84442 RefSeq:NP_178398.1
UniGene:At.41442 ProteinModelPortal:Q8LK93 SMR:Q8LK93 PaxDb:Q8LK93
PRIDE:Q8LK93 EnsemblPlants:AT2G02980.1 GeneID:814827
KEGG:ath:AT2G02980 GeneFarm:3321 TAIR:At2g02980 eggNOG:NOG294028
InParanoid:O80613 OMA:PTLINMY PhylomeDB:Q8LK93
ProtClustDB:CLSN2683708 Genevestigator:Q8LK93 Uniprot:Q8LK93
Length = 603
Score = 145 (56.1 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 40/148 (27%), Positives = 73/148 (49%)
Query: 1 MHQLKQIHSQTIKLGLLTKPHCPKQTRYLLLYE-KGDLKYECKVFRKITQPSVFLWNTMI 59
+ +L QI + IK + K + + + Y +F +++P + ++N+M
Sbjct: 42 LRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMA 101
Query: 60 KGYSRIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKGFTRDIAGSLEKS----CIVMR-- 113
+GYSR + +++++L+ + DNYTFP L K +A +LE+ C+ M+
Sbjct: 102 RGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACA--VAKALEEGRQLHCLSMKLG 159
Query: 114 ----VFVQNALISTYCLCGEVDMARGIF 137
V+V LI+ Y C +VD AR +F
Sbjct: 160 LDDNVYVCPTLINMYTECEDVDSARCVF 187
>TAIR|locus:2094812 [details] [associations]
symbol:AT3G29230 "AT3G29230" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AB026657
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00545218
RefSeq:NP_189568.1 UniGene:At.65178 ProteinModelPortal:Q9LS72
SMR:Q9LS72 PaxDb:Q9LS72 PRIDE:Q9LS72 EnsemblPlants:AT3G29230.1
GeneID:822578 KEGG:ath:AT3G29230 GeneFarm:3696 TAIR:At3g29230
eggNOG:NOG247239 InParanoid:Q9LS72 OMA:NTILDGY PhylomeDB:Q9LS72
ProtClustDB:CLSN2684108 Genevestigator:Q9LS72 Uniprot:Q9LS72
Length = 600
Score = 144 (55.7 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 48/181 (26%), Positives = 90/181 (49%)
Query: 1 MHQLKQIHSQTIKLGLLTKPH-CPKQTRYLLLYEKGDLKYECKVFRKITQPSVFLWNTMI 59
++Q+KQ+H+Q I+ L H PK L L + +L +VF ++ +P+V L N++I
Sbjct: 32 LNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAV--RVFNQVQEPNVHLCNSLI 89
Query: 60 KGYSRIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKGFT--------RDIAGSLEKSCIV 111
+ +++ ++ ++ + + DN+T+PFL K + + + +EK +
Sbjct: 90 RAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLS 149
Query: 112 MRVFVQNALISTYCLCGEVDM--ARGIFY-MSCEDDDGLHELIR--IKAVD-DDLHELFP 165
++V NALI Y CG + + A +F MS D + ++ +KA + D LF
Sbjct: 150 SDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFD 209
Query: 166 E 166
E
Sbjct: 210 E 210
>TAIR|locus:2019160 [details] [associations]
symbol:AT1G74630 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC011765 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:AK220733
EMBL:AK220737 IPI:IPI00540769 PIR:D96775 RefSeq:NP_177601.1
UniGene:At.34855 UniGene:At.70345 ProteinModelPortal:Q9CA54
SMR:Q9CA54 PRIDE:Q9CA54 EnsemblPlants:AT1G74630.1 GeneID:843802
KEGG:ath:AT1G74630 GeneFarm:3465 TAIR:At1g74630 eggNOG:NOG304289
HOGENOM:HOG000237569 InParanoid:Q9CA54 OMA:KVFDEMH PhylomeDB:Q9CA54
ProtClustDB:CLSN2682262 Genevestigator:Q9CA54 Uniprot:Q9CA54
Length = 643
Score = 143 (55.4 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 40/147 (27%), Positives = 70/147 (47%)
Query: 1 MHQLKQIHSQTIKLGLLTKPHCP-KQTRYLLLYEKGDLKYECKVFRKITQPSVFLWNTMI 59
+ L QIH IK G+ T + K + + L Y ++ +P F++NT++
Sbjct: 18 LRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLV 77
Query: 60 KGYSRIDSHKNGVLMYLDLL-KSDVRRDNYTFPFLFKGFT--RDIAGSLEKSCIVMR--- 113
+GYS D N V ++++++ K V D+++F F+ K R + + C ++
Sbjct: 78 RGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGL 137
Query: 114 ---VFVQNALISTYCLCGEVDMARGIF 137
+FV LI Y CG V+ AR +F
Sbjct: 138 ESHLFVGTTLIGMYGGCGCVEFARKVF 164
>TAIR|locus:2039817 [details] [associations]
symbol:AT2G39620 "AT2G39620" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC004218 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
IPI:IPI00546453 PIR:T00570 RefSeq:NP_181492.1 UniGene:At.66334
ProteinModelPortal:O80647 SMR:O80647 EnsemblPlants:AT2G39620.1
GeneID:818545 KEGG:ath:AT2G39620 GeneFarm:3675 TAIR:At2g39620
eggNOG:NOG285557 HOGENOM:HOG000115625 InParanoid:O80647 OMA:ATAVISM
PhylomeDB:O80647 ProtClustDB:CLSN2683357 Genevestigator:O80647
Uniprot:O80647
Length = 836
Score = 138 (53.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 43/144 (29%), Positives = 65/144 (45%)
Query: 4 LKQIHSQTIKLGLLTKPHCPKQTRYLLLYEKGDLKYECKVFRKITQPSVFLWNTMIKGYS 63
L Q+H I GL KPH Y L +++ DL +F + P V LWN+MI+GY+
Sbjct: 21 LLQVHGSLIVSGL--KPHNQLINAYSL-FQRQDLSRV--IFDSVRDPGVVLWNSMIRGYT 75
Query: 64 RIDSHKN--GVLMYLDLLKSDVRRDNYTFPFLFKGF--TRDIAGSLEKSCIVMR------ 113
R H+ G Y+ K + D Y+F F K + D L ++
Sbjct: 76 RAGLHREALGFFGYMSEEKG-IDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESD 134
Query: 114 VFVQNALISTYCLCGEVDMARGIF 137
V++ AL+ YC ++ AR +F
Sbjct: 135 VYIGTALVEMYCKARDLVSARQVF 158
>TAIR|locus:2102514 [details] [associations]
symbol:AT3G56550 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR PROSITE:PS51375 EMBL:AL163972
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
EMBL:DQ446769 IPI:IPI00541669 PIR:T49056 RefSeq:NP_191214.1
UniGene:At.65282 ProteinModelPortal:Q9LXY5 SMR:Q9LXY5
EnsemblPlants:AT3G56550.1 GeneID:824822 KEGG:ath:AT3G56550
GeneFarm:3526 TAIR:At3g56550 eggNOG:NOG269480 InParanoid:Q9LXY5
OMA:CSHQGLV PhylomeDB:Q9LXY5 ProtClustDB:CLSN2684194
Genevestigator:Q9LXY5 Uniprot:Q9LXY5
Length = 581
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 45/148 (30%), Positives = 68/148 (45%)
Query: 1 MHQLKQIHSQTIKLGLLTKPHCPKQT-RYLLLYEKGDLKYECKVFRKI-TQPSVFLWNTM 58
M +L++IHS I GL P R+ + G L + +F + PS WN +
Sbjct: 18 MKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYL 77
Query: 59 IKGYSRIDSHKNGVLMYLDLLKSDVRR-DNYTFPFLFKGFTR--------DIAGSLEKSC 109
I+G+S S N +L Y +L S V R D +TF F K R +I GS+ +S
Sbjct: 78 IRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSG 137
Query: 110 IVMRVFVQNALISTYCLCGEVDMARGIF 137
+ V +L+ Y G V++A +F
Sbjct: 138 FLDDAIVATSLVRCYSANGSVEIASKVF 165
Score = 118 (46.6 bits), Expect = 0.00020, P = 0.00020
Identities = 39/141 (27%), Positives = 59/141 (41%)
Query: 6 QIHSQTIKLGLLTKPHCPKQTRYLLLYE-KGDLKYECKVFRKITQPSVFLWNTMIKGYSR 64
+IH I+ G L T + Y G ++ KVF ++ + WN MI +S
Sbjct: 128 EIHGSVIRSGFLDDAIVA--TSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSH 185
Query: 65 IDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKGFTR----DIAGSLEKSCIVMR----VFV 116
+ H + MY + V D+YT L ++ L + +R VFV
Sbjct: 186 VGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFV 245
Query: 117 QNALISTYCLCGEVDMARGIF 137
NALI Y CG ++ A G+F
Sbjct: 246 SNALIDMYAKCGSLENAIGVF 266
>TAIR|locus:2017744 [details] [associations]
symbol:AT1G22830 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
EMBL:AF000657 EMBL:AC003979 HOGENOM:HOG000115617
ProtClustDB:CLSN2679260 EMBL:AK176394 EMBL:BT023467 IPI:IPI00538128
PIR:B86362 PIR:T00762 RefSeq:NP_001077582.1 RefSeq:NP_173696.1
UniGene:At.41583 ProteinModelPortal:Q4V389 SMR:Q4V389 PRIDE:Q4V389
EnsemblPlants:AT1G22830.1 EnsemblPlants:AT1G22830.2 GeneID:838888
KEGG:ath:AT1G22830 GeneFarm:3637 TAIR:At1g22830 eggNOG:NOG314509
InParanoid:Q4V389 OMA:HEFALME PhylomeDB:Q4V389
Genevestigator:Q4V389 Uniprot:Q4V389
Length = 703
Score = 137 (53.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 51/174 (29%), Positives = 79/174 (45%)
Query: 5 KQIHSQTIKLGL-LTKPHCPKQTRYLLLYEKGDLKYECKVFRKITQPSVFL----WNTMI 59
+Q+H+ I GL PK + Y +L E + IT+ S L WN +I
Sbjct: 103 QQLHAHCISSGLEFDSVLVPKLVTF---YSAFNLLDEAQT---ITENSEILHPLPWNVLI 156
Query: 60 KGYSRIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKG--------FTRDIAGSLEKSCIV 111
Y R + V +Y ++ +R D +T+P + K + R + GS+E S
Sbjct: 157 GSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHR 216
Query: 112 MRVFVQNALISTYCLCGEVDMARGIF-YMSCEDDDGLHELIRIKAVDDDLHELF 164
++V NALIS Y G+VD+AR +F MS D + +I ++ L E F
Sbjct: 217 CNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAF 270
>TAIR|locus:2154389 [details] [associations]
symbol:LPA66 "LOW PSII ACCUMULATION 66" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009451 "RNA modification" evidence=IMP] [GO:0007020
"microtubule nucleation" evidence=RCA] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AB017061
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 GO:GO:0009451
Pfam:PF13041 HOGENOM:HOG000237569 EMBL:AY056318 IPI:IPI00541515
RefSeq:NP_199702.1 UniGene:At.26336 ProteinModelPortal:Q9FI80
SMR:Q9FI80 PaxDb:Q9FI80 PRIDE:Q9FI80 EnsemblPlants:AT5G48910.1
GeneID:834949 KEGG:ath:AT5G48910 GeneFarm:3360 TAIR:At5g48910
eggNOG:NOG255755 InParanoid:Q9FI80 OMA:LELWREM PhylomeDB:Q9FI80
ProtClustDB:CLSN2686787 Genevestigator:Q9FI80 Uniprot:Q9FI80
Length = 646
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 43/160 (26%), Positives = 75/160 (46%)
Query: 1 MHQLKQIHSQTIKLGLLTKPHCPKQT-RYLL---LYEKGDLKYECKVFRKITQPSVFLWN 56
+ L QIH+ IK G + + R+ L+ + DL Y K+F ++ Q + F WN
Sbjct: 36 IRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHR-DLDYAHKIFNQMPQRNCFSWN 94
Query: 57 TMIKGYSRIDSHKN--GVLMYLDLLKSD-VRRDNYTFPFLFKGFTR--------DIAGSL 105
T+I+G+S D K + ++ +++ + V + +TFP + K + I G
Sbjct: 95 TIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLA 154
Query: 106 EKSCIVMRVFVQNALISTYCLCGEVDMARGIFYMSCEDDD 145
K FV + L+ Y +CG + AR +FY + + D
Sbjct: 155 LKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Score = 114 (45.2 bits), Expect = 0.00068, P = 0.00068
Identities = 37/113 (32%), Positives = 54/113 (47%)
Query: 35 GDLKYECKVFRKITQPSVFLWNTMIKGYSRIDSHKNGVLMYLDLLKSDVRRDNYTFPFLF 94
GD K +F K+ Q SV WNTMI GYS K+ V ++ ++ K D+R + T +
Sbjct: 222 GDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVL 281
Query: 95 KGFTRDIAGSLE----------KSCIVMRVFVQNALISTYCLCGEVDMARGIF 137
+R GSLE S I + + +ALI Y CG ++ A +F
Sbjct: 282 PAISR--LGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVF 332
>TAIR|locus:2063771 [details] [associations]
symbol:AT2G03380 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AC006284
HOGENOM:HOG000237570 IPI:IPI00538767 PIR:G84447 RefSeq:NP_178437.1
UniGene:At.52621 ProteinModelPortal:Q9ZQ74 SMR:Q9ZQ74 PaxDb:Q9ZQ74
PRIDE:Q9ZQ74 EnsemblPlants:AT2G03380.1 GeneID:814867
KEGG:ath:AT2G03380 GeneFarm:3664 TAIR:At2g03380 eggNOG:NOG251025
InParanoid:Q9ZQ74 OMA:GAFLHGC PhylomeDB:Q9ZQ74
ProtClustDB:CLSN2683830 Genevestigator:Q9ZQ74 Uniprot:Q9ZQ74
Length = 689
Score = 136 (52.9 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 42/142 (29%), Positives = 70/142 (49%)
Query: 5 KQIHSQTIKLGLLTKPHCPKQTRYLLLYEK-GDLKYECKVFRKITQPSVFLWNTMIKGYS 63
K+IH Q +K+ T L +Y K G++K KVF IT +V W +MI GY
Sbjct: 162 KKIHCQLVKVPSFDNVVL---TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYV 218
Query: 64 RIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKGFTRDIA--------GSLEKSCIVMRVF 115
+ D + G++++ + +++V + YT+ L T+ A G L KS I +
Sbjct: 219 KNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSC 278
Query: 116 VQNALISTYCLCGEVDMARGIF 137
+ +L+ Y CG++ AR +F
Sbjct: 279 LVTSLLDMYVKCGDISNARRVF 300
>TAIR|locus:2098670 [details] [associations]
symbol:AT3G50420 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
UniGene:At.20758 EMBL:AL133363 Pfam:PF13041 IPI:IPI00521058
PIR:T46073 RefSeq:NP_190611.1 UniGene:At.53874
ProteinModelPortal:Q9SCT2 SMR:Q9SCT2 PRIDE:Q9SCT2
EnsemblPlants:AT3G50420.1 GeneID:824206 KEGG:ath:AT3G50420
GeneFarm:4236 TAIR:At3g50420 eggNOG:NOG286613 HOGENOM:HOG000241114
InParanoid:Q9SCT2 OMA:PDLKCWN PhylomeDB:Q9SCT2
ProtClustDB:CLSN2684412 Genevestigator:Q9SCT2 Uniprot:Q9SCT2
Length = 794
Score = 137 (53.3 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 45/143 (31%), Positives = 70/143 (48%)
Query: 7 IHSQTIKLGLLTKPHCPKQTRYLLLYEK-GDLKYECKVFRKITQPSVFLWNTMIKGYSRI 65
++SQ IKLG + QT L +Y GDL+ ++F + WNTMI G +
Sbjct: 221 LNSQIIKLGY--SDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKN 278
Query: 66 DSHKNGVLMYLDLLKSDVRRDNYTFPFLFKGFTRDIAGSLEKSCIVMRVFVQ-------- 117
D ++G++ + ++L S V +T+ + G ++ + SL K I R+ V
Sbjct: 279 DKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGK-LIHARIIVSDSLADLPL 337
Query: 118 -NALISTYCLCGEVDMARGIFYM 139
NAL+ YC CG DM R FY+
Sbjct: 338 DNALLDMYCSCG--DM-REAFYV 357
Score = 37 (18.1 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 7 IHSQTIKLG 15
+HSQ IKLG
Sbjct: 72 LHSQIIKLG 80
>TAIR|locus:2014270 [details] [associations]
symbol:AT1G64310 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AC066689 Pfam:PF13041 IPI:IPI00517625
PIR:A96667 RefSeq:NP_176613.1 UniGene:At.66094
ProteinModelPortal:Q9C7V5 SMR:Q9C7V5 EnsemblPlants:AT1G64310.1
GeneID:842737 KEGG:ath:AT1G64310 GeneFarm:3624 TAIR:At1g64310
eggNOG:NOG241939 HOGENOM:HOG000082882 InParanoid:Q9C7V5 OMA:CVLRACA
PhylomeDB:Q9C7V5 ProtClustDB:CLSN2682638 Genevestigator:Q9C7V5
Uniprot:Q9C7V5
Length = 552
Score = 132 (51.5 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 44/150 (29%), Positives = 73/150 (48%)
Query: 5 KQIHSQTIKLGLLTKPHCPKQ-TRYLLLYEKGDLKYECKVFRKITQPSVFLWNTMIKGYS 63
+++HS K L P+ Q R+ L + DL K+F + SVFLWN++I+ Y+
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALND--DLISARKLFDVFPERSVFLWNSIIRAYA 82
Query: 64 RIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKGFTR--DIAG--SLEKSCIVMRV-FVQ- 117
+ + ++ +L+SD R DN+T+ L +GF+ D G + IV + F Q
Sbjct: 83 KAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQI 142
Query: 118 --NALISTYCLCGEVDMARGIFYMSCEDDD 145
+A++ Y G + A +F S D D
Sbjct: 143 CGSAIVKAYSKAGLIVEASKLF-CSIPDPD 171
>TAIR|locus:2122634 [details] [associations]
symbol:OTP70 "AT4G25270" species:3702 "Arabidopsis
thaliana" [GO:0008380 "RNA splicing" evidence=IMP] [GO:0009451 "RNA
modification" evidence=IMP] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0008380
EMBL:AL161563 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AL035396 Pfam:PF13041 IPI:IPI00521833
PIR:T05548 RefSeq:NP_194257.1 UniGene:At.32276
ProteinModelPortal:Q9SB36 SMR:Q9SB36 EnsemblPlants:AT4G25270.1
GeneID:828630 KEGG:ath:AT4G25270 GeneFarm:4021 TAIR:At4g25270
eggNOG:NOG269307 HOGENOM:HOG000006216 InParanoid:Q9SB36 OMA:EHNFELL
PhylomeDB:Q9SB36 ProtClustDB:CLSN2685667 Genevestigator:Q9SB36
Uniprot:Q9SB36
Length = 527
Score = 131 (51.2 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 31/108 (28%), Positives = 55/108 (50%)
Query: 42 KVFRKITQ--PSVFLWNTMIKGYSRIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKG--- 96
+VF ++++ S F WN++I GY+ + +++ + +Y + + V+ D +TFP + K
Sbjct: 148 EVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGG 207
Query: 97 -----FTRDIAGSLEKSCIVMRVFVQNALISTYCLCGEVDMARGIFYM 139
I L K V+V NAL+ Y CG++ AR +F M
Sbjct: 208 IGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDM 255
>TAIR|locus:2117084 [details] [associations]
symbol:AT4G18840 "AT4G18840" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL021711 EMBL:AL161549
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00520324 PIR:E85212
PIR:T05021 RefSeq:NP_193619.1 UniGene:At.65398
ProteinModelPortal:O49399 SMR:O49399 PRIDE:O49399
EnsemblPlants:AT4G18840.1 GeneID:827618 KEGG:ath:AT4G18840
GeneFarm:4035 TAIR:At4g18840 eggNOG:NOG265885 InParanoid:O49399
OMA:SQGEWVH PhylomeDB:O49399 ProtClustDB:CLSN2685461
Genevestigator:O49399 Uniprot:O49399
Length = 545
Score = 131 (51.2 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 46/178 (25%), Positives = 80/178 (44%)
Query: 3 QLKQIHSQTIKLGLLTKPH-CPKQTRYLLLY-EKGDLKYECKVFRKITQPSVFLWNTMIK 60
+++Q H+ +K GL K + E + Y + +I P+ F N++I+
Sbjct: 54 EIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIR 113
Query: 61 GYSRIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFK------GFT--RDIAGSLEKSCIVM 112
Y+ + + + ++ ++L V D Y+F F+ K GF R I G KS +V
Sbjct: 114 AYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVT 173
Query: 113 RVFVQNALISTYCLCGEVDMARGIF-YMSCEDDDGLHELIRI---KAVDDDLHELFPE 166
VFV+N L++ Y G ++AR + M D + L+ K + D+ LF E
Sbjct: 174 DVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDE 231
>TAIR|locus:2195980 [details] [associations]
symbol:AT1G77170 "AT1G77170" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC004260 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237569 IPI:IPI00518933 RefSeq:NP_177842.1
UniGene:At.21362 ProteinModelPortal:Q3ECB8 PaxDb:Q3ECB8
EnsemblPlants:AT1G77170.1 GeneID:844054 KEGG:ath:AT1G77170
GeneFarm:3631 TAIR:At1g77170 eggNOG:NOG311468 InParanoid:Q3ECB8
OMA:LEPWNDG PhylomeDB:Q3ECB8 ProtClustDB:CLSN2682973
Genevestigator:Q3ECB8 Uniprot:Q3ECB8
Length = 467
Score = 126 (49.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 36/144 (25%), Positives = 71/144 (49%)
Query: 5 KQIHSQTIKLGLLTKPHCPKQTRYLLLYEK-GDLKYECKVFRKITQPSVFLWNTMIKGYS 63
K++HS ++LG + C ++ ++ LY K G+ + KVF + + + WN +I G +
Sbjct: 137 KELHSVAVRLGFVGDEFC--ESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLN 194
Query: 64 RIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFK--GFTRDIAGSLE-KSCIVMR------- 113
V M++D+ +S + D++T + G D++ + + C++
Sbjct: 195 HAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSD 254
Query: 114 VFVQNALISTYCLCGEVDMARGIF 137
+ + N+LI Y CG +D+A IF
Sbjct: 255 IMMLNSLIDMYGKCGRMDLASHIF 278
Score = 125 (49.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 28/96 (29%), Positives = 49/96 (51%)
Query: 50 PSVFLWNTMIKGYSRIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKGFTR--DIAGSLEK 107
P FLWN +++ Y R +S + + +YL +++S V D Y+ P + K + D E
Sbjct: 80 PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKEL 139
Query: 108 SCIVMRV------FVQNALISTYCLCGEVDMARGIF 137
+ +R+ F ++ I+ YC GE + AR +F
Sbjct: 140 HSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVF 175
>TAIR|locus:2091546 [details] [associations]
symbol:AT3G13770 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AP001307 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00518949 RefSeq:NP_187990.1
UniGene:At.43032 UniGene:At.53299 ProteinModelPortal:Q9LIC3
SMR:Q9LIC3 EnsemblPlants:AT3G13770.1 GeneID:820586
KEGG:ath:AT3G13770 GeneFarm:3533 TAIR:At3g13770 eggNOG:NOG263023
InParanoid:Q9LIC3 OMA:NEFTFAT PhylomeDB:Q9LIC3
ProtClustDB:CLSN2684809 Genevestigator:Q9LIC3 Uniprot:Q9LIC3
Length = 628
Score = 127 (49.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 39/149 (26%), Positives = 70/149 (46%)
Query: 5 KQIHSQTIKLGLLTKPHCPKQTRYLLLYEKGD-LKYECKVFRKITQPSVFLWNTMIKGYS 63
+++H+ IK L P +TR L+ Y K D L+ KV ++ + +V W MI YS
Sbjct: 72 QRVHAHMIKTRYL--PATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYS 129
Query: 64 RIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFK--------GFTRDIAGSLEKSCIVMRVF 115
+ + ++ ++++SD + + +TF + G + I G + K +F
Sbjct: 130 QTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIF 189
Query: 116 VQNALISTYCLCGEVDMARGIFYMSCEDD 144
V ++L+ Y G++ AR IF E D
Sbjct: 190 VGSSLLDMYAKAGQIKEAREIFECLPERD 218
>TAIR|locus:2095487 [details] [associations]
symbol:AT3G28660 "AT3G28660" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041 HOGENOM:HOG000237569
EMBL:AP000420 EMBL:AY091065 EMBL:BT000982 IPI:IPI00548848
RefSeq:NP_189507.2 UniGene:At.42756 ProteinModelPortal:Q9LJI9
SMR:Q9LJI9 EnsemblPlants:AT3G28660.1 GeneID:822496
KEGG:ath:AT3G28660 GeneFarm:3695 TAIR:At3g28660 eggNOG:NOG252175
InParanoid:Q9LJI9 PhylomeDB:Q9LJI9 ProtClustDB:CLSN2685236
Genevestigator:Q9LJI9 Uniprot:Q9LJI9
Length = 504
Score = 125 (49.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 41/146 (28%), Positives = 67/146 (45%)
Query: 5 KQIHSQTIKLGL-LTKPHCPKQTRYLLLYEKGDLKYEC-KVFRKITQPSVFLWNTMIKGY 62
KQIH +K G+ L+ H QT L +Y + L ++ KVF +I QP V W+ ++ GY
Sbjct: 136 KQIHCWVVKNGVFLSDGHV--QTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGY 193
Query: 63 SRIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKGFTRDIAGSL-----------EKSCIV 111
R G+ ++ ++L + D ++ + G+L +K I
Sbjct: 194 VRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQ--VGALAQGKWIHEFVKKKRWIE 251
Query: 112 MRVFVQNALISTYCLCGEVDMARGIF 137
VFV AL+ Y CG ++ A +F
Sbjct: 252 SDVFVGTALVDMYAKCGCIETAVEVF 277
>TAIR|locus:2054789 [details] [associations]
symbol:MEF21 "mitochondrial editing factor 21"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0080156 "mitochondrial mRNA modification"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
EMBL:AC007109 Pfam:PF13041 GO:GO:0080156 HOGENOM:HOG000237569
EMBL:DQ056537 IPI:IPI00521897 PIR:E84590 RefSeq:NP_179644.1
UniGene:At.50086 ProteinModelPortal:Q9SIL5 SMR:Q9SIL5
EnsemblPlants:AT2G20540.1 GeneID:816576 KEGG:ath:AT2G20540
GeneFarm:3690 TAIR:At2g20540 eggNOG:NOG269713 InParanoid:Q9SIL5
OMA:ICNALME PhylomeDB:Q9SIL5 ProtClustDB:CLSN2683323
Genevestigator:Q9SIL5 Uniprot:Q9SIL5
Length = 534
Score = 125 (49.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 35/118 (29%), Positives = 59/118 (50%)
Query: 36 DLKYECKVFRKITQPSVFLWNTMIKGYSRIDSHKNGVLMYLDLL-KSDVRRDNYTFPFLF 94
D+ Y ++F +++ P+VFL+N++I+ Y+ + + + +Y LL KS D +TFPF+F
Sbjct: 57 DMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMF 116
Query: 95 KGFT--------RDIAGSLEKSCIVMRVFVQNALISTYCLCGEVDMARGIFYMSCEDD 144
K + + G L K V +NALI Y ++ A +F E D
Sbjct: 117 KSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERD 174
>TAIR|locus:2049726 [details] [associations]
symbol:AT2G37310 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002685 GenomeReviews:CT485783_GR
EMBL:AC005896 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:AK230376
IPI:IPI00523165 PIR:B84791 RefSeq:NP_181268.1 UniGene:At.51341
ProteinModelPortal:Q9ZUT5 SMR:Q9ZUT5 PRIDE:Q9ZUT5
EnsemblPlants:AT2G37310.1 GeneID:818308 KEGG:ath:AT2G37310
GeneFarm:3673 TAIR:At2g37310 eggNOG:NOG272931 HOGENOM:HOG000090695
InParanoid:Q9ZUT5 OMA:AYGHLIQ PhylomeDB:Q9ZUT5
ProtClustDB:CLSN2683974 Genevestigator:Q9ZUT5 Uniprot:Q9ZUT5
Length = 657
Score = 125 (49.1 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 40/123 (32%), Positives = 64/123 (52%)
Query: 32 YEKGD-LKYECKVFRKITQPSVFLWNTMIKGYSRIDSHKNGVLMYLDLLK-SDVRRDNYT 89
Y K D ++ KVF ++++ V WN+MI GYS+ S ++ MY +L SD + + T
Sbjct: 177 YTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVT 236
Query: 90 FPFLFK--GFTRDIAGSLE------KSCIVMRVFVQNALISTYCLCGEVDMARGIFYMSC 141
+F+ G + D+ LE ++ I M + + NA+I Y CG +D AR +F
Sbjct: 237 VISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMS 296
Query: 142 EDD 144
E D
Sbjct: 297 EKD 299
>TAIR|locus:2151694 [details] [associations]
symbol:AT5G37570 "AT5G37570" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AB018107 Pfam:PF13041
HOGENOM:HOG000237569 IPI:IPI00533371 RefSeq:NP_198573.1
UniGene:At.65593 ProteinModelPortal:Q9FHR3 SMR:Q9FHR3
EnsemblPlants:AT5G37570.1 GeneID:833735 KEGG:ath:AT5G37570
GeneFarm:4038 TAIR:At5g37570 eggNOG:NOG280404 InParanoid:Q9FHR3
OMA:LIDMNAK PhylomeDB:Q9FHR3 ProtClustDB:CLSN2686926
Genevestigator:Q9FHR3 Uniprot:Q9FHR3
Length = 550
Score = 124 (48.7 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 38/143 (26%), Positives = 67/143 (46%)
Query: 4 LKQIHSQTIKLGLLTKPHCPKQTRYLLLYEKGDLKYECKVFRKITQPSVFLWNTMIKGYS 63
L QIH++ I+ GL + L Y VF ++ P +LWN +IKGYS
Sbjct: 26 LNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHLIKGYS 85
Query: 64 RIDSHKNGVLMYLDLLKSDVRR-DNYTFPFLFKGFTRDIAGSLEKSC--IVMRV-FVQNA 119
V + + ++++ + R D YTFP + K + + + S +V+R+ F ++
Sbjct: 86 NKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDV 145
Query: 120 LIST-----YCLCGEVDMARGIF 137
++ T Y C ++ AR +F
Sbjct: 146 VVGTSFVDFYGKCKDLFSARKVF 168
>TAIR|locus:2162207 [details] [associations]
symbol:CRR21 "chlororespiratory reduction 21"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016556 "mRNA modification" evidence=RCA;IMP]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0030154 "cell
differentiation" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 GO:GO:0016556 Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AB009050 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
IPI:IPI00527368 RefSeq:NP_200385.1 UniGene:At.65685
ProteinModelPortal:Q9FM64 SMR:Q9FM64 STRING:Q9FM64 PRIDE:Q9FM64
EnsemblPlants:AT5G55740.1 GeneID:835668 KEGG:ath:AT5G55740
GeneFarm:4044 TAIR:At5g55740 eggNOG:NOG265492 HOGENOM:HOG000238049
InParanoid:Q9FM64 OMA:FYCKVGL PhylomeDB:Q9FM64
ProtClustDB:CLSN2687002 Genevestigator:Q9FM64 Uniprot:Q9FM64
Length = 830
Score = 126 (49.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 39/142 (27%), Positives = 72/142 (50%)
Query: 5 KQIHSQTIKLGLLTKPHCPKQTRYLLLYEKGD-LKYECKVFRKITQPSVFLWNTMIKGYS 63
KQIH++ +K G + +T+ ++ Y K D L+ +F K+ +VF W +I
Sbjct: 90 KQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKC 149
Query: 64 RIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKG--------FTRDIAGSLEKSCIVMRVF 115
RI + ++ ++++L++++ DN+ P + K F R + G + KS + VF
Sbjct: 150 RIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVF 209
Query: 116 VQNALISTYCLCGEVDMARGIF 137
V ++L Y CG +D A +F
Sbjct: 210 VASSLADMYGKCGVLDDASKVF 231
>TAIR|locus:2144143 [details] [associations]
symbol:AT5G06540 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AP002543 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854 HOGENOM:HOG000237569
IPI:IPI00525372 RefSeq:NP_196272.1 UniGene:At.65494
ProteinModelPortal:Q9FG16 SMR:Q9FG16 PRIDE:Q9FG16
EnsemblPlants:AT5G06540.1 GeneID:830542 KEGG:ath:AT5G06540
GeneFarm:3536 TAIR:At5g06540 eggNOG:NOG262142 InParanoid:Q9FG16
OMA:SIMINGY PhylomeDB:Q9FG16 ProtClustDB:CLSN2686880
ArrayExpress:Q9FG16 Genevestigator:Q9FG16 Uniprot:Q9FG16
Length = 622
Score = 124 (48.7 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 35/109 (32%), Positives = 53/109 (48%)
Query: 37 LKYECKVFRKITQPSVFLWNTMIKGYSRIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKG 96
L Y +F +I P++F++N +I+ +S Y +LKS + DN TFPFL K
Sbjct: 67 LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKA 126
Query: 97 FTRD---IAGSLEKSCIVM-----RVFVQNALISTYCLCGEVDMARGIF 137
+ + G S IV V+V+N+L+ Y CG + A IF
Sbjct: 127 SSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIF 175
>TAIR|locus:2170877 [details] [associations]
symbol:AT5G43790 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR PROSITE:PS51375 EMBL:AB026651
Pfam:PF01535 TIGRFAMs:TIGR00756 HOGENOM:HOG000237569 EMBL:AY124001
IPI:IPI00535786 RefSeq:NP_199192.1 UniGene:At.9039
ProteinModelPortal:Q9FG85 SMR:Q9FG85 EnsemblPlants:AT5G43790.1
GeneID:834401 KEGG:ath:AT5G43790 GeneFarm:4042 TAIR:At5g43790
eggNOG:NOG254263 InParanoid:Q9FG85 OMA:YPSLFKA PhylomeDB:Q9FG85
ProtClustDB:CLSN2916499 Genevestigator:Q9FG85 Uniprot:Q9FG85
Length = 460
Score = 122 (48.0 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 38/107 (35%), Positives = 55/107 (51%)
Query: 1 MHQLKQIHSQTIKLGLLTKPHCPKQTRYLLLYEKGDLKYECKVFRKITQPSVFLWNTMIK 60
+ LKQIH+Q I +GL H ++ L L L Y + R+I PSVFL+NT+I
Sbjct: 22 LQNLKQIHAQIITIGL--SHHTYPLSKLLHLSSTVCLSYALSILRQIPNPSVFLYNTLIS 79
Query: 61 GYSRIDSHKN-----GVLMYLDLLKSD---VRRDNYTFPFLFK--GF 97
S + +H + +Y +L S VR + +T+P LFK GF
Sbjct: 80 --SIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGF 124
>TAIR|locus:2148101 [details] [associations]
symbol:AT5G16860 "AT5G16860" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AL391141
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00533068 PIR:T51541
RefSeq:NP_197188.1 UniGene:At.54872 ProteinModelPortal:Q9LFL5
SMR:Q9LFL5 EnsemblPlants:AT5G16860.1 GeneID:831549
KEGG:ath:AT5G16860 GeneFarm:3540 TAIR:At5g16860 eggNOG:NOG251129
InParanoid:Q9LFL5 OMA:FTISCAL PhylomeDB:Q9LFL5
ProtClustDB:CLSN2686178 Genevestigator:Q9LFL5 Uniprot:Q9LFL5
Length = 850
Score = 125 (49.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 45/148 (30%), Positives = 70/148 (47%)
Query: 3 QLKQIHSQTIKLGLLTKPHCPKQTRYLL-LY-EKGDLKYECKVFRKI--TQPSVFLWNTM 58
Q+K IH + + G+LT T +L+ Y G L + + R+ + V+ WN++
Sbjct: 43 QVKLIHQKLLSFGILTL----NLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSL 98
Query: 59 IKGYSRIDSHKNGVLMYLDLLKS-DVRRDNYTFPFLFK--GFTRDI-----AGSLEK-SC 109
I+ Y + N L L+ S DNYTFPF+FK G + A +L +
Sbjct: 99 IRSYGD-NGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG 157
Query: 110 IVMRVFVQNALISTYCLCGEVDMARGIF 137
+ VFV NAL++ Y C + AR +F
Sbjct: 158 FISNVFVGNALVAMYSRCRSLSDARKVF 185
>TAIR|locus:2196583 [details] [associations]
symbol:ECB2 "EARLY CHLOROPLAST BIOGENESIS2" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009451 "RNA modification" evidence=IMP] [GO:0009658
"chloroplast organization" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0009416 "response to light stimulus"
evidence=IEP] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0040007 GO:GO:0009507 GO:GO:0009658
EMBL:AC013453 GO:GO:0009416 Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 GO:GO:0009451
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00522462 PIR:H86288
RefSeq:NP_173004.1 UniGene:At.41931 ProteinModelPortal:Q9M9E2
SMR:Q9M9E2 PRIDE:Q9M9E2 EnsemblPlants:AT1G15510.1 GeneID:838121
KEGG:ath:AT1G15510 GeneFarm:3519 TAIR:At1g15510 eggNOG:NOG295763
InParanoid:Q9M9E2 OMA:FCGHSER PhylomeDB:Q9M9E2 ProtClustDB:PLN03077
ArrayExpress:Q9M9E2 Genevestigator:Q9M9E2 Uniprot:Q9M9E2
Length = 866
Score = 125 (49.1 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 37/120 (30%), Positives = 63/120 (52%)
Query: 28 YLLLYEK-GDLKYECKVFRKITQPSVFLWNTMIKGYSRIDSHKNGVLMYLDLL-KSDVRR 85
+L ++ + G+L VF K+++ ++F WN ++ GY++ + +Y +L V+
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKP 194
Query: 86 DNYTFPFLFK--GFTRDIAGSLEKSCIVMR------VFVQNALISTYCLCGEVDMARGIF 137
D YTFP + + G D+A E V+R + V NALI+ Y CG+V AR +F
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254
>TAIR|locus:2175653 [details] [associations]
symbol:AT5G39350 "AT5G39350" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AB009054 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00525121 RefSeq:NP_198751.1
UniGene:At.55251 ProteinModelPortal:Q9FLZ9 SMR:Q9FLZ9
EnsemblPlants:AT5G39350.1 GeneID:833931 KEGG:ath:AT5G39350
GeneFarm:4040 TAIR:At5g39350 eggNOG:NOG328150 InParanoid:Q9FLZ9
OMA:LLAMYMN PhylomeDB:Q9FLZ9 ProtClustDB:CLSN2687317
Genevestigator:Q9FLZ9 Uniprot:Q9FLZ9
Length = 677
Score = 123 (48.4 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 32/113 (28%), Positives = 61/113 (53%)
Query: 35 GDLKYECKVFRKITQPSVFLWNTMIKGYSRIDSHKNGVLMYLDLLKSDVR--RDNYTFPF 92
G + Y K+F ++ Q S+ +N +I+ Y R + + + +++ ++ V+ D YT+PF
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122
Query: 93 LFK--GFTRD------IAGSLEKSCIVMRVFVQNALISTYCLCGEVDMARGIF 137
+ K G + + G + +S +VQNAL++ Y G+V+MAR +F
Sbjct: 123 VAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVF 175
Score = 115 (45.5 bits), Expect = 0.00056, P = 0.00056
Identities = 37/123 (30%), Positives = 59/123 (47%)
Query: 25 QTRYLLLYEK-GDLKYECKVFRKITQPSVFLWNTMIKGYSRIDSHKNGVLMYLD-LLKSD 82
Q L +Y G ++ VF + V WNTMI GY R + + N LM D ++
Sbjct: 155 QNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYR-NGYMNDALMMFDWMVNES 213
Query: 83 VRRDNYTFPFLFK--GFTRDIA-GS-----LEKSCIVMRVFVQNALISTYCLCGEVDMAR 134
V D+ T + G +D+ G +E+ + ++ V+NAL++ Y CG +D AR
Sbjct: 214 VDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEAR 273
Query: 135 GIF 137
+F
Sbjct: 274 FVF 276
>TAIR|locus:2168963 [details] [associations]
symbol:AT5G47460 "AT5G47460" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB025628 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 IPI:IPI00516266
RefSeq:NP_199557.1 UniGene:At.29890 UniGene:At.66689
ProteinModelPortal:Q9FGL1 SMR:Q9FGL1 PaxDb:Q9FGL1 PRIDE:Q9FGL1
EnsemblPlants:AT5G47460.1 GeneID:834796 KEGG:ath:AT5G47460
GeneFarm:4043 TAIR:At5g47460 eggNOG:NOG299819 HOGENOM:HOG000115646
InParanoid:Q9FGL1 OMA:PNSSSWN PhylomeDB:Q9FGL1
ProtClustDB:CLSN2686376 Genevestigator:Q9FGL1 Uniprot:Q9FGL1
Length = 576
Score = 122 (48.0 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 40/150 (26%), Positives = 66/150 (44%)
Query: 5 KQIHSQTIKLGLLTKPHCPKQTRYLLLYEKGD-LKYECKVFRKITQPSVFLWNTMIKGYS 63
+Q+H K G ++ + Y+ D L+ KVF ++ P V WN+++ GY
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSL--MRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYV 132
Query: 64 RIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKGFTR---DIAGSLEKSCIVM------RV 114
+ + G+ ++L+L +SDV + ++F R G+ S +V V
Sbjct: 133 QSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNV 192
Query: 115 FVQNALISTYCLCGEVDMARGIFYMSCEDD 144
V N LI Y CG +D A +F E D
Sbjct: 193 VVGNCLIDMYGKCGFMDDAVLVFQHMEEKD 222
>TAIR|locus:2130644 [details] [associations]
symbol:AT4G15720 "AT4G15720" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:Z97339 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AL161542
HOGENOM:HOG000237570 EMBL:AY072074 EMBL:AY096603 IPI:IPI00537442
PIR:D71422 RefSeq:NP_193307.2 UniGene:At.33147 UniGene:At.48860
ProteinModelPortal:Q8VYH0 SMR:Q8VYH0 PRIDE:Q8VYH0
EnsemblPlants:AT4G15720.1 GeneID:827250 KEGG:ath:AT4G15720
GeneFarm:3138 TAIR:At4g15720 eggNOG:NOG266566 InParanoid:Q8VYH0
OMA:DCHEAFK PhylomeDB:Q8VYH0 ProtClustDB:CLSN2690297
Genevestigator:Q8VYH0 Uniprot:Q8VYH0
Length = 616
Score = 122 (48.0 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 35/141 (24%), Positives = 70/141 (49%)
Query: 7 IHSQTIKLGLLTKPHCPKQTRYLLLYEK-GDLKYECKVFRKITQPSVFLWNTMIKGYSRI 65
+H+ T+KLG + ++ Y K ++ K+F ++ +P+V W ++I GY+ +
Sbjct: 51 LHTLTLKLGFASDTFTVNHL--VISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDM 108
Query: 66 DSHKNGVLMYLDLLKS-DVRRDNYTFPFLFKGFT--------RDIAGSLEKSCIVMRVFV 116
+N + M+ + + V + YTF +FK + ++I LE S + + V
Sbjct: 109 GKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVV 168
Query: 117 QNALISTYCLCGEVDMARGIF 137
++L+ Y C +V+ AR +F
Sbjct: 169 SSSLVDMYGKCNDVETARRVF 189
>TAIR|locus:2089333 [details] [associations]
symbol:AT3G16610 "AT3G16610" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0006302 "double-strand break repair" evidence=RCA]
[GO:0006312 "mitotic recombination" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007129 "synapsis"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR PROSITE:PS51375 EMBL:AB022217
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00549054 RefSeq:NP_188283.1 UniGene:At.38870
UniGene:At.66463 ProteinModelPortal:Q9LUS3 SMR:Q9LUS3 PaxDb:Q9LUS3
PRIDE:Q9LUS3 EnsemblPlants:AT3G16610.1 GeneID:820912
KEGG:ath:AT3G16610 GeneFarm:4237 TAIR:At3g16610 eggNOG:NOG326174
InParanoid:Q9LUS3 OMA:KNEVTWS PhylomeDB:Q9LUS3
ProtClustDB:CLSN2913360 Genevestigator:Q9LUS3 Uniprot:Q9LUS3
Length = 654
Score = 122 (48.0 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 42/142 (29%), Positives = 63/142 (44%)
Query: 7 IHSQTIKLGLLTKPHCPKQTRYLLLYEK-GDLKYECKVFRKITQPSV--FLWNTMIKGYS 63
IH +K L T LY +++ VF +I P + W+ MI+ Y+
Sbjct: 21 IHQHLLKRSL-TLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYA 79
Query: 64 RIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKGFT--RDIA-GSLEKS---C--IVMRVF 115
D + + +Y +L S VR YT+PF+ K R I G L S C ++
Sbjct: 80 SNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMY 139
Query: 116 VQNALISTYCLCGEVDMARGIF 137
V AL+ Y CGE++MA +F
Sbjct: 140 VCTALVDFYAKCGELEMAIKVF 161
>TAIR|locus:2131631 [details] [associations]
symbol:AT4G35130 "AT4G35130" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:1.25.40.10 EMBL:AL022023 EMBL:AL161586 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00533040 PIR:T05783 RefSeq:NP_195239.1 UniGene:At.65456
ProteinModelPortal:O49619 SMR:O49619 PRIDE:O49619
EnsemblPlants:AT4G35130.1 GeneID:829665 KEGG:ath:AT4G35130
GeneFarm:3322 TAIR:At4g35130 eggNOG:NOG324832 InParanoid:O49619
OMA:HDNTGCY PhylomeDB:O49619 ProtClustDB:CLSN2685935
Genevestigator:O49619 Uniprot:O49619
Length = 804
Score = 123 (48.4 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 38/162 (23%), Positives = 76/162 (46%)
Query: 5 KQIHSQTIKLGLLTKPHCPKQTRYLLLY-EKGDLKYECKVFRKITQPSVFLWNTMIKGYS 63
+ IH ++ G L PH +T + +Y E G LK +F ++ + +V WN++I Y
Sbjct: 350 RTIHGYAMRRGFL--PHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYV 407
Query: 64 RIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKGFT--------RDIAGSLEKSCIVMRVF 115
+ + + + ++ +L S + D+ T + + R+I + KS
Sbjct: 408 QNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTI 467
Query: 116 VQNALISTYCLCGEVDMARGIF-YMSCEDDDGLHELIRIKAV 156
+ N+L+ Y +CG+++ AR F ++ +D + +I AV
Sbjct: 468 ILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAV 509
Score = 116 (45.9 bits), Expect = 0.00053, P = 0.00052
Identities = 38/131 (29%), Positives = 61/131 (46%)
Query: 23 PKQTRYLLLYEKGDLKYEC-KVFRKITQPSVFLWNTMIKGYSRIDSHKNGVLMYLDLLKS 81
P TR L + L + ++F ++ + FLWN MIKG++ + V Y ++ +
Sbjct: 65 PALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFA 124
Query: 82 DVRRDNYTFPFLFK---GFT-----RDIAGSLEKSCIVMRVFVQNALISTYCLCGEVDMA 133
V+ D +T+PF+ K G + + I + K V V+V N+LIS Y G A
Sbjct: 125 GVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDA 184
Query: 134 RGIFYMSCEDD 144
+F E D
Sbjct: 185 EKVFEEMPERD 195
>TAIR|locus:2096414 [details] [associations]
symbol:AT3G03580 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC009327 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
EMBL:BT004278 EMBL:BT006153 IPI:IPI00535817 RefSeq:NP_187008.1
UniGene:At.40958 ProteinModelPortal:Q9SS60 SMR:Q9SS60 PaxDb:Q9SS60
PRIDE:Q9SS60 EnsemblPlants:AT3G03580.1 GeneID:821229
KEGG:ath:AT3G03580 GeneFarm:3232 TAIR:At3g03580 eggNOG:NOG261100
InParanoid:Q9SS60 OMA:YTFPSVI PhylomeDB:Q9SS60
ProtClustDB:CLSN2684094 Genevestigator:Q9SS60 Uniprot:Q9SS60
Length = 882
Score = 123 (48.4 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 40/148 (27%), Positives = 71/148 (47%)
Query: 1 MHQLKQIHSQTIKLGLLTKPHCPKQT--RYLLLYEKGDLKYECKVFRKITQP-SVFLWNT 57
+++L++IH+ I LGL + + +Y E VFR+++ +V+LWN+
Sbjct: 20 LNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPAS---SLSVFRRVSPAKNVYLWNS 76
Query: 58 MIKGYSRIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKG----FTRDIAGSLEKSCIVMR 113
+I+ +S+ + Y L +S V D YTFP + K F ++ + + + M
Sbjct: 77 IIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMG 136
Query: 114 ----VFVQNALISTYCLCGEVDMARGIF 137
+FV NAL+ Y G + AR +F
Sbjct: 137 FESDLFVGNALVDMYSRMGLLTRARQVF 164
>TAIR|locus:2167593 [details] [associations]
symbol:AT5G44230 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AB005239 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569 EMBL:DQ447037
IPI:IPI00540587 RefSeq:NP_199236.1 UniGene:At.55349
ProteinModelPortal:Q9FFG8 SMR:Q9FFG8 EnsemblPlants:AT5G44230.1
GeneID:834446 KEGG:ath:AT5G44230 GeneFarm:3182 TAIR:At5g44230
eggNOG:NOG302114 InParanoid:Q9FFG8 OMA:VISWTEL PhylomeDB:Q9FFG8
ProtClustDB:CLSN2687233 Genevestigator:Q9FFG8 Uniprot:Q9FFG8
Length = 657
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 39/148 (26%), Positives = 66/148 (44%)
Query: 1 MHQLKQIHSQTIKLGLLTKPHCPKQTRYLLLYEKGDLK---YECKVFRKITQPSVFLWNT 57
++Q+KQIH ++ GL C T+ + K + Y +V + + FLW
Sbjct: 62 LNQIKQIHGHVLRKGL--DQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTA 119
Query: 58 MIKGYSRIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFK--GFTRDI-AG-SLEKSCIVMR 113
+I+GY+ + MY + K ++ ++TF L K G +D+ G +R
Sbjct: 120 VIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLR 179
Query: 114 ----VFVQNALISTYCLCGEVDMARGIF 137
V+V N +I Y C +D AR +F
Sbjct: 180 GFCFVYVGNTMIDMYVKCESIDCARKVF 207
>TAIR|locus:2038603 [details] [associations]
symbol:AT2G27610 "AT2G27610" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC006232 EMBL:AC005824 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00547006 PIR:G84674
RefSeq:NP_180329.1 UniGene:At.13265 UniGene:At.66363
ProteinModelPortal:Q9ZUW3 SMR:Q9ZUW3 PRIDE:Q9ZUW3
EnsemblPlants:AT2G27610.1 GeneID:817307 KEGG:ath:AT2G27610
GeneFarm:3453 TAIR:At2g27610 eggNOG:NOG320969 InParanoid:Q9ZUW3
OMA:IVAWSAM PhylomeDB:Q9ZUW3 ProtClustDB:CLSN2683516
Genevestigator:Q9ZUW3 Uniprot:Q9ZUW3
Length = 868
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 38/142 (26%), Positives = 67/142 (47%)
Query: 5 KQIHSQTIKLGLLTKPHCPKQTRYLLLYEKG-DLKYECKVFRKITQPSVFLWNTMIKGYS 63
+Q+H Q IK G L T + Y KG + K KVF ++ + +V W T+I GY+
Sbjct: 113 RQLHCQCIKFGFLDDVSVG--TSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYA 170
Query: 64 RIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKGFTRDIAGS--LEKSCIVMR------VF 115
R + + +++ + + +++TF + G L+ +V++ +
Sbjct: 171 RNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIP 230
Query: 116 VQNALISTYCLCGEVDMARGIF 137
V N+LI+ Y CG V AR +F
Sbjct: 231 VSNSLINLYLKCGNVRKARILF 252
>TAIR|locus:2141171 [details] [associations]
symbol:AT4G21300 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161554 Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL021960
EMBL:AL031187 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00535848 PIR:T05172 RefSeq:NP_193861.1
UniGene:At.66596 ProteinModelPortal:Q9STE1 SMR:Q9STE1 PRIDE:Q9STE1
EnsemblPlants:AT4G21300.1 GeneID:827878 KEGG:ath:AT4G21300
GeneFarm:3874 TAIR:At4g21300 eggNOG:NOG315457 InParanoid:Q9STE1
OMA:ISGYVLN PhylomeDB:Q9STE1 ProtClustDB:CLSN2685364
Genevestigator:Q9STE1 Uniprot:Q9STE1
Length = 857
Score = 120 (47.3 bits), Expect = 0.00020, P = 0.00020
Identities = 35/126 (27%), Positives = 57/126 (45%)
Query: 29 LLLYEK-GDLKYECKVFRKITQPSVFLWNTMIKGYSRIDSHKNGVLMYLDLLKSDVRRDN 87
L +Y K G K+FR +++ WN MI GY + + + + +++ S V D
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDA 340
Query: 88 YTFPFLFKGFTR--DIAGSLEKSCIVMR------VFVQNALISTYCLCGEVDMARGIFYM 139
TF L ++ ++ + C +MR +F+ +ALI Y C V MA+ IF
Sbjct: 341 ITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIF-S 399
Query: 140 SCEDDD 145
C D
Sbjct: 400 QCNSVD 405
>TAIR|locus:2087969 [details] [associations]
symbol:AT3G13880 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
EMBL:AB028610 Pfam:PF13041 HOGENOM:HOG000237570 EMBL:BX824350
IPI:IPI00540943 RefSeq:NP_188004.1 UniGene:At.50181
ProteinModelPortal:Q9LRV9 SMR:Q9LRV9 PRIDE:Q9LRV9
EnsemblPlants:AT3G13880.1 GeneID:820601 KEGG:ath:AT3G13880
GeneFarm:3843 TAIR:At3g13880 eggNOG:NOG298605 InParanoid:Q9LRV9
OMA:MNACASL PhylomeDB:Q9LRV9 ProtClustDB:CLSN2722886
Genevestigator:Q9LRV9 Uniprot:Q9LRV9
Length = 748
Score = 119 (46.9 bits), Expect = 0.00022, P = 0.00022
Identities = 43/174 (24%), Positives = 88/174 (50%)
Query: 5 KQIHSQTIKLGLLTKPHCPKQTRYLLLYEK-GDLKYECKVFRKITQPSVFLWNTMIKGYS 63
K H IK L P L +Y K +L + ++F ++ + ++ +N++I GY+
Sbjct: 67 KLAHGHMIKSSL--NPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYT 124
Query: 64 RIDSHKNGVLMYLDLLKSDVRRDNYTFPFL--FKGFTRDI-AGSLEKSCIVM-----RVF 115
++ ++ + ++L+ +++++ D +T+ F G D+ G L +V+ +VF
Sbjct: 125 QMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVF 184
Query: 116 VQNALISTYCLCGEVDMARGIFYMSCEDDDGL--HELI----RIKAVDDDLHEL 163
+ N LI Y CG++D A +F C++ D + + LI R+ A ++ L+ L
Sbjct: 185 LINVLIDMYSKCGKLDQAMSLFDR-CDERDQVSWNSLISGYVRVGAAEEPLNLL 237
>TAIR|locus:2077878 [details] [associations]
symbol:AT3G08820 "AT3G08820" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 EMBL:AC012562
PROSITE:PS51375 EMBL:AC010871 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00518512
RefSeq:NP_187494.1 UniGene:At.65071 ProteinModelPortal:Q9SR82
SMR:Q9SR82 PaxDb:Q9SR82 PRIDE:Q9SR82 EnsemblPlants:AT3G08820.1
GeneID:820029 KEGG:ath:AT3G08820 GeneFarm:3532 TAIR:At3g08820
eggNOG:NOG303126 InParanoid:Q9SR82 OMA:LIALEPW PhylomeDB:Q9SR82
ProtClustDB:CLSN2684962 Genevestigator:Q9SR82 Uniprot:Q9SR82
Length = 685
Score = 117 (46.2 bits), Expect = 0.00033, P = 0.00033
Identities = 35/147 (23%), Positives = 64/147 (43%)
Query: 7 IHSQTIKLGLLTKPHCPKQTRYLLLYE-KGDLKYECKVFRKITQPSVFLWNTMIKGYSRI 65
+HS +K G T L +Y G L K+F +I SV W + GY+
Sbjct: 133 LHSLVVKCGF--NHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTS 190
Query: 66 DSHKNGVLMYLDLLKSDVRRDNYTFPFLFKGFTR--DI-AGS-----LEKSCIVMRVFVQ 117
H+ + ++ +++ V+ D+Y + D+ +G +E+ + FV+
Sbjct: 191 GRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVR 250
Query: 118 NALISTYCLCGEVDMARGIFYMSCEDD 144
L++ Y CG+++ AR +F E D
Sbjct: 251 TTLVNLYAKCGKMEKARSVFDSMVEKD 277
Score = 115 (45.5 bits), Expect = 0.00056, P = 0.00056
Identities = 36/120 (30%), Positives = 63/120 (52%)
Query: 25 QTRYLLLYEK-GDLKYECKVFRKITQPSVFLWNTMIKGYSRIDSHKNGVLMYLDLLKSDV 83
+T + LY K G ++ VF + + + W+TMI+GY+ K G+ ++L +L+ ++
Sbjct: 250 RTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENL 309
Query: 84 RRDNYTFP-FLFKGFTR---DIA--G-SL-EKSCIVMRVFVQNALISTYCLCGEVDMARG 135
+ D ++ FL + D+ G SL ++ + +F+ NALI Y CG MARG
Sbjct: 310 KPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGA--MARG 367
>TAIR|locus:2181201 [details] [associations]
symbol:AT5G27110 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:1.25.40.10 EMBL:AF007271 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 HOGENOM:HOG000237570 IPI:IPI00518722 PIR:T01808
RefSeq:NP_198063.1 UniGene:At.65555 UniGene:At.74336
ProteinModelPortal:O04659 SMR:O04659 STRING:O04659 PaxDb:O04659
PRIDE:O04659 EnsemblPlants:AT5G27110.1 GeneID:832769
KEGG:ath:AT5G27110 GeneFarm:4221 TAIR:At5g27110 eggNOG:NOG251542
OMA:SILMACS PhylomeDB:O04659 ProtClustDB:CLSN2686965
Genevestigator:O04659 Uniprot:O04659
Length = 691
Score = 117 (46.2 bits), Expect = 0.00033, P = 0.00033
Identities = 38/148 (25%), Positives = 69/148 (46%)
Query: 5 KQIHSQTIKLGLLTKPHCPKQTRYLLLYEKGD-LKYECKVFRKITQPSVFLWNTMIKGYS 63
K+IH + +K G + + + +Y K D L+ +VF+K+ + S+ WN+MIKGY
Sbjct: 228 KEIHRKCVKKGFELDEYV--NSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYV 285
Query: 64 RIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKGFTRD--------IAGSLEKSCIVMRVF 115
K+ V + ++ R T + +R I G + +S + ++
Sbjct: 286 AKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIY 345
Query: 116 VQNALISTYCLCGEVDMARGIFYMSCED 143
V +LI Y CGE ++A +F + +D
Sbjct: 346 VNCSLIDLYFKCGEANLAETVFSKTQKD 373
>TAIR|locus:2080727 [details] [associations]
symbol:MEF10 "mitochondrial RNA editing factor 10"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0016554 "cytidine to uridine editing"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC008153 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00530970
RefSeq:NP_187753.1 UniGene:At.53270 ProteinModelPortal:Q9CAY1
SMR:Q9CAY1 PaxDb:Q9CAY1 PRIDE:Q9CAY1 EnsemblPlants:AT3G11460.1
GeneID:820319 KEGG:ath:AT3G11460 GeneFarm:3438 TAIR:At3g11460
eggNOG:NOG330951 InParanoid:Q9CAY1 OMA:GLITWNA PhylomeDB:Q9CAY1
ProtClustDB:CLSN2684416 Genevestigator:Q9CAY1 Uniprot:Q9CAY1
Length = 623
Score = 116 (45.9 bits), Expect = 0.00038, P = 0.00038
Identities = 36/142 (25%), Positives = 65/142 (45%)
Query: 5 KQIHSQTIKLGLLTKPHCPKQTRYLLLYEK-GDLKYECKVFRKITQPSVFLWNTMIKGYS 63
+ +H Q +K GL ++ ++ +Y K G ++ ++F ++ + WN +I GYS
Sbjct: 176 RSLHGQCVKGGLDSE--VAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYS 233
Query: 64 RIDSHKNGVLMYLDLLKSDVRRDNYTFPFLF--------KGFTRDIAGSLEKSCIVMRVF 115
+ + + +Y + S V D +T + K ++ +E + V VF
Sbjct: 234 QNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVF 293
Query: 116 VQNALISTYCLCGEVDMARGIF 137
V NA IS Y CG + AR +F
Sbjct: 294 VSNASISMYARCGNLAKARAVF 315
>TAIR|locus:2100392 [details] [associations]
symbol:AT3G47840 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL049746 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00525955 PIR:T07723 RefSeq:NP_190368.1 UniGene:At.53826
ProteinModelPortal:Q9STS9 SMR:Q9STS9 PaxDb:Q9STS9 PRIDE:Q9STS9
EnsemblPlants:AT3G47840.1 GeneID:823940 KEGG:ath:AT3G47840
GeneFarm:3701 TAIR:At3g47840 eggNOG:NOG249488 InParanoid:Q9STS9
OMA:IKEPGWS PhylomeDB:Q9STS9 ProtClustDB:CLSN2684004
Genevestigator:Q9STS9 Uniprot:Q9STS9
Length = 706
Score = 116 (45.9 bits), Expect = 0.00045, P = 0.00045
Identities = 35/149 (23%), Positives = 66/149 (44%)
Query: 5 KQIHSQTIKLGLLTKPHCPKQTRYLLLYEK-GDLKYECKVFRKITQPSVFLWNTMIKGYS 63
+ +H+ +K LL+ + L +Y++ G + C+VF ++ + W +I G
Sbjct: 128 ESLHAYAVKTSLLSSVYVGSSL--LDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLV 185
Query: 64 RIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKGFT--RDIA-GSLEKSCIVMRVFVQ--- 117
+K G+ + ++ +S+ D YTF K R + G + +++R FV
Sbjct: 186 HAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLC 245
Query: 118 --NALISTYCLCGEVDMARGIFYMSCEDD 144
N+L + Y CGE+ +F E D
Sbjct: 246 VANSLATMYTECGEMQDGLCLFENMSERD 274
>TAIR|locus:2057574 [details] [associations]
symbol:AT2G33760 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:U78721 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
IPI:IPI00521080 PIR:C84749 RefSeq:NP_180932.1 UniGene:At.66304
UniGene:At.68773 ProteinModelPortal:P93011 SMR:P93011
EnsemblPlants:AT2G33760.1 GeneID:817942 KEGG:ath:AT2G33760
GeneFarm:3149 TAIR:At2g33760 eggNOG:NOG259057 InParanoid:P93011
OMA:SPSNYTF PhylomeDB:P93011 ProtClustDB:CLSN2683510
Genevestigator:P93011 Uniprot:P93011
Length = 583
Score = 115 (45.5 bits), Expect = 0.00046, P = 0.00046
Identities = 40/143 (27%), Positives = 67/143 (46%)
Query: 3 QLKQIHSQTIKLGLLTKPHCPKQTRYLLLYEKGDLKYECKVFRKITQPSVFLWNTMIKGY 62
QL+Q+H+ I G + L + + Y +F + P FL+N++IK
Sbjct: 24 QLQQVHAHLIVTGYGRSRSLLTKLITLACSARA-IAYTHLLFLSVPLPDDFLFNSVIKST 82
Query: 63 SRIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKGFTRDIAGSLEKS--C--IV----MRV 114
S++ + V Y +L S+V NYTF + K A + K C +V +
Sbjct: 83 SKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDT 142
Query: 115 FVQNALISTYCLCGEVDMARGIF 137
+VQ AL++ Y CG+++ AR +F
Sbjct: 143 YVQAALVTFYSKCGDMEGARQVF 165
>TAIR|locus:2097365 [details] [associations]
symbol:AT3G49710 "AT3G49710" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00533707 PIR:T46037 RefSeq:NP_190540.1
UniGene:At.22445 UniGene:At.53859 ProteinModelPortal:Q9M2Y7
SMR:Q9M2Y7 EnsemblPlants:AT3G49710.1 GeneID:824133
KEGG:ath:AT3G49710 GeneFarm:3525 TAIR:At3g49710 eggNOG:NOG274207
InParanoid:Q9M2Y7 OMA:DDCSFVC PhylomeDB:Q9M2Y7
ProtClustDB:CLSN2684258 Genevestigator:Q9M2Y7 Uniprot:Q9M2Y7
Length = 721
Score = 116 (45.9 bits), Expect = 0.00046, P = 0.00046
Identities = 45/147 (30%), Positives = 67/147 (45%)
Query: 5 KQIHSQTIKLGLLTKPHCPKQTRYLLLYEK--G-DLKYEC-KVFRKITQPSVFLWNTMIK 60
+Q H + IK G H + + Y K G D Y+ KVF++I P + +WNTMI
Sbjct: 260 RQFHGKLIKAGFHQNSHVG--SGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMIS 317
Query: 61 GYSRIDS-HKNGVLMYLDLLKSDVRRDNYTFPFLFKGFT--------RDIAGSLEKSCIV 111
GYS + + V + + + R D+ +F + + + I G KS I
Sbjct: 318 GYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIP 377
Query: 112 M-RVFVQNALISTYCLCGEVDMARGIF 137
R+ V NALIS Y G + AR +F
Sbjct: 378 SNRISVNNALISLYYKSGNLQDARWVF 404
>TAIR|locus:2097410 [details] [associations]
symbol:AT3G49740 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132965 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041 IPI:IPI00544594
PIR:T46040 RefSeq:NP_190543.1 UniGene:At.35573
ProteinModelPortal:Q9M2Y4 SMR:Q9M2Y4 PRIDE:Q9M2Y4
EnsemblPlants:AT3G49740.1 GeneID:824136 KEGG:ath:AT3G49740
GeneFarm:3703 TAIR:At3g49740 eggNOG:NOG307462 HOGENOM:HOG000115631
InParanoid:Q9M2Y4 OMA:EFTFGSL PhylomeDB:Q9M2Y4
ProtClustDB:CLSN2684366 Genevestigator:Q9M2Y4 Uniprot:Q9M2Y4
Length = 737
Score = 116 (45.9 bits), Expect = 0.00047, P = 0.00047
Identities = 36/142 (25%), Positives = 64/142 (45%)
Query: 6 QIHSQTIKLGLLTKPHCPKQTRYLLLYEK-GDLKYECKVFRKITQPSVFLWNTMIKGYSR 64
Q+H IK G + + + +Y D KVF + + + WNTMI Y++
Sbjct: 309 QVHGLAIKTGY--EKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQ 366
Query: 65 IDSHKNGVLMYLDLLKSDVRRDNYTF-PFLFKGFTRDIAGSLEKSCIVM-----RVFVQN 118
K+ + +Y + V+ D +TF L D+ + ++CI+ ++ + N
Sbjct: 367 AKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVL-EMVQACIIKFGLSSKIEISN 425
Query: 119 ALISTYCLCGEVDMARGIFYMS 140
ALIS Y G+++ A +F S
Sbjct: 426 ALISAYSKNGQIEKADLLFERS 447
>TAIR|locus:2057986 [details] [associations]
symbol:AT2G36980 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC006922 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
Pfam:PF13041 EMBL:AY461626 EMBL:AY461627 IPI:IPI00523229 PIR:A84787
RefSeq:NP_181235.1 UniGene:At.37481 ProteinModelPortal:Q9SJK9
SMR:Q9SJK9 EnsemblPlants:AT2G36980.1 GeneID:818272
KEGG:ath:AT2G36980 GeneFarm:3671 TAIR:At2g36980 eggNOG:NOG289031
HOGENOM:HOG000243248 InParanoid:Q9SJK9 OMA:LTQVSWN PhylomeDB:Q9SJK9
ProtClustDB:CLSN2683956 ArrayExpress:Q9SJK9 Genevestigator:Q9SJK9
Uniprot:Q9SJK9
Length = 625
Score = 115 (45.5 bits), Expect = 0.00050, P = 0.00050
Identities = 33/121 (27%), Positives = 54/121 (44%)
Query: 31 LYEKGDLKYECKVFRKITQPSVFLWNTMIKGYSRIDSHKNGVLMYLDLLKSDVRRDNYTF 90
L + G + +VF + + WNTM+ YSR+ H+ + ++ L SD + D+Y+F
Sbjct: 14 LAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSF 73
Query: 91 PFLFK-----G---FTRDIAGSLEKSCIVMRVFVQNALISTYCLCGEVDMARGIFYMSCE 142
+ G F R I + +S + V N+LI Y C + A +F C
Sbjct: 74 TAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCC 133
Query: 143 D 143
D
Sbjct: 134 D 134
>TAIR|locus:2161018 [details] [associations]
symbol:AT5G56310 "AT5G56310" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 EMBL:AB009049
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237569 EMBL:AK229016 IPI:IPI00527231
RefSeq:NP_200442.1 UniGene:At.70454 ProteinModelPortal:Q9FMA1
SMR:Q9FMA1 PRIDE:Q9FMA1 EnsemblPlants:AT5G56310.1 GeneID:835730
KEGG:ath:AT5G56310 GeneFarm:4045 TAIR:At5g56310 eggNOG:NOG310822
InParanoid:Q9FMA1 OMA:KANAAIW PhylomeDB:Q9FMA1
ProtClustDB:CLSN2687172 Genevestigator:Q9FMA1 Uniprot:Q9FMA1
Length = 530
Score = 114 (45.2 bits), Expect = 0.00052, P = 0.00052
Identities = 43/145 (29%), Positives = 59/145 (40%)
Query: 4 LKQIHSQTIKLGLLTKPHCPKQTRYLLLYEKGDLKYECKVFRKITQPSVFLWNTMIKGYS 63
LKQ H I GL + + G L+Y VF P+ +L NTMI+ S
Sbjct: 31 LKQSHCYMIITGL-NRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALS 89
Query: 64 RID---SHKNGVLMYLDLLKSDVRRDNYTFPFLFK--------GFTRDIAGSLEKSCIVM 112
+D +H + +Y L + D +TFPF+ K F R I G +
Sbjct: 90 LLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDS 149
Query: 113 RVFVQNALISTYCLCGEVDMARGIF 137
V V LI Y CG + AR +F
Sbjct: 150 SVHVVTGLIQMYFSCGGLGDARKMF 174
>TAIR|locus:2012517 [details] [associations]
symbol:AT1G14470 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC012188 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00529823 PIR:E86279 RefSeq:NP_172899.1 UniGene:At.51608
ProteinModelPortal:Q9M9R6 SMR:Q9M9R6 EnsemblPlants:AT1G14470.1
GeneID:838009 KEGG:ath:AT1G14470 GeneFarm:4286 TAIR:At1g14470
eggNOG:NOG297619 InParanoid:Q9M9R6 OMA:KHESVES PhylomeDB:Q9M9R6
ProtClustDB:CLSN2682948 Genevestigator:Q9M9R6 Uniprot:Q9M9R6
Length = 540
Score = 114 (45.2 bits), Expect = 0.00053, P = 0.00053
Identities = 28/110 (25%), Positives = 57/110 (51%)
Query: 36 DLKYECKVFRKITQPSVFLWNTMIKGYSRIDSHKNGVLMYLDLLKSDVRRDNYTFPFL-- 93
DL+ K F ++ + SV WN M+ GY++ ++ + ++ D+L+ VR + T+ +
Sbjct: 213 DLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVIS 272
Query: 94 ---FKG---FTRDIAGSLEKSCIVMRVFVQNALISTYCLCGEVDMARGIF 137
F+ TR + +++ + + FV+ AL+ + C ++ AR IF
Sbjct: 273 ACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIF 322
>TAIR|locus:2010652 [details] [associations]
symbol:AT1G04840 "AT1G04840" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC004809 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237569 IPI:IPI00518058 PIR:F86181 RefSeq:NP_171976.1
UniGene:At.51482 ProteinModelPortal:Q9MAT2 SMR:Q9MAT2
EnsemblPlants:AT1G04840.1 GeneID:839402 KEGG:ath:AT1G04840
GeneFarm:3457 TAIR:At1g04840 eggNOG:NOG254388 InParanoid:Q9MAT2
OMA:GDCHSLM PhylomeDB:Q9MAT2 ProtClustDB:CLSN2681950
Genevestigator:Q9MAT2 Uniprot:Q9MAT2
Length = 665
Score = 113 (44.8 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 34/142 (23%), Positives = 68/142 (47%)
Query: 4 LKQIHSQTIKLGLLTKPHCPKQTRYLLLYEKGDLKYECKVFRKITQPSVFLWNTMIKGYS 63
L+ +H+Q ++ G+L+ + L + D Y +FR + + F+ N +I+G +
Sbjct: 45 LRHVHAQILRRGVLSSRVAAQLVSCSSLLKSPD--YSLSIFRNSEERNPFVLNALIRGLT 102
Query: 64 RIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFK-----GFT---RDIAGSLEKSCIVMRVF 115
++ V ++ +L+ V+ D TFPF+ K GF R + + K+ + F
Sbjct: 103 ENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSF 162
Query: 116 VQNALISTYCLCGEVDMARGIF 137
V+ +L+ Y G++ A +F
Sbjct: 163 VRLSLVDMYAKTGQLKHAFQVF 184
Score = 41 (19.5 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 138 YMSCEDDDGLHELIRIKAVDDDLHELFPEYLVQMLALPDTFMGEG 182
Y +C+ G R ++V +L EL PE + L T +G
Sbjct: 469 YRACKAHKGYR---RAESVSQNLLELDPELCGSYIFLDKTHASKG 510
>TAIR|locus:2205425 [details] [associations]
symbol:AT1G68930 "AT1G68930" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC011665 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
IPI:IPI00528975 PIR:H96713 RefSeq:NP_177059.1 UniGene:At.52442
ProteinModelPortal:Q9CAA8 SMR:Q9CAA8 EnsemblPlants:AT1G68930.1
GeneID:843226 KEGG:ath:AT1G68930 GeneFarm:3231 TAIR:At1g68930
eggNOG:NOG300864 HOGENOM:HOG000237570 InParanoid:Q9CAA8 OMA:EEGAQFH
PhylomeDB:Q9CAA8 ProtClustDB:CLSN2682344 Genevestigator:Q9CAA8
Uniprot:Q9CAA8
Length = 743
Score = 115 (45.5 bits), Expect = 0.00063, P = 0.00063
Identities = 38/144 (26%), Positives = 66/144 (45%)
Query: 5 KQIHSQTIKLGLLTKPHCPKQTRYLLLYEKGD-LKYECKVFRKITQPSVFLWNTMIKGYS 63
KQIH+ I+ + H + + +Y K L Y VF ++ Q +V W M+ GY
Sbjct: 290 KQIHACIIRTNF--QDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYG 347
Query: 64 RIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKGFTRDIAGSLEK----------SCIVMR 113
+ + V ++LD+ +S + D+YT SLE+ S ++
Sbjct: 348 QTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACAN--VSSLEEGSQFHGKAITSGLIHY 405
Query: 114 VFVQNALISTYCLCGEVDMARGIF 137
V V N+L++ Y CG++D + +F
Sbjct: 406 VTVSNSLVTLYGKCGDIDDSTRLF 429
>TAIR|locus:2055919 [details] [associations]
symbol:AT2G22070 "AT2G22070" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR019734 Pfam:PF13176
InterPro:IPR002885 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
EMBL:AC007232 Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00546911
PIR:F84608 RefSeq:NP_179798.1 UniGene:At.39486
ProteinModelPortal:Q9SHZ8 SMR:Q9SHZ8 EnsemblPlants:AT2G22070.1
GeneID:816742 KEGG:ath:AT2G22070 GeneFarm:3362 TAIR:At2g22070
eggNOG:NOG294209 InParanoid:Q9SHZ8 OMA:SHYACMV PhylomeDB:Q9SHZ8
ProtClustDB:CLSN2683727 Genevestigator:Q9SHZ8 Uniprot:Q9SHZ8
Length = 786
Score = 115 (45.5 bits), Expect = 0.00067, P = 0.00067
Identities = 35/118 (29%), Positives = 55/118 (46%)
Query: 29 LLLYEK-GDLKYECKVFRKITQPSVFLWNTMIKGYSRIDSHKNGVLMYLDLLKSDVRRDN 87
L Y K GD+ C+ F ++ Q W TMI GY I + + + D++K +
Sbjct: 87 LSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQ 146
Query: 88 YTFPFLFKGF--TRDI-AGSLEKSCIV---MR--VFVQNALISTYCLCGEVDMARGIF 137
+T + TR + G S IV +R V V N+L++ Y CG+ MA+ +F
Sbjct: 147 FTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVF 204
>TAIR|locus:2202074 [details] [associations]
symbol:CRR22 "CHLORORESPIRATORY REDUCTION22" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0004519 "endonuclease activity" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0016556 "mRNA modification"
evidence=RCA;IMP] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0016556
Gene3D:1.25.40.10 PROSITE:PS51375 GO:GO:0004519 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AC007259 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00534837 RefSeq:NP_172596.1 UniGene:At.65900
ProteinModelPortal:Q3E6Q1 SMR:Q3E6Q1 STRING:Q3E6Q1 PaxDb:Q3E6Q1
PRIDE:Q3E6Q1 EnsemblPlants:AT1G11290.1 GeneID:837671
KEGG:ath:AT1G11290 GeneFarm:3466 TAIR:At1g11290 eggNOG:NOG272527
InParanoid:Q3E6Q1 OMA:HVITWNA PhylomeDB:Q3E6Q1
ProtClustDB:CLSN2681952 Genevestigator:Q3E6Q1 Uniprot:Q3E6Q1
Length = 809
Score = 115 (45.5 bits), Expect = 0.00070, P = 0.00070
Identities = 41/153 (26%), Positives = 71/153 (46%)
Query: 1 MHQLKQIHSQTIKLGLLTKPHCPKQTRYLLLYEK-GDLKYECKVFRKITQPSVFLWNTMI 59
+ +L+QI K GL + H QT+ + L+ + G + +VF I L++TM+
Sbjct: 50 LKELRQILPLVFKNGLYQE-HF-FQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTML 107
Query: 60 KGYSRIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFK--G------FTRDIAGSLEKSCIV 111
KG++++ + ++ + DV Y F +L K G ++I G L KS
Sbjct: 108 KGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFS 167
Query: 112 MRVFVQNALISTYCLCGEVDMARGIFYMSCEDD 144
+ +F L + Y C +V+ AR +F E D
Sbjct: 168 LDLFAMTGLENMYAKCRQVNEARKVFDRMPERD 200
Score = 114 (45.2 bits), Expect = 0.00090, P = 0.00090
Identities = 38/146 (26%), Positives = 67/146 (45%)
Query: 7 IHSQTIKLGLLTKPHCPKQTRYLLLYEK-GDLKYECKVFRKITQPSVFLWNTMIKGYSRI 65
IH +++LGL + + +Y K ++ +F K+ ++ WN MI G+++
Sbjct: 359 IHKLSVELGL--DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQ- 415
Query: 66 DSHKNGVLMYLDLLKS-DVRRDNYTFPFLFKGFT--------RDIAGSLEKSCIVMRVFV 116
+ L Y ++S V+ D +T+ + + I G + +SC+ VFV
Sbjct: 416 NGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFV 475
Query: 117 QNALISTYCLCGEVDMARGIFYMSCE 142
AL+ Y CG + +AR IF M E
Sbjct: 476 TTALVDMYAKCGAIMIARLIFDMMSE 501
>TAIR|locus:2088827 [details] [associations]
symbol:AT3G26540 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AB028611 Pfam:PF13041 IPI:IPI00519926
RefSeq:NP_189286.1 UniGene:At.65162 ProteinModelPortal:Q9LRV2
SMR:Q9LRV2 PRIDE:Q9LRV2 EnsemblPlants:AT3G26540.1 GeneID:822262
KEGG:ath:AT3G26540 GeneFarm:4287 TAIR:At3g26540 eggNOG:NOG262114
HOGENOM:HOG000083802 InParanoid:Q9LRV2 OMA:ECMIELL PhylomeDB:Q9LRV2
ProtClustDB:CLSN2684861 Genevestigator:Q9LRV2 Uniprot:Q9LRV2
Length = 700
Score = 114 (45.2 bits), Expect = 0.00075, P = 0.00075
Identities = 35/143 (24%), Positives = 68/143 (47%)
Query: 4 LKQIHSQTIKLGLLTKPHCPKQTRYLLLYEKGDLKYECK-VFRKITQPSVFLWNTMIKGY 62
L+Q+H +K G + +T + +Y K + + + VF +I PS WN +++ Y
Sbjct: 181 LRQLHCAVVKYGY--SGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRY 238
Query: 63 SRIDSHKNGVLMYLDLLKSDVRRDNYTFPFLFKGFTRDIA---GSLEKSCIVMRVFVQNA 119
+ + V+M+ +L+ +VR N+T + +R +A G + + V V +
Sbjct: 239 LEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADT 298
Query: 120 LIST-----YCLCGEVDMARGIF 137
++ST Y C ++ AR +F
Sbjct: 299 VVSTSVFDMYVKCDRLESARRVF 321
>TAIR|locus:2131939 [details] [associations]
symbol:MEF29 "AT4G30700" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0000963
"mitochondrial RNA processing" evidence=IMP] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0016554 "cytidine to uridine editing"
evidence=IMP] [GO:0080156 "mitochondrial mRNA modification"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016554
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL161577 Pfam:PF01535
TIGRFAMs:TIGR00756 GO:GO:0000963 Pfam:PF13041 HOGENOM:HOG000237570
GO:GO:0080156 EMBL:AL109787 EMBL:BX828159 EMBL:AJ006042
IPI:IPI00535639 PIR:C85359 PIR:T52645 RefSeq:NP_194799.1
UniGene:At.65435 ProteinModelPortal:Q9SUH6 SMR:Q9SUH6 PaxDb:Q9SUH6
PRIDE:Q9SUH6 EnsemblPlants:AT4G30700.1 GeneID:829193
KEGG:ath:AT4G30700 GeneFarm:3164 TAIR:At4g30700 eggNOG:NOG256068
InParanoid:Q9SUH6 OMA:MVKVHSE PhylomeDB:Q9SUH6
ProtClustDB:CLSN2685640 Genevestigator:Q9SUH6 Uniprot:Q9SUH6
Length = 792
Score = 114 (45.2 bits), Expect = 0.00088, P = 0.00088
Identities = 41/143 (28%), Positives = 63/143 (44%)
Query: 6 QIHSQTIKLGLLTKPHCPKQTRYLLLYEK-GDLKYECKVFRKITQPSVFLWNTMIKGYSR 64
QIHS K G + H T ++ LY K G +K +FR+ +P + +N MI GY+
Sbjct: 242 QIHSLATKTGCYS--HDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTS 299
Query: 65 IDSHKNGVLMYLDLLKSDVRRDNYTFPFLF--KGFTR---DIAGSLEKSCIVMRVFVQNA 119
+ + ++ +L+ S R + T L G I G KS + V A
Sbjct: 300 NGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTA 359
Query: 120 LISTYCLCGEVDMARGIFYMSCE 142
L + Y E++ AR +F S E
Sbjct: 360 LTTVYSKLNEIESARKLFDESPE 382
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.140 0.421 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 230 230 0.00083 113 3 11 22 0.38 33
32 0.42 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 64
No. of states in DFA: 598 (64 KB)
Total size of DFA: 188 KB (2108 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.75u 0.09s 19.84t Elapsed: 00:00:01
Total cpu time: 19.76u 0.09s 19.85t Elapsed: 00:00:01
Start: Thu May 9 21:05:17 2013 End: Thu May 9 21:05:18 2013