Your job contains 1 sequence.
>042214
MASTGAARGGEVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDAD
DDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLT
EVEKGGKKALDKVGTGGTMRASAGSSMRDDYGGSGRSRIGFERGR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042214
(165 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2195970 - symbol:SKIP "SNW/Ski-interacting pro... 611 1.3e-59 1
FB|FBgn0004856 - symbol:Bx42 "Bx42" species:7227 "Drosoph... 295 1.8e-25 1
UNIPROTKB|G3V4X8 - symbol:SNW1 "SNW domain-containing pro... 283 7.6e-25 1
UNIPROTKB|Q13573 - symbol:SNW1 "SNW domain-containing pro... 283 3.4e-24 1
UNIPROTKB|Q5R7R9 - symbol:SNW1 "SNW domain-containing pro... 283 3.4e-24 1
UNIPROTKB|Q1JQE0 - symbol:SNW1 "SNW domain-containing pro... 282 4.4e-24 1
UNIPROTKB|J9P334 - symbol:SNW1 "Uncharacterized protein" ... 282 4.4e-24 1
UNIPROTKB|I3L897 - symbol:SNW1 "Uncharacterized protein" ... 282 4.4e-24 1
RGD|1561926 - symbol:Snw1 "SNW domain containing 1" speci... 281 5.7e-24 1
MGI|MGI:1913604 - symbol:Snw1 "SNW domain containing 1" s... 280 7.4e-24 1
UNIPROTKB|E2RNF5 - symbol:SNW1 "Uncharacterized protein" ... 276 2.0e-23 1
UNIPROTKB|F1NNJ3 - symbol:SNW1 "Uncharacterized protein" ... 271 7.2e-23 1
WB|WBGene00004806 - symbol:skp-1 species:6239 "Caenorhabd... 231 1.6e-18 1
UNIPROTKB|Q22836 - symbol:T27F2.1 "Uncharacterized protei... 231 1.6e-18 1
ASPGD|ASPL0000009849 - symbol:AN8180 species:162425 "Emer... 226 6.9e-18 1
UNIPROTKB|G4N190 - symbol:MGG_07472 "Pre-mRNA-processing ... 223 1.4e-17 1
DICTYBASE|DDB_G0269188 - symbol:snwA "nuclear receptor co... 191 5.4e-14 1
POMBASE|SPCC188.11 - symbol:prp45 "splicing factor Prp45"... 188 8.0e-14 1
UNIPROTKB|G3V3A4 - symbol:SNW1 "SNW domain-containing pro... 172 4.4e-12 1
>TAIR|locus:2195970 [details] [associations]
symbol:SKIP "SNW/Ski-interacting protein" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=ISS;IMP] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0010555 "response to mannitol stimulus"
evidence=IEP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0000956 "nuclear-transcribed mRNA
catabolic process" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IMP] [GO:0042752 "regulation of
circadian rhythm" evidence=IGI] InterPro:IPR004015
InterPro:IPR017862 Pfam:PF02731 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0045893 GO:GO:0005730
GO:GO:0008380 GO:GO:0009651 EMBL:AC004260 GO:GO:0042752
GO:GO:0005681 GO:GO:0010228 GO:GO:0000398 eggNOG:NOG295848
KO:K06063 OMA:HIYRPSK PANTHER:PTHR12096 GO:GO:0010555
HOGENOM:HOG000160386 UniGene:At.71064 EMBL:AF386950 EMBL:AY058079
EMBL:AY081520 EMBL:AK175914 EMBL:AK176196 EMBL:AK176338
EMBL:AK176413 EMBL:AK176837 EMBL:AK221263 IPI:IPI00548698
PIR:T00448 RefSeq:NP_001031291.1 RefSeq:NP_565151.1
UniGene:At.22662 IntAct:O80653 STRING:O80653 PaxDb:O80653
PRIDE:O80653 ProMEX:O80653 EnsemblPlants:AT1G77180.1
EnsemblPlants:AT1G77180.2 GeneID:844055 KEGG:ath:AT1G77180
TAIR:At1g77180 InParanoid:O80653 PhylomeDB:O80653
ProtClustDB:CLSN2718907 Genevestigator:O80653 Uniprot:O80653
Length = 613
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 120/167 (71%), Positives = 142/167 (85%)
Query: 1 MASTGAARGGEVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDAD 60
MASTG GGEV YDQRLFNQ+KGMDSGFA DDQYN+YDKGLFTAQPTLSTLY+PKKD D
Sbjct: 446 MASTGGKGGGEVMYDQRLFNQDKGMDSGFAADDQYNLYDKGLFTAQPTLSTLYKPKKDND 505
Query: 61 DDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERSGP-RDRPVEFEKEAEEADPFGLDEFL 119
++MYG NADEQ++KI T+RFKPDK F G+SER G RDRPVEFEKE EE DPFGL++++
Sbjct: 506 EEMYG-NADEQLDKIKNTERFKPDKAFTGASERVGSKRDRPVEFEKE-EEQDPFGLEKWV 563
Query: 120 TEVEKGGKKALDKVGTGGTMRASAG---SSMRDDYGGSGRSRIGFER 163
++++KG KK LDK+G+GGTMRAS G SS DD+GGSGR++I FER
Sbjct: 564 SDLKKG-KKPLDKIGSGGTMRASGGGGSSSRDDDHGGSGRTKINFER 609
>FB|FBgn0004856 [details] [associations]
symbol:Bx42 "Bx42" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=NAS] [GO:0035214 "eye-antennal disc
development" evidence=IMP] [GO:0000790 "nuclear chromatin"
evidence=NAS] [GO:0001700 "embryonic development via the syncytial
blastoderm" evidence=IMP] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA;IC] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR004015 InterPro:IPR017862
Pfam:PF02731 GO:GO:0001700 GO:GO:0003677 EMBL:AE014298
GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 EMBL:X64536 EMBL:AY113364
PIR:A56575 RefSeq:NP_511093.2 UniGene:Dm.2932 DIP:DIP-17877N
IntAct:P39736 MINT:MINT-334628 STRING:P39736 PaxDb:P39736
PRIDE:P39736 EnsemblMetazoa:FBtr0071350 EnsemblMetazoa:FBtr0333809
GeneID:31840 KEGG:dme:Dmel_CG8264 CTD:31840 FlyBase:FBgn0004856
eggNOG:NOG295848 GeneTree:ENSGT00390000010423 InParanoid:P39736
KO:K06063 OMA:HIYRPSK OrthoDB:EOG4PNVZ4 PhylomeDB:P39736
GenomeRNAi:31840 NextBio:775589 Bgee:P39736 GermOnline:CG8264
GO:GO:0035214 PANTHER:PTHR12096 Uniprot:P39736
Length = 547
Score = 295 (108.9 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 64/129 (49%), Positives = 81/129 (62%)
Query: 6 AARGGEVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYG 65
+A GE +DQRLFN KGMDSG+ D+ YNVYDK + + +YRP K AD D YG
Sbjct: 410 SAGNGETLFDQRLFNTTKGMDSGYGDDEAYNVYDKPWRDSNTLGAHIYRPSKQADSDNYG 469
Query: 66 GNADEQMEKIMKTDRFKPDKGFAGSSERS--GPRDRPVEFEKEAEEADPFGLDEFLTEVE 123
G+ D I+ T RF PDK F+G+S+ + G R PVEFEKE DPFGLD+FL +
Sbjct: 470 GDLDA----IVNTKRFVPDKQFSGASKEAAAGQRSGPVEFEKEE---DPFGLDQFLNMAK 522
Query: 124 KGGKKALDK 132
K K+A +K
Sbjct: 523 KAPKRAEEK 531
>UNIPROTKB|G3V4X8 [details] [associations]
symbol:SNW1 "SNW domain-containing protein 1" species:9606
"Homo sapiens" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0000785 "chromatin" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR004015 InterPro:IPR017862 Pfam:PF02731 GO:GO:0005634
GO:GO:0000785 GO:GO:0005681 GO:GO:0000398 PANTHER:PTHR12096
EMBL:AC008372 HGNC:HGNC:16696 Ensembl:ENST00000554775
ArrayExpress:G3V4X8 Bgee:G3V4X8 Uniprot:G3V4X8
Length = 374
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 62/121 (51%), Positives = 79/121 (65%)
Query: 11 EVTYDQRLFNQEKGMDSGFA--TDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNA 68
EV YDQRLFNQ KGMDSGFA D+ YNVYD+ + ++YRP K+ D DMYG
Sbjct: 242 EVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYG--- 298
Query: 69 DEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEVEK-GGK 127
+ +E +KT+RF PDK F+GS R R+ PV+FE+ DPFGLD+FL E ++ GG
Sbjct: 299 -DDLEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEE-----DPFGLDKFLEEAKQHGGS 352
Query: 128 K 128
K
Sbjct: 353 K 353
>UNIPROTKB|Q13573 [details] [associations]
symbol:SNW1 "SNW domain-containing protein 1" species:9606
"Homo sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0000785 "chromatin" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005112 "Notch binding"
evidence=IPI] [GO:0005681 "spliceosomal complex" evidence=IDA]
[GO:0044428 "nuclear part" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071300 "cellular response to
retinoic acid" evidence=IDA] [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=IDA] [GO:0050769 "positive regulation
of neurogenesis" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0035257 "nuclear hormone receptor binding" evidence=IDA]
[GO:0070564 "positive regulation of vitamin D receptor signaling
pathway" evidence=IDA] [GO:0046332 "SMAD binding" evidence=IDA]
[GO:0030511 "positive regulation of transforming growth factor beta
receptor signaling pathway" evidence=IDA] [GO:0071146 "SMAD3-SMAD4
protein complex" evidence=IDA] [GO:0042974 "retinoic acid receptor
binding" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0042809 "vitamin D receptor binding"
evidence=IDA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IMP] [GO:0016363 "nuclear matrix"
evidence=IDA] [GO:0070562 "regulation of vitamin D receptor
signaling pathway" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0048385 "regulation of retinoic acid receptor
signaling pathway" evidence=IDA] [GO:0008024 "positive
transcription elongation factor complex b" evidence=IDA]
[GO:0043923 "positive regulation by host of viral transcription"
evidence=IMP;IDA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IMP] [GO:0042771 "intrinsic apoptotic
signaling pathway in response to DNA damage by p53 class mediator"
evidence=IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_71 InterPro:IPR004015
InterPro:IPR017862 Pfam:PF02731 EMBL:AF045184 Reactome:REACT_111102
GO:GO:0003714 GO:GO:0005654 EMBL:CH471061 GO:GO:0042771
GO:GO:0071300 GO:GO:0045944 GO:GO:0007219 GO:GO:0000785
GO:GO:0000122 GO:GO:0003713 GO:GO:0050769 GO:GO:0046332
GO:GO:0030511 GO:GO:0048385 GO:GO:0016363 GO:GO:0048384
GO:GO:0006367 GO:GO:0042974 GO:GO:0000398 GO:GO:0071013
GO:GO:0051571 eggNOG:NOG295848 KO:K06063 PANTHER:PTHR12096
Reactome:REACT_2155 GO:GO:0048026 GO:GO:0070564 GO:GO:0043923
GO:GO:0042809 HOGENOM:HOG000160386 CTD:22938 HOVERGEN:HBG047516
OrthoDB:EOG4RBQJG EMBL:U51432 EMBL:BT020060 EMBL:BT020061
EMBL:AK292274 EMBL:AC008372 EMBL:BC040112 EMBL:BC046105
EMBL:BC108903 EMBL:U43960 IPI:IPI00013830 RefSeq:NP_036377.1
UniGene:Hs.445498 ProteinModelPortal:Q13573 IntAct:Q13573
MINT:MINT-193944 STRING:Q13573 PhosphoSite:Q13573 DMDM:2500813
PaxDb:Q13573 PeptideAtlas:Q13573 PRIDE:Q13573 DNASU:22938
Ensembl:ENST00000261531 GeneID:22938 KEGG:hsa:22938 UCSC:uc001xuf.3
GeneCards:GC14M078183 HGNC:HGNC:16696 HPA:CAB009931 HPA:HPA002457
HPA:HPA017370 MIM:603055 neXtProt:NX_Q13573 PharmGKB:PA134883977
InParanoid:Q13573 PhylomeDB:Q13573 GenomeRNAi:22938 NextBio:43687
ArrayExpress:Q13573 Bgee:Q13573 CleanEx:HS_SNW1
Genevestigator:Q13573 GermOnline:ENSG00000100603 Uniprot:Q13573
Length = 536
Score = 283 (104.7 bits), Expect = 3.4e-24, P = 3.4e-24
Identities = 62/121 (51%), Positives = 79/121 (65%)
Query: 11 EVTYDQRLFNQEKGMDSGFA--TDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNA 68
EV YDQRLFNQ KGMDSGFA D+ YNVYD+ + ++YRP K+ D DMYG
Sbjct: 404 EVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYG--- 460
Query: 69 DEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEVEK-GGK 127
+ +E +KT+RF PDK F+GS R R+ PV+FE+ DPFGLD+FL E ++ GG
Sbjct: 461 -DDLEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEE-----DPFGLDKFLEEAKQHGGS 514
Query: 128 K 128
K
Sbjct: 515 K 515
>UNIPROTKB|Q5R7R9 [details] [associations]
symbol:SNW1 "SNW domain-containing protein 1" species:9601
"Pongo abelii" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0003713
"transcription coactivator activity" evidence=ISS] [GO:0003714
"transcription corepressor activity" evidence=ISS] [GO:0016363
"nuclear matrix" evidence=ISS] [GO:0030511 "positive regulation of
transforming growth factor beta receptor signaling pathway"
evidence=ISS] [GO:0035257 "nuclear hormone receptor binding"
evidence=ISS] [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=ISS]
[GO:0042809 "vitamin D receptor binding" evidence=ISS] [GO:0042974
"retinoic acid receptor binding" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0046332 "SMAD binding" evidence=ISS]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=ISS] [GO:0048384 "retinoic acid receptor signaling
pathway" evidence=ISS] [GO:0048385 "regulation of retinoic acid
receptor signaling pathway" evidence=ISS] [GO:0050769 "positive
regulation of neurogenesis" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:0070562
"regulation of vitamin D receptor signaling pathway" evidence=ISS]
[GO:0008024 "positive transcription elongation factor complex b"
evidence=ISS] [GO:0071146 "SMAD3-SMAD4 protein complex"
evidence=ISS] InterPro:IPR004015 InterPro:IPR017862 Pfam:PF02731
GO:GO:0003714 GO:GO:0042771 GO:GO:0045944 GO:GO:0005681
GO:GO:0000122 GO:GO:0003713 GO:GO:0050769 GO:GO:0046332
GO:GO:0030511 GO:GO:0048385 GO:GO:0016363 GO:GO:0048384
GO:GO:0042974 GO:GO:0000398 GO:GO:0051571 KO:K06063
PANTHER:PTHR12096 GO:GO:0048026 GO:GO:0042809 GO:GO:0070562
CTD:22938 HOVERGEN:HBG047516 EMBL:CR860041 RefSeq:NP_001127521.1
UniGene:Pab.18846 PRIDE:Q5R7R9 GeneID:100174597 KEGG:pon:100174597
Uniprot:Q5R7R9
Length = 536
Score = 283 (104.7 bits), Expect = 3.4e-24, P = 3.4e-24
Identities = 62/121 (51%), Positives = 79/121 (65%)
Query: 11 EVTYDQRLFNQEKGMDSGFA--TDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNA 68
EV YDQRLFNQ KGMDSGFA D+ YNVYD+ + ++YRP K+ D DMYG
Sbjct: 404 EVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYG--- 460
Query: 69 DEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEVEK-GGK 127
+ +E +KT+RF PDK F+GS R R+ PV+FE+ DPFGLD+FL E ++ GG
Sbjct: 461 -DDLEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEE-----DPFGLDKFLEEAKQHGGS 514
Query: 128 K 128
K
Sbjct: 515 K 515
>UNIPROTKB|Q1JQE0 [details] [associations]
symbol:SNW1 "SNW domain-containing protein 1" species:9913
"Bos taurus" [GO:0071146 "SMAD3-SMAD4 protein complex"
evidence=ISS] [GO:0016363 "nuclear matrix" evidence=ISS]
[GO:0008024 "positive transcription elongation factor complex b"
evidence=ISS] [GO:0046332 "SMAD binding" evidence=ISS] [GO:0042974
"retinoic acid receptor binding" evidence=ISS] [GO:0042809 "vitamin
D receptor binding" evidence=ISS] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0003713 "transcription
coactivator activity" evidence=ISS] [GO:0070562 "regulation of
vitamin D receptor signaling pathway" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0048385 "regulation of retinoic acid receptor signaling
pathway" evidence=ISS] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=ISS] [GO:0042771 "intrinsic
apoptotic signaling pathway in response to DNA damage by p53 class
mediator" evidence=ISS] [GO:0030511 "positive regulation of
transforming growth factor beta receptor signaling pathway"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0050769
"positive regulation of neurogenesis" evidence=ISS] [GO:0035257
"nuclear hormone receptor binding" evidence=ISS] [GO:0048384
"retinoic acid receptor signaling pathway" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0071300 "cellular
response to retinoic acid" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005112 "Notch binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] InterPro:IPR004015 InterPro:IPR017862 Pfam:PF02731
GO:GO:0003714 GO:GO:0042771 GO:GO:0071300 GO:GO:0045944
GO:GO:0000122 GO:GO:0003713 GO:GO:0050769 GO:GO:0046332
GO:GO:0030511 GO:GO:0048385 GO:GO:0016363 GO:GO:0048384
GO:GO:0042974 GO:GO:0000398 GO:GO:0071013 GO:GO:0051571
eggNOG:NOG295848 GeneTree:ENSGT00390000010423 KO:K06063 OMA:HIYRPSK
PANTHER:PTHR12096 GO:GO:0048026 GO:GO:0042809 GO:GO:0070562
HOGENOM:HOG000160386 EMBL:BC116009 IPI:IPI00760492
RefSeq:NP_001071302.1 UniGene:Bt.42459 STRING:Q1JQE0 PRIDE:Q1JQE0
Ensembl:ENSBTAT00000010697 GeneID:326578 KEGG:bta:326578 CTD:22938
HOVERGEN:HBG047516 InParanoid:Q1JQE0 OrthoDB:EOG4RBQJG
NextBio:20809651 ArrayExpress:Q1JQE0 Uniprot:Q1JQE0
Length = 536
Score = 282 (104.3 bits), Expect = 4.4e-24, P = 4.4e-24
Identities = 62/121 (51%), Positives = 78/121 (64%)
Query: 11 EVTYDQRLFNQEKGMDSGFA--TDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNA 68
EV YDQRLFNQ KGMDSGFA D+ YNVYD+ + +YRP K+ D DMYG
Sbjct: 404 EVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQNIYRPSKNLDKDMYG--- 460
Query: 69 DEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEVEK-GGK 127
+ +E +KT+RF PDK F+GS R R+ PV+FE+ DPFGLD+FL E ++ GG
Sbjct: 461 -DDLEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEE-----DPFGLDKFLEEAKQHGGS 514
Query: 128 K 128
K
Sbjct: 515 K 515
>UNIPROTKB|J9P334 [details] [associations]
symbol:SNW1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR004015 InterPro:IPR017862 Pfam:PF02731 GO:GO:0005681
GO:GO:0000398 GeneTree:ENSGT00390000010423 OMA:HIYRPSK
PANTHER:PTHR12096 EMBL:AAEX03005881 Ensembl:ENSCAFT00000049121
Uniprot:J9P334
Length = 536
Score = 282 (104.3 bits), Expect = 4.4e-24, P = 4.4e-24
Identities = 62/121 (51%), Positives = 78/121 (64%)
Query: 11 EVTYDQRLFNQEKGMDSGFA--TDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNA 68
EV YDQRLFNQ KGMDSGFA D+ YNVYD+ + +YRP K+ D DMYG
Sbjct: 404 EVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQNIYRPSKNLDKDMYG--- 460
Query: 69 DEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEVEK-GGK 127
+ +E +KT+RF PDK F+GS R R+ PV+FE+ DPFGLD+FL E ++ GG
Sbjct: 461 -DDLEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEE-----DPFGLDKFLEEAKQHGGS 514
Query: 128 K 128
K
Sbjct: 515 K 515
>UNIPROTKB|I3L897 [details] [associations]
symbol:SNW1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048384 "retinoic acid receptor signaling
pathway" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0035257 "nuclear hormone receptor binding"
evidence=IEA] [GO:0005112 "Notch binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IEA] InterPro:IPR004015
InterPro:IPR017862 Pfam:PF02731 GO:GO:0045892 GO:GO:0071300
GO:GO:0045944 GO:GO:0048384 GO:GO:0000398 GO:GO:0071013
GeneTree:ENSGT00390000010423 OMA:HIYRPSK PANTHER:PTHR12096
PRIDE:I3L897 Ensembl:ENSSSCT00000025189 Uniprot:I3L897
Length = 536
Score = 282 (104.3 bits), Expect = 4.4e-24, P = 4.4e-24
Identities = 62/121 (51%), Positives = 78/121 (64%)
Query: 11 EVTYDQRLFNQEKGMDSGFA--TDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNA 68
EV YDQRLFNQ KGMDSGFA D+ YNVYD+ + +YRP K+ D DMYG
Sbjct: 404 EVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQNIYRPSKNLDKDMYG--- 460
Query: 69 DEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEVEK-GGK 127
+ +E +KT+RF PDK F+GS R R+ PV+FE+ DPFGLD+FL E ++ GG
Sbjct: 461 -DDLEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEE-----DPFGLDKFLEEAKQHGGS 514
Query: 128 K 128
K
Sbjct: 515 K 515
>RGD|1561926 [details] [associations]
symbol:Snw1 "SNW domain containing 1" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IEA;ISO] [GO:0000785
"chromatin" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=ISO] [GO:0005112 "Notch binding"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0016363 "nuclear matrix" evidence=ISO] [GO:0030511
"positive regulation of transforming growth factor beta receptor
signaling pathway" evidence=ISO] [GO:0035257 "nuclear hormone
receptor binding" evidence=IEA;ISO] [GO:0035914 "skeletal muscle
cell differentiation" evidence=ISO] [GO:0042771 "intrinsic
apoptotic signaling pathway in response to DNA damage by p53 class
mediator" evidence=ISO] [GO:0042809 "vitamin D receptor binding"
evidence=ISO] [GO:0042974 "retinoic acid receptor binding"
evidence=ISO] [GO:0043923 "positive regulation by host of viral
transcription" evidence=ISO] [GO:0044428 "nuclear part"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA;ISO] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0046332 "SMAD binding" evidence=ISO] [GO:0048026 "positive
regulation of mRNA splicing, via spliceosome" evidence=ISO]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IEA;ISO] [GO:0048385 "regulation of retinoic acid receptor
signaling pathway" evidence=ISO] [GO:0050769 "positive regulation
of neurogenesis" evidence=ISO] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=ISO] [GO:0070562 "regulation of
vitamin D receptor signaling pathway" evidence=ISO] [GO:0070564
"positive regulation of vitamin D receptor signaling pathway"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0071300 "cellular response to retinoic acid"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0008024
"positive transcription elongation factor complex b" evidence=ISO]
[GO:0071146 "SMAD3-SMAD4 protein complex" evidence=ISO]
InterPro:IPR004015 InterPro:IPR017862 Pfam:PF02731 RGD:1561926
GO:GO:0045892 GO:GO:0071300 GO:GO:0045944 GO:GO:0000785
GO:GO:0048384 GO:GO:0000398 GO:GO:0071013 EMBL:CH473982
GeneTree:ENSGT00390000010423 KO:K06063 PANTHER:PTHR12096 CTD:22938
OrthoDB:EOG4RBQJG IPI:IPI00476223 RefSeq:NP_001102749.1
UniGene:Rn.220230 Ensembl:ENSRNOT00000057807 GeneID:500695
KEGG:rno:500695 UCSC:RGD:1561926 NextBio:707018 Uniprot:D4A8G7
Length = 536
Score = 281 (104.0 bits), Expect = 5.7e-24, P = 5.7e-24
Identities = 62/121 (51%), Positives = 79/121 (65%)
Query: 11 EVTYDQRLFNQEKGMDSGFA--TDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNA 68
EV YDQRLFNQ KGMDSGFA D+ YNVYD+ + ++YRP K+ D DMYG
Sbjct: 404 EVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYG--- 460
Query: 69 DEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEVEK-GGK 127
+ +E +KT+RF PDK F+GS R R+ PV+FE+ DPFGLD+FL E ++ GG
Sbjct: 461 -DDLETRIKTNRFVPDKEFSGSDGRKRGREGPVQFEE-----DPFGLDKFLEEAKQHGGS 514
Query: 128 K 128
K
Sbjct: 515 K 515
>MGI|MGI:1913604 [details] [associations]
symbol:Snw1 "SNW domain containing 1" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISO] [GO:0000785 "chromatin"
evidence=ISO] [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0003714 "transcription corepressor activity"
evidence=ISO] [GO:0005112 "Notch binding" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016363 "nuclear matrix" evidence=ISO]
[GO:0030511 "positive regulation of transforming growth factor beta
receptor signaling pathway" evidence=ISO] [GO:0035257 "nuclear
hormone receptor binding" evidence=ISO] [GO:0035914 "skeletal
muscle cell differentiation" evidence=IMP] [GO:0042771 "intrinsic
apoptotic signaling pathway in response to DNA damage by p53 class
mediator" evidence=ISO] [GO:0042809 "vitamin D receptor binding"
evidence=ISO] [GO:0042974 "retinoic acid receptor binding"
evidence=ISO] [GO:0043923 "positive regulation by host of viral
transcription" evidence=ISO] [GO:0044428 "nuclear part"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046332 "SMAD binding" evidence=ISO] [GO:0048026 "positive
regulation of mRNA splicing, via spliceosome" evidence=ISO]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=ISO] [GO:0048385 "regulation of retinoic acid receptor
signaling pathway" evidence=ISO] [GO:0050769 "positive regulation
of neurogenesis" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=ISO] [GO:0070562 "regulation of
vitamin D receptor signaling pathway" evidence=ISO] [GO:0070564
"positive regulation of vitamin D receptor signaling pathway"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0071300 "cellular response to retinoic acid"
evidence=ISO;IDA] InterPro:IPR004015 InterPro:IPR017862
Pfam:PF02731 MGI:MGI:1913604 GO:GO:0003714 GO:GO:0042771
GO:GO:0071300 GO:GO:0045944 GO:GO:0005681 GO:GO:0000122
GO:GO:0003713 GO:GO:0050769 GO:GO:0046332 GO:GO:0030511
GO:GO:0048385 GO:GO:0016363 GO:GO:0048384 GO:GO:0035914
GO:GO:0042974 GO:GO:0000398 GO:GO:0051571 eggNOG:NOG295848
KO:K06063 PANTHER:PTHR12096 GO:GO:0048026 GO:GO:0042809
GO:GO:0070562 HOGENOM:HOG000160386 CTD:22938 HOVERGEN:HBG047516
OrthoDB:EOG4RBQJG EMBL:AK012384 EMBL:BY734581 IPI:IPI00317298
RefSeq:NP_079783.2 UniGene:Mm.271174 ProteinModelPortal:Q9CSN1
IntAct:Q9CSN1 MINT:MINT-1346847 STRING:Q9CSN1 PhosphoSite:Q9CSN1
PaxDb:Q9CSN1 PRIDE:Q9CSN1 DNASU:66354 GeneID:66354 KEGG:mmu:66354
UCSC:uc007ojf.1 InParanoid:Q9CSN1 ChiTaRS:SNW1 NextBio:321413
CleanEx:MM_SNW1 Genevestigator:Q9CSN1 GermOnline:ENSMUSG00000021039
Uniprot:Q9CSN1
Length = 536
Score = 280 (103.6 bits), Expect = 7.4e-24, P = 7.4e-24
Identities = 61/121 (50%), Positives = 79/121 (65%)
Query: 11 EVTYDQRLFNQEKGMDSGFA--TDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNA 68
EV YDQRLFNQ KGMDSGFA D+ YNVYD+ + ++YRP K+ D DMYG
Sbjct: 404 EVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYG--- 460
Query: 69 DEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEVEK-GGK 127
+ +E +KT+RF PDK F+GS + R+ PV+FE+ DPFGLD+FL E ++ GG
Sbjct: 461 -DDLEARIKTNRFVPDKEFSGSDRKQRGREGPVQFEE-----DPFGLDKFLEEAKQHGGS 514
Query: 128 K 128
K
Sbjct: 515 K 515
>UNIPROTKB|E2RNF5 [details] [associations]
symbol:SNW1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR004015 InterPro:IPR017862 Pfam:PF02731 GO:GO:0005681
GO:GO:0000398 GeneTree:ENSGT00390000010423 PANTHER:PTHR12096
EMBL:AAEX03007745 Ensembl:ENSCAFT00000000889 OMA:VHINENV
NextBio:20894654 Uniprot:E2RNF5
Length = 536
Score = 276 (102.2 bits), Expect = 2.0e-23, P = 2.0e-23
Identities = 61/121 (50%), Positives = 77/121 (63%)
Query: 11 EVTYDQRLFNQEKGMDSGFA--TDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNA 68
EV YDQ LFNQ KGMDSGFA D+ YNVYD+ + +YRP K+ D DMYG
Sbjct: 404 EVQYDQSLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQNIYRPSKNLDKDMYG--- 460
Query: 69 DEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEVEK-GGK 127
+ +E +KT+RF PDK F+GS R R+ PV+FE+ DPFGLD+FL E ++ GG
Sbjct: 461 -DDLEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEE-----DPFGLDKFLEEAKQHGGS 514
Query: 128 K 128
K
Sbjct: 515 K 515
>UNIPROTKB|F1NNJ3 [details] [associations]
symbol:SNW1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005112 "Notch binding" evidence=IEA] [GO:0035257 "nuclear
hormone receptor binding" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048384 "retinoic acid
receptor signaling pathway" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0071300 "cellular response to
retinoic acid" evidence=IEA] InterPro:IPR004015 InterPro:IPR017862
Pfam:PF02731 GO:GO:0045892 GO:GO:0071300 GO:GO:0045944
GO:GO:0048384 GO:GO:0000398 GO:GO:0071013
GeneTree:ENSGT00390000010423 OMA:HIYRPSK PANTHER:PTHR12096
EMBL:AADN02003502 IPI:IPI00595301 Ensembl:ENSGALT00000017099
Uniprot:F1NNJ3
Length = 538
Score = 271 (100.5 bits), Expect = 7.2e-23, P = 7.2e-23
Identities = 62/123 (50%), Positives = 78/123 (63%)
Query: 11 EVTYDQRLFNQEKGMDSGFA--TDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNA 68
EV YDQRLFNQ KGMDSGFA D+ YNVYD+ + + +YRP K+ D DMYG
Sbjct: 404 EVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQPWRSGKDMAQNIYRPSKNVDKDMYG--- 460
Query: 69 DEQMEKIMKTDRFKPDKGFAGSSE--RSGPRDRPVEFEKEAEEADPFGLDEFLTEVEK-G 125
+ +E +KT+RF PDK F+ S R RD PV+FE+ DPFGLD+FL E ++ G
Sbjct: 461 -DDLEARIKTNRFVPDKEFSNSDRNTRGRGRDGPVQFEE-----DPFGLDKFLEEAKQHG 514
Query: 126 GKK 128
G K
Sbjct: 515 GSK 517
>WB|WBGene00004806 [details] [associations]
symbol:skp-1 species:6239 "Caenorhabditis elegans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0010468 "regulation of gene expression"
evidence=IMP] [GO:0042303 "molting cycle" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040025 "vulval development"
evidence=IMP] [GO:0060065 "uterus development" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP]
InterPro:IPR004015 InterPro:IPR017862 Pfam:PF02731 GO:GO:0009792
GO:GO:0040007 GO:GO:0018991 GO:GO:0018996 GO:GO:0040011
GO:GO:0005681 GO:GO:0040035 GO:GO:0007281 GO:GO:0040025
GO:GO:0010468 GO:GO:0000398 eggNOG:NOG295848
GeneTree:ENSGT00390000010423 KO:K06063 OMA:HIYRPSK
PANTHER:PTHR12096 GO:GO:0060065 HOGENOM:HOG000160386 EMBL:Z74045
PIR:T25379 RefSeq:NP_505950.1 ProteinModelPortal:Q22836
DIP:DIP-26404N IntAct:Q22836 MINT:MINT-250943 STRING:Q22836
PaxDb:Q22836 PRIDE:Q22836 EnsemblMetazoa:T27F2.1.1
EnsemblMetazoa:T27F2.1.2 GeneID:179598 KEGG:cel:CELE_T27F2.1
CTD:179598 WormBase:T27F2.1 InParanoid:Q22836 NextBio:906094
Uniprot:Q22836
Length = 535
Score = 231 (86.4 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 59/149 (39%), Positives = 80/149 (53%)
Query: 1 MASTGAARGGEVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDAD 60
+ T R GE +DQRLF++ +G+DSG DD YN YD +YRP K+ D
Sbjct: 399 LPDTNQKRTGEPQFDQRLFDKTQGLDSGAMDDDTYNPYDAAWRGGDSVQQHVYRPSKNLD 458
Query: 61 DDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLT 120
+D+YGG+ D+ +E+ +RF DKGF+G+ E S PV+FEK+ D FGL L
Sbjct: 459 NDVYGGDLDKIIEQ---KNRFVADKGFSGA-EGSSRGSGPVQFEKDQ---DVFGLSS-LF 510
Query: 121 EVEKGGKKALDKVGTGGTMRASAGSSMRD 149
E K K+ G GG R + S RD
Sbjct: 511 EHTKEKKRG----GDGGDSRGESKRSRRD 535
>UNIPROTKB|Q22836 [details] [associations]
symbol:T27F2.1 "Uncharacterized protein T27F2.1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR004015 InterPro:IPR017862 Pfam:PF02731
GO:GO:0009792 GO:GO:0040007 GO:GO:0018991 GO:GO:0018996
GO:GO:0040011 GO:GO:0005681 GO:GO:0040035 GO:GO:0007281
GO:GO:0040025 GO:GO:0010468 GO:GO:0000398 eggNOG:NOG295848
GeneTree:ENSGT00390000010423 KO:K06063 OMA:HIYRPSK
PANTHER:PTHR12096 GO:GO:0060065 HOGENOM:HOG000160386 EMBL:Z74045
PIR:T25379 RefSeq:NP_505950.1 ProteinModelPortal:Q22836
DIP:DIP-26404N IntAct:Q22836 MINT:MINT-250943 STRING:Q22836
PaxDb:Q22836 PRIDE:Q22836 EnsemblMetazoa:T27F2.1.1
EnsemblMetazoa:T27F2.1.2 GeneID:179598 KEGG:cel:CELE_T27F2.1
CTD:179598 WormBase:T27F2.1 InParanoid:Q22836 NextBio:906094
Uniprot:Q22836
Length = 535
Score = 231 (86.4 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 59/149 (39%), Positives = 80/149 (53%)
Query: 1 MASTGAARGGEVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDAD 60
+ T R GE +DQRLF++ +G+DSG DD YN YD +YRP K+ D
Sbjct: 399 LPDTNQKRTGEPQFDQRLFDKTQGLDSGAMDDDTYNPYDAAWRGGDSVQQHVYRPSKNLD 458
Query: 61 DDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLT 120
+D+YGG+ D+ +E+ +RF DKGF+G+ E S PV+FEK+ D FGL L
Sbjct: 459 NDVYGGDLDKIIEQ---KNRFVADKGFSGA-EGSSRGSGPVQFEKDQ---DVFGLSS-LF 510
Query: 121 EVEKGGKKALDKVGTGGTMRASAGSSMRD 149
E K K+ G GG R + S RD
Sbjct: 511 EHTKEKKRG----GDGGDSRGESKRSRRD 535
>ASPGD|ASPL0000009849 [details] [associations]
symbol:AN8180 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0044732 "mitotic spindle pole body"
evidence=IEA] InterPro:IPR004015 InterPro:IPR017862 Pfam:PF02731
GO:GO:0005681 EMBL:BN001302 EMBL:AACD01000141 GO:GO:0000398
eggNOG:NOG295848 KO:K06063 OMA:HIYRPSK PANTHER:PTHR12096
RefSeq:XP_681449.1 STRING:Q5AU50 EnsemblFungi:CADANIAT00004222
GeneID:2868906 KEGG:ani:AN8180.2 HOGENOM:HOG000160386
OrthoDB:EOG4FJCK5 Uniprot:Q5AU50
Length = 583
Score = 226 (84.6 bits), Expect = 6.9e-18, P = 6.9e-18
Identities = 61/160 (38%), Positives = 87/160 (54%)
Query: 8 RGGEVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDAD-DDMYGG 66
+ E +D RLFNQ G+ +GF D N YDK LF AQ ++++YRPK AD DD
Sbjct: 439 QSSETMWDSRLFNQTSGLSTGFNED---NPYDKPLFAAQDAINSIYRPKPQADFDDE--A 493
Query: 67 NADEQMEKIMKTDRF----KPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEV 122
+A+ +M KI K++RF + +GF G+++ R PV+FEK+ ADPFG+D + +V
Sbjct: 494 DAEGEMSKIQKSNRFEVLGRAKEGFRGAADAE-ERSGPVQFEKDT--ADPFGIDSMIADV 550
Query: 123 EKGGKKALDKVGTGGTMRASAGSSMRDDYGGSGRSRIGFE 162
GG G G R + D GS R+R+ E
Sbjct: 551 T-GG------AGGAGQKRYGIQEA-EPDSRGSKRARVDEE 582
>UNIPROTKB|G4N190 [details] [associations]
symbol:MGG_07472 "Pre-mRNA-processing protein 45"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR004015 InterPro:IPR017862 Pfam:PF02731
EMBL:CM001233 GO:GO:0005681 GO:GO:0000398 KO:K06063
PANTHER:PTHR12096 RefSeq:XP_003711376.1 EnsemblFungi:MGG_07472T0
GeneID:2683392 KEGG:mgr:MGG_07472 Uniprot:G4N190
Length = 575
Score = 223 (83.6 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 50/120 (41%), Positives = 70/120 (58%)
Query: 8 RGGEVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGN 67
+ E YD RLFNQ G + G D N YDK LF Q +S++YRP+ + DD+
Sbjct: 432 QSSEGMYDSRLFNQSSGFEGGINED---NPYDKPLFAVQDAISSIYRPRANNDDEDEAAG 488
Query: 68 ADEQMEKIMKTDRFKPDKG---FAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEVEK 124
D +M KI K R+ G F+G+ + R+ PV+FEK+A ADPF +D+FL+EVE+
Sbjct: 489 -DAEMAKIQKASRYGEVLGRGTFSGAGDVEA-REGPVQFEKDAAGADPFNVDKFLSEVEQ 546
>DICTYBASE|DDB_G0269188 [details] [associations]
symbol:snwA "nuclear receptor coactivator NC0A-62"
species:44689 "Dictyostelium discoideum" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR004015 InterPro:IPR017862 Pfam:PF02731
dictyBase:DDB_G0269188 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0005681 GO:GO:0000398 eggNOG:NOG295848 KO:K06063
PANTHER:PTHR12096 EMBL:U43887 RefSeq:XP_646059.1 IntAct:P54705
STRING:P54705 EnsemblProtists:DDB0191206 GeneID:8617007
KEGG:ddi:DDB_G0269188 Uniprot:P54705
Length = 685
Score = 191 (72.3 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 46/118 (38%), Positives = 68/118 (57%)
Query: 14 YDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNADEQME 73
YDQRLFNQ + + SGF DD YNVY K LF + +++YRPK + +D+ ++
Sbjct: 573 YDQRLFNQSESLTSGFGNDDSYNVYSKPLFGGAVS-NSIYRPKSNQEDNT-------SIQ 624
Query: 74 KIMKTDRF------------KPDKGFAGSSERSGPRDRPVEFEKEAEEAD-PFGLDEF 118
++ RF +P+K F+G+ +RS R PV FEKE +++D PFG D+F
Sbjct: 625 DVLSNSRFGKEGGSGSGGVPRPNKEFSGT-DRSKDRTGPVAFEKEKKKSDDPFGFDDF 681
>POMBASE|SPCC188.11 [details] [associations]
symbol:prp45 "splicing factor Prp45" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IPI] [GO:0044732 "mitotic spindle
pole body" evidence=IDA] [GO:0045292 "mRNA cis splicing, via
spliceosome" evidence=IPI] InterPro:IPR004015 InterPro:IPR017862
Pfam:PF02731 PomBase:SPCC188.11 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
eggNOG:NOG295848 KO:K06063 PANTHER:PTHR12096 GO:GO:0045292
HOGENOM:HOG000160386 OrthoDB:EOG4FJCK5 PIR:T39128
RefSeq:NP_588213.1 IntAct:Q09882 STRING:Q09882
EnsemblFungi:SPCC188.11.1 GeneID:2538988 KEGG:spo:SPCC188.11
OMA:IPPYGQR NextBio:20800163 Uniprot:Q09882
Length = 557
Score = 188 (71.2 bits), Expect = 8.0e-14, P = 8.0e-14
Identities = 49/112 (43%), Positives = 61/112 (54%)
Query: 15 DQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNADEQMEK 74
D RLFNQ G+ SGF +D YNVYDK + A P+ STLYRP + +A ++E+
Sbjct: 448 DSRLFNQASGLGSGFQDEDSYNVYDKP-WRAAPS-STLYRPGATLSRQV---DASAELER 502
Query: 75 IMKTDRF----KPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEV 122
I R+ K F GS E R PV FEK+ ADPFG+D FL V
Sbjct: 503 ITSESRYDVLGNAHKKFKGSDEVVESRAGPVTFEKDI--ADPFGVDTFLNNV 552
>UNIPROTKB|G3V3A4 [details] [associations]
symbol:SNW1 "SNW domain-containing protein 1" species:9606
"Homo sapiens" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR004015 InterPro:IPR017862 Pfam:PF02731
GO:GO:0005634 GO:GO:0005681 GO:GO:0000398 OMA:HIYRPSK
PANTHER:PTHR12096 EMBL:AC008372 HGNC:HGNC:16696
Ensembl:ENST00000555761 ArrayExpress:G3V3A4 Bgee:G3V3A4
Uniprot:G3V3A4
Length = 571
Score = 172 (65.6 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 37/72 (51%), Positives = 47/72 (65%)
Query: 11 EVTYDQRLFNQEKGMDSGFA--TDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNA 68
EV YDQRLFNQ KGMDSGFA D+ YNVYD+ + ++YRP K+ D DMYG
Sbjct: 404 EVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYG--- 460
Query: 69 DEQMEKIMKTDR 80
+ +E +KT+R
Sbjct: 461 -DDLEARIKTNR 471
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.133 0.378 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 165 165 0.00093 107 3 11 23 0.48 32
30 0.45 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 485 (52 KB)
Total size of DFA: 119 KB (2080 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.51u 0.11s 18.62t Elapsed: 00:00:02
Total cpu time: 18.51u 0.11s 18.62t Elapsed: 00:00:02
Start: Thu May 9 21:14:38 2013 End: Thu May 9 21:14:40 2013