Query 042216
Match_columns 767
No_of_seqs 567 out of 3172
Neff 8.6
Searched_HMMs 46136
Date Fri Mar 29 04:01:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042216.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042216hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF12819 Malectin_like: Carboh 100.0 2.7E-60 5.7E-65 511.8 30.1 323 15-379 1-347 (347)
2 PLN03150 hypothetical protein; 100.0 7.3E-57 1.6E-61 521.8 31.3 333 5-381 18-364 (623)
3 KOG1187 Serine/threonine prote 100.0 1.2E-56 2.7E-61 485.3 28.0 291 461-753 61-354 (361)
4 KOG0192 Tyrosine kinase specif 100.0 7.9E-47 1.7E-51 405.9 23.8 254 481-755 47-307 (362)
5 KOG0197 Tyrosine kinases [Sign 100.0 4E-47 8.6E-52 406.1 18.8 253 479-753 210-463 (468)
6 KOG1026 Nerve growth factor re 100.0 9.9E-46 2.2E-50 413.3 19.9 261 475-754 486-765 (774)
7 KOG0581 Mitogen-activated prot 100.0 4E-45 8.6E-50 373.8 19.5 251 477-746 81-334 (364)
8 KOG0196 Tyrosine kinase, EPH ( 100.0 9E-45 1.9E-49 396.8 10.6 273 463-755 608-895 (996)
9 KOG0595 Serine/threonine-prote 100.0 1.7E-43 3.7E-48 364.4 19.1 203 474-684 9-219 (429)
10 KOG0575 Polo-like serine/threo 100.0 5.6E-43 1.2E-47 377.4 21.1 248 475-746 18-268 (592)
11 KOG0591 NIMA (never in mitosis 100.0 2.1E-43 4.5E-48 345.8 11.3 256 475-749 19-283 (375)
12 KOG0615 Serine/threonine prote 100.0 1.2E-42 2.7E-47 357.2 14.6 253 474-746 171-436 (475)
13 KOG0193 Serine/threonine prote 100.0 1.2E-42 2.6E-47 372.6 14.4 266 469-754 386-656 (678)
14 KOG1094 Discoidin domain recep 100.0 3E-41 6.5E-46 358.4 23.4 263 476-751 539-804 (807)
15 KOG0598 Ribosomal protein S6 k 100.0 2.3E-41 4.9E-46 346.3 18.6 243 474-739 24-269 (357)
16 KOG1095 Protein tyrosine kinas 100.0 1.5E-41 3.2E-46 393.1 19.3 261 476-755 693-965 (1025)
17 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.2E-40 4.9E-45 360.5 22.3 262 474-753 6-336 (338)
18 KOG0593 Predicted protein kina 100.0 2.9E-41 6.3E-46 334.0 13.7 265 475-746 2-283 (396)
19 KOG0194 Protein tyrosine kinas 100.0 6.6E-41 1.4E-45 364.2 15.4 254 481-755 163-424 (474)
20 KOG0198 MEKK and related serin 100.0 2.2E-40 4.9E-45 345.4 18.1 256 476-749 18-278 (313)
21 PLN00113 leucine-rich repeat r 100.0 5.7E-39 1.2E-43 396.7 33.4 266 474-756 689-956 (968)
22 KOG4721 Serine/threonine prote 100.0 4.9E-41 1.1E-45 355.1 12.2 254 463-755 119-372 (904)
23 KOG4278 Protein tyrosine kinas 100.0 1.3E-40 2.8E-45 354.1 13.5 260 474-754 266-526 (1157)
24 KOG0582 Ste20-like serine/thre 100.0 1.4E-39 3E-44 337.7 20.8 263 474-746 25-292 (516)
25 KOG0578 p21-activated serine/t 100.0 3.8E-40 8.1E-45 352.9 16.7 249 476-746 274-522 (550)
26 KOG0600 Cdc2-related protein k 100.0 6.3E-40 1.4E-44 345.2 17.9 266 475-746 117-399 (560)
27 PHA02988 hypothetical protein; 100.0 6.6E-39 1.4E-43 340.0 24.8 252 476-753 21-281 (283)
28 KOG0597 Serine-threonine prote 100.0 5.4E-40 1.2E-44 347.7 15.4 247 475-746 2-250 (808)
29 PF07714 Pkinase_Tyr: Protein 100.0 2.2E-39 4.7E-44 339.2 19.3 251 479-748 3-259 (259)
30 cd05104 PTKc_Kit Catalytic dom 100.0 3.2E-39 7E-44 356.1 20.9 259 475-751 35-374 (375)
31 KOG0592 3-phosphoinositide-dep 100.0 3.3E-39 7.2E-44 342.3 18.1 253 473-747 71-338 (604)
32 cd05096 PTKc_DDR1 Catalytic do 100.0 1.3E-38 2.8E-43 341.3 23.1 263 475-749 5-303 (304)
33 cd05106 PTKc_CSF-1R Catalytic 100.0 4.9E-39 1.1E-43 354.4 20.2 260 475-752 38-373 (374)
34 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.9E-38 4.2E-43 333.2 22.9 256 475-751 5-265 (266)
35 cd05048 PTKc_Ror Catalytic Dom 100.0 1.1E-38 2.3E-43 338.0 20.9 257 475-750 5-282 (283)
36 KOG0659 Cdk activating kinase 100.0 1.1E-38 2.4E-43 311.0 18.3 265 476-747 3-281 (318)
37 cd05631 STKc_GRK4 Catalytic do 100.0 2.4E-38 5.1E-43 336.2 22.3 251 477-746 2-260 (285)
38 KOG3653 Transforming growth fa 100.0 2.9E-38 6.3E-43 330.1 22.4 269 476-756 211-508 (534)
39 cd05052 PTKc_Abl Catalytic dom 100.0 4.7E-38 1E-42 329.6 23.7 256 475-751 6-262 (263)
40 KOG0616 cAMP-dependent protein 100.0 2E-38 4.4E-43 313.5 17.9 237 475-738 44-283 (355)
41 KOG0661 MAPK related serine/th 100.0 2.2E-39 4.7E-44 338.8 11.6 265 473-747 8-291 (538)
42 cd05108 PTKc_EGFR Catalytic do 100.0 5.8E-38 1.3E-42 338.3 23.1 260 475-755 7-272 (316)
43 KOG4257 Focal adhesion tyrosin 100.0 9.7E-39 2.1E-43 340.9 16.3 258 476-755 390-653 (974)
44 KOG0583 Serine/threonine prote 100.0 6.9E-38 1.5E-42 339.9 23.1 249 473-745 15-273 (370)
45 cd05148 PTKc_Srm_Brk Catalytic 100.0 4.7E-38 1E-42 328.8 20.7 257 473-751 4-261 (261)
46 cd05033 PTKc_EphR Catalytic do 100.0 1.4E-37 3E-42 326.5 23.7 258 474-751 3-265 (266)
47 cd05105 PTKc_PDGFR_alpha Catal 100.0 7.4E-38 1.6E-42 346.8 21.9 262 474-753 36-399 (400)
48 KOG0201 Serine/threonine prote 100.0 4.5E-39 9.9E-44 334.1 11.2 248 476-746 14-262 (467)
49 cd05072 PTKc_Lyn Catalytic dom 100.0 1.5E-37 3.4E-42 325.1 22.8 256 474-751 5-261 (261)
50 KOG1025 Epidermal growth facto 100.0 2.1E-39 4.6E-44 355.5 8.8 258 477-755 698-961 (1177)
51 cd05094 PTKc_TrkC Catalytic do 100.0 1.9E-37 4.1E-42 330.2 23.5 261 475-754 5-285 (291)
52 cd05093 PTKc_TrkB Catalytic do 100.0 2.2E-37 4.8E-42 329.1 23.9 261 475-754 5-282 (288)
53 KOG0694 Serine/threonine prote 100.0 5.2E-38 1.1E-42 342.5 18.9 242 473-741 366-613 (694)
54 cd05111 PTK_HER3 Pseudokinase 100.0 3E-37 6.6E-42 326.6 24.2 260 475-755 7-272 (279)
55 cd05612 STKc_PRKX_like Catalyt 100.0 5.2E-38 1.1E-42 334.6 18.3 246 475-747 1-254 (291)
56 cd06649 PKc_MEK2 Catalytic dom 100.0 2.1E-37 4.6E-42 336.1 23.2 263 474-747 4-301 (331)
57 cd05049 PTKc_Trk Catalytic dom 100.0 1.8E-37 3.8E-42 328.0 21.9 256 475-749 5-279 (280)
58 cd05068 PTKc_Frk_like Catalyti 100.0 1.8E-37 4E-42 324.6 21.7 256 474-751 5-261 (261)
59 cd07848 STKc_CDKL5 Catalytic d 100.0 1.7E-37 3.8E-42 329.5 21.8 266 475-746 1-283 (287)
60 cd05062 PTKc_IGF-1R Catalytic 100.0 2.1E-37 4.6E-42 327.2 22.2 258 473-749 4-276 (277)
61 PTZ00267 NIMA-related protein 100.0 2.3E-37 5E-42 351.7 23.9 252 476-746 68-322 (478)
62 cd05054 PTKc_VEGFR Catalytic d 100.0 1.4E-37 3E-42 338.2 21.1 261 475-753 7-335 (337)
63 cd05053 PTKc_FGFR Catalytic do 100.0 9.6E-38 2.1E-42 332.6 19.4 261 473-752 10-292 (293)
64 KOG0199 ACK and related non-re 100.0 2.9E-38 6.2E-43 341.2 15.3 250 479-748 114-369 (1039)
65 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 8.2E-38 1.8E-42 339.7 19.0 254 475-747 1-257 (333)
66 cd05571 STKc_PKB Catalytic dom 100.0 6.3E-38 1.4E-42 339.1 18.0 241 482-746 2-250 (323)
67 cd05045 PTKc_RET Catalytic dom 100.0 3E-37 6.5E-42 328.4 22.4 259 476-753 1-288 (290)
68 PTZ00263 protein kinase A cata 100.0 7.9E-38 1.7E-42 339.2 18.2 245 475-746 18-270 (329)
69 cd05114 PTKc_Tec_Rlk Catalytic 100.0 4.9E-37 1.1E-41 320.4 23.5 251 475-748 4-255 (256)
70 cd05090 PTKc_Ror1 Catalytic do 100.0 2.5E-37 5.5E-42 327.7 21.5 257 475-750 5-282 (283)
71 cd05084 PTKc_Fes Catalytic dom 100.0 4.1E-37 9E-42 320.1 22.3 248 482-749 2-251 (252)
72 cd07871 STKc_PCTAIRE3 Catalyti 100.0 3.4E-37 7.4E-42 327.8 22.0 265 475-746 5-284 (288)
73 cd07862 STKc_CDK6 Catalytic do 100.0 3.7E-37 7.9E-42 327.6 21.3 261 476-746 2-286 (290)
74 cd05055 PTKc_PDGFR Catalytic d 100.0 4.5E-37 9.7E-42 329.2 22.0 260 474-751 34-301 (302)
75 cd05585 STKc_YPK1_like Catalyt 100.0 1.4E-37 2.9E-42 334.8 18.0 240 483-746 1-246 (312)
76 cd05107 PTKc_PDGFR_beta Cataly 100.0 5.4E-37 1.2E-41 339.8 23.1 261 474-752 36-400 (401)
77 cd05036 PTKc_ALK_LTK Catalytic 100.0 6.9E-37 1.5E-41 323.4 22.8 258 473-749 4-276 (277)
78 cd05595 STKc_PKB_beta Catalyti 100.0 1.9E-37 4.2E-42 335.2 18.9 241 482-746 2-250 (323)
79 cd05109 PTKc_HER2 Catalytic do 100.0 9E-37 2E-41 322.8 23.6 261 474-755 6-272 (279)
80 cd05593 STKc_PKB_gamma Catalyt 100.0 2.6E-37 5.6E-42 334.9 19.5 242 482-747 2-251 (328)
81 KOG0605 NDR and related serine 100.0 2.4E-37 5.3E-42 328.7 18.7 253 473-745 139-443 (550)
82 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.3E-36 2.7E-41 319.5 24.0 258 474-751 4-267 (268)
83 cd05075 PTKc_Axl Catalytic dom 100.0 1.2E-36 2.5E-41 320.4 23.5 255 478-751 2-271 (272)
84 cd05091 PTKc_Ror2 Catalytic do 100.0 5.3E-37 1.2E-41 325.1 21.0 256 476-750 6-282 (283)
85 cd05035 PTKc_Axl_like Catalyti 100.0 1.1E-36 2.5E-41 320.3 23.4 256 477-751 1-272 (273)
86 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 4.4E-37 9.6E-42 325.9 20.4 264 475-751 4-283 (284)
87 cd05089 PTKc_Tie1 Catalytic do 100.0 6.1E-37 1.3E-41 327.3 21.5 259 475-755 2-279 (297)
88 cd05092 PTKc_TrkA Catalytic do 100.0 7.2E-37 1.6E-41 323.8 21.8 256 475-749 5-279 (280)
89 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3.6E-37 7.8E-42 335.1 20.0 266 476-747 1-290 (338)
90 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.2E-36 2.7E-41 317.6 23.3 252 475-749 4-256 (256)
91 PTZ00283 serine/threonine prot 100.0 5.5E-37 1.2E-41 349.0 22.2 258 471-747 28-297 (496)
92 KOG0663 Protein kinase PITSLRE 100.0 2.7E-37 5.8E-42 309.8 17.2 265 475-746 76-360 (419)
93 cd05032 PTKc_InsR_like Catalyt 100.0 8.9E-37 1.9E-41 322.1 22.1 257 474-749 5-276 (277)
94 cd05098 PTKc_FGFR1 Catalytic d 100.0 8.3E-37 1.8E-41 327.9 22.1 262 475-755 18-303 (307)
95 cd06650 PKc_MEK1 Catalytic dom 100.0 5.9E-37 1.3E-41 332.8 21.1 261 474-746 4-298 (333)
96 KOG0585 Ca2+/calmodulin-depend 100.0 3.3E-37 7.2E-42 321.8 18.2 255 472-747 94-372 (576)
97 PLN00034 mitogen-activated pro 100.0 6.1E-37 1.3E-41 335.6 21.3 248 476-747 75-328 (353)
98 KOG0580 Serine/threonine prote 100.0 7E-38 1.5E-42 301.3 12.1 248 475-746 22-272 (281)
99 KOG1989 ARK protein kinase fam 100.0 5.1E-37 1.1E-41 345.4 20.9 260 476-755 38-315 (738)
100 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.3E-36 2.9E-41 325.8 23.3 263 474-755 14-300 (304)
101 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 9.4E-37 2E-41 323.3 21.8 269 477-752 6-282 (283)
102 cd05605 STKc_GRK4_like Catalyt 100.0 1E-36 2.3E-41 323.5 22.0 253 476-747 1-261 (285)
103 cd08529 STKc_FA2-like Catalyti 100.0 1.5E-36 3.2E-41 316.2 22.5 251 476-747 1-253 (256)
104 PTZ00426 cAMP-dependent protei 100.0 3.4E-37 7.4E-42 335.3 18.4 246 475-747 30-284 (340)
105 cd05088 PTKc_Tie2 Catalytic do 100.0 7.3E-37 1.6E-41 327.7 20.7 261 474-756 6-285 (303)
106 cd05043 PTK_Ryk Pseudokinase d 100.0 1.3E-36 2.9E-41 321.6 22.4 261 474-753 5-278 (280)
107 cd05051 PTKc_DDR Catalytic dom 100.0 1.5E-36 3.3E-41 323.7 22.9 263 475-749 5-295 (296)
108 cd05071 PTKc_Src Catalytic dom 100.0 2.6E-36 5.5E-41 316.4 24.0 255 475-752 6-261 (262)
109 KOG0589 Serine/threonine prote 100.0 1.9E-37 4.2E-42 330.9 15.5 252 475-747 4-258 (426)
110 cd05059 PTKc_Tec_like Catalyti 100.0 2.1E-36 4.5E-41 315.8 23.0 251 475-748 4-255 (256)
111 cd05097 PTKc_DDR_like Catalyti 100.0 1.4E-36 3E-41 324.2 21.8 263 475-749 5-294 (295)
112 KOG0588 Serine/threonine prote 100.0 4.4E-37 9.6E-42 332.3 17.8 246 477-747 14-263 (786)
113 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 3E-36 6.6E-41 315.2 23.7 253 475-750 6-259 (260)
114 cd05588 STKc_aPKC Catalytic do 100.0 1.1E-36 2.3E-41 330.3 20.9 247 482-745 2-260 (329)
115 KOG2345 Serine/threonine prote 100.0 2.5E-37 5.5E-42 298.6 14.0 265 473-752 19-301 (302)
116 cd05039 PTKc_Csk_like Catalyti 100.0 3.2E-36 6.9E-41 314.2 23.5 251 474-751 5-256 (256)
117 cd05061 PTKc_InsR Catalytic do 100.0 3E-36 6.6E-41 320.4 23.7 261 473-752 4-279 (288)
118 cd08228 STKc_Nek6 Catalytic do 100.0 2.2E-36 4.8E-41 317.3 22.1 259 475-751 2-265 (267)
119 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4.3E-36 9.4E-41 321.7 24.8 264 474-746 4-287 (303)
120 cd05047 PTKc_Tie Catalytic dom 100.0 2E-36 4.3E-41 318.6 21.7 250 482-753 2-270 (270)
121 cd05116 PTKc_Syk Catalytic dom 100.0 2.6E-36 5.6E-41 315.3 22.3 248 482-751 2-255 (257)
122 cd05618 STKc_aPKC_iota Catalyt 100.0 1.3E-36 2.9E-41 329.5 20.8 247 482-745 2-260 (329)
123 cd05065 PTKc_EphR_B Catalytic 100.0 2.8E-36 6E-41 317.2 22.6 256 476-751 5-268 (269)
124 cd05115 PTKc_Zap-70 Catalytic 100.0 4.6E-36 9.9E-41 313.6 24.0 249 482-751 2-255 (257)
125 cd05594 STKc_PKB_alpha Catalyt 100.0 4.6E-37 1E-41 332.6 17.1 243 482-747 2-252 (325)
126 cd08229 STKc_Nek7 Catalytic do 100.0 1.8E-36 3.9E-41 318.0 20.9 260 475-752 2-266 (267)
127 cd05099 PTKc_FGFR4 Catalytic d 100.0 4.8E-36 1E-40 323.1 24.6 262 475-755 12-297 (314)
128 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.7E-36 3.7E-41 330.7 21.4 261 475-753 7-341 (343)
129 cd05592 STKc_nPKC_theta_delta 100.0 1.3E-36 2.7E-41 327.8 20.0 240 482-745 2-246 (316)
130 cd05626 STKc_LATS2 Catalytic d 100.0 1.5E-36 3.3E-41 335.8 21.2 254 476-747 2-305 (381)
131 cd05628 STKc_NDR1 Catalytic do 100.0 2.1E-36 4.6E-41 332.5 22.1 255 475-747 1-293 (363)
132 cd05587 STKc_cPKC Catalytic do 100.0 1.5E-36 3.3E-41 328.5 20.5 242 476-741 1-246 (324)
133 cd05082 PTKc_Csk Catalytic dom 100.0 2.9E-36 6.4E-41 314.6 22.0 249 475-751 6-256 (256)
134 cd05589 STKc_PKN Catalytic dom 100.0 1.8E-36 3.8E-41 327.9 20.9 245 477-746 1-256 (324)
135 cd05067 PTKc_Lck_Blk Catalytic 100.0 5.2E-36 1.1E-40 313.4 23.7 254 474-750 5-259 (260)
136 cd05573 STKc_ROCK_NDR_like Cat 100.0 7.3E-37 1.6E-41 334.5 17.5 254 475-747 1-285 (350)
137 cd05050 PTKc_Musk Catalytic do 100.0 3.5E-36 7.6E-41 319.8 22.1 257 474-749 4-287 (288)
138 cd05069 PTKc_Yes Catalytic dom 100.0 9.9E-36 2.2E-40 311.4 25.1 253 475-750 6-259 (260)
139 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 6.3E-36 1.4E-40 313.6 23.6 259 475-752 2-266 (267)
140 cd06637 STKc_TNIK Catalytic do 100.0 2.7E-36 5.9E-41 317.5 20.8 254 472-746 3-268 (272)
141 cd05608 STKc_GRK1 Catalytic do 100.0 3.6E-36 7.8E-41 318.5 21.8 246 483-746 1-256 (280)
142 cd05616 STKc_cPKC_beta Catalyt 100.0 2.4E-36 5.3E-41 326.7 20.8 242 476-741 1-246 (323)
143 cd05607 STKc_GRK7 Catalytic do 100.0 2.2E-36 4.7E-41 319.7 19.9 247 483-747 1-250 (277)
144 cd00192 PTKc Catalytic domain 100.0 6.2E-36 1.3E-40 312.0 23.1 249 482-749 2-262 (262)
145 cd05060 PTKc_Syk_like Catalyti 100.0 6.6E-36 1.4E-40 312.1 23.3 249 482-752 2-256 (257)
146 cd05584 STKc_p70S6K Catalytic 100.0 1.6E-36 3.5E-41 328.1 19.2 242 481-746 2-255 (323)
147 cd05590 STKc_nPKC_eta Catalyti 100.0 1.6E-36 3.5E-41 327.6 19.1 236 482-741 2-241 (320)
148 cd05057 PTKc_EGFR_like Catalyt 100.0 8.6E-36 1.9E-40 315.3 24.1 260 475-755 7-272 (279)
149 cd05617 STKc_aPKC_zeta Catalyt 100.0 3.2E-36 7E-41 326.2 21.2 243 482-741 2-248 (327)
150 cd05591 STKc_nPKC_epsilon Cata 100.0 1.6E-36 3.5E-41 327.8 18.7 242 482-747 2-254 (321)
151 cd05066 PTKc_EphR_A Catalytic 100.0 7E-36 1.5E-40 313.9 22.9 257 475-751 4-266 (267)
152 cd05599 STKc_NDR_like Catalyti 100.0 1.3E-36 2.8E-41 334.5 18.1 253 475-746 1-295 (364)
153 cd05034 PTKc_Src_like Catalyti 100.0 1E-35 2.2E-40 311.2 24.0 255 474-750 5-260 (261)
154 cd06624 STKc_ASK Catalytic dom 100.0 6.2E-36 1.3E-40 314.3 22.5 257 470-746 3-264 (268)
155 cd05095 PTKc_DDR2 Catalytic do 100.0 6E-36 1.3E-40 319.4 22.5 263 475-749 5-295 (296)
156 cd05570 STKc_PKC Catalytic dom 100.0 2.3E-36 5E-41 326.1 19.4 241 482-746 2-251 (318)
157 cd06646 STKc_MAP4K5 Catalytic 100.0 5.5E-36 1.2E-40 314.5 21.5 255 475-748 9-266 (267)
158 cd05619 STKc_nPKC_theta Cataly 100.0 3.2E-36 7E-41 324.6 20.2 240 482-745 2-246 (316)
159 cd06625 STKc_MEKK3_like Cataly 100.0 7E-36 1.5E-40 312.7 22.1 253 475-747 2-260 (263)
160 cd05614 STKc_MSK2_N N-terminal 100.0 4.3E-36 9.4E-41 326.0 21.1 252 476-746 1-266 (332)
161 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2.3E-36 5E-41 319.9 18.5 263 475-751 4-283 (284)
162 PRK13184 pknD serine/threonine 100.0 7.6E-36 1.6E-40 348.6 24.5 264 475-755 2-294 (932)
163 PHA03212 serine/threonine kina 100.0 8.5E-36 1.8E-40 330.0 23.7 259 475-746 92-375 (391)
164 cd05085 PTKc_Fer Catalytic dom 100.0 1.2E-35 2.5E-40 308.7 23.2 246 482-749 2-249 (250)
165 cd07853 STKc_NLK Catalytic dom 100.0 6.3E-36 1.4E-40 330.0 22.5 264 476-747 1-288 (372)
166 cd08219 STKc_Nek3 Catalytic do 100.0 7.7E-36 1.7E-40 311.1 21.8 251 476-747 1-252 (255)
167 cd05100 PTKc_FGFR3 Catalytic d 100.0 9.6E-36 2.1E-40 323.6 23.4 262 475-755 12-297 (334)
168 cd05596 STKc_ROCK Catalytic do 100.0 2.1E-36 4.6E-41 333.1 18.4 255 473-747 41-304 (370)
169 cd05044 PTKc_c-ros Catalytic d 100.0 3.2E-36 7E-41 316.4 18.8 249 482-749 2-268 (269)
170 cd05630 STKc_GRK6 Catalytic do 100.0 8.8E-36 1.9E-40 316.5 22.3 251 477-746 2-260 (285)
171 cd05601 STKc_CRIK Catalytic do 100.0 1.2E-36 2.7E-41 330.0 15.9 253 475-746 1-262 (330)
172 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.1E-35 2.5E-40 312.6 22.8 253 482-749 2-268 (269)
173 cd05632 STKc_GRK5 Catalytic do 100.0 1E-35 2.3E-40 315.8 22.5 251 477-746 2-260 (285)
174 cd05629 STKc_NDR_like_fungal C 100.0 2.9E-36 6.4E-41 333.2 18.8 254 475-747 1-305 (377)
175 cd05620 STKc_nPKC_delta Cataly 100.0 3.9E-36 8.5E-41 324.0 19.3 240 482-745 2-246 (316)
176 cd05040 PTKc_Ack_like Catalyti 100.0 1.1E-35 2.4E-40 310.2 22.0 249 482-749 2-256 (257)
177 cd05625 STKc_LATS1 Catalytic d 100.0 2.7E-36 5.8E-41 334.1 18.3 252 476-746 2-304 (382)
178 cd05110 PTKc_HER4 Catalytic do 100.0 1.4E-35 3E-40 317.8 23.1 260 475-755 7-272 (303)
179 KOG0660 Mitogen-activated prot 100.0 5.7E-37 1.2E-41 312.7 11.7 268 473-747 20-310 (359)
180 cd05598 STKc_LATS Catalytic do 100.0 2.3E-36 5E-41 334.0 17.5 253 476-747 2-301 (376)
181 PTZ00036 glycogen synthase kin 100.0 6.5E-36 1.4E-40 336.1 21.3 260 474-746 65-350 (440)
182 cd06654 STKc_PAK1 Catalytic do 100.0 1.7E-35 3.7E-40 316.0 23.3 250 475-746 20-269 (296)
183 cd05575 STKc_SGK Catalytic dom 100.0 3.3E-36 7.2E-41 325.6 17.7 237 482-742 2-242 (323)
184 cd05621 STKc_ROCK2 Catalytic d 100.0 4.7E-36 1E-40 330.1 19.0 255 473-747 41-304 (370)
185 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 9.3E-36 2E-40 314.4 20.5 239 482-748 2-273 (274)
186 cd06619 PKc_MKK5 Catalytic dom 100.0 2.2E-35 4.8E-40 312.3 23.4 250 476-747 2-253 (279)
187 cd05056 PTKc_FAK Catalytic dom 100.0 2.3E-35 5E-40 310.4 23.3 258 475-754 6-268 (270)
188 cd05041 PTKc_Fes_like Catalyti 100.0 1.7E-35 3.7E-40 307.6 22.0 247 482-749 2-250 (251)
189 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 6.9E-36 1.5E-40 316.9 19.4 263 475-751 4-283 (284)
190 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.7E-35 3.7E-40 310.3 22.1 239 482-748 2-261 (262)
191 KOG1024 Receptor-like protein 100.0 3E-35 6.5E-40 299.7 23.0 267 467-752 276-556 (563)
192 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1E-35 2.2E-40 319.8 20.7 265 475-746 6-285 (309)
193 cd07863 STKc_CDK4 Catalytic do 100.0 1.4E-35 2.9E-40 315.1 21.5 261 476-746 1-284 (288)
194 cd05615 STKc_cPKC_alpha Cataly 100.0 9E-36 1.9E-40 322.2 20.5 242 476-741 1-246 (323)
195 cd05058 PTKc_Met_Ron Catalytic 100.0 2.4E-35 5.3E-40 308.5 23.1 251 482-752 2-260 (262)
196 cd05073 PTKc_Hck Catalytic dom 100.0 1.6E-35 3.5E-40 309.8 21.6 254 474-750 5-259 (260)
197 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.9E-36 6.4E-41 315.1 16.0 240 482-749 2-258 (258)
198 cd05582 STKc_RSK_N N-terminal 100.0 2.2E-36 4.8E-41 326.3 15.1 239 481-743 2-245 (318)
199 cd06615 PKc_MEK Catalytic doma 100.0 1.9E-35 4.1E-40 317.5 22.2 262 475-747 1-287 (308)
200 PHA03211 serine/threonine kina 100.0 3E-35 6.4E-40 330.0 24.6 263 474-747 168-455 (461)
201 cd05042 PTKc_Aatyk Catalytic d 100.0 2.5E-35 5.4E-40 309.9 22.6 253 482-749 2-268 (269)
202 KOG0658 Glycogen synthase kina 100.0 1.3E-36 2.8E-41 310.6 12.2 261 475-746 24-305 (364)
203 KOG0611 Predicted serine/threo 100.0 1.4E-36 3E-41 310.1 12.3 247 475-747 53-303 (668)
204 cd08223 STKc_Nek4 Catalytic do 100.0 3.3E-35 7.2E-40 306.4 23.1 250 476-746 1-253 (257)
205 cd06612 STKc_MST1_2 Catalytic 100.0 2.6E-35 5.6E-40 306.9 21.9 250 475-746 3-252 (256)
206 cd08221 STKc_Nek9 Catalytic do 100.0 3.6E-35 7.7E-40 306.1 22.8 252 476-748 1-254 (256)
207 cd07861 STKc_CDK1_euk Catalyti 100.0 3.3E-35 7.1E-40 311.5 22.7 262 476-746 1-281 (285)
208 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.4E-35 5.1E-40 307.8 21.1 238 482-749 2-259 (259)
209 cd05604 STKc_SGK3 Catalytic do 100.0 4.2E-36 9.2E-41 325.1 16.0 239 482-744 2-244 (325)
210 cd06655 STKc_PAK2 Catalytic do 100.0 3.7E-35 8.1E-40 313.4 22.9 250 475-746 19-268 (296)
211 cd05622 STKc_ROCK1 Catalytic d 100.0 1.1E-35 2.4E-40 327.3 19.4 261 467-747 35-304 (371)
212 cd05046 PTK_CCK4 Pseudokinase 100.0 3.8E-35 8.1E-40 309.5 22.6 256 475-749 5-274 (275)
213 cd06643 STKc_SLK Catalytic dom 100.0 3.4E-35 7.4E-40 311.2 22.1 251 477-747 7-262 (282)
214 cd05602 STKc_SGK1 Catalytic do 100.0 6.9E-36 1.5E-40 323.4 17.0 240 482-745 2-245 (325)
215 cd06609 STKc_MST3_like Catalyt 100.0 3.3E-35 7E-40 309.9 21.7 247 476-746 2-250 (274)
216 cd06656 STKc_PAK3 Catalytic do 100.0 4.9E-35 1.1E-39 312.6 23.2 251 474-746 18-268 (297)
217 cd05603 STKc_SGK2 Catalytic do 100.0 7.3E-36 1.6E-40 322.7 16.9 237 482-742 2-242 (321)
218 KOG4279 Serine/threonine prote 100.0 3E-36 6.5E-41 324.6 13.6 245 482-746 582-831 (1226)
219 cd06628 STKc_MAPKKK_Byr2_like 100.0 5.9E-35 1.3E-39 306.5 23.1 249 477-746 2-263 (267)
220 KOG2052 Activin A type IB rece 100.0 4.5E-35 9.7E-40 304.1 21.7 265 473-755 209-507 (513)
221 smart00219 TyrKc Tyrosine kina 100.0 5.7E-35 1.2E-39 304.3 22.8 251 478-748 2-258 (258)
222 cd05083 PTKc_Chk Catalytic dom 100.0 3.5E-35 7.5E-40 306.1 21.2 247 475-750 6-253 (254)
223 cd07873 STKc_PCTAIRE1 Catalyti 100.0 3.4E-35 7.4E-40 314.4 21.7 262 475-746 6-285 (301)
224 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.4E-35 5.1E-40 311.6 20.1 248 476-747 5-253 (277)
225 cd08218 STKc_Nek1 Catalytic do 100.0 4.5E-35 9.7E-40 305.4 21.9 250 476-746 1-252 (256)
226 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 3.5E-35 7.5E-40 311.6 21.3 258 475-749 5-268 (284)
227 KOG0594 Protein kinase PCTAIRE 100.0 2.9E-35 6.2E-40 301.6 19.8 268 474-747 10-302 (323)
228 cd05627 STKc_NDR2 Catalytic do 100.0 1.2E-35 2.7E-40 326.2 18.4 253 475-746 1-292 (360)
229 cd06645 STKc_MAP4K3 Catalytic 100.0 3.4E-35 7.4E-40 308.4 20.9 253 475-746 9-264 (267)
230 PF00069 Pkinase: Protein kina 100.0 1.2E-35 2.7E-40 309.9 17.2 253 477-746 1-256 (260)
231 cd05112 PTKc_Itk Catalytic dom 100.0 8.4E-35 1.8E-39 303.4 23.4 251 475-748 4-255 (256)
232 cd06640 STKc_MST4 Catalytic do 100.0 8.4E-35 1.8E-39 307.4 23.7 248 476-747 5-253 (277)
233 PHA03207 serine/threonine kina 100.0 5.4E-35 1.2E-39 324.6 23.0 262 474-747 91-375 (392)
234 cd08227 PK_STRAD_alpha Pseudok 100.0 5.6E-35 1.2E-39 316.6 22.5 257 480-746 3-306 (327)
235 PTZ00284 protein kinase; Provi 100.0 1.9E-35 4.1E-40 335.7 19.6 266 470-746 124-437 (467)
236 cd06613 STKc_MAP4K3_like Catal 100.0 7.8E-35 1.7E-39 304.4 22.7 254 475-746 3-259 (262)
237 cd07876 STKc_JNK2 Catalytic do 100.0 7.4E-35 1.6E-39 319.8 22.8 264 473-747 19-315 (359)
238 cd08528 STKc_Nek10 Catalytic d 100.0 1E-34 2.2E-39 305.2 22.9 254 476-749 1-268 (269)
239 cd06644 STKc_STK10_LOK Catalyt 100.0 1E-34 2.2E-39 309.3 23.1 252 475-746 12-268 (292)
240 cd06651 STKc_MEKK3 Catalytic d 100.0 6.7E-35 1.5E-39 306.2 21.3 251 475-746 2-260 (266)
241 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.1E-34 2.4E-39 305.5 22.9 254 477-746 3-268 (272)
242 cd08220 STKc_Nek8 Catalytic do 100.0 9.5E-35 2.1E-39 302.7 22.1 249 476-746 1-252 (256)
243 cd06611 STKc_SLK_like Catalyti 100.0 5.2E-35 1.1E-39 309.4 20.4 253 475-747 5-262 (280)
244 cd06638 STKc_myosinIIIA Cataly 100.0 5.1E-35 1.1E-39 310.3 20.3 263 465-747 8-283 (286)
245 cd05597 STKc_DMPK_like Catalyt 100.0 8.3E-35 1.8E-39 315.8 22.3 256 475-747 1-266 (331)
246 cd07874 STKc_JNK3 Catalytic do 100.0 9E-35 2E-39 318.7 22.7 265 472-747 14-311 (355)
247 PHA03209 serine/threonine kina 100.0 9.3E-35 2E-39 318.7 22.5 192 474-679 65-256 (357)
248 cd06639 STKc_myosinIIIB Cataly 100.0 9.5E-35 2E-39 309.3 21.6 262 465-746 12-286 (291)
249 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.3E-34 2.9E-39 306.9 22.6 265 475-746 1-282 (286)
250 cd07833 STKc_CDKL Catalytic do 100.0 6.6E-35 1.4E-39 309.6 20.2 265 476-746 2-284 (288)
251 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.4E-34 3E-39 304.7 22.5 256 477-751 1-272 (273)
252 cd07846 STKc_CDKL2_3 Catalytic 100.0 4.1E-35 8.9E-40 310.9 18.5 265 475-746 1-282 (286)
253 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2E-34 4.4E-39 302.0 23.5 257 475-746 1-263 (267)
254 cd06636 STKc_MAP4K4_6 Catalyti 100.0 7.5E-35 1.6E-39 308.5 20.4 261 465-746 6-278 (282)
255 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.7E-34 3.7E-39 303.6 22.9 253 482-749 2-267 (268)
256 cd05623 STKc_MRCK_alpha Cataly 100.0 5.7E-35 1.2E-39 317.2 19.7 256 475-747 1-266 (332)
257 cd07875 STKc_JNK1 Catalytic do 100.0 1.1E-34 2.4E-39 319.2 21.9 264 473-747 22-318 (364)
258 cd06623 PKc_MAPKK_plant_like C 100.0 2.7E-34 5.8E-39 300.5 23.7 253 475-747 1-256 (264)
259 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.1E-34 2.4E-39 307.8 21.0 252 476-746 2-261 (286)
260 cd06632 STKc_MEKK1_plant Catal 100.0 1.4E-34 3.1E-39 301.6 21.4 247 477-746 2-254 (258)
261 KOG0599 Phosphorylase kinase g 100.0 1.2E-35 2.7E-40 289.6 12.3 254 472-746 14-282 (411)
262 cd05574 STKc_phototropin_like 100.0 1.5E-34 3.2E-39 311.6 22.2 254 475-746 1-288 (316)
263 cd05609 STKc_MAST Catalytic do 100.0 9.8E-35 2.1E-39 311.5 20.4 257 475-750 1-273 (305)
264 cd06631 STKc_YSK4 Catalytic do 100.0 1.9E-34 4.1E-39 302.4 22.0 251 476-746 1-261 (265)
265 cd07860 STKc_CDK2_3 Catalytic 100.0 1.2E-34 2.5E-39 307.2 20.4 262 476-746 1-280 (284)
266 PTZ00266 NIMA-related protein 100.0 1.3E-34 2.8E-39 339.4 22.7 256 472-746 10-294 (1021)
267 KOG0200 Fibroblast/platelet-de 100.0 9.1E-35 2E-39 336.9 21.3 261 475-753 296-581 (609)
268 cd08217 STKc_Nek2 Catalytic do 100.0 1.4E-34 3E-39 302.5 20.7 254 476-747 1-262 (265)
269 cd05624 STKc_MRCK_beta Catalyt 100.0 8E-35 1.7E-39 315.9 19.2 256 475-747 1-266 (331)
270 cd07839 STKc_CDK5 Catalytic do 100.0 1.9E-34 4.1E-39 305.7 21.0 262 476-746 1-280 (284)
271 cd06652 STKc_MEKK2 Catalytic d 100.0 3.5E-34 7.5E-39 300.5 22.8 251 475-746 2-260 (265)
272 cd06605 PKc_MAPKK Catalytic do 100.0 1.1E-34 2.5E-39 303.8 19.0 252 476-746 2-256 (265)
273 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 6E-34 1.3E-38 302.6 24.7 258 475-746 1-265 (287)
274 KOG0610 Putative serine/threon 100.0 1.2E-34 2.5E-39 299.1 18.4 253 475-745 77-390 (459)
275 cd07878 STKc_p38beta_MAPK11 Ca 100.0 6.3E-35 1.4E-39 318.4 17.4 261 471-747 11-298 (343)
276 cd06659 STKc_PAK6 Catalytic do 100.0 1.6E-34 3.4E-39 308.7 20.0 246 480-747 26-271 (297)
277 cd07841 STKc_CDK7 Catalytic do 100.0 4.8E-34 1E-38 304.8 23.5 262 476-747 1-282 (298)
278 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.9E-34 4.1E-39 305.4 20.1 251 475-746 1-260 (283)
279 KOG0032 Ca2+/calmodulin-depend 100.0 2.8E-34 6.1E-39 311.4 21.8 251 474-746 34-292 (382)
280 cd07868 STKc_CDK8 Catalytic do 100.0 3.6E-34 7.9E-39 308.7 22.6 196 481-682 7-219 (317)
281 cd06608 STKc_myosinIII_like Ca 100.0 2.2E-34 4.7E-39 302.9 20.2 254 473-746 4-271 (275)
282 cd07832 STKc_CCRK Catalytic do 100.0 2.6E-34 5.7E-39 304.6 20.7 262 476-746 1-281 (286)
283 cd06630 STKc_MEKK1 Catalytic d 100.0 3.4E-34 7.4E-39 300.7 21.4 254 476-746 1-263 (268)
284 cd06641 STKc_MST3 Catalytic do 100.0 5.1E-34 1.1E-38 301.4 22.8 247 477-747 6-253 (277)
285 cd07844 STKc_PCTAIRE_like Cata 100.0 3.8E-34 8.2E-39 304.6 21.9 263 475-746 5-287 (291)
286 cd06626 STKc_MEKK4 Catalytic d 100.0 6E-34 1.3E-38 298.0 22.9 253 476-746 1-260 (264)
287 cd08225 STKc_Nek5 Catalytic do 100.0 2.8E-34 6.2E-39 299.2 20.3 250 476-746 1-253 (257)
288 cd06658 STKc_PAK5 Catalytic do 100.0 1.2E-34 2.6E-39 308.8 17.9 246 480-747 27-272 (292)
289 cd05586 STKc_Sck1_like Catalyt 100.0 4.7E-35 1E-39 317.6 14.9 241 483-746 1-252 (330)
290 cd06648 STKc_PAK_II Catalytic 100.0 6.1E-34 1.3E-38 302.3 22.8 249 476-746 20-268 (285)
291 cd06917 STKc_NAK1_like Catalyt 100.0 6E-34 1.3E-38 300.7 22.5 248 476-746 2-254 (277)
292 cd07867 STKc_CDC2L6 Catalytic 100.0 7E-34 1.5E-38 306.3 23.4 196 481-682 7-219 (317)
293 cd05580 STKc_PKA Catalytic dom 100.0 4.3E-34 9.4E-39 304.2 21.4 244 475-745 1-252 (290)
294 cd06647 STKc_PAK_I Catalytic d 100.0 5.5E-34 1.2E-38 303.9 22.2 251 475-747 19-269 (293)
295 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.2E-33 2.6E-38 300.8 24.8 265 473-746 3-287 (291)
296 cd05122 PKc_STE Catalytic doma 100.0 1.2E-33 2.6E-38 292.6 24.0 250 476-746 1-250 (253)
297 cd06616 PKc_MKK4 Catalytic dom 100.0 3.1E-34 6.7E-39 304.8 19.8 255 476-747 5-267 (288)
298 KOG0033 Ca2+/calmodulin-depend 100.0 4.2E-36 9.2E-41 288.9 4.9 251 474-745 10-265 (355)
299 KOG0584 Serine/threonine prote 100.0 2.3E-35 5E-40 319.0 11.2 242 482-746 47-295 (632)
300 cd06606 STKc_MAPKKK Catalytic 100.0 7.9E-34 1.7E-38 295.3 22.3 252 476-746 1-256 (260)
301 KOG0667 Dual-specificity tyros 100.0 1.8E-34 4E-39 315.2 18.1 203 476-688 187-397 (586)
302 cd07835 STKc_CDK1_like Catalyt 100.0 5E-34 1.1E-38 302.2 20.9 262 477-746 1-279 (283)
303 cd06607 STKc_TAO Catalytic dom 100.0 7.8E-34 1.7E-38 304.8 22.6 246 475-746 15-266 (307)
304 cd07843 STKc_CDC2L1 Catalytic 100.0 8E-34 1.7E-38 302.4 22.3 265 475-746 5-289 (293)
305 KOG0574 STE20-like serine/thre 100.0 3.1E-36 6.8E-41 297.0 3.3 248 477-746 35-282 (502)
306 cd07840 STKc_CDK9_like Catalyt 100.0 7.5E-34 1.6E-38 301.0 21.1 261 477-746 1-283 (287)
307 cd07837 STKc_CdkB_plant Cataly 100.0 1E-33 2.2E-38 301.8 21.6 263 475-746 1-290 (295)
308 cd05578 STKc_Yank1 Catalytic d 100.0 3.9E-34 8.3E-39 298.8 18.0 248 476-745 1-253 (258)
309 KOG0577 Serine/threonine prote 100.0 3.2E-35 7E-40 312.3 9.8 245 476-746 27-277 (948)
310 cd06614 STKc_PAK Catalytic dom 100.0 1.2E-33 2.7E-38 299.9 22.0 254 473-747 17-270 (286)
311 cd07842 STKc_CDK8_like Catalyt 100.0 1.7E-33 3.7E-38 303.0 23.0 267 476-746 1-312 (316)
312 cd05633 STKc_GRK3 Catalytic do 100.0 1.4E-33 3.1E-38 298.5 21.8 243 482-747 1-255 (279)
313 cd05572 STKc_cGK_PKG Catalytic 100.0 1.5E-33 3.3E-38 295.0 21.8 243 483-746 1-251 (262)
314 cd06635 STKc_TAO1 Catalytic do 100.0 2.4E-33 5.1E-38 302.5 23.9 246 477-748 27-278 (317)
315 cd07836 STKc_Pho85 Catalytic d 100.0 1.7E-33 3.6E-38 298.3 22.3 264 476-746 1-280 (284)
316 cd07864 STKc_CDK12 Catalytic d 100.0 1.6E-33 3.5E-38 301.2 22.4 265 472-746 4-298 (302)
317 PLN00009 cyclin-dependent kina 100.0 1.6E-33 3.4E-38 300.3 22.2 262 475-746 2-283 (294)
318 cd07852 STKc_MAPK15 Catalytic 100.0 4.9E-34 1.1E-38 310.5 18.4 268 473-747 5-295 (337)
319 KOG0596 Dual specificity; seri 100.0 1.1E-34 2.4E-39 307.7 12.8 252 474-746 360-626 (677)
320 cd05577 STKc_GRK Catalytic dom 100.0 1.8E-33 3.9E-38 297.3 21.5 245 483-746 1-253 (277)
321 KOG0579 Ste20-like serine/thre 100.0 5.4E-35 1.2E-39 311.9 9.7 250 477-746 34-288 (1187)
322 cd06627 STKc_Cdc7_like Catalyt 100.0 3.5E-33 7.6E-38 290.1 22.7 248 476-746 1-250 (254)
323 cd08226 PK_STRAD_beta Pseudoki 100.0 2E-33 4.2E-38 304.7 21.4 260 482-746 5-307 (328)
324 cd07865 STKc_CDK9 Catalytic do 100.0 2.4E-33 5.3E-38 300.8 21.8 268 474-746 11-306 (310)
325 cd08215 STKc_Nek Catalytic dom 100.0 3E-33 6.5E-38 291.0 21.8 250 476-746 1-254 (258)
326 cd07831 STKc_MOK Catalytic dom 100.0 3E-33 6.5E-38 295.9 21.7 258 477-746 1-278 (282)
327 KOG0986 G protein-coupled rece 100.0 1.6E-34 3.5E-39 299.7 11.6 245 475-741 185-435 (591)
328 cd08530 STKc_CNK2-like Catalyt 100.0 2.3E-33 5E-38 292.1 20.5 248 476-746 1-252 (256)
329 cd07849 STKc_ERK1_2_like Catal 100.0 8.5E-34 1.9E-38 308.5 17.9 264 474-747 4-292 (336)
330 cd05118 STKc_CMGC Catalytic do 100.0 1.9E-33 4.2E-38 297.4 19.6 260 477-746 1-279 (283)
331 cd07845 STKc_CDK10 Catalytic d 100.0 2.7E-33 5.9E-38 300.8 21.0 264 474-747 6-290 (309)
332 KOG4717 Serine/threonine prote 100.0 9.8E-34 2.1E-38 296.7 16.8 247 476-746 19-269 (864)
333 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.1E-33 2.3E-38 307.9 17.9 269 474-751 4-297 (337)
334 cd07850 STKc_JNK Catalytic dom 100.0 3.5E-33 7.5E-38 305.9 22.0 264 473-747 14-311 (353)
335 cd07855 STKc_ERK5 Catalytic do 100.0 1.2E-33 2.6E-38 307.2 17.2 268 474-747 4-294 (334)
336 cd07838 STKc_CDK4_6_like Catal 100.0 5.3E-33 1.1E-37 294.6 21.7 261 477-746 1-283 (287)
337 cd05579 STKc_MAST_like Catalyt 100.0 2.1E-33 4.6E-38 293.5 18.3 245 483-749 1-256 (265)
338 cd06653 STKc_MEKK3_like_1 Cata 100.0 5.8E-33 1.2E-37 291.2 21.5 251 475-746 2-260 (264)
339 cd07830 STKc_MAK_like Catalyti 100.0 5E-33 1.1E-37 294.4 21.1 263 477-746 1-279 (283)
340 cd06657 STKc_PAK4 Catalytic do 100.0 3.9E-33 8.5E-38 297.2 20.2 244 481-746 26-269 (292)
341 PHA03390 pk1 serine/threonine- 100.0 1.5E-32 3.2E-37 288.9 24.2 251 467-746 6-261 (267)
342 PHA02882 putative serine/threo 100.0 9.8E-33 2.1E-37 294.4 23.2 257 475-749 12-294 (294)
343 cd07879 STKc_p38delta_MAPK13 C 100.0 2.4E-33 5.3E-38 305.7 18.5 267 474-753 14-305 (342)
344 cd05611 STKc_Rim15_like Cataly 100.0 5.3E-33 1.1E-37 290.6 19.9 244 481-748 2-249 (260)
345 KOG0983 Mitogen-activated prot 100.0 1E-33 2.2E-38 276.5 12.2 250 477-746 94-348 (391)
346 cd06618 PKc_MKK7 Catalytic dom 100.0 9.6E-33 2.1E-37 294.7 20.9 253 475-747 15-273 (296)
347 cd05606 STKc_beta_ARK Catalyti 100.0 1.6E-32 3.4E-37 290.4 22.1 243 482-747 1-255 (278)
348 cd08216 PK_STRAD Pseudokinase 100.0 1E-32 2.2E-37 297.0 20.8 256 487-747 12-295 (314)
349 cd06634 STKc_TAO2 Catalytic do 100.0 1.3E-32 2.7E-37 295.6 21.5 247 476-748 16-268 (308)
350 cd07877 STKc_p38alpha_MAPK14 C 100.0 6.1E-33 1.3E-37 302.9 19.1 272 463-747 5-300 (345)
351 PHA03210 serine/threonine kina 100.0 6.6E-33 1.4E-37 316.4 20.0 269 473-747 146-454 (501)
352 cd05581 STKc_PDK1 Catalytic do 100.0 5.9E-33 1.3E-37 293.0 18.1 250 475-746 1-276 (280)
353 PTZ00024 cyclin-dependent prot 100.0 1.5E-32 3.2E-37 298.7 21.4 262 475-746 8-312 (335)
354 cd06633 STKc_TAO3 Catalytic do 100.0 3.3E-32 7.2E-37 293.0 23.3 245 477-747 23-273 (313)
355 cd07834 STKc_MAPK Catalytic do 100.0 5.4E-33 1.2E-37 301.3 17.2 268 476-752 1-296 (330)
356 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 2.2E-32 4.8E-37 296.3 21.6 265 470-747 5-288 (328)
357 KOG0690 Serine/threonine prote 100.0 1E-33 2.2E-38 282.1 9.9 242 474-739 167-411 (516)
358 cd07829 STKc_CDK_like Catalyti 100.0 1.8E-32 4E-37 289.7 19.2 259 477-746 1-278 (282)
359 cd05583 STKc_MSK_N N-terminal 100.0 2.7E-32 5.9E-37 289.9 20.6 257 476-751 1-267 (288)
360 cd07866 STKc_BUR1 Catalytic do 100.0 1.8E-32 4E-37 294.2 18.7 265 474-746 7-307 (311)
361 cd08222 STKc_Nek11 Catalytic d 100.0 2.7E-32 5.9E-37 285.2 19.5 249 476-746 1-256 (260)
362 KOG1006 Mitogen-activated prot 100.0 1.2E-34 2.5E-39 282.3 1.1 254 478-747 67-327 (361)
363 KOG4250 TANK binding protein k 100.0 1E-32 2.3E-37 301.9 16.1 270 478-753 16-312 (732)
364 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.4E-32 3.1E-37 299.6 17.2 265 475-746 5-299 (342)
365 cd05613 STKc_MSK1_N N-terminal 100.0 6.7E-32 1.5E-36 287.2 21.8 252 476-746 1-267 (290)
366 KOG0586 Serine/threonine prote 100.0 1.4E-32 3E-37 297.4 16.2 247 473-746 54-305 (596)
367 cd07880 STKc_p38gamma_MAPK12 C 100.0 8.5E-32 1.8E-36 293.7 22.4 263 471-746 11-297 (343)
368 cd07857 STKc_MPK1 Catalytic do 100.0 4.9E-32 1.1E-36 294.2 19.8 261 476-746 1-291 (332)
369 cd05123 STKc_AGC Catalytic dom 100.0 7.6E-32 1.6E-36 279.7 19.4 237 483-743 1-240 (250)
370 KOG4645 MAPKKK (MAP kinase kin 100.0 1.3E-33 2.7E-38 324.7 5.5 254 474-747 1234-1494(1509)
371 cd07851 STKc_p38 Catalytic dom 100.0 1.8E-32 3.8E-37 299.1 14.1 260 472-746 12-297 (343)
372 KOG0696 Serine/threonine prote 100.0 1.1E-32 2.4E-37 282.2 11.6 243 473-739 347-593 (683)
373 KOG1035 eIF-2alpha kinase GCN2 100.0 3.6E-32 7.9E-37 311.5 16.0 257 471-746 475-870 (1351)
374 cd05576 STKc_RPK118_like Catal 100.0 2.8E-31 6E-36 274.0 17.1 222 486-743 4-225 (237)
375 KOG0587 Traf2- and Nck-interac 100.0 2.7E-31 5.8E-36 295.8 17.7 258 469-746 13-281 (953)
376 cd05610 STKc_MASTL Catalytic d 100.0 9.3E-31 2E-35 308.0 22.8 146 475-625 4-152 (669)
377 KOG0666 Cyclin C-dependent kin 100.0 2.2E-31 4.8E-36 264.5 14.1 272 473-748 22-338 (438)
378 KOG0604 MAP kinase-activated p 100.0 1.3E-31 2.7E-36 265.2 11.1 250 473-746 59-321 (400)
379 KOG0607 MAP kinase-interacting 100.0 2.7E-31 5.8E-36 264.6 13.4 260 467-746 75-360 (463)
380 smart00220 S_TKc Serine/Threon 100.0 1.9E-30 4.1E-35 266.7 18.1 239 487-746 1-240 (244)
381 PLN03225 Serine/threonine-prot 100.0 6.3E-30 1.4E-34 293.8 22.1 260 473-746 130-449 (566)
382 KOG4236 Serine/threonine prote 100.0 4.6E-31 1E-35 277.3 11.2 243 481-745 570-817 (888)
383 KOG0612 Rho-associated, coiled 100.0 4.6E-31 1E-35 300.1 11.9 259 467-745 67-336 (1317)
384 KOG0603 Ribosomal protein S6 k 100.0 1.7E-30 3.6E-35 282.8 14.2 240 474-746 321-562 (612)
385 KOG0662 Cyclin-dependent kinas 100.0 4.5E-30 9.7E-35 236.4 13.1 264 476-746 3-282 (292)
386 KOG0984 Mitogen-activated prot 100.0 1.3E-30 2.8E-35 245.5 9.6 207 470-682 41-255 (282)
387 PLN03224 probable serine/threo 100.0 1.9E-29 4.1E-34 282.8 20.8 260 473-746 143-499 (507)
388 KOG0669 Cyclin T-dependent kin 100.0 1.5E-31 3.2E-36 258.5 3.2 265 476-745 18-313 (376)
389 KOG0695 Serine/threonine prote 100.0 1.4E-29 3E-34 253.2 14.0 249 474-739 249-502 (593)
390 KOG0671 LAMMER dual specificit 100.0 4.1E-30 8.8E-35 263.2 9.0 262 474-746 88-405 (415)
391 KOG0614 cGMP-dependent protein 100.0 2.1E-30 4.6E-35 271.9 5.9 248 475-745 420-675 (732)
392 KOG1151 Tousled-like protein k 100.0 1.9E-29 4.2E-34 260.3 9.6 257 475-745 463-739 (775)
393 KOG1027 Serine/threonine prote 100.0 2.1E-29 4.4E-34 279.7 9.4 244 477-745 511-765 (903)
394 KOG0608 Warts/lats-like serine 100.0 1.6E-28 3.4E-33 263.3 15.4 222 467-693 618-886 (1034)
395 KOG0664 Nemo-like MAPK-related 100.0 1.1E-29 2.4E-34 247.8 4.4 265 477-748 55-344 (449)
396 cd00180 PKc Catalytic domain o 100.0 4.3E-27 9.3E-32 235.5 21.3 211 483-747 1-214 (215)
397 smart00221 STYKc Protein kinas 99.9 5E-26 1.1E-30 231.5 19.9 200 477-681 1-202 (225)
398 KOG1152 Signal transduction se 99.9 1.9E-27 4.2E-32 253.5 9.7 197 475-680 561-770 (772)
399 KOG0576 Mitogen-activated prot 99.9 2.2E-27 4.7E-32 257.1 6.3 253 475-746 15-270 (829)
400 KOG1345 Serine/threonine kinas 99.9 2.4E-26 5.2E-31 224.9 11.0 258 474-752 23-289 (378)
401 KOG0665 Jun-N-terminal kinase 99.9 2E-26 4.3E-31 231.0 10.7 255 475-746 17-309 (369)
402 KOG0668 Casein kinase II, alph 99.9 3.4E-26 7.3E-31 218.7 11.6 256 474-746 37-321 (338)
403 KOG1290 Serine/threonine prote 99.9 6E-25 1.3E-29 230.9 19.8 132 475-610 78-221 (590)
404 KOG0195 Integrin-linked kinase 99.9 1.2E-25 2.5E-30 219.8 7.0 246 482-752 197-447 (448)
405 KOG0670 U4/U6-associated splic 99.9 8.7E-26 1.9E-30 238.0 6.4 265 473-746 430-745 (752)
406 PLN00181 protein SPA1-RELATED; 99.9 4.1E-25 8.9E-30 266.4 8.9 197 527-746 27-264 (793)
407 smart00750 KIND kinase non-cat 99.9 1.2E-23 2.6E-28 206.4 14.7 169 557-753 1-171 (176)
408 KOG1167 Serine/threonine prote 99.9 6.1E-24 1.3E-28 221.0 11.7 264 472-746 33-380 (418)
409 PRK09188 serine/threonine prot 99.9 4.2E-22 9.2E-27 214.6 13.9 168 471-653 14-194 (365)
410 KOG1164 Casein kinase (serine/ 99.9 5.8E-20 1.3E-24 198.3 23.2 262 476-754 19-300 (322)
411 COG0515 SPS1 Serine/threonine 99.8 1.4E-19 3E-24 193.5 24.9 260 477-747 2-275 (384)
412 KOG1023 Natriuretic peptide re 99.8 1.3E-20 2.9E-25 206.2 13.3 219 526-754 1-227 (484)
413 KOG0590 Checkpoint kinase and 99.8 3.6E-21 7.8E-26 220.8 6.3 254 479-746 322-584 (601)
414 KOG1240 Protein kinase contain 99.8 2.6E-20 5.7E-25 212.3 5.8 248 476-747 24-291 (1431)
415 cd05147 RIO1_euk RIO kinase fa 99.8 6.9E-19 1.5E-23 174.5 11.6 137 481-626 3-166 (190)
416 PRK10359 lipopolysaccharide co 99.8 5.4E-19 1.2E-23 177.4 9.9 171 473-673 29-216 (232)
417 PF14531 Kinase-like: Kinase-l 99.8 2.5E-18 5.3E-23 177.7 13.2 233 476-738 13-288 (288)
418 KOG1163 Casein kinase (serine/ 99.8 6.3E-18 1.4E-22 163.6 14.6 263 474-752 14-285 (341)
419 cd05145 RIO1_like RIO kinase f 99.8 5.9E-18 1.3E-22 168.3 14.0 141 480-628 2-168 (190)
420 PRK12274 serine/threonine prot 99.8 9.1E-18 2E-22 164.9 14.8 190 478-685 5-213 (218)
421 KOG1165 Casein kinase (serine/ 99.7 5.5E-17 1.2E-21 163.9 17.2 265 475-755 28-303 (449)
422 KOG4158 BRPK/PTEN-induced prot 99.7 1.1E-17 2.3E-22 172.3 11.6 197 530-748 274-511 (598)
423 PRK10345 hypothetical protein; 99.7 2.6E-17 5.6E-22 164.8 13.5 136 477-623 4-155 (210)
424 KOG1166 Mitotic checkpoint ser 99.7 7.3E-17 1.6E-21 188.6 17.5 199 470-677 693-901 (974)
425 KOG0603 Ribosomal protein S6 k 99.7 3.3E-18 7.2E-23 187.1 4.0 226 482-741 1-232 (612)
426 PRK14879 serine/threonine prot 99.7 4.8E-16 1E-20 157.3 13.4 134 481-626 2-143 (211)
427 smart00090 RIO RIO-like kinase 99.7 5.2E-16 1.1E-20 159.2 13.5 141 476-626 29-197 (237)
428 PF11721 Malectin: Di-glucose 99.7 4.8E-17 1E-21 158.2 4.9 145 196-360 2-154 (174)
429 KOG1033 eIF-2alpha kinase PEK/ 99.7 4.1E-17 8.8E-22 175.5 4.0 171 545-740 329-505 (516)
430 PRK09605 bifunctional UGMP fam 99.6 1E-15 2.3E-20 176.4 14.8 137 474-626 332-476 (535)
431 TIGR03724 arch_bud32 Kae1-asso 99.6 9.4E-16 2E-20 153.6 12.5 130 482-626 1-138 (199)
432 KOG0606 Microtubule-associated 99.6 2.2E-16 4.7E-21 180.8 7.2 210 474-739 82-304 (1205)
433 cd05144 RIO2_C RIO kinase fami 99.6 3.4E-15 7.3E-20 149.6 12.6 135 476-626 16-174 (198)
434 cd05120 APH_ChoK_like Aminogly 99.6 2.6E-14 5.7E-19 135.4 14.1 135 479-626 2-138 (155)
435 cd05119 RIO RIO kinase family, 99.5 8.1E-14 1.8E-18 138.1 11.3 134 481-626 3-163 (187)
436 PRK01723 3-deoxy-D-manno-octul 99.5 3.1E-13 6.8E-18 138.9 13.4 134 481-626 37-191 (239)
437 KOG1266 Protein kinase [Signal 99.4 3.3E-13 7.2E-18 136.6 8.2 201 524-745 119-329 (458)
438 KOG0590 Checkpoint kinase and 99.4 4.1E-14 8.9E-19 162.8 1.1 256 476-745 21-284 (601)
439 PF11721 Malectin: Di-glucose 99.4 8.3E-13 1.8E-17 128.5 7.1 139 12-157 2-174 (174)
440 TIGR01982 UbiB 2-polyprenylphe 99.3 8.7E-12 1.9E-16 139.3 12.9 143 476-627 119-307 (437)
441 KOG0601 Cyclin-dependent kinas 99.2 1.2E-11 2.7E-16 136.1 8.7 248 476-745 115-377 (524)
442 KOG1243 Protein kinase [Genera 99.2 1.5E-10 3.3E-15 128.6 14.8 170 493-675 30-199 (690)
443 cd05151 ChoK Choline Kinase (C 99.2 1.2E-10 2.7E-15 113.2 11.8 131 480-626 3-136 (170)
444 PRK04750 ubiB putative ubiquin 99.1 1.7E-10 3.8E-15 130.4 10.8 147 474-628 119-315 (537)
445 PLN03150 hypothetical protein; 99.1 1.1E-09 2.3E-14 128.2 14.8 148 12-165 193-365 (623)
446 cd05154 ACAD10_11_like Acyl-Co 99.0 2.5E-09 5.4E-14 108.7 14.3 143 481-627 4-207 (223)
447 KOG0601 Cyclin-dependent kinas 99.0 2.2E-10 4.8E-15 126.4 5.9 250 472-751 262-518 (524)
448 cd05146 RIO3_euk RIO kinase fa 99.0 3E-09 6.5E-14 104.8 12.4 135 481-626 3-173 (197)
449 KOG3741 Poly(A) ribonuclease s 99.0 1.3E-08 2.7E-13 110.0 17.6 169 488-678 289-475 (655)
450 KOG3087 Serine/threonine prote 98.9 1.2E-08 2.7E-13 96.4 11.4 143 479-626 11-165 (229)
451 COG3642 Mn2+-dependent serine/ 98.9 1.7E-08 3.7E-13 96.1 11.4 130 482-626 3-140 (204)
452 KOG0606 Microtubule-associated 98.8 1.3E-09 2.8E-14 126.1 3.1 249 474-742 803-1084(1205)
453 COG4248 Uncharacterized protei 98.7 5.4E-07 1.2E-11 95.2 18.4 267 481-763 17-312 (637)
454 PRK15123 lipopolysaccharide co 98.7 1.7E-07 3.7E-12 97.6 13.6 140 482-626 29-194 (268)
455 KOG2137 Protein kinase [Signal 98.6 2.3E-08 5E-13 112.0 2.8 151 580-745 105-263 (700)
456 PF01163 RIO1: RIO1 family; I 98.5 8.8E-07 1.9E-11 87.1 11.9 124 490-626 1-155 (188)
457 PF12819 Malectin_like: Carboh 98.4 2E-06 4.3E-11 93.5 12.8 148 9-162 177-347 (347)
458 PRK09902 hypothetical protein; 98.4 3.8E-06 8.3E-11 83.1 13.4 137 483-625 26-178 (216)
459 PF06293 Kdo: Lipopolysacchari 98.3 3.8E-06 8.2E-11 84.5 11.2 106 516-626 55-170 (206)
460 COG0478 RIO-like serine/threon 98.2 8.4E-06 1.8E-10 82.6 10.3 130 481-625 97-250 (304)
461 TIGR02172 Fb_sc_TIGR02172 Fibr 98.2 2.6E-05 5.6E-10 79.5 14.0 140 481-627 7-183 (226)
462 COG0661 AarF Predicted unusual 98.2 1E-05 2.3E-10 91.3 11.2 143 476-627 127-315 (517)
463 PF12260 PIP49_C: Protein-kina 98.0 0.0001 2.3E-09 72.7 14.2 103 520-626 7-111 (188)
464 KOG0576 Mitogen-activated prot 97.9 1E-06 2.2E-11 97.8 -2.5 181 481-679 248-430 (829)
465 cd05150 APH Aminoglycoside 3'- 97.9 0.00019 4E-09 74.3 13.4 139 483-626 6-193 (244)
466 PF01636 APH: Phosphotransfera 97.9 0.0001 2.3E-09 75.1 11.2 143 480-626 2-197 (239)
467 PF06176 WaaY: Lipopolysacchar 97.8 0.00017 3.7E-09 71.8 11.9 136 474-625 30-182 (229)
468 PLN02876 acyl-CoA dehydrogenas 97.8 0.00029 6.3E-09 85.7 15.9 149 480-628 43-259 (822)
469 KOG1235 Predicted unusual prot 97.6 0.00035 7.6E-09 78.9 11.6 144 476-627 163-355 (538)
470 COG1718 RIO1 Serine/threonine 97.6 0.00095 2.1E-08 67.3 12.8 153 463-626 33-215 (268)
471 PF10707 YrbL-PhoP_reg: PhoP r 97.6 0.0013 2.8E-08 65.3 13.5 133 478-623 4-169 (199)
472 cd05155 APH_ChoK_like_1 Unchar 97.5 0.0009 1.9E-08 68.8 12.1 139 481-626 3-194 (235)
473 PRK10593 hypothetical protein; 97.4 0.003 6.5E-08 67.3 15.4 79 477-559 16-100 (297)
474 KOG1035 eIF-2alpha kinase GCN2 97.4 0.00038 8.3E-09 83.0 8.6 197 518-748 228-435 (1351)
475 cd05157 ETNK_euk Ethanolamine 97.4 0.0026 5.6E-08 65.3 13.4 141 481-626 4-201 (235)
476 COG2112 Predicted Ser/Thr prot 97.4 0.0012 2.5E-08 63.1 9.5 130 478-626 25-155 (201)
477 TIGR02721 ycfN_thiK thiamine k 97.3 0.0015 3.2E-08 68.1 11.3 137 483-626 4-175 (256)
478 PRK09550 mtnK methylthioribose 97.3 0.0039 8.4E-08 68.6 14.4 76 481-558 32-117 (401)
479 PF13095 FTA2: Kinetochore Sim 97.3 0.0042 9.2E-08 61.3 13.0 125 475-624 37-206 (207)
480 cd05153 HomoserineK_II Homoser 97.3 0.0019 4.1E-08 68.8 11.5 142 480-626 19-205 (296)
481 cd05156 ChoK_euk Choline Kinas 97.0 0.0066 1.4E-07 64.9 12.3 141 481-626 4-213 (302)
482 PRK05231 homoserine kinase; Pr 96.8 0.02 4.3E-07 61.7 14.2 159 463-626 5-217 (319)
483 TIGR00938 thrB_alt homoserine 96.7 0.036 7.9E-07 59.4 15.0 158 465-626 7-217 (307)
484 PLN02236 choline kinase 96.4 0.035 7.6E-07 60.5 12.8 140 482-626 43-231 (344)
485 COG3173 Predicted aminoglycosi 96.3 0.046 1E-06 58.2 12.7 123 500-629 48-231 (321)
486 PF03881 Fructosamin_kin: Fruc 96.2 0.03 6.6E-07 59.1 10.1 76 477-557 19-97 (288)
487 KOG1826 Ras GTPase activating 95.9 0.006 1.3E-07 74.8 3.7 175 503-679 1255-1440(2724)
488 KOG1093 Predicted protein kina 95.8 0.0055 1.2E-07 67.5 2.9 50 516-566 26-76 (725)
489 TIGR01767 MTRK 5-methylthiorib 95.7 0.1 2.3E-06 56.4 11.7 81 482-563 2-92 (370)
490 cd05152 MPH2' Macrolide 2'-Pho 95.7 0.13 2.8E-06 54.2 12.3 32 596-627 185-217 (276)
491 KOG2268 Serine/threonine prote 95.6 0.014 3.1E-07 60.9 4.7 143 466-624 80-249 (465)
492 PLN02756 S-methyl-5-thioribose 95.5 0.22 4.7E-06 54.9 13.7 80 480-563 37-128 (418)
493 PLN02421 phosphotransferase, a 95.4 0.16 3.4E-06 55.1 12.3 140 482-626 21-213 (330)
494 PRK12396 5-methylribose kinase 95.2 0.095 2.1E-06 57.4 9.8 83 480-563 34-125 (409)
495 PF01633 Choline_kinase: Choli 94.9 0.076 1.7E-06 53.4 7.6 121 501-626 3-174 (211)
496 COG2334 Putative homoserine ki 94.9 0.28 6.1E-06 52.8 12.2 136 487-626 37-228 (331)
497 TIGR02906 spore_CotS spore coa 94.6 0.32 7E-06 52.0 12.1 31 595-626 186-216 (313)
498 PTZ00384 choline kinase; Provi 94.1 0.58 1.3E-05 51.6 12.5 75 482-560 57-137 (383)
499 TIGR02904 spore_ysxE spore coa 93.8 0.38 8.1E-06 51.6 10.3 32 595-626 195-226 (309)
500 PRK11768 serine/threonine prot 93.7 2.3 4.9E-05 46.0 16.1 96 462-559 8-114 (325)
No 1
>PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan []. This entry represents a malectin-like domain found in a number of plant receptor kinases.
Probab=100.00 E-value=2.7e-60 Score=511.80 Aligned_cols=323 Identities=38% Similarity=0.590 Sum_probs=259.6
Q ss_pred EeeCCCcc-c----ccCCCeeeccCCCCCCCCCcccccc---cCCCCCCCcccceee--ccceeEEEecC--CCceE-EE
Q 042216 15 VACGWLGN-I----SAHGQTWAGDVSSQYSPLGHQQSTI---SKKPREPPYSASRLS--HSQFTYTFNVT--PGQKF-IR 81 (767)
Q Consensus 15 i~cG~~~~-~----~~~~~~w~~D~~~~~~~~~~~~~~~---~~~~~~~~~~t~R~f--~~~~~Y~~~~~--~g~~y-vR 81 (767)
||||++.+ + +.+||+|++|..|..++..+..+.. ......++|.|||+| |.|+||+||+. +|.|| ||
T Consensus 1 IdCG~~~~~s~y~D~~tg~~~~~D~~~~~~g~~~~i~~~~~~~~~~~~~~y~taR~F~~g~r~cY~l~~~~~~~~~yliR 80 (347)
T PF12819_consen 1 IDCGSSSNSSSYVDDSTGRTWVSDDDFIDTGKSGNISSQPDSSSSDSSPPYQTARIFPEGSRNCYTLPVTPPGGGKYLIR 80 (347)
T ss_pred CcCCCCCCCcccccCCCCcEEeCCCCcccCCCccccccccCCcCCccccccceEEEcCCCCccEEEeeccCCCCceEEEE
Confidence 79997755 2 3569999999988775554433211 234567889999999 58999999996 57798 99
Q ss_pred EeeecCCCCCCC-----CCCce-EEEEeCceEEEeccCcccCCCCceEEEEEEeec-CCCceEEEEEecCCCCCCCc-ee
Q 042216 82 LHFYSTSYSGFN-----ISSAF-FSVKANSFTLVNNFSASFAPDDTFFKEFCINVP-EDQRSLSITFTPSPDYQDSY-AF 153 (767)
Q Consensus 82 ~~f~~~~y~~~~-----~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~-~~~~~~~l~~~~~~~~~~~~-pf 153 (767)
|||+|||||+++ .++.| ++++.|.|.+|+..+ . ...++++|+++.+. ++...|||+ +++.++ ||
T Consensus 81 l~F~~gnyd~~~fs~~~~~~~FdL~~~~n~~~tV~~~~-~--~~~~~~~E~ii~v~~~~~l~vclv-----~~~~g~~pF 152 (347)
T PF12819_consen 81 LHFYYGNYDGLNFSVSSSPPTFDLLLGFNFWSTVNLSN-S--PSSPVVKEFIINVTWSDTLSVCLV-----PTGSGTFPF 152 (347)
T ss_pred EEeccccccccccccccCCcceEEEECCceeEEEEecC-C--CcceEEEEEEEEEcCCCcEEEEEE-----eCCCCCCCc
Confidence 999999999874 25779 999999999998876 2 12578999888877 687777777 334466 99
Q ss_pred eeeeEeEecCCcceeeccCCcccccccCCcccccchhhhheeeeEeecCCcc-cccCCCCccccccccCCCceecCCCCC
Q 042216 154 INGIELVSMPLNLYYTATDDQRLEFVGEGSQFSILNSNALETLYRINVGGSF-ISPQMDTGMYRTWIADDGYVTDARPSA 232 (767)
Q Consensus 154 is~iE~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~al~~~~R~n~G~~~-~~~~~dd~~~R~W~~d~~~~~~~~~~~ 232 (767)
||||||||||+++|+.. ....+.||++++|+||||.. .+|||||+|||+|.|. .....|
T Consensus 153 IsaiEl~~lp~~ly~~~---------------~~~~s~~L~~~~R~n~G~~~~~iryp~D~~dR~W~~~-----~~~~~~ 212 (347)
T PF12819_consen 153 ISAIELRPLPDSLYPDT---------------DANSSQALETVYRLNVGGSSSFIRYPDDTYDRIWQPY-----SSSPGW 212 (347)
T ss_pred eeEEEEEECCccceecc---------------ccCCCceeEEEEeecCCCcccccCCCCCcceeecccc-----ccCccc
Confidence 99999999999999532 12467899999999999984 6899999999999843 124556
Q ss_pred CCCCcceEEE-eccccCCCCcHHHHHhhhccCCCCCcccccceEEEEecCCCceEEEEEeeeeeecccccCccEEEEEEE
Q 042216 233 LPVNTTIVLR-FSRILNFSAPLAVYRTARTMGLDKNINEQYNLTWEFQVDSGFIYFVRLHFCEFQSEVTEEGDRVFKIYL 311 (767)
Q Consensus 233 ~~~~~~~~~~-~~~~~~~~~P~~v~~ta~~~~~~~~~~~~~~lt~~~~~~~~~~y~v~lhFae~~~~~~~~~~R~F~i~i 311 (767)
..+++..+++ ...++.|.||.+||+||++++++. ..++|+|.+ +++++.|+|+||||||+......++|+|||||
T Consensus 213 ~~ist~~~i~~~~~~~~~~~P~~V~~TA~~~~~~s---~~~nltw~~-~~~~~~y~v~lHFaEi~~~~~~~~~R~F~Iyi 288 (347)
T PF12819_consen 213 SNISTTSNININSSNNPYDAPSAVYQTARTPSNSS---DPLNLTWSF-VDPGFSYYVRLHFAEIQSLSPNNNQREFDIYI 288 (347)
T ss_pred cccccceeeecccCCccCcChHHHHHhhhcccccc---cceEEEecc-CCCCccEEEEEEEeecccccCCCCeEEEEEEE
Confidence 7777777776 467789999999999999988874 237899999 99999999999999999864456689999999
Q ss_pred cccccccccchhh-hcCCCCcceEeeeEEEeccccccccceeEEEecCCCCCCcccccccccceeEEee
Q 042216 312 ANLTAEDVADVIA-WSGGNGVPEYRDYAVAIGSKSDVKKQNLSIALHPAPRWRTKYSDSILNGIEIFKV 379 (767)
Q Consensus 312 n~~~~~~~~di~~-~~~~~~~p~y~~~~v~~~~~~~~~~~~l~i~l~p~~~~~~~~~~~~ln~~~i~~~ 379 (767)
||+.+.+ |+.. +.+....|+|.++.+.++..+ .++|+|+|+.++.. +|+|||+|||+|
T Consensus 289 N~~~~~~--~~~~~~~~~~~~~~~~d~~~~~~~~~-----~~~isL~~t~~S~l---ppiLNalEIy~v 347 (347)
T PF12819_consen 289 NGQTAYS--DVSPPYLGADTVPYYSDYVVNVPDSG-----FLNISLGPTPDSTL---PPILNALEIYKV 347 (347)
T ss_pred CCeEccC--ccCcccccCcceEeecceEEEecCCC-----EEEEEEEeCCCCCc---CceeEeeeeEeC
Confidence 9999987 6655 455677899999998876543 58999999887743 999999999986
No 2
>PLN03150 hypothetical protein; Provisional
Probab=100.00 E-value=7.3e-57 Score=521.76 Aligned_cols=333 Identities=21% Similarity=0.287 Sum_probs=265.5
Q ss_pred CCCCCCceEEEeeCCCcc--cccCCCeeeccCCCCCCCCCcccccccCCCCCCCcccceee----ccceeEEEecCCCce
Q 042216 5 PYYTPTEITFVACGWLGN--ISAHGQTWAGDVSSQYSPLGHQQSTISKKPREPPYSASRLS----HSQFTYTFNVTPGQK 78 (767)
Q Consensus 5 ~~~~p~~~~~i~cG~~~~--~~~~~~~w~~D~~~~~~~~~~~~~~~~~~~~~~~~~t~R~f----~~~~~Y~~~~~~g~~ 78 (767)
.+..++++|+||||++++ +|.+||+|++|..+.++.... .... ....++|.|+|+| |++|||+||++++.+
T Consensus 18 ~~~~~~~~~~I~CGs~~~~~~d~~~~~w~~D~~~~~~~~~~--~~~~-~~~~~~~~t~R~F~~~~g~~~cY~~~~~~~g~ 94 (623)
T PLN03150 18 LASPEPFTMRISCGARVNVRTAPTNTLWYKDFAYTGGIPAN--ATRP-SFIAPPLKTLRYFPLSDGPENCYNINRVPKGH 94 (623)
T ss_pred cccCCCccEEEeCCCCCCcccCCCCCEEcCCcccccCcccc--ccCc-ccccchhhccccCCcccccccceEeeecCCCc
Confidence 344478889999998876 447999999997663221111 1111 2345779999999 459999999977667
Q ss_pred E-EEEeeecCCCCCCCCCCce-EEEEeCceEEEec-cCcccCCCCceEEEEEEeecCCCceEEEEEecCCCCCCCceeee
Q 042216 79 F-IRLHFYSTSYSGFNISSAF-FSVKANSFTLVNN-FSASFAPDDTFFKEFCINVPEDQRSLSITFTPSPDYQDSYAFIN 155 (767)
Q Consensus 79 y-vR~~f~~~~y~~~~~~~~~-~~v~~~~~~~~~~-~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~~~~~~~~~~~pfis 155 (767)
| ||+||+|||||+.+.++.| ++++++.|.+|.. ++. +...+++|+++.++++..+|||+ ++++++||||
T Consensus 95 ylVRl~F~~~~y~~~~~~~~Fdv~~~~~~~~tv~~~~~~---~~~~v~~E~i~~~~~~~l~vcf~-----~~~~~~pFIs 166 (623)
T PLN03150 95 YSVRVFFGLVAEPNFDSEPLFDVSVEGTQISSLKSGWSS---HDEQVFAEALVFLTDGSASICFH-----STGHGDPAIL 166 (623)
T ss_pred EEEEEEeecCCcCCCCCCCceEEEECcEEEEEEecCccc---CCCcEEEEEEEEecCCcEEEEEe-----cCCCCCCcee
Confidence 7 9999999999999988877 8888888998865 222 23478899999999987777776 4457999999
Q ss_pred eeEeEecCCcceeeccCCcccccccCCcccccchhhhheeeeEeecCCccc---ccCCCCcc--ccccccCCCceecCCC
Q 042216 156 GIELVSMPLNLYYTATDDQRLEFVGEGSQFSILNSNALETLYRINVGGSFI---SPQMDTGM--YRTWIADDGYVTDARP 230 (767)
Q Consensus 156 ~iE~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~al~~~~R~n~G~~~~---~~~~dd~~--~R~W~~d~~~~~~~~~ 230 (767)
+|||||||+++|..... +..+.+|+++||+||||+++ .+||||+| ||+|.+|.+|. .+
T Consensus 167 ~iEv~~l~~~~y~~~~~--------------~~~~~~L~~~~R~n~G~~~~~~~~d~~~D~~~~dR~W~~d~~~~---~~ 229 (623)
T PLN03150 167 SIEILQVDDKAYNFGPS--------------WGQGVILRTAKRLSCGAGKSKFDEDYSGDHWGGDRFWNRMQTFG---SG 229 (623)
T ss_pred EEEEEEcCccccccccc--------------ccCceEEEEEEEEEecCcccccccCCCCCcccCccccCcCcccC---CC
Confidence 99999999999953210 01256799999999999864 69999999 99999998876 22
Q ss_pred CCCCCCcceEEEeccccCCCCcHHHHHhhhccCCCCCcccccceEEEEecCCCceEEEEEeeeeeecccccCccEEEEEE
Q 042216 231 SALPVNTTIVLRFSRILNFSAPLAVYRTARTMGLDKNINEQYNLTWEFQVDSGFIYFVRLHFCEFQSEVTEEGDRVFKIY 310 (767)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~P~~v~~ta~~~~~~~~~~~~~~lt~~~~~~~~~~y~v~lhFae~~~~~~~~~~R~F~i~ 310 (767)
.+...++...++....+++.+|+.|||||+++..+. .+++|.|+++++..|+|+|||||++......++|+||||
T Consensus 230 ~~~~~st~~~I~~~~~~~~~~P~~VyqTA~~~~~~~-----~~lty~~~v~~~~~Y~VrLhFaEi~~~~~~~~~R~F~V~ 304 (623)
T PLN03150 230 SDQAISTENVIKKASNAPNFYPESLYQSALVSTDTQ-----PDLSYTMDVDPNRNYSVWLHFAEIDNSITAEGKRVFDVL 304 (623)
T ss_pred cccccccccccccccCCCccChHHHhhhhccccCCC-----CceEEEeecCCCCCEEEEEEEEeccCccCCCceEEEEEE
Confidence 345556666666555678899999999999976532 479999999999999999999999864456799999999
Q ss_pred EcccccccccchhhhcCCCCcceEeeeEEEeccccccccceeEEEecCCCCCCcccccccccceeEEeecC
Q 042216 311 LANLTAEDVADVIAWSGGNGVPEYRDYAVAIGSKSDVKKQNLSIALHPAPRWRTKYSDSILNGIEIFKVDN 381 (767)
Q Consensus 311 in~~~~~~~~di~~~~~~~~~p~y~~~~v~~~~~~~~~~~~l~i~l~p~~~~~~~~~~~~ln~~~i~~~s~ 381 (767)
|||+.+++++|+..++++...|+|+++.+.+.. ..++|+++|..+ .+|++||+|||++..
T Consensus 305 ing~~~~~~~di~~~~g~~~~~~~~~~~v~~~~------g~l~isl~p~~~-----s~pilNaiEI~~~~~ 364 (623)
T PLN03150 305 INGDTAFKDVDIVKMSGERYTALVLNKTVAVSG------RTLTIVLQPKKG-----THAIINAIEVFEIIT 364 (623)
T ss_pred ECCEEeecccChhhhcCCcccceEEEeEEeecC------CeEEEEEeeCCC-----Ccceeeeeeeeeccc
Confidence 999999999999999888888999999876642 358999999652 269999999999975
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-56 Score=485.34 Aligned_cols=291 Identities=48% Similarity=0.825 Sum_probs=259.1
Q ss_pred cccccCHHHHHHHhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeee
Q 042216 461 LCTQFSISEIKEATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGY 540 (767)
Q Consensus 461 ~~~~~~~~ei~~~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~ 540 (767)
....|+++||+.||++|+..++||+|+||.||+|.+.++ +.||||++.....+..++|.+|+++|.+++|||+|+|+||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDG-TVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCC-CEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEE
Confidence 457799999999999999999999999999999999876 8899999876544325679999999999999999999999
Q ss_pred eecCC-ceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEe
Q 042216 541 CNDDG-QMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVS 619 (767)
Q Consensus 541 ~~~~~-~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~ 619 (767)
|.+.+ +.+||||||++|+|.++|+.....+|+|.+|++||.++|+||+|||+.+.+.|||||||++|||||+++++||+
T Consensus 140 C~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls 219 (361)
T KOG1187|consen 140 CLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS 219 (361)
T ss_pred EecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence 99998 49999999999999999987654389999999999999999999999998899999999999999999999999
Q ss_pred ecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhh
Q 042216 620 DFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYR 699 (767)
Q Consensus 620 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~ 699 (767)
|||+|+..+.. .....+...||.+|+|||++..+..++|+|||||||+|+||+||+.+...........+.+|+...+.
T Consensus 220 DFGLa~~~~~~-~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~ 298 (361)
T KOG1187|consen 220 DFGLAKLGPEG-DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLE 298 (361)
T ss_pred CccCcccCCcc-ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHH
Confidence 99999876542 22222211799999999999999999999999999999999999999876655556679999999999
Q ss_pred cCCcccccccccc-CCCCh-hhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 042216 700 NGKIGDIIDPFLK-GNAPP-VCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQ 753 (767)
Q Consensus 700 ~~~~~~~~d~~l~-~~~~~-~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~ 753 (767)
++.+.+++|+.+. +.++. .+..++.+++.+|++.+|.+||+|.||+++|+.+..
T Consensus 299 ~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 299 EGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred CcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 9999999999997 66664 688889999999999999999999999999966553
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-47 Score=405.88 Aligned_cols=254 Identities=34% Similarity=0.527 Sum_probs=213.6
Q ss_pred eeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcc--hhHHHHHHHHHhccccceeeeEeeeeecCC-ceEEEEecCCCC
Q 042216 481 LIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQG--ALEFQTEIGMLSQLRYLHLVSLIGYCNDDG-QMILVYDYMARG 557 (767)
Q Consensus 481 ~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~--~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~-~~~lV~ey~~~g 557 (767)
+.||+|+||+||+|.+.+. ..||||++....... .++|.+|+.+|.+++|||||+++|+|.+.. .+++|||||++|
T Consensus 47 ~~iG~G~~g~V~~~~~~g~-~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~G 125 (362)
T KOG0192|consen 47 EVLGSGSFGTVYKGKWRGT-DVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGG 125 (362)
T ss_pred hhcccCCceeEEEEEeCCc-eeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCC
Confidence 3599999999999999863 349999997653222 558999999999999999999999999887 799999999999
Q ss_pred ChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCC-eEecCCCCCCeEECCCC-cEEEeecCCcccCCCCCCccc
Q 042216 558 TLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKV-IIHRDVKTTNILLDEEW-VAKVSDFGLCKFGPNFSKTHV 635 (767)
Q Consensus 558 sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-iiH~Dlk~~NILld~~~-~~ki~DfGla~~~~~~~~~~~ 635 (767)
+|.++|++.....+++..+++++.|||+||.||| +.+ |||||||++|||++.++ ++||+|||+++...... ..
T Consensus 126 sL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~--~~ 200 (362)
T KOG0192|consen 126 SLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK--TS 200 (362)
T ss_pred cHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc--cc
Confidence 9999998755667999999999999999999999 666 99999999999999998 99999999998643211 23
Q ss_pred cccccCCCcccChhhhc--cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccC
Q 042216 636 STQVKGSIGYLDPEYYR--LQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKG 713 (767)
Q Consensus 636 ~~~~~gt~~y~aPE~~~--~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 713 (767)
.+...||..|||||++. ...++.|+||||||++||||+||+.||...... .... .. +....+.
T Consensus 201 ~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~---~~~~---~v---------~~~~~Rp 265 (362)
T KOG0192|consen 201 MTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV---QVAS---AV---------VVGGLRP 265 (362)
T ss_pred ccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH---HHHH---HH---------HhcCCCC
Confidence 34468999999999999 669999999999999999999999999665441 1111 11 1122344
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhh
Q 042216 714 NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQLL 755 (767)
Q Consensus 714 ~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~~ 755 (767)
..+..++..+..++.+||+.||..||++.+++.+|+.+....
T Consensus 266 ~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~ 307 (362)
T KOG0192|consen 266 PIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHI 307 (362)
T ss_pred CCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhh
Confidence 455668889999999999999999999999999999887644
No 5
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4e-47 Score=406.07 Aligned_cols=253 Identities=32% Similarity=0.502 Sum_probs=220.7
Q ss_pred cceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCC
Q 042216 479 NLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGT 558 (767)
Q Consensus 479 ~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gs 558 (767)
..+.||+|-||.||+|.+++. ..||+|.++.. ....+.|.+|+++|++|+|+|||+++|+|..++.++||||||+.|+
T Consensus 210 l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~Gs 287 (468)
T KOG0197|consen 210 LIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGS 287 (468)
T ss_pred HHHHhcCCccceEEEEEEcCC-CcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCc
Confidence 344799999999999999854 68999999865 3445679999999999999999999999999889999999999999
Q ss_pred hhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcccccc
Q 042216 559 LRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQ 638 (767)
Q Consensus 559 L~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~ 638 (767)
|.++|+...+..+...+.+.++.|||+||+||+ ++++|||||.++||||+++..+||+||||+|...+ ..-.....
T Consensus 288 Ll~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d-~~Y~~~~~ 363 (468)
T KOG0197|consen 288 LLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGD-DEYTASEG 363 (468)
T ss_pred HHHHhhhcCCCccchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEcccccccccCC-CceeecCC
Confidence 999998866778999999999999999999999 88899999999999999999999999999995433 22334445
Q ss_pred ccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCCh
Q 042216 639 VKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPP 717 (767)
Q Consensus 639 ~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 717 (767)
..-++.|.|||.+..+.++.|||||||||+||||+| |+.||..+...+.. +.++...+-+.|.
T Consensus 364 ~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~----------------~~le~GyRlp~P~ 427 (468)
T KOG0197|consen 364 GKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVL----------------ELLERGYRLPRPE 427 (468)
T ss_pred CCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHH----------------HHHhccCcCCCCC
Confidence 566789999999999999999999999999999998 99998766543222 2334455667899
Q ss_pred hhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 042216 718 VCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQ 753 (767)
Q Consensus 718 ~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~ 753 (767)
.|+.++.++|..||+.+|++|||++.+.+.|+.+..
T Consensus 428 ~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 428 GCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred CCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 999999999999999999999999999999987764
No 6
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=9.9e-46 Score=413.32 Aligned_cols=261 Identities=30% Similarity=0.520 Sum_probs=223.1
Q ss_pred hccccceeeeccCcEEEEEEEecC-----CCceEEEEEeCCCCCc-chhHHHHHHHHHhccccceeeeEeeeeecCCceE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNG-----DSTPVAIKRLNPGSQQ-GALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMI 548 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~~vAVK~l~~~~~~-~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~ 548 (767)
.+....+.||+|.||+||+|+..+ ..+.||||.+++.... ..++|++|+++|..|+|||||+|+|.|.+++.++
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~ 565 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC 565 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence 344555679999999999998743 3468999999987655 7789999999999999999999999999999999
Q ss_pred EEEecCCCCChhhhhccCC------------CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcE
Q 042216 549 LVYDYMARGTLRDHLYNND------------NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVA 616 (767)
Q Consensus 549 lV~ey~~~gsL~~~L~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ 616 (767)
||+|||..|+|.+||+... ..+|+..+.+.||.|||.||.||- ++.+|||||..+|+||.++..|
T Consensus 566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRDLATRNCLVge~l~V 642 (774)
T KOG1026|consen 566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS---SHHFVHRDLATRNCLVGENLVV 642 (774)
T ss_pred EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCcccccchhhhhceeccceEE
Confidence 9999999999999996421 234899999999999999999999 7889999999999999999999
Q ss_pred EEeecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHH
Q 042216 617 KVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWAT 695 (767)
Q Consensus 617 ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~ 695 (767)
||+||||+|.....+.-.......-+++|||||.+..++||.+||||||||+|||+++ |+.||.+....+..
T Consensus 643 KIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVI------- 715 (774)
T KOG1026|consen 643 KISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVI------- 715 (774)
T ss_pred EecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHH-------
Confidence 9999999996544444443334456789999999999999999999999999999998 99999887765433
Q ss_pred HHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 042216 696 ECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQL 754 (767)
Q Consensus 696 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~ 754 (767)
+.++++.+ -..|..|+.++++||..||+.+|.+||+++||-..|+...+.
T Consensus 716 e~i~~g~l---------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 716 ECIRAGQL---------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA 765 (774)
T ss_pred HHHHcCCc---------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence 33344443 346889999999999999999999999999999999877644
No 7
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=4e-45 Score=373.83 Aligned_cols=251 Identities=25% Similarity=0.359 Sum_probs=209.0
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecCC-ceEEEEecC
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDG-QMILVYDYM 554 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~-~~~lV~ey~ 554 (767)
++.++.||+|..|+|||+.++.+++.+|+|.+.... ..-.+++.+|++++++.+||+||.++|.|..++ +..++||||
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYM 160 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYM 160 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhc
Confidence 445568999999999999999999999999996543 344567999999999999999999999999888 599999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
++|||++++.+. +.+++...-+|+.+|++||.|||+ .++||||||||+|||++..|++||||||.++...+.
T Consensus 161 DgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS---- 232 (364)
T KOG0581|consen 161 DGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS---- 232 (364)
T ss_pred CCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh----
Confidence 999999999654 569999999999999999999995 488999999999999999999999999999865331
Q ss_pred ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCC
Q 042216 635 VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGN 714 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 714 (767)
......||..|||||.+.++.|+.++||||||+.++|+++|+.|+....+. .....+..... -.+.. ..
T Consensus 233 ~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~-~~~~~~Ll~~I-v~~pp---------P~ 301 (364)
T KOG0581|consen 233 IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPP-YLDIFELLCAI-VDEPP---------PR 301 (364)
T ss_pred hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCC-CCCHHHHHHHH-hcCCC---------CC
Confidence 445678999999999999999999999999999999999999999664111 11111111111 11111 11
Q ss_pred CCh-hhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 715 APP-VCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 715 ~~~-~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.|. .+++++..++..||++||.+||++.|+++
T Consensus 302 lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 302 LPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred CCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 233 38889999999999999999999999984
No 8
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=9e-45 Score=396.77 Aligned_cols=273 Identities=26% Similarity=0.440 Sum_probs=231.1
Q ss_pred cccCHHHHHHHhhc---------cccceeeeccCcEEEEEEEecCCC---ceEEEEEeCCC-CCcchhHHHHHHHHHhcc
Q 042216 463 TQFSISEIKEATKD---------FNNLLIIGRGGFGNVYKGFLNGDS---TPVAIKRLNPG-SQQGALEFQTEIGMLSQL 529 (767)
Q Consensus 463 ~~~~~~ei~~~t~~---------f~~~~~LG~G~fG~Vy~g~~~~~~---~~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l 529 (767)
..++|++-.+|... ..+.++||.|.||.|++|.++..+ ..||||.++.. .+....+|+.|+.||.++
T Consensus 608 DP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF 687 (996)
T KOG0196|consen 608 DPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF 687 (996)
T ss_pred CCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC
Confidence 34566665544433 345568999999999999997544 57999999876 455667899999999999
Q ss_pred ccceeeeEeeeeecCCceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeE
Q 042216 530 RYLHLVSLIGYCNDDGQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNIL 609 (767)
Q Consensus 530 ~Hpniv~l~g~~~~~~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NIL 609 (767)
.||||++|.|+.......++|.|||++|+|+.||+.++++ +++.++..++.+||.||.||. +.++|||||.++|||
T Consensus 688 dHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGq-ftviQLVgMLrGIAsGMkYLs---dm~YVHRDLAARNIL 763 (996)
T KOG0196|consen 688 DHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIASGMKYLS---DMNYVHRDLAARNIL 763 (996)
T ss_pred CCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCc-eEeehHHHHHHHHHHHhHHHh---hcCchhhhhhhhhee
Confidence 9999999999999999999999999999999999988754 999999999999999999999 788999999999999
Q ss_pred ECCCCcEEEeecCCcccCCCCCCcc-ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccc
Q 042216 610 LDEEWVAKVSDFGLCKFGPNFSKTH-VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQ 687 (767)
Q Consensus 610 ld~~~~~ki~DfGla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~ 687 (767)
++.+..+|++||||+|...+..... .+...+-+++|.|||.+...++|..|||||||+||||+++ |..||..+.+.+.
T Consensus 764 VNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdV 843 (996)
T KOG0196|consen 764 VNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 843 (996)
T ss_pred eccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHH
Confidence 9999999999999999765544222 2223345679999999999999999999999999999987 9999977655322
Q ss_pred hhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhh
Q 042216 688 VNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQLL 755 (767)
Q Consensus 688 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~~ 755 (767)
. +.++...+-+.|++|+..|.+||+.||++|..+||++.||+..|++++..+
T Consensus 844 I----------------kaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP 895 (996)
T KOG0196|consen 844 I----------------KAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNP 895 (996)
T ss_pred H----------------HHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCc
Confidence 2 223334566778999999999999999999999999999999999998655
No 9
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-43 Score=364.36 Aligned_cols=203 Identities=32% Similarity=0.467 Sum_probs=182.0
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
..+|...+.||+|+||+||+|+++..+..||||.+... .....+.+..|+.+|+.++|||||.|++++...+.++|||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 35677777899999999999999999999999999766 4444556889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCC------CcEEEeecCCcc
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEE------WVAKVSDFGLCK 625 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~------~~~ki~DfGla~ 625 (767)
|||.+|+|.+||++.. .+++.....++.|+|.||++|| +++||||||||+||||+.. -.+||+|||+||
T Consensus 89 EyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred EeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 9999999999997654 5999999999999999999999 8889999999999999764 568999999999
Q ss_pred cCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Q 042216 626 FGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGD 684 (767)
Q Consensus 626 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~ 684 (767)
.... .......+|++-|||||++..++|+.|+|+||.|++|||+++|++||.....
T Consensus 164 ~L~~---~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~ 219 (429)
T KOG0595|consen 164 FLQP---GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETP 219 (429)
T ss_pred hCCc---hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCH
Confidence 7653 3345678999999999999999999999999999999999999999965443
No 10
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.6e-43 Score=377.39 Aligned_cols=248 Identities=23% Similarity=0.345 Sum_probs=212.2
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
..|...++||+|||++||.++....+..||+|++.+. .....+...+||++.+.|+|||||++++++++.+..|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5688889999999999999999778899999999654 3445567899999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
|+|++|+|.++++ .++++++.++..++.||+.||.||| +++|+|||||..|+||++++++||+|||||......
T Consensus 98 ELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~- 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD- 171 (592)
T ss_pred EecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHH---hcCceecccchhheeecCcCcEEecccceeeeecCc-
Confidence 9999999999996 4567999999999999999999999 888999999999999999999999999999876432
Q ss_pred CccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccc
Q 042216 632 KTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFL 711 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 711 (767)
.......+||+.|+|||++.....+..+||||+||+||-|++|++||....-.+. ... +.. .
T Consensus 172 -~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vket------y~~-Ik~---~------- 233 (592)
T KOG0575|consen 172 -GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKET------YNK-IKL---N------- 233 (592)
T ss_pred -ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHH------HHH-HHh---c-------
Confidence 2345678999999999999999999999999999999999999999954432211 111 110 0
Q ss_pred cCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 712 KGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 712 ~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
....|...+.+..+||.++|+.||.+|||+++|+.
T Consensus 234 ~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 234 EYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred CcccccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 01234456677889999999999999999999984
No 11
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.1e-43 Score=345.81 Aligned_cols=256 Identities=27% Similarity=0.402 Sum_probs=210.1
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeee-eecCCc-eEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGY-CNDDGQ-MILV 550 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~-~~~~~~-~~lV 550 (767)
.+|++++.||+|.||+|||+....++..+|.|.++-. ..+..+.+..|+.+|++|+|||||+.+++ +.++.+ +++|
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 3577888999999999999999888999999988743 45566779999999999999999999983 445555 8999
Q ss_pred EecCCCCChhhhhcc--CCCCCCChHHHHHHHHHHHHHHHHhHhCCCCC--eEecCCCCCCeEECCCCcEEEeecCCccc
Q 042216 551 YDYMARGTLRDHLYN--NDNPPLPWDRRLKICIGAARALHYLHTGASKV--IIHRDVKTTNILLDEEWVAKVSDFGLCKF 626 (767)
Q Consensus 551 ~ey~~~gsL~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--iiH~Dlk~~NILld~~~~~ki~DfGla~~ 626 (767)
||||..|+|.+.++. +..+.+++..+++++.|++.||..+|... +. |+||||||.||+|+.+|.+||+||||+++
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 999999999999853 44567999999999999999999999422 34 99999999999999999999999999998
Q ss_pred CCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccc
Q 042216 627 GPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDI 706 (767)
Q Consensus 627 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 706 (767)
... ........+||+.||+||.+....|+.||||||+||++|||+.-++||.+. ++.. ....+.++....
T Consensus 178 l~s--~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~------n~~~-L~~KI~qgd~~~- 247 (375)
T KOG0591|consen 178 LSS--KTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD------NLLS-LCKKIEQGDYPP- 247 (375)
T ss_pred hcc--hhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc------cHHH-HHHHHHcCCCCC-
Confidence 653 233445678999999999999999999999999999999999999999765 1222 223334443222
Q ss_pred ccccccCCCC-hhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 042216 707 IDPFLKGNAP-PVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLE 749 (767)
Q Consensus 707 ~d~~l~~~~~-~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~ 749 (767)
.| ...+.++.+|+..|+..||+.||+...++..+.
T Consensus 248 --------~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 248 --------LPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred --------CcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 23 456888999999999999999998555554443
No 12
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-42 Score=357.20 Aligned_cols=253 Identities=25% Similarity=0.335 Sum_probs=205.1
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCc-------chhHHHHHHHHHhccccceeeeEeeeeecCCc
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQ-------GALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQ 546 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~-------~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~ 546 (767)
.+.|...+.||+|+||.|-+|..+.+++.||||++++.... ......+|+++|++|+|||||++.+++...+.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 34567778999999999999999999999999999754211 12235799999999999999999999999999
Q ss_pred eEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCC---CcEEEeecCC
Q 042216 547 MILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEE---WVAKVSDFGL 623 (767)
Q Consensus 547 ~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~---~~~ki~DfGl 623 (767)
.|||||||++|.|.+++-.+ +.+.+..-..++.|++.|+.||| +++|+||||||+|||+..+ ..+||+|||+
T Consensus 251 ~YmVlE~v~GGeLfd~vv~n--k~l~ed~~K~~f~Qll~avkYLH---~~GI~HRDiKPeNILl~~~~e~~llKItDFGl 325 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVAN--KYLREDLGKLLFKQLLTAVKYLH---SQGIIHRDIKPENILLSNDAEDCLLKITDFGL 325 (475)
T ss_pred eEEEEEEecCccHHHHHHhc--cccccchhHHHHHHHHHHHHHHH---HcCcccccCCcceEEeccCCcceEEEecccch
Confidence 99999999999999999654 34778888999999999999999 8899999999999999755 8899999999
Q ss_pred cccCCCCCCccccccccCCCcccChhhhccCCC---CchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhc
Q 042216 624 CKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLL---TEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRN 700 (767)
Q Consensus 624 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~ 700 (767)
|+... ....+...+||+.|.|||++.++.. ..|.|+||+||+||-+++|.+||...... ..+.+ .+..
T Consensus 326 AK~~g---~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~--~sl~e----QI~~ 396 (475)
T KOG0615|consen 326 AKVSG---EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTD--PSLKE----QILK 396 (475)
T ss_pred hhccc---cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCC--ccHHH----HHhc
Confidence 99754 3345667899999999999987543 34789999999999999999999654321 11221 1222
Q ss_pred CCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 701 GKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 701 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
|+... ........+++.+++|.+||..||++|||+.|++.
T Consensus 397 G~y~f------~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 397 GRYAF------GPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred Ccccc------cChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 22110 11123356788999999999999999999999984
No 13
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-42 Score=372.59 Aligned_cols=266 Identities=27% Similarity=0.473 Sum_probs=214.8
Q ss_pred HHHHHhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeecCCc
Q 042216 469 EIKEATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQ 546 (767)
Q Consensus 469 ei~~~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~ 546 (767)
+...-.+++.....||+|.||+||+|.+.+ .||||+++.. ..+..+.|.+|+..+++-||.||+-++|||.....
T Consensus 386 ~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~ 462 (678)
T KOG0193|consen 386 EWEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL 462 (678)
T ss_pred ccccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence 333344556667789999999999999986 4999999765 34467789999999999999999999999988766
Q ss_pred eEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCccc
Q 042216 547 MILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKF 626 (767)
Q Consensus 547 ~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~ 626 (767)
.+|+.+|++-+|..||+... ..++..+.+.|+.|+|+||.||| .++|||||||+.||||.++++|||+||||+..
T Consensus 463 -AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~kVkIgDFGLatv 537 (678)
T KOG0193|consen 463 -AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLHEDLKVKIGDFGLATV 537 (678)
T ss_pred -eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEccCCcEEEecccceee
Confidence 99999999999999998655 46899999999999999999999 89999999999999999999999999999875
Q ss_pred CCCCCCccccccccCCCcccChhhhcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCc
Q 042216 627 GPNFSKTHVSTQVKGSIGYLDPEYYRL---QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKI 703 (767)
Q Consensus 627 ~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~ 703 (767)
..............|...|||||+++. .+|++.|||||||+|+|||+||..||. ....++. .|+ +..|.+
T Consensus 538 k~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~dqI---ifm---VGrG~l 610 (678)
T KOG0193|consen 538 KTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNRDQI---IFM---VGRGYL 610 (678)
T ss_pred eeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCChhhe---EEE---eccccc
Confidence 433333333445568889999999975 479999999999999999999999997 3222211 010 011100
Q ss_pred cccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 042216 704 GDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQL 754 (767)
Q Consensus 704 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~ 754 (767)
..|. ......|+.+|.+|+..||..++++||.+.+|+.+|+.++..
T Consensus 611 --~pd~---s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 611 --MPDL---SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred --Cccc---hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 0111 012346888999999999999999999999999999988763
No 14
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=3e-41 Score=358.37 Aligned_cols=263 Identities=29% Similarity=0.452 Sum_probs=219.6
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCc-chhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQ-GALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~-~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
.....+.||+|-||.|.++...+ ...||||+++..... ...+|.+|+++|.+|+||||+.|+|.|..++.+++|+|||
T Consensus 539 ~L~~~ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm 617 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEVEG-PLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM 617 (807)
T ss_pred heehhhhhcCcccceeEEEEecC-ceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence 45556689999999999999975 589999999987544 4578999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
++|+|.+||.++....+.-...++||.|||.||+||. +..++||||.++|||+|.++++||+|||++|-......-+
T Consensus 618 EnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~ 694 (807)
T KOG1094|consen 618 ENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYR 694 (807)
T ss_pred hcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHH---hhchhhccccccceeecCcccEEecCcccccccccCCcee
Confidence 9999999998775555667788899999999999999 7889999999999999999999999999999655545555
Q ss_pred ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHH--hCCCCCCCCCCccchhHHHHHHHHhhcCCcccccccccc
Q 042216 635 VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVL--CARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLK 712 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ell--tg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 712 (767)
+....+-+++|||||.+..+++|.+||||+||++|||++ |...||....++. ..+-....+..+.. ...
T Consensus 695 vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~---vven~~~~~~~~~~------~~~ 765 (807)
T KOG1094|consen 695 VQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ---VVENAGEFFRDQGR------QVV 765 (807)
T ss_pred eecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH---HHHhhhhhcCCCCc------cee
Confidence 555667789999999999999999999999999999985 6889997655432 22222222222211 112
Q ss_pred CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 042216 713 GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFV 751 (767)
Q Consensus 713 ~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~ 751 (767)
-..|+.|+.++++++++||..|..+||+++++...|+..
T Consensus 766 l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 766 LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 234778999999999999999999999999999888754
No 15
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-41 Score=346.25 Aligned_cols=243 Identities=29% Similarity=0.399 Sum_probs=205.2
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEE
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILV 550 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV 550 (767)
.++|+.+++||+|+||+||.++.++.++.+|+|++++. ...+.+....|..+|.+++||.||++.-.+++.+.+|||
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 46899999999999999999999999999999999765 233455678999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCC
Q 042216 551 YDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNF 630 (767)
Q Consensus 551 ~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~ 630 (767)
+||+.||.|..+|.++. .+++....-.+..|+.||.||| +.+||||||||+|||||++|.++|+||||++..-.
T Consensus 104 ld~~~GGeLf~hL~~eg--~F~E~~arfYlaEi~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~- 177 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREG--RFSEDRARFYLAEIVLALGYLH---SKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK- 177 (357)
T ss_pred EeccCCccHHHHHHhcC--CcchhHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHeeecCCCcEEEeccccchhccc-
Confidence 99999999999996554 4888888889999999999999 88999999999999999999999999999986432
Q ss_pred CCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccccc
Q 042216 631 SKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPF 710 (767)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 710 (767)
....+...+||+.|||||++....++..+|.||+|+++|||++|.+||...... .+.... ..++
T Consensus 178 -~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~------~~~~~I-~~~k-------- 241 (357)
T KOG0598|consen 178 -DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVK------KMYDKI-LKGK-------- 241 (357)
T ss_pred -CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHH------HHHHHH-hcCc--------
Confidence 233455689999999999999999999999999999999999999999655432 222221 1111
Q ss_pred ccCCCChhhHHHHHHHHHHccccCCCCCC
Q 042216 711 LKGNAPPVCLNQFVEVAMSCVNDDRIRRP 739 (767)
Q Consensus 711 l~~~~~~~~~~~l~~li~~Cl~~dp~~RP 739 (767)
....+.-...+..+++...+..||++|.
T Consensus 242 -~~~~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 242 -LPLPPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred -CCCCCccCCHHHHHHHHHHhccCHHHhc
Confidence 0112223566788999999999999996
No 16
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-41 Score=393.07 Aligned_cols=261 Identities=28% Similarity=0.476 Sum_probs=217.9
Q ss_pred ccccceeeeccCcEEEEEEEecCCC-----ceEEEEEeCCC-CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEE
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDS-----TPVAIKRLNPG-SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMIL 549 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~-----~~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~l 549 (767)
+....+.||+|.||.||.|...+.. ..||||.+... +.++..+|.+|..+|++++|||||+++|+|.+....++
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i 772 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLI 772 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEE
Confidence 3445567999999999999986443 34999999766 55667789999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCC-----CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCc
Q 042216 550 VYDYMARGTLRDHLYNND-----NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLC 624 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla 624 (767)
++|||++|+|..||++.+ ...|+...++.++.|||+|+.||+ +++.|||||.++|+||++...+||+|||||
T Consensus 773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~VKIaDFGlA 849 (1025)
T KOG1095|consen 773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE---SKHFVHRDLAARNCLLDERRVVKIADFGLA 849 (1025)
T ss_pred EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH---hCCCcCcchhhhheeecccCcEEEcccchh
Confidence 999999999999998752 346899999999999999999999 788999999999999999999999999999
Q ss_pred ccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCc
Q 042216 625 KFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKI 703 (767)
Q Consensus 625 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~ 703 (767)
+...............-...|||||.+..+.++.|+|||||||+|||++| |..||......+... .....+
T Consensus 850 rDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~------~~~~gg-- 921 (1025)
T KOG1095|consen 850 RDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLL------DVLEGG-- 921 (1025)
T ss_pred HhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHH------HHHhCC--
Confidence 95433222222222345679999999999999999999999999999998 899996655432211 111222
Q ss_pred cccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhh
Q 042216 704 GDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQLL 755 (767)
Q Consensus 704 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~~ 755 (767)
+-+.|..|++.++++|.+||+.+|++||++..++++++.+.+..
T Consensus 922 --------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 922 --------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred --------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 23457889999999999999999999999999999999887654
No 17
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.2e-40 Score=360.53 Aligned_cols=262 Identities=25% Similarity=0.422 Sum_probs=207.1
Q ss_pred hhccccceeeeccCcEEEEEEEec-----CCCceEEEEEeCCCC-CcchhHHHHHHHHHhcc-ccceeeeEeeeeecC-C
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLN-----GDSTPVAIKRLNPGS-QQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDD-G 545 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~-----~~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~-~ 545 (767)
.++|...+.||+|+||.||+|.+. ..+..||||++.... ......+.+|+.++.++ +||||++++++|... +
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 357888889999999999999752 233579999987543 23345789999999999 899999999998764 4
Q ss_pred ceEEEEecCCCCChhhhhccCC----------------------------------------------------------
Q 042216 546 QMILVYDYMARGTLRDHLYNND---------------------------------------------------------- 567 (767)
Q Consensus 546 ~~~lV~ey~~~gsL~~~L~~~~---------------------------------------------------------- 567 (767)
.++++|||+++|+|.+++....
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 6899999999999999986421
Q ss_pred --CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccccccCCCcc
Q 042216 568 --NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQVKGSIGY 645 (767)
Q Consensus 568 --~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y 645 (767)
..++++.+++.++.|+++||.||| +++|+||||||+|||+++++.+||+|||+++...............++..|
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y 242 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW 242 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence 135888999999999999999999 788999999999999999999999999999754322111122234467889
Q ss_pred cChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhhHHHHH
Q 042216 646 LDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFV 724 (767)
Q Consensus 646 ~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~ 724 (767)
+|||++.+..++.++|||||||+||||++ |+.||......+ .+ ......+.. ...+..++..+.
T Consensus 243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~--~~----~~~~~~~~~---------~~~~~~~~~~l~ 307 (338)
T cd05102 243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE--EF----CQRLKDGTR---------MRAPENATPEIY 307 (338)
T ss_pred cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH--HH----HHHHhcCCC---------CCCCCCCCHHHH
Confidence 99999999999999999999999999997 999996543221 11 111111111 112344567899
Q ss_pred HHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 042216 725 EVAMSCVNDDRIRRPSMSDVVWGLEFVFQ 753 (767)
Q Consensus 725 ~li~~Cl~~dp~~RPs~~evl~~L~~~~~ 753 (767)
+++.+||+.||.+|||+.||++.|+.+++
T Consensus 308 ~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 308 RIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999999998875
No 18
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.9e-41 Score=333.96 Aligned_cols=265 Identities=24% Similarity=0.301 Sum_probs=209.2
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC-cc-hhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEe
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ-QG-ALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~-~~-~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~e 552 (767)
+.|+.+.++|+|+||.|||++.+++++.||||++..... .. .+--++||++|++|+|+|+|.|+.+|.....++||+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 357777899999999999999999999999999975533 22 3346899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK 632 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~ 632 (767)
||+. ++.+-|.+.. ..++.+...+++.|++.|+.|+| ++++|||||||+||||+.++.+||||||+|+.... .
T Consensus 82 ~~dh-TvL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~--p 154 (396)
T KOG0593|consen 82 YCDH-TVLHELERYP-NGVPSELVKKYLYQLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA--P 154 (396)
T ss_pred ecch-HHHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhh---hcCeecccCChhheEEecCCcEEeccchhhHhhcC--C
Confidence 9998 5555554433 35889999999999999999999 88899999999999999999999999999997653 3
Q ss_pred ccccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHH--------Hhh-cCC
Q 042216 633 THVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATE--------CYR-NGK 702 (767)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~--------~~~-~~~ 702 (767)
....+..+.|..|.|||.+.+ .+|....||||.||++.||++|.+-|.+..+.++..++..... .+. ...
T Consensus 155 gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~ 234 (396)
T KOG0593|consen 155 GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPF 234 (396)
T ss_pred cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCc
Confidence 344566778899999999887 6899999999999999999999999977766555544432111 111 111
Q ss_pred cccccccccc-----CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 703 IGDIIDPFLK-----GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 703 ~~~~~d~~l~-----~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
...+.-|... ...-+..+.-+++++..|++.||.+|++-+|++.
T Consensus 235 F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 235 FHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred eeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 1111111110 0111223456899999999999999999999984
No 19
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-41 Score=364.25 Aligned_cols=254 Identities=30% Similarity=0.445 Sum_probs=212.1
Q ss_pred eeeeccCcEEEEEEEecCCC---ce-EEEEEeCC---CCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 481 LIIGRGGFGNVYKGFLNGDS---TP-VAIKRLNP---GSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 481 ~~LG~G~fG~Vy~g~~~~~~---~~-vAVK~l~~---~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
+.||+|+||.||+|.++..+ .. ||||..+. .......+|++|++++++++|||||+++|++..+..+++|||+
T Consensus 163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl 242 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMEL 242 (474)
T ss_pred ceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEe
Confidence 58999999999999986542 23 89999875 2456677899999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
|+||+|.++|++... .++..+++.+|.++|+||+||| +++++||||.++|||++.++.+||+||||++......
T Consensus 243 ~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~-- 316 (474)
T KOG0194|consen 243 CNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLH---SKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYV-- 316 (474)
T ss_pred cCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHH---HCCCcchhHhHHHheecCCCeEEeCccccccCCccee--
Confidence 999999999977654 6999999999999999999999 8889999999999999999999999999998654211
Q ss_pred cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCcccccccccc
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLK 712 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 712 (767)
.......-+..|+|||.+..+.++.++|||||||++||+++ |..||.+.... .+..++ +-...+
T Consensus 317 ~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~---~v~~kI------------~~~~~r 381 (474)
T KOG0194|consen 317 MKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY---EVKAKI------------VKNGYR 381 (474)
T ss_pred eccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH---HHHHHH------------HhcCcc
Confidence 11112246789999999999999999999999999999998 88899665432 111111 111233
Q ss_pred CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhh
Q 042216 713 GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQLL 755 (767)
Q Consensus 713 ~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~~ 755 (767)
...+...+.++..++.+||..+|++||+|.++.+.|+.+....
T Consensus 382 ~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~ 424 (474)
T KOG0194|consen 382 MPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKK 424 (474)
T ss_pred CCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcc
Confidence 3445567888899999999999999999999999999887654
No 20
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-40 Score=345.37 Aligned_cols=256 Identities=25% Similarity=0.362 Sum_probs=206.9
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCC--ceEEEEec
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDG--QMILVYDY 553 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~--~~~lV~ey 553 (767)
++...+.||+|+||+||++...+.+...|||..........+.+.+|+.+|.+++|||||+.+|...... .+++.|||
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy 97 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEY 97 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeec
Confidence 4566678999999999999998878899999986553333667899999999999999999999855444 68999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECC-CCcEEEeecCCcccCCC-CC
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDE-EWVAKVSDFGLCKFGPN-FS 631 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~-~~~~ki~DfGla~~~~~-~~ 631 (767)
+++|+|.+++.+... .|++..+.....|+++||.||| +++|+||||||+|||++. ++.+||+|||+++.... ..
T Consensus 98 ~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~ 173 (313)
T KOG0198|consen 98 APGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT 173 (313)
T ss_pred cCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCccccccccccc
Confidence 999999999987766 7999999999999999999999 899999999999999999 79999999999886442 11
Q ss_pred CccccccccCCCcccChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccccc
Q 042216 632 KTHVSTQVKGSIGYLDPEYYRLQ-LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPF 710 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 710 (767)
.........||+.|||||++..+ ....++|||||||++.||+||++||....+ ...+........
T Consensus 174 ~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~-----~~~~~~~ig~~~--------- 239 (313)
T KOG0198|consen 174 KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFE-----EAEALLLIGRED--------- 239 (313)
T ss_pred cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcc-----hHHHHHHHhccC---------
Confidence 12223457799999999999953 344599999999999999999999965311 111111111111
Q ss_pred ccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 042216 711 LKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLE 749 (767)
Q Consensus 711 l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~ 749 (767)
.....|...+.+..+++..|++.+|++|||++++++..-
T Consensus 240 ~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf 278 (313)
T KOG0198|consen 240 SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPF 278 (313)
T ss_pred CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChh
Confidence 112456667788999999999999999999999997643
No 21
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=5.7e-39 Score=396.72 Aligned_cols=266 Identities=27% Similarity=0.450 Sum_probs=221.9
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
...+...++||+|+||.||+|+...++..||||++...... ...|++++++++||||++++++|.+.+..++||||
T Consensus 689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey 764 (968)
T PLN00113 689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEY 764 (968)
T ss_pred HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeC
Confidence 45677888999999999999999877899999998643322 23568899999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
|++|+|.++++ .++|.++.+|+.|+|+||+|||+.++++|+||||||+||+++.++.+++. ||.......
T Consensus 765 ~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~---- 834 (968)
T PLN00113 765 IEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT---- 834 (968)
T ss_pred CCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc----
Confidence 99999999994 38999999999999999999998778899999999999999999988876 665443211
Q ss_pred cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccC
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKG 713 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 713 (767)
.....++..|||||++.+..++.++|||||||++|||++|+.|+.... .....+..|+............+|+.+..
T Consensus 835 --~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (968)
T PLN00113 835 --DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEF-GVHGSIVEWARYCYSDCHLDMWIDPSIRG 911 (968)
T ss_pred --CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCccc-CCCCcHHHHHHHhcCccchhheeCccccC
Confidence 122357899999999999999999999999999999999999985332 22345777877766666666777777754
Q ss_pred C--CChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhhh
Q 042216 714 N--APPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQLLR 756 (767)
Q Consensus 714 ~--~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~~~ 756 (767)
. .+..+..++.+++.+||+.||++||+|.||+++|+.+.+...
T Consensus 912 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~~ 956 (968)
T PLN00113 912 DVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSSS 956 (968)
T ss_pred CCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcccc
Confidence 3 345667788999999999999999999999999999876553
No 22
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-41 Score=355.07 Aligned_cols=254 Identities=28% Similarity=0.477 Sum_probs=213.7
Q ss_pred cccCHHHHHHHhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeee
Q 042216 463 TQFSISEIKEATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCN 542 (767)
Q Consensus 463 ~~~~~~ei~~~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~ 542 (767)
.++.+++|. +++-||.|+.|-||+|++++ ..||||+++.- -..+|+.|++|+|+||+.+.|+|.
T Consensus 119 WeiPFe~Is-------ELeWlGSGaQGAVF~Grl~n--etVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCt 182 (904)
T KOG4721|consen 119 WEIPFEEIS-------ELEWLGSGAQGAVFLGRLHN--ETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCT 182 (904)
T ss_pred ccCCHHHhh-------hhhhhccCcccceeeeeccC--ceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeec
Confidence 445566553 44579999999999999986 68999987522 146799999999999999999999
Q ss_pred cCCceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecC
Q 042216 543 DDGQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFG 622 (767)
Q Consensus 543 ~~~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfG 622 (767)
....+++|||||..|-|...|+.. .+++-.....+..+||.||.||| .+.|||||||+-||||..+..+||+|||
T Consensus 183 qsPcyCIiMEfCa~GqL~~VLka~--~~itp~llv~Wsk~IA~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIsDFG 257 (904)
T KOG4721|consen 183 QSPCYCIIMEFCAQGQLYEVLKAG--RPITPSLLVDWSKGIAGGMNYLH---LHKIIHRDLKSPNILISYDDVVKISDFG 257 (904)
T ss_pred CCceeEEeeeccccccHHHHHhcc--CccCHHHHHHHHHHhhhhhHHHH---HhhHhhhccCCCceEeeccceEEecccc
Confidence 999999999999999999999554 46888999999999999999999 7889999999999999999999999999
Q ss_pred CcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCC
Q 042216 623 LCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGK 702 (767)
Q Consensus 623 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~ 702 (767)
-++.... .......+||..|||||+++..+.++|.||||||||||||+||..||...+... +.|
T Consensus 258 TS~e~~~---~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA----IIw--------- 321 (904)
T KOG4721|consen 258 TSKELSD---KSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA----IIW--------- 321 (904)
T ss_pred chHhhhh---hhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe----eEE---------
Confidence 9886433 223445789999999999999999999999999999999999999996554321 111
Q ss_pred ccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhh
Q 042216 703 IGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQLL 755 (767)
Q Consensus 703 ~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~~ 755 (767)
.+-...|.-..|..|++-+.-|+++||+..|..||++++++..|+-....+
T Consensus 322 --GVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pel 372 (904)
T KOG4721|consen 322 --GVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPEL 372 (904)
T ss_pred --eccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHH
Confidence 112234555678899999999999999999999999999999998665443
No 23
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=354.14 Aligned_cols=260 Identities=27% Similarity=0.425 Sum_probs=225.4
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
..+....++||-|.||.||.|.++.-...||||.++.+ ....++|+.|..+|+.++|||+|+|+|+|..+..+|+|+||
T Consensus 266 RtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEf 344 (1157)
T KOG4278|consen 266 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEF 344 (1157)
T ss_pred chheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEec
Confidence 34556667899999999999999988889999999855 45678999999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
|..|+|.+||++..+..++--.++.++.||+.||.||. .+.+|||||.++|+|+.++..+||+||||+++......+
T Consensus 345 M~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYT 421 (1157)
T KOG4278|consen 345 MCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYT 421 (1157)
T ss_pred ccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHH---HhhhhhhhhhhhhccccccceEEeeccchhhhhcCCcee
Confidence 99999999999988888898999999999999999999 788999999999999999999999999999986543222
Q ss_pred cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCcccccccccc
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLK 712 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 712 (767)
. .....-.+.|.|||-+....++.|+|||+|||+|||+.| |..||-+.+-. .+.. +++...+
T Consensus 422 A-HAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS-------qVY~---------LLEkgyR 484 (1157)
T KOG4278|consen 422 A-HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-------QVYG---------LLEKGYR 484 (1157)
T ss_pred c-ccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH-------HHHH---------HHhcccc
Confidence 1 122345678999999999999999999999999999998 88998654321 1222 3334456
Q ss_pred CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 042216 713 GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQL 754 (767)
Q Consensus 713 ~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~ 754 (767)
.+.|..|++++++||+.||+.+|.+||++.|+-+.+|.+++.
T Consensus 485 M~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~ 526 (1157)
T KOG4278|consen 485 MDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSS 526 (1157)
T ss_pred ccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcc
Confidence 677899999999999999999999999999999999998753
No 24
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-39 Score=337.71 Aligned_cols=263 Identities=24% Similarity=0.295 Sum_probs=213.7
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC-CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEe
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG-SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~e 552 (767)
.++|+..++||.|..+.||+|.....+..||||++... .....+++.+|+..++.++||||++.+..+..+..+|+||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 45788888999999999999999888899999999754 34446889999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC-
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS- 631 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~- 631 (767)
||.+||+.+.++..-...+++..+..|.+++++||.||| .++.||||||+.||||+.+|.+||+|||.+.......
T Consensus 105 fMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~ 181 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD 181 (516)
T ss_pred hhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHH---hcCceecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence 999999999998766667999999999999999999999 7889999999999999999999999999865432211
Q ss_pred Ccccc-ccccCCCcccChhhhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccc
Q 042216 632 KTHVS-TQVKGSIGYLDPEYYRL--QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIID 708 (767)
Q Consensus 632 ~~~~~-~~~~gt~~y~aPE~~~~--~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 708 (767)
..... ....||++|||||++.. ..|+.|+||||||++..||.+|+.||......+...+ . .++......-
T Consensus 182 R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~------t-Lqn~pp~~~t 254 (516)
T KOG0582|consen 182 RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLL------T-LQNDPPTLLT 254 (516)
T ss_pred eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHH------H-hcCCCCCccc
Confidence 11122 45689999999999654 4799999999999999999999999977665432211 1 1122221111
Q ss_pred ccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 709 PFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 709 ~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
..+..+........+.+++..||+.||.+|||++++++
T Consensus 255 ~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 255 SGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred ccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 12222223345568999999999999999999999984
No 25
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-40 Score=352.87 Aligned_cols=249 Identities=25% Similarity=0.393 Sum_probs=211.7
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCC
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMA 555 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~ 555 (767)
.|.....||+|+.|.||.+.....++.||||++....+...+-+.+|+.+|+..+|+|||.++..+..++++|+|||||+
T Consensus 274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ 353 (550)
T KOG0578|consen 274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYME 353 (550)
T ss_pred hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecC
Confidence 56666789999999999999988889999999987766666678999999999999999999999988899999999999
Q ss_pred CCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccc
Q 042216 556 RGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHV 635 (767)
Q Consensus 556 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~ 635 (767)
+|+|.+.+... .+++.++..||.++++||+||| .++|+|||||.+|||++.++.+||+|||+|..+.... ..
T Consensus 354 ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~--~K 425 (550)
T KOG0578|consen 354 GGSLTDVVTKT---RMTEGQIAAICREILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ--SK 425 (550)
T ss_pred CCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeeeeeeecccccc--Cc
Confidence 99999998543 4899999999999999999999 8999999999999999999999999999998654422 23
Q ss_pred cccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCC
Q 042216 636 STQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNA 715 (767)
Q Consensus 636 ~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 715 (767)
....+||+.|||||++....|.+|.||||||++++||+-|++||.......-..++ ...|. ..-..
T Consensus 426 R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLI------a~ng~--------P~lk~ 491 (550)
T KOG0578|consen 426 RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI------ATNGT--------PKLKN 491 (550)
T ss_pred cccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHH------hhcCC--------CCcCC
Confidence 45678999999999999999999999999999999999999999653322111111 11111 11223
Q ss_pred ChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 716 PPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 716 ~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
+...+..+.+++.+||+.|+++||++.|+|+
T Consensus 492 ~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 492 PEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred ccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 4566788999999999999999999999995
No 26
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.3e-40 Score=345.19 Aligned_cols=266 Identities=21% Similarity=0.268 Sum_probs=211.6
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC--CcchhHHHHHHHHHhccccceeeeEeeeeecC--CceEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS--QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDD--GQMILV 550 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~--~~~~lV 550 (767)
+.|+.+++||+|.||.||+++...+++.||+|++.... .....-..+||.+|++|.||||++|.+...+. +.+|||
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 45777778999999999999999999999999997654 33344568999999999999999999998766 789999
Q ss_pred EecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCC
Q 042216 551 YDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNF 630 (767)
Q Consensus 551 ~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~ 630 (767)
+|||++ +|.-++... .-.+++.++..++.|++.||+|+| +++|+|||||.+|||||.+|.+||+|||||++....
T Consensus 197 FeYMdh-DL~GLl~~p-~vkft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 197 FEYMDH-DLSGLLSSP-GVKFTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPS 271 (560)
T ss_pred Eecccc-hhhhhhcCC-CcccChHHHHHHHHHHHHHHHHHh---hcCeeeccccccceEEcCCCCEEeccccceeeccCC
Confidence 999998 888888543 335899999999999999999999 899999999999999999999999999999976543
Q ss_pred CCccccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcc--ccc
Q 042216 631 SKTHVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIG--DII 707 (767)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~ 707 (767)
.....+..+-|..|.|||++.+ ..|+...|+||.||||.||++|++.|.+..+.++...+.-......+.... ++.
T Consensus 272 -~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP 350 (560)
T KOG0600|consen 272 -GSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLP 350 (560)
T ss_pred -CCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCC
Confidence 2333566778999999999876 489999999999999999999999998888777665543322211111111 111
Q ss_pred cccc-cC--CC-------ChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 708 DPFL-KG--NA-------PPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 708 d~~l-~~--~~-------~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.... +. .+ -...+...++|+..+|..||.+|.|+.+++.
T Consensus 351 ~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 351 HATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred cccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 1000 00 01 1123456789999999999999999999874
No 27
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=6.6e-39 Score=340.01 Aligned_cols=252 Identities=21% Similarity=0.316 Sum_probs=203.6
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcc---hhHHHHHHHHHhccccceeeeEeeeeec----CCceE
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQG---ALEFQTEIGMLSQLRYLHLVSLIGYCND----DGQMI 548 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~---~~~f~~Ei~~l~~l~Hpniv~l~g~~~~----~~~~~ 548 (767)
+......||+|++|.||+|.+. ++.||||+++...... .+.|.+|+.+|.+++||||++++|++.+ ....+
T Consensus 21 ~~~~~~~i~~g~~~~v~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~ 98 (283)
T PHA02988 21 DKYTSVLIKENDQNSIYKGIFN--NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLS 98 (283)
T ss_pred CCCCCeEEeeCCceEEEEEEEC--CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceE
Confidence 3444468999999999999985 4789999997653333 4568899999999999999999999876 35789
Q ss_pred EEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCC
Q 042216 549 LVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGP 628 (767)
Q Consensus 549 lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~ 628 (767)
+||||+++|+|.+++.+. ..++|...+.++.+++.||.|||+ ..+++||||||+|||+++++.+||+|||+++...
T Consensus 99 lv~Ey~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~--~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~ 174 (283)
T PHA02988 99 LILEYCTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYK--YTNKPYKNLTSVSFLVTENYKLKIICHGLEKILS 174 (283)
T ss_pred EEEEeCCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHh--cCCCCCCcCChhhEEECCCCcEEEcccchHhhhc
Confidence 999999999999999654 468999999999999999999994 2468899999999999999999999999987543
Q ss_pred CCCCccccccccCCCcccChhhhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccc
Q 042216 629 NFSKTHVSTQVKGSIGYLDPEYYRL--QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDI 706 (767)
Q Consensus 629 ~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 706 (767)
.. .....++..|+|||++.+ ..++.++|||||||++|||++|+.||......+ +.. .....+
T Consensus 175 ~~-----~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~---~~~---~i~~~~----- 238 (283)
T PHA02988 175 SP-----PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE---IYD---LIINKN----- 238 (283)
T ss_pred cc-----cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH---HHH---HHHhcC-----
Confidence 21 123457889999999976 689999999999999999999999996543221 111 111111
Q ss_pred ccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 042216 707 IDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQ 753 (767)
Q Consensus 707 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~ 753 (767)
.+...+..++..+.+++.+||+.||.+|||++||++.|+.+.+
T Consensus 239 ----~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 239 ----NSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred ----CCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 1112334567889999999999999999999999999987754
No 28
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=5.4e-40 Score=347.73 Aligned_cols=247 Identities=28% Similarity=0.449 Sum_probs=212.2
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEe
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~e 552 (767)
++|...+.||+|+||+||||+.+.+.+.||+|.+.+. .+++.+.+.+|++++++|+||||+.++++++...++++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 4677778899999999999999999999999998654 34456679999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK 632 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~ 632 (767)
|+.+ +|+.+|.. ...|+++++..|+.+++.||.||| +++|+|||+||+|||++.++.+|+||||+|+.... .
T Consensus 82 ~a~g-~L~~il~~--d~~lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~--~ 153 (808)
T KOG0597|consen 82 YAVG-DLFTILEQ--DGKLPEEQVRAIAYDLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMST--N 153 (808)
T ss_pred hhhh-hHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHH---hcCcccccCCcceeeecCCCceeechhhhhhhccc--C
Confidence 9987 99999954 446999999999999999999999 88999999999999999999999999999996543 4
Q ss_pred ccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccccccc
Q 042216 633 THVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLK 712 (767)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 712 (767)
..+.+.++||+-|||||.+.++.|+..+|+||+||+|||+++|++||.... +...+.....+ +
T Consensus 154 t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s------i~~Lv~~I~~d--------~--- 216 (808)
T KOG0597|consen 154 TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS------ITQLVKSILKD--------P--- 216 (808)
T ss_pred ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH------HHHHHHHHhcC--------C---
Confidence 556678899999999999999999999999999999999999999995431 11111221111 1
Q ss_pred CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 713 GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 713 ~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
-..|...+..+..++...+.+||.+|.+..+++.
T Consensus 217 v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 217 VKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred CCCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 1134567788999999999999999999999983
No 29
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.2e-39 Score=339.18 Aligned_cols=251 Identities=35% Similarity=0.574 Sum_probs=199.8
Q ss_pred cceeeeccCcEEEEEEEec----CCCceEEEEEeCCCCC-cchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 479 NLLIIGRGGFGNVYKGFLN----GDSTPVAIKRLNPGSQ-QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 479 ~~~~LG~G~fG~Vy~g~~~----~~~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
..+.||.|.||.||+|.+. ..+..|+||.++.... ...++|.+|++.+++++||||++++|+|...+..++|+||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 3468999999999999998 3347899999976433 3467899999999999999999999999988889999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+++|+|.++|.......+++.+++.|+.|+++||.||| +.+++|+||+++|||+++++.+||+|||+++........
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~ 159 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY 159 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred cccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccccc
Confidence 99999999998875667999999999999999999999 678999999999999999999999999999865322222
Q ss_pred cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCcccccccccc
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLK 712 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 712 (767)
...........|+|||.+....++.++||||||+++|||++ |+.|+...... .+.. .. .++. +
T Consensus 160 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~---~~~~---~~-~~~~---------~ 223 (259)
T PF07714_consen 160 KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNE---EIIE---KL-KQGQ---------R 223 (259)
T ss_dssp EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHH---HHHH---HH-HTTE---------E
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccc---cc-cccc---------c
Confidence 33334557789999999999999999999999999999999 78888554221 1111 11 2211 1
Q ss_pred CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 042216 713 GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGL 748 (767)
Q Consensus 713 ~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L 748 (767)
...+..++..+.+++.+||+.+|++||++.++++.|
T Consensus 224 ~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 224 LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 223445678899999999999999999999999887
No 30
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=3.2e-39 Score=356.14 Aligned_cols=259 Identities=25% Similarity=0.412 Sum_probs=205.5
Q ss_pred hccccceeeeccCcEEEEEEEe-----cCCCceEEEEEeCCCC-CcchhHHHHHHHHHhcc-ccceeeeEeeeeecCCce
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFL-----NGDSTPVAIKRLNPGS-QQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDGQM 547 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~-----~~~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~ 547 (767)
++|+..+.||+|+||.||+|+. .+.+..||||+++... ....+.+.+|+.+|..+ +||||++++++|.+.+..
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~ 114 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPT 114 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcc
Confidence 4677788999999999999974 2345689999997543 33445688999999999 899999999999999999
Q ss_pred EEEEecCCCCChhhhhccCC------------------------------------------------------------
Q 042216 548 ILVYDYMARGTLRDHLYNND------------------------------------------------------------ 567 (767)
Q Consensus 548 ~lV~ey~~~gsL~~~L~~~~------------------------------------------------------------ 567 (767)
++||||+++|+|.++++...
T Consensus 115 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (375)
T cd05104 115 LVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSY 194 (375)
T ss_pred eeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccccee
Confidence 99999999999999985421
Q ss_pred -------------CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 568 -------------NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 568 -------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
...++|..+++++.|++.||.||| +++|+||||||+|||+++++.+||+|||+++.........
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 271 (375)
T cd05104 195 IDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYV 271 (375)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccceeccCccccc
Confidence 125789999999999999999999 7889999999999999999999999999997543322211
Q ss_pred ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccC
Q 042216 635 VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKG 713 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 713 (767)
......++..|+|||.+.+..++.++|||||||++|||++ |..||....... ....+ ...+ .+.
T Consensus 272 ~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~--~~~~~----~~~~---------~~~ 336 (375)
T cd05104 272 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS--KFYKM----IKEG---------YRM 336 (375)
T ss_pred ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH--HHHHH----HHhC---------ccC
Confidence 2223345678999999999999999999999999999998 888886543221 11111 1111 111
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 042216 714 NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFV 751 (767)
Q Consensus 714 ~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~ 751 (767)
..+...+.++.+++.+||+.||++||++.||+++|++.
T Consensus 337 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 337 LSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 12233456789999999999999999999999999864
No 31
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-39 Score=342.32 Aligned_cols=253 Identities=25% Similarity=0.317 Sum_probs=211.9
Q ss_pred HhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhcc-ccceeeeEeeeeecCCceE
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDGQMI 548 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~ 548 (767)
..++|...+.||+|+|++|++|+.+..++.+|||++.+. .+...+-...|-+.|.+| .||.|++|+..+.++..+|
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY 150 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY 150 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence 345788888999999999999999999999999998654 223334467788889999 8999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCC
Q 042216 549 LVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGP 628 (767)
Q Consensus 549 lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~ 628 (767)
+|+||+++|+|.++|++- ..+++.....++.+|+.||+||| +++||||||||+|||||++|++||+|||-|+...
T Consensus 151 FvLe~A~nGdll~~i~K~--Gsfde~caR~YAAeIldAleylH---~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~ 225 (604)
T KOG0592|consen 151 FVLEYAPNGDLLDLIKKY--GSFDETCARFYAAEILDALEYLH---SNGIIHRDLKPENILLDKDGHIKITDFGSAKILS 225 (604)
T ss_pred EEEEecCCCcHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeEcCCCcEEEeeccccccCC
Confidence 999999999999999665 45899999999999999999999 8999999999999999999999999999998764
Q ss_pred CCCCc---------ccc--ccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHH
Q 042216 629 NFSKT---------HVS--TQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATEC 697 (767)
Q Consensus 629 ~~~~~---------~~~--~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~ 697 (767)
..... ... ...+||..|.+||++..+..++.+|+|+|||+||+|+.|++||.+..+- ++- +
T Consensus 226 ~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney----liF---q- 297 (604)
T KOG0592|consen 226 PSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY----LIF---Q- 297 (604)
T ss_pred hhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH----HHH---H-
Confidence 33221 111 3478999999999999999999999999999999999999999765442 110 0
Q ss_pred hhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 698 YRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 698 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
++++ +.-.+++..++.+.+|+.+.|..||.+|+|.++|-+.
T Consensus 298 -------kI~~--l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 298 -------KIQA--LDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred -------HHHH--hcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 0110 2334566777889999999999999999999888754
No 32
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.3e-38 Score=341.30 Aligned_cols=263 Identities=27% Similarity=0.414 Sum_probs=205.7
Q ss_pred hccccceeeeccCcEEEEEEEecC----------------CCceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNG----------------DSTPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSL 537 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~----------------~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l 537 (767)
++|...+.||+|+||.||++.+.+ .+..||+|.+.... .....+|.+|++++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 467778899999999999998643 23479999987653 2334579999999999999999999
Q ss_pred eeeeecCCceEEEEecCCCCChhhhhccCC-----------------CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEe
Q 042216 538 IGYCNDDGQMILVYDYMARGTLRDHLYNND-----------------NPPLPWDRRLKICIGAARALHYLHTGASKVIIH 600 (767)
Q Consensus 538 ~g~~~~~~~~~lV~ey~~~gsL~~~L~~~~-----------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH 600 (767)
++++.+.+..++||||+++|+|.+++.... ...++|.++++++.|++.||.||| +.+|+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS---SLNFVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH---HCCccc
Confidence 999999999999999999999999885421 134788999999999999999999 778999
Q ss_pred cCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh--CCCC
Q 042216 601 RDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC--ARPP 678 (767)
Q Consensus 601 ~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt--g~~P 678 (767)
|||||+|||+++++.+||+|||+++...............++..|+|||++..+.++.++|||||||++|||++ +..|
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 99999999999999999999999875433222222233456789999999998899999999999999999986 5667
Q ss_pred CCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 042216 679 ILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLE 749 (767)
Q Consensus 679 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~ 749 (767)
|...... .....+......... ......++.++..+.+++.+||+.||.+|||+.+|.+.|+
T Consensus 242 ~~~~~~~---~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 242 YGELTDE---QVIENAGEFFRDQGR------QVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCcCCHH---HHHHHHHHHhhhccc------cccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 7544322 222222222211110 0111224456778999999999999999999999998886
No 33
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=4.9e-39 Score=354.44 Aligned_cols=260 Identities=26% Similarity=0.409 Sum_probs=206.0
Q ss_pred hccccceeeeccCcEEEEEEEecC-----CCceEEEEEeCCCC-CcchhHHHHHHHHHhcc-ccceeeeEeeeeecCCce
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNG-----DSTPVAIKRLNPGS-QQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDGQM 547 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~ 547 (767)
++|+..+.||+|+||.||+|+... ....||||+++... ......+.+|+++++.+ +|+||++++++|...+..
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~ 117 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPV 117 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCe
Confidence 468888899999999999998532 23579999997543 23345688999999999 899999999999999999
Q ss_pred EEEEecCCCCChhhhhccCC------------------------------------------------------------
Q 042216 548 ILVYDYMARGTLRDHLYNND------------------------------------------------------------ 567 (767)
Q Consensus 548 ~lV~ey~~~gsL~~~L~~~~------------------------------------------------------------ 567 (767)
++||||+++|+|.++++...
T Consensus 118 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (374)
T cd05106 118 LVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDS 197 (374)
T ss_pred EEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccc
Confidence 99999999999999885421
Q ss_pred --------CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccccc
Q 042216 568 --------NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQV 639 (767)
Q Consensus 568 --------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~ 639 (767)
..++++.++++++.|++.||.||| +++|+||||||+|||+++++.+||+|||+++..............
T Consensus 198 ~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~ 274 (374)
T cd05106 198 KDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNA 274 (374)
T ss_pred cchhccCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCC
Confidence 124788999999999999999999 788999999999999999999999999998754332211122233
Q ss_pred cCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChh
Q 042216 640 KGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPV 718 (767)
Q Consensus 640 ~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 718 (767)
.++..|||||++....++.++|||||||++|||++ |+.||....... .... ....+ .....+..
T Consensus 275 ~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~--~~~~----~~~~~---------~~~~~~~~ 339 (374)
T cd05106 275 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS--KFYK----MVKRG---------YQMSRPDF 339 (374)
T ss_pred CCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH--HHHH----HHHcc---------cCccCCCC
Confidence 45678999999998899999999999999999997 999996543221 1111 11111 11112223
Q ss_pred hHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 042216 719 CLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVF 752 (767)
Q Consensus 719 ~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~ 752 (767)
.+.++.+++.+||+.||.+||++.+|+++|++++
T Consensus 340 ~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 340 APPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 4577899999999999999999999999999875
No 34
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.9e-38 Score=333.24 Aligned_cols=256 Identities=25% Similarity=0.405 Sum_probs=207.0
Q ss_pred hccccceeeeccCcEEEEEEEec---CCCceEEEEEeCCCCC-cchhHHHHHHHHHhccccceeeeEeeeeecCCceEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLN---GDSTPVAIKRLNPGSQ-QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILV 550 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~---~~~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV 550 (767)
++|+..++||+|+||.||+|+++ ..+..||+|.++.... .....|.+|+.++.+++||||+++++++..++..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 56788889999999999999875 3346899999876532 3345689999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCC
Q 042216 551 YDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNF 630 (767)
Q Consensus 551 ~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~ 630 (767)
|||+++|+|.+++.... ..+++.+++.++.|++.||+||| +.+++||||||+|||++.++.+|++|||.+......
T Consensus 85 ~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~ 160 (266)
T cd05064 85 TEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSE 160 (266)
T ss_pred EEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCccccccccc
Confidence 99999999999997543 36899999999999999999999 788999999999999999999999999987643211
Q ss_pred CCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccccc
Q 042216 631 SKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDP 709 (767)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 709 (767)
.........++..|+|||.+.+..++.++|||||||++||+++ |+.||......+ .... ...+
T Consensus 161 -~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~---~~~~----~~~~-------- 224 (266)
T cd05064 161 -AIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD---VIKA----VEDG-------- 224 (266)
T ss_pred -chhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH---HHHH----HHCC--------
Confidence 1111112335678999999999999999999999999999875 999996543321 1111 1111
Q ss_pred cccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 042216 710 FLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFV 751 (767)
Q Consensus 710 ~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~ 751 (767)
.....+..++..+.+++.+||+.+|.+||++.+|++.|+++
T Consensus 225 -~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 225 -FRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred -CCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 11123455677899999999999999999999999998765
No 35
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.1e-38 Score=338.03 Aligned_cols=257 Identities=30% Similarity=0.485 Sum_probs=209.6
Q ss_pred hccccceeeeccCcEEEEEEEecCCC-----ceEEEEEeCCCCC-cchhHHHHHHHHHhccccceeeeEeeeeecCCceE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDS-----TPVAIKRLNPGSQ-QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMI 548 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~-----~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~ 548 (767)
++|+..+.||+|+||.||+|.....+ ..||+|.+..... ....+|.+|++++.+++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 46778889999999999999876544 5799999875432 33456899999999999999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCC--------------CCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCC
Q 042216 549 LVYDYMARGTLRDHLYNNDN--------------PPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEW 614 (767)
Q Consensus 549 lV~ey~~~gsL~~~L~~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~ 614 (767)
++|||+++|+|.+++..... ..+++.+++.++.|++.||.||| ..+++|+||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccccceEEEcCCC
Confidence 99999999999999965321 45889999999999999999999 78899999999999999999
Q ss_pred cEEEeecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHH
Q 042216 615 VAKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVW 693 (767)
Q Consensus 615 ~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~ 693 (767)
.+||+|||+++...............++..|+|||.+....++.++|||||||++|||++ |..||......+ +..
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~---~~~- 237 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE---VIE- 237 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH---HHH-
Confidence 999999999875433222222334456788999999998899999999999999999998 999986543321 111
Q ss_pred HHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 042216 694 ATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEF 750 (767)
Q Consensus 694 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~ 750 (767)
.+..+. ....+..++.++.+++.+||+.||.+||+++||++.|++
T Consensus 238 ---~i~~~~---------~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 238 ---MIRSRQ---------LLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred ---HHHcCC---------cCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 111211 112345677889999999999999999999999999975
No 36
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.1e-38 Score=311.03 Aligned_cols=265 Identities=22% Similarity=0.300 Sum_probs=210.9
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcc--hhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQG--ALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~--~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
+|..++.||+|.||.||+|+...+++.||||+++.....+ .....+||+.|+.++|+||+.|++++-..+.+.||+||
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf 82 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF 82 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence 5667778999999999999999999999999997653322 34578999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
|+. +|...++.+. ..|+-.++..++.++.+|++||| .+.|+||||||.|+|++.+|.+||+|||+++.......
T Consensus 83 m~t-dLe~vIkd~~-i~l~pa~iK~y~~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~- 156 (318)
T KOG0659|consen 83 MPT-DLEVVIKDKN-IILSPADIKSYMLMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR- 156 (318)
T ss_pred ccc-cHHHHhcccc-cccCHHHHHHHHHHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEeecccchhccCCCCc-
Confidence 987 9998887554 46899999999999999999999 78899999999999999999999999999998654332
Q ss_pred cccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcc---ccccc
Q 042216 634 HVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIG---DIIDP 709 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~d~ 709 (767)
..+..+-|..|.|||.+.+ +.|+...||||.||++.||+.|.+-|.+..+-++...+-.+.......... .+.|-
T Consensus 157 -~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY 235 (318)
T KOG0659|consen 157 -IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDY 235 (318)
T ss_pred -ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccH
Confidence 2334467889999998875 579999999999999999999988887666554443332221111111111 11111
Q ss_pred c--------ccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 710 F--------LKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 710 ~--------l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
. .....-+.+..+.++++..++..||.+|+|++|++++
T Consensus 236 ~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 236 VKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred HHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 0 0111234466778999999999999999999999865
No 37
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.4e-38 Score=336.16 Aligned_cols=251 Identities=22% Similarity=0.324 Sum_probs=205.0
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
|+..+.||+|+||.||++....+++.||+|.+.... ......+.+|++++.+++|+|++++++++.+.+..++|+||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 667789999999999999998888999999986432 22334578999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+++|+|.+++.......+++.++..++.|++.||.||| +.+|+||||||+|||+++++.+||+|||++......
T Consensus 82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--- 155 (285)
T cd05631 82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG--- 155 (285)
T ss_pred cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC---
Confidence 99999998886555556899999999999999999999 788999999999999999999999999998764321
Q ss_pred cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccC
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKG 713 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 713 (767)
.......|+..|+|||++.+..++.++|||||||++|||++|+.||.......... . ........ ..
T Consensus 156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~--~-~~~~~~~~----------~~ 222 (285)
T cd05631 156 ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKRE--E-VDRRVKED----------QE 222 (285)
T ss_pred CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHH--H-HHHHhhcc----------cc
Confidence 11234568999999999999999999999999999999999999997544321111 0 11111110 11
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 042216 714 NAPPVCLNQFVEVAMSCVNDDRIRRPS-----MSDVVW 746 (767)
Q Consensus 714 ~~~~~~~~~l~~li~~Cl~~dp~~RPs-----~~evl~ 746 (767)
..+...+.++.+|+.+||+.||.+||+ ++++++
T Consensus 223 ~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 223 EYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred cCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 223345678899999999999999997 788885
No 38
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-38 Score=330.06 Aligned_cols=269 Identities=25% Similarity=0.354 Sum_probs=203.1
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHh--ccccceeeeEeeeeecCC----ceEE
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLS--QLRYLHLVSLIGYCNDDG----QMIL 549 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~--~l~Hpniv~l~g~~~~~~----~~~l 549 (767)
..+..++||+|+||.||||++.+ +.||||++. .++.+.|++|-++.+ .++|+||++++++-+... +++|
T Consensus 211 pl~l~eli~~Grfg~V~KaqL~~--~~VAVKifp---~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL 285 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQLDN--RLVAVKIFP---EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL 285 (534)
T ss_pred chhhHHHhhcCccceeehhhccC--ceeEEEecC---HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence 34445579999999999999976 799999996 455667888877766 468999999999987665 8999
Q ss_pred EEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhC------CCCCeEecCCCCCCeEECCCCcEEEeecCC
Q 042216 550 VYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTG------ASKVIIHRDVKTTNILLDEEWVAKVSDFGL 623 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------~~~~iiH~Dlk~~NILld~~~~~ki~DfGl 623 (767)
|+||.+.|||.+||..+ .++|....+|+..+++||+|||++ .+++|+|||||++||||..|+++.|+||||
T Consensus 286 Vt~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL 362 (534)
T KOG3653|consen 286 VTEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL 362 (534)
T ss_pred EeeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence 99999999999999765 489999999999999999999974 356799999999999999999999999999
Q ss_pred cccCCCCCCccccccccCCCcccChhhhccCC-CC-----chhhHHHHHHHHHHHHhCCCCCCC--CCC---------cc
Q 042216 624 CKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQL-LT-----EKSDVYSFGVVLLEVLCARPPILR--TGD---------KK 686 (767)
Q Consensus 624 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s-----~ksDV~SfGvvl~elltg~~P~~~--~~~---------~~ 686 (767)
|...............+||.+|||||++.+.. +. .+.||||+|.|||||++...-+.. ..+ +.
T Consensus 363 Al~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~ 442 (534)
T KOG3653|consen 363 ALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN 442 (534)
T ss_pred eEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC
Confidence 98765433333334478999999999997642 22 468999999999999986544321 110 00
Q ss_pred chhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhhh
Q 042216 687 QVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQLLR 756 (767)
Q Consensus 687 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~~~ 756 (767)
.-.+.+.-.-.+++..-..+.|..... ..+..+++.+..||+.||+.|.|+.=|-+++.++....+
T Consensus 443 hPt~e~mq~~VV~kK~RP~~p~~W~~h----~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 443 HPTLEEMQELVVRKKQRPKIPDAWRKH----AGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred CCCHHHHHHHHHhhccCCCChhhhhcC----ccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 111222111112222222222221111 345678999999999999999999999999988876664
No 39
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=4.7e-38 Score=329.60 Aligned_cols=256 Identities=26% Similarity=0.405 Sum_probs=210.8
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
.+|...+.||+|+||.||+|..++.++.||+|.+... .....++.+|++++++++|+||++++++|..++..+++|||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 4577788999999999999999887889999998744 334567899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
++++|.+++.......+++..++.++.|+++||+||| +.+++||||||+|||+++++.+||+|||+++....... .
T Consensus 85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~-~ 160 (263)
T cd05052 85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-T 160 (263)
T ss_pred CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCCcccccccccee-e
Confidence 9999999997665567899999999999999999999 78899999999999999999999999999876432211 1
Q ss_pred ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccC
Q 042216 635 VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKG 713 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 713 (767)
......++..|+|||.+.+..++.++|||||||++|||++ |..|+......+ +. ..... ....
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~---~~----~~~~~---------~~~~ 224 (263)
T cd05052 161 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VY----ELLEK---------GYRM 224 (263)
T ss_pred ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HH----HHHHC---------CCCC
Confidence 1112234568999999999999999999999999999998 899985432211 11 11111 1122
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 042216 714 NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFV 751 (767)
Q Consensus 714 ~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~ 751 (767)
..+..++.++.+++.+||+.+|++||++.+++++|+.+
T Consensus 225 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 225 ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 33445677899999999999999999999999999875
No 40
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2e-38 Score=313.47 Aligned_cols=237 Identities=26% Similarity=0.335 Sum_probs=203.2
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC---cchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ---QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
.+|+.+..||.|+||+|.+++.+.++.-+|+|++..... ...+...+|..+|+.+.||.++++.+.|.+.+.++|||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 468888899999999999999999899999999976532 23344678999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
||+++|.|..+|++.. ++++....-++.+|+.||+||| +..|++|||||+|||||.+|.+||+|||+|+....
T Consensus 124 eyv~GGElFS~Lrk~~--rF~e~~arFYAAeivlAleylH---~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~-- 196 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSG--RFSEPHARFYAAEIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG-- 196 (355)
T ss_pred eccCCccHHHHHHhcC--CCCchhHHHHHHHHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEEEeccceEEecC--
Confidence 9999999999997654 5899999999999999999999 88899999999999999999999999999986432
Q ss_pred CccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccc
Q 042216 632 KTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFL 711 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 711 (767)
.+-..+||+.|+|||.+..+.+...+|.|||||++|||+.|.+||...... -..+.+.+++
T Consensus 197 ---rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~-------~iY~KI~~~~--------- 257 (355)
T KOG0616|consen 197 ---RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPI-------QIYEKILEGK--------- 257 (355)
T ss_pred ---cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChH-------HHHHHHHhCc---------
Confidence 355689999999999999999999999999999999999999999765441 1112222221
Q ss_pred cCCCChhhHHHHHHHHHHccccCCCCC
Q 042216 712 KGNAPPVCLNQFVEVAMSCVNDDRIRR 738 (767)
Q Consensus 712 ~~~~~~~~~~~l~~li~~Cl~~dp~~R 738 (767)
-..|.-...++.+|+...++.|-.+|
T Consensus 258 -v~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 258 -VKFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred -ccCCcccCHHHHHHHHHHHhhhhHhh
Confidence 12456667788899999999999988
No 41
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-39 Score=338.76 Aligned_cols=265 Identities=20% Similarity=0.257 Sum_probs=210.5
Q ss_pred HhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhH--HHHHHHHHhccc-cceeeeEeeeeecCC-ceE
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALE--FQTEIGMLSQLR-YLHLVSLIGYCNDDG-QMI 548 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~--f~~Ei~~l~~l~-Hpniv~l~g~~~~~~-~~~ 548 (767)
..++|...+.||.|.||.||+|+....+..||||+++..... .++ -.+|++.|++|. ||||++|...+.+.+ .++
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~ 86 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY 86 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence 345677888999999999999999988899999999765332 223 478999999998 999999999998888 999
Q ss_pred EEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCC
Q 042216 549 LVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGP 628 (767)
Q Consensus 549 lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~ 628 (767)
+|||||+. +|.++++.. +..+++..+..|+.||++||+|+| .+|+.|||+||+|||+..+..+||+||||||...
T Consensus 87 fVfE~Md~-NLYqLmK~R-~r~fse~~irnim~QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 87 FVFEFMDC-NLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred eeHHhhhh-hHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHH---hcCcccccCChhheEecccceeEecccccccccc
Confidence 99999987 999999776 678999999999999999999999 8899999999999999988999999999999653
Q ss_pred CCCCccccccccCCCcccChhhh-ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCC-----
Q 042216 629 NFSKTHVSTQVKGSIGYLDPEYY-RLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGK----- 702 (767)
Q Consensus 629 ~~~~~~~~~~~~gt~~y~aPE~~-~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~----- 702 (767)
. ....+..+.|..|.|||++ +.+-|+.+.|+||+|||++|+.+-++-|-+..+.++..-+--+.....+..
T Consensus 162 S---kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~ 238 (538)
T KOG0661|consen 162 S---KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGY 238 (538)
T ss_pred c---CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHH
Confidence 2 2334566788899999986 567899999999999999999999999977665443322111110000000
Q ss_pred ---------ccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 703 ---------IGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 703 ---------~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
.....-..+.. .-+.++.++.+++.+|+..||.+|||++|.++.
T Consensus 239 ~La~~mnf~~P~~~~~~l~~-L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 239 NLASAMNFRFPQVKPSPLKD-LLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHHHhccCCCcCCCCChHH-hCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 00000001111 112377889999999999999999999999865
No 42
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=5.8e-38 Score=338.28 Aligned_cols=260 Identities=24% Similarity=0.427 Sum_probs=208.3
Q ss_pred hccccceeeeccCcEEEEEEEecCCCc----eEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDST----PVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMIL 549 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~----~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~l 549 (767)
.+|+..+.||+|+||.||+|++..++. .||+|.++... ....+++.+|+.+++.++||||++++|+|... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 468889999999999999998754443 48999987543 34456789999999999999999999999765 5789
Q ss_pred EEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCC
Q 042216 550 VYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPN 629 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~ 629 (767)
++||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+|||+++++.+||+|||+++....
T Consensus 86 v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 86 ITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred eeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEecCCCcEEEccccccccccC
Confidence 999999999999997543 35889999999999999999999 78899999999999999999999999999986543
Q ss_pred CCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCcccccc
Q 042216 630 FSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIID 708 (767)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 708 (767)
...........++..|+|||++....++.++|||||||++|||++ |+.||......+ +.. ....+
T Consensus 162 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~---~~~----~~~~~------- 227 (316)
T cd05108 162 DEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISS----ILEKG------- 227 (316)
T ss_pred CCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH---HHH----HHhCC-------
Confidence 222222222335678999999999999999999999999999997 999986433211 111 11111
Q ss_pred ccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhh
Q 042216 709 PFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQLL 755 (767)
Q Consensus 709 ~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~~ 755 (767)
.....+..+..++.+++.+||+.+|.+||++.+++..|..+....
T Consensus 228 --~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 228 --ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred --CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 111223446678899999999999999999999999998876543
No 43
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-39 Score=340.86 Aligned_cols=258 Identities=27% Similarity=0.447 Sum_probs=219.7
Q ss_pred ccccceeeeccCcEEEEEEEecC----CCceEEEEEeCCC-CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEE
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNG----DSTPVAIKRLNPG-SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILV 550 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~----~~~~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV 550 (767)
.....++||+|-||.||+|.... ....||||.-+.+ .....+.|+.|..++++++||||++|+|.|.+. ..|+|
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~Wiv 468 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIV 468 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEE
Confidence 34445579999999999998743 3346999988765 344567799999999999999999999999765 78999
Q ss_pred EecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCC
Q 042216 551 YDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNF 630 (767)
Q Consensus 551 ~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~ 630 (767)
||.++.|.|.+||..+. ..|+......+|.|++.+|.||| +...|||||..+|||+...-.+||+||||+|.....
T Consensus 469 mEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~ 544 (974)
T KOG4257|consen 469 MELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDD 544 (974)
T ss_pred EecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecccchhhhcccc
Confidence 99999999999997664 35899999999999999999999 888999999999999999999999999999987654
Q ss_pred CCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccccc
Q 042216 631 SKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDP 709 (767)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 709 (767)
..-.. +...-++.|||||.+...+++.+||||.|||++||++. |..||.+....+ +...++.
T Consensus 545 ~yYka-S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD----------------VI~~iEn 607 (974)
T KOG4257|consen 545 AYYKA-SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD----------------VIGHIEN 607 (974)
T ss_pred chhhc-cccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc----------------eEEEecC
Confidence 44333 35567789999999999999999999999999999986 999997765432 2223334
Q ss_pred cccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhh
Q 042216 710 FLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQLL 755 (767)
Q Consensus 710 ~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~~ 755 (767)
.-+-+.|+.|+..|+.|+.+||..+|.+||.+.++...|+.++++-
T Consensus 608 GeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qee 653 (974)
T KOG4257|consen 608 GERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQEE 653 (974)
T ss_pred CCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHHh
Confidence 4456789999999999999999999999999999999999998844
No 44
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-38 Score=339.91 Aligned_cols=249 Identities=27% Similarity=0.360 Sum_probs=207.9
Q ss_pred HhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC----CC-cchhHHHHHHHHHhccc-cceeeeEeeeeecCCc
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG----SQ-QGALEFQTEIGMLSQLR-YLHLVSLIGYCNDDGQ 546 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~----~~-~~~~~f~~Ei~~l~~l~-Hpniv~l~g~~~~~~~ 546 (767)
....|...+.||+|+||+|++|.+...+..||+|.+... .. ...+.+.+|+.+++.++ ||||++++.++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 456788888999999999999999888899999977553 11 22345678999999998 9999999999999999
Q ss_pred eEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCC-CcEEEeecCCcc
Q 042216 547 MILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEE-WVAKVSDFGLCK 625 (767)
Q Consensus 547 ~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~-~~~ki~DfGla~ 625 (767)
.++||||+.+|+|.+++.+ ..++.+.....++.|++.|++||| +++|+||||||+|||+|.+ +++||+|||++.
T Consensus 95 ~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H---~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~ 169 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCH---SRGIVHRDLKPENILLDGNEGNLKLSDFGLSA 169 (370)
T ss_pred EEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEecCCCCCEEEecccccc
Confidence 9999999999999999976 456899999999999999999999 8899999999999999999 999999999998
Q ss_pred cCCCCCCccccccccCCCcccChhhhccCC-CC-chhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCc
Q 042216 626 FGPNFSKTHVSTQVKGSIGYLDPEYYRLQL-LT-EKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKI 703 (767)
Q Consensus 626 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s-~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~ 703 (767)
... .........+||+.|+|||++.+.. |+ .++||||+||+||-|++|+.||..... ..+.. .+..+.
T Consensus 170 ~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~---~~l~~----ki~~~~- 239 (370)
T KOG0583|consen 170 ISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNV---PNLYR----KIRKGE- 239 (370)
T ss_pred ccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccH---HHHHH----HHhcCC-
Confidence 753 2233456778999999999999877 76 789999999999999999999965221 11111 111111
Q ss_pred cccccccccCCCChhh-HHHHHHHHHHccccCCCCCCCHHHHH
Q 042216 704 GDIIDPFLKGNAPPVC-LNQFVEVAMSCVNDDRIRRPSMSDVV 745 (767)
Q Consensus 704 ~~~~d~~l~~~~~~~~-~~~l~~li~~Cl~~dp~~RPs~~evl 745 (767)
-.+|... +.++..++.+|+..||.+|+++.+|+
T Consensus 240 ---------~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 240 ---------FKIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred ---------ccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 1234444 78899999999999999999999998
No 45
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=4.7e-38 Score=328.84 Aligned_cols=257 Identities=27% Similarity=0.437 Sum_probs=214.5
Q ss_pred HhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEe
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~e 552 (767)
...+|...+.||+|+||.||+|...+ +..+++|.+.........++.+|+.+++.++|+||+++++++...+..++|||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence 45678888899999999999999987 68899999987665566789999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK 632 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~ 632 (767)
|+++|+|.+++.......+++.++..++.|++.||.||| +++++|+||||+|||+++++.+||+|||++.......
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~- 158 (261)
T cd05148 83 LMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV- 158 (261)
T ss_pred ecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccccchhhcCCcc-
Confidence 999999999998766667999999999999999999999 7789999999999999999999999999987543211
Q ss_pred ccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccccccc
Q 042216 633 THVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFL 711 (767)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 711 (767)
.......++..|+|||.+....++.++||||||++++||++ |+.||......+ ...... . ..
T Consensus 159 -~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~---~~~~~~----~---------~~ 221 (261)
T cd05148 159 -YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE---VYDQIT----A---------GY 221 (261)
T ss_pred -ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH---HHHHHH----h---------CC
Confidence 11223346778999999998899999999999999999998 899985543221 111111 1 11
Q ss_pred cCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 042216 712 KGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFV 751 (767)
Q Consensus 712 ~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~ 751 (767)
+...+..++..+.+++.+||+.||.+|||+.++++.|+.+
T Consensus 222 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 222 RMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 1223455677899999999999999999999999999863
No 46
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.4e-37 Score=326.49 Aligned_cols=258 Identities=29% Similarity=0.466 Sum_probs=209.4
Q ss_pred hhccccceeeeccCcEEEEEEEecCC---CceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEE
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGD---STPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMIL 549 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~---~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~l 549 (767)
.++|...+.||+|+||.||+|.+... ...||||.+.... .....+|.+|+.++++++||||+++++++...+..++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 35688889999999999999998643 3579999987543 3334578999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCC
Q 042216 550 VYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPN 629 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~ 629 (767)
+|||+++|+|.+++.... ..+++.+++.++.|++.||.||| +.+|+|+||||+|||+++++.+||+|||+++....
T Consensus 83 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 83 ITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLED 158 (266)
T ss_pred EEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence 999999999999996644 36899999999999999999999 78899999999999999999999999999986542
Q ss_pred CCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCcccccc
Q 042216 630 FSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIID 708 (767)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 708 (767)
...........++..|+|||.+.+..++.++||||||+++|||++ |..||...... .+.... ..+.
T Consensus 159 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~---~~~~~~----~~~~------ 225 (266)
T cd05033 159 SEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ---DVIKAV----EDGY------ 225 (266)
T ss_pred cccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH---HHHHHH----HcCC------
Confidence 222222223345678999999998999999999999999999998 99998544322 111111 1111
Q ss_pred ccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 042216 709 PFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFV 751 (767)
Q Consensus 709 ~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~ 751 (767)
....+..++..+.+++.+||+.+|++||++.+|++.|+++
T Consensus 226 ---~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 226 ---RLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ---CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1112334567899999999999999999999999999876
No 47
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=7.4e-38 Score=346.79 Aligned_cols=262 Identities=25% Similarity=0.382 Sum_probs=207.7
Q ss_pred hhccccceeeeccCcEEEEEEEecCC-----CceEEEEEeCCCCC-cchhHHHHHHHHHhccc-cceeeeEeeeeecCCc
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGD-----STPVAIKRLNPGSQ-QGALEFQTEIGMLSQLR-YLHLVSLIGYCNDDGQ 546 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~-----~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~-Hpniv~l~g~~~~~~~ 546 (767)
.++|...++||+|+||.||+|+.... ...||||++..... ...+.+.+|+++|+++. ||||++++++|.+.+.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 45677888999999999999986432 24699999975433 33457899999999996 9999999999999999
Q ss_pred eEEEEecCCCCChhhhhccCC-----------------------------------------------------------
Q 042216 547 MILVYDYMARGTLRDHLYNND----------------------------------------------------------- 567 (767)
Q Consensus 547 ~~lV~ey~~~gsL~~~L~~~~----------------------------------------------------------- 567 (767)
.+||||||++|+|.++|++..
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 999999999999999885421
Q ss_pred -----------------------------------CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECC
Q 042216 568 -----------------------------------NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDE 612 (767)
Q Consensus 568 -----------------------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~ 612 (767)
...+++.+++.++.|+++||.||| ..+|+||||||+|||+++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA---SKNCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHhEEEeC
Confidence 124788999999999999999999 788999999999999999
Q ss_pred CCcEEEeecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHH
Q 042216 613 EWVAKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLA 691 (767)
Q Consensus 613 ~~~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~ 691 (767)
++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||........ +
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~--~- 349 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST--F- 349 (400)
T ss_pred CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH--H-
Confidence 99999999999875432222112223346788999999998899999999999999999997 9999854322111 1
Q ss_pred HHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 042216 692 VWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQ 753 (767)
Q Consensus 692 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~ 753 (767)
......+ .+...+..++.++.+++.+||+.+|++||++.+|+++|+.+++
T Consensus 350 ---~~~~~~~---------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 350 ---YNKIKSG---------YRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred ---HHHHhcC---------CCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 1111111 1112234566789999999999999999999999999998753
No 48
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-39 Score=334.05 Aligned_cols=248 Identities=27% Similarity=0.380 Sum_probs=209.0
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC-CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG-SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
.|...+.||+|.||.||||.....++.||+|++... ...+..++++|+.+|.+++++||.+.+|.+..+..++++||||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~ 93 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC 93 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence 466667899999999999999999999999999754 4455677899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
.+|++.+.|.. ...+++..+.-|+.++..||.||| ..+.+|||||+.|||+.++|.+|++|||.+-.......
T Consensus 94 ~gGsv~~lL~~--~~~~~E~~i~~ilre~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~-- 166 (467)
T KOG0201|consen 94 GGGSVLDLLKS--GNILDEFEIAVILREVLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK-- 166 (467)
T ss_pred cCcchhhhhcc--CCCCccceeeeehHHHHHHhhhhh---hcceecccccccceeEeccCcEEEEecceeeeeechhh--
Confidence 99999999954 344688888999999999999999 78899999999999999999999999999876543222
Q ss_pred ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCC
Q 042216 635 VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGN 714 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 714 (767)
.....+||+-|||||+++...|+.|+||||||++.+||++|.+|+..........++ .+-.-|.+.
T Consensus 167 rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflI------------pk~~PP~L~-- 232 (467)
T KOG0201|consen 167 RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLI------------PKSAPPRLD-- 232 (467)
T ss_pred ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEec------------cCCCCCccc--
Confidence 235678999999999999889999999999999999999999999765543222111 111112222
Q ss_pred CChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 715 APPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 715 ~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
..++..+.+++..||+.||+.||++.++++
T Consensus 233 --~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 233 --GDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred --cccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 256777999999999999999999999984
No 49
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.5e-37 Score=325.07 Aligned_cols=256 Identities=25% Similarity=0.447 Sum_probs=208.8
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
.++|+..+.||+|+||.||+|...+ ++.||+|.+.... ...+.+.+|+.++++++|+||+++++++.+.+..+++|||
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~-~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNN-STKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY 82 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecC-CceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence 3568888999999999999999764 4679999886533 3456789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+++|+|.+++++.....+++.+++.++.|++.||+||| ..+++||||||+||+++.++.+||+|||+++.......
T Consensus 83 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~- 158 (261)
T cd05072 83 MAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY- 158 (261)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCCccceecCCCce-
Confidence 99999999997765667899999999999999999999 67899999999999999999999999999986433211
Q ss_pred cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCcccccccccc
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLK 712 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 712 (767)
.......++..|+|||++....++.++|||||||++|||++ |+.||....... ..... ..+. .
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~---~~~~~----~~~~---------~ 222 (261)
T cd05072 159 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD---VMSAL----QRGY---------R 222 (261)
T ss_pred eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH---HHHHH----HcCC---------C
Confidence 11223346678999999998899999999999999999998 999986543221 11111 1111 1
Q ss_pred CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 042216 713 GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFV 751 (767)
Q Consensus 713 ~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~ 751 (767)
......++.++.+++.+||+.+|++||+++++++.|+++
T Consensus 223 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 223 MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 112233566789999999999999999999999999853
No 50
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-39 Score=355.52 Aligned_cols=258 Identities=26% Similarity=0.391 Sum_probs=223.3
Q ss_pred cccceeeeccCcEEEEEEEecCC----CceEEEEEeCCC-CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGD----STPVAIKRLNPG-SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~----~~~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
+...++||+|+||+||+|.+--. +.+||||++... +.+..+++++|+.+|.+|+|||+++|+|+|.... +.||+
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt 776 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT 776 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence 34456899999999999987433 358999998654 5566789999999999999999999999998765 88999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
+||+.|+|.+|++.++ ..+.-+..+.|+.|||+||.||| .+.++||||.++|||+..-..+||+|||+++....+.
T Consensus 777 q~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 777 QLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred HhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence 9999999999998754 46888999999999999999999 7889999999999999999999999999999887776
Q ss_pred CccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCcccccccc
Q 042216 632 KTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPF 710 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 710 (767)
........+-.+.|||-|.+....++.+||||||||++||++| |..|+.+....+..++. ...
T Consensus 853 ~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dll----------------e~g 916 (1177)
T KOG1025|consen 853 KEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLL----------------EKG 916 (1177)
T ss_pred ccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHH----------------hcc
Confidence 6666666667889999999999999999999999999999998 99999877655443333 223
Q ss_pred ccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhh
Q 042216 711 LKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQLL 755 (767)
Q Consensus 711 l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~~ 755 (767)
.+-..|+.|..++..++.+||..|+..||+++++...+.++...+
T Consensus 917 eRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardp 961 (1177)
T KOG1025|consen 917 ERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDP 961 (1177)
T ss_pred ccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCc
Confidence 334568899999999999999999999999999999998877655
No 51
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.9e-37 Score=330.21 Aligned_cols=261 Identities=26% Similarity=0.472 Sum_probs=211.4
Q ss_pred hccccceeeeccCcEEEEEEEecC-----CCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNG-----DSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMIL 549 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~l 549 (767)
.+|...+.||+|+||.||+|+..+ ....+++|.+........+.+.+|++++++++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 357777899999999999998532 335689999876655556779999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCC--------------CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCc
Q 042216 550 VYDYMARGTLRDHLYNND--------------NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWV 615 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~ 615 (767)
||||+++++|.+++.... ...++|.+++.++.|++.||.||| +++|+||||||+|||++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCc
Confidence 999999999999996432 234899999999999999999999 788999999999999999999
Q ss_pred EEEeecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHH
Q 042216 616 AKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWA 694 (767)
Q Consensus 616 ~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~ 694 (767)
+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |+.||......+ ..
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~~--- 235 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE---VI--- 235 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HH---
Confidence 99999999875433222222233456788999999999999999999999999999998 999986544321 11
Q ss_pred HHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 042216 695 TECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQL 754 (767)
Q Consensus 695 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~ 754 (767)
+....+... ..+..++..+.+++.+||+.+|.+||++.+|+++|+.+...
T Consensus 236 -~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 236 -ECITQGRVL---------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred -HHHhCCCCC---------CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 111222111 11233567799999999999999999999999999988653
No 52
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.2e-37 Score=329.14 Aligned_cols=261 Identities=26% Similarity=0.454 Sum_probs=210.8
Q ss_pred hccccceeeeccCcEEEEEEEec-----CCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLN-----GDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMIL 549 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~-----~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~l 549 (767)
.+|...+.||+|+||+||++... .++..+|+|.+..........+.+|++++.+++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 46778889999999999999852 2345699999876665566789999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCC-----------CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEE
Q 042216 550 VYDYMARGTLRDHLYNND-----------NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKV 618 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~~-----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki 618 (767)
||||+++++|.+++.... ...+++.+++.++.|++.||.||| +++++||||||+|||+++++.+||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH---~~~i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCcEEe
Confidence 999999999999986432 235899999999999999999999 788999999999999999999999
Q ss_pred eecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHH
Q 042216 619 SDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATEC 697 (767)
Q Consensus 619 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~ 697 (767)
+|||+++...............++..|+|||.+.+..++.++|||||||+++||++ |+.||......+ .. ..
T Consensus 162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~---~~----~~ 234 (288)
T cd05093 162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE---VI----EC 234 (288)
T ss_pred ccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HH----HH
Confidence 99999875432222122223345778999999999999999999999999999998 899986543221 11 11
Q ss_pred hhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 042216 698 YRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQL 754 (767)
Q Consensus 698 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~ 754 (767)
...+... ..+..++.++.+++.+||+.+|.+|||+.+|++.|+.+.+.
T Consensus 235 i~~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 235 ITQGRVL---------QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred HHcCCcC---------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 1222111 11223556799999999999999999999999999988753
No 53
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-38 Score=342.52 Aligned_cols=242 Identities=27% Similarity=0.413 Sum_probs=208.8
Q ss_pred HhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhcc-ccceeeeEeeeeecCCceE
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDGQMI 548 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~ 548 (767)
..++|..+.+||+|.||+|+++.++++++.+|||.+++.. ..+.+..+.|.+++... +||.|++|+.++..+++++
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 4468999999999999999999999999999999998773 44556678898888877 5999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCC
Q 042216 549 LVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGP 628 (767)
Q Consensus 549 lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~ 628 (767)
+||||+.||++..+.+ ...+++....-++..|+.||+||| .++||+||||.+|||||.+|.+||+||||++..-
T Consensus 446 fvmey~~Ggdm~~~~~---~~~F~e~rarfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHIH---TDVFSEPRARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM 519 (694)
T ss_pred EEEEecCCCcEEEEEe---cccccHHHHHHHHHHHHHHHHHHH---hcCceeeecchhheEEcccCcEEecccccccccC
Confidence 9999999999655543 235899999999999999999999 8899999999999999999999999999999643
Q ss_pred CCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccc
Q 042216 629 NFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIID 708 (767)
Q Consensus 629 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 708 (767)
. ....+...+||+.|||||++.+..|+...|.|||||+||||+.|+.||.+.++++.- |
T Consensus 520 ~--~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~F-------------------d 578 (694)
T KOG0694|consen 520 G--QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVF-------------------D 578 (694)
T ss_pred C--CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHH-------------------H
Confidence 2 334567899999999999999999999999999999999999999999877664322 2
Q ss_pred cccc--CCCChhhHHHHHHHHHHccccCCCCCCCH
Q 042216 709 PFLK--GNAPPVCLNQFVEVAMSCVNDDRIRRPSM 741 (767)
Q Consensus 709 ~~l~--~~~~~~~~~~l~~li~~Cl~~dp~~RPs~ 741 (767)
..+. -.+|.-++.+...++.+++..+|++|.-+
T Consensus 579 sI~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 579 SIVNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HHhcCCCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 2221 23567788899999999999999999866
No 54
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=3e-37 Score=326.55 Aligned_cols=260 Identities=25% Similarity=0.399 Sum_probs=205.9
Q ss_pred hccccceeeeccCcEEEEEEEecCCCc----eEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDST----PVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMIL 549 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~----~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~l 549 (767)
.+|...+.||+|+||.||+|.+..+++ .+++|.+.... .....++..|+.++++++||||+++++++. ....++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence 467778899999999999999865544 47788875432 233467888899999999999999999986 456789
Q ss_pred EEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCC
Q 042216 550 VYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPN 629 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~ 629 (767)
++||+++|+|.+++.... ..++|..+..++.|++.||.||| +++++||||||+|||+++++.+||+|||+++....
T Consensus 86 i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred EEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 999999999999996543 35899999999999999999999 77899999999999999999999999999986533
Q ss_pred CCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCcccccc
Q 042216 630 FSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIID 708 (767)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 708 (767)
...........++..|+|||.+.++.++.++|||||||++|||++ |+.||......+ +.+. ...+..
T Consensus 162 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~---~~~~----~~~~~~----- 229 (279)
T cd05111 162 DDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE---VPDL----LEKGER----- 229 (279)
T ss_pred CCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHH----HHCCCc-----
Confidence 222222334557789999999998899999999999999999998 999986543221 1111 111111
Q ss_pred ccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhh
Q 042216 709 PFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQLL 755 (767)
Q Consensus 709 ~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~~ 755 (767)
...+..+...+.+++.+||..+|.+|||+.|+++.|+.+.+..
T Consensus 230 ----~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~ 272 (279)
T cd05111 230 ----LAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP 272 (279)
T ss_pred ----CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence 1112235567889999999999999999999999998876543
No 55
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=5.2e-38 Score=334.55 Aligned_cols=246 Identities=24% Similarity=0.288 Sum_probs=203.1
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
++|+..+.||+|+||.||++....+++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36788889999999999999998888999999986432 233456889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~-- 153 (291)
T cd05612 81 EYVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD-- 153 (291)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEEecCcchhccC--
Confidence 999999999999654 35899999999999999999999 78899999999999999999999999999875432
Q ss_pred CccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccc
Q 042216 632 KTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFL 711 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 711 (767)
......|++.|+|||.+.+..++.++|||||||++|||++|+.||......+ . ... ...+.
T Consensus 154 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~---~---~~~-i~~~~--------- 214 (291)
T cd05612 154 ---RTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG---I---YEK-ILAGK--------- 214 (291)
T ss_pred ---CcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---H---HHH-HHhCC---------
Confidence 1223468999999999999899999999999999999999999996543211 1 111 11111
Q ss_pred cCCCChhhHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 042216 712 KGNAPPVCLNQFVEVAMSCVNDDRIRRPS-----MSDVVWG 747 (767)
Q Consensus 712 ~~~~~~~~~~~l~~li~~Cl~~dp~~RPs-----~~evl~~ 747 (767)
...+......+.+++.+||+.||.+||+ ++|+++.
T Consensus 215 -~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 215 -LEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred -cCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 1123334567889999999999999995 8887744
No 56
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.1e-37 Score=336.12 Aligned_cols=263 Identities=23% Similarity=0.318 Sum_probs=205.8
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC-cchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEe
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ-QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~e 552 (767)
.++|+..+.||+|+||.||+++....+..+|+|.+..... .....+.+|+++|++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 3578899999999999999999998889999999875432 334568999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK 632 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~ 632 (767)
|+++|+|.+++... ..+++..+..++.|++.||.|||+ ..+|+||||||+|||++.++.+||+|||+++.....
T Consensus 84 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~--~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 157 (331)
T cd06649 84 HMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 157 (331)
T ss_pred cCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhh--cCCEEcCCCChhhEEEcCCCcEEEccCccccccccc--
Confidence 99999999999654 358999999999999999999994 346999999999999999999999999998754221
Q ss_pred ccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCC---c------
Q 042216 633 THVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGK---I------ 703 (767)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~---~------ 703 (767)
......|+..|+|||++.+..++.++|||||||++|||++|+.||......+ +..........+. .
T Consensus 158 --~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 232 (331)
T cd06649 158 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE---LEAIFGRPVVDGEEGEPHSISPR 232 (331)
T ss_pred --ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHhcccccccccCCccccCcc
Confidence 2233468999999999999999999999999999999999999995433211 1111000000000 0
Q ss_pred ---------------------cccccccccC---C-CChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 704 ---------------------GDIIDPFLKG---N-APPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 704 ---------------------~~~~d~~l~~---~-~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
.+..+..... . .....+.++.+++.+||+.||++|||+.|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 233 PRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred cccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000000 0 011245678999999999999999999999865
No 57
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.8e-37 Score=328.01 Aligned_cols=256 Identities=26% Similarity=0.454 Sum_probs=207.6
Q ss_pred hccccceeeeccCcEEEEEEEecC-----CCceEEEEEeCCCCCc-chhHHHHHHHHHhccccceeeeEeeeeecCCceE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNG-----DSTPVAIKRLNPGSQQ-GALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMI 548 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~~vAVK~l~~~~~~-~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~ 548 (767)
.+|...+.||+|+||.||+|...+ .+..||||.++..... ..+.+.+|++++++++|+|++++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 457777899999999999998743 2468999998765444 4568999999999999999999999999999999
Q ss_pred EEEecCCCCChhhhhccCC------------CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcE
Q 042216 549 LVYDYMARGTLRDHLYNND------------NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVA 616 (767)
Q Consensus 549 lV~ey~~~gsL~~~L~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ 616 (767)
+||||+++|+|.+++.... ...+++.++..++.|++.||.||| +++++||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA---SQHFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeeccccccceEEEcCCCeE
Confidence 9999999999999996432 245889999999999999999999 7889999999999999999999
Q ss_pred EEeecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHH
Q 042216 617 KVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWAT 695 (767)
Q Consensus 617 ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~ 695 (767)
||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |+.||......+ ....
T Consensus 162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~---~~~~-- 236 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE---VIEC-- 236 (280)
T ss_pred EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HHHH--
Confidence 9999999875432221122233346788999999999999999999999999999998 999986543321 1111
Q ss_pred HHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 042216 696 ECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLE 749 (767)
Q Consensus 696 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~ 749 (767)
...+.. ...+..++..+.+++.+||+.||.+||++.||++.|+
T Consensus 237 --~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 237 --ITQGRL---------LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred --HHcCCc---------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 112111 1123345678999999999999999999999999886
No 58
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.8e-37 Score=324.63 Aligned_cols=256 Identities=28% Similarity=0.493 Sum_probs=208.3
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
.++|+..+.||+|++|.||+|...++ +.||+|.++... ...+++.+|++++++++|+|++++++++...+..+++|||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNT-TPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL 82 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCC-eEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence 45688888999999999999997654 689999987543 3456789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+++++|.+++.......+++.++..++.|++.||.||| +.+++|+||||+||++++++.+||+|||+++.......
T Consensus 83 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~- 158 (261)
T cd05068 83 MKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY- 158 (261)
T ss_pred ccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc-
Confidence 99999999997655557899999999999999999999 77899999999999999999999999999876432111
Q ss_pred cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCcccccccccc
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLK 712 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 712 (767)
........+..|+|||++.+..++.++||||||++++||++ |+.||....... +.. ..... ..
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~----~~~~~---------~~ 222 (261)
T cd05068 159 EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE---VLQ----QVDQG---------YR 222 (261)
T ss_pred cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HHH----HHHcC---------CC
Confidence 11111223467999999999999999999999999999999 999986543211 111 11111 11
Q ss_pred CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 042216 713 GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFV 751 (767)
Q Consensus 713 ~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~ 751 (767)
...+..++..+.+++.+|++.+|.+||++.++++.|+.+
T Consensus 223 ~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 223 MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 122344567899999999999999999999999999853
No 59
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.7e-37 Score=329.55 Aligned_cols=266 Identities=20% Similarity=0.253 Sum_probs=203.6
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC--CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEe
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS--QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~e 552 (767)
++|...+.||+|+||.||+++.+.+++.+|+|++.... ......+.+|+++++.++||||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 36888899999999999999999888999999986542 2334568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK 632 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~ 632 (767)
|++++.|..+... ...+++..+..++.|++.||.||| ..+|+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 154 (287)
T cd07848 81 YVEKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS- 154 (287)
T ss_pred cCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccc-
Confidence 9998777655432 345899999999999999999999 7889999999999999999999999999998643211
Q ss_pred ccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHH---------HHHhhcCCc
Q 042216 633 THVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWA---------TECYRNGKI 703 (767)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~---------~~~~~~~~~ 703 (767)
........|+..|+|||++.+..++.++|||||||++|||++|++||......+........ .........
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07848 155 NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRF 234 (287)
T ss_pred cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchh
Confidence 11223456899999999999888999999999999999999999999654432211111100 000001001
Q ss_pred ccccccccc------CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 704 GDIIDPFLK------GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 704 ~~~~d~~l~------~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.....+... .......+..+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 235 HGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred cccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 111001000 0111224567999999999999999999999874
No 60
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=2.1e-37 Score=327.18 Aligned_cols=258 Identities=24% Similarity=0.449 Sum_probs=205.7
Q ss_pred HhhccccceeeeccCcEEEEEEEecC-----CCceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecCCc
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLNG-----DSTPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQ 546 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~ 546 (767)
.+++|+..+.||+|+||.||+|...+ .+..||||++.... .....++.+|+.+++.++||||+++++++.+++.
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 46779999999999999999998643 23579999986432 2345578999999999999999999999999999
Q ss_pred eEEEEecCCCCChhhhhccCC--------CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEE
Q 042216 547 MILVYDYMARGTLRDHLYNND--------NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKV 618 (767)
Q Consensus 547 ~~lV~ey~~~gsL~~~L~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki 618 (767)
.++||||+++|+|.+++.+.. ...+++..+..++.|++.||.||| +.+++|+||||+|||+++++.+||
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCcchheEEEcCCCCEEE
Confidence 999999999999999986432 234688999999999999999999 778999999999999999999999
Q ss_pred eecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHH
Q 042216 619 SDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATEC 697 (767)
Q Consensus 619 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~ 697 (767)
+|||+++...............++..|+|||++..+.++.++|||||||++|||++ |..||......+ ....
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~---~~~~---- 233 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQ---VLRF---- 233 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHH----
Confidence 99999875432222111222345778999999998899999999999999999999 788886543321 1111
Q ss_pred hhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 042216 698 YRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLE 749 (767)
Q Consensus 698 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~ 749 (767)
....... ..+..++..+.+++.+||+.+|++|||+.|+++.|+
T Consensus 234 ~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 234 VMEGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHcCCcC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 1111111 123345678999999999999999999999999886
No 61
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.3e-37 Score=351.73 Aligned_cols=252 Identities=20% Similarity=0.305 Sum_probs=206.4
Q ss_pred ccccceeeeccCcEEEEEEEecCC-CceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGD-STPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~-~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
.|...+.||+|+||.||++....+ +..||+|.+..........+.+|+.+|+.++||||+++++++..++..+|||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 388888999999999999988766 6788999876555555556888999999999999999999999999999999999
Q ss_pred CCCChhhhhccC--CCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC
Q 042216 555 ARGTLRDHLYNN--DNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK 632 (767)
Q Consensus 555 ~~gsL~~~L~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~ 632 (767)
++|+|.++|+.. ...++++.++..++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++.......
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 999999988542 3446899999999999999999999 78899999999999999999999999999986543222
Q ss_pred ccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccccccc
Q 042216 633 THVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLK 712 (767)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 712 (767)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...... ....... .+..
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~------~~~~~~~-~~~~--------- 288 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR------EIMQQVL-YGKY--------- 288 (478)
T ss_pred cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHH-hCCC---------
Confidence 22334566999999999999999999999999999999999999999643321 1111111 1111
Q ss_pred CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 713 GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 713 ~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
...+..++.++.+++.+||+.||++||++.+++.
T Consensus 289 ~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 289 DPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 1123345678999999999999999999999874
No 62
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.4e-37 Score=338.20 Aligned_cols=261 Identities=26% Similarity=0.438 Sum_probs=206.0
Q ss_pred hccccceeeeccCcEEEEEEEecC-----CCceEEEEEeCCCC-CcchhHHHHHHHHHhcc-ccceeeeEeeeeecC-Cc
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNG-----DSTPVAIKRLNPGS-QQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDD-GQ 546 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~-~~ 546 (767)
++|+..+.||+|+||.||+|...+ .++.||+|+++... ....+.+.+|++++.++ +|+||++++++|... ..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 467888899999999999997543 23689999987543 23345678899999999 899999999988654 57
Q ss_pred eEEEEecCCCCChhhhhccCC-----------------------------------------------------------
Q 042216 547 MILVYDYMARGTLRDHLYNND----------------------------------------------------------- 567 (767)
Q Consensus 547 ~~lV~ey~~~gsL~~~L~~~~----------------------------------------------------------- 567 (767)
+++++||+++|+|.+++....
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 889999999999999885421
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccccccCCCcccC
Q 042216 568 NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLD 647 (767)
Q Consensus 568 ~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~a 647 (767)
...++|.++..++.|++.||.||| +.+|+||||||+|||+++++.+||+|||+++...............++..|+|
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 243 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 243 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccC
Confidence 126899999999999999999999 78899999999999999999999999999986433221112223446778999
Q ss_pred hhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHH
Q 042216 648 PEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEV 726 (767)
Q Consensus 648 PE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l 726 (767)
||++.+..++.++|||||||+|+||++ |+.||......+ .+.. ....+. ....+...+.++.++
T Consensus 244 PE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~--~~~~----~~~~~~---------~~~~~~~~~~~~~~l 308 (337)
T cd05054 244 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE--EFCR----RLKEGT---------RMRAPEYATPEIYSI 308 (337)
T ss_pred cHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH--HHHH----HHhccC---------CCCCCccCCHHHHHH
Confidence 999999999999999999999999998 999986533221 1111 111111 111233456789999
Q ss_pred HHHccccCCCCCCCHHHHHHHHHHhHh
Q 042216 727 AMSCVNDDRIRRPSMSDVVWGLEFVFQ 753 (767)
Q Consensus 727 i~~Cl~~dp~~RPs~~evl~~L~~~~~ 753 (767)
+.+||+.+|++||++.||++.|+.+++
T Consensus 309 ~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 309 MLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 999999999999999999999998876
No 63
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=9.6e-38 Score=332.56 Aligned_cols=261 Identities=26% Similarity=0.459 Sum_probs=210.3
Q ss_pred HhhccccceeeeccCcEEEEEEEecCC-----CceEEEEEeCCC-CCcchhHHHHHHHHHhcc-ccceeeeEeeeeecCC
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLNGD-----STPVAIKRLNPG-SQQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDG 545 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~~~-----~~~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~ 545 (767)
..++|+..+.||+|+||.||++...+. ...+|+|.+... ......++.+|++++.++ +|+||+++++++..++
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 89 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence 445788888999999999999987543 367999998754 233445688999999999 8999999999999999
Q ss_pred ceEEEEecCCCCChhhhhccC--------------CCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEEC
Q 042216 546 QMILVYDYMARGTLRDHLYNN--------------DNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLD 611 (767)
Q Consensus 546 ~~~lV~ey~~~gsL~~~L~~~--------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld 611 (767)
..+++|||+++|+|.+++... ....+++..++.++.|++.||.||| +.+|+||||||+|||++
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~Nil~~ 166 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SKKCIHRDLAARNVLVT 166 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCccccccceeeEEEc
Confidence 999999999999999998642 2346899999999999999999999 78899999999999999
Q ss_pred CCCcEEEeecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhH
Q 042216 612 EEWVAKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNL 690 (767)
Q Consensus 612 ~~~~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l 690 (767)
+++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||......+ .
T Consensus 167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~ 243 (293)
T cd05053 167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE---L 243 (293)
T ss_pred CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH---H
Confidence 999999999999986543222122223345678999999998899999999999999999997 999985443211 1
Q ss_pred HHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 042216 691 AVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVF 752 (767)
Q Consensus 691 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~ 752 (767)
. .....+ .....+..++.++.+++.+||+.+|++|||+.|+++.|+.++
T Consensus 244 ~----~~~~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 244 F----KLLKEG---------YRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred H----HHHHcC---------CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 1 111111 111234456678999999999999999999999999999875
No 64
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-38 Score=341.25 Aligned_cols=250 Identities=26% Similarity=0.389 Sum_probs=213.4
Q ss_pred cceeeeccCcEEEEEEEecCC---CceEEEEEeCCCCCc-chhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 479 NLLIIGRGGFGNVYKGFLNGD---STPVAIKRLNPGSQQ-GALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 479 ~~~~LG~G~fG~Vy~g~~~~~---~~~vAVK~l~~~~~~-~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
..++||+|+||.|++|.++.. ...||||.++..... ...+|.+|+.+|.+|+|||+++|+|...+ ..+.||+|.+
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELa 192 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELA 192 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhc
Confidence 344799999999999998643 247999999877654 67789999999999999999999999987 6888999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
+.|||.+.|++.....|-...+..+|.|||.||.||. ++++|||||.++|+||-..-.+|||||||.+.........
T Consensus 193 plGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Y 269 (1039)
T KOG0199|consen 193 PLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMY 269 (1039)
T ss_pred ccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeecccceeccCCCCcce
Confidence 9999999998866667888999999999999999999 8899999999999999999999999999999765444433
Q ss_pred ccc-cccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCcccccccccc
Q 042216 635 VST-QVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLK 712 (767)
Q Consensus 635 ~~~-~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 712 (767)
... ...-.+.|+|||.++...++.+||||+|||+||||++ |+.||-+.... .+.+.+|..-+
T Consensus 270 vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~----------------qIL~~iD~~er 333 (1039)
T KOG0199|consen 270 VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI----------------QILKNIDAGER 333 (1039)
T ss_pred EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH----------------HHHHhcccccc
Confidence 333 4456789999999999999999999999999999998 88998554332 12233455555
Q ss_pred CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 042216 713 GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGL 748 (767)
Q Consensus 713 ~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L 748 (767)
-..|..|+++++++++.||..+|.+|||+..|.+.+
T Consensus 334 LpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 334 LPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred CCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 567889999999999999999999999999998554
No 65
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=8.2e-38 Score=339.67 Aligned_cols=254 Identities=26% Similarity=0.320 Sum_probs=205.6
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
++|+..+.||+|+||.||+|.....++.||||++.... ......+.+|++++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36888899999999999999998888899999986432 234456889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
||+++|+|.+++... ..+++.++..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-- 153 (333)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEEeCcCCccccc--
Confidence 999999999999543 45899999999999999999999 78899999999999999999999999999875432
Q ss_pred CccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccc
Q 042216 632 KTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFL 711 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 711 (767)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.... .. ... ..+....
T Consensus 154 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~---i~---~~~---~~~~~~~ 221 (333)
T cd05600 154 ---YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWEN---LK---YWK---ETLQRPV 221 (333)
T ss_pred ---ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHH---HH---hcc---ccccCCC
Confidence 22345689999999999999999999999999999999999999965433211110 00 000 0000000
Q ss_pred cCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 712 KGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 712 ~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
........+.++.+++.+||+.+|.+||++.++++.
T Consensus 222 ~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 222 YDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 000012346778999999999999999999999854
No 66
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=6.3e-38 Score=339.06 Aligned_cols=241 Identities=25% Similarity=0.323 Sum_probs=199.2
Q ss_pred eeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCC
Q 042216 482 IIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGT 558 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gs 558 (767)
+||+|+||.||+++...+++.||+|++... .......+.+|++++.+++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~ 81 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCc
Confidence 699999999999999888899999998753 22334567889999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcccccc
Q 042216 559 LRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQ 638 (767)
Q Consensus 559 L~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~ 638 (767)
|.+++... ..+++.++..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.... .......
T Consensus 82 L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~--~~~~~~~ 154 (323)
T cd05571 82 LFFHLSRE--RVFSEDRARFYGAEIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGIS--DGATMKT 154 (323)
T ss_pred HHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCCccccc--CCCcccc
Confidence 99998653 46899999999999999999999 78899999999999999999999999999874322 1122234
Q ss_pred ccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChh
Q 042216 639 VKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPV 718 (767)
Q Consensus 639 ~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 718 (767)
..||+.|+|||++.+..++.++|||||||++|||++|+.||....... +... ...+. ...+..
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~---~~~~----~~~~~----------~~~p~~ 217 (323)
T cd05571 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK---LFEL----ILMEE----------IRFPRT 217 (323)
T ss_pred eecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHH---HHHH----HHcCC----------CCCCCC
Confidence 569999999999999999999999999999999999999996543211 1111 11111 122344
Q ss_pred hHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 042216 719 CLNQFVEVAMSCVNDDRIRRP-----SMSDVVW 746 (767)
Q Consensus 719 ~~~~l~~li~~Cl~~dp~~RP-----s~~evl~ 746 (767)
.+.++.+++.+||+.||++|| ++.++++
T Consensus 218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 218 LSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 567789999999999999999 7888874
No 67
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=3e-37 Score=328.42 Aligned_cols=259 Identities=25% Similarity=0.415 Sum_probs=206.7
Q ss_pred ccccceeeeccCcEEEEEEEecC-----CCceEEEEEeCCCCC-cchhHHHHHHHHHhccccceeeeEeeeeecCCceEE
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNG-----DSTPVAIKRLNPGSQ-QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMIL 549 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~-----~~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~l 549 (767)
+|+..+.||+|+||.||+|+... +...+++|.+..... ....++.+|+.+++.++||||+++++.|...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 36677789999999999998743 225688998865432 334678999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccC----------------------CCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCC
Q 042216 550 VYDYMARGTLRDHLYNN----------------------DNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTN 607 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~----------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~N 607 (767)
++||+.+|+|.+++... ....+++.+++.++.|++.||.||| +.+++||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA---EMKLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH---HCCeehhhhhhhe
Confidence 99999999999988532 1235889999999999999999999 7889999999999
Q ss_pred eEECCCCcEEEeecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCcc
Q 042216 608 ILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKK 686 (767)
Q Consensus 608 ILld~~~~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~ 686 (767)
||+++++.+||+|||+++...............++..|+|||.+.+..++.++||||||++++||++ |+.||......+
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~ 237 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER 237 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 9999999999999999875432211111223345678999999988899999999999999999998 999985443221
Q ss_pred chhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 042216 687 QVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQ 753 (767)
Q Consensus 687 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~ 753 (767)
+.. .... ......+..++.++.+++.+||+.+|.+||++.++++.|++++.
T Consensus 238 ---~~~----~~~~---------~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 238 ---LFN----LLKT---------GYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred ---HHH----HHhC---------CCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 111 1111 11222344566789999999999999999999999999998864
No 68
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=7.9e-38 Score=339.15 Aligned_cols=245 Identities=26% Similarity=0.370 Sum_probs=203.2
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
.+|...+.||+|+||.||+|+.+.+++.||+|++... .....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 5688889999999999999999888899999998643 2233456889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
||+++|+|.+++... ..+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++.....
T Consensus 98 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~- 171 (329)
T PTZ00263 98 EFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR- 171 (329)
T ss_pred cCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC-
Confidence 999999999999654 45889999999999999999999 788999999999999999999999999998754321
Q ss_pred CccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccc
Q 042216 632 KTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFL 711 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 711 (767)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ . ......+..
T Consensus 172 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~---~----~~~i~~~~~-------- 232 (329)
T PTZ00263 172 ----TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR---I----YEKILAGRL-------- 232 (329)
T ss_pred ----cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH---H----HHHHhcCCc--------
Confidence 123568999999999999999999999999999999999999996433211 1 111111111
Q ss_pred cCCCChhhHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 042216 712 KGNAPPVCLNQFVEVAMSCVNDDRIRRPS-----MSDVVW 746 (767)
Q Consensus 712 ~~~~~~~~~~~l~~li~~Cl~~dp~~RPs-----~~evl~ 746 (767)
..+.....++.+++.+||+.||.+||+ +++++.
T Consensus 233 --~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 233 --KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred --CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 123334567889999999999999996 677773
No 69
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=4.9e-37 Score=320.45 Aligned_cols=251 Identities=27% Similarity=0.450 Sum_probs=202.3
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
++|+..+.||+|+||.||++.++.. ..+|+|.+... .....++.+|++++++++||||+++++++.+.+..++||||+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~-~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~ 81 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQ-IKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFM 81 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccC-ceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcC
Confidence 4577788999999999999988754 67999988643 233567899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
++|+|.++++... ..++|..+..++.|++.||.||| +++++|+||||+||++++++.+||+|||+++....... .
T Consensus 82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~-~ 156 (256)
T cd05114 82 ENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY-T 156 (256)
T ss_pred CCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCCccccCCCce-e
Confidence 9999999986543 35899999999999999999999 78899999999999999999999999999875432111 1
Q ss_pred ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccC
Q 042216 635 VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKG 713 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 713 (767)
......++..|+|||.+.+..++.++||||||+++|||++ |+.||...... ...... ..+. ..
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~---~~~~~i----~~~~---------~~ 220 (256)
T cd05114 157 SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY---EVVEMI----SRGF---------RL 220 (256)
T ss_pred ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHH----HCCC---------CC
Confidence 1122335678999999998899999999999999999999 89998544321 111111 1111 01
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 042216 714 NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGL 748 (767)
Q Consensus 714 ~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L 748 (767)
..+...+.++.+++.+||+.+|.+||++.++++.|
T Consensus 221 ~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 221 YRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 11223456789999999999999999999999887
No 70
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.5e-37 Score=327.69 Aligned_cols=257 Identities=26% Similarity=0.425 Sum_probs=205.2
Q ss_pred hccccceeeeccCcEEEEEEEec----CCCceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLN----GDSTPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMIL 549 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~----~~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~l 549 (767)
.+|+..+.||+|+||.||+|... ..+..+++|.+.... .+...++.+|++++++++||||+++++++..+...++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 45777789999999999999852 244789999987543 3334678999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCC---------------CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCC
Q 042216 550 VYDYMARGTLRDHLYNND---------------NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEW 614 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~~---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~ 614 (767)
+|||+++|+|.+++.... ...+++.+++.++.|++.||.||| +++++||||||+|||+++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS---SHFFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hcCeehhccccceEEEcCCC
Confidence 999999999999985321 235889999999999999999999 78899999999999999999
Q ss_pred cEEEeecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHH
Q 042216 615 VAKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVW 693 (767)
Q Consensus 615 ~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~ 693 (767)
.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||...... ....
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~---~~~~- 237 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ---EVIE- 237 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH---HHHH-
Confidence 999999999975432222222233446778999999988889999999999999999998 99998654321 1111
Q ss_pred HHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 042216 694 ATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEF 750 (767)
Q Consensus 694 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~ 750 (767)
....... ...+..++.++.+++.+||+.||.+||++.+|++.|+.
T Consensus 238 ---~~~~~~~---------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 238 ---MVRKRQL---------LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred ---HHHcCCc---------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1111111 11234456789999999999999999999999998864
No 71
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=4.1e-37 Score=320.08 Aligned_cols=248 Identities=28% Similarity=0.443 Sum_probs=200.1
Q ss_pred eeeccCcEEEEEEEecCCCceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCChh
Q 042216 482 IIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGTLR 560 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gsL~ 560 (767)
.||+|+||.||+|+...+++.+|+|...... ......+.+|++++++++||||++++++|...+..++||||+++++|.
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 81 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL 81 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHH
Confidence 6899999999999998788899999876443 333456899999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcccccccc
Q 042216 561 DHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQVK 640 (767)
Q Consensus 561 ~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~~ 640 (767)
+++.... ..+++.+++.++.|++.||.||| +.+++|+||||+|||++.++.+||+|||+++...............
T Consensus 82 ~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 157 (252)
T cd05084 82 TFLRTEG-PRLKVKELIQMVENAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQ 157 (252)
T ss_pred HHHHhCC-CCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCC
Confidence 9996543 45899999999999999999999 7889999999999999999999999999987533211111111122
Q ss_pred CCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhh
Q 042216 641 GSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVC 719 (767)
Q Consensus 641 gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 719 (767)
.+..|+|||.+.++.++.++|||||||++|||++ |..||....... . ...... ......+..+
T Consensus 158 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~---~----~~~~~~---------~~~~~~~~~~ 221 (252)
T cd05084 158 IPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ---T----REAIEQ---------GVRLPCPELC 221 (252)
T ss_pred CceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH---H----HHHHHc---------CCCCCCcccC
Confidence 3467999999998899999999999999999998 888885433211 1 111111 1112234455
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 042216 720 LNQFVEVAMSCVNDDRIRRPSMSDVVWGLE 749 (767)
Q Consensus 720 ~~~l~~li~~Cl~~dp~~RPs~~evl~~L~ 749 (767)
+..+.+++.+||+.+|++||++.+|+++|+
T Consensus 222 ~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 222 PDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 678999999999999999999999999886
No 72
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=3.4e-37 Score=327.76 Aligned_cols=265 Identities=20% Similarity=0.304 Sum_probs=202.3
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
++|...+.||+|+||.||+|..+.+++.||+|+++... ......+.+|++++++++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 46888899999999999999998888999999986543 23344678999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+++ +|.+++.... ..+++..+..++.|++.||+||| +++|+||||||+|||+++++.+||+|||+++......
T Consensus 85 ~~~-~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~-- 157 (288)
T cd07871 85 LDS-DLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPT-- 157 (288)
T ss_pred CCc-CHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCC--
Confidence 985 9999886443 35789999999999999999999 7889999999999999999999999999987532211
Q ss_pred cccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHH-----HHhhc----CCc
Q 042216 634 HVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWAT-----ECYRN----GKI 703 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~-----~~~~~----~~~ 703 (767)
.......+++.|+|||.+.+ ..++.++||||+||++|||++|++||......+......... ..+.. ...
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd07871 158 KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEF 237 (288)
T ss_pred ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhh
Confidence 12233457899999998865 568999999999999999999999996654332221111000 00000 000
Q ss_pred cccccccccC----CCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 704 GDIIDPFLKG----NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 704 ~~~~d~~l~~----~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.....+..+. ...+....++.+++.+|++.||.+|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 238 RSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0011111000 001223567889999999999999999999974
No 73
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=3.7e-37 Score=327.56 Aligned_cols=261 Identities=21% Similarity=0.300 Sum_probs=197.1
Q ss_pred ccccceeeeccCcEEEEEEEec-CCCceEEEEEeCCCC--CcchhHHHHHHHHHhcc---ccceeeeEeeeee-----cC
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLN-GDSTPVAIKRLNPGS--QQGALEFQTEIGMLSQL---RYLHLVSLIGYCN-----DD 544 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~-~~~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l---~Hpniv~l~g~~~-----~~ 544 (767)
+|...+.||+|+||.||+|... .+++.||+|++.... ......+.+|+.+++.+ +||||++++++|. ..
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 6788889999999999999874 345789999886542 22234566777777665 6999999999985 34
Q ss_pred CceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCc
Q 042216 545 GQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLC 624 (767)
Q Consensus 545 ~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla 624 (767)
...++||||++ ++|.+++.......+++.++..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~ 157 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLA 157 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCCEEEccccce
Confidence 56899999997 59999997665566899999999999999999999 788999999999999999999999999998
Q ss_pred ccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhc---C
Q 042216 625 KFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRN---G 701 (767)
Q Consensus 625 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~---~ 701 (767)
+..... .......|+..|+|||.+....++.++|||||||++|||++|++||......+.. .. ....... .
T Consensus 158 ~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~--~~-i~~~~~~~~~~ 231 (290)
T cd07862 158 RIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL--GK-ILDVIGLPGEE 231 (290)
T ss_pred EeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHH--HH-HHHHhCCCChh
Confidence 754321 2233456899999999999889999999999999999999999999765432211 11 1111000 0
Q ss_pred Cc-------cccccccccC---CCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 702 KI-------GDIIDPFLKG---NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 702 ~~-------~~~~d~~l~~---~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.. .....+.... ...+.....+.+++.+||+.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 232 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 00 0000000000 011234566789999999999999999999974
No 74
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=4.5e-37 Score=329.20 Aligned_cols=260 Identities=23% Similarity=0.390 Sum_probs=208.2
Q ss_pred hhccccceeeeccCcEEEEEEEec-----CCCceEEEEEeCCCC-CcchhHHHHHHHHHhcc-ccceeeeEeeeeecCCc
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLN-----GDSTPVAIKRLNPGS-QQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDGQ 546 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~-----~~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~ 546 (767)
.++|...+.||+|+||.||++... .....+|||+++... ....+.+.+|+++++++ +||||+++++++...+.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 356888889999999999999752 234579999987543 23345689999999999 79999999999999999
Q ss_pred eEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCccc
Q 042216 547 MILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKF 626 (767)
Q Consensus 547 ~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~ 626 (767)
.+++|||+++|+|.++++......+++.++..++.|++.||.||| +++|+|+||||+|||++.++.+||+|||+++.
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~ 190 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICDFGLARD 190 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeehhhhccceEEEcCCCeEEECCCccccc
Confidence 999999999999999997655455899999999999999999999 78899999999999999999999999999875
Q ss_pred CCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccc
Q 042216 627 GPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGD 705 (767)
Q Consensus 627 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~ 705 (767)
..............++..|+|||.+....++.++|||||||++|||++ |..||......+ .+.. ....+
T Consensus 191 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~--~~~~----~~~~~---- 260 (302)
T cd05055 191 IMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS--KFYK----LIKEG---- 260 (302)
T ss_pred ccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH--HHHH----HHHcC----
Confidence 433221112222345778999999998899999999999999999998 999986543321 1111 11111
Q ss_pred cccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 042216 706 IIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFV 751 (767)
Q Consensus 706 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~ 751 (767)
.....+...+.++.+++.+||+.+|++||++.||++.|+++
T Consensus 261 -----~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 261 -----YRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred -----CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 11112223456789999999999999999999999999875
No 75
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.4e-37 Score=334.79 Aligned_cols=240 Identities=24% Similarity=0.306 Sum_probs=196.9
Q ss_pred eeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCCh
Q 042216 483 IGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGTL 559 (767)
Q Consensus 483 LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gsL 559 (767)
||+|+||.||++....+++.||+|++... .......+.+|++++.+++||||+++++++.+.+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 69999999999999888889999998643 233455688999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccccc
Q 042216 560 RDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQV 639 (767)
Q Consensus 560 ~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~ 639 (767)
.+++... ..+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++.... ........
T Consensus 81 ~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~--~~~~~~~~ 153 (312)
T cd05585 81 FHHLQRE--GRFDLSRARFYTAELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMK--DDDKTNTF 153 (312)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccCcc--CCCccccc
Confidence 9999653 45899999999999999999999 78899999999999999999999999999875322 11223345
Q ss_pred cCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhh
Q 042216 640 KGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVC 719 (767)
Q Consensus 640 ~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 719 (767)
.||+.|+|||++.+..++.++|||||||++|||++|+.||...... ........ +. ...+...
T Consensus 154 ~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~------~~~~~~~~-~~----------~~~~~~~ 216 (312)
T cd05585 154 CGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN------EMYRKILQ-EP----------LRFPDGF 216 (312)
T ss_pred cCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH------HHHHHHHc-CC----------CCCCCcC
Confidence 6899999999999999999999999999999999999999643221 11111111 11 1123445
Q ss_pred HHHHHHHHHHccccCCCCCCC---HHHHHH
Q 042216 720 LNQFVEVAMSCVNDDRIRRPS---MSDVVW 746 (767)
Q Consensus 720 ~~~l~~li~~Cl~~dp~~RPs---~~evl~ 746 (767)
+.++.+++.+||+.||.+||+ +.|++.
T Consensus 217 ~~~~~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 217 DRDAKDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred CHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 677899999999999999985 566553
No 76
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=5.4e-37 Score=339.77 Aligned_cols=261 Identities=25% Similarity=0.396 Sum_probs=207.2
Q ss_pred hhccccceeeeccCcEEEEEEEecC-----CCceEEEEEeCCCCC-cchhHHHHHHHHHhccc-cceeeeEeeeeecCCc
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNG-----DSTPVAIKRLNPGSQ-QGALEFQTEIGMLSQLR-YLHLVSLIGYCNDDGQ 546 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~-Hpniv~l~g~~~~~~~ 546 (767)
.+++...+.||+|+||.||+|++.+ .++.||||+++.... ...+.+.+|+++|.++. ||||++++++|...+.
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~ 115 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGP 115 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCC
Confidence 3456777899999999999998643 345799999975432 23456889999999997 9999999999999999
Q ss_pred eEEEEecCCCCChhhhhccCC-----------------------------------------------------------
Q 042216 547 MILVYDYMARGTLRDHLYNND----------------------------------------------------------- 567 (767)
Q Consensus 547 ~~lV~ey~~~gsL~~~L~~~~----------------------------------------------------------- 567 (767)
.++|+||+++|+|.++|++..
T Consensus 116 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (401)
T cd05107 116 IYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDM 195 (401)
T ss_pred cEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcc
Confidence 999999999999999996431
Q ss_pred -------------------------------------CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEE
Q 042216 568 -------------------------------------NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILL 610 (767)
Q Consensus 568 -------------------------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl 610 (767)
...+++..++.++.|++.||.||| +.+++||||||+|||+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrdlkp~NiLl 272 (401)
T cd05107 196 KGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA---SKNCVHRDLAARNVLI 272 (401)
T ss_pred hhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCcCcccCCcceEEE
Confidence 124678889999999999999999 7889999999999999
Q ss_pred CCCCcEEEeecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchh
Q 042216 611 DEEWVAKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVN 689 (767)
Q Consensus 611 d~~~~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~ 689 (767)
++++.+||+|||+++...............++..|+|||.+....++.++|||||||++|||++ |+.||......+.
T Consensus 273 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~-- 350 (401)
T cd05107 273 CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ-- 350 (401)
T ss_pred eCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH--
Confidence 9999999999999875422111111222346788999999998889999999999999999998 8899854432211
Q ss_pred HHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 042216 690 LAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVF 752 (767)
Q Consensus 690 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~ 752 (767)
.......+ .+...+..++.++.+++.+||+.+|.+||+++||++.|+.++
T Consensus 351 ----~~~~~~~~---------~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 351 ----FYNAIKRG---------YRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred ----HHHHHHcC---------CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 11111111 111234456678999999999999999999999999999875
No 77
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=6.9e-37 Score=323.39 Aligned_cols=258 Identities=25% Similarity=0.390 Sum_probs=205.7
Q ss_pred HhhccccceeeeccCcEEEEEEEecC-----CCceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecCCc
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLNG-----DSTPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQ 546 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~ 546 (767)
.+++|...+.||+|++|.||+|.+.. ....|++|...... ......|..|+.++++++|+||+++++++.+.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 34678889999999999999999976 56789999886543 3334568999999999999999999999999999
Q ss_pred eEEEEecCCCCChhhhhccCC-----CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCC---cEEE
Q 042216 547 MILVYDYMARGTLRDHLYNND-----NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEW---VAKV 618 (767)
Q Consensus 547 ~~lV~ey~~~gsL~~~L~~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~---~~ki 618 (767)
.++||||+++|+|.+++.+.. ...++|.+++.++.|++.||+||| +.+++|+||||+|||++.++ .+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchheEEEeccCCCcceEe
Confidence 999999999999999986543 135899999999999999999999 77899999999999998654 6999
Q ss_pred eecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHH
Q 042216 619 SDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATEC 697 (767)
Q Consensus 619 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~ 697 (767)
+|||+++................+..|+|||++.+..++.++|||||||++|||++ |+.||......+ +.. .
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~---~~~----~ 233 (277)
T cd05036 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE---VME----F 233 (277)
T ss_pred ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHH----H
Confidence 99999986422111111112233568999999998999999999999999999997 999986543321 111 1
Q ss_pred hhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 042216 698 YRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLE 749 (767)
Q Consensus 698 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~ 749 (767)
... ..+...+..++..+.+++.+||+.+|++||++.+|++.|+
T Consensus 234 ~~~---------~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 234 VTG---------GGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHc---------CCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 111 1112234456678999999999999999999999999886
No 78
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.9e-37 Score=335.22 Aligned_cols=241 Identities=24% Similarity=0.321 Sum_probs=198.4
Q ss_pred eeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCC
Q 042216 482 IIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGT 558 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gs 558 (767)
.||+|+||.||++....+++.||+|++... .......+.+|+++++.++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCc
Confidence 699999999999999888899999998653 22344567889999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcccccc
Q 042216 559 LRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQ 638 (767)
Q Consensus 559 L~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~ 638 (767)
|..++... ..+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++..... ......
T Consensus 82 L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~--~~~~~~ 154 (323)
T cd05595 82 LFFHLSRE--RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKT 154 (323)
T ss_pred HHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHhccccCC--CCcccc
Confidence 99988544 35899999999999999999999 788999999999999999999999999998743221 112234
Q ss_pred ccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChh
Q 042216 639 VKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPV 718 (767)
Q Consensus 639 ~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 718 (767)
..||+.|+|||++.+..++.++|||||||++|||++|+.||......... .... ... ...+..
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~------~~~~-~~~----------~~~p~~ 217 (323)
T cd05595 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF------ELIL-MEE----------IRFPRT 217 (323)
T ss_pred ccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHH------HHHh-cCC----------CCCCCC
Confidence 56899999999999999999999999999999999999999654322111 1111 000 112344
Q ss_pred hHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 042216 719 CLNQFVEVAMSCVNDDRIRRP-----SMSDVVW 746 (767)
Q Consensus 719 ~~~~l~~li~~Cl~~dp~~RP-----s~~evl~ 746 (767)
.+.++.+++.+||+.||.+|| ++.++++
T Consensus 218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 218 LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred CCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 567889999999999999998 8888874
No 79
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=9e-37 Score=322.76 Aligned_cols=261 Identities=24% Similarity=0.389 Sum_probs=207.8
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCc----eEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecCCceE
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDST----PVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMI 548 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~----~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~ 548 (767)
..+|+..+.||+|+||+||+|++...+. .||+|.++... .....++.+|+.++..++|+||++++++|... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcE
Confidence 3568888899999999999998765544 48999987543 33456788999999999999999999999754 578
Q ss_pred EEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCC
Q 042216 549 LVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGP 628 (767)
Q Consensus 549 lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~ 628 (767)
+++||+++|+|.++++... ..+++.+++.++.|++.||.||| +++++||||||+|||+++++.+||+|||+++...
T Consensus 85 l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLARLLD 160 (279)
T ss_pred EEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCCCceeecc
Confidence 9999999999999996543 35899999999999999999999 7889999999999999999999999999998654
Q ss_pred CCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccc
Q 042216 629 NFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDII 707 (767)
Q Consensus 629 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 707 (767)
............++..|+|||.+.+..++.++|||||||++|||++ |..||...... .+..+. ..+.
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~~~----~~~~----- 228 (279)
T cd05109 161 IDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR---EIPDLL----EKGE----- 228 (279)
T ss_pred cccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHH----HCCC-----
Confidence 3222111222345678999999998899999999999999999998 89998544321 122211 1111
Q ss_pred cccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhh
Q 042216 708 DPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQLL 755 (767)
Q Consensus 708 d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~~ 755 (767)
....+..++.++.+++.+||+.||++||++.++++.|+.+.+..
T Consensus 229 ----~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 229 ----RLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred ----cCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 11123345678899999999999999999999999998876655
No 80
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2.6e-37 Score=334.91 Aligned_cols=242 Identities=25% Similarity=0.317 Sum_probs=199.7
Q ss_pred eeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCC
Q 042216 482 IIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGT 558 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gs 558 (767)
+||+|+||.||++.....++.||+|++... .......+.+|+++++.++||||+++.+++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~ 81 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGE 81 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCC
Confidence 699999999999999888899999998754 23345578899999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcccccc
Q 042216 559 LRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQ 638 (767)
Q Consensus 559 L~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~ 638 (767)
|.+++... ..+++.++..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++..... ......
T Consensus 82 L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~--~~~~~~ 154 (328)
T cd05593 82 LFFHLSRE--RVFSEDRTRFYGAEIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD--AATMKT 154 (328)
T ss_pred HHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc--cccccc
Confidence 99988543 45899999999999999999999 788999999999999999999999999998753221 112234
Q ss_pred ccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChh
Q 042216 639 VKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPV 718 (767)
Q Consensus 639 ~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 718 (767)
..||+.|+|||++.+..++.++|||||||++|||++|+.||......+. .... ..+ ....+..
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~------~~~~-~~~----------~~~~p~~ 217 (328)
T cd05593 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL------FELI-LME----------DIKFPRT 217 (328)
T ss_pred ccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHH------HHHh-ccC----------CccCCCC
Confidence 5699999999999988999999999999999999999999965432211 1111 000 0122344
Q ss_pred hHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 042216 719 CLNQFVEVAMSCVNDDRIRRP-----SMSDVVWG 747 (767)
Q Consensus 719 ~~~~l~~li~~Cl~~dp~~RP-----s~~evl~~ 747 (767)
.+.++.+++.+||+.||.+|| ++.|+++.
T Consensus 218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 218 LSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 567789999999999999997 88998753
No 81
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.4e-37 Score=328.71 Aligned_cols=253 Identities=22% Similarity=0.300 Sum_probs=206.8
Q ss_pred HhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEE
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMIL 549 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~l 549 (767)
..++|+.+..||+|+||.||+++.++++..+|+|++++.. ..+..-...|-.+|....+|.||+|+-.+.+.+.+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 3568999999999999999999999999999999998763 3344457889999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCC
Q 042216 550 VYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPN 629 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~ 629 (767)
||||++||++..+|.+. ..|++......+.+++.|+.-|| ..++|||||||+|+|||..|++||+||||+.-...
T Consensus 219 iMEylPGGD~mTLL~~~--~~L~e~~arfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~ 293 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRK--DTLTEDWARFYIAETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDK 293 (550)
T ss_pred EEEecCCccHHHHHHhc--CcCchHHHHHHHHHHHHHHHHHH---HcCcccccCChhheeecCCCCEeeccccccchhhh
Confidence 99999999999999655 45899999999999999999999 88899999999999999999999999999842100
Q ss_pred ----------------C------CCc----cc-------------------cccccCCCcccChhhhccCCCCchhhHHH
Q 042216 630 ----------------F------SKT----HV-------------------STQVKGSIGYLDPEYYRLQLLTEKSDVYS 664 (767)
Q Consensus 630 ----------------~------~~~----~~-------------------~~~~~gt~~y~aPE~~~~~~~s~ksDV~S 664 (767)
. ... .. ....+|||.|||||++.+..|+..+|.||
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS 373 (550)
T KOG0605|consen 294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS 373 (550)
T ss_pred hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence 0 000 00 01235999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCCCccc-hhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCC---
Q 042216 665 FGVVLLEVLCARPPILRTGDKKQ-VNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPS--- 740 (767)
Q Consensus 665 fGvvl~elltg~~P~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs--- 740 (767)
+|||+||||.|-+||......+. ..+..|... +..+....+..+..+||.+|+. ||++|.-
T Consensus 374 LG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~--------------l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G 438 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCSETPQETYRKIVNWRET--------------LKFPEEVDLSDEAKDLITRLLC-DPENRLGSKG 438 (550)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhh--------------ccCCCcCcccHHHHHHHHHHhc-CHHHhcCccc
Confidence 99999999999999977665432 334444332 2222233445788999999999 9999975
Q ss_pred HHHHH
Q 042216 741 MSDVV 745 (767)
Q Consensus 741 ~~evl 745 (767)
++||-
T Consensus 439 ~~EIK 443 (550)
T KOG0605|consen 439 AEEIK 443 (550)
T ss_pred HHHHh
Confidence 45543
No 82
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.3e-36 Score=319.50 Aligned_cols=258 Identities=28% Similarity=0.475 Sum_probs=207.2
Q ss_pred hhccccceeeeccCcEEEEEEEecCCC---ceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEE
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDS---TPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMIL 549 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~---~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~l 549 (767)
.++|+..+.||+|+||.||+|.+..++ ..+|+|.+.... ....+++.+|++++.+++|+|++++.+++...+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 356788889999999999999986543 379999987553 3345678999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCC
Q 042216 550 VYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPN 629 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~ 629 (767)
||||+++++|.+++..+. ..+++.++..++.|++.||+||| +.+++|+||||+||++++++.+||+|||++.....
T Consensus 84 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 84 ITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLS---DMNYVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred EEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 999999999999996543 46899999999999999999999 77899999999999999999999999999875432
Q ss_pred CCCcc-ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccc
Q 042216 630 FSKTH-VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDII 707 (767)
Q Consensus 630 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 707 (767)
..... .......+..|+|||++....++.++|||||||++|||++ |+.||......+ +.... ..+
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~------~~~~i-~~~------ 226 (268)
T cd05063 160 DPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE------VMKAI-NDG------ 226 (268)
T ss_pred ccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH------HHHHH-hcC------
Confidence 21111 1111223467999999998899999999999999999997 999985443211 11111 111
Q ss_pred cccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 042216 708 DPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFV 751 (767)
Q Consensus 708 d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~ 751 (767)
.....+..++.++.+++.+||+.+|.+||++.+|++.|+++
T Consensus 227 ---~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 227 ---FRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred ---CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11122334567889999999999999999999999999876
No 83
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.2e-36 Score=320.36 Aligned_cols=255 Identities=27% Similarity=0.404 Sum_probs=200.4
Q ss_pred ccceeeeccCcEEEEEEEecCCCc--eEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeecC------Cce
Q 042216 478 NNLLIIGRGGFGNVYKGFLNGDST--PVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDD------GQM 547 (767)
Q Consensus 478 ~~~~~LG~G~fG~Vy~g~~~~~~~--~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~------~~~ 547 (767)
...+.||+|+||.||+|+....+. .+|+|.++.. .......+.+|+++++.++|+||++++++|... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 345689999999999999876554 5899988654 234456789999999999999999999988532 256
Q ss_pred EEEEecCCCCChhhhhccC----CCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCC
Q 042216 548 ILVYDYMARGTLRDHLYNN----DNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGL 623 (767)
Q Consensus 548 ~lV~ey~~~gsL~~~L~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGl 623 (767)
++++||+++|+|.+++... ....+++..+..++.|++.||.||| +++|+||||||+|||+++++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCCCc
Confidence 8999999999999987432 2345899999999999999999999 78899999999999999999999999999
Q ss_pred cccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCC
Q 042216 624 CKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGK 702 (767)
Q Consensus 624 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~ 702 (767)
++...............++..|+|||++....++.++|||||||++|||++ |+.||...... .+. .....+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~----~~~~~~~ 231 (272)
T cd05075 159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS---EIY----DYLRQGN 231 (272)
T ss_pred ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH---HHH----HHHHcCC
Confidence 886433221111223346678999999999999999999999999999999 88888543321 111 1112211
Q ss_pred ccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 042216 703 IGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFV 751 (767)
Q Consensus 703 ~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~ 751 (767)
.. ..+..++..+.+++.+||+.+|++|||+.+|++.|+.+
T Consensus 232 ~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 232 RL---------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CC---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11 12334567789999999999999999999999999875
No 84
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=5.3e-37 Score=325.12 Aligned_cols=256 Identities=25% Similarity=0.384 Sum_probs=204.3
Q ss_pred ccccceeeeccCcEEEEEEEecCC-----CceEEEEEeCCCCCcc-hhHHHHHHHHHhccccceeeeEeeeeecCCceEE
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGD-----STPVAIKRLNPGSQQG-ALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMIL 549 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~-----~~~vAVK~l~~~~~~~-~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~l 549 (767)
+|...+.||+|+||.||+|...+. ++.||+|+++...... ...+.+|+.++..++||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 456667899999999999987532 4689999997554332 3568899999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccC--------------CCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCc
Q 042216 550 VYDYMARGTLRDHLYNN--------------DNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWV 615 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~--------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~ 615 (767)
++||+++++|.+++... ....+++..+..++.|++.||.||| +.+|+||||||+|||+++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS---SHHVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HcCccccccchhheEecCCCc
Confidence 99999999999998421 1235889999999999999999999 788999999999999999999
Q ss_pred EEEeecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHH
Q 042216 616 AKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWA 694 (767)
Q Consensus 616 ~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~ 694 (767)
+||+|||+++...............+++.|+|||.+..+.++.++|||||||++|||++ |..||...... ...
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~---~~~--- 236 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ---DVI--- 236 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH---HHH---
Confidence 99999999875433222222233446788999999988889999999999999999998 88888544321 111
Q ss_pred HHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 042216 695 TECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEF 750 (767)
Q Consensus 695 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~ 750 (767)
.. ...+. ....+..++..+.+++..||+.+|.+||++.+|+..|+.
T Consensus 237 ~~-i~~~~---------~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 237 EM-IRNRQ---------VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HH-HHcCC---------cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 11 11111 112345577789999999999999999999999999874
No 85
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.1e-36 Score=320.33 Aligned_cols=256 Identities=26% Similarity=0.425 Sum_probs=202.9
Q ss_pred cccceeeeccCcEEEEEEEecCCC---ceEEEEEeCCCC--CcchhHHHHHHHHHhccccceeeeEeeeeecCCc-----
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDS---TPVAIKRLNPGS--QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQ----- 546 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~---~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~----- 546 (767)
|...+.||+|+||.||+|++..+. ..||+|+++... .....++.+|++.++.++|||++++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 455678999999999999986433 679999987542 2334578999999999999999999999876554
Q ss_pred -eEEEEecCCCCChhhhhccC----CCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeec
Q 042216 547 -MILVYDYMARGTLRDHLYNN----DNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDF 621 (767)
Q Consensus 547 -~~lV~ey~~~gsL~~~L~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~Df 621 (767)
.++++||+++|+|..++... ....+++..+..++.|++.||.||| +.+++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchheEEECCCCeEEECCc
Confidence 79999999999999988542 2346899999999999999999999 778999999999999999999999999
Q ss_pred CCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhc
Q 042216 622 GLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRN 700 (767)
Q Consensus 622 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~ 700 (767)
|+++...............++..|+|||.+....++.++|||||||++|||++ |..||...... .+..+. ..
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~---~~~~~~----~~ 230 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH---EIYDYL----RH 230 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHH----Hc
Confidence 99885433221111222335678999999988899999999999999999999 88888543321 111111 11
Q ss_pred CCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 042216 701 GKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFV 751 (767)
Q Consensus 701 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~ 751 (767)
+. ....+..++.++.+++.+||+.||.+||++.||++.|+.+
T Consensus 231 ~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 231 GN---------RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CC---------CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11 1122445677899999999999999999999999999875
No 86
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=4.4e-37 Score=325.92 Aligned_cols=264 Identities=28% Similarity=0.418 Sum_probs=204.2
Q ss_pred hccccceeeeccCcEEEEEEEec----CCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeec--CCceE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLN----GDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCND--DGQMI 548 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~----~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~--~~~~~ 548 (767)
++|...+.||+|+||.||++..+ ..+..||+|++........+.+.+|++++++++||||+++++++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 46777889999999999999853 3457899999977666666789999999999999999999998754 34689
Q ss_pred EEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCC
Q 042216 549 LVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGP 628 (767)
Q Consensus 549 lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~ 628 (767)
+|+||+++|+|.+++.+.. ..+++..+..++.|++.||.||| ..+++||||||+||++++++.+||+|||+++...
T Consensus 84 lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred EEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 9999999999999996543 35899999999999999999999 7889999999999999999999999999998653
Q ss_pred CCCCcc-ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCcc--------c-hhHHHHHHHHh
Q 042216 629 NFSKTH-VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKK--------Q-VNLAVWATECY 698 (767)
Q Consensus 629 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~--------~-~~l~~~~~~~~ 698 (767)
...... ......++..|+|||++.+..++.++|||||||+++||++|..++....... . ..........
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 238 (284)
T cd05081 160 QDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIEL- 238 (284)
T ss_pred CCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHH-
Confidence 322111 1112223456999999998899999999999999999999877653221100 0 0000000011
Q ss_pred hcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 042216 699 RNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFV 751 (767)
Q Consensus 699 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~ 751 (767)
+........+..++.++.+++.+||+.+|++|||+.||++.|+.+
T Consensus 239 --------~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 239 --------LKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred --------HhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 111111122345667899999999999999999999999999865
No 87
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=6.1e-37 Score=327.31 Aligned_cols=259 Identities=26% Similarity=0.441 Sum_probs=207.1
Q ss_pred hccccceeeeccCcEEEEEEEecCCCc--eEEEEEeCCC-CCcchhHHHHHHHHHhcc-ccceeeeEeeeeecCCceEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDST--PVAIKRLNPG-SQQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDGQMILV 550 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~--~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~lV 550 (767)
++|+..++||+|+||.||+|..++++. .+++|.++.. .....+.+.+|++++.++ +||||+++++++...+..+++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 467888899999999999999876543 4788888743 333456789999999999 799999999999999999999
Q ss_pred EecCCCCChhhhhccCC--------------CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcE
Q 042216 551 YDYMARGTLRDHLYNND--------------NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVA 616 (767)
Q Consensus 551 ~ey~~~gsL~~~L~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ 616 (767)
+||+++|+|.+++.+.. ...+++.++..++.|++.||+||| +.+++||||||+|||+++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS---EKQFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCcCCcceEEECCCCeE
Confidence 99999999999996532 135889999999999999999999 7889999999999999999999
Q ss_pred EEeecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHH
Q 042216 617 KVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWAT 695 (767)
Q Consensus 617 ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~ 695 (767)
||+|||++...... ........+..|+|||++....++.++|||||||++|||++ |+.||......+ + ..
T Consensus 159 kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~---~---~~ 229 (297)
T cd05089 159 KIADFGLSRGEEVY---VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE---L---YE 229 (297)
T ss_pred EECCcCCCccccce---eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---H---HH
Confidence 99999998642211 11111223567999999998899999999999999999997 999995543211 1 11
Q ss_pred HHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhh
Q 042216 696 ECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQLL 755 (767)
Q Consensus 696 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~~ 755 (767)
. ... ......+..++..+.+++.+||+.+|.+||+++++++.|+.+++..
T Consensus 230 ~-~~~---------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 230 K-LPQ---------GYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred H-Hhc---------CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 1 111 1111223446678999999999999999999999999999888655
No 88
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=7.2e-37 Score=323.84 Aligned_cols=256 Identities=27% Similarity=0.463 Sum_probs=206.1
Q ss_pred hccccceeeeccCcEEEEEEEec-----CCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLN-----GDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMIL 549 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~-----~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~l 549 (767)
.++...+.||+|+||.||++... ..+..+|+|.+..........+.+|+++++.++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 45667778999999999999753 2346799999876666667789999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCC-------------CCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcE
Q 042216 550 VYDYMARGTLRDHLYNNDN-------------PPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVA 616 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~~~-------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ 616 (767)
++||+++|+|.+++..... ..+++.+++.++.|++.||+||| +.+++|+||||+|||+++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA---SLHFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH---HCCeecccccHhhEEEcCCCCE
Confidence 9999999999999865321 35899999999999999999999 7889999999999999999999
Q ss_pred EEeecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHH
Q 042216 617 KVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWAT 695 (767)
Q Consensus 617 ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~ 695 (767)
||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |++||......+. ..
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~---~~--- 235 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA---IE--- 235 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH---HH---
Confidence 9999999875432211111223335678999999999999999999999999999998 8999854433211 11
Q ss_pred HHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 042216 696 ECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLE 749 (767)
Q Consensus 696 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~ 749 (767)
....+. ....+..++..+.+++.+||+.||.+||++.||++.|+
T Consensus 236 -~~~~~~---------~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 236 -CITQGR---------ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred -HHHcCc---------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 111111 11223345677899999999999999999999999886
No 89
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=3.6e-37 Score=335.11 Aligned_cols=266 Identities=23% Similarity=0.286 Sum_probs=198.3
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeecC-----CceE
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDD-----GQMI 548 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~-----~~~~ 548 (767)
+|+..+.||+|+||.||+|....+++.||||++... .......+.+|++++++++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 467788999999999999999888899999998643 223345688999999999999999999988543 2579
Q ss_pred EEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCC
Q 042216 549 LVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGP 628 (767)
Q Consensus 549 lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~ 628 (767)
+||||+. ++|.+++... ..+++..+..++.|+++||.||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 81 lv~e~~~-~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 81 VVFELME-SDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEecCC-CCHHHHHHhc--ccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccCccccccc
Confidence 9999996 6899988543 35899999999999999999999 7889999999999999999999999999987532
Q ss_pred CCCCc-cccccccCCCcccChhhhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHH--------HHH
Q 042216 629 NFSKT-HVSTQVKGSIGYLDPEYYRL--QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWA--------TEC 697 (767)
Q Consensus 629 ~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~--------~~~ 697 (767)
..... .......|+..|+|||++.. ..++.++|||||||++|||++|++||............... ...
T Consensus 155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (338)
T cd07859 155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISR 234 (338)
T ss_pred cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 21111 11234568999999999875 67899999999999999999999999654332111110000 000
Q ss_pred hhcCCccccccc---cccC---CCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 698 YRNGKIGDIIDP---FLKG---NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 698 ~~~~~~~~~~d~---~l~~---~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
+......+.++. .... ...+.....+.+++.+||+.||++|||++|+++.
T Consensus 235 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 235 VRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred hhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 000000000000 0000 0011234567899999999999999999999954
No 90
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.2e-36 Score=317.60 Aligned_cols=252 Identities=29% Similarity=0.460 Sum_probs=202.8
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
++|...+.||+|+||.||+|...+. ..+|+|.+.... ....+|.+|+.++.+++||||+++++++.+.+..+++|||+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~-~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQ-YDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYM 81 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCC-CcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcC
Confidence 4577778999999999999988653 569999887443 33467999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
++|+|.+++..... .+++.+++.++.|++.||.||| +.+++|+||||+|||+++++.+||+|||+++....... .
T Consensus 82 ~~~~l~~~i~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~-~ 156 (256)
T cd05113 82 SNGCLLNYLREHGK-RFQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY-T 156 (256)
T ss_pred CCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCCccceecCCCce-e
Confidence 99999999965433 6899999999999999999999 78899999999999999999999999999875432211 1
Q ss_pred ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccC
Q 042216 635 VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKG 713 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 713 (767)
......++..|+|||.+.+..++.++|||||||++|||++ |+.||......+ ... . ...+. +.
T Consensus 157 ~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~---~~~---~-~~~~~---------~~ 220 (256)
T cd05113 157 SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE---TVE---K-VSQGL---------RL 220 (256)
T ss_pred ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH---HHH---H-HhcCC---------CC
Confidence 1122335678999999998889999999999999999998 999986443221 111 1 11111 11
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 042216 714 NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLE 749 (767)
Q Consensus 714 ~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~ 749 (767)
..+...+..+.+++.+||+.+|.+||++.+|++.|+
T Consensus 221 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 221 YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 112234578899999999999999999999998774
No 91
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=5.5e-37 Score=349.03 Aligned_cols=258 Identities=27% Similarity=0.375 Sum_probs=208.5
Q ss_pred HHHhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeecCC---
Q 042216 471 KEATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDG--- 545 (767)
Q Consensus 471 ~~~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~--- 545 (767)
....++|...+.||+|+||+||++....+++.||||++... .......+.+|+..+..++|+|++++...+...+
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 34457899999999999999999999888899999998654 2344556889999999999999999988764332
Q ss_pred -----ceEEEEecCCCCChhhhhccC--CCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEE
Q 042216 546 -----QMILVYDYMARGTLRDHLYNN--DNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKV 618 (767)
Q Consensus 546 -----~~~lV~ey~~~gsL~~~L~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki 618 (767)
.+++||||+++|+|.++|... ....+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH---~~~IiHrDLKP~NILl~~~~~vkL 184 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVH---SKHMIHRDIKSANILLCSNGLVKL 184 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEeCCCCEEE
Confidence 368999999999999998643 2356899999999999999999999 788999999999999999999999
Q ss_pred eecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHh
Q 042216 619 SDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECY 698 (767)
Q Consensus 619 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~ 698 (767)
+|||+++...............||+.|+|||++.+..++.++|||||||++|||++|+.||...... ......
T Consensus 185 ~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~------~~~~~~- 257 (496)
T PTZ00283 185 GDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENME------EVMHKT- 257 (496)
T ss_pred EecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH------HHHHHH-
Confidence 9999998654322223334567999999999999999999999999999999999999999643221 111111
Q ss_pred hcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 699 RNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 699 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
..+. ....+...+.++.+++.+||+.||.+||++.+++..
T Consensus 258 ~~~~---------~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 258 LAGR---------YDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred hcCC---------CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1111 112344566789999999999999999999999863
No 92
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.7e-37 Score=309.75 Aligned_cols=265 Identities=21% Similarity=0.268 Sum_probs=208.6
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcc--hhHHHHHHHHHhccccceeeeEeeeeecC--CceEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQG--ALEFQTEIGMLSQLRYLHLVSLIGYCNDD--GQMILV 550 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~--~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~--~~~~lV 550 (767)
++|+.++.|++|+||.||+|+.+.++..||+|+++...+.. ...-.+||.+|.+++|||||.+-.+.... +..|||
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 45788889999999999999999999999999998654322 23458999999999999999998887543 579999
Q ss_pred EecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCC
Q 042216 551 YDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNF 630 (767)
Q Consensus 551 ~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~ 630 (767)
||||++ +|...+..-. +++...+...++.|+++|++||| .+.|+|||||++|+|+...|.+||+||||||.....
T Consensus 156 Me~~Eh-DLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred HHHHHh-hHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHh---hceeEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 999998 9998886544 57889999999999999999999 677999999999999999999999999999976543
Q ss_pred CCccccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccc---
Q 042216 631 SKTHVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDI--- 706 (767)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~--- 706 (767)
....+..+-|..|.|||.+.+ ..|+...|+||+|||+.||+++++-|.+..+..+.+.+-.......+.....+
T Consensus 231 --~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~l 308 (419)
T KOG0663|consen 231 --LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSEL 308 (419)
T ss_pred --cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcccc
Confidence 223566778999999999875 57999999999999999999999999887776555443322211111111111
Q ss_pred --c---------cccccCCCChh-hHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 707 --I---------DPFLKGNAPPV-CLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 707 --~---------d~~l~~~~~~~-~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
+ -..++..++.. ..+.-.+++...+..||.+|-|++|.++
T Consensus 309 p~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 309 PAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred chhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 0 01112222222 3466788999999999999999999874
No 93
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=8.9e-37 Score=322.14 Aligned_cols=257 Identities=26% Similarity=0.453 Sum_probs=207.4
Q ss_pred hhccccceeeeccCcEEEEEEEecCC-----CceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecCCce
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGD-----STPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQM 547 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~-----~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~ 547 (767)
.++|...+.||+|+||.||+|...+. +..||+|.+.... .....++.+|+.++..++|+||+++++++......
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 35788888999999999999988643 3689999986543 23345788999999999999999999999999999
Q ss_pred EEEEecCCCCChhhhhccCC--------CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEe
Q 042216 548 ILVYDYMARGTLRDHLYNND--------NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVS 619 (767)
Q Consensus 548 ~lV~ey~~~gsL~~~L~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~ 619 (767)
++||||+++|+|.+++.... ...++|..++.++.|++.||.||| +.+++||||||+|||+++++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccChheEEEcCCCCEEEC
Confidence 99999999999999986432 234789999999999999999999 7889999999999999999999999
Q ss_pred ecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHh
Q 042216 620 DFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECY 698 (767)
Q Consensus 620 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~ 698 (767)
|||+++...............++..|+|||.+..+.++.++|||||||++|||++ |+.||......+ ...+.
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~~~~~---- 234 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE---VLKFV---- 234 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH---HHHHH----
Confidence 9999875433222122233446789999999998899999999999999999998 999985443221 11111
Q ss_pred hcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 042216 699 RNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLE 749 (767)
Q Consensus 699 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~ 749 (767)
..+. ....+..++.++.+++.+||+.+|.+|||+.++++.|+
T Consensus 235 ~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 235 IDGG---------HLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred hcCC---------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 1111 11223445778999999999999999999999999886
No 94
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8.3e-37 Score=327.86 Aligned_cols=262 Identities=26% Similarity=0.436 Sum_probs=209.3
Q ss_pred hccccceeeeccCcEEEEEEEecCC-------CceEEEEEeCCCC-CcchhHHHHHHHHHhcc-ccceeeeEeeeeecCC
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGD-------STPVAIKRLNPGS-QQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDG 545 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~-------~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~ 545 (767)
++|...+.||+|+||.||++...+. ...+|+|.+.... .....++.+|++++.++ +||||++++++|...+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 5688888999999999999986431 2469999987542 33456788999999999 7999999999999999
Q ss_pred ceEEEEecCCCCChhhhhccCC--------------CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEEC
Q 042216 546 QMILVYDYMARGTLRDHLYNND--------------NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLD 611 (767)
Q Consensus 546 ~~~lV~ey~~~gsL~~~L~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld 611 (767)
..++||||+++|+|.+++.... ...++|.++++++.|++.||+||| +.+++||||||+|||++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill~ 174 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVT 174 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHHheEEc
Confidence 9999999999999999996532 135899999999999999999999 78899999999999999
Q ss_pred CCCcEEEeecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhH
Q 042216 612 EEWVAKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNL 690 (767)
Q Consensus 612 ~~~~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l 690 (767)
+++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |+.||......
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~----- 249 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE----- 249 (307)
T ss_pred CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHH-----
Confidence 999999999999875432211111222234568999999998899999999999999999998 88888543321
Q ss_pred HHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhh
Q 042216 691 AVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQLL 755 (767)
Q Consensus 691 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~~ 755 (767)
.... ....+ .....+..++.++.+++.+||+.+|.+||++.+|++.|+.+++..
T Consensus 250 -~~~~-~~~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~ 303 (307)
T cd05098 250 -ELFK-LLKEG---------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALT 303 (307)
T ss_pred -HHHH-HHHcC---------CCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHh
Confidence 1111 11111 111234456678999999999999999999999999999988764
No 95
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=5.9e-37 Score=332.85 Aligned_cols=261 Identities=23% Similarity=0.355 Sum_probs=203.5
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEe
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~e 552 (767)
.++|+..+.||+|+||.||++....++..+|+|.+.... .....++.+|++++++++|+||++++++|.+++..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 367888999999999999999999888899999887542 2334568999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK 632 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~ 632 (767)
|+++|+|.+++... ..+++..+..++.+++.||.|||+ ..+|+|+||||+|||++.++.+||+|||++.....
T Consensus 84 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~--- 156 (333)
T cd06650 84 HMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--- 156 (333)
T ss_pred cCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhh---
Confidence 99999999999653 358899999999999999999994 34799999999999999999999999999875322
Q ss_pred ccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcc--------
Q 042216 633 THVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIG-------- 704 (767)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~-------- 704 (767)
.......|+..|+|||++.+..++.++|||||||++|||++|+.||........ ..... ....+...
T Consensus 157 -~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~ 231 (333)
T cd06650 157 -SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKEL---ELMFG-CPVEGDPAESETSPRP 231 (333)
T ss_pred -hccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHH---HHHhc-CcccCCccccccCccc
Confidence 112334688999999999988999999999999999999999999864332111 00000 00000000
Q ss_pred ---------------------ccccccccCCC---C-hhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 705 ---------------------DIIDPFLKGNA---P-PVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 705 ---------------------~~~d~~l~~~~---~-~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.+.+....... + .....++.+++.+||+.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~ 298 (333)
T cd06650 232 RPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV 298 (333)
T ss_pred CCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence 00000000000 0 113467889999999999999999999974
No 96
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-37 Score=321.79 Aligned_cols=255 Identities=24% Similarity=0.331 Sum_probs=203.3
Q ss_pred HHhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC--------------cchhHHHHHHHHHhccccceeeeE
Q 042216 472 EATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ--------------QGALEFQTEIGMLSQLRYLHLVSL 537 (767)
Q Consensus 472 ~~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~--------------~~~~~f~~Ei~~l~~l~Hpniv~l 537 (767)
...++|.....||+|.||.|-+|....+++.||||++.+... ...+...+||.+|++++|||||+|
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 345778888899999999999999999999999999865310 122468899999999999999999
Q ss_pred eeeeecC--CceEEEEecCCCCChhhhhccCCCCC-CChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCC
Q 042216 538 IGYCNDD--GQMILVYDYMARGTLRDHLYNNDNPP-LPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEW 614 (767)
Q Consensus 538 ~g~~~~~--~~~~lV~ey~~~gsL~~~L~~~~~~~-l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~ 614 (767)
+.+..+. +.+|||+|||..|.+... ...++ |++.+..+++.+++.||.||| .++||||||||+|+||++++
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~---p~d~~els~~~Ar~ylrDvv~GLEYLH---~QgiiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWC---PPDKPELSEQQARKYLRDVVLGLEYLH---YQGIIHRDIKPSNLLLSSDG 247 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccC---CCCcccccHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEEcCCC
Confidence 9998754 689999999999888654 23344 999999999999999999999 88999999999999999999
Q ss_pred cEEEeecCCcccCCCC---CCccccccccCCCcccChhhhccCC----CCchhhHHHHHHHHHHHHhCCCCCCCCCCccc
Q 042216 615 VAKVSDFGLCKFGPNF---SKTHVSTQVKGSIGYLDPEYYRLQL----LTEKSDVYSFGVVLLEVLCARPPILRTGDKKQ 687 (767)
Q Consensus 615 ~~ki~DfGla~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~~~----~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~ 687 (767)
++||+|||.+...+.. ..........||+.|||||...++. .+.+.||||+||+||.|+.|+.||.+....+
T Consensus 248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~- 326 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELE- 326 (576)
T ss_pred cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHH-
Confidence 9999999998754221 1112223467999999999988643 3467899999999999999999996543311
Q ss_pred hhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 688 VNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 688 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
+ ..+++...|.-...++..+++.+|++++|++||++|.+..+|...
T Consensus 327 --l------------~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~H 372 (576)
T KOG0585|consen 327 --L------------FDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLH 372 (576)
T ss_pred --H------------HHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheec
Confidence 1 112233333333334567889999999999999999999998643
No 97
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=6.1e-37 Score=335.58 Aligned_cols=248 Identities=21% Similarity=0.313 Sum_probs=195.5
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC-cchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ-QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
+|+..+.||+|+||.||+|+...+++.||||++..... .....+.+|+++++.++|+||+++++++.+.+..++||||+
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 154 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM 154 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence 34556689999999999999988889999999865432 33456899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
++|+|.+.. .+++..+..++.|++.||.||| +.+|+||||||+|||+++++.+||+|||+++...... .
T Consensus 155 ~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~--~ 223 (353)
T PLN00034 155 DGGSLEGTH------IADEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM--D 223 (353)
T ss_pred CCCcccccc------cCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEcccccceeccccc--c
Confidence 999987543 3567788899999999999999 7889999999999999999999999999987643211 1
Q ss_pred ccccccCCCcccChhhhcc-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccc
Q 042216 635 VSTQVKGSIGYLDPEYYRL-----QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDP 709 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~-----~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 709 (767)
......||..|+|||++.. ...+.++|||||||++|||++|+.||......+...+. ... ...
T Consensus 224 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~---~~~-~~~-------- 291 (353)
T PLN00034 224 PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLM---CAI-CMS-------- 291 (353)
T ss_pred cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHH---HHH-hcc--------
Confidence 1234568999999998753 23456899999999999999999999633221111111 100 000
Q ss_pred cccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 710 FLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 710 ~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
.....+..+..++.+++.+||+.||++||++.|+++.
T Consensus 292 -~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 292 -QPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred -CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0112234456789999999999999999999999864
No 98
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7e-38 Score=301.29 Aligned_cols=248 Identities=27% Similarity=0.390 Sum_probs=213.1
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
++|+..+.||+|-||.||.|..+.+.-.||+|++.+. ..+-.+++.+|+++-+.|+||||+++++++.+....||++
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil 101 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL 101 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence 4688899999999999999999988899999998654 2334567899999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
||..+|+|...|.......+++.....+..|+|.||.|+| .+.+|||||||+|+|++..+..||+|||-+-..+
T Consensus 102 Eya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p--- 175 (281)
T KOG0580|consen 102 EYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP--- 175 (281)
T ss_pred EecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCCceeecC---
Confidence 9999999999998777777999999999999999999999 8889999999999999999999999999986532
Q ss_pred CccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccc
Q 042216 632 KTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFL 711 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 711 (767)
.......+||..|+|||...+...+...|+|++|++.||++.|.+||......+ .... +.+ .
T Consensus 176 -~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~e--tYkr-----I~k----------~ 237 (281)
T KOG0580|consen 176 -SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSE--TYKR-----IRK----------V 237 (281)
T ss_pred -CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHH--HHHH-----HHH----------c
Confidence 233456789999999999999999999999999999999999999996544221 1110 111 1
Q ss_pred cCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 712 KGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 712 ~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
+-..|...+....++|.+|+..+|.+|.+..|++.
T Consensus 238 ~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 238 DLKFPSTISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred cccCCcccChhHHHHHHHHhccCccccccHHHHhh
Confidence 22345667778899999999999999999999874
No 99
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-37 Score=345.41 Aligned_cols=260 Identities=22% Similarity=0.276 Sum_probs=214.0
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccc-cceeeeEeeee-e---c---CCce
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLR-YLHLVSLIGYC-N---D---DGQM 547 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~-Hpniv~l~g~~-~---~---~~~~ 547 (767)
+..+.+.|.+|||+.||+++..+++..+|+|++-...+...+...+||++|++|+ |+|||.+++.+ . . .-+.
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev 117 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV 117 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence 4566778999999999999998887899999998778888889999999999997 99999999932 1 1 1378
Q ss_pred EEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccC
Q 042216 548 ILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFG 627 (767)
Q Consensus 548 ~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~ 627 (767)
+|+||||++|+|-+++.......|++.++++|+.|+++|+++||. +.++|||||||-+||||+.+++.||||||.+...
T Consensus 118 llLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~ 196 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKLCDFGSATTK 196 (738)
T ss_pred EeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEeCcccccccc
Confidence 999999999999999976555569999999999999999999995 4578999999999999999999999999998642
Q ss_pred CCCCCc-c-c---c--ccccCCCcccChhhh---ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHH
Q 042216 628 PNFSKT-H-V---S--TQVKGSIGYLDPEYY---RLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATEC 697 (767)
Q Consensus 628 ~~~~~~-~-~---~--~~~~gt~~y~aPE~~---~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~ 697 (767)
...... . . . -...-|+.|.|||.+ .+...++|+|||+|||+||-|+....||...+..
T Consensus 197 ~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l------------ 264 (738)
T KOG1989|consen 197 ILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL------------ 264 (738)
T ss_pred cCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce------------
Confidence 111100 0 0 0 012368899999986 4678999999999999999999999999654332
Q ss_pred hhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhh
Q 042216 698 YRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQLL 755 (767)
Q Consensus 698 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~~ 755 (767)
.+++....-+..+..+..|.+||..||+.||.+||++-+|++.+-++....
T Consensus 265 -------aIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 265 -------AILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred -------eEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence 233333444444678999999999999999999999999999998876543
No 100
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.3e-36 Score=325.76 Aligned_cols=263 Identities=24% Similarity=0.441 Sum_probs=210.5
Q ss_pred hhccccceeeeccCcEEEEEEEecC-------CCceEEEEEeCCCC-CcchhHHHHHHHHHhcc-ccceeeeEeeeeecC
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNG-------DSTPVAIKRLNPGS-QQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDD 544 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~-------~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~ 544 (767)
..+|...+.||+|+||.||+++... .+..||+|.+.... .....++.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 4567788899999999999997521 23479999886542 34456789999999999 899999999999999
Q ss_pred CceEEEEecCCCCChhhhhccCC--------------CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEE
Q 042216 545 GQMILVYDYMARGTLRDHLYNND--------------NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILL 610 (767)
Q Consensus 545 ~~~~lV~ey~~~gsL~~~L~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl 610 (767)
...+++|||+++|+|.+++.... ...+++.++..++.|++.||.||| +++++||||||+|||+
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH---HCCeeecccccceEEE
Confidence 99999999999999999996532 235789999999999999999999 7889999999999999
Q ss_pred CCCCcEEEeecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchh
Q 042216 611 DEEWVAKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVN 689 (767)
Q Consensus 611 d~~~~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~ 689 (767)
++++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||......
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---- 246 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---- 246 (304)
T ss_pred cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH----
Confidence 9999999999999986543222222233446678999999998889999999999999999998 78887543221
Q ss_pred HHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhh
Q 042216 690 LAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQLL 755 (767)
Q Consensus 690 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~~ 755 (767)
.+... ...+. ....+..++..+.+++.+||+.+|.+||++.||++.|++++...
T Consensus 247 --~~~~~-~~~~~---------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~ 300 (304)
T cd05101 247 --ELFKL-LKEGH---------RMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLT 300 (304)
T ss_pred --HHHHH-HHcCC---------cCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhh
Confidence 11111 11111 11223456778999999999999999999999999999988664
No 101
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=9.4e-37 Score=323.32 Aligned_cols=269 Identities=24% Similarity=0.368 Sum_probs=205.8
Q ss_pred cccceeeeccCcEEEEEEEe----cCCCceEEEEEeCCCCC-cchhHHHHHHHHHhccccceeeeEeeeeecC--CceEE
Q 042216 477 FNNLLIIGRGGFGNVYKGFL----NGDSTPVAIKRLNPGSQ-QGALEFQTEIGMLSQLRYLHLVSLIGYCNDD--GQMIL 549 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~----~~~~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~--~~~~l 549 (767)
+...+.||+|+||+||++.. ...+..||+|.+..... .....|.+|+++|++++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 36778999999999988653 33457899999875432 3456788999999999999999999998654 35889
Q ss_pred EEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCC
Q 042216 550 VYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPN 629 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~ 629 (767)
+|||+++|+|.+++... .+++.++..++.|++.||.||| +++++||||||+|||+++++.+||+|||+++....
T Consensus 86 v~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 159 (283)
T cd05080 86 IMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 159 (283)
T ss_pred EecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHH---HCCeeccccChheEEEcCCCcEEEeecccccccCC
Confidence 99999999999999643 4899999999999999999999 78899999999999999999999999999886543
Q ss_pred CCCcc-ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccc
Q 042216 630 FSKTH-VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIID 708 (767)
Q Consensus 630 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 708 (767)
..... ......++..|+|||.+....++.++||||||++++||++|+.|+....... ...............+.+.++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd05080 160 GHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKF-EEMIGPKQGQMTVVRLIELLE 238 (283)
T ss_pred cchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchh-hhhhcccccccchhhhhhhhh
Confidence 22111 1122345667999999998889999999999999999999999985432210 001110000001111122222
Q ss_pred ccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 042216 709 PFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVF 752 (767)
Q Consensus 709 ~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~ 752 (767)
.......+..++.++.+++.+||+.+|++||++++|+++|+.+.
T Consensus 239 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 239 RGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 22333345566788999999999999999999999999998764
No 102
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1e-36 Score=323.52 Aligned_cols=253 Identities=23% Similarity=0.313 Sum_probs=204.8
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEe
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~e 552 (767)
+|+..++||+|+||+||++....+++.||+|++.... ......+.+|++++++++||||+++++.+..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 3677889999999999999998778899999986432 2223457889999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK 632 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~ 632 (767)
|+++|+|.+++.......+++..+..++.|++.||.||| +.+++||||||+||++++++.++|+|||+++......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE- 156 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC-
Confidence 999999999887655556999999999999999999999 7789999999999999999999999999987643211
Q ss_pred ccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccccccc
Q 042216 633 THVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLK 712 (767)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 712 (767)
......|+..|+|||++.+..++.++|||||||++|||++|+.||......... .......... .
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~---~~~~~~~~~~----------~ 221 (285)
T cd05605 157 --TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKR---EEVERRVKED----------Q 221 (285)
T ss_pred --ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHH---HHHHHHhhhc----------c
Confidence 122346899999999999889999999999999999999999999654332111 1111111110 1
Q ss_pred CCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 042216 713 GNAPPVCLNQFVEVAMSCVNDDRIRRP-----SMSDVVWG 747 (767)
Q Consensus 713 ~~~~~~~~~~l~~li~~Cl~~dp~~RP-----s~~evl~~ 747 (767)
...+...+..+.+++.+||+.||.+|| ++.++++.
T Consensus 222 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 222 EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 122344567789999999999999999 78888653
No 103
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.5e-36 Score=316.24 Aligned_cols=251 Identities=27% Similarity=0.417 Sum_probs=207.4
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
+|...+.||+|++|.||+++...+++.|++|.+... ......++.+|++++++++|||++++++++.+.+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 467778999999999999999888899999998643 334566789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+++++|.+++.......+++.+++.++.+++.||.||| +.+++|+||||+||++++++.+||+|||+++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~-- 155 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT-- 155 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc--
Confidence 99999999997765567999999999999999999999 7889999999999999999999999999987543321
Q ss_pred cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccC
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKG 713 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 713 (767)
.......++..|+|||++.+..++.++|+|||||+++||++|+.||....... ... ....+.. .
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~----~~~~~~~---------~ 219 (256)
T cd08529 156 NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA---LIL----KIIRGVF---------P 219 (256)
T ss_pred chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH---HHH----HHHcCCC---------C
Confidence 11233457889999999999999999999999999999999999996543211 111 1111111 1
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 714 NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 714 ~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
..+......+.+++.+||+.+|++||++.++++.
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 220 PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred CCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 1222455678999999999999999999999863
No 104
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=3.4e-37 Score=335.30 Aligned_cols=246 Identities=24% Similarity=0.339 Sum_probs=202.0
Q ss_pred hccccceeeeccCcEEEEEEEecCCC-ceEEEEEeCCC---CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDS-TPVAIKRLNPG---SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILV 550 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~-~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV 550 (767)
++|...+.||+|+||.||+|+++..+ ..||+|++... .......+.+|++++..++||||+++++++.+++..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 46888899999999999999876543 68999998543 223445688999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCC
Q 042216 551 YDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNF 630 (767)
Q Consensus 551 ~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~ 630 (767)
|||+++|+|.+++.+. ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 110 ~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~- 183 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT- 183 (340)
T ss_pred EeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC-
Confidence 9999999999999654 35899999999999999999999 78899999999999999999999999999875432
Q ss_pred CCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccccc
Q 042216 631 SKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPF 710 (767)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 710 (767)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .......+.
T Consensus 184 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~-------~~~~i~~~~-------- 244 (340)
T PTZ00426 184 ----RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL-------IYQKILEGI-------- 244 (340)
T ss_pred ----CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH-------HHHHHhcCC--------
Confidence 1234568999999999998889999999999999999999999996543211 011111111
Q ss_pred ccCCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 042216 711 LKGNAPPVCLNQFVEVAMSCVNDDRIRRP-----SMSDVVWG 747 (767)
Q Consensus 711 l~~~~~~~~~~~l~~li~~Cl~~dp~~RP-----s~~evl~~ 747 (767)
...+...+..+.+++.+|++.||.+|+ +++++++.
T Consensus 245 --~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 245 --IYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred --CCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 112334456788999999999999995 88888753
No 105
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=7.3e-37 Score=327.69 Aligned_cols=261 Identities=27% Similarity=0.470 Sum_probs=207.0
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCc--eEEEEEeCCC-CCcchhHHHHHHHHHhcc-ccceeeeEeeeeecCCceEE
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDST--PVAIKRLNPG-SQQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDGQMIL 549 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~--~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~l 549 (767)
.++|+..+.||+|+||.||+|.+..++. .+++|.+... ......++.+|++++.++ +|+||+++++++.+++..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 3567888899999999999999865544 4678877643 233456788999999999 89999999999999999999
Q ss_pred EEecCCCCChhhhhccCC--------------CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCc
Q 042216 550 VYDYMARGTLRDHLYNND--------------NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWV 615 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~ 615 (767)
|+||+++|+|.+++++.. ...+++.+++.++.|++.||+||| +++++||||||+|||+++++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEecCCCc
Confidence 999999999999996432 235889999999999999999999 788999999999999999999
Q ss_pred EEEeecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHH
Q 042216 616 AKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWA 694 (767)
Q Consensus 616 ~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~ 694 (767)
+||+|||+++..... .......++..|+|||++....++.++|||||||+++||++ |..||......+ ...
T Consensus 163 ~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~-- 234 (303)
T cd05088 163 AKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---LYE-- 234 (303)
T ss_pred EEeCccccCcccchh---hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH---HHH--
Confidence 999999998632111 01112234667999999988889999999999999999998 999986443221 111
Q ss_pred HHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhhh
Q 042216 695 TECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQLLR 756 (767)
Q Consensus 695 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~~~ 756 (767)
. ...+ .....+...+..+.+++.+||+.+|++||++.+++++|+.+++.-.
T Consensus 235 -~-~~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~ 285 (303)
T cd05088 235 -K-LPQG---------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 285 (303)
T ss_pred -H-HhcC---------CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence 1 1111 1111223355678999999999999999999999999998876553
No 106
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.3e-36 Score=321.58 Aligned_cols=261 Identities=22% Similarity=0.353 Sum_probs=209.1
Q ss_pred hhccccceeeeccCcEEEEEEEecC----CCceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeec-CCce
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNG----DSTPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCND-DGQM 547 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~----~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~-~~~~ 547 (767)
.++|...++||+|+||.||+|...+ .+..|++|++.... ......+.+|+.++++++|+|++++++++.. ....
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4678888899999999999999875 24789999887542 3335568899999999999999999999876 4678
Q ss_pred EEEEecCCCCChhhhhccCCC------CCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeec
Q 042216 548 ILVYDYMARGTLRDHLYNNDN------PPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDF 621 (767)
Q Consensus 548 ~lV~ey~~~gsL~~~L~~~~~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~Df 621 (767)
++++||+++|+|.+++..... ..+++.+++.++.|++.||+||| +.+++|+||||+||++++++.+||+||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCHhhEEEcCCCcEEECCC
Confidence 999999999999999865322 46899999999999999999999 788999999999999999999999999
Q ss_pred CCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhc
Q 042216 622 GLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRN 700 (767)
Q Consensus 622 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~ 700 (767)
|+++...............++..|+|||++....++.++|||||||++||+++ |+.||...... .+..+.. .
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~~~~~----~ 234 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF---EMAAYLK----D 234 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH---HHHHHHH----c
Confidence 99975432221112223346778999999998899999999999999999998 99999654321 1221111 1
Q ss_pred CCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 042216 701 GKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQ 753 (767)
Q Consensus 701 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~ 753 (767)
+ .....+..++.++.+++.+||+.||++|||+.++++.|+.+.+
T Consensus 235 ~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 235 G---------YRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred C---------CCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 1 1111223456788999999999999999999999999998865
No 107
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.5e-36 Score=323.66 Aligned_cols=263 Identities=27% Similarity=0.429 Sum_probs=207.9
Q ss_pred hccccceeeeccCcEEEEEEEecCCC----------------ceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDS----------------TPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSL 537 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~----------------~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l 537 (767)
.+|+..+.||+|+||.||+++....+ ..||+|.+.... .....++.+|++++++++|||++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 84 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL 84 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 56788889999999999999875432 468999987553 3345678999999999999999999
Q ss_pred eeeeecCCceEEEEecCCCCChhhhhccCC---------CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCe
Q 042216 538 IGYCNDDGQMILVYDYMARGTLRDHLYNND---------NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNI 608 (767)
Q Consensus 538 ~g~~~~~~~~~lV~ey~~~gsL~~~L~~~~---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NI 608 (767)
++++..++..++++||+++++|.+++.+.. ...+++..++.++.|++.||.||| +.+++|+||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH---~~~i~H~dlkp~Ni 161 (296)
T cd05051 85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE---SLNFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH---HcCccccccchhce
Confidence 999999999999999999999999996543 236899999999999999999999 77899999999999
Q ss_pred EECCCCcEEEeecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCCcc
Q 042216 609 LLDEEWVAKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC--ARPPILRTGDKK 686 (767)
Q Consensus 609 Lld~~~~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt--g~~P~~~~~~~~ 686 (767)
+++.++.++|+|||+++...............++..|+|||++....++.++|||||||++|||++ +..|+......
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~- 240 (296)
T cd05051 162 LVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ- 240 (296)
T ss_pred eecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH-
Confidence 999999999999999875433222223334456788999999998899999999999999999998 67787544321
Q ss_pred chhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 042216 687 QVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLE 749 (767)
Q Consensus 687 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~ 749 (767)
................ .....+..++.++.+++.+||+.||.+|||+.||++.|+
T Consensus 241 --~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 241 --QVIENAGHFFRDDGRQ------IYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred --HHHHHHHhcccccccc------ccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 1222222221111111 111123345678999999999999999999999999886
No 108
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.6e-36 Score=316.39 Aligned_cols=255 Identities=29% Similarity=0.455 Sum_probs=205.5
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
++|...+.||+|+||.||+|++.++ ..||+|++.... ....+|.+|++++++++|+||+++++++. .+..++||||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM 82 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcC
Confidence 4688888999999999999988755 569999987532 23457899999999999999999999875 45689999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
++|+|.+++.+.....+++..+..++.|++.||.||| +.+++|+||||+||++++++.+||+|||+++....... .
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~-~ 158 (262)
T cd05071 83 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-T 158 (262)
T ss_pred CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccCCceeecccccc-c
Confidence 9999999997655556899999999999999999999 78899999999999999999999999999875432211 1
Q ss_pred ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccC
Q 042216 635 VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKG 713 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 713 (767)
......++..|+|||+..+..++.++|||||||++|||++ |+.||......+.. .....+ ...
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~-------~~~~~~---------~~~ 222 (262)
T cd05071 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-------DQVERG---------YRM 222 (262)
T ss_pred cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHH-------HHHhcC---------CCC
Confidence 1123346678999999998899999999999999999999 88888554322111 111111 011
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 042216 714 NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVF 752 (767)
Q Consensus 714 ~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~ 752 (767)
..+..++..+.+++.+|++.+|.+||++.++++.|+...
T Consensus 223 ~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 223 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred CCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 123446678899999999999999999999999998754
No 109
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.9e-37 Score=330.93 Aligned_cols=252 Identities=25% Similarity=0.380 Sum_probs=217.0
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeecCCc-eEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQ-MILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~-~~lV~ 551 (767)
++|..++++|+|+||.+++.+++.+++.+++|++... +....+...+|+.++++++|||||...+.+.+++. +++||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 4677788999999999999999999899999998654 33444567899999999999999999999999988 99999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
+|++||+|.+.|.+..+..++++.+++++.|++.|+.||| +..|+|||||+.|||++.+..+||+|||+|+......
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED 160 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence 9999999999998777677999999999999999999999 7889999999999999999999999999999765422
Q ss_pred CccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccc
Q 042216 632 KTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFL 711 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 711 (767)
.......||+.||.||.+.+.+|..|+|||||||++|||++-+++|...+.. .|+.-.. +..
T Consensus 161 --~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~---~Li~ki~-------------~~~ 222 (426)
T KOG0589|consen 161 --SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMS---ELILKIN-------------RGL 222 (426)
T ss_pred --hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchH---HHHHHHh-------------hcc
Confidence 2345678999999999999999999999999999999999999999655432 2222111 112
Q ss_pred cCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 712 KGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 712 ~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
....+...+.++..++..|++.+|..||++.+++.+
T Consensus 223 ~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 223 YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 334566788899999999999999999999999987
No 110
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=2.1e-36 Score=315.78 Aligned_cols=251 Identities=29% Similarity=0.469 Sum_probs=202.2
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
.+|...+.||+|+||.||+|..+. +..+|+|.+.... ....++.+|++++++++|+||+++++++...+..++|+||+
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~-~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRG-KIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYM 81 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecC-CccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecC
Confidence 356777889999999999998864 4679999986432 23457889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
++++|.+++.... ..+++..++.++.|++.||+||| +.+++||||||+||++++++.+||+|||+++...... ..
T Consensus 82 ~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~-~~ 156 (256)
T cd05059 82 ANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQ-YT 156 (256)
T ss_pred CCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCcccceeccccc-cc
Confidence 9999999997543 36899999999999999999999 7789999999999999999999999999987543211 11
Q ss_pred ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccC
Q 042216 635 VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKG 713 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 713 (767)
......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ ... . ...+ ...
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~---~-~~~~---------~~~ 220 (256)
T cd05059 157 SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE---VVE---S-VSAG---------YRL 220 (256)
T ss_pred ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH---HHH---H-HHcC---------CcC
Confidence 1112224567999999998999999999999999999999 899986543321 111 1 1111 111
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 042216 714 NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGL 748 (767)
Q Consensus 714 ~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L 748 (767)
..+..++.++.+++.+||+.+|++|||+.|+++.|
T Consensus 221 ~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 221 YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 22344677899999999999999999999999886
No 111
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.4e-36 Score=324.15 Aligned_cols=263 Identities=25% Similarity=0.402 Sum_probs=204.0
Q ss_pred hccccceeeeccCcEEEEEEEecCC--------------CceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEee
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGD--------------STPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIG 539 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~--------------~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g 539 (767)
++|+..+.||+|+||.||++...+. ...||+|.++... ......|.+|++++++++|+|++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 4678888999999999999987532 2358999987553 333456899999999999999999999
Q ss_pred eeecCCceEEEEecCCCCChhhhhccCC----------CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeE
Q 042216 540 YCNDDGQMILVYDYMARGTLRDHLYNND----------NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNIL 609 (767)
Q Consensus 540 ~~~~~~~~~lV~ey~~~gsL~~~L~~~~----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NIL 609 (767)
++...+..++||||+++++|.+++.... ...+++..++.++.|++.||+||| +.+++|+||||+||+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA---SLNFVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH---hcCeeccccChhhEE
Confidence 9999999999999999999999985432 124789999999999999999999 788999999999999
Q ss_pred ECCCCcEEEeecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCCccc
Q 042216 610 LDEEWVAKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC--ARPPILRTGDKKQ 687 (767)
Q Consensus 610 ld~~~~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt--g~~P~~~~~~~~~ 687 (767)
+++++.+||+|||+++...............++..|+|||++..+.++.++|||||||+++||++ |..||......+
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~- 240 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ- 240 (295)
T ss_pred EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH-
Confidence 99999999999999875432222222223345778999999998899999999999999999988 567775443321
Q ss_pred hhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 042216 688 VNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLE 749 (767)
Q Consensus 688 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~ 749 (767)
............. .......+..++..+.+++.+||+.+|++||+|.+|++.|+
T Consensus 241 --~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 241 --VIENTGEFFRNQG------RQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred --HHHHHHHhhhhcc------ccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 1111111111110 11111223345678999999999999999999999999886
No 112
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.4e-37 Score=332.31 Aligned_cols=246 Identities=22% Similarity=0.297 Sum_probs=207.7
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
+...+.||+|+-|.|-+|++..+|+.+|||++.... ......+.+||-+|+.+.|||+++|++.+.++.++|||.||
T Consensus 14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEy 93 (786)
T KOG0588|consen 14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEY 93 (786)
T ss_pred eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEe
Confidence 445567999999999999999999999999997652 22344678999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+++|-|+++|.++ ++|++.+..+++.||+.|+.|+| ..+|+||||||+|+|||.+.++||+|||+|.+... .
T Consensus 94 v~gGELFdylv~k--G~l~e~eaa~ff~QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~---g 165 (786)
T KOG0588|consen 94 VPGGELFDYLVRK--GPLPEREAAHFFRQILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKIADFGMASLEVP---G 165 (786)
T ss_pred cCCchhHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHh---hhcceeccCCchhhhhhcccCEeeeccceeecccC---C
Confidence 9999999999654 46999999999999999999999 77899999999999999999999999999986433 2
Q ss_pred cccccccCCCcccChhhhccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccccccc
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQLLT-EKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLK 712 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~s-~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 712 (767)
......||++.|.|||++.+.+|. .++||||.|||||.|++|+.||++. ....|.. .++.|..
T Consensus 166 klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd---Nir~LLl----KV~~G~f--------- 229 (786)
T KOG0588|consen 166 KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD---NIRVLLL----KVQRGVF--------- 229 (786)
T ss_pred ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc---cHHHHHH----HHHcCcc---------
Confidence 344567899999999999998875 6899999999999999999999622 1222222 2222221
Q ss_pred CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 713 GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 713 ~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
+.|...+.+..+|+.+|+..||.+|.|++||++.
T Consensus 230 -~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 230 -EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred -cCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 2345667788999999999999999999999864
No 113
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=3e-36 Score=315.21 Aligned_cols=253 Identities=28% Similarity=0.470 Sum_probs=203.8
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
++|+..+.||+|+||.||+|...++ ..+|+|.+..... ..+.+.+|+.++++++|+|++++++++. .+..+++|||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGN-TKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYM 82 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCC-ceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEec
Confidence 4677788999999999999988744 6799999875433 3457899999999999999999999885 45689999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
++++|.+++++.....+++.++..++.+++.||.||| +.+++|+||||+||++++++.++|+|||++........ .
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~-~ 158 (260)
T cd05070 83 SKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY-T 158 (260)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCceeeeeccCccc-c
Confidence 9999999997655556899999999999999999999 67899999999999999999999999999875432111 1
Q ss_pred ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccC
Q 042216 635 VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKG 713 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 713 (767)
......++..|+|||++....++.++||||||+++|||++ |+.||......+ ... . ...+ ...
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~---~~~---~-~~~~---------~~~ 222 (260)
T cd05070 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE---VLE---Q-VERG---------YRM 222 (260)
T ss_pred cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH---HHH---H-HHcC---------CCC
Confidence 1122335678999999988899999999999999999999 889986543221 111 1 1111 111
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 042216 714 NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEF 750 (767)
Q Consensus 714 ~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~ 750 (767)
..+...+..+.+++.+||+.+|.+|||+.++++.|+.
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 223 PCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 2234456789999999999999999999999999874
No 114
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.1e-36 Score=330.27 Aligned_cols=247 Identities=24% Similarity=0.338 Sum_probs=199.6
Q ss_pred eeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhcc-ccceeeeEeeeeecCCceEEEEecCCCC
Q 042216 482 IIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDGQMILVYDYMARG 557 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~lV~ey~~~g 557 (767)
+||+|+||.||+++....++.||+|+++.. .......+.+|..++..+ +||||+++++++.+.+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g 81 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGG 81 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 699999999999999888899999999753 223345678899999988 7999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccc
Q 042216 558 TLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVST 637 (767)
Q Consensus 558 sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~ 637 (767)
+|.+++.+. ..+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++.... ......
T Consensus 82 ~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~--~~~~~~ 154 (329)
T cd05588 82 DLMFHMQRQ--RKLPEEHARFYSAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR--PGDTTS 154 (329)
T ss_pred CHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCcccccccc--CCCccc
Confidence 999988544 46999999999999999999999 78899999999999999999999999999874221 112233
Q ss_pred cccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCcc--chhHHHHHHHHhhcCCccccccccccCCC
Q 042216 638 QVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKK--QVNLAVWATECYRNGKIGDIIDPFLKGNA 715 (767)
Q Consensus 638 ~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 715 (767)
...||..|+|||++.+..++.++|||||||++|||++|+.||......+ ......+......... ...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~ 224 (329)
T cd05588 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ----------IRI 224 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC----------CCC
Confidence 4578999999999999999999999999999999999999996432211 1122222222222211 112
Q ss_pred ChhhHHHHHHHHHHccccCCCCCCC------HHHHH
Q 042216 716 PPVCLNQFVEVAMSCVNDDRIRRPS------MSDVV 745 (767)
Q Consensus 716 ~~~~~~~l~~li~~Cl~~dp~~RPs------~~evl 745 (767)
+...+.++.+++.+||+.||.+||+ +++++
T Consensus 225 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~ 260 (329)
T cd05588 225 PRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIK 260 (329)
T ss_pred CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHh
Confidence 3445677899999999999999997 67776
No 115
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-37 Score=298.62 Aligned_cols=265 Identities=21% Similarity=0.296 Sum_probs=212.9
Q ss_pred HhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCC-----ce
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDG-----QM 547 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~-----~~ 547 (767)
..++|.+.+.||+|||+-||+++.-.++..+|+|++...+.++.++.++|++..++++|||++++++++..+. ..
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 3467888999999999999999987777899999998888788888999999999999999999999986543 58
Q ss_pred EEEEecCCCCChhhhhccC--CCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcc
Q 042216 548 ILVYDYMARGTLRDHLYNN--DNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCK 625 (767)
Q Consensus 548 ~lV~ey~~~gsL~~~L~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~ 625 (767)
|++++|...|+|.+.+... .+..+++.+.+.|+.++++||++||+.. ++++||||||.|||+.+.+.++|.|||.+.
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCcc
Confidence 9999999999999999653 3346999999999999999999999432 359999999999999999999999999987
Q ss_pred cCCCCCCccc-------cccccCCCcccChhhhcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHH
Q 042216 626 FGPNFSKTHV-------STQVKGSIGYLDPEYYRL---QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWAT 695 (767)
Q Consensus 626 ~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~---~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~ 695 (767)
..+-.-.... -.....|..|.|||.+.- ...++++|||||||+||+|+.|..||...-+.
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~---------- 247 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ---------- 247 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhc----------
Confidence 5322111100 012347889999999864 46789999999999999999999999543221
Q ss_pred HHhhcCCcc-ccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 042216 696 ECYRNGKIG-DIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVF 752 (767)
Q Consensus 696 ~~~~~~~~~-~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~ 752 (767)
.+.+. .+..+.+..+.....++.+.+++.+|++.||.+||++.+++..++.+.
T Consensus 248 ----GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 248 ----GGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred ----CCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 11111 112222333333447889999999999999999999999999998765
No 116
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=3.2e-36 Score=314.16 Aligned_cols=251 Identities=31% Similarity=0.501 Sum_probs=207.8
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
.++|+..+.||+|+||.||+|...+ +.||+|.+..... ..+++.+|+.++++++|+|++++++++..++..++||||
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~~--~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 81 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYRG--QKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEY 81 (256)
T ss_pred hhhccceeeeecCCCceEEEEEecC--cEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEe
Confidence 3467788899999999999998863 7899999976544 567899999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+++++|.+++.......+++..+..++.|++.||.||| ..+++|+||||+||++++++.+||+|||+++.....
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~--- 155 (256)
T cd05039 82 MAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG--- 155 (256)
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEcccccccccccc---
Confidence 99999999997665557999999999999999999999 788999999999999999999999999998854221
Q ss_pred cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCcccccccccc
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLK 712 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 712 (767)
......+..|+|||++....++.++||||||++++||++ |+.||...... .+.. ....+ ..
T Consensus 156 --~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~----~~~~~---------~~ 217 (256)
T cd05039 156 --QDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVVP----HVEKG---------YR 217 (256)
T ss_pred --cccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH---HHHH----HHhcC---------CC
Confidence 112335678999999998899999999999999999997 99998544321 1111 11111 11
Q ss_pred CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 042216 713 GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFV 751 (767)
Q Consensus 713 ~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~ 751 (767)
...+..++..+.+++.+||..+|++||++.|++++|+.+
T Consensus 218 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 218 MEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred CCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 122344567899999999999999999999999999753
No 117
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=3e-36 Score=320.39 Aligned_cols=261 Identities=24% Similarity=0.409 Sum_probs=206.3
Q ss_pred HhhccccceeeeccCcEEEEEEEecC-----CCceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecCCc
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLNG-----DSTPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQ 546 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~ 546 (767)
..++|+..+.||+|+||.||+|..++ .+..||+|.+.... .....++.+|+.+++.++||||+++++++.+.+.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 45678889999999999999997642 23579999886443 2234468899999999999999999999999999
Q ss_pred eEEEEecCCCCChhhhhccCC--------CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEE
Q 042216 547 MILVYDYMARGTLRDHLYNND--------NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKV 618 (767)
Q Consensus 547 ~~lV~ey~~~gsL~~~L~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki 618 (767)
.++||||+++|+|.+++.+.. ...+++..+..++.|++.||.||| +++|+||||||+|||+++++.+||
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCCChheEEEcCCCcEEE
Confidence 999999999999999996421 234678889999999999999999 788999999999999999999999
Q ss_pred eecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHH
Q 042216 619 SDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATEC 697 (767)
Q Consensus 619 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~ 697 (767)
+|||+++...............++..|+|||.+..+.++.++|||||||++|||++ |..||......+ .. ..
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~---~~---~~- 233 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ---VL---KF- 233 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HH---HH-
Confidence 99999875432222111222345678999999998899999999999999999998 788886543221 11 11
Q ss_pred hhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 042216 698 YRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVF 752 (767)
Q Consensus 698 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~ 752 (767)
...+.. ...+..++..+.+++.+||+.+|++||++.++++.|++.+
T Consensus 234 ~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 234 VMDGGY---------LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred HHcCCC---------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 111111 1123344678999999999999999999999999998764
No 118
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2.2e-36 Score=317.31 Aligned_cols=259 Identities=22% Similarity=0.330 Sum_probs=208.6
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
.+|...+.||+|+||.||+|+...+++.||||.+... .......+.+|+++++.++|||++++++++...+..++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 4688888999999999999999888899999987542 2233456889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhcc--CCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCC
Q 042216 552 DYMARGTLRDHLYN--NDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPN 629 (767)
Q Consensus 552 ey~~~gsL~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~ 629 (767)
||+++|+|.+++.. .....+++.++..++.|++.||.||| +.+++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 99999999988853 22345889999999999999999999 78899999999999999999999999999876432
Q ss_pred CCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccc
Q 042216 630 FSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDP 709 (767)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 709 (767)
.. .......++..|+|||.+.+..++.++|+||||+++|||++|+.||...... ...+... ......
T Consensus 159 ~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~----~~~~~~~-~~~~~~------ 225 (267)
T cd08228 159 KT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LFSLCQK-IEQCDY------ 225 (267)
T ss_pred hh--HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc----HHHHHHH-HhcCCC------
Confidence 11 1122345888999999999888999999999999999999999998543221 1111111 111110
Q ss_pred cccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 042216 710 FLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFV 751 (767)
Q Consensus 710 ~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~ 751 (767)
........+..+.+++.+||+.+|.+||++.+|++.|+.+
T Consensus 226 --~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 226 --PPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred --CCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 0111223456789999999999999999999999999875
No 119
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4.3e-36 Score=321.69 Aligned_cols=264 Identities=19% Similarity=0.247 Sum_probs=200.4
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC-cchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEe
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ-QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~e 552 (767)
.++|...+.||+|+||.||+|+...+++.||||++..... .....+.+|+++++.++||||+++++++.++...++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 3678889999999999999999988888999999875432 233457889999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK 632 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~ 632 (767)
|++ ++|.+++.... ..+++..+..++.|++.||.||| +++|+||||||+|||+++++.+||+|||+++.....
T Consensus 84 ~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-- 156 (303)
T cd07869 84 YVH-TDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLADFGLARAKSVP-- 156 (303)
T ss_pred CCC-cCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECCCCcceeccCC--
Confidence 996 58888886543 45889999999999999999999 788999999999999999999999999998753221
Q ss_pred ccccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCC---cc----
Q 042216 633 THVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGK---IG---- 704 (767)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~---~~---- 704 (767)
........+++.|+|||.+.+ ..++.++|||||||++|||++|+.||....+.. .............. ..
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
T cd07869 157 SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQ--DQLERIFLVLGTPNEDTWPGVHS 234 (303)
T ss_pred CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHH--HHHHHHHHHhCCCChhhccchhh
Confidence 112234568899999999865 468899999999999999999999997543321 11111111110000 00
Q ss_pred -ccccc-cccCCCC---------hhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 705 -DIIDP-FLKGNAP---------PVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 705 -~~~d~-~l~~~~~---------~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
...++ ......+ ...+..+.+++.+||+.||.+|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 235 LPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred ccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 00000 0000000 012356789999999999999999999984
No 120
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=2e-36 Score=318.59 Aligned_cols=250 Identities=28% Similarity=0.492 Sum_probs=199.3
Q ss_pred eeeccCcEEEEEEEecCCCc--eEEEEEeCCCC-CcchhHHHHHHHHHhcc-ccceeeeEeeeeecCCceEEEEecCCCC
Q 042216 482 IIGRGGFGNVYKGFLNGDST--PVAIKRLNPGS-QQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDGQMILVYDYMARG 557 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~--~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~lV~ey~~~g 557 (767)
+||+|+||.||+|++.+++. .+++|.++... ......+.+|++++.++ +||||++++++|...+..+++|||+++|
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 81 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence 68999999999999876654 46888887432 34456789999999999 7999999999999999999999999999
Q ss_pred ChhhhhccCC--------------CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCC
Q 042216 558 TLRDHLYNND--------------NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGL 623 (767)
Q Consensus 558 sL~~~L~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGl 623 (767)
+|.+++.... ...+++.++..++.|++.||+||| +.+++|+||||+|||+++++.+||+|||+
T Consensus 82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nili~~~~~~kl~dfgl 158 (270)
T cd05047 82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGL 158 (270)
T ss_pred cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccccceEEEcCCCeEEECCCCC
Confidence 9999986432 134889999999999999999999 78899999999999999999999999999
Q ss_pred cccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCC
Q 042216 624 CKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGK 702 (767)
Q Consensus 624 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~ 702 (767)
++.... .........+..|+|||++....++.++|||||||+++||++ |..||......+ . ... ...+
T Consensus 159 ~~~~~~---~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~---~---~~~-~~~~- 227 (270)
T cd05047 159 SRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---L---YEK-LPQG- 227 (270)
T ss_pred ccccch---hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH---H---HHH-HhCC-
Confidence 863211 111112234567999999998899999999999999999997 999985433211 1 111 1111
Q ss_pred ccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 042216 703 IGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQ 753 (767)
Q Consensus 703 ~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~ 753 (767)
.....+..++.++.+++.+||+.+|.+||++.++++.|+.+++
T Consensus 228 --------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~~ 270 (270)
T cd05047 228 --------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 270 (270)
T ss_pred --------CCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhhC
Confidence 1111223455678999999999999999999999999998763
No 121
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2.6e-36 Score=315.27 Aligned_cols=248 Identities=25% Similarity=0.378 Sum_probs=198.4
Q ss_pred eeeccCcEEEEEEEe--cCCCceEEEEEeCCCC--CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCC
Q 042216 482 IIGRGGFGNVYKGFL--NGDSTPVAIKRLNPGS--QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARG 557 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~--~~~~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~g 557 (767)
.||+|+||.||+|.+ ..++..+|+|+++... ....+++.+|+.+++.++||||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 589999999999975 3445789999986443 223567899999999999999999999986 45778999999999
Q ss_pred ChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc-cc
Q 042216 558 TLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH-VS 636 (767)
Q Consensus 558 sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~-~~ 636 (767)
+|.+++... ..+++..+..++.|++.||.||| +++++||||||+|||+++++.+||+|||+++......... ..
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05116 81 PLNKFLQKN--KHVTEKNITELVHQVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAK 155 (257)
T ss_pred cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeec
Confidence 999999643 35899999999999999999999 7889999999999999999999999999987543221111 11
Q ss_pred ccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCC
Q 042216 637 TQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNA 715 (767)
Q Consensus 637 ~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 715 (767)
....++..|+|||.+....++.++|||||||++|||++ |+.||......+ +.. ...++ .....
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~----~i~~~---------~~~~~ 219 (257)
T cd05116 156 THGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE---VTQ----MIESG---------ERMEC 219 (257)
T ss_pred CCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH----HHHCC---------CCCCC
Confidence 22334678999999988889999999999999999998 999996543321 111 11111 11223
Q ss_pred ChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 042216 716 PPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFV 751 (767)
Q Consensus 716 ~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~ 751 (767)
+..++.++.+++.+||+.||++||++++|++.|++.
T Consensus 220 ~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 220 PQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 445677899999999999999999999999999753
No 122
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.3e-36 Score=329.48 Aligned_cols=247 Identities=26% Similarity=0.354 Sum_probs=198.2
Q ss_pred eeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhcc-ccceeeeEeeeeecCCceEEEEecCCCC
Q 042216 482 IIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDGQMILVYDYMARG 557 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~lV~ey~~~g 557 (767)
+||+|+||.||++....+++.+|+|+++.. .......+.+|+.++.++ +||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~ 81 (329)
T cd05618 2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGG 81 (329)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCC
Confidence 699999999999999888899999998754 223345578898888776 8999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccc
Q 042216 558 TLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVST 637 (767)
Q Consensus 558 sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~ 637 (767)
+|..++... ..+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++..... .....
T Consensus 82 ~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~--~~~~~ 154 (329)
T cd05618 82 DLMFHMQRQ--RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP--GDTTS 154 (329)
T ss_pred CHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCC--CCccc
Confidence 999988543 45899999999999999999999 788999999999999999999999999998743221 11223
Q ss_pred cccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCcc--chhHHHHHHHHhhcCCccccccccccCCC
Q 042216 638 QVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKK--QVNLAVWATECYRNGKIGDIIDPFLKGNA 715 (767)
Q Consensus 638 ~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 715 (767)
...||..|+|||++.+..++.++|||||||++|||++|+.||....... ......+......... ...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~----------~~~ 224 (329)
T cd05618 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ----------IRI 224 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC----------CCC
Confidence 4568999999999999999999999999999999999999995322111 1112222222222211 123
Q ss_pred ChhhHHHHHHHHHHccccCCCCCCC------HHHHH
Q 042216 716 PPVCLNQFVEVAMSCVNDDRIRRPS------MSDVV 745 (767)
Q Consensus 716 ~~~~~~~l~~li~~Cl~~dp~~RPs------~~evl 745 (767)
|...+.++.+++.+||+.||.+||+ +.+++
T Consensus 225 p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~ 260 (329)
T cd05618 225 PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQ 260 (329)
T ss_pred CCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHh
Confidence 4455677889999999999999998 46665
No 123
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.8e-36 Score=317.18 Aligned_cols=256 Identities=26% Similarity=0.440 Sum_probs=205.5
Q ss_pred ccccceeeeccCcEEEEEEEecCCCc---eEEEEEeCCC-CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDST---PVAIKRLNPG-SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~---~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
++...+.||+|+||.||+|.+..++. .||||.+... ......+|..|+.++++++||||+++++++.+++..++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 46778899999999999999875543 6999998754 3334567999999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
||+++|+|.+++.... ..+++.+++.++.|++.||.||| +.+++|+||||+||+++.++.+||+|||+++......
T Consensus 85 e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 160 (269)
T cd05065 85 EFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 160 (269)
T ss_pred ecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccChheEEEcCCCcEEECCCccccccccCc
Confidence 9999999999986543 35899999999999999999999 7889999999999999999999999999987543321
Q ss_pred Cccccc-ccc--CCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccc
Q 042216 632 KTHVST-QVK--GSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDII 707 (767)
Q Consensus 632 ~~~~~~-~~~--gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 707 (767)
...... ... .+..|+|||++....++.++|||||||++|||++ |+.||...... ....+.. ..
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~---~~~~~i~----~~------ 227 (269)
T cd05065 161 SDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ---DVINAIE----QD------ 227 (269)
T ss_pred cccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH---HHHHHHH----cC------
Confidence 111111 111 2457999999999999999999999999999886 99998654322 1222211 10
Q ss_pred cccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 042216 708 DPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFV 751 (767)
Q Consensus 708 d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~ 751 (767)
.....+..++..+.+++.+||+.+|.+||++.+|+.+|+++
T Consensus 228 ---~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 228 ---YRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ---CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11122345567789999999999999999999999999875
No 124
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=4.6e-36 Score=313.60 Aligned_cols=249 Identities=24% Similarity=0.388 Sum_probs=198.8
Q ss_pred eeeccCcEEEEEEEec--CCCceEEEEEeCCCCC-cchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCC
Q 042216 482 IIGRGGFGNVYKGFLN--GDSTPVAIKRLNPGSQ-QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGT 558 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~--~~~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gs 558 (767)
.||+|+||.||+|.+. +.+..||+|++..... ...+++.+|+.++++++||||++++++|. ....++||||+++|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 3899999999999875 3345699999876533 23456899999999999999999999986 457899999999999
Q ss_pred hhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc-ccc
Q 042216 559 LRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH-VST 637 (767)
Q Consensus 559 L~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~-~~~ 637 (767)
|.+++.... ..+++.++++++.|++.||.||| +++++||||||+|||++.++.+||+|||+++......... ...
T Consensus 81 L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 156 (257)
T cd05115 81 LNKFLSGKK-DEITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARS 156 (257)
T ss_pred HHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccC
Confidence 999986433 46899999999999999999999 7789999999999999999999999999987543221111 112
Q ss_pred cccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCC
Q 042216 638 QVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAP 716 (767)
Q Consensus 638 ~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 716 (767)
...++..|+|||.+....++.++|||||||++|||++ |+.||......+ .. .....+ .....+
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~----~~~~~~---------~~~~~~ 220 (257)
T cd05115 157 AGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE---VM----SFIEQG---------KRLDCP 220 (257)
T ss_pred CCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH---HH----HHHHCC---------CCCCCC
Confidence 2234678999999998889999999999999999996 999996543321 11 111111 112334
Q ss_pred hhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 042216 717 PVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFV 751 (767)
Q Consensus 717 ~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~ 751 (767)
..++.++.+++.+||+.+|++||++.+|.+.|+..
T Consensus 221 ~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 221 AECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 56678899999999999999999999999999864
No 125
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=4.6e-37 Score=332.60 Aligned_cols=243 Identities=24% Similarity=0.312 Sum_probs=198.0
Q ss_pred eeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCC
Q 042216 482 IIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGT 558 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gs 558 (767)
.||+|+||.||++.....++.||+|++... ......++.+|++++..++||||+++.+++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCc
Confidence 699999999999999888899999998653 22334567889999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcccccc
Q 042216 559 LRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQ 638 (767)
Q Consensus 559 L~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~ 638 (767)
|.+++... ..+++.++..++.|++.||.|||+ ..+|+||||||+|||++.++.+||+|||+++..... ......
T Consensus 82 L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~--~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~--~~~~~~ 155 (325)
T cd05594 82 LFFHLSRE--RVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--GATMKT 155 (325)
T ss_pred HHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC--Cccccc
Confidence 99988543 458999999999999999999993 268999999999999999999999999998743221 112234
Q ss_pred ccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChh
Q 042216 639 VKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPV 718 (767)
Q Consensus 639 ~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 718 (767)
..||..|+|||++.+..++.++|||||||++|||++|+.||......+. .. ...... ...+..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~---~~----~i~~~~----------~~~p~~ 218 (325)
T cd05594 156 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL---FE----LILMEE----------IRFPRT 218 (325)
T ss_pred ccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHH---HH----HHhcCC----------CCCCCC
Confidence 5699999999999999999999999999999999999999965432211 11 011110 112334
Q ss_pred hHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 042216 719 CLNQFVEVAMSCVNDDRIRRP-----SMSDVVWG 747 (767)
Q Consensus 719 ~~~~l~~li~~Cl~~dp~~RP-----s~~evl~~ 747 (767)
.+.++.+++.+||+.||.+|+ ++.++++.
T Consensus 219 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 219 LSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 566789999999999999996 89998743
No 126
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.8e-36 Score=318.04 Aligned_cols=260 Identities=23% Similarity=0.341 Sum_probs=208.9
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
.+|...+.||+|+||.||++....++..+|||.+... ......++.+|+.+++.++|+||+++++++.+++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 3567777899999999999998878889999987643 2233457889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhcc--CCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCC
Q 042216 552 DYMARGTLRDHLYN--NDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPN 629 (767)
Q Consensus 552 ey~~~gsL~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~ 629 (767)
||+++++|.+++.. .....+++.+++.++.|++.||.||| +.+++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 99999999998863 23356899999999999999999999 78899999999999999999999999999875432
Q ss_pred CCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccc
Q 042216 630 FSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDP 709 (767)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 709 (767)
.. .......++..|+|||.+.+..++.++||||||+++|||++|..||...... ...+... ... ...+
T Consensus 159 ~~--~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~~-~~~-----~~~~ 226 (267)
T cd08229 159 KT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSLCKK-IEQ-----CDYP 226 (267)
T ss_pred CC--cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch----HHHHhhh-hhc-----CCCC
Confidence 11 1122345888999999999889999999999999999999999998643321 1111111 010 0001
Q ss_pred cccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 042216 710 FLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVF 752 (767)
Q Consensus 710 ~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~ 752 (767)
...+...+.++.+++.+||+.+|.+||||.+|+++++++.
T Consensus 227 ---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 227 ---PLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred ---CCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 1112235678999999999999999999999999998763
No 127
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.8e-36 Score=323.08 Aligned_cols=262 Identities=23% Similarity=0.448 Sum_probs=207.9
Q ss_pred hccccceeeeccCcEEEEEEEec-------CCCceEEEEEeCCCC-CcchhHHHHHHHHHhcc-ccceeeeEeeeeecCC
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLN-------GDSTPVAIKRLNPGS-QQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDG 545 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~-------~~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~ 545 (767)
.+|...+.||+|+||.||+++.. .....+|+|.++... .....++.+|++++.++ +||||++++++|..++
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 46778889999999999999753 223579999987542 33455788999999999 6999999999999999
Q ss_pred ceEEEEecCCCCChhhhhccCC--------------CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEEC
Q 042216 546 QMILVYDYMARGTLRDHLYNND--------------NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLD 611 (767)
Q Consensus 546 ~~~lV~ey~~~gsL~~~L~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld 611 (767)
..++++||+++|+|.+++.... ...++|.++.+++.|++.||.||| +++++||||||+|||++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE---SRRCIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeeccccceeEEEc
Confidence 9999999999999999996532 245899999999999999999999 78899999999999999
Q ss_pred CCCcEEEeecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhH
Q 042216 612 EEWVAKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNL 690 (767)
Q Consensus 612 ~~~~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l 690 (767)
+++.+||+|||+++...............++..|+|||.+..+.++.++|||||||++|||++ |+.||......+ +
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~---~ 245 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE---L 245 (314)
T ss_pred CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH---H
Confidence 999999999999975432211111122234567999999998899999999999999999999 888885443211 1
Q ss_pred HHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhh
Q 042216 691 AVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQLL 755 (767)
Q Consensus 691 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~~ 755 (767)
.. ....+. ....+..++.++.+++.+||+.+|++||++.|+++.|+++....
T Consensus 246 ~~----~~~~~~---------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 297 (314)
T cd05099 246 FK----LLREGH---------RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV 297 (314)
T ss_pred HH----HHHcCC---------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence 11 111111 11224456678899999999999999999999999999887654
No 128
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.7e-36 Score=330.65 Aligned_cols=261 Identities=25% Similarity=0.405 Sum_probs=203.4
Q ss_pred hccccceeeeccCcEEEEEEEec-----CCCceEEEEEeCCCC-CcchhHHHHHHHHHhcc-ccceeeeEeeeeecC-Cc
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLN-----GDSTPVAIKRLNPGS-QQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDD-GQ 546 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~-----~~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~-~~ 546 (767)
++|...+.||+|+||.||+|... ..++.||||+++... ......+.+|+.++.++ +||||++++++|... ..
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 46888889999999999999742 235789999997543 23345688999999999 689999999988654 56
Q ss_pred eEEEEecCCCCChhhhhccCC-----------------------------------------------------------
Q 042216 547 MILVYDYMARGTLRDHLYNND----------------------------------------------------------- 567 (767)
Q Consensus 547 ~~lV~ey~~~gsL~~~L~~~~----------------------------------------------------------- 567 (767)
.+++|||+++|+|.++++...
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 166 (343)
T ss_pred eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence 789999999999999986421
Q ss_pred ------CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccccccC
Q 042216 568 ------NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQVKG 641 (767)
Q Consensus 568 ------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~~g 641 (767)
...+++.++..++.|+++||.||| +++|+||||||+|||+++++.+||+|||+++...............+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 243 (343)
T cd05103 167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL 243 (343)
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCC
Confidence 124788999999999999999999 78899999999999999999999999999875432211111222345
Q ss_pred CCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhhH
Q 042216 642 SIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCL 720 (767)
Q Consensus 642 t~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 720 (767)
+..|+|||.+.+..++.++||||||+++|||++ |..||....... .+. .....+.. ...+....
T Consensus 244 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~----~~~~~~~~---------~~~~~~~~ 308 (343)
T cd05103 244 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFC----RRLKEGTR---------MRAPDYTT 308 (343)
T ss_pred CcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH--HHH----HHHhccCC---------CCCCCCCC
Confidence 678999999998899999999999999999997 899985432211 111 11111111 11122234
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 042216 721 NQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQ 753 (767)
Q Consensus 721 ~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~ 753 (767)
.++.+++.+||+.+|.+||++.||++.|+.+++
T Consensus 309 ~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 309 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 578999999999999999999999999998875
No 129
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.3e-36 Score=327.84 Aligned_cols=240 Identities=26% Similarity=0.367 Sum_probs=193.8
Q ss_pred eeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhcc-ccceeeeEeeeeecCCceEEEEecCCCC
Q 042216 482 IIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDGQMILVYDYMARG 557 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~lV~ey~~~g 557 (767)
.||+|+||.||+|...+.++.||+|.++... ....+.+..|..++..+ +||||+++++++..++..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg 81 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 6999999999999998888899999987532 23344556677777654 8999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccc
Q 042216 558 TLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVST 637 (767)
Q Consensus 558 sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~ 637 (767)
+|.+++... ..+++.++..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++...... ....
T Consensus 82 ~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--~~~~ 154 (316)
T cd05592 82 DLMFHIQSS--GRFDEARARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--GKAS 154 (316)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--Cccc
Confidence 999998654 35899999999999999999999 7889999999999999999999999999987532211 2233
Q ss_pred cccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCCh
Q 042216 638 QVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPP 717 (767)
Q Consensus 638 ~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 717 (767)
...||+.|+|||++.+..++.++|||||||++|||++|+.||......+ + ... .... ....+.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~---~---~~~-i~~~----------~~~~~~ 217 (316)
T cd05592 155 TFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE---L---FDS-ILND----------RPHFPR 217 (316)
T ss_pred cccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH---H---HHH-HHcC----------CCCCCC
Confidence 4568999999999999899999999999999999999999996543321 1 111 1110 112334
Q ss_pred hhHHHHHHHHHHccccCCCCCCCHH-HHH
Q 042216 718 VCLNQFVEVAMSCVNDDRIRRPSMS-DVV 745 (767)
Q Consensus 718 ~~~~~l~~li~~Cl~~dp~~RPs~~-evl 745 (767)
..+.++.+++.+||+.||.+||++. +++
T Consensus 218 ~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 218 WISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred CCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 4567788999999999999999876 443
No 130
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.5e-36 Score=335.84 Aligned_cols=254 Identities=23% Similarity=0.310 Sum_probs=199.5
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEe
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~e 552 (767)
.|..++.||+|+||+||+|....+++.+|||++.... ......+.+|++++.+++||||+++++++.+.+.+++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5788889999999999999998888999999986432 2334568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK 632 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~ 632 (767)
|+++|+|.+++.+. ..+++..+..++.|++.||.||| ..+|+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~ 156 (381)
T cd05626 82 YIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHN 156 (381)
T ss_pred cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccc
Confidence 99999999999654 35889999999999999999999 78899999999999999999999999999753210000
Q ss_pred ---------------------------------------------ccccccccCCCcccChhhhccCCCCchhhHHHHHH
Q 042216 633 ---------------------------------------------THVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGV 667 (767)
Q Consensus 633 ---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGv 667 (767)
........||..|+|||.+.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~ 236 (381)
T cd05626 157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV 236 (381)
T ss_pred cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence 00012346999999999999889999999999999
Q ss_pred HHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHH--ccccCCCCCCCHHHHH
Q 042216 668 VLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMS--CVNDDRIRRPSMSDVV 745 (767)
Q Consensus 668 vl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~--Cl~~dp~~RPs~~evl 745 (767)
++|||++|+.||......+.. . ..... ...+........+.++.+++.+ |+..++..||++.|++
T Consensus 237 il~elltG~~Pf~~~~~~~~~--~----~i~~~-------~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l 303 (381)
T cd05626 237 ILFEMLVGQPPFLAPTPTETQ--L----KVINW-------ENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIK 303 (381)
T ss_pred HHHHHHhCCCCCcCCCHHHHH--H----HHHcc-------ccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHh
Confidence 999999999999654332111 0 00000 0001111112345667788876 6667777799999998
Q ss_pred HH
Q 042216 746 WG 747 (767)
Q Consensus 746 ~~ 747 (767)
..
T Consensus 304 ~h 305 (381)
T cd05626 304 AH 305 (381)
T ss_pred cC
Confidence 53
No 131
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.1e-36 Score=332.51 Aligned_cols=255 Identities=23% Similarity=0.355 Sum_probs=197.3
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
++|+..+.||+|+||+||++.....++.||||++.... ......+.+|+.++.+++|+||+++++.+.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 46888999999999999999998888999999986432 223456788999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
||+++|+|.+++.+. ..+++.++..++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 81 EFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred cCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEEeeccCcccccccc
Confidence 999999999999654 46899999999999999999999 7889999999999999999999999999987532110
Q ss_pred Cc---------------------------------cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCC
Q 042216 632 KT---------------------------------HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPP 678 (767)
Q Consensus 632 ~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P 678 (767)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence 00 001234699999999999999999999999999999999999999
Q ss_pred CCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHcc--ccCCCCCCCHHHHHHH
Q 042216 679 ILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCV--NDDRIRRPSMSDVVWG 747 (767)
Q Consensus 679 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl--~~dp~~RPs~~evl~~ 747 (767)
|......+.. .. ..... ..+. + ......+.++.+++.+++ ..++..||+++||++.
T Consensus 236 f~~~~~~~~~------~~-i~~~~-~~~~---~--p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 236 FCSETPQETY------KK-VMNWK-ETLI---F--PPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCCCCHHHHH------HH-HHcCc-Cccc---C--CCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 9654322111 11 11100 0000 0 001123455667776633 3344567999999864
No 132
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.5e-36 Score=328.47 Aligned_cols=242 Identities=26% Similarity=0.357 Sum_probs=196.8
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccccc-eeeeEeeeeecCCceEEEE
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLRYL-HLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~Hp-niv~l~g~~~~~~~~~lV~ 551 (767)
+|...+.||+|+||.||+|+..+.++.||||++... .....+.+..|++++..++|+ +|+++.+++.+.+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 477888999999999999999888889999998753 233455678899999999764 6888999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
||+++|+|.+++... ..+++.++..++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~-- 153 (324)
T cd05587 81 EYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIF-- 153 (324)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEeecCcceecCC--
Confidence 999999999998654 35899999999999999999999 78899999999999999999999999999874221
Q ss_pred CccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccc
Q 042216 632 KTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFL 711 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 711 (767)
.........||..|+|||++.+..++.++|||||||++|||++|+.||......+ +.. . ....
T Consensus 154 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~---~~~---~-i~~~---------- 216 (324)
T cd05587 154 GGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE---LFQ---S-IMEH---------- 216 (324)
T ss_pred CCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH---HHH---H-HHcC----------
Confidence 1112234568999999999999999999999999999999999999996543221 111 1 1111
Q ss_pred cCCCChhhHHHHHHHHHHccccCCCCCCCH
Q 042216 712 KGNAPPVCLNQFVEVAMSCVNDDRIRRPSM 741 (767)
Q Consensus 712 ~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~ 741 (767)
....+...+.++.+++.+||+.||.+|++.
T Consensus 217 ~~~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 217 NVSYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred CCCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 112233456778999999999999999976
No 133
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=2.9e-36 Score=314.56 Aligned_cols=249 Identities=34% Similarity=0.501 Sum_probs=202.6
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeee-cCCceEEEEec
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCN-DDGQMILVYDY 553 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~-~~~~~~lV~ey 553 (767)
.+|...+.||+|+||.||++...+ ..+|+|.++.. ...+.+.+|+.++++++|+|++++++++. .++..++++||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~--~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYRG--NKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEcC--CcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 467888899999999999998764 67999998643 23457899999999999999999999764 45678999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+++|+|.+++.......+++..++.++.|++.||+||| +++++||||||+||++++++.+||+|||+++.....
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~--- 155 (256)
T cd05082 82 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 155 (256)
T ss_pred CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCCccceecccc---
Confidence 99999999997665556899999999999999999999 788999999999999999999999999998753221
Q ss_pred cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCcccccccccc
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLK 712 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 712 (767)
.....++..|+|||++....++.++|||||||++|||++ |+.||..... ...... ...+ ..
T Consensus 156 --~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~------~~~~~~-~~~~---------~~ 217 (256)
T cd05082 156 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL------KDVVPR-VEKG---------YK 217 (256)
T ss_pred --CCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH------HHHHHH-HhcC---------CC
Confidence 122335678999999998899999999999999999997 9999854321 111111 1111 11
Q ss_pred CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 042216 713 GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFV 751 (767)
Q Consensus 713 ~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~ 751 (767)
...+..++..+.+++.+||+.+|.+|||+.++++.|+.+
T Consensus 218 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 218 MDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 122345667899999999999999999999999998753
No 134
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.8e-36 Score=327.90 Aligned_cols=245 Identities=26% Similarity=0.390 Sum_probs=196.7
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHH---hccccceeeeEeeeeecCCceEEE
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGML---SQLRYLHLVSLIGYCNDDGQMILV 550 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l---~~l~Hpniv~l~g~~~~~~~~~lV 550 (767)
|...+.||+|+||.||+|....+++.||||+++... ....+.+.+|++++ ..++||||+++++++...+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 456789999999999999998888999999986432 23344566676554 567899999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCC
Q 042216 551 YDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNF 630 (767)
Q Consensus 551 ~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~ 630 (767)
|||+++|+|..++.+ ..+++.++..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05589 81 MEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF 154 (324)
T ss_pred EcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence 999999999988854 35899999999999999999999 788999999999999999999999999998743221
Q ss_pred CCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccccc
Q 042216 631 SKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPF 710 (767)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 710 (767)
........|++.|+|||.+.+..++.++|||||||++|||++|+.||......+. ... ...+.
T Consensus 155 --~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~------~~~-i~~~~-------- 217 (324)
T cd05589 155 --GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEV------FDS-IVNDE-------- 217 (324)
T ss_pred --CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHH------HHH-HHhCC--------
Confidence 1222345689999999999999999999999999999999999999965432211 111 11111
Q ss_pred ccCCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 042216 711 LKGNAPPVCLNQFVEVAMSCVNDDRIRRP-----SMSDVVW 746 (767)
Q Consensus 711 l~~~~~~~~~~~l~~li~~Cl~~dp~~RP-----s~~evl~ 746 (767)
...+...+..+.+++.+||+.||.+|| ++.++++
T Consensus 218 --~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 218 --VRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred --CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 112344567789999999999999999 4666654
No 135
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=5.2e-36 Score=313.45 Aligned_cols=254 Identities=28% Similarity=0.452 Sum_probs=206.1
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
.++|+..++||+|+||.||+|..++ ++.+|+|.+.... ....++.+|+.++++++|+|++++++++. .+..+++|||
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~-~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNG-HTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEY 81 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCC-CceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEc
Confidence 3567888899999999999998765 4789999987543 33567899999999999999999999874 4578999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+++|+|.+++.......+++.++..++.|++.||+||| +.+++|+||||+||++++++.++|+|||++....... .
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-~ 157 (260)
T cd05067 82 MENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNE-Y 157 (260)
T ss_pred CCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCC-c
Confidence 99999999997766667999999999999999999999 7889999999999999999999999999987543211 1
Q ss_pred cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCcccccccccc
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLK 712 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 712 (767)
.......++..|+|||++....++.++||||||++++||++ |+.||......+ .... ...+ ..
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~----~~~~---------~~ 221 (260)
T cd05067 158 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE---VIQN----LERG---------YR 221 (260)
T ss_pred ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH---HHHH----HHcC---------CC
Confidence 11223345678999999998899999999999999999999 999996543221 1111 1111 11
Q ss_pred CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 042216 713 GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEF 750 (767)
Q Consensus 713 ~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~ 750 (767)
...+...+.++.+++.+||+.+|++||+++++++.|+.
T Consensus 222 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 222 MPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 12233456789999999999999999999999999975
No 136
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=7.3e-37 Score=334.49 Aligned_cols=254 Identities=24% Similarity=0.334 Sum_probs=205.6
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
++|...+.||+|+||.||++....+++.||||++... .......+.+|++++..++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 3688889999999999999999888899999998643 2234557889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
||+++|+|.+++.+. ..+++..+..++.|++.||.||| .++|+||||||+|||++.++.+||+|||+++......
T Consensus 81 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 81 EYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence 999999999999655 46899999999999999999999 7889999999999999999999999999987543321
Q ss_pred ---------------------------CccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Q 042216 632 ---------------------------KTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGD 684 (767)
Q Consensus 632 ---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~ 684 (767)
.........||+.|+|||.+.+..++.++|||||||++|||++|+.||.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~ 235 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL 235 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH
Confidence 00112345689999999999999999999999999999999999999965442
Q ss_pred ccchhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCC-HHHHHHH
Q 042216 685 KKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPS-MSDVVWG 747 (767)
Q Consensus 685 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs-~~evl~~ 747 (767)
.+. ........ ..+........+.++.+++.+|++ ||.+||+ +.++++.
T Consensus 236 ~~~------~~~i~~~~-------~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 236 QET------YNKIINWK-------ESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred HHH------HHHHhccC-------CcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 111 01111100 001111111246778999999997 9999999 9999864
No 137
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=3.5e-36 Score=319.78 Aligned_cols=257 Identities=27% Similarity=0.440 Sum_probs=205.5
Q ss_pred hhccccceeeeccCcEEEEEEEecC-----CCceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecCCce
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNG-----DSTPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQM 547 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~ 547 (767)
.++|+....||+|+||.||++...+ ++..+|+|++.... .....++.+|+.++++++|||+++++++|..++..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 4578888899999999999998743 45789999987543 23456789999999999999999999999999999
Q ss_pred EEEEecCCCCChhhhhccCC--------------------CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCC
Q 042216 548 ILVYDYMARGTLRDHLYNND--------------------NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTN 607 (767)
Q Consensus 548 ~lV~ey~~~gsL~~~L~~~~--------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~N 607 (767)
++++||+++|+|.+++.... ...+++.+++.++.|++.||.||| ..+++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH---~~~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS---ERKFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCeecccccHhh
Confidence 99999999999999996421 134789999999999999999999 7889999999999
Q ss_pred eEECCCCcEEEeecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCcc
Q 042216 608 ILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKK 686 (767)
Q Consensus 608 ILld~~~~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~ 686 (767)
||+++++.+||+|||+++................+..|+|||.+.+..++.++|||||||++|||++ |..||......+
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~ 240 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEE 240 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 9999999999999999875332221111222335678999999998899999999999999999997 888885443221
Q ss_pred chhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 042216 687 QVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLE 749 (767)
Q Consensus 687 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~ 749 (767)
... ....+... ..+..++.++.+++.+||+.+|.+|||+.|+++.|+
T Consensus 241 ------~~~-~~~~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 241 ------VIY-YVRDGNVL---------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred ------HHH-HHhcCCCC---------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 111 11122111 123345678999999999999999999999999987
No 138
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=9.9e-36 Score=311.41 Aligned_cols=253 Identities=28% Similarity=0.441 Sum_probs=203.3
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
++|.....||+|++|.||++...++ ..+|+|.+.... ...+.+.+|++++++++|+|++++++++. .+..+++|||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFM 82 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcC
Confidence 4577778999999999999988765 469999886543 33457889999999999999999999885 45688999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
++|+|.++++......+++..+..++.|++.||.||| +.+++|+||||+||++++++.++|+|||+++....... .
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~-~ 158 (260)
T cd05069 83 GKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY-T 158 (260)
T ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCccceEccCCcc-c
Confidence 9999999997665556899999999999999999999 77899999999999999999999999999875432111 1
Q ss_pred ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccC
Q 042216 635 VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKG 713 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 713 (767)
......++..|+|||...+..++.++||||||+++|||++ |+.||......+ ...+. ..+ ...
T Consensus 159 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~----~~~---------~~~ 222 (260)
T cd05069 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE---VLEQV----ERG---------YRM 222 (260)
T ss_pred ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHH----HcC---------CCC
Confidence 1122345678999999998899999999999999999999 899986543221 11111 111 011
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 042216 714 NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEF 750 (767)
Q Consensus 714 ~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~ 750 (767)
..+...+..+.+++.+||+.+|.+||++++|++.|++
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 223 PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 2233456788999999999999999999999999975
No 139
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=6.3e-36 Score=313.56 Aligned_cols=259 Identities=24% Similarity=0.345 Sum_probs=210.3
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
++|...+.||+|+||.||+|....+++.||+|.++.. .......+.+|++++++++|+|++++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 4688888999999999999999877899999988642 2233567899999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccC--CCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCC
Q 042216 552 DYMARGTLRDHLYNN--DNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPN 629 (767)
Q Consensus 552 ey~~~gsL~~~L~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~ 629 (767)
||+++|+|.+++... ....+++.+++.++.+++.||.||| +.+++|+||||+||+++.++.++|+|||+++....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999998642 3345899999999999999999999 78899999999999999999999999999875432
Q ss_pred CCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccc
Q 042216 630 FSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDP 709 (767)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 709 (767)
.. .......++..|+|||.+.+..++.++|||||||++|||++|+.||..... .+...... ...+.
T Consensus 159 ~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~~-~~~~~------- 224 (267)
T cd08224 159 KT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLYSLCKK-IEKCD------- 224 (267)
T ss_pred CC--cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc----cHHHHHhh-hhcCC-------
Confidence 11 112234578899999999988899999999999999999999999854321 11111111 11111
Q ss_pred cccCCCCh-hhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 042216 710 FLKGNAPP-VCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVF 752 (767)
Q Consensus 710 ~l~~~~~~-~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~ 752 (767)
....+. ..+..+.+++.+||+.+|.+||++.+|+++|+.+.
T Consensus 225 --~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 225 --YPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred --CCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 111122 45667899999999999999999999999998763
No 140
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.7e-36 Score=317.53 Aligned_cols=254 Identities=23% Similarity=0.343 Sum_probs=202.7
Q ss_pred HHhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhcc-ccceeeeEeeeeecC------
Q 042216 472 EATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDD------ 544 (767)
Q Consensus 472 ~~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~------ 544 (767)
.+++.|+..+.||+|+||.||+|...+.++.+|+|++.... ....++.+|+.++.++ +|+|++++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 35667888889999999999999998888999999986543 3455788999999998 799999999998653
Q ss_pred CceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCc
Q 042216 545 GQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLC 624 (767)
Q Consensus 545 ~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla 624 (767)
...+++|||+++|+|.+++.......+++..+..++.|++.||.||| +.+|+|+||||+||++++++.+||+|||++
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~Dfg~~ 158 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVS 158 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEccCCCc
Confidence 45899999999999999997655567899999999999999999999 678999999999999999999999999998
Q ss_pred ccCCCCCCccccccccCCCcccChhhhc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhh
Q 042216 625 KFGPNFSKTHVSTQVKGSIGYLDPEYYR-----LQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYR 699 (767)
Q Consensus 625 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~ 699 (767)
+..... ........|+..|+|||++. ...++.++|||||||++|||++|+.||.......... ...
T Consensus 159 ~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~-------~~~ 229 (272)
T cd06637 159 AQLDRT--VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF-------LIP 229 (272)
T ss_pred eecccc--cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHH-------HHh
Confidence 754321 11223456889999999986 3467889999999999999999999995433211110 001
Q ss_pred cCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 700 NGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 700 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
... .....+..++.++.+++.+||+.+|.+|||+.++++
T Consensus 230 ~~~--------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 230 RNP--------APRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred cCC--------CCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 100 011112234567899999999999999999999975
No 141
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=3.6e-36 Score=318.54 Aligned_cols=246 Identities=25% Similarity=0.346 Sum_probs=197.8
Q ss_pred eeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCCh
Q 042216 483 IGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGTL 559 (767)
Q Consensus 483 LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gsL 559 (767)
||+|+||+||++....+++.+|+|++.... ......+..|+++++.++|+||+++.+++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999998888899999986432 22335678899999999999999999999999999999999999999
Q ss_pred hhhhcc--CCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccc
Q 042216 560 RDHLYN--NDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVST 637 (767)
Q Consensus 560 ~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~ 637 (767)
.+++.. .....+++..++.++.|++.||.||| +.+|+||||||+||++++++.+||+|||+++...... ....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~--~~~~ 155 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ--SKTK 155 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC--cccc
Confidence 988753 23456899999999999999999999 7889999999999999999999999999987543211 1223
Q ss_pred cccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCCh
Q 042216 638 QVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPP 717 (767)
Q Consensus 638 ~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 717 (767)
...|++.|+|||.+.+..++.++|||||||++|||++|+.||......... ....... ... ....+.
T Consensus 156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~--~~~~~~~---------~~~--~~~~~~ 222 (280)
T cd05608 156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN--KELKQRI---------LND--SVTYPD 222 (280)
T ss_pred ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhH--HHHHHhh---------ccc--CCCCcc
Confidence 456899999999999999999999999999999999999999654332111 1111110 000 012234
Q ss_pred hhHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 042216 718 VCLNQFVEVAMSCVNDDRIRRP-----SMSDVVW 746 (767)
Q Consensus 718 ~~~~~l~~li~~Cl~~dp~~RP-----s~~evl~ 746 (767)
..+..+.+++.+||+.||++|| +++++++
T Consensus 223 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 223 KFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 4667889999999999999999 6777774
No 142
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.4e-36 Score=326.66 Aligned_cols=242 Identities=25% Similarity=0.336 Sum_probs=196.8
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhcc-ccceeeeEeeeeecCCceEEEE
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
+|...+.||+|+||.||+|....+++.||+|.+.... ......+..|..++..+ +|++|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4778889999999999999998888899999987542 22334567788888777 5899999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
||+++|+|.+++... ..+++.++..++.|++.||.||| +.+|+||||||+|||+++++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~-- 153 (323)
T cd05616 81 EYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMW-- 153 (323)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEccCCCceecCC--
Confidence 999999999998654 35899999999999999999999 78899999999999999999999999999874321
Q ss_pred CccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccc
Q 042216 632 KTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFL 711 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 711 (767)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+.. . .....
T Consensus 154 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~---~~~~---~-i~~~~--------- 217 (323)
T cd05616 154 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED---ELFQ---S-IMEHN--------- 217 (323)
T ss_pred CCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH---HHHH---H-HHhCC---------
Confidence 111233456899999999999999999999999999999999999999654322 1111 1 11111
Q ss_pred cCCCChhhHHHHHHHHHHccccCCCCCCCH
Q 042216 712 KGNAPPVCLNQFVEVAMSCVNDDRIRRPSM 741 (767)
Q Consensus 712 ~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~ 741 (767)
...+...+.++.+++.+|++.||.+|++.
T Consensus 218 -~~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 218 -VAYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred -CCCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 12234456788999999999999999974
No 143
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2.2e-36 Score=319.69 Aligned_cols=247 Identities=22% Similarity=0.295 Sum_probs=197.5
Q ss_pred eeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCCh
Q 042216 483 IGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGTL 559 (767)
Q Consensus 483 LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gsL 559 (767)
||+|+||.||++..+.+++.+|+|++.... ......+..|++++++++||||+++.+++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999998888999999986431 12233456799999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccccc
Q 042216 560 RDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQV 639 (767)
Q Consensus 560 ~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~ 639 (767)
.+++.......+++..+..++.|++.||.||| +.+++||||||+|||++.++.++|+|||++...... ......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~---~~~~~~ 154 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG---KTITQR 154 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC---ceeecc
Confidence 99987665567999999999999999999999 788999999999999999999999999998754321 122345
Q ss_pred cCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhh
Q 042216 640 KGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVC 719 (767)
Q Consensus 640 ~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 719 (767)
.|+..|+|||++.+..++.++|||||||++|||++|+.||....... .......... ... +. ......
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~--~~~~~~~~~~-~~~--------~~-~~~~~~ 222 (277)
T cd05607 155 AGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV--AKEELKRRTL-EDE--------VK-FEHQNF 222 (277)
T ss_pred CCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh--hHHHHHHHhh-ccc--------cc-cccccC
Confidence 68999999999998889999999999999999999999996443211 1111111111 111 00 011234
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 720 LNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 720 ~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
+.++.+++.+||+.||++||++.|+++.
T Consensus 223 ~~~~~~li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 223 TEESKDICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred CHHHHHHHHHHhccCHhhCCCCccchhh
Confidence 5678999999999999999999776643
No 144
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=6.2e-36 Score=311.98 Aligned_cols=249 Identities=33% Similarity=0.542 Sum_probs=206.1
Q ss_pred eeeccCcEEEEEEEecCC---CceEEEEEeCCCCCcc-hhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCC
Q 042216 482 IIGRGGFGNVYKGFLNGD---STPVAIKRLNPGSQQG-ALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARG 557 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~---~~~vAVK~l~~~~~~~-~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~g 557 (767)
.||+|+||.||++..... +..+++|.+....... .+.+.+|++++..++|+|++++++++......+++|||++++
T Consensus 2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (262)
T cd00192 2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGG 81 (262)
T ss_pred ccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCC
Confidence 699999999999999865 7899999997654333 677899999999999999999999999999999999999999
Q ss_pred ChhhhhccCC-------CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCC
Q 042216 558 TLRDHLYNND-------NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNF 630 (767)
Q Consensus 558 sL~~~L~~~~-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~ 630 (767)
+|.+++.... ...+++.+++.++.|++.||.||| +++++|+||||+||++++++.+||+|||+++.....
T Consensus 82 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 158 (262)
T cd00192 82 DLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDD 158 (262)
T ss_pred cHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEcccccccccccc
Confidence 9999997642 356999999999999999999999 788999999999999999999999999999865443
Q ss_pred CCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccccc
Q 042216 631 SKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDP 709 (767)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 709 (767)
..........++..|+|||.+....++.++||||+||+++||++ |+.||...... .+.. ....+
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~----~~~~~-------- 223 (262)
T cd00192 159 DYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE---EVLE----YLRKG-------- 223 (262)
T ss_pred cccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH---HHHH----HHHcC--------
Confidence 22222334557889999999998899999999999999999999 69998655321 1111 11111
Q ss_pred cccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 042216 710 FLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLE 749 (767)
Q Consensus 710 ~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~ 749 (767)
.....+..++.++.+++.+||+.+|.+||++.|+++.|+
T Consensus 224 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 224 -YRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred -CCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 111234455778999999999999999999999998874
No 145
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=6.6e-36 Score=312.09 Aligned_cols=249 Identities=27% Similarity=0.405 Sum_probs=200.1
Q ss_pred eeeccCcEEEEEEEecCCC---ceEEEEEeCCCCC-cchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCC
Q 042216 482 IIGRGGFGNVYKGFLNGDS---TPVAIKRLNPGSQ-QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARG 557 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~---~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~g 557 (767)
+||+|+||.||+|.....+ ..+|+|.+..... ...+++.+|+++++.+.|+|++++++++. .+..++||||+++|
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~ 80 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPLG 80 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCCC
Confidence 6999999999999875544 6899999876543 24567899999999999999999999886 45789999999999
Q ss_pred ChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc-cc
Q 042216 558 TLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH-VS 636 (767)
Q Consensus 558 sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~-~~ 636 (767)
+|.+++.... .+++..++.++.|++.||.||| ..+++|+||||+|||++.++.+||+|||+++......... ..
T Consensus 81 ~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~ 155 (257)
T cd05060 81 PLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRAT 155 (257)
T ss_pred cHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccc
Confidence 9999996543 6899999999999999999999 7789999999999999999999999999987543222111 11
Q ss_pred ccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCC
Q 042216 637 TQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNA 715 (767)
Q Consensus 637 ~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 715 (767)
....++..|+|||.+....++.++|||||||++|||++ |+.||...... .+..+. .... ....
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~---~~~~~~----~~~~---------~~~~ 219 (257)
T cd05060 156 TAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA---EVIAML----ESGE---------RLPR 219 (257)
T ss_pred cCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH---HHHHHH----HcCC---------cCCC
Confidence 12224568999999998899999999999999999998 99998654321 122211 1111 1123
Q ss_pred ChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 042216 716 PPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVF 752 (767)
Q Consensus 716 ~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~ 752 (767)
+..++..+.+++.+||+.+|.+||++.+|++.|+++.
T Consensus 220 ~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 220 PEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 4456678999999999999999999999999998763
No 146
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.6e-36 Score=328.10 Aligned_cols=242 Identities=26% Similarity=0.378 Sum_probs=196.0
Q ss_pred eeeeccCcEEEEEEEec---CCCceEEEEEeCCC----CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 481 LIIGRGGFGNVYKGFLN---GDSTPVAIKRLNPG----SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 481 ~~LG~G~fG~Vy~g~~~---~~~~~vAVK~l~~~----~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
+.||+|+||.||+++.. ..++.||+|+++.. .......+.+|+++|+.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 47999999999999863 34678999998643 223344578899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+++|+|.+++.+. ..+.+..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++.... ..
T Consensus 82 ~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~--~~ 154 (323)
T cd05584 82 LSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIH--EG 154 (323)
T ss_pred CCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeCcCCeeccc--CC
Confidence 9999999999654 45788899999999999999999 78899999999999999999999999999874321 11
Q ss_pred cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccC
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKG 713 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 713 (767)
.......|++.|+|||++.+..++.++|||||||++|||++|+.||....... .... ...+. .
T Consensus 155 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~------~~~~-~~~~~----------~ 217 (323)
T cd05584 155 TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK------TIDK-ILKGK----------L 217 (323)
T ss_pred CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH------HHHH-HHcCC----------C
Confidence 12234568999999999998889999999999999999999999996543211 1111 11111 1
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 042216 714 NAPPVCLNQFVEVAMSCVNDDRIRRP-----SMSDVVW 746 (767)
Q Consensus 714 ~~~~~~~~~l~~li~~Cl~~dp~~RP-----s~~evl~ 746 (767)
..+...+.++.+++.+||+.+|++|| ++.++++
T Consensus 218 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 218 NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 22344567789999999999999999 7888765
No 147
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.6e-36 Score=327.56 Aligned_cols=236 Identities=25% Similarity=0.366 Sum_probs=193.5
Q ss_pred eeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhcc-ccceeeeEeeeeecCCceEEEEecCCCC
Q 042216 482 IIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDGQMILVYDYMARG 557 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~lV~ey~~~g 557 (767)
+||+|+||.||+++.+.+++.||||++... .......+..|..++..+ +||||+++++++...+..++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g 81 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG 81 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence 699999999999999888899999998643 233445677888888876 6999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccc
Q 042216 558 TLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVST 637 (767)
Q Consensus 558 sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~ 637 (767)
+|.+++.+. ..+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++.... ......
T Consensus 82 ~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~--~~~~~~ 154 (320)
T cd05590 82 DLMFHIQKS--RRFDEARARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIF--NGKTTS 154 (320)
T ss_pred hHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCc--CCCccc
Confidence 999998654 35899999999999999999999 78899999999999999999999999999874321 112233
Q ss_pred cccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCCh
Q 042216 638 QVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPP 717 (767)
Q Consensus 638 ~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 717 (767)
...||+.|+|||++.+..++.++|||||||++|||++|+.||......+ +. .. ...+. ...+.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~---~~---~~-i~~~~----------~~~~~ 217 (320)
T cd05590 155 TFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD---LF---EA-ILNDE----------VVYPT 217 (320)
T ss_pred ccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH---HH---HH-HhcCC----------CCCCC
Confidence 4568999999999999999999999999999999999999996543221 11 11 11111 01233
Q ss_pred hhHHHHHHHHHHccccCCCCCCCH
Q 042216 718 VCLNQFVEVAMSCVNDDRIRRPSM 741 (767)
Q Consensus 718 ~~~~~l~~li~~Cl~~dp~~RPs~ 741 (767)
..+.++.+++.+||+.||.+||++
T Consensus 218 ~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 218 WLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred CCCHHHHHHHHHHcccCHHHCCCC
Confidence 356678999999999999999998
No 148
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=8.6e-36 Score=315.27 Aligned_cols=260 Identities=26% Similarity=0.427 Sum_probs=208.2
Q ss_pred hccccceeeeccCcEEEEEEEecCCCc----eEEEEEeCCCCC-cchhHHHHHHHHHhccccceeeeEeeeeecCCceEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDST----PVAIKRLNPGSQ-QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMIL 549 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~----~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~l 549 (767)
.+|+..+.||+|+||.||+|..+..+. .+|+|.+..... ....++.+|+.++++++|||+++++++|.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 467777899999999999999765433 689998875533 345678999999999999999999999987 78999
Q ss_pred EEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCC
Q 042216 550 VYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPN 629 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~ 629 (767)
|+||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+++|+||||+|||+++++.+||+|||+++....
T Consensus 86 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred EEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---hCCEEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 999999999999997643 34899999999999999999999 78899999999999999999999999999986543
Q ss_pred CCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCcccccc
Q 042216 630 FSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIID 708 (767)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 708 (767)
...........++..|+|||.+....++.++|+||||++++||++ |+.||......+ +.. ....+.
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~----~~~~~~------ 228 (279)
T cd05057 162 DEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE---IPD----LLEKGE------ 228 (279)
T ss_pred cccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH---HHH----HHhCCC------
Confidence 222211122234578999999988899999999999999999998 999986543211 111 111111
Q ss_pred ccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhh
Q 042216 709 PFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQLL 755 (767)
Q Consensus 709 ~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~~ 755 (767)
....+..+...+.+++.+||..+|.+||++.++++.|+.+.+..
T Consensus 229 ---~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05057 229 ---RLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDP 272 (279)
T ss_pred ---CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCC
Confidence 11223345677899999999999999999999999999886544
No 149
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=3.2e-36 Score=326.23 Aligned_cols=243 Identities=25% Similarity=0.340 Sum_probs=196.8
Q ss_pred eeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhcc-ccceeeeEeeeeecCCceEEEEecCCCC
Q 042216 482 IIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDGQMILVYDYMARG 557 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~lV~ey~~~g 557 (767)
+||+|+||+||++....+++.+|+|++.... ....+.+.+|+.++.++ +||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGG 81 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 6999999999999998888999999997542 23345678899999888 6999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccc
Q 042216 558 TLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVST 637 (767)
Q Consensus 558 sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~ 637 (767)
+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++.... ......
T Consensus 82 ~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~--~~~~~~ 154 (327)
T cd05617 82 DLMFHMQRQ--RKLPEEHARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLG--PGDTTS 154 (327)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEeccccceeccC--CCCcee
Confidence 999988543 35999999999999999999999 78899999999999999999999999999874221 112223
Q ss_pred cccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCCh
Q 042216 638 QVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPP 717 (767)
Q Consensus 638 ~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 717 (767)
...||+.|+|||++.+..++.++|||||||+||||++|+.||.............+......... ...+.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~----------~~~p~ 224 (327)
T cd05617 155 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKP----------IRIPR 224 (327)
T ss_pred cccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCC----------CCCCC
Confidence 45689999999999999999999999999999999999999965433222222222222222211 11233
Q ss_pred hhHHHHHHHHHHccccCCCCCCCH
Q 042216 718 VCLNQFVEVAMSCVNDDRIRRPSM 741 (767)
Q Consensus 718 ~~~~~l~~li~~Cl~~dp~~RPs~ 741 (767)
..+.++.+++.+||+.||.+||++
T Consensus 225 ~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 225 FLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred CCCHHHHHHHHHHhccCHHHcCCC
Confidence 455678899999999999999984
No 150
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.6e-36 Score=327.78 Aligned_cols=242 Identities=24% Similarity=0.323 Sum_probs=196.9
Q ss_pred eeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhcc-ccceeeeEeeeeecCCceEEEEecCCCC
Q 042216 482 IIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDGQMILVYDYMARG 557 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~lV~ey~~~g 557 (767)
+||+|+||.||+|+..++++.||+|++... .......+..|.+++..+ +||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 81 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGG 81 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCC
Confidence 699999999999999888889999998753 223345577888888866 7999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccc
Q 042216 558 TLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVST 637 (767)
Q Consensus 558 sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~ 637 (767)
+|..++... ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++..... .....
T Consensus 82 ~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~--~~~~~ 154 (321)
T cd05591 82 DLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN--GVTTT 154 (321)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccceecccC--Ccccc
Confidence 999998654 35899999999999999999999 788999999999999999999999999998753221 12233
Q ss_pred cccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCCh
Q 042216 638 QVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPP 717 (767)
Q Consensus 638 ~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 717 (767)
...||..|+|||++.+..++.++|||||||++|||++|+.||......+ +. ... ..+. ...+.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~---~~---~~i-~~~~----------~~~p~ 217 (321)
T cd05591 155 TFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD---LF---ESI-LHDD----------VLYPV 217 (321)
T ss_pred ccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH---HH---HHH-HcCC----------CCCCC
Confidence 4568999999999999999999999999999999999999996543321 11 111 1111 01233
Q ss_pred hhHHHHHHHHHHccccCCCCCC-------CHHHHHHH
Q 042216 718 VCLNQFVEVAMSCVNDDRIRRP-------SMSDVVWG 747 (767)
Q Consensus 718 ~~~~~l~~li~~Cl~~dp~~RP-------s~~evl~~ 747 (767)
..+.++.+++.+||+.||.+|| ++.++++.
T Consensus 218 ~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 218 WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 3456789999999999999999 77777743
No 151
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=7e-36 Score=313.86 Aligned_cols=257 Identities=27% Similarity=0.444 Sum_probs=205.8
Q ss_pred hccccceeeeccCcEEEEEEEecCC---CceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGD---STPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILV 550 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~---~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV 550 (767)
.+|...+.||+|+||.||+|.+... ...+|+|.++... ......+.+|+.++.+++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 4677888999999999999987533 3479999987543 23345789999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCC
Q 042216 551 YDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNF 630 (767)
Q Consensus 551 ~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~ 630 (767)
|||+++|+|.+++.... ..+++.+++.++.|++.||.||| +.+++||||||+|||++.++.++|+|||+++.....
T Consensus 84 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd05066 84 TEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 159 (267)
T ss_pred EEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---HCCEeehhhchhcEEECCCCeEEeCCCCcccccccc
Confidence 99999999999997543 35899999999999999999999 788999999999999999999999999998865332
Q ss_pred CCcc-ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCcccccc
Q 042216 631 SKTH-VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIID 708 (767)
Q Consensus 631 ~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 708 (767)
.... ......++..|+|||++.+..++.++|+|||||+++|+++ |+.||......+ ..... .++
T Consensus 160 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~---~~~~~----~~~------- 225 (267)
T cd05066 160 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD---VIKAI----EEG------- 225 (267)
T ss_pred cceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH---HHHHH----hCC-------
Confidence 1111 1112234568999999998899999999999999999886 999986543221 11111 111
Q ss_pred ccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 042216 709 PFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFV 751 (767)
Q Consensus 709 ~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~ 751 (767)
.+...+..++..+.+++.+|++.+|.+||+|.++++.|+++
T Consensus 226 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 226 --YRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred --CcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 01112334567789999999999999999999999999875
No 152
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.3e-36 Score=334.47 Aligned_cols=253 Identities=22% Similarity=0.316 Sum_probs=201.1
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
++|+..+.||+|+||+||++....+++.||||++... .......+.+|++++..++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 4688899999999999999999888899999998643 1233456788999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
||+++|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 81 EYLPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred CCCCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEeecccceeccccc
Confidence 999999999999654 35899999999999999999999 7889999999999999999999999999986432111
Q ss_pred Cc------------------------------------cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhC
Q 042216 632 KT------------------------------------HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCA 675 (767)
Q Consensus 632 ~~------------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg 675 (767)
.. .......||+.|+|||++....++.++|||||||++|||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G 235 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence 00 001124589999999999999999999999999999999999
Q ss_pred CCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCC---HHHHHH
Q 042216 676 RPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPS---MSDVVW 746 (767)
Q Consensus 676 ~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs---~~evl~ 746 (767)
+.||......+ .. ....... ..+........++++.+++.+|+. +|.+|++ +.|+++
T Consensus 236 ~~Pf~~~~~~~---~~---~~i~~~~-------~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 236 YPPFCSDNPQE---TY---RKIINWK-------ETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCCCCHHH---HH---HHHHcCC-------CccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 99996543211 11 1111000 001111112345678899999996 8999997 888875
No 153
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1e-35 Score=311.20 Aligned_cols=255 Identities=29% Similarity=0.495 Sum_probs=208.1
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
.++|...+.||+|+||.||++..++ ++.+|||.+.... ....++.+|++++++++|+|++++++++......++||||
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~-~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNG-TTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY 82 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcC-CceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence 4578888899999999999999864 4789999987543 3456799999999999999999999999988999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+++++|.+++.......+++.++..++.+++.||.||| +.+++|+||||+||++++++.+||+|||+++...... .
T Consensus 83 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~-~ 158 (261)
T cd05034 83 MSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDE-Y 158 (261)
T ss_pred cCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECccccceeccchh-h
Confidence 99999999997766567999999999999999999999 7789999999999999999999999999987543211 1
Q ss_pred cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCcccccccccc
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLK 712 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 712 (767)
.......++..|+|||.+.+..++.++||||||++++||++ |+.||....... .... ...+ ..
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~---~~~~----~~~~---------~~ 222 (261)
T cd05034 159 TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE---VLEQ----VERG---------YR 222 (261)
T ss_pred hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHH----HHcC---------CC
Confidence 11122234568999999998899999999999999999998 999996543221 1111 1110 11
Q ss_pred CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 042216 713 GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEF 750 (767)
Q Consensus 713 ~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~ 750 (767)
...+...+.++.+++.+|++.+|.+||++.++++.|+.
T Consensus 223 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 223 MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 12233446789999999999999999999999999874
No 154
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=6.2e-36 Score=314.32 Aligned_cols=257 Identities=22% Similarity=0.381 Sum_probs=206.8
Q ss_pred HHHHhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEE
Q 042216 470 IKEATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMIL 549 (767)
Q Consensus 470 i~~~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~l 549 (767)
++.+++++.....||+|+||.||+|....++..|++|.+........+.+.+|++++++++|+||+++++++..++..++
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 44567778888899999999999999888888999999877666667789999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCC--ChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECC-CCcEEEeecCCccc
Q 042216 550 VYDYMARGTLRDHLYNNDNPPL--PWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDE-EWVAKVSDFGLCKF 626 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~-~~~~ki~DfGla~~ 626 (767)
++||+++++|.+++.... ..+ ++..+..++.|++.||.||| ..+|+||||||+||+++. ++.+||+|||++..
T Consensus 83 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~ 158 (268)
T cd06624 83 FMEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKR 158 (268)
T ss_pred EEecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence 999999999999997542 234 78889999999999999999 788999999999999986 67999999999875
Q ss_pred CCCCCCccccccccCCCcccChhhhccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcc
Q 042216 627 GPNFSKTHVSTQVKGSIGYLDPEYYRLQ--LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIG 704 (767)
Q Consensus 627 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~ 704 (767)
..... .......++..|+|||++... .++.++||||||+++|||++|+.||....... ...+.....
T Consensus 159 ~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~---~~~~~~~~~------ 227 (268)
T cd06624 159 LAGIN--PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQ---AAMFKVGMF------ 227 (268)
T ss_pred cccCC--CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChh---hhHhhhhhh------
Confidence 43211 112234578999999998654 37899999999999999999999986443211 111110000
Q ss_pred ccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 705 DIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 705 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
......+.....++.+++.+||+.+|.+|||+.|++.
T Consensus 228 -----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 228 -----KIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred -----ccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 0111234455677899999999999999999999875
No 155
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=6e-36 Score=319.45 Aligned_cols=263 Identities=24% Similarity=0.390 Sum_probs=204.1
Q ss_pred hccccceeeeccCcEEEEEEEecC----------------CCceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNG----------------DSTPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSL 537 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~----------------~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l 537 (767)
++|+..+.||+|+||.||++...+ ....+|+|++.... .....++.+|++++++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 468888899999999999986432 23469999987543 3345679999999999999999999
Q ss_pred eeeeecCCceEEEEecCCCCChhhhhccCC---------CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCe
Q 042216 538 IGYCNDDGQMILVYDYMARGTLRDHLYNND---------NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNI 608 (767)
Q Consensus 538 ~g~~~~~~~~~lV~ey~~~gsL~~~L~~~~---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NI 608 (767)
++++...+..+++|||+++|+|.+++.... ...+++.++..++.|++.||.||| +.+++|+||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCeecccCChheE
Confidence 999999999999999999999999986532 124788899999999999999999 77899999999999
Q ss_pred EECCCCcEEEeecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCCcc
Q 042216 609 LLDEEWVAKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC--ARPPILRTGDKK 686 (767)
Q Consensus 609 Lld~~~~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt--g~~P~~~~~~~~ 686 (767)
|+++++.++|+|||+++...............++..|+|||....+.++.++|||||||++|||++ |..||......+
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~ 241 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ 241 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH
Confidence 999999999999999875432211111222334678999999888889999999999999999998 778885443322
Q ss_pred chhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 042216 687 QVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLE 749 (767)
Q Consensus 687 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~ 749 (767)
. ............. ......+..++..+.+++.+||+.||.+||++.+|++.|+
T Consensus 242 ~---~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 242 V---IENTGEFFRDQGR------QVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred H---HHHHHHHHhhccc------cccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 1 1111111111100 0111223446678999999999999999999999999886
No 156
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.3e-36 Score=326.10 Aligned_cols=241 Identities=24% Similarity=0.344 Sum_probs=197.1
Q ss_pred eeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhcc-ccceeeeEeeeeecCCceEEEEecCCCC
Q 042216 482 IIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDGQMILVYDYMARG 557 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~lV~ey~~~g 557 (767)
.||+|+||+||++....+++.||||++... .......+..|++++..+ +||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGG 81 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 699999999999999888889999998743 223445677888988887 7999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccc
Q 042216 558 TLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVST 637 (767)
Q Consensus 558 sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~ 637 (767)
+|.+++.+. ..+++.++..++.|++.||.||| +.+|+||||||+|||+++++.+||+|||+++.... ......
T Consensus 82 ~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~--~~~~~~ 154 (318)
T cd05570 82 DLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGIL--GGVTTS 154 (318)
T ss_pred CHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCCCeecCc--CCCccc
Confidence 999988654 35899999999999999999999 78899999999999999999999999999874221 111223
Q ss_pred cccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCCh
Q 042216 638 QVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPP 717 (767)
Q Consensus 638 ~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 717 (767)
...|+..|+|||++.+..++.++|||||||++|||++|+.||....... .. .. ..... ...+.
T Consensus 155 ~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~---~~---~~-i~~~~----------~~~~~ 217 (318)
T cd05570 155 TFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE---LF---QS-ILEDE----------VRYPR 217 (318)
T ss_pred ceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH---HH---HH-HHcCC----------CCCCC
Confidence 3568999999999999999999999999999999999999996443211 11 11 11111 11233
Q ss_pred hhHHHHHHHHHHccccCCCCCCCH-----HHHHH
Q 042216 718 VCLNQFVEVAMSCVNDDRIRRPSM-----SDVVW 746 (767)
Q Consensus 718 ~~~~~l~~li~~Cl~~dp~~RPs~-----~evl~ 746 (767)
..+..+.+++.+||+.||.+||++ .++++
T Consensus 218 ~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 218 WLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred cCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 456778999999999999999999 77764
No 157
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=5.5e-36 Score=314.46 Aligned_cols=255 Identities=22% Similarity=0.324 Sum_probs=203.3
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
.+|+..+.||+|+||.||+|+...+++.||+|++..........+.+|+.++++++||||+++++++..++..++|+||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 46888889999999999999998888899999997655455567889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
++++|.++++.. .++++.++..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++...... .
T Consensus 89 ~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~--~ 161 (267)
T cd06646 89 GGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI--A 161 (267)
T ss_pred CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcCccceeecccc--c
Confidence 999999998643 46899999999999999999999 7889999999999999999999999999987543211 1
Q ss_pred ccccccCCCcccChhhhc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccc
Q 042216 635 VSTQVKGSIGYLDPEYYR---LQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFL 711 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~---~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 711 (767)
......++..|+|||.+. ...++.++|||||||++|||++|+.|+......+... . .... ....+..
T Consensus 162 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~--~-----~~~~---~~~~~~~ 231 (267)
T cd06646 162 KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF--L-----MSKS---NFQPPKL 231 (267)
T ss_pred ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe--e-----eecC---CCCCCCC
Confidence 122345788999999884 3457889999999999999999999985432211100 0 0000 0000111
Q ss_pred cCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 042216 712 KGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGL 748 (767)
Q Consensus 712 ~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L 748 (767)
. .....+..+.+++.+||+.+|++||+++++++.|
T Consensus 232 ~--~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 232 K--DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred c--cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 1 1123456789999999999999999999998643
No 158
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=3.2e-36 Score=324.59 Aligned_cols=240 Identities=26% Similarity=0.343 Sum_probs=193.8
Q ss_pred eeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhc-cccceeeeEeeeeecCCceEEEEecCCCC
Q 042216 482 IIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQ-LRYLHLVSLIGYCNDDGQMILVYDYMARG 557 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~-l~Hpniv~l~g~~~~~~~~~lV~ey~~~g 557 (767)
.||+|+||+||+|...++++.||||+++... ......+..|..++.. ++||||+++++++.+.+..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g 81 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence 6999999999999998888899999987541 2334456778888876 48999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccc
Q 042216 558 TLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVST 637 (767)
Q Consensus 558 sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~ 637 (767)
+|.+++... ..+++.++..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++..... .....
T Consensus 82 ~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~ 154 (316)
T cd05619 82 DLMFHIQSC--HKFDLPRATFYAAEIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG--DAKTC 154 (316)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCC--CCcee
Confidence 999999653 45899999999999999999999 788999999999999999999999999998742211 11223
Q ss_pred cccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCCh
Q 042216 638 QVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPP 717 (767)
Q Consensus 638 ~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 717 (767)
...||..|+|||++.+..++.++|||||||++|||++|+.||......+ +... ..... ...+.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~---~~~~----i~~~~----------~~~~~ 217 (316)
T cd05619 155 TFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE---LFQS----IRMDN----------PCYPR 217 (316)
T ss_pred eecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH---HHHH----HHhCC----------CCCCc
Confidence 4568999999999999899999999999999999999999996543211 1111 11110 11223
Q ss_pred hhHHHHHHHHHHccccCCCCCCCHH-HHH
Q 042216 718 VCLNQFVEVAMSCVNDDRIRRPSMS-DVV 745 (767)
Q Consensus 718 ~~~~~l~~li~~Cl~~dp~~RPs~~-evl 745 (767)
....++.+++.+||+.||.+||++. +++
T Consensus 218 ~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 218 WLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred cCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 3456788999999999999999997 554
No 159
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=7e-36 Score=312.67 Aligned_cols=253 Identities=23% Similarity=0.349 Sum_probs=205.0
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC-----CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS-----QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMIL 549 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~-----~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~l 549 (767)
++|...+.||+|++|.||++....+++.+|+|.+.... ....+.+.+|++++++++||||+++++++.+++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 46888889999999999999988788999999886432 1233568899999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCC
Q 042216 550 VYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPN 629 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~ 629 (767)
|+||+++++|.+++... ..+++..+..++.|++.||.||| ..+++|+||||+||++++++.++|+|||+++....
T Consensus 82 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 156 (263)
T ss_pred EEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence 99999999999998654 35889999999999999999999 78899999999999999999999999999875432
Q ss_pred CCCccc-cccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccc
Q 042216 630 FSKTHV-STQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIID 708 (767)
Q Consensus 630 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 708 (767)
...... .....++..|+|||.+.+..++.++||||||+++|||++|+.||........ .. ....
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~---~~---~~~~--------- 221 (263)
T cd06625 157 ICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA---IF---KIAT--------- 221 (263)
T ss_pred cccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH---HH---HHhc---------
Confidence 211111 1234578899999999998899999999999999999999999864322111 00 0000
Q ss_pred ccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 709 PFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 709 ~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
.......+......+.+++.+||..+|.+|||+.|+++.
T Consensus 222 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 222 QPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred cCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 011122344566788999999999999999999999864
No 160
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=4.3e-36 Score=326.00 Aligned_cols=252 Identities=24% Similarity=0.305 Sum_probs=198.9
Q ss_pred ccccceeeeccCcEEEEEEEec---CCCceEEEEEeCCC----CCcchhHHHHHHHHHhcc-ccceeeeEeeeeecCCce
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLN---GDSTPVAIKRLNPG----SQQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDGQM 547 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~---~~~~~vAVK~l~~~----~~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~ 547 (767)
+|+..+.||+|+||.||+++.. ..++.||+|++... .....+.+..|++++..+ +|+||+++++++..++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4778889999999999998864 34678999998643 122344678899999999 589999999999999999
Q ss_pred EEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccC
Q 042216 548 ILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFG 627 (767)
Q Consensus 548 ~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~ 627 (767)
++||||+++|+|.+++.+. ..+++.++..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 81 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence 9999999999999999654 35899999999999999999999 788999999999999999999999999998754
Q ss_pred CCCCCccccccccCCCcccChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccc
Q 042216 628 PNFSKTHVSTQVKGSIGYLDPEYYRLQ-LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDI 706 (767)
Q Consensus 628 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 706 (767)
..... .......||..|+|||++.+. .++.++|||||||++|||++|+.||......... ...... ...
T Consensus 156 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~--~~~~~~-~~~------ 225 (332)
T cd05614 156 LSEEK-ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQ--SEVSRR-ILK------ 225 (332)
T ss_pred cccCC-CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCH--HHHHHH-Hhc------
Confidence 22111 122345699999999999865 4788999999999999999999999644332111 111111 111
Q ss_pred ccccccCCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 042216 707 IDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRP-----SMSDVVW 746 (767)
Q Consensus 707 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RP-----s~~evl~ 746 (767)
.....+...+..+.+++.+||+.||++|| +++++++
T Consensus 226 ----~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 226 ----CDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred ----CCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 01122334566788999999999999999 7778874
No 161
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=2.3e-36 Score=319.89 Aligned_cols=263 Identities=27% Similarity=0.416 Sum_probs=207.1
Q ss_pred hccccceeeeccCcEEEEEEEecC----CCceEEEEEeCCCCCc-chhHHHHHHHHHhccccceeeeEeeeeec--CCce
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNG----DSTPVAIKRLNPGSQQ-GALEFQTEIGMLSQLRYLHLVSLIGYCND--DGQM 547 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~----~~~~vAVK~l~~~~~~-~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~--~~~~ 547 (767)
.+|...+.||+|+||.||++++.. .+..+|||.+...... ...+|.+|+++++.++|+||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 356667789999999999998753 3578999999765443 46679999999999999999999999977 5578
Q ss_pred EEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccC
Q 042216 548 ILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFG 627 (767)
Q Consensus 548 ~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~ 627 (767)
+++|||+++++|.+++.... ..+++..+..++.|++.||+||| +.+++|+||||+||+++.++.++|+|||++...
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred EEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 99999999999999996543 25999999999999999999999 788999999999999999999999999999865
Q ss_pred CCCCCc-cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccch---------hHHHHHHHH
Q 042216 628 PNFSKT-HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQV---------NLAVWATEC 697 (767)
Q Consensus 628 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~---------~l~~~~~~~ 697 (767)
...... .......++..|+|||.+....++.++||||||++++||++|+.|+......... ....+. ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 238 (284)
T cd05038 160 PEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL-EL 238 (284)
T ss_pred ccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHH-HH
Confidence 422111 1112234556799999999889999999999999999999999997543221100 011111 11
Q ss_pred hhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 042216 698 YRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFV 751 (767)
Q Consensus 698 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~ 751 (767)
. ....+...+..++.++.+++.+||+.+|.+||++.||+++|+++
T Consensus 239 ~---------~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 239 L---------KEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred H---------HcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 1 11111222345567899999999999999999999999999876
No 162
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=7.6e-36 Score=348.61 Aligned_cols=264 Identities=23% Similarity=0.311 Sum_probs=208.2
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC---cchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ---QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
++|+..++||+|+||.||+|.....++.||+|++..... ...++|.+|++++++++||||+++++++.+++..+++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 468888999999999999999988889999999875422 23456899999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccC---------CCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecC
Q 042216 552 DYMARGTLRDHLYNN---------DNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFG 622 (767)
Q Consensus 552 ey~~~gsL~~~L~~~---------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfG 622 (767)
||+++|+|.+++... ....+++..++.++.|+++||+||| +.+|+||||||+|||++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH---HCCccccCCchheEEEcCCCCEEEEecC
Confidence 999999999988532 1234678889999999999999999 7889999999999999999999999999
Q ss_pred CcccCCCCCC----------------ccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCcc
Q 042216 623 LCKFGPNFSK----------------THVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKK 686 (767)
Q Consensus 623 la~~~~~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~ 686 (767)
+++....... ........||+.|||||++.+..++.++|||||||++|||++|+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9975411100 001123468999999999999999999999999999999999999996532211
Q ss_pred chhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCC-CHHHHHHHHHHhHhhh
Q 042216 687 QVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRP-SMSDVVWGLEFVFQLL 755 (767)
Q Consensus 687 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RP-s~~evl~~L~~~~~~~ 755 (767)
... .. .+.++.-. ......+..+.+++.+|++.||++|| +++++++.|+..++..
T Consensus 239 i~~-----~~--------~i~~P~~~-~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~ 294 (932)
T PRK13184 239 ISY-----RD--------VILSPIEV-APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGS 294 (932)
T ss_pred hhh-----hh--------hccChhhc-cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcC
Confidence 100 00 00010000 00123456788999999999999995 6788888888877643
No 163
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.5e-36 Score=330.00 Aligned_cols=259 Identities=20% Similarity=0.202 Sum_probs=198.2
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
.+|...+.||+|+||.||++.....++.||+|... ...+.+|+++|++++||||+++++++..+...++|+|++
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~ 165 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY 165 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence 57999999999999999999998888999999753 235688999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
. ++|.+++... ..+++.+++.++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 166 ~-~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~-~~ 238 (391)
T PHA03212 166 K-TDLYCYLAAK--RNIAICDILAIERSVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN-AN 238 (391)
T ss_pred C-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeCCccccccccc-cc
Confidence 6 6898888544 35899999999999999999999 7789999999999999999999999999987532211 11
Q ss_pred ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCcc-----chhHHHHHHHHhh--cC------
Q 042216 635 VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKK-----QVNLAVWATECYR--NG------ 701 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~-----~~~l~~~~~~~~~--~~------ 701 (767)
......||+.|+|||++.+..++.++|||||||++|||++|+.|+....... ...+.......-. ..
T Consensus 239 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~ 318 (391)
T PHA03212 239 KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQ 318 (391)
T ss_pred ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchh
Confidence 2234579999999999999999999999999999999999998875432110 0111111000000 00
Q ss_pred -Ccccc---------ccccccCC--CChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 702 -KIGDI---------IDPFLKGN--APPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 702 -~~~~~---------~d~~l~~~--~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.+... ..+..+.. .....+.++.+++.+||+.||.+|||++|+++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 319 ANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00000 00000000 00123557889999999999999999999985
No 164
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.2e-35 Score=308.67 Aligned_cols=246 Identities=28% Similarity=0.459 Sum_probs=199.0
Q ss_pred eeeccCcEEEEEEEecCCCceEEEEEeCCCCCc-chhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCChh
Q 042216 482 IIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQ-GALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGTLR 560 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~-~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gsL~ 560 (767)
+||+|+||.||+|... +++.+|+|.+...... ....+.+|++++++++||||++++++|...+..++||||+++|+|.
T Consensus 2 ~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 2 LLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred ccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 6899999999999876 4578999998765432 3346889999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcccccccc
Q 042216 561 DHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQVK 640 (767)
Q Consensus 561 ~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~~ 640 (767)
+++.... ..+++.+++.++.|++.+|.||| +++++|+||||+||++++++.+||+|||++....... ........
T Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~ 155 (250)
T cd05085 81 SFLRKKK-DELKTKQLVKFALDAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGI-YSSSGLKQ 155 (250)
T ss_pred HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccceeccccc-cccCCCCC
Confidence 9986543 35899999999999999999999 7889999999999999999999999999987432211 11112223
Q ss_pred CCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhh
Q 042216 641 GSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVC 719 (767)
Q Consensus 641 gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 719 (767)
++..|+|||++....++.++||||||+++||+++ |..||....... .. .....+ .+...+..+
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~---~~----~~~~~~---------~~~~~~~~~ 219 (250)
T cd05085 156 IPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ---AR----EQVEKG---------YRMSCPQKC 219 (250)
T ss_pred CcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH---HH----HHHHcC---------CCCCCCCCC
Confidence 4678999999998899999999999999999998 999986543211 11 111111 111223445
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 042216 720 LNQFVEVAMSCVNDDRIRRPSMSDVVWGLE 749 (767)
Q Consensus 720 ~~~l~~li~~Cl~~dp~~RPs~~evl~~L~ 749 (767)
+.++.+++.+||+.+|++||++.|+++.|.
T Consensus 220 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 220 PDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 678999999999999999999999999875
No 165
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=6.3e-36 Score=329.95 Aligned_cols=264 Identities=23% Similarity=0.243 Sum_probs=200.2
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeecCC-----ceE
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDG-----QMI 548 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~-----~~~ 548 (767)
+|+..+.||+|+||.||++....+++.||||++... .....+++.+|+++++.++|+||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 477888999999999999998878899999998643 2234457889999999999999999999998776 789
Q ss_pred EEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCC
Q 042216 549 LVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGP 628 (767)
Q Consensus 549 lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~ 628 (767)
+|+||+. ++|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 81 lv~e~~~-~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLARVEE 154 (372)
T ss_pred EEeeccc-cCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEeccccceeecc
Confidence 9999997 5888887443 46899999999999999999999 7889999999999999999999999999997543
Q ss_pred CCCCccccccccCCCcccChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHH--------------
Q 042216 629 NFSKTHVSTQVKGSIGYLDPEYYRLQ-LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVW-------------- 693 (767)
Q Consensus 629 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~-------------- 693 (767)
... ........++..|+|||.+.+. .++.++|||||||++|||++|+.||..............
T Consensus 155 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 233 (372)
T cd07853 155 PDE-SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSAC 233 (372)
T ss_pred cCc-cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhh
Confidence 211 1122334578899999998764 579999999999999999999999965543221111100
Q ss_pred --HHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 694 --ATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 694 --~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
....+..... ................+++.+++.+||+.||.+|||+.|+++.
T Consensus 234 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 234 EGARAHILRGPH-KPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHHHHHhCCC-CCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 0000000000 0000000001122345678999999999999999999999853
No 166
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=7.7e-36 Score=311.09 Aligned_cols=251 Identities=21% Similarity=0.328 Sum_probs=206.3
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC-CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG-SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
+|+..+.||+|+||.||+++...+++.+|+|.+... .....+.+.+|+.++++++|+|++++++.+..++..+++|||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 467788999999999999999888899999998643 3334567889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
++|+|.+++.......+++..++.++.|++.||.||| +++|+|+||||+||++++++.++|+|||+++..... ..
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~--~~ 155 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP--GA 155 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEcccCcceeeccc--cc
Confidence 9999999987655566899999999999999999999 788999999999999999999999999998754321 11
Q ss_pred ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCC
Q 042216 635 VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGN 714 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 714 (767)
......++..|+|||++.+..++.++|+||||+++|+|++|+.||...... ..... ...+... .
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~------~~~~~-~~~~~~~---------~ 219 (255)
T cd08219 156 YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWK------NLILK-VCQGSYK---------P 219 (255)
T ss_pred ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHH------HHHHH-HhcCCCC---------C
Confidence 223456888999999999889999999999999999999999999643221 11111 1111111 1
Q ss_pred CChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 715 APPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 715 ~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
.+...+..+.+++.+||+.||.+||++.+++..
T Consensus 220 ~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 220 LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 233455678899999999999999999999864
No 167
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=9.6e-36 Score=323.60 Aligned_cols=262 Identities=25% Similarity=0.434 Sum_probs=207.8
Q ss_pred hccccceeeeccCcEEEEEEEecCC-------CceEEEEEeCCCC-CcchhHHHHHHHHHhcc-ccceeeeEeeeeecCC
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGD-------STPVAIKRLNPGS-QQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDG 545 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~-------~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~ 545 (767)
.+|...+.||+|+||.||++...+. ...||+|.+.... ....+++.+|++++.++ +||||++++++|...+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 3577888999999999999976321 2368999887542 33456789999999999 7999999999999999
Q ss_pred ceEEEEecCCCCChhhhhccCC--------------CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEEC
Q 042216 546 QMILVYDYMARGTLRDHLYNND--------------NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLD 611 (767)
Q Consensus 546 ~~~lV~ey~~~gsL~~~L~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld 611 (767)
..++++||+++|+|.+++.+.. ...++|.+++.++.|++.||.||| +++++||||||+|||++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA---SQKCIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEc
Confidence 9999999999999999986432 235889999999999999999999 78899999999999999
Q ss_pred CCCcEEEeecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhH
Q 042216 612 EEWVAKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNL 690 (767)
Q Consensus 612 ~~~~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l 690 (767)
+++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||......+
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---- 244 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE---- 244 (334)
T ss_pred CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH----
Confidence 999999999999875433221111222334567999999999999999999999999999998 888885443211
Q ss_pred HHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhh
Q 042216 691 AVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQLL 755 (767)
Q Consensus 691 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~~ 755 (767)
+... ...+ .....+..++.++.+++.+||+.+|.+||++.|+++.|+.+....
T Consensus 245 --~~~~-~~~~---------~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 245 --LFKL-LKEG---------HRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred --HHHH-HHcC---------CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 1111 1111 111223455678999999999999999999999999999887544
No 168
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.1e-36 Score=333.10 Aligned_cols=255 Identities=24% Similarity=0.299 Sum_probs=202.8
Q ss_pred HhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEE
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMIL 549 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~l 549 (767)
..++|+..+.||+|+||.||+++...+++.+|+|++... .......+.+|+.+++.++||||+++++++.+++..++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 356799999999999999999999888899999998642 22334457889999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCC
Q 042216 550 VYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPN 629 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~ 629 (767)
||||+++|+|.+++... .+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++....
T Consensus 121 v~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 121 VMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 99999999999998543 4788889999999999999999 78899999999999999999999999999875432
Q ss_pred CCCccccccccCCCcccChhhhccC----CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccc
Q 042216 630 FSKTHVSTQVKGSIGYLDPEYYRLQ----LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGD 705 (767)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~ 705 (767)
... .......||+.|+|||.+... .++.++|||||||++|||++|+.||....... ..........
T Consensus 195 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~------~~~~i~~~~~--- 264 (370)
T cd05596 195 NGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG------TYSKIMDHKN--- 264 (370)
T ss_pred CCc-ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH------HHHHHHcCCC---
Confidence 111 122345699999999998653 47899999999999999999999996543211 1111111100
Q ss_pred cccccccCCCChhhHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 042216 706 IIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIR--RPSMSDVVWG 747 (767)
Q Consensus 706 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~--RPs~~evl~~ 747 (767)
.+........+.++.+++.+|++.+|.+ ||++.|++..
T Consensus 265 ----~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 265 ----SLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred ----cCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 0111112235678899999999999988 9999999743
No 169
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=3.2e-36 Score=316.43 Aligned_cols=249 Identities=27% Similarity=0.435 Sum_probs=199.2
Q ss_pred eeeccCcEEEEEEEecCCC------ceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 482 IIGRGGFGNVYKGFLNGDS------TPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~------~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
.||+|+||.||+|+..+.. +.+|+|.+.... .....++.+|+++++.++||||++++++|...+..++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 6899999999999876432 579999886543 234567899999999999999999999999999999999999
Q ss_pred CCCChhhhhccC-----CCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCC-----cEEEeecCCc
Q 042216 555 ARGTLRDHLYNN-----DNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEW-----VAKVSDFGLC 624 (767)
Q Consensus 555 ~~gsL~~~L~~~-----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~-----~~ki~DfGla 624 (767)
++|+|.+++... ....+++.+++.++.|++.||.||| +.+++|+||||+||+++.+. .++|+|||++
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 999999999653 2234889999999999999999999 77899999999999999877 8999999998
Q ss_pred ccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCc
Q 042216 625 KFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKI 703 (767)
Q Consensus 625 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~ 703 (767)
+...............++..|+|||++.+..++.++|||||||++|||++ |+.||...... ..... ...+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~---~~~~~----~~~~-- 229 (269)
T cd05044 159 RDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ---EVLQH----VTAG-- 229 (269)
T ss_pred cccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH---HHHHH----HhcC--
Confidence 75432222122223345678999999999999999999999999999998 99998543321 11111 1111
Q ss_pred cccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 042216 704 GDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLE 749 (767)
Q Consensus 704 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~ 749 (767)
.....+...+..+.+++.+||+.+|.+||++.+|++.|+
T Consensus 230 -------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 230 -------GRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred -------CccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 011223345678899999999999999999999999986
No 170
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=8.8e-36 Score=316.46 Aligned_cols=251 Identities=22% Similarity=0.313 Sum_probs=203.4
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC---cchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ---QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
|+..++||+|+||.||++.....++.+|+|.+..... .....+.+|+.++.+++|+|++++++.+.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 6677889999999999999998889999999865422 2234577899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+++|+|.+++.......+++.++..++.|++.||.||| +.+|+||||||+||++++++.++|+|||++.......
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 156 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-- 156 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc--
Confidence 99999999986655556999999999999999999999 7889999999999999999999999999987543211
Q ss_pred cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccC
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKG 713 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 713 (767)
......|+..|+|||++.+..++.++|||||||++|||++|+.||............ ...... ...
T Consensus 157 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~---~~~~~~----------~~~ 222 (285)
T cd05630 157 -TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV---ERLVKE----------VQE 222 (285)
T ss_pred -cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHH---Hhhhhh----------hhh
Confidence 122346899999999999999999999999999999999999999654322111000 000000 011
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 042216 714 NAPPVCLNQFVEVAMSCVNDDRIRRPS-----MSDVVW 746 (767)
Q Consensus 714 ~~~~~~~~~l~~li~~Cl~~dp~~RPs-----~~evl~ 746 (767)
..+......+.+++.+||+.||.+||| +.|+++
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 223 EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 123345567899999999999999999 888886
No 171
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.2e-36 Score=330.01 Aligned_cols=253 Identities=23% Similarity=0.276 Sum_probs=203.3
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
++|...+.||+|+||+||++.....++.||+|+++... ......+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36888899999999999999998888999999987532 234456889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
||+++|+|.+++.+.. ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 81 e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 81 EYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred CCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEcccCchHheEECCCCCEEeccCCCCeECCCCC
Confidence 9999999999996542 36899999999999999999999 7889999999999999999999999999997643321
Q ss_pred CccccccccCCCcccChhhhc------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccc
Q 042216 632 KTHVSTQVKGSIGYLDPEYYR------LQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGD 705 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~------~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~ 705 (767)
. .......||+.|+|||++. ...++.++|||||||++|||++|+.||......+ ..........
T Consensus 157 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~------~~~~i~~~~~--- 226 (330)
T cd05601 157 M-VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK------TYNNIMNFQR--- 226 (330)
T ss_pred c-eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH------HHHHHHcCCC---
Confidence 1 1223456899999999986 4567899999999999999999999996543221 1111111111
Q ss_pred cccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 706 IIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 706 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.+........+..+.+++..|++ +|.+||++.+++.
T Consensus 227 ----~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 227 ----FLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred ----ccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 01111122356778899999998 9999999999884
No 172
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.1e-35 Score=312.57 Aligned_cols=253 Identities=23% Similarity=0.303 Sum_probs=193.3
Q ss_pred eeeccCcEEEEEEEecCC--CceEEEEEeCCCCC-cchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCC
Q 042216 482 IIGRGGFGNVYKGFLNGD--STPVAIKRLNPGSQ-QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGT 558 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~--~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gs 558 (767)
.||+|+||.||+|...++ ...+|+|.++.... .....+.+|+.++++++||||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 589999999999987543 35799998875532 334578899999999999999999999999999999999999999
Q ss_pred hhhhhccCC---CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccc
Q 042216 559 LRDHLYNND---NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHV 635 (767)
Q Consensus 559 L~~~L~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~ 635 (767)
|.++++... ...+++..+..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||+++..........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~ 158 (269)
T cd05087 82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVT 158 (269)
T ss_pred HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccccccCcceeec
Confidence 999996532 234678888899999999999999 78899999999999999999999999999875332221112
Q ss_pred cccccCCCcccChhhhccC-------CCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccc
Q 042216 636 STQVKGSIGYLDPEYYRLQ-------LLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDII 707 (767)
Q Consensus 636 ~~~~~gt~~y~aPE~~~~~-------~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 707 (767)
.....++..|+|||++... .++.++||||||+++|||++ |+.||......+. ... .. .+......
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~---~~~---~~-~~~~~~~~ 231 (269)
T cd05087 159 PDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV---LTY---TV-REQQLKLP 231 (269)
T ss_pred CCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH---HHH---Hh-hcccCCCC
Confidence 2234577889999998642 35789999999999999996 9999954433211 111 01 11111122
Q ss_pred cccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 042216 708 DPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLE 749 (767)
Q Consensus 708 d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~ 749 (767)
++.+ .....+.+.+++..|| .+|++|||+.||++.|+
T Consensus 232 ~~~~----~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 232 KPRL----KLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCcc----CCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 2222 1224556788999999 58999999999998875
No 173
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1e-35 Score=315.84 Aligned_cols=251 Identities=24% Similarity=0.313 Sum_probs=202.2
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
|...+.||+|+||+||++....+++.+|+|.+.... ......+.+|+++++.++|+|++++.+++..++..+++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 566788999999999999998888999999986542 12234578899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+++|+|.+++.......+++..+..++.|++.||.||| +.+|+||||||+||++++++.+||+|||++......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~--- 155 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG--- 155 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC---
Confidence 99999999987655557999999999999999999999 788999999999999999999999999998754321
Q ss_pred cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccC
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKG 713 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 713 (767)
.......|+..|+|||++.+..++.++|+|||||++|||++|+.||......... ..+ ........ .
T Consensus 156 ~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~--~~~-~~~~~~~~----------~ 222 (285)
T cd05632 156 ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKR--EEV-DRRVLETE----------E 222 (285)
T ss_pred CcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHH--HHH-HHhhhccc----------c
Confidence 1122346899999999999889999999999999999999999999654322111 111 11111110 1
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 042216 714 NAPPVCLNQFVEVAMSCVNDDRIRRPS-----MSDVVW 746 (767)
Q Consensus 714 ~~~~~~~~~l~~li~~Cl~~dp~~RPs-----~~evl~ 746 (767)
..+...+..+.+++..||+.||++||+ +.+++.
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 223 VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 123345567889999999999999999 566664
No 174
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=2.9e-36 Score=333.22 Aligned_cols=254 Identities=21% Similarity=0.259 Sum_probs=198.8
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
++|...+.||+|+||+||++....+++.||||++... .......+.+|++++.+++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 3688889999999999999999888899999998643 2233456889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
||+++|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 81 EFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 999999999999643 45889999999999999999999 7889999999999999999999999999986321100
Q ss_pred Cc---------------------------------------------cccccccCCCcccChhhhccCCCCchhhHHHHH
Q 042216 632 KT---------------------------------------------HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFG 666 (767)
Q Consensus 632 ~~---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfG 666 (767)
.. .......||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 00 000124689999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCC---CCHHH
Q 042216 667 VVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRR---PSMSD 743 (767)
Q Consensus 667 vvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~R---Ps~~e 743 (767)
|++|||++|+.||......+. + ........ .+.-......+.++.+++.+|++ +|.+| +++.|
T Consensus 236 vil~elltG~~Pf~~~~~~~~--~----~~i~~~~~-------~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~ 301 (377)
T cd05629 236 AIMFECLIGWPPFCSENSHET--Y----RKIINWRE-------TLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHE 301 (377)
T ss_pred hhhhhhhcCCCCCCCCCHHHH--H----HHHHccCC-------ccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHH
Confidence 999999999999965432111 0 01000000 01001111245678899999997 66665 69999
Q ss_pred HHHH
Q 042216 744 VVWG 747 (767)
Q Consensus 744 vl~~ 747 (767)
+++.
T Consensus 302 ~l~h 305 (377)
T cd05629 302 IKSH 305 (377)
T ss_pred HhcC
Confidence 8864
No 175
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=3.9e-36 Score=323.97 Aligned_cols=240 Identities=24% Similarity=0.348 Sum_probs=194.1
Q ss_pred eeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhcc-ccceeeeEeeeeecCCceEEEEecCCCC
Q 042216 482 IIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDGQMILVYDYMARG 557 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~lV~ey~~~g 557 (767)
+||+|+||.||+|+.+..++.||+|.++... ......+..|..++..+ +||||+++++++.+.+..++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g 81 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCC
Confidence 6999999999999999888999999987532 23344567788887754 8999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccc
Q 042216 558 TLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVST 637 (767)
Q Consensus 558 sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~ 637 (767)
+|.+++... ..+++.++..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++.... ......
T Consensus 82 ~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~--~~~~~~ 154 (316)
T cd05620 82 DLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVF--GDNRAS 154 (316)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCCeeccc--CCCcee
Confidence 999998653 45899999999999999999999 78899999999999999999999999999874211 111233
Q ss_pred cccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCCh
Q 042216 638 QVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPP 717 (767)
Q Consensus 638 ~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 717 (767)
...||..|+|||++.+..++.++|||||||++|||++|+.||...... .+.. ..... ....+.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~---~~~~----~~~~~----------~~~~~~ 217 (316)
T cd05620 155 TFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED---ELFE----SIRVD----------TPHYPR 217 (316)
T ss_pred ccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH---HHHH----HHHhC----------CCCCCC
Confidence 456899999999999999999999999999999999999999654321 1111 11111 011233
Q ss_pred hhHHHHHHHHHHccccCCCCCCCHH-HHH
Q 042216 718 VCLNQFVEVAMSCVNDDRIRRPSMS-DVV 745 (767)
Q Consensus 718 ~~~~~l~~li~~Cl~~dp~~RPs~~-evl 745 (767)
....++.+++.+||+.||.+||++. +++
T Consensus 218 ~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 218 WITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 3566788999999999999999985 554
No 176
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.1e-35 Score=310.18 Aligned_cols=249 Identities=25% Similarity=0.399 Sum_probs=201.5
Q ss_pred eeeccCcEEEEEEEecC-CC--ceEEEEEeCCCCC-cchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCC
Q 042216 482 IIGRGGFGNVYKGFLNG-DS--TPVAIKRLNPGSQ-QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARG 557 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~-~~--~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~g 557 (767)
.||+|++|.||+|.+.. ++ ..||||.+..... ...+++.+|++++++++||||+++++.+.. ...++|+||+++|
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~ 80 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLG 80 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCC
Confidence 68999999999998854 22 3699999987655 556789999999999999999999999988 8999999999999
Q ss_pred ChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc-ccc
Q 042216 558 TLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT-HVS 636 (767)
Q Consensus 558 sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~-~~~ 636 (767)
+|.+++.+.....++|..++.++.|++.||+||| +++++|+||||+||+++.++.+||+|||+++........ ...
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 157 (257)
T cd05040 81 SLLDRLRKDALGHFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVME 157 (257)
T ss_pred cHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHH---hCCccccccCcccEEEecCCEEEeccccccccccccccceecc
Confidence 9999997654356899999999999999999999 788999999999999999999999999998865332111 111
Q ss_pred ccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCC
Q 042216 637 TQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNA 715 (767)
Q Consensus 637 ~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 715 (767)
....++..|+|||++....++.++|||||||++|||++ |+.||......+ ... ....... ....
T Consensus 158 ~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~---~~~~~~~---------~~~~ 222 (257)
T cd05040 158 EHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ---ILK---KIDKEGE---------RLER 222 (257)
T ss_pred cCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH---HHH---HHHhcCC---------cCCC
Confidence 23457789999999999999999999999999999998 999985443221 111 1111110 0112
Q ss_pred ChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 042216 716 PPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLE 749 (767)
Q Consensus 716 ~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~ 749 (767)
+...+..+.+++.+||+.+|.+||++.+|++.|.
T Consensus 223 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 223 PEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 2345678999999999999999999999999875
No 177
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=2.7e-36 Score=334.12 Aligned_cols=252 Identities=22% Similarity=0.274 Sum_probs=197.0
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEe
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~e 552 (767)
.|..++.||+|+||+||+|.....++.+|+|++.... ......+.+|++++++++|+||+++++.+.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5788899999999999999998888999999986432 2334568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC-
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS- 631 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~- 631 (767)
|+++|+|.+++.+. ..+++.....++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~ 156 (382)
T cd05625 82 YIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (382)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccc
Confidence 99999999999654 35889999999999999999999 7889999999999999999999999999975321000
Q ss_pred --------------------------------------------CccccccccCCCcccChhhhccCCCCchhhHHHHHH
Q 042216 632 --------------------------------------------KTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGV 667 (767)
Q Consensus 632 --------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGv 667 (767)
.........||+.|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGv 236 (382)
T cd05625 157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 236 (382)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechH
Confidence 000012346899999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCC---HHHH
Q 042216 668 VLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPS---MSDV 744 (767)
Q Consensus 668 vl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs---~~ev 744 (767)
+||||++|+.||......+.. ...... ...+........+.++.+++.+|+ .+|.+|++ +.++
T Consensus 237 il~elltG~~Pf~~~~~~~~~------~~i~~~-------~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei 302 (382)
T cd05625 237 ILYEMLVGQPPFLAQTPLETQ------MKVINW-------QTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEI 302 (382)
T ss_pred HHHHHHhCCCCCCCCCHHHHH------HHHHcc-------CCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHH
Confidence 999999999999654332111 000000 001111111233556777777765 48999987 7777
Q ss_pred HH
Q 042216 745 VW 746 (767)
Q Consensus 745 l~ 746 (767)
++
T Consensus 303 ~~ 304 (382)
T cd05625 303 KA 304 (382)
T ss_pred hc
Confidence 64
No 178
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.4e-35 Score=317.81 Aligned_cols=260 Identities=26% Similarity=0.442 Sum_probs=205.1
Q ss_pred hccccceeeeccCcEEEEEEEecCCCc----eEEEEEeCCCCC-cchhHHHHHHHHHhccccceeeeEeeeeecCCceEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDST----PVAIKRLNPGSQ-QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMIL 549 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~----~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~l 549 (767)
++|...+.||+|+||.||+|+...++. .+|+|.+..... ....++.+|+.+++.++||||++++++|... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 467788899999999999998865544 578898865432 2344688999999999999999999999754 5679
Q ss_pred EEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCC
Q 042216 550 VYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPN 629 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~ 629 (767)
++||+++|+|.+++.... ..+++..++.++.|++.||.||| +++|+|+||||+|||+++++.+||+|||+++....
T Consensus 86 v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 86 VTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161 (303)
T ss_pred eehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHh---hcCeeccccccceeeecCCCceEEccccccccccC
Confidence 999999999999986543 35899999999999999999999 78899999999999999999999999999986433
Q ss_pred CCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCcccccc
Q 042216 630 FSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIID 708 (767)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 708 (767)
...........++..|+|||.+.+..++.++|||||||++|||++ |+.||...... ....+. ..+.
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~---~~~~~~----~~~~------ 228 (303)
T cd05110 162 DEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR---EIPDLL----EKGE------ 228 (303)
T ss_pred cccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHH----HCCC------
Confidence 222111223345678999999998999999999999999999997 89998554321 111111 1111
Q ss_pred ccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhh
Q 042216 709 PFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQLL 755 (767)
Q Consensus 709 ~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~~ 755 (767)
....+..++..+.+++..||..+|++||++.++++.|+.+....
T Consensus 229 ---~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 229 ---RLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred ---CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 11122345667899999999999999999999999999876443
No 179
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-37 Score=312.65 Aligned_cols=268 Identities=22% Similarity=0.295 Sum_probs=209.8
Q ss_pred HhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCC--CCCcchhHHHHHHHHHhccccceeeeEeeeeec-----CC
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNP--GSQQGALEFQTEIGMLSQLRYLHLVSLIGYCND-----DG 545 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~--~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~-----~~ 545 (767)
....|...+.||+|+||.|+.+..+.+++.||||++.. ......++-.+|+++|+.++|+||+.+.+.... -+
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 34456667789999999999999999999999999873 344556778999999999999999999998865 35
Q ss_pred ceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcc
Q 042216 546 QMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCK 625 (767)
Q Consensus 546 ~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~ 625 (767)
..|+|+|+|+. +|.+.++. ++.|+......++.|+++||.|+| +.+|+||||||+|+|++.+...||||||||+
T Consensus 100 DvYiV~elMet-DL~~iik~--~~~L~d~H~q~f~YQiLrgLKyiH---SAnViHRDLKPsNll~n~~c~lKI~DFGLAR 173 (359)
T KOG0660|consen 100 DVYLVFELMET-DLHQIIKS--QQDLTDDHAQYFLYQILRGLKYIH---SANVIHRDLKPSNLLLNADCDLKICDFGLAR 173 (359)
T ss_pred eeEEehhHHhh-HHHHHHHc--CccccHHHHHHHHHHHHHhcchhh---cccccccccchhheeeccCCCEEecccccee
Confidence 78999999955 89998854 345999999999999999999999 7889999999999999999999999999999
Q ss_pred cCCCCCCccccccccCCCcccChhhhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcc
Q 042216 626 FGPNFSKTHVSTQVKGSIGYLDPEYYR-LQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIG 704 (767)
Q Consensus 626 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~ 704 (767)
.........-.+..+.|..|.|||.+. ...|+...||||.||++.||++|++-|.+.+...+..++.-+.....+..+.
T Consensus 174 ~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~ 253 (359)
T KOG0660|consen 174 YLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQ 253 (359)
T ss_pred eccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHH
Confidence 765432333345667889999999875 5689999999999999999999999998776655554443222111111111
Q ss_pred ccc--------cc-------cccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 705 DII--------DP-------FLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 705 ~~~--------d~-------~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
.+- .. .+...+ +......++|+.+||..||.+|+|++|.++.
T Consensus 254 ~i~s~~ar~yi~slp~~p~~~f~~~f-p~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 254 KIRSEKARPYIKSLPQIPKQPFSSIF-PNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HhccHHHHHHHHhCCCCCCCCHHHHc-CCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 111 00 000011 2345668899999999999999999999854
No 180
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=2.3e-36 Score=333.96 Aligned_cols=253 Identities=23% Similarity=0.267 Sum_probs=199.0
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEe
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~e 552 (767)
+|...+.||+|+||.||+++....++.||||++.... ......+.+|+++|++++|+||+++++.+.+++.+++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 6888999999999999999998888999999986431 2234568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC-
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS- 631 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~- 631 (767)
|+++|+|.+++.+. ..+++.....++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~ 156 (376)
T cd05598 82 YIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (376)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccc
Confidence 99999999999654 35888999999999999999999 7889999999999999999999999999975221000
Q ss_pred ----------------------------------------CccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHH
Q 042216 632 ----------------------------------------KTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLE 671 (767)
Q Consensus 632 ----------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~e 671 (767)
.........||+.|||||++.+..++.++|||||||++||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye 236 (376)
T cd05598 157 SKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 236 (376)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeee
Confidence 0000123469999999999999999999999999999999
Q ss_pred HHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCC---CHHHHHHH
Q 042216 672 VLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRP---SMSDVVWG 747 (767)
Q Consensus 672 lltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RP---s~~evl~~ 747 (767)
|++|+.||......+.. ... .... ..+........+.++.+++.+|+ .+|.+|+ ++.++++.
T Consensus 237 ll~G~~Pf~~~~~~~~~------~~i-~~~~------~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 237 MLVGQPPFLADTPAETQ------LKV-INWE------TTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred hhhCCCCCCCCCHHHHH------HHH-hccC------ccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 99999999654432111 000 0000 00111111234556778888876 4999999 88988844
No 181
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=6.5e-36 Score=336.12 Aligned_cols=260 Identities=24% Similarity=0.289 Sum_probs=195.2
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecC--------C
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDD--------G 545 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~--------~ 545 (767)
..+|...+.||+|+||.||+|.....++.||||++.... ....+|+.+|+.++||||+++++++... .
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 357889999999999999999998888899999885432 2345799999999999999998876321 2
Q ss_pred ceEEEEecCCCCChhhhhcc--CCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCC-cEEEeecC
Q 042216 546 QMILVYDYMARGTLRDHLYN--NDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEW-VAKVSDFG 622 (767)
Q Consensus 546 ~~~lV~ey~~~gsL~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~-~~ki~DfG 622 (767)
.+++||||+++ +|.+++.. .....+++..+..++.|++.||.||| +.+|+||||||+|||++.++ .+||+|||
T Consensus 141 ~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 141 FLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred EEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceeeeccc
Confidence 46789999985 77777643 23456899999999999999999999 78899999999999999654 79999999
Q ss_pred CcccCCCCCCccccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHH----
Q 042216 623 LCKFGPNFSKTHVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATEC---- 697 (767)
Q Consensus 623 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~---- 697 (767)
+++...... ......||+.|+|||++.+ ..++.++|||||||+||||++|.+||.+....+. +.......
T Consensus 217 la~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~--~~~i~~~~~~p~ 291 (440)
T PTZ00036 217 SAKNLLAGQ---RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQ--LVRIIQVLGTPT 291 (440)
T ss_pred cchhccCCC---CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHHHhCCCC
Confidence 998543211 1223467899999999865 4689999999999999999999999965543221 11111100
Q ss_pred ----------hhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 698 ----------YRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 698 ----------~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
+..-....+....+....+...+.++.+++.+||+.||.+|||+.|+++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 292 EDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 0000001111111222233345678999999999999999999999983
No 182
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.7e-35 Score=316.00 Aligned_cols=250 Identities=25% Similarity=0.406 Sum_probs=204.8
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
.+|...+.||+|+||.||+|.....++.+++|.+..........+.+|+.+++.++|+|++++++.+......++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 47888889999999999999988778899999997665555677899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
++++|.+++.+ ..+++.++..++.|++.||.||| +.+|+|+||||+|||++.++.+||+|||+++...... .
T Consensus 100 ~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~--~ 171 (296)
T cd06654 100 AGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--S 171 (296)
T ss_pred CCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECccccchhccccc--c
Confidence 99999999854 24889999999999999999999 7889999999999999999999999999987532211 1
Q ss_pred ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCC
Q 042216 635 VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGN 714 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 714 (767)
......+++.|+|||.+.+..++.++|||||||++|||++|+.||........ +.. ....+. + ...
T Consensus 172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~--~~~----~~~~~~------~--~~~ 237 (296)
T cd06654 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA--LYL----IATNGT------P--ELQ 237 (296)
T ss_pred ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh--HHH----HhcCCC------C--CCC
Confidence 12234688899999999988899999999999999999999999964432111 110 111110 0 011
Q ss_pred CChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 715 APPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 715 ~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.+......+.+++.+||..+|++||++.+++.
T Consensus 238 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 238 NPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred CccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 22344567889999999999999999999986
No 183
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=3.3e-36 Score=325.61 Aligned_cols=237 Identities=29% Similarity=0.383 Sum_probs=191.2
Q ss_pred eeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHH-HHhccccceeeeEeeeeecCCceEEEEecCCCC
Q 042216 482 IIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIG-MLSQLRYLHLVSLIGYCNDDGQMILVYDYMARG 557 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~-~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~g 557 (767)
+||+|+||+||+|+...+++.||+|++.... .....++..|.. +++.++||||+++++++.+.+..++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g 81 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGG 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCC
Confidence 6999999999999998888999999986431 223345556655 567899999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccc
Q 042216 558 TLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVST 637 (767)
Q Consensus 558 sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~ 637 (767)
+|.+++.+. ..+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++.... ......
T Consensus 82 ~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~--~~~~~~ 154 (323)
T cd05575 82 ELFFHLQRE--RSFPEPRARFYAAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIE--HSKTTS 154 (323)
T ss_pred CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCCccccc--CCCccc
Confidence 999998653 46899999999999999999999 78899999999999999999999999999875322 112233
Q ss_pred cccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCCh
Q 042216 638 QVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPP 717 (767)
Q Consensus 638 ~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 717 (767)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...... ....... .+. ...++
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~------~~~~~i~-~~~----------~~~~~ 217 (323)
T cd05575 155 TFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTA------EMYDNIL-NKP----------LRLKP 217 (323)
T ss_pred cccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHH------HHHHHHH-cCC----------CCCCC
Confidence 456899999999999999999999999999999999999999654321 1111111 111 01123
Q ss_pred hhHHHHHHHHHHccccCCCCCCCHH
Q 042216 718 VCLNQFVEVAMSCVNDDRIRRPSMS 742 (767)
Q Consensus 718 ~~~~~l~~li~~Cl~~dp~~RPs~~ 742 (767)
..+..+.+++.+||+.||.+||++.
T Consensus 218 ~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 218 NISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 3466789999999999999999885
No 184
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=4.7e-36 Score=330.10 Aligned_cols=255 Identities=24% Similarity=0.307 Sum_probs=200.8
Q ss_pred HhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEE
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMIL 549 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~l 549 (767)
..++|+..+.||+|+||.||++....+++.+|+|.+... .......+.+|+.+++.++||||+++++++.+++..++
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 456899999999999999999999988899999998642 22234457899999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCC
Q 042216 550 VYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPN 629 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~ 629 (767)
||||+++|+|.+++... .+++..+..++.|++.||+||| +++|+||||||+|||+++++.+||+|||+++....
T Consensus 121 v~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~ 194 (370)
T cd05621 121 VMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE 194 (370)
T ss_pred EEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEEecccceeccc
Confidence 99999999999998543 4788999999999999999999 78899999999999999999999999999986432
Q ss_pred CCCccccccccCCCcccChhhhccC----CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccc
Q 042216 630 FSKTHVSTQVKGSIGYLDPEYYRLQ----LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGD 705 (767)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~ 705 (767)
.. ........||+.|+|||++... .++.++|||||||++|||++|+.||......+. .........
T Consensus 195 ~~-~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~------~~~i~~~~~--- 264 (370)
T cd05621 195 TG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGT------YSKIMDHKN--- 264 (370)
T ss_pred CC-ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHH------HHHHHhCCc---
Confidence 11 1112345699999999998754 378899999999999999999999965432111 111111100
Q ss_pred cccccccCCCChhhHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 042216 706 IIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIR--RPSMSDVVWG 747 (767)
Q Consensus 706 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~--RPs~~evl~~ 747 (767)
.+........+..+.+++..|++.++.+ ||++.|+++.
T Consensus 265 ----~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 265 ----SLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred ----ccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 0111111234567788999999865544 8899999864
No 185
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=9.3e-36 Score=314.39 Aligned_cols=239 Identities=25% Similarity=0.396 Sum_probs=188.9
Q ss_pred eeeccCcEEEEEEEecCC------------------------CceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeE
Q 042216 482 IIGRGGFGNVYKGFLNGD------------------------STPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSL 537 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~------------------------~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l 537 (767)
.||+|+||.||+|.+... ...|++|.+.........+|.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 599999999999986321 13589999876544445678899999999999999999
Q ss_pred eeeeecCCceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCC---
Q 042216 538 IGYCNDDGQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEW--- 614 (767)
Q Consensus 538 ~g~~~~~~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~--- 614 (767)
+++|.+....++||||+++|+|..++.+.. ..+++..+..++.|+++||+||| +++|+||||||+|||++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEK-GRVPVAWKITVAQQLASALSYLE---DKNLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---cCCccCCCCCcccEEEeccCccc
Confidence 999999999999999999999999986543 46899999999999999999999 78899999999999997643
Q ss_pred ----cEEEeecCCcccCCCCCCccccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHH-hCCCCCCCCCCccch
Q 042216 615 ----VAKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVL-CARPPILRTGDKKQV 688 (767)
Q Consensus 615 ----~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~ell-tg~~P~~~~~~~~~~ 688 (767)
.+|++|||++..... .....++..|+|||.+.. ..++.++|||||||++|||+ +|+.||......+.
T Consensus 158 ~~~~~~kl~d~g~~~~~~~------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~- 230 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALS------REERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK- 230 (274)
T ss_pred CccceeeecCCcccccccc------ccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH-
Confidence 479999998764221 112346788999998875 56899999999999999995 69999865432211
Q ss_pred hHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 042216 689 NLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGL 748 (767)
Q Consensus 689 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L 748 (767)
..+. ... ...+.....++.+++.+||+.+|.+||++.+|++.|
T Consensus 231 --~~~~----~~~-----------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 231 --ERFY----EKK-----------HRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred --HHHH----Hhc-----------cCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 1111 100 001122234688999999999999999999999877
No 186
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2.2e-35 Score=312.26 Aligned_cols=250 Identities=22% Similarity=0.334 Sum_probs=199.9
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC-CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG-SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
+|+..++||+|+||.||+|....+++.+|+|.+... ......++.+|++++.+++|||++++++++...+..++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 577788999999999999999888899999998654 2334457899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
++|+|..+. .+++..+..++.|++.||.||| +.+|+|+||||+|||++.++.+||+|||++......
T Consensus 82 ~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~---- 148 (279)
T cd06619 82 DGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS---- 148 (279)
T ss_pred CCCChHHhh------cCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc----
Confidence 999997653 3678899999999999999999 788999999999999999999999999998753221
Q ss_pred ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccch-hHHHHHHHHhhcCCccccccccccC
Q 042216 635 VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQV-NLAVWATECYRNGKIGDIIDPFLKG 713 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~d~~l~~ 713 (767)
......++..|+|||++.+..++.++|||||||++|||++|+.||......... ....+.. ...... .+.+
T Consensus 149 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~-- 220 (279)
T cd06619 149 IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQ-CIVDED-----PPVL-- 220 (279)
T ss_pred cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHH-HHhccC-----CCCC--
Confidence 223356889999999999889999999999999999999999999653322111 1111111 111110 0111
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 714 NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 714 ~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
.....+.++.+++.+||+.+|.+||+++|+++.
T Consensus 221 -~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 221 -PVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred -CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 112234578899999999999999999999854
No 187
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=2.3e-35 Score=310.35 Aligned_cols=258 Identities=27% Similarity=0.399 Sum_probs=206.1
Q ss_pred hccccceeeeccCcEEEEEEEecCC---CceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGD---STPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILV 550 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~---~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV 550 (767)
++|...+.||+|+||.||+|...+. ...|+||...... ....+.+.+|+.++++++|||++++++++.+ +..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 4577778999999999999987543 3468999887554 3445679999999999999999999999875 467899
Q ss_pred EecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCC
Q 042216 551 YDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNF 630 (767)
Q Consensus 551 ~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~ 630 (767)
|||+++|+|.+++.... ..+++.+++.++.+++.||.||| +.+++|+||||+|||++.++.+||+|||+++.....
T Consensus 85 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 160 (270)
T cd05056 85 MELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE 160 (270)
T ss_pred EEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccChheEEEecCCCeEEccCceeeecccc
Confidence 99999999999996543 35899999999999999999999 788999999999999999999999999998764332
Q ss_pred CCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccccc
Q 042216 631 SKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDP 709 (767)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 709 (767)
. ........++..|+|||.+....++.++||||||++++||++ |+.||......+. ..+ ...+.
T Consensus 161 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~---~~~----~~~~~------- 225 (270)
T cd05056 161 S-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV---IGR----IENGE------- 225 (270)
T ss_pred c-ceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH---HHH----HHcCC-------
Confidence 1 111222334568999999988889999999999999999986 9999965543211 111 11111
Q ss_pred cccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 042216 710 FLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQL 754 (767)
Q Consensus 710 ~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~ 754 (767)
....+..++.++.+++.+|+..+|.+|||+.++++.|+++...
T Consensus 226 --~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 226 --RLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred --cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 1122345667899999999999999999999999999987643
No 188
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.7e-35 Score=307.59 Aligned_cols=247 Identities=30% Similarity=0.464 Sum_probs=200.2
Q ss_pred eeeccCcEEEEEEEecCCCceEEEEEeCCCCCc-chhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCChh
Q 042216 482 IIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQ-GALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGTLR 560 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~-~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gsL~ 560 (767)
+||+|+||.||++...+ ++.||+|.+...... ...++.+|++++++++|+||+++++++.+....++|+||+++++|.
T Consensus 2 ~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 2 KIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred ccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 68999999999999877 789999998765433 4567999999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcccccccc
Q 042216 561 DHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQVK 640 (767)
Q Consensus 561 ~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~~ 640 (767)
+++.... ..+++..++.++.+++.+|.||| +++++||||||+|||++.++.+||+|||+++...............
T Consensus 81 ~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 156 (251)
T cd05041 81 TFLRKKK-NRLTVKKLLQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQ 156 (251)
T ss_pred HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCc
Confidence 9996543 35889999999999999999999 7889999999999999999999999999987543211111112223
Q ss_pred CCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhh
Q 042216 641 GSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVC 719 (767)
Q Consensus 641 gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 719 (767)
.+..|+|||.+.++.++.++|+|||||+++||++ |..||....... .... .... .....+...
T Consensus 157 ~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~---~~~~----~~~~---------~~~~~~~~~ 220 (251)
T cd05041 157 IPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ---TRER----IESG---------YRMPAPQLC 220 (251)
T ss_pred ceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH---HHHH----HhcC---------CCCCCCccC
Confidence 4567999999998899999999999999999999 888885543221 1111 1110 111223445
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 042216 720 LNQFVEVAMSCVNDDRIRRPSMSDVVWGLE 749 (767)
Q Consensus 720 ~~~l~~li~~Cl~~dp~~RPs~~evl~~L~ 749 (767)
+.++.+++.+||+.+|.+||++.||++.|+
T Consensus 221 ~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 221 PEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred CHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 678999999999999999999999999886
No 189
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=6.9e-36 Score=316.95 Aligned_cols=263 Identities=24% Similarity=0.422 Sum_probs=204.7
Q ss_pred hccccceeeeccCcEEEEEEEe----cCCCceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecC--Cce
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFL----NGDSTPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDD--GQM 547 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~----~~~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~--~~~ 547 (767)
+.|...+.||+|+||.||++.. ...+..||+|.++... ......+.+|++++++++|||++++.+++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 3467788999999999999985 3346789999987553 33345789999999999999999999998775 568
Q ss_pred EEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccC
Q 042216 548 ILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFG 627 (767)
Q Consensus 548 ~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~ 627 (767)
++||||+++++|.+++.+.. ..++|.+++.++.|++.||+||| +++++||||||+||++++++.+||+|||+++..
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 159 (284)
T ss_pred EEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccchheEEEcCCCCEEECCCcccccc
Confidence 99999999999999986543 35899999999999999999999 788999999999999999999999999998754
Q ss_pred CCCCCc-cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC---------ccchhHHHHHHHH
Q 042216 628 PNFSKT-HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGD---------KKQVNLAVWATEC 697 (767)
Q Consensus 628 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~---------~~~~~l~~~~~~~ 697 (767)
...... .......++..|+|||.+.+..++.++|||||||++|||++++.|...... ........+. ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 238 (284)
T cd05079 160 ETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLV-RV 238 (284)
T ss_pred ccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHH-HH
Confidence 322111 112234567789999999888899999999999999999998776422110 0011111111 11
Q ss_pred hhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 042216 698 YRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFV 751 (767)
Q Consensus 698 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~ 751 (767)
...+. ....+..++.++.+++.+||+.+|.+||++.++++.|+.+
T Consensus 239 ~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 239 LEEGK---------RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHcCc---------cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 11111 1122344677899999999999999999999999999876
No 190
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.7e-35 Score=310.26 Aligned_cols=239 Identities=26% Similarity=0.394 Sum_probs=189.8
Q ss_pred eeeccCcEEEEEEEecCC------------CceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEE
Q 042216 482 IIGRGGFGNVYKGFLNGD------------STPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMIL 549 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~------------~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~l 549 (767)
.||+|+||.||+|+.... ...|++|.+..........|.+|+.++..++||||+++++++..+...++
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l 81 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM 81 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence 589999999999986422 23589998876555555678899999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCc-------EEEeecC
Q 042216 550 VYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWV-------AKVSDFG 622 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~-------~ki~DfG 622 (767)
+|||+++|+|..++.... ..+++..++.++.|+++||+||| +++|+||||||+|||++.++. +|++|||
T Consensus 82 v~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g 157 (262)
T cd05077 82 VEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPG 157 (262)
T ss_pred EEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhh---hCCeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence 999999999999886543 35899999999999999999999 788999999999999987664 8999999
Q ss_pred CcccCCCCCCccccccccCCCcccChhhhc-cCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCCccchhHHHHHHHHhhc
Q 042216 623 LCKFGPNFSKTHVSTQVKGSIGYLDPEYYR-LQLLTEKSDVYSFGVVLLEVL-CARPPILRTGDKKQVNLAVWATECYRN 700 (767)
Q Consensus 623 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~ksDV~SfGvvl~ell-tg~~P~~~~~~~~~~~l~~~~~~~~~~ 700 (767)
++..... .....++..|+|||.+. ...++.++|||||||++|||+ +|+.|+......+.. ... .
T Consensus 158 ~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-------~~~-~ 223 (262)
T cd05077 158 IPITVLS------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-------RFY-E 223 (262)
T ss_pred CCccccC------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-------HHH-h
Confidence 9864321 12234778899999887 467899999999999999998 588887543221110 000 1
Q ss_pred CCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 042216 701 GKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGL 748 (767)
Q Consensus 701 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L 748 (767)
+.. . .......++.+++.+||+.||.+||++.+|++.|
T Consensus 224 ~~~--------~--~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 224 GQC--------M--LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred cCc--------c--CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 100 0 1112346788999999999999999999999876
No 191
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=3e-35 Score=299.69 Aligned_cols=267 Identities=20% Similarity=0.285 Sum_probs=220.8
Q ss_pred HHHHHHHhhccccceeeeccCcEEEEEEEecCCC-----ceEEEEEeCCC-CCcchhHHHHHHHHHhccccceeeeEeee
Q 042216 467 ISEIKEATKDFNNLLIIGRGGFGNVYKGFLNGDS-----TPVAIKRLNPG-SQQGALEFQTEIGMLSQLRYLHLVSLIGY 540 (767)
Q Consensus 467 ~~ei~~~t~~f~~~~~LG~G~fG~Vy~g~~~~~~-----~~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~ 540 (767)
..++.....+++...++-+|.||+||+|.+.+++ +.|-+|.++.. ++.+...+..|..+|..+.|||+.++.+.
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 3344444566777778999999999999776543 45777877644 55566678999999999999999999999
Q ss_pred eecC-CceEEEEecCCCCChhhhhcc------CCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCC
Q 042216 541 CNDD-GQMILVYDYMARGTLRDHLYN------NDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEE 613 (767)
Q Consensus 541 ~~~~-~~~~lV~ey~~~gsL~~~L~~------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~ 613 (767)
|.++ ...+++|.++.-|+|..+|.. +..+.++..+...++.|++.||+||| +.++||.||.++|++||+.
T Consensus 356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh---~~~ViHkDiAaRNCvIdd~ 432 (563)
T KOG1024|consen 356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH---NHGVIHKDIAARNCVIDDQ 432 (563)
T ss_pred EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH---hcCcccchhhhhcceehhh
Confidence 8654 577899999999999999972 22345888899999999999999999 8889999999999999999
Q ss_pred CcEEEeecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHH
Q 042216 614 WVAKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAV 692 (767)
Q Consensus 614 ~~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~ 692 (767)
.++||+|=.++|.....+..........+..||+||.+....|+..+|||||||+||||+| |+.|+...+..+....
T Consensus 433 LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~y-- 510 (563)
T KOG1024|consen 433 LQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHY-- 510 (563)
T ss_pred eeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHH--
Confidence 9999999999997666566655566667889999999999999999999999999999998 9999987766543322
Q ss_pred HHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 042216 693 WATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVF 752 (767)
Q Consensus 693 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~ 752 (767)
+.+| .+-..|-+|++++..+|.-||...|++||+++|++.-|.+-.
T Consensus 511 -----lkdG---------yRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~ 556 (563)
T KOG1024|consen 511 -----LKDG---------YRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFH 556 (563)
T ss_pred -----Hhcc---------ceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 1222 233457789999999999999999999999999999986653
No 192
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1e-35 Score=319.77 Aligned_cols=265 Identities=18% Similarity=0.288 Sum_probs=201.2
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
++|...+.||+|+||.||+|+.+..++.||+|+++... ......+.+|++++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 46888889999999999999998888899999987543 22334678899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+++ +|.+++.... ..+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++......
T Consensus 86 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 158 (309)
T cd07872 86 LDK-DLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT-- 158 (309)
T ss_pred CCC-CHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECccccceecCCCc--
Confidence 985 8888886543 35889999999999999999999 7889999999999999999999999999987532211
Q ss_pred cccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcc------cc
Q 042216 634 HVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIG------DI 706 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~------~~ 706 (767)
.......++..|+|||.+.+ ..++.++|||||||++|||++|++||......+.................. +.
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07872 159 KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEF 238 (309)
T ss_pred cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhh
Confidence 11223457889999998865 568999999999999999999999996554332211111100000000000 00
Q ss_pred ccccccC-------CCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 707 IDPFLKG-------NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 707 ~d~~l~~-------~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.+..... ...+..+.++.+++.+|++.||.+|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 239 KNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 0000000 011234567889999999999999999999986
No 193
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.4e-35 Score=315.07 Aligned_cols=261 Identities=22% Similarity=0.301 Sum_probs=196.7
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC--cchhHHHHHHHHHhcc---ccceeeeEeeeeec-----CC
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ--QGALEFQTEIGMLSQL---RYLHLVSLIGYCND-----DG 545 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~--~~~~~f~~Ei~~l~~l---~Hpniv~l~g~~~~-----~~ 545 (767)
+|+..+.||+|+||.||+|....+++.||+|.+..... .....+.+|+++++.+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 46778899999999999999998889999999875422 2233456777777665 69999999998864 24
Q ss_pred ceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcc
Q 042216 546 QMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCK 625 (767)
Q Consensus 546 ~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~ 625 (767)
..+++|||+++ +|.+++.......+++.++..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccCccc
Confidence 57999999985 8999887655556899999999999999999999 7889999999999999999999999999987
Q ss_pred cCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhc---CC
Q 042216 626 FGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRN---GK 702 (767)
Q Consensus 626 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~---~~ 702 (767)
..... .......++..|+|||++.+..++.++|||||||++|||++|++||....... .+..... .... ..
T Consensus 157 ~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~--~~~~~~~-~~~~~~~~~ 230 (288)
T cd07863 157 IYSCQ---MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD--QLGKIFD-LIGLPPEDD 230 (288)
T ss_pred cccCc---ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH--HHHHHHH-HhCCCChhh
Confidence 54321 12233467899999999998899999999999999999999999986543321 1111111 0000 00
Q ss_pred cc-------cccccccc---CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 703 IG-------DIIDPFLK---GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 703 ~~-------~~~d~~l~---~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.. ....+... ....+....++.+++.+|++.||++|||+.|++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 231 WPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred CcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00 00000000 0111234567889999999999999999999874
No 194
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=9e-36 Score=322.20 Aligned_cols=242 Identities=24% Similarity=0.342 Sum_probs=195.9
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccc-cceeeeEeeeeecCCceEEEE
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLR-YLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~-Hpniv~l~g~~~~~~~~~lV~ 551 (767)
+|+..+.||+|+||.||++....+++.||+|++... .....+.+..|..++..+. |++|+++.+++...+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 467788999999999999999888899999998643 2233456788888888885 577888999999899999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
||+++|+|.+++.+. ..+++.++..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~- 154 (323)
T cd05615 81 EYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD- 154 (323)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeccccccccCCC-
Confidence 999999999998554 35899999999999999999999 788999999999999999999999999998743211
Q ss_pred CccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccc
Q 042216 632 KTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFL 711 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 711 (767)
........||..|+|||++.+..++.++|||||||++|||++|+.||...... .+.. ... ...
T Consensus 155 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~---~~~~---~i~-~~~--------- 217 (323)
T cd05615 155 -GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED---ELFQ---SIM-EHN--------- 217 (323)
T ss_pred -CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH---HHHH---HHH-hCC---------
Confidence 11223456899999999999999999999999999999999999999654321 1111 111 111
Q ss_pred cCCCChhhHHHHHHHHHHccccCCCCCCCH
Q 042216 712 KGNAPPVCLNQFVEVAMSCVNDDRIRRPSM 741 (767)
Q Consensus 712 ~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~ 741 (767)
...+...+.++.+++.+||+.+|.+|++.
T Consensus 218 -~~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 218 -VSYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred -CCCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 12233456678999999999999999974
No 195
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.4e-35 Score=308.51 Aligned_cols=251 Identities=30% Similarity=0.503 Sum_probs=194.7
Q ss_pred eeeccCcEEEEEEEecC---CCceEEEEEeCCC-CCcchhHHHHHHHHHhccccceeeeEeeeee-cCCceEEEEecCCC
Q 042216 482 IIGRGGFGNVYKGFLNG---DSTPVAIKRLNPG-SQQGALEFQTEIGMLSQLRYLHLVSLIGYCN-DDGQMILVYDYMAR 556 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~---~~~~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~-~~~~~~lV~ey~~~ 556 (767)
.||+|+||.||+|...+ ....+|+|++... .......+.+|+.+++.++|||+++++++|. .++..++++||+.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~ 81 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH 81 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence 68999999999998643 2357999998543 2334567889999999999999999999876 45568999999999
Q ss_pred CChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc--c
Q 042216 557 GTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT--H 634 (767)
Q Consensus 557 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~--~ 634 (767)
|+|.+++.+.. ..+++..++.++.|++.||.||| ..+++||||||+|||+++++.+||+|||+++........ .
T Consensus 82 ~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 157 (262)
T cd05058 82 GDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVH 157 (262)
T ss_pred CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccccccccCCcceeec
Confidence 99999996543 34688889999999999999999 778999999999999999999999999998753221110 1
Q ss_pred ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCCccchhHHHHHHHHhhcCCccccccccccC
Q 042216 635 VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCA-RPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKG 713 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg-~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 713 (767)
......++..|+|||.+....++.++|||||||++|||++| .+|+..... ..+... . ..+. ..
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---~~~~~~---~-~~~~---------~~ 221 (262)
T cd05058 158 NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS---FDITVY---L-LQGR---------RL 221 (262)
T ss_pred ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHH---H-hcCC---------CC
Confidence 11223456789999999888999999999999999999995 555543221 111111 1 1111 01
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 042216 714 NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVF 752 (767)
Q Consensus 714 ~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~ 752 (767)
..+..++..+.+++.+||+.+|++||++.||++.|+.+.
T Consensus 222 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 222 LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 112234567899999999999999999999999999875
No 196
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.6e-35 Score=309.83 Aligned_cols=254 Identities=25% Similarity=0.437 Sum_probs=205.0
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
.++|...+.||+|+||.||++...+. ..+|+|.+.... .....+.+|++++++++|+|++++.+++.+ ...+++|||
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~-~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~ 81 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKH-TKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF 81 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCC-ccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence 35678888999999999999987643 679999886542 345678999999999999999999999887 788999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+++|+|.+++.+.....+++.++..++.|++.||.||| ..+++|+||||+||+++.++.+||+|||++....... .
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~-~ 157 (260)
T cd05073 82 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-Y 157 (260)
T ss_pred CCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCCcceeeccCCC-c
Confidence 99999999997765567899999999999999999999 6789999999999999999999999999987543211 1
Q ss_pred cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCcccccccccc
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLK 712 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 712 (767)
.......++..|+|||++....++.++|+|||||+++|+++ |+.||...... .+..+ ...+. .
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~---~~~~~----~~~~~---------~ 221 (260)
T cd05073 158 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP---EVIRA----LERGY---------R 221 (260)
T ss_pred ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH---HHHHH----HhCCC---------C
Confidence 11222345678999999998889999999999999999998 99998654321 11111 11111 1
Q ss_pred CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 042216 713 GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEF 750 (767)
Q Consensus 713 ~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~ 750 (767)
...+...+.++.+++.+||+.+|++||++.++++.|+.
T Consensus 222 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 222 MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred CCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 11223455678999999999999999999999999975
No 197
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2.9e-36 Score=315.10 Aligned_cols=240 Identities=26% Similarity=0.386 Sum_probs=191.9
Q ss_pred eeeccCcEEEEEEEecCCC-------ceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 482 IIGRGGFGNVYKGFLNGDS-------TPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~-------~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
.||+|+||.||+|.....+ ..+++|.+........+++.+|+.+++.++|||++++++++..++..++||||+
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYV 81 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecC
Confidence 6899999999999875433 348888886555555667899999999999999999999999989999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCc--------EEEeecCCccc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWV--------AKVSDFGLCKF 626 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~--------~ki~DfGla~~ 626 (767)
++|+|.++++... ..+++..++.++.|++.||.||| +.+|+||||||+|||++.++. ++++|||++..
T Consensus 82 ~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~ 157 (258)
T cd05078 82 KFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT 157 (258)
T ss_pred CCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence 9999999997543 35899999999999999999999 788999999999999987765 69999998764
Q ss_pred CCCCCCccccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCC-CCCCCCCCccchhHHHHHHHHhhcCCcc
Q 042216 627 GPNFSKTHVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCAR-PPILRTGDKKQVNLAVWATECYRNGKIG 704 (767)
Q Consensus 627 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~-~P~~~~~~~~~~~l~~~~~~~~~~~~~~ 704 (767)
... .....++..|+|||++.+ ..++.++|||||||++|||++|. .|+......... . ....
T Consensus 158 ~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~---~----~~~~---- 220 (258)
T cd05078 158 VLP------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKL---Q----FYED---- 220 (258)
T ss_pred cCC------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHH---H----HHHc----
Confidence 321 123457889999999986 45899999999999999999985 555332221110 0 0110
Q ss_pred ccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 042216 705 DIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLE 749 (767)
Q Consensus 705 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~ 749 (767)
....+.....++.+++.+||+.+|++|||++++++.|+
T Consensus 221 -------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 221 -------RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred -------cccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 11223344567899999999999999999999998873
No 198
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=2.2e-36 Score=326.26 Aligned_cols=239 Identities=25% Similarity=0.316 Sum_probs=193.4
Q ss_pred eeeeccCcEEEEEEEec---CCCceEEEEEeCCCC--CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCC
Q 042216 481 LIIGRGGFGNVYKGFLN---GDSTPVAIKRLNPGS--QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMA 555 (767)
Q Consensus 481 ~~LG~G~fG~Vy~g~~~---~~~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~ 555 (767)
+.||+|+||.||++... ..++.+|+|++.... ......+..|+++|++++||||+++++++..++..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 47999999999998763 456899999986532 2234457789999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccc
Q 042216 556 RGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHV 635 (767)
Q Consensus 556 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~ 635 (767)
+|+|.+++.+. ..+++..+..++.|++.||.||| +.+|+||||||+|||+++++.+||+|||+++..... ...
T Consensus 82 ~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~--~~~ 154 (318)
T cd05582 82 GGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH--EKK 154 (318)
T ss_pred CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC--CCc
Confidence 99999999543 45899999999999999999999 788999999999999999999999999998754321 112
Q ss_pred cccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCC
Q 042216 636 STQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNA 715 (767)
Q Consensus 636 ~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 715 (767)
.....|++.|+|||.+....++.++|||||||++|||++|+.||......+ .. ... .... ...
T Consensus 155 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~---~~---~~i-~~~~----------~~~ 217 (318)
T cd05582 155 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKE---TM---TMI-LKAK----------LGM 217 (318)
T ss_pred eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHH---HH---HHH-HcCC----------CCC
Confidence 234568999999999998889999999999999999999999996443211 11 111 1111 112
Q ss_pred ChhhHHHHHHHHHHccccCCCCCCCHHH
Q 042216 716 PPVCLNQFVEVAMSCVNDDRIRRPSMSD 743 (767)
Q Consensus 716 ~~~~~~~l~~li~~Cl~~dp~~RPs~~e 743 (767)
+...+..+.+++.+||+.||.+||++.+
T Consensus 218 p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 218 PQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 3345677889999999999999999544
No 199
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.9e-35 Score=317.51 Aligned_cols=262 Identities=24% Similarity=0.347 Sum_probs=203.4
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC-cchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ-QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
++|+..+.||+|+||.||++....++..+|+|.+..... ....++.+|++++.+++||||+++++++.+++..++|+||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 368888999999999999999988888999999875432 2345688999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+++++|.+++.+. ..+++..+..++.|+++||.|||+ ..+++|+||||+|||++.++.+||+|||++......
T Consensus 81 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--- 153 (308)
T cd06615 81 MDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 153 (308)
T ss_pred cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCChHHEEEecCCcEEEccCCCccccccc---
Confidence 9999999999654 458999999999999999999994 357999999999999999999999999998753221
Q ss_pred cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcc---------
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIG--------- 704 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~--------- 704 (767)
......++..|+|||.+.+..++.++|||||||++|||++|+.||....... ...+...........
T Consensus 154 -~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 229 (308)
T cd06615 154 -MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE---LEAMFGRPVSEGEAKESHRPVSGH 229 (308)
T ss_pred -ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhh---HHHhhcCccccccccCCcccccCC
Confidence 1233568899999999988889999999999999999999999985433211 111110000000000
Q ss_pred -----------cccccccc---CCCC-hhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 705 -----------DIIDPFLK---GNAP-PVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 705 -----------~~~d~~l~---~~~~-~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
+..+.... ...+ .....++.+++.+||+.+|++||++.+|++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 230 PPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred CCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000000 0001 1245578999999999999999999999866
No 200
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3e-35 Score=329.95 Aligned_cols=263 Identities=19% Similarity=0.181 Sum_probs=199.3
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
..+|...+.||+|+||.||++.+...++.||||... ...+.+|+++|++|+|+||+++++++..++..++|||+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 447888899999999999999999888899999642 23467899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+. ++|.+++.... ..++|.+++.|+.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++........
T Consensus 242 ~~-~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~ 316 (461)
T PHA03211 242 YR-SDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWST 316 (461)
T ss_pred cC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---HCCEEECcCCHHHEEECCCCCEEEcccCCceeccccccc
Confidence 95 69998886533 36999999999999999999999 788999999999999999999999999999864332222
Q ss_pred cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCc-c----chhHHHHHHHHhhc-CCccccc
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDK-K----QVNLAVWATECYRN-GKIGDII 707 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~-~----~~~l~~~~~~~~~~-~~~~~~~ 707 (767)
.......||..|+|||++.+..++.++|||||||+||||++|..|+...... . ...+...+...... .......
T Consensus 317 ~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~ 396 (461)
T PHA03211 317 PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHA 396 (461)
T ss_pred ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCc
Confidence 2223456999999999999999999999999999999999988776433211 1 11111111111000 0000000
Q ss_pred cccc------------cCCCC-------hhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 708 DPFL------------KGNAP-------PVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 708 d~~l------------~~~~~-------~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
...+ ..... ......+.+|+.+||+.||.+|||+.|+++.
T Consensus 397 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 397 GSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred chHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0000 00000 0123467899999999999999999999863
No 201
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.5e-35 Score=309.89 Aligned_cols=253 Identities=24% Similarity=0.318 Sum_probs=191.5
Q ss_pred eeeccCcEEEEEEEecCC--CceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCC
Q 042216 482 IIGRGGFGNVYKGFLNGD--STPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGT 558 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~--~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gs 558 (767)
.||+|+||.||+|..... ...+++|.+.... .....+|.+|++.++.++|+||+++++.|......++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 589999999999976432 3468889876443 2334568899999999999999999999999999999999999999
Q ss_pred hhhhhccCCC---CCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccc
Q 042216 559 LRDHLYNNDN---PPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHV 635 (767)
Q Consensus 559 L~~~L~~~~~---~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~ 635 (767)
|.+++..... ...++.....++.|++.||+||| +.+|+||||||+|||+++++.+||+|||+++..........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHH---hcCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 9999965432 23578888999999999999999 78899999999999999999999999999864322111111
Q ss_pred cccccCCCcccChhhhcc-------CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccc
Q 042216 636 STQVKGSIGYLDPEYYRL-------QLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDII 707 (767)
Q Consensus 636 ~~~~~gt~~y~aPE~~~~-------~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 707 (767)
.....++..|+|||++.. ..++.++|||||||++|||++ |+.||....+.+ .+ ...... ....+.
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--~~----~~~~~~-~~~~~~ 231 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ--VL----KQVVRE-QDIKLP 231 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH--HH----HHHhhc-cCccCC
Confidence 223345678999998753 356889999999999999999 788885443221 11 111111 111222
Q ss_pred cccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 042216 708 DPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLE 749 (767)
Q Consensus 708 d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~ 749 (767)
++. .+...+..+.+++..|| .||.+||++++|++.|.
T Consensus 232 ~~~----~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 232 KPQ----LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCc----ccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 222 23345567788899998 59999999999998873
No 202
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-36 Score=310.61 Aligned_cols=261 Identities=24% Similarity=0.278 Sum_probs=197.7
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecC---C--ceEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDD---G--QMIL 549 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~---~--~~~l 549 (767)
-.|...+++|.|+||.||+|++......||||+...+.+- -.+|+++|+++.|||||+|+-++... + ...|
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl 99 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL 99 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence 3577778999999999999999988899999998654332 24689999999999999999887532 2 4568
Q ss_pred EEecCCCCChhhhhcc--CCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCC-CcEEEeecCCccc
Q 042216 550 VYDYMARGTLRDHLYN--NDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEE-WVAKVSDFGLCKF 626 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~-~~~ki~DfGla~~ 626 (767)
|||||+. +|.+.++. ..+..++...+.-+..|+.+||.||| +.+|+||||||+|+|+|.+ |.+||||||.|+.
T Consensus 100 VleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 100 VLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDFGSAKV 175 (364)
T ss_pred HHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccCCccee
Confidence 9999998 99998864 23456888888899999999999999 7889999999999999965 9999999999997
Q ss_pred CCCCCCccccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcc-
Q 042216 627 GPNFSKTHVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIG- 704 (767)
Q Consensus 627 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~- 704 (767)
...... ...-..|..|.|||.+.+ ..|+.+.||||.|||+.||+-|++-|.+.....+...+.-+.......++.
T Consensus 176 L~~~ep---niSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~ 252 (364)
T KOG0658|consen 176 LVKGEP---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKS 252 (364)
T ss_pred eccCCC---ceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhh
Confidence 543222 233346778999999875 589999999999999999999999997755433322221111110000000
Q ss_pred ------ccccccccC-----CCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 705 ------DIIDPFLKG-----NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 705 ------~~~d~~l~~-----~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
+.-.+.+.. ........+.++++.++++.+|.+|.++.|++.
T Consensus 253 mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 253 MNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred cCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 111111111 123345678899999999999999999999984
No 203
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-36 Score=310.08 Aligned_cols=247 Identities=22% Similarity=0.355 Sum_probs=207.0
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
.+|+..+.||+|.||+|-++.....++.||||.++++. ++..-.+.+||++|+.|+||||++++.+++..+...+||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 35666678999999999999987788999999997663 344445789999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
||..+|.|.+|+.+. ..|++.+...++.||..|+.|+| .++++|||||.+|||||+++++||+||||+.++..
T Consensus 133 EYaS~GeLYDYiSer--~~LsErEaRhfFRQIvSAVhYCH---knrVvHRDLKLENILLD~N~NiKIADFGLSNly~~-- 205 (668)
T KOG0611|consen 133 EYASGGELYDYISER--GSLSEREARHFFRQIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYAD-- 205 (668)
T ss_pred EecCCccHHHHHHHh--ccccHHHHHHHHHHHHHHHHHHh---hccceecccchhheeecCCCCeeeeccchhhhhcc--
Confidence 999999999999554 45999999999999999999999 88899999999999999999999999999986543
Q ss_pred CccccccccCCCcccChhhhccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccccc
Q 042216 632 KTHVSTQVKGSIGYLDPEYYRLQLLT-EKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPF 710 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~s-~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 710 (767)
....+..+|++-|.+||++.+.+|. +..|-||+||+||-|+.|..||++.+-. ..+.+ +..|.
T Consensus 206 -~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk------~lvrQ-Is~Ga-------- 269 (668)
T KOG0611|consen 206 -KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK------RLVRQ-ISRGA-------- 269 (668)
T ss_pred -ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH------HHHHH-hhccc--------
Confidence 3345678999999999999998875 7899999999999999999999765432 11121 11111
Q ss_pred ccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 711 LKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 711 l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
. ..+..+....-||++||..+|++|.|+.||...
T Consensus 270 Y---rEP~~PSdA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 270 Y---REPETPSDASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred c---cCCCCCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence 1 122334456789999999999999999999754
No 204
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=3.3e-35 Score=306.42 Aligned_cols=250 Identities=24% Similarity=0.380 Sum_probs=203.9
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC--CcchhHHHHHHHHHhccccceeeeEeeeeec-CCceEEEEe
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS--QQGALEFQTEIGMLSQLRYLHLVSLIGYCND-DGQMILVYD 552 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~-~~~~~lV~e 552 (767)
+|...+.||+|++|.||+++.+.+++.+|+|++.... ....+.+.+|++++++++|+|++++++.+.. +...+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4677889999999999999998888899999986432 3345568899999999999999999988764 446789999
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK 632 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~ 632 (767)
|+++++|.+++.......+++.++..++.+++.||.+|| +.+++|+||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~- 156 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC- 156 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEecccceEEecccC-
Confidence 999999999997655567999999999999999999999 7889999999999999999999999999987643221
Q ss_pred ccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccccccc
Q 042216 633 THVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLK 712 (767)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 712 (767)
.......+++.|+|||.+.+..++.++||||||++++||++|+.||...... .+.... ..+..
T Consensus 157 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~------~~~~~~-~~~~~--------- 219 (257)
T cd08223 157 -DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN------SLVYRI-IEGKL--------- 219 (257)
T ss_pred -CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH------HHHHHH-HhcCC---------
Confidence 1223455889999999999999999999999999999999999998643321 111111 11111
Q ss_pred CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 713 GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 713 ~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
...+...+..+.+++.+||+.+|++||++.++++
T Consensus 220 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 220 PPMPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred CCCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 1123345677999999999999999999999975
No 205
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2.6e-35 Score=306.94 Aligned_cols=250 Identities=26% Similarity=0.381 Sum_probs=204.7
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
++|+..+.||+|+||.||+|....+++.+++|.+..... ..++.+|++++++++|+|++++++++......++++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 467888899999999999999988778999999865432 668999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
++++|.+++.... ..+++..+..++.|++.||.||| ..+++|+||+|+||+++.++.+||+|||++....... .
T Consensus 81 ~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~--~ 154 (256)
T cd06612 81 GAGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM--A 154 (256)
T ss_pred CCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEcccccchhcccCc--c
Confidence 9999999986433 46899999999999999999999 7789999999999999999999999999987543321 1
Q ss_pred ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCC
Q 042216 635 VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGN 714 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 714 (767)
......++..|+|||++.+..++.++||||||+++|||++|+.||......... . ..... ..+ ...
T Consensus 155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~--~-----~~~~~-----~~~--~~~ 220 (256)
T cd06612 155 KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI--F-----MIPNK-----PPP--TLS 220 (256)
T ss_pred ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh--h-----hhccC-----CCC--CCC
Confidence 223345788999999999889999999999999999999999998654322111 0 00000 000 111
Q ss_pred CChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 715 APPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 715 ~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.+.....++.+++.+||+.+|++|||+.||++
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 221 DPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred chhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 23344567899999999999999999999975
No 206
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=3.6e-35 Score=306.15 Aligned_cols=252 Identities=24% Similarity=0.340 Sum_probs=207.6
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
+|+..+.||+|+||.||.++...+++.+++|.+... .....+++.+|++++++++|+||+++++++.+.+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 477888999999999999999888899999987643 344556789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+++|+|.+++.+.....+++.++..++.|++.||.||| +.+++|+||+|+||++++++.+||+|||+++.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~- 156 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS- 156 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc-
Confidence 99999999997654556899999999999999999999 67899999999999999999999999999876433221
Q ss_pred cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccC
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKG 713 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 713 (767)
......++..|+|||.+.+...+.++||||||+++|||++|+.||...... +..... ..+...
T Consensus 157 -~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~------~~~~~~-~~~~~~--------- 219 (256)
T cd08221 157 -MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL------NLVVKI-VQGNYT--------- 219 (256)
T ss_pred -cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH------HHHHHH-HcCCCC---------
Confidence 223445889999999998888999999999999999999999998543221 111111 111111
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 042216 714 NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGL 748 (767)
Q Consensus 714 ~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L 748 (767)
..+...+.++.+++.+||+.+|.+||++.++++.+
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 220 PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 11234567789999999999999999999998753
No 207
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=3.3e-35 Score=311.50 Aligned_cols=262 Identities=21% Similarity=0.264 Sum_probs=199.5
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC--CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS--QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
+|...+.||+|++|.||+|+...+++.||+|++.... ......+.+|+.++++++|||++++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4677889999999999999998888999999986442 22345688999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCC-CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC
Q 042216 554 MARGTLRDHLYNND-NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK 632 (767)
Q Consensus 554 ~~~gsL~~~L~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~ 632 (767)
++ ++|.+++.... ...+++.++..++.|++.||.||| +.+++|+||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 154 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP-- 154 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECcccceeecCCC--
Confidence 97 68988886533 356899999999999999999999 788999999999999999999999999998753221
Q ss_pred ccccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHH-------hhc----
Q 042216 633 THVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATEC-------YRN---- 700 (767)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~-------~~~---- 700 (767)
........++..|+|||.+.+ ..++.++|||||||+++||++|++||....+... +....... +..
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 232 (285)
T cd07861 155 VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQ--LFRIFRILGTPTEDVWPGVTSL 232 (285)
T ss_pred cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHHHHhCCCChhhhhcchhh
Confidence 112223356889999998865 4578999999999999999999999965432211 11000000 000
Q ss_pred ----CCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 701 ----GKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 701 ----~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
..........+. ......+.++.+++.+||+.||.+|||+.+|++
T Consensus 233 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 233 PDYKNTFPKWKKGSLR-SAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HHHHhhccccCcchhH-HhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000000000000 011234567889999999999999999999974
No 208
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.4e-35 Score=307.75 Aligned_cols=238 Identities=29% Similarity=0.446 Sum_probs=191.4
Q ss_pred eeeccCcEEEEEEEecCCC----------ceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 482 IIGRGGFGNVYKGFLNGDS----------TPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~----------~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
.||+|+||.||+|.+.+.+ ..+++|.+...... ...|.+|+.++++++|||+++++++|.. ...++|+
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 6899999999999997654 35788877654333 6788999999999999999999999988 7889999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCC-------cEEEeecCCc
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEW-------VAKVSDFGLC 624 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~-------~~ki~DfGla 624 (767)
||+++|+|.+++..... .+++..++.++.|++.||.||| +++|+||||||+|||++.++ .+||+|||++
T Consensus 80 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a 155 (259)
T cd05037 80 EYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP 155 (259)
T ss_pred EcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHh---hCCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence 99999999999976443 6899999999999999999999 78899999999999999887 7999999998
Q ss_pred ccCCCCCCccccccccCCCcccChhhhccC--CCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcC
Q 042216 625 KFGPNFSKTHVSTQVKGSIGYLDPEYYRLQ--LLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNG 701 (767)
Q Consensus 625 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~ 701 (767)
+.... .....++..|+|||++... .++.++|||||||++|||++ |..|+......+.. .+ +...
T Consensus 156 ~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~---~~----~~~~ 222 (259)
T cd05037 156 ITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKE---RF----YQDQ 222 (259)
T ss_pred ccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHH---HH----HhcC
Confidence 75322 1223466789999999876 78999999999999999999 57777544321111 11 0100
Q ss_pred CccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 042216 702 KIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLE 749 (767)
Q Consensus 702 ~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~ 749 (767)
. ..+......+.+++.+||..+|.+||++.+|++.|+
T Consensus 223 ~-----------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 223 H-----------RLPMPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred C-----------CCCCCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0 011111267899999999999999999999998873
No 209
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=4.2e-36 Score=325.10 Aligned_cols=239 Identities=28% Similarity=0.371 Sum_probs=192.1
Q ss_pred eeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHH-HHhccccceeeeEeeeeecCCceEEEEecCCCC
Q 042216 482 IIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIG-MLSQLRYLHLVSLIGYCNDDGQMILVYDYMARG 557 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~-~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~g 557 (767)
+||+|+||.||+++...+++.+|+|++... ......++..|.. +++.++||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGG 81 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCC
Confidence 699999999999999888899999998643 2233345566654 567789999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccc
Q 042216 558 TLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVST 637 (767)
Q Consensus 558 sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~ 637 (767)
+|..++... ..+++.++..++.|++.||.||| +.+|+||||||+|||+++++.+||+|||+++.... ......
T Consensus 82 ~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~--~~~~~~ 154 (325)
T cd05604 82 ELFFHLQRE--RSFPEPRARFYAAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIA--QSDTTT 154 (325)
T ss_pred CHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCC--CCCCcc
Confidence 999988543 46899999999999999999999 78899999999999999999999999999875322 112233
Q ss_pred cccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCCh
Q 042216 638 QVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPP 717 (767)
Q Consensus 638 ~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 717 (767)
...||..|+|||++.+..++.++|||||||++|||++|+.||......+ ...... .+. + ..++
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~------~~~~~~-~~~--------~--~~~~ 217 (325)
T cd05604 155 TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE------MYDNIL-HKP--------L--VLRP 217 (325)
T ss_pred cccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH------HHHHHH-cCC--------c--cCCC
Confidence 4568999999999999999999999999999999999999996543211 111111 111 0 1122
Q ss_pred hhHHHHHHHHHHccccCCCCCCCHHHH
Q 042216 718 VCLNQFVEVAMSCVNDDRIRRPSMSDV 744 (767)
Q Consensus 718 ~~~~~l~~li~~Cl~~dp~~RPs~~ev 744 (767)
..+..+.+++.+|++.+|.+||++.+.
T Consensus 218 ~~~~~~~~ll~~ll~~~p~~R~~~~~~ 244 (325)
T cd05604 218 GASLTAWSILEELLEKDRQRRLGAKED 244 (325)
T ss_pred CCCHHHHHHHHHHhccCHHhcCCCCCC
Confidence 345678899999999999999988643
No 210
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.7e-35 Score=313.40 Aligned_cols=250 Identities=23% Similarity=0.379 Sum_probs=205.5
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
.+|+..+.||.|++|.||+|....+++.|++|.+..........+.+|+.+++.++|||++++++++...+..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 36888889999999999999988788999999987655555667899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
++++|.+++.. ..+++.++..++.+++.||.||| +.+++|+||||+||+++.++.+||+|||++....... .
T Consensus 99 ~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~--~ 170 (296)
T cd06655 99 AGGSLTDVVTE---TCMDEAQIAAVCRECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ--S 170 (296)
T ss_pred CCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccchhccccc--c
Confidence 99999998854 25899999999999999999999 7889999999999999999999999999987543211 1
Q ss_pred ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCC
Q 042216 635 VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGN 714 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 714 (767)
......++..|+|||.+.+..++.++|||||||++|||++|+.||.......... ..... .... ..
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~------~~~~~-~~~~-------~~ 236 (296)
T cd06655 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY------LIATN-GTPE-------LQ 236 (296)
T ss_pred cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH------HHHhc-CCcc-------cC
Confidence 1233458889999999998889999999999999999999999996543321110 00000 0000 11
Q ss_pred CChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 715 APPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 715 ~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.+...+..+.+++.+||+.||.+||++.+++.
T Consensus 237 ~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 237 NPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred CcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 23345567889999999999999999999984
No 211
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.1e-35 Score=327.32 Aligned_cols=261 Identities=23% Similarity=0.298 Sum_probs=204.2
Q ss_pred HHHHHHHhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccccceeeeEeeeeec
Q 042216 467 ISEIKEATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLRYLHLVSLIGYCND 543 (767)
Q Consensus 467 ~~ei~~~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~ 543 (767)
+.++....++|...+.||+|+||.||++..+.+++.+|+|++... .......+.+|+.+++.++||||+++++.+.+
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 344455568999999999999999999999988899999998542 22234457889999999999999999999999
Q ss_pred CCceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCC
Q 042216 544 DGQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGL 623 (767)
Q Consensus 544 ~~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGl 623 (767)
++..++||||+++|+|.+++... .+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||+
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NIll~~~~~ikL~DfG~ 188 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGT 188 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHEEECCCCCEEEEeCCc
Confidence 99999999999999999998543 4788889999999999999999 78899999999999999999999999999
Q ss_pred cccCCCCCCccccccccCCCcccChhhhccC----CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhh
Q 042216 624 CKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQ----LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYR 699 (767)
Q Consensus 624 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~ 699 (767)
++...... ........||+.|+|||++... .++.++|||||||++|||++|+.||....... .......
T Consensus 189 a~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~------~~~~i~~ 261 (371)
T cd05622 189 CMKMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG------TYSKIMN 261 (371)
T ss_pred eeEcCcCC-cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH------HHHHHHc
Confidence 87543211 1122345699999999998754 37899999999999999999999996543211 1111111
Q ss_pred cCCccccccccccCCCChhhHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 042216 700 NGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIR--RPSMSDVVWG 747 (767)
Q Consensus 700 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~--RPs~~evl~~ 747 (767)
.... +........+..+.+++.+|+..++.+ ||++.|+++.
T Consensus 262 ~~~~-------~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 262 HKNS-------LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred CCCc-------ccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 1110 111112345667889999999844443 7899998865
No 212
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=3.8e-35 Score=309.49 Aligned_cols=256 Identities=26% Similarity=0.440 Sum_probs=204.6
Q ss_pred hccccceeeeccCcEEEEEEEecC-----CCceEEEEEeCCCCCc-chhHHHHHHHHHhccccceeeeEeeeeecCCceE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNG-----DSTPVAIKRLNPGSQQ-GALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMI 548 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~~vAVK~l~~~~~~-~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~ 548 (767)
++|+....||+|+||.||+|+.+. ..+.+++|.+...... ...++.+|++++++++|+||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 568888899999999999999753 3467999988654433 3567999999999999999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCC-------CCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeec
Q 042216 549 LVYDYMARGTLRDHLYNNDN-------PPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDF 621 (767)
Q Consensus 549 lV~ey~~~gsL~~~L~~~~~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~Df 621 (767)
+||||+++|+|.+++..... ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS---NARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh---hcCcccCcCccceEEEeCCCcEEEccc
Confidence 99999999999999965431 25899999999999999999999 778999999999999999999999999
Q ss_pred CCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhc
Q 042216 622 GLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRN 700 (767)
Q Consensus 622 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~ 700 (767)
|+++...... ........++..|+|||.+.+...+.++||||||++++||++ |..||....... ... ....
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~---~~~----~~~~ 233 (275)
T cd05046 162 SLSKDVYNSE-YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE---VLN----RLQA 233 (275)
T ss_pred ccccccCccc-ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH---HHH----HHHc
Confidence 9986432211 111223345778999999988889999999999999999998 788885433211 111 1111
Q ss_pred CCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 042216 701 GKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLE 749 (767)
Q Consensus 701 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~ 749 (767)
+.. ....+..++..+.+++.+||+.+|.+||++.|++..|+
T Consensus 234 ~~~--------~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 234 GKL--------ELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CCc--------CCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 111 11123345678999999999999999999999999885
No 213
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=3.4e-35 Score=311.18 Aligned_cols=251 Identities=22% Similarity=0.338 Sum_probs=201.8
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCC
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMAR 556 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~ 556 (767)
|+..+.||+|+||.||+|.....+..+++|.+..........+.+|+++++.++|||++++++++..++..++|+||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 45566899999999999999888889999999766555667789999999999999999999999999999999999999
Q ss_pred CChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcccc
Q 042216 557 GTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVS 636 (767)
Q Consensus 557 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~ 636 (767)
|+|..++.+.. .++++..+..++.|++.||.||| +.+++||||||+|||++.++.+||+|||++...... ....
T Consensus 87 ~~l~~~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~--~~~~ 160 (282)
T cd06643 87 GAVDAVMLELE-RPLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT--IQRR 160 (282)
T ss_pred CcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEcccccccccccc--cccc
Confidence 99999886533 46899999999999999999999 788999999999999999999999999998753221 1122
Q ss_pred ccccCCCcccChhhhc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccc
Q 042216 637 TQVKGSIGYLDPEYYR-----LQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFL 711 (767)
Q Consensus 637 ~~~~gt~~y~aPE~~~-----~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 711 (767)
....++..|+|||++. ...++.++|||||||++|||++|++||......+ ..... .. .....
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~--~~~~~----~~-~~~~~------ 227 (282)
T cd06643 161 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR--VLLKI----AK-SEPPT------ 227 (282)
T ss_pred ccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH--HHHHH----hh-cCCCC------
Confidence 3346889999999984 3457889999999999999999999985443211 11111 01 00000
Q ss_pred cCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 712 KGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 712 ~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
...+...+.++.+++.+||+.+|.+||++.++++.
T Consensus 228 -~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 228 -LAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred -CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01223355678999999999999999999998743
No 214
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=6.9e-36 Score=323.42 Aligned_cols=240 Identities=27% Similarity=0.352 Sum_probs=191.6
Q ss_pred eeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHH-HHHhccccceeeeEeeeeecCCceEEEEecCCCC
Q 042216 482 IIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEI-GMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARG 557 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei-~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~g 557 (767)
.||+|+||+||+++...+++.+|+|++.... .....++..|. .+++.++||||+++++++...+..++||||+++|
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG 81 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence 6999999999999998888899999986431 22233445554 4567889999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccc
Q 042216 558 TLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVST 637 (767)
Q Consensus 558 sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~ 637 (767)
+|.+++... ..+.+.....++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++.... ......
T Consensus 82 ~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~--~~~~~~ 154 (325)
T cd05602 82 ELFYHLQRE--RCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE--HNGTTS 154 (325)
T ss_pred cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCCCCccccc--CCCCcc
Confidence 999999653 35788888999999999999999 78899999999999999999999999999874322 112233
Q ss_pred cccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCCh
Q 042216 638 QVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPP 717 (767)
Q Consensus 638 ~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 717 (767)
...||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .. ..... .. ...++
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~---~~i~~-~~----------~~~~~ 217 (325)
T cd05602 155 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE---MY---DNILN-KP----------LQLKP 217 (325)
T ss_pred cccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH---HH---HHHHh-CC----------cCCCC
Confidence 4569999999999999999999999999999999999999996543221 11 11111 10 11223
Q ss_pred hhHHHHHHHHHHccccCCCCCCCHHHHH
Q 042216 718 VCLNQFVEVAMSCVNDDRIRRPSMSDVV 745 (767)
Q Consensus 718 ~~~~~l~~li~~Cl~~dp~~RPs~~evl 745 (767)
..+..+.+++.+|++.||.+||++.+.+
T Consensus 218 ~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 218 NITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred CCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 4566788999999999999999877543
No 215
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=3.3e-35 Score=309.91 Aligned_cols=247 Identities=27% Similarity=0.362 Sum_probs=203.6
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
+|+..+.||.|++|.||+|....+++.+|+|.+.... ......+.+|+++++.++|+|++++++++.++...++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 5677778999999999999998888999999986543 344567899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
++++|.+++... ++++..+..++.|++.||.||| +.+++|+||+|+||++++++.++|+|||+++...... .
T Consensus 82 ~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--~ 153 (274)
T cd06609 82 GGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM--S 153 (274)
T ss_pred CCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEcccccceeecccc--c
Confidence 999999998653 6899999999999999999999 7889999999999999999999999999987654321 1
Q ss_pred ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCC
Q 042216 635 VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGN 714 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 714 (767)
......++..|+|||++.+..++.++|||||||++|||++|+.||........ .. ....... +.+
T Consensus 154 ~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~------~~-~~~~~~~-----~~~--- 218 (274)
T cd06609 154 KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV------LF-LIPKNNP-----PSL--- 218 (274)
T ss_pred ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH------HH-HhhhcCC-----CCC---
Confidence 22334578899999999988899999999999999999999999964432110 00 1111111 111
Q ss_pred CChh-hHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 715 APPV-CLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 715 ~~~~-~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
+.. .+..+.+++.+||..+|++||+++++++
T Consensus 219 -~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 219 -EGNKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred -cccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 111 4567899999999999999999999975
No 216
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.9e-35 Score=312.65 Aligned_cols=251 Identities=25% Similarity=0.387 Sum_probs=205.7
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
..+|...+.||+|+||.||++.....++.||+|.+..........+.+|+.+++.++|+|++++++++...+..++||||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 36788889999999999999998877889999999766555566788999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+++++|.+++.+ ..+++.++..++.|++.||.||| +.+++||||||+|||++.++.++|+|||++.......
T Consensus 98 ~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~-- 169 (297)
T cd06656 98 LAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-- 169 (297)
T ss_pred cCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc--
Confidence 999999999854 34889999999999999999999 7789999999999999999999999999987543211
Q ss_pred cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccC
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKG 713 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 713 (767)
.......+++.|+|||.+.+..++.++|+|||||++|+|++|+.||........... ....+ ....
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~------~~~~~--------~~~~ 235 (297)
T cd06656 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL------IATNG--------TPEL 235 (297)
T ss_pred cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee------eccCC--------CCCC
Confidence 112334588899999999998999999999999999999999999965432211100 00000 0001
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 714 NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 714 ~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
..+...+..+.+++.+||+.+|.+||++.+|++
T Consensus 236 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 236 QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 123344566889999999999999999999986
No 217
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=7.3e-36 Score=322.66 Aligned_cols=237 Identities=27% Similarity=0.355 Sum_probs=190.5
Q ss_pred eeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHH-HHhccccceeeeEeeeeecCCceEEEEecCCCC
Q 042216 482 IIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIG-MLSQLRYLHLVSLIGYCNDDGQMILVYDYMARG 557 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~-~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~g 557 (767)
+||+|+||.||+++...+++.||+|++.... .....++..|.. +++.++||||+++++++.+.+..++||||+++|
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGG 81 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 6999999999999998888999999986432 222344555654 678899999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccc
Q 042216 558 TLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVST 637 (767)
Q Consensus 558 sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~ 637 (767)
+|.+++.+. ..+++.++..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++..... .....
T Consensus 82 ~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~--~~~~~ 154 (321)
T cd05603 82 ELFFHLQRE--RCFLEPRARFYAAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP--EETTS 154 (321)
T ss_pred CHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCC--CCccc
Confidence 999888543 45888999999999999999999 788999999999999999999999999998753221 12233
Q ss_pred cccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCCh
Q 042216 638 QVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPP 717 (767)
Q Consensus 638 ~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 717 (767)
...||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ....... ... ...+.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~i~-~~~----------~~~~~ 217 (321)
T cd05603 155 TFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVS------QMYDNIL-HKP----------LQLPG 217 (321)
T ss_pred cccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHH------HHHHHHh-cCC----------CCCCC
Confidence 456899999999999889999999999999999999999999654321 1111111 110 12234
Q ss_pred hhHHHHHHHHHHccccCCCCCCCHH
Q 042216 718 VCLNQFVEVAMSCVNDDRIRRPSMS 742 (767)
Q Consensus 718 ~~~~~l~~li~~Cl~~dp~~RPs~~ 742 (767)
.....+.+++.+||+.||.+||+..
T Consensus 218 ~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 218 GKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCHHHHHHHHHHccCCHhhcCCCC
Confidence 4567789999999999999999753
No 218
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-36 Score=324.64 Aligned_cols=245 Identities=25% Similarity=0.424 Sum_probs=209.0
Q ss_pred eeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCChhh
Q 042216 482 IIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGTLRD 561 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gsL~~ 561 (767)
+||+|.||+||.|+...+...+|||.+.....+..+.+.+||.+.+.|+|.|||+.+|.|.+++.+-+.||-++||||.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 79999999999999998888999999987777778889999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCC--ChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEEC-CCCcEEEeecCCcccCCCCCCcccccc
Q 042216 562 HLYNNDNPPL--PWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLD-EEWVAKVSDFGLCKFGPNFSKTHVSTQ 638 (767)
Q Consensus 562 ~L~~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld-~~~~~ki~DfGla~~~~~~~~~~~~~~ 638 (767)
+|+..-+ +| .+.++--...||++||.||| .+.|||||||-+|||++ -.|.+||+|||-++... ....++..
T Consensus 662 LLrskWG-PlKDNEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA--ginP~TET 735 (1226)
T KOG4279|consen 662 LLRSKWG-PLKDNESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA--GINPCTET 735 (1226)
T ss_pred HHHhccC-CCccchhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhc--cCCccccc
Confidence 9976654 45 67788888999999999999 78899999999999996 57899999999988643 23445667
Q ss_pred ccCCCcccChhhhccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCC
Q 042216 639 VKGSIGYLDPEYYRLQ--LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAP 716 (767)
Q Consensus 639 ~~gt~~y~aPE~~~~~--~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 716 (767)
..||.-|||||++..+ .|...+|||||||++.||.||++||...+... .+.+....+ ....+.|
T Consensus 736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq---AAMFkVGmy-----------KvHP~iP 801 (1226)
T KOG4279|consen 736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ---AAMFKVGMY-----------KVHPPIP 801 (1226)
T ss_pred cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh---Hhhhhhcce-----------ecCCCCc
Confidence 7899999999999865 58899999999999999999999997665431 111111111 1234567
Q ss_pred hhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 717 PVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 717 ~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.+.+.+...++++|+.+||.+||++++++.
T Consensus 802 eelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 802 EELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 888899999999999999999999999984
No 219
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=5.9e-35 Score=306.49 Aligned_cols=249 Identities=24% Similarity=0.370 Sum_probs=200.8
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCc---------chhHHHHHHHHHhccccceeeeEeeeeecCCce
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQ---------GALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQM 547 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~---------~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~ 547 (767)
|.....||+|++|.||+|....+++.+|+|.+...... ..+.+.+|++++++++||||+++++++.+.+..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 45567899999999999998877889999988654221 124578999999999999999999999999999
Q ss_pred EEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccC
Q 042216 548 ILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFG 627 (767)
Q Consensus 548 ~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~ 627 (767)
++++||+++++|.+++... ..+++..+..++.|++.||.||| +.+++||||+|+||++++++.+||+|||+++..
T Consensus 82 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH---~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~ 156 (267)
T cd06628 82 NIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGISKKL 156 (267)
T ss_pred EEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHH---hcCcccccCCHHHEEEcCCCCEEecccCCCccc
Confidence 9999999999999999654 45889999999999999999999 778999999999999999999999999998754
Q ss_pred CCCCC----ccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCc
Q 042216 628 PNFSK----THVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKI 703 (767)
Q Consensus 628 ~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~ 703 (767)
..... ........|+..|+|||.+.+..++.++|||||||++|||++|+.||........ . .. ...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~---~~-~~~--- 226 (267)
T cd06628 157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA---I---FK-IGE--- 226 (267)
T ss_pred ccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH---H---HH-Hhc---
Confidence 32111 0111234578899999999988899999999999999999999999965322110 0 00 001
Q ss_pred cccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 704 GDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 704 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
......+...+..+.+++.+||+.||.+||++.||++
T Consensus 227 ------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 227 ------NASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred ------cCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 1112233455678899999999999999999999975
No 220
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-35 Score=304.06 Aligned_cols=265 Identities=23% Similarity=0.335 Sum_probs=202.3
Q ss_pred HhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhc--cccceeeeEeeeeecC----Cc
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQ--LRYLHLVSLIGYCNDD----GQ 546 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~--l~Hpniv~l~g~~~~~----~~ 546 (767)
...+....+.||+|.||.||+|.+++ ..||||++... +++.+.+|.++.+. |||+||+.+++.-..+ .+
T Consensus 209 iarqI~L~e~IGkGRyGEVwrG~wrG--e~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQ 283 (513)
T KOG2052|consen 209 IARQIVLQEIIGKGRFGEVWRGRWRG--EDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQ 283 (513)
T ss_pred hhheeEEEEEecCccccceeeccccC--CceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEE
Confidence 34677788899999999999999987 57999999643 34466777777664 6999999999986544 37
Q ss_pred eEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHh-----CCCCCeEecCCCCCCeEECCCCcEEEeec
Q 042216 547 MILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHT-----GASKVIIHRDVKTTNILLDEEWVAKVSDF 621 (767)
Q Consensus 547 ~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-----~~~~~iiH~Dlk~~NILld~~~~~ki~Df 621 (767)
++||.+|.++|||.|||.+ ..++-+..++++..+|.||++||. .+.+.|.|||||+.|||+..++.+.|+|+
T Consensus 284 LwLvTdYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADL 360 (513)
T KOG2052|consen 284 LWLVTDYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 360 (513)
T ss_pred EEEeeecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeec
Confidence 8999999999999999965 358999999999999999999994 45788999999999999999999999999
Q ss_pred CCcccCCCCC--CccccccccCCCcccChhhhccCC----CC--chhhHHHHHHHHHHHHhC----------CCCCCCCC
Q 042216 622 GLCKFGPNFS--KTHVSTQVKGSIGYLDPEYYRLQL----LT--EKSDVYSFGVVLLEVLCA----------RPPILRTG 683 (767)
Q Consensus 622 Gla~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~----~s--~ksDV~SfGvvl~elltg----------~~P~~~~~ 683 (767)
|||-...... ........+||.+|||||++.... +. ..+||||||+|+||++.. +.||....
T Consensus 361 GLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~V 440 (513)
T KOG2052|consen 361 GLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVV 440 (513)
T ss_pred eeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCC
Confidence 9986433221 112234567999999999997532 21 358999999999999743 36765443
Q ss_pred CccchhHHHHHHHHhhcCCccccccccccCCC-----ChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhh
Q 042216 684 DKKQVNLAVWATECYRNGKIGDIIDPFLKGNA-----PPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQLL 755 (767)
Q Consensus 684 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~-----~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~~ 755 (767)
..+. +..+ +.. -+....++... ...++..+.++|+.||..+|.-|-|+--+-+.|.++.+..
T Consensus 441 p~DP-s~ee-Mrk--------VVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~~ 507 (513)
T KOG2052|consen 441 PSDP-SFEE-MRK--------VVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNSD 507 (513)
T ss_pred CCCC-CHHH-Hhc--------ceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcCh
Confidence 2211 1111 111 11222333322 3356788999999999999999999999999998887644
No 221
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=5.7e-35 Score=304.33 Aligned_cols=251 Identities=31% Similarity=0.496 Sum_probs=203.7
Q ss_pred ccceeeeccCcEEEEEEEecCCC----ceEEEEEeCCCCCc-chhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEe
Q 042216 478 NNLLIIGRGGFGNVYKGFLNGDS----TPVAIKRLNPGSQQ-GALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 478 ~~~~~LG~G~fG~Vy~g~~~~~~----~~vAVK~l~~~~~~-~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~e 552 (767)
+..+.||.|+||.||+++....+ ..||+|.+...... ..+.+..|++++..++|+||+++++++.+.+..+++||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 44568999999999999998655 78999999765443 56689999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK 632 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~ 632 (767)
|+++++|.+++.......+++.++..++.|++.||+||| +.+++|+||||+||++++++.++|+|||+++.......
T Consensus 82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (258)
T smart00219 82 YMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY 158 (258)
T ss_pred ccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHh---cCCeeecccccceEEEccCCeEEEcccCCceecccccc
Confidence 999999999997654433899999999999999999999 78899999999999999999999999999976543211
Q ss_pred ccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccccccc
Q 042216 633 THVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFL 711 (767)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 711 (767)
.. .....++..|+|||.+....++.++||||+|++++||++ |++||...... .+.. . ...+.
T Consensus 159 ~~-~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~---~~~~---~-~~~~~--------- 221 (258)
T smart00219 159 YK-KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNE---EVLE---Y-LKKGY--------- 221 (258)
T ss_pred cc-cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH---H-HhcCC---------
Confidence 11 112336789999999988899999999999999999998 78888543221 1111 1 11111
Q ss_pred cCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 042216 712 KGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGL 748 (767)
Q Consensus 712 ~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L 748 (767)
....+...+.++.+++.+|+..+|++|||+.|+++.|
T Consensus 222 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 222 RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 1112333567899999999999999999999998764
No 222
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=3.5e-35 Score=306.09 Aligned_cols=247 Identities=30% Similarity=0.490 Sum_probs=200.4
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
++|...+.||+|+||.||++... ++.+|+|.++... ....+.+|+.++++++|||++++++++..+ ..+++|||+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~ 80 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEYT--GQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELM 80 (254)
T ss_pred HHceeeeeeccCCCCceEecccC--CCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECC
Confidence 45778889999999999999764 4679999986432 345789999999999999999999998654 579999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
++|+|.+++.......+++..++.++.|++.||.||| +.+++||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~---- 153 (254)
T cd05083 81 SKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG---- 153 (254)
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCCccceecccc----
Confidence 9999999997665556899999999999999999999 788999999999999999999999999998753221
Q ss_pred ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccC
Q 042216 635 VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKG 713 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 713 (767)
......+..|+|||.+.+..++.++|+|||||++|||++ |+.||......+ +. .....+ .+.
T Consensus 154 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---~~----~~~~~~---------~~~ 216 (254)
T cd05083 154 -VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE---VK----ECVEKG---------YRM 216 (254)
T ss_pred -CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH---HH----HHHhCC---------CCC
Confidence 112234567999999998899999999999999999997 999986543221 11 111111 111
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 042216 714 NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEF 750 (767)
Q Consensus 714 ~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~ 750 (767)
..+..++..+.+++.+||+.+|.+||++.+|++.|++
T Consensus 217 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 217 EPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 2233456788999999999999999999999998864
No 223
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=3.4e-35 Score=314.37 Aligned_cols=262 Identities=19% Similarity=0.303 Sum_probs=200.9
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
++|...+.||+|+||.||+|....+++.||+|.+.... ......+.+|+.++++++||||+++++++...+..++|+||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 46888889999999999999998888899999986543 23344678899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
++ ++|.+++.... ..+++..+..++.|+++||.||| +.+|+|+||||+|||+++++.+||+|||+++......
T Consensus 86 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-- 158 (301)
T cd07873 86 LD-KDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-- 158 (301)
T ss_pred cc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC--
Confidence 97 59998886543 35889999999999999999999 7889999999999999999999999999987532211
Q ss_pred cccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhh---cCCcccccc-
Q 042216 634 HVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYR---NGKIGDIID- 708 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~d- 708 (767)
.......++..|+|||.+.+ ..++.++|||||||++|||++|++||......+... ....... ......+.+
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 235 (301)
T cd07873 159 KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLH---FIFRILGTPTEETWPGILSN 235 (301)
T ss_pred CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHHHcCCCChhhchhhhcc
Confidence 11223456889999998865 457889999999999999999999996554322111 1111100 000000000
Q ss_pred --------ccccCC----CChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 709 --------PFLKGN----APPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 709 --------~~l~~~----~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
+..... .....+..+.+++.+|++.||.+|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 236 EEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred ccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000000 11234567889999999999999999999985
No 224
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=2.4e-35 Score=311.58 Aligned_cols=248 Identities=26% Similarity=0.367 Sum_probs=202.3
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
.|+..+.||+|+||.||+|.+...+..||+|.+.... ....+.+.+|++++++++||||+++++++..++..++|+||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 3556668999999999999998778899999987443 334557899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
++++|.+++.. ..+++..+..++.|+++||.||| ..+++|+||+|+||++++++.++|+|||++....... .
T Consensus 85 ~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--~ 156 (277)
T cd06642 85 GGGSALDLLKP---GPLEETYIATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--I 156 (277)
T ss_pred CCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEccccccccccCcc--h
Confidence 99999998853 35899999999999999999999 7889999999999999999999999999987543211 1
Q ss_pred ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCC
Q 042216 635 VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGN 714 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 714 (767)
......++..|+|||++.+..++.++|||||||++|||++|+.|+......... . ..... ....
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~---~----~~~~~---------~~~~ 220 (277)
T cd06642 157 KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVL---F----LIPKN---------SPPT 220 (277)
T ss_pred hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHH---h----hhhcC---------CCCC
Confidence 122345788999999999989999999999999999999999998543322110 0 01111 1111
Q ss_pred CChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 715 APPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 715 ~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
.+..++..+.+++.+||+.+|.+||++.+|++.
T Consensus 221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 221 LEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred CCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 223456678999999999999999999999973
No 225
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=4.5e-35 Score=305.39 Aligned_cols=250 Identities=23% Similarity=0.353 Sum_probs=205.9
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
+|+..+.||+|+||.+|++....+++.+|+|++... ......++.+|+.++++++||||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 477888999999999999999888899999998643 233455789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+++++|.+++.......+++.+++.++.|++.||.||| +.+++|+||+|+|||++.++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 155 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV-- 155 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch--
Confidence 99999999997655556899999999999999999999 7889999999999999999999999999987543211
Q ss_pred cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccC
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKG 713 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 713 (767)
.......|+..|+|||++.+...+.++|+|||||+++||++|+.||...... ..+..... +.. .
T Consensus 156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~------~~~~~~~~-~~~---------~ 219 (256)
T cd08218 156 ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK------NLVLKIIR-GSY---------P 219 (256)
T ss_pred hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH------HHHHHHhc-CCC---------C
Confidence 1122345788999999999889999999999999999999999998543211 11111111 111 1
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 714 NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 714 ~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
..+.....++.+++.+||+.+|.+||++.+|++
T Consensus 220 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 220 PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 123345677999999999999999999999986
No 226
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.5e-35 Score=311.56 Aligned_cols=258 Identities=22% Similarity=0.316 Sum_probs=206.7
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
++|+..+.||+|+||+||++....+++.+|+|++.... ......+.+|+++++.++||||+++++++...+..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 46777789999999999999998778899999886543 33456789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+++|+|.+++.+. ..+++..+..++.+++.+|.|||+ ..+++|+||||+||++++++.++|+|||++......
T Consensus 85 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~--- 157 (284)
T cd06620 85 MDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS--- 157 (284)
T ss_pred CCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh---
Confidence 9999999988653 458999999999999999999994 357999999999999999999999999998643221
Q ss_pred cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCcc-----chhHHHHHHHHhhcCCcccccc
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKK-----QVNLAVWATECYRNGKIGDIID 708 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~d 708 (767)
......|+..|+|||++.+..++.++|||||||++|||++|+.||......+ ...+..+........ .
T Consensus 158 -~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 230 (284)
T cd06620 158 -IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP------P 230 (284)
T ss_pred -ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc------C
Confidence 1223568999999999988899999999999999999999999997544321 111122222211110 0
Q ss_pred ccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 042216 709 PFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLE 749 (767)
Q Consensus 709 ~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~ 749 (767)
+.+ ....++.++.+++.+||+.||.+|||+.|++++.-
T Consensus 231 ~~~---~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~ 268 (284)
T cd06620 231 PRL---PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPP 268 (284)
T ss_pred CCC---CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 001 01125567899999999999999999999998653
No 227
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.9e-35 Score=301.57 Aligned_cols=268 Identities=21% Similarity=0.255 Sum_probs=206.2
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCc--chhHHHHHHHHHhccccce-eeeEeeeeecCC-----
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQ--GALEFQTEIGMLSQLRYLH-LVSLIGYCNDDG----- 545 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~--~~~~f~~Ei~~l~~l~Hpn-iv~l~g~~~~~~----- 545 (767)
...|..+++||+|+||+||+|..+..++.||+|++.....+ ....-.+|+.+|++|+|+| |+.|++++...+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 44567777899999999999999988899999999765442 2344689999999999999 999999998776
Q ss_pred -ceEEEEecCCCCChhhhhccCCC--CCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecC
Q 042216 546 -QMILVYDYMARGTLRDHLYNNDN--PPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFG 622 (767)
Q Consensus 546 -~~~lV~ey~~~gsL~~~L~~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfG 622 (767)
.++||+||++. +|.+++..... ..++...+..++.|+++||+||| +++|+||||||+||||+++|.+||+|||
T Consensus 90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCcceEEECCCCcEeeeccc
Confidence 88999999987 99999966543 35777899999999999999999 8889999999999999999999999999
Q ss_pred CcccCCCCCCccccccccCCCcccChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcC
Q 042216 623 LCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQ-LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNG 701 (767)
Q Consensus 623 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~ 701 (767)
+|+...-.. ...+...+|..|.|||++.+. .|+...||||+||++.||+++++-|.+..+.++...+--......+.
T Consensus 166 lAra~~ip~--~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~ 243 (323)
T KOG0594|consen 166 LARAFSIPM--RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEK 243 (323)
T ss_pred hHHHhcCCc--ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCcc
Confidence 998643222 224556788999999998876 79999999999999999999999887766533322221111111111
Q ss_pred Ccccc-----ccccccCCC-Chh-------hHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 702 KIGDI-----IDPFLKGNA-PPV-------CLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 702 ~~~~~-----~d~~l~~~~-~~~-------~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
....+ .+....... +.. ......+++.+|++.+|.+|.|+..++.+
T Consensus 244 ~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 244 DWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 11111 010111110 111 11367899999999999999999999875
No 228
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.2e-35 Score=326.16 Aligned_cols=253 Identities=22% Similarity=0.322 Sum_probs=198.3
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
++|+..+.||+|+||.||++..+..++.||+|++... .......+.+|+.++..++|+||+++++.+.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 3688889999999999999999888899999998643 2233456888999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
||+++|+|.+++.+. ..+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 81 EFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred eCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence 999999999999654 45899999999999999999999 7889999999999999999999999999986432110
Q ss_pred C---------------------------------ccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCC
Q 042216 632 K---------------------------------THVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPP 678 (767)
Q Consensus 632 ~---------------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P 678 (767)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 0 0011234699999999999999999999999999999999999999
Q ss_pred CCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCC---HHHHHH
Q 042216 679 ILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPS---MSDVVW 746 (767)
Q Consensus 679 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs---~~evl~ 746 (767)
|......+.. .... ... ..+........+.++.+++.+|+. ||.+|++ +.|+++
T Consensus 236 f~~~~~~~~~------~~i~-~~~------~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 236 FCSETPQETY------RKVM-NWK------ETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKS 292 (360)
T ss_pred CCCCCHHHHH------HHHH-cCC------CceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhc
Confidence 9654332111 1111 000 001000111245667888888764 9999985 666664
No 229
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.4e-35 Score=308.40 Aligned_cols=253 Identities=22% Similarity=0.328 Sum_probs=202.4
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
++|...+.||+|+||.||+|+...+++.+|+|.++.........+.+|+.+++.++||||+++++.+...+..++|+||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 46777778999999999999998888999999987665555566889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
++++|.+++... ..+++.++..++.|++.||.||| ..+++|+||||+||+++.++.+||+|||++...... ..
T Consensus 89 ~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~--~~ 161 (267)
T cd06645 89 GGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT--IA 161 (267)
T ss_pred CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcceeeeEccCc--cc
Confidence 999999998543 35899999999999999999999 778999999999999999999999999998654221 11
Q ss_pred ccccccCCCcccChhhhc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccc
Q 042216 635 VSTQVKGSIGYLDPEYYR---LQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFL 711 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~---~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 711 (767)
......|+..|+|||++. ...++.++|||||||++|||++|+.||......... .. ..... ...+..
T Consensus 162 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~--~~-----~~~~~---~~~~~~ 231 (267)
T cd06645 162 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL--FL-----MTKSN---FQPPKL 231 (267)
T ss_pred ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhH--Hh-----hhccC---CCCCcc
Confidence 223446889999999874 456889999999999999999999998654322111 00 00000 000111
Q ss_pred cCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 712 KGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 712 ~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.. ....+..+.+++.+||+.+|++||++++|++
T Consensus 232 ~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 232 KD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred cc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 10 1124457889999999999999999999875
No 230
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.2e-35 Score=309.91 Aligned_cols=253 Identities=29% Similarity=0.448 Sum_probs=201.4
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchh--HHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGAL--EFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~--~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
|+..+.||+|+||+||++...++++.+|+|++......... ...+|+.++++++||||+++++++.+....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 45677999999999999999998889999999766433322 3456999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
++++|.+++. ....+++.+++.++.|+++||.+|| +.+++|+||||+||++++++.++|+|||++.... ....
T Consensus 81 ~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~--~~~~ 153 (260)
T PF00069_consen 81 PGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDFGSSVKLS--ENNE 153 (260)
T ss_dssp TTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSGTTTEEST--STTS
T ss_pred cccccccccc--ccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc--cccc
Confidence 9999999997 2345899999999999999999999 6789999999999999999999999999987531 1222
Q ss_pred ccccccCCCcccChhhhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccC
Q 042216 635 VSTQVKGSIGYLDPEYYR-LQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKG 713 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~-~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 713 (767)
......++..|+|||.+. ....+.++||||+|+++++|++|..|+............. ..... ... ...
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~---~~~~~----~~~---~~~ 223 (260)
T PF00069_consen 154 NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIE---KILKR----PLP---SSS 223 (260)
T ss_dssp EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHH---HHHHT----HHH---HHT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhh---hcccc----ccc---ccc
Confidence 344566899999999998 8899999999999999999999999996552111111111 11000 000 000
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 714 NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 714 ~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
........++.+++.+||+.||++||++.++++
T Consensus 224 ~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 224 QQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred cccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 001112378999999999999999999999975
No 231
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=8.4e-35 Score=303.35 Aligned_cols=251 Identities=29% Similarity=0.491 Sum_probs=201.3
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
.+|+..+.||+|+||.||++.+.. +..+|+|.+.... ....+|.+|++++++++|||++++++++......++|+||+
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~-~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLE-KRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM 81 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeC-CCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC
Confidence 357777899999999999998864 4689999886443 23457899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
++++|.+++.... ..+++..+..++.+++.+|.||| +.+++|+||||+||+++.++.+||+|||+++...... ..
T Consensus 82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~~ 156 (256)
T cd05112 82 EHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ-YT 156 (256)
T ss_pred CCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCcceeecccCc-cc
Confidence 9999999986543 35899999999999999999999 6789999999999999999999999999987543211 11
Q ss_pred ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccC
Q 042216 635 VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKG 713 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 713 (767)
......++.+|+|||++.++.++.++||||||+++|||++ |+.||......+ .... ...+ ...
T Consensus 157 ~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~------~~~~-~~~~---------~~~ 220 (256)
T cd05112 157 SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE------VVET-INAG---------FRL 220 (256)
T ss_pred ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH------HHHH-HhCC---------CCC
Confidence 1122235678999999998899999999999999999998 999985433221 1111 1111 011
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 042216 714 NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGL 748 (767)
Q Consensus 714 ~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L 748 (767)
..+...+..+.+++.+||+.+|++||++.+++++|
T Consensus 221 ~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 221 YKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 11223457799999999999999999999999887
No 232
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=8.4e-35 Score=307.42 Aligned_cols=248 Identities=25% Similarity=0.354 Sum_probs=204.4
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC-CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG-SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
.|+..+.||+|+||.||+|.....+..||+|.+... .......+.+|++++++++|+|++++++++.++...++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 466677899999999999999877889999998644 2344567899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
++|+|.+++.. .++++.+...++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++....... .
T Consensus 85 ~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~--~ 156 (277)
T cd06640 85 GGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--I 156 (277)
T ss_pred CCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc--c
Confidence 99999999854 35889999999999999999999 7889999999999999999999999999987543211 1
Q ss_pred ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCC
Q 042216 635 VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGN 714 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 714 (767)
......++..|+|||++.+..++.++|+|||||++|||++|+.|+......... . .... .....
T Consensus 157 ~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~------~-~~~~---------~~~~~ 220 (277)
T cd06640 157 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL------F-LIPK---------NNPPT 220 (277)
T ss_pred ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHh------h-hhhc---------CCCCC
Confidence 223345788999999999888999999999999999999999998654322111 0 0001 11122
Q ss_pred CChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 715 APPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 715 ~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
.+..++..+.+++.+||+.+|++||++.+++..
T Consensus 221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 221 LTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 334567789999999999999999999999865
No 233
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.4e-35 Score=324.56 Aligned_cols=262 Identities=24% Similarity=0.271 Sum_probs=200.0
Q ss_pred hhccccceeeeccCcEEEEEEEecC--CCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNG--DSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~--~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
..+|...+.||+|+||.||++...+ .+..||+|.+... ..+.+|+++|++++||||+++++++......+++|
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 3578999999999999999997653 3467999987542 24568999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
|++. ++|.+++.. ...+++.+++.++.|++.||.||| .++|+||||||+|||++.++.+||+|||+++......
T Consensus 166 e~~~-~~l~~~l~~--~~~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~ 239 (392)
T PHA03207 166 PKYK-CDLFTYVDR--SGPLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP 239 (392)
T ss_pred hhcC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEccCccccccCccc
Confidence 9996 589988833 346999999999999999999999 7889999999999999999999999999987544322
Q ss_pred CccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccch-hHHHHHHHHhhcCCccc-----
Q 042216 632 KTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQV-NLAVWATECYRNGKIGD----- 705 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~-~l~~~~~~~~~~~~~~~----- 705 (767)
.........||..|+|||++....++.++|||||||++|||++|+.||......... .+.. +..........-
T Consensus 240 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~-i~~~~~~~~~~~~~~~~ 318 (392)
T PHA03207 240 DTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRS-IIRCMQVHPLEFPQNGS 318 (392)
T ss_pred ccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHH-HHHHhccCccccCCccc
Confidence 222233457999999999999999999999999999999999999999665432211 1111 111111000000
Q ss_pred --c------ccccccCCCC-------hhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 706 --I------IDPFLKGNAP-------PVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 706 --~------~d~~l~~~~~-------~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
+ .....+.... .....++.+++.+||+.||++|||+.|++..
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 319 TNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred hhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 0000010000 1224567889999999999999999999865
No 234
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=5.6e-35 Score=316.61 Aligned_cols=257 Identities=21% Similarity=0.245 Sum_probs=196.0
Q ss_pred ceeeecc--CcEEEEEEEecCCCceEEEEEeCCCC--CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCC
Q 042216 480 LLIIGRG--GFGNVYKGFLNGDSTPVAIKRLNPGS--QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMA 555 (767)
Q Consensus 480 ~~~LG~G--~fG~Vy~g~~~~~~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~ 555 (767)
.++||+| +|++||++..+.+++.||+|++.... ......+.+|+++++.++||||+++++++..++..++|+||++
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 82 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 82 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence 4579999 78999999999888999999987542 2233457789999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC-c-
Q 042216 556 RGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK-T- 633 (767)
Q Consensus 556 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~-~- 633 (767)
+|+|.+++.......+++..+..++.|++.||.||| +.+|+||||||+|||++.++.++++||+.+........ .
T Consensus 83 ~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~ 159 (327)
T cd08227 83 YGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLR 159 (327)
T ss_pred CCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccchhhcccccccccc
Confidence 999999997655556899999999999999999999 78899999999999999999999999986543211110 0
Q ss_pred ---cccccccCCCcccChhhhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccc
Q 042216 634 ---HVSTQVKGSIGYLDPEYYRL--QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIID 708 (767)
Q Consensus 634 ---~~~~~~~gt~~y~aPE~~~~--~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 708 (767)
.......++..|+|||++.. ..++.++|||||||++|||++|+.||....... ..... ..+.+...++
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~~-----~~~~~~~~~~ 232 (327)
T cd08227 160 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ--MLLEK-----LNGTVPCLLD 232 (327)
T ss_pred ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhH--HHHHH-----hcCCcccccc
Confidence 01112346778999999876 468999999999999999999999996543211 00000 0011110000
Q ss_pred -------------------ccc-----------------cCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 709 -------------------PFL-----------------KGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 709 -------------------~~l-----------------~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
..+ ...........+.+++.+||+.||.+|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 233 TTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred ccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 000 00112234567899999999999999999999985
No 235
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.9e-35 Score=335.73 Aligned_cols=266 Identities=20% Similarity=0.318 Sum_probs=195.8
Q ss_pred HHHHhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhcccc------ceeeeEeeeeec
Q 042216 470 IKEATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRY------LHLVSLIGYCND 543 (767)
Q Consensus 470 i~~~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H------pniv~l~g~~~~ 543 (767)
+...+++|...++||+|+||+||+|.....++.||||+++... ....++..|++++.+++| .+++.+++++..
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 3445678999999999999999999998888899999986432 223455667777777654 458899998875
Q ss_pred C-CceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCC--------
Q 042216 544 D-GQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEW-------- 614 (767)
Q Consensus 544 ~-~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~-------- 614 (767)
+ +..++|||++ +++|.+++.+. ..+++..+..|+.|++.||.|||+ ..+|+||||||+|||++.++
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~--~~gIiHrDlKP~NILl~~~~~~~~~~~~ 277 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHT--ELHLMHTDLKPENILMETSDTVVDPVTN 277 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh--cCCeecCCCCHHHEEEecCCcccccccc
Confidence 4 5788999988 66899988654 469999999999999999999993 25899999999999998765
Q ss_pred --------cEEEeecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCcc
Q 042216 615 --------VAKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKK 686 (767)
Q Consensus 615 --------~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~ 686 (767)
.+||+|||++.... .......||..|+|||++.+..++.++|||||||++|||++|+.||......+
T Consensus 278 ~~~~~~~~~vkl~DfG~~~~~~-----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~ 352 (467)
T PTZ00284 278 RALPPDPCRVRICDLGGCCDER-----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLE 352 (467)
T ss_pred cccCCCCceEEECCCCccccCc-----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 49999999876321 22345679999999999999999999999999999999999999997654432
Q ss_pred chhHHHHH---------HH--------Hhhc-CCcccccccc----ccC---CCChhhHHHHHHHHHHccccCCCCCCCH
Q 042216 687 QVNLAVWA---------TE--------CYRN-GKIGDIIDPF----LKG---NAPPVCLNQFVEVAMSCVNDDRIRRPSM 741 (767)
Q Consensus 687 ~~~l~~~~---------~~--------~~~~-~~~~~~~d~~----l~~---~~~~~~~~~l~~li~~Cl~~dp~~RPs~ 741 (767)
...+.... .. .+.. +.+....++. +.. .........+++|+.+||+.||.+|||+
T Consensus 353 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta 432 (467)
T PTZ00284 353 HLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNA 432 (467)
T ss_pred HHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCH
Confidence 22221110 00 0000 0000000000 000 0000123567899999999999999999
Q ss_pred HHHHH
Q 042216 742 SDVVW 746 (767)
Q Consensus 742 ~evl~ 746 (767)
.|+++
T Consensus 433 ~e~L~ 437 (467)
T PTZ00284 433 RQMTT 437 (467)
T ss_pred HHHhc
Confidence 99985
No 236
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=7.8e-35 Score=304.41 Aligned_cols=254 Identities=24% Similarity=0.380 Sum_probs=206.9
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
++|...+.||+|+||.||++....+++.+++|.+........+.+.+|++++++++|||++++++++..++..+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 46888889999999999999998777899999997665556778999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
++++|.+++.... ..+++.++..++.|++.||.||| ..+++|+||||+||++++++.+||+|||++...... ..
T Consensus 83 ~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~--~~ 156 (262)
T cd06613 83 GGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT--IA 156 (262)
T ss_pred CCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECccccchhhhhh--hh
Confidence 9999999986542 46899999999999999999999 788999999999999999999999999998754321 11
Q ss_pred ccccccCCCcccChhhhccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccc
Q 042216 635 VSTQVKGSIGYLDPEYYRLQ---LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFL 711 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~---~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 711 (767)
......++..|+|||.+... .++.++|||||||++|||++|+.|+......+.. .. ..... ...+.+
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~--~~-----~~~~~---~~~~~~ 226 (262)
T cd06613 157 KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRAL--FL-----ISKSN---FPPPKL 226 (262)
T ss_pred ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH--HH-----HHhcc---CCCccc
Confidence 12334678899999999776 8899999999999999999999999654432111 11 01110 000011
Q ss_pred cCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 712 KGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 712 ~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
..+...+.++.+++.+||+.+|.+|||+.+|+.
T Consensus 227 --~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 227 --KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred --cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 112345677999999999999999999999974
No 237
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=7.4e-35 Score=319.85 Aligned_cols=264 Identities=22% Similarity=0.238 Sum_probs=199.6
Q ss_pred HhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeecCC-----
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDG----- 545 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~----- 545 (767)
..++|...+.||+|+||.||++.....++.||+|++... ......++.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 457899999999999999999999888899999998643 2334557889999999999999999999986443
Q ss_pred -ceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCc
Q 042216 546 -QMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLC 624 (767)
Q Consensus 546 -~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla 624 (767)
..++||||+++ +|.+.+.. .+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||++
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a 170 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLA 170 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc----cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEecCCCc
Confidence 57999999976 67666632 3788999999999999999999 788999999999999999999999999998
Q ss_pred ccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchh------------HHH
Q 042216 625 KFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVN------------LAV 692 (767)
Q Consensus 625 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~------------l~~ 692 (767)
+.... ........||..|+|||.+.+..++.++|||||||++|||++|+.||...+...... ...
T Consensus 171 ~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (359)
T cd07876 171 RTACT---NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMN 247 (359)
T ss_pred ccccc---CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHH
Confidence 75322 112234568999999999999999999999999999999999999997553221100 000
Q ss_pred ----HHHHHhhc-CC-----cccccccccc---CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 693 ----WATECYRN-GK-----IGDIIDPFLK---GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 693 ----~~~~~~~~-~~-----~~~~~d~~l~---~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
........ .. ..+....... ...+.....++.+++.+||+.||++|||+.|+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 248 RLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000000 00 0000000000 00111234668899999999999999999999864
No 238
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1e-34 Score=305.20 Aligned_cols=254 Identities=26% Similarity=0.404 Sum_probs=201.7
Q ss_pred ccccceeeeccCcEEEEEEEecC-CCceEEEEEeCCCC----------CcchhHHHHHHHHHhc-cccceeeeEeeeeec
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNG-DSTPVAIKRLNPGS----------QQGALEFQTEIGMLSQ-LRYLHLVSLIGYCND 543 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~-~~~~vAVK~l~~~~----------~~~~~~f~~Ei~~l~~-l~Hpniv~l~g~~~~ 543 (767)
+|+..+.||+|+||.||+|.... .++.+|+|.+.... .....++.+|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 36677789999999999999987 56889999875321 1223457788888875 799999999999999
Q ss_pred CCceEEEEecCCCCChhhhhcc--CCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeec
Q 042216 544 DGQMILVYDYMARGTLRDHLYN--NDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDF 621 (767)
Q Consensus 544 ~~~~~lV~ey~~~gsL~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~Df 621 (767)
++..+++|||+++++|.+++.. .....+++..++.++.|++.||.|||+ ..+++|+||||+|||++.++.+||+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCHHHEEECCCCcEEEecc
Confidence 9999999999999999998743 233468999999999999999999993 357999999999999999999999999
Q ss_pred CCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcC
Q 042216 622 GLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNG 701 (767)
Q Consensus 622 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~ 701 (767)
|++....... ......++..|+|||.+.+..++.++||||||+++|||++|+.||...... ..... ...+
T Consensus 159 g~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~------~~~~~-~~~~ 228 (269)
T cd08528 159 GLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML------SLATK-IVEA 228 (269)
T ss_pred cceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH------HHHHH-Hhhc
Confidence 9987643321 233456889999999999888999999999999999999999998543221 11111 1111
Q ss_pred CccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 042216 702 KIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLE 749 (767)
Q Consensus 702 ~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~ 749 (767)
.. ........+.++.+++.+||+.||.+||++.||.++|+
T Consensus 229 ~~--------~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 229 VY--------EPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred cC--------CcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 11 00011134567899999999999999999999999885
No 239
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1e-34 Score=309.30 Aligned_cols=252 Identities=24% Similarity=0.339 Sum_probs=203.2
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
+.|+..+.||+|+||.||+|+....++.+++|.+........+.+.+|+++++.++|+|++++++.+..++..++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 45777889999999999999998888999999998766666778999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
++++|..++.+.. ..+++..+..++.|++.+|.||| ..+++||||||+||+++.++.+||+|||++...... ..
T Consensus 92 ~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--~~ 165 (292)
T cd06644 92 PGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT--LQ 165 (292)
T ss_pred CCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccCccceecccc--cc
Confidence 9999998875543 45899999999999999999999 788999999999999999999999999998643221 11
Q ss_pred ccccccCCCcccChhhhc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccc
Q 042216 635 VSTQVKGSIGYLDPEYYR-----LQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDP 709 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~-----~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 709 (767)
......++..|+|||++. ...++.++|||||||++|||++|+.|+...... ... ... ..... +
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~~~----~~~-~~~~~-----~ 233 (292)
T cd06644 166 RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--RVL----LKI-AKSEP-----P 233 (292)
T ss_pred ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH--HHH----HHH-hcCCC-----c
Confidence 123345788999999884 345788999999999999999999998543321 111 111 11110 0
Q ss_pred cccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 710 FLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 710 ~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
. ...+...+.++.+++.+||+.+|++||++.++++
T Consensus 234 ~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 234 T--LSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred c--CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0 0113345567899999999999999999999975
No 240
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=6.7e-35 Score=306.20 Aligned_cols=251 Identities=23% Similarity=0.357 Sum_probs=197.0
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC-----CcchhHHHHHHHHHhccccceeeeEeeeeec--CCce
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS-----QQGALEFQTEIGMLSQLRYLHLVSLIGYCND--DGQM 547 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~-----~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~--~~~~ 547 (767)
.+|...+.||+|+||.||+|.....+..+++|++.... .+....+.+|+.++++++||||+++++++.+ ....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 46888889999999999999998878899999886432 1233468899999999999999999998865 3577
Q ss_pred EEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccC
Q 042216 548 ILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFG 627 (767)
Q Consensus 548 ~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~ 627 (767)
++++||+++++|.+++... ..+++...+.++.|++.||.||| +.+++|+||||+||+++.++.+||+|||+++..
T Consensus 82 ~l~~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~ 156 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAY--GALTESVTRKYTRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRL 156 (266)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence 8999999999999999653 35899999999999999999999 788999999999999999999999999998754
Q ss_pred CCCCC-ccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccc
Q 042216 628 PNFSK-THVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDI 706 (767)
Q Consensus 628 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 706 (767)
..... ........++..|+|||++.+..++.++|||||||++|||++|+.||......+. ........
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~------~~~~~~~~----- 225 (266)
T cd06651 157 QTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAA------IFKIATQP----- 225 (266)
T ss_pred ccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHH------HHHHhcCC-----
Confidence 32111 1111234578899999999988899999999999999999999999964422111 11111110
Q ss_pred ccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 707 IDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 707 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.....+......+.+++ +||..+|++||++.||++
T Consensus 226 ----~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 226 ----TNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred ----CCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 01122333445566666 788899999999999974
No 241
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.1e-34 Score=305.46 Aligned_cols=254 Identities=22% Similarity=0.351 Sum_probs=199.8
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC---c-------chhHHHHHHHHHhccccceeeeEeeeeecCCc
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ---Q-------GALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQ 546 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~---~-------~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~ 546 (767)
|...+.||+|+||.||+|....+++.+|+|.+..... . ..+.+.+|+++++.++|+|++++++++...+.
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 82 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY 82 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence 5566789999999999999887788999998753211 1 12357889999999999999999999999999
Q ss_pred eEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCccc
Q 042216 547 MILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKF 626 (767)
Q Consensus 547 ~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~ 626 (767)
.++|+||+++|+|.+++.+. ..+++..+..++.|++.||.||| +++++|+||+|+||++++++.++|+|||+++.
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~ 157 (272)
T cd06629 83 LSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISDFGISKK 157 (272)
T ss_pred eEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHh---hCCeeecCCChhhEEEcCCCeEEEeecccccc
Confidence 99999999999999999654 46899999999999999999999 77899999999999999999999999999875
Q ss_pred CCCCCCccccccccCCCcccChhhhccCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcc
Q 042216 627 GPNFSKTHVSTQVKGSIGYLDPEYYRLQL--LTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIG 704 (767)
Q Consensus 627 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~ 704 (767)
..............++..|+|||.+.... ++.++|+||||+++|||++|..||......+ . ....... ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-----~-~~~~~~~-~~~ 230 (272)
T cd06629 158 SDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIA-----A-MFKLGNK-RSA 230 (272)
T ss_pred ccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHH-----H-HHHhhcc-ccC
Confidence 43322222233456889999999987654 8899999999999999999999985332211 1 1111111 111
Q ss_pred ccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 705 DIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 705 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
..+. .......+..+.+++.+||+.+|.+||++.+|++
T Consensus 231 ~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 231 PPIP----PDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred CcCC----ccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 1111 1112234678899999999999999999999975
No 242
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=9.5e-35 Score=302.66 Aligned_cols=249 Identities=27% Similarity=0.404 Sum_probs=204.3
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
+|+..+.||+|+||.||++.....++.+|+|.+... .......+.+|++++++++|||++++++.+..++..++|+||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 477788999999999999999888899999998654 233456789999999999999999999999989999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCC-CcEEEeecCCcccCCCCCC
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEE-WVAKVSDFGLCKFGPNFSK 632 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~-~~~ki~DfGla~~~~~~~~ 632 (767)
+++++|.+++.......+++..+..++.+++.+|.||| +++++|+||||+||+++++ ..+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS- 156 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-
Confidence 99999999997765566899999999999999999999 7889999999999999854 468999999987543321
Q ss_pred ccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccccccc
Q 042216 633 THVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLK 712 (767)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 712 (767)
......++..|+|||.+....++.++||||||+++|+|++|+.||...... .. +..... +. .
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~---~~---~~~~~~-~~---------~ 218 (256)
T cd08220 157 --KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP---AL---VLKIMS-GT---------F 218 (256)
T ss_pred --cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH---HH---HHHHHh-cC---------C
Confidence 122345788999999999888999999999999999999999998544321 11 111111 11 1
Q ss_pred CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 713 GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 713 ~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
...+...+.++.+++.+||+.+|.+|||+.|++.
T Consensus 219 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 219 APISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred CCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 1123345677899999999999999999999975
No 243
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=5.2e-35 Score=309.36 Aligned_cols=253 Identities=24% Similarity=0.354 Sum_probs=204.7
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
++|+..+.||+|+||.||+|....++..+|+|.+..........|.+|++++++++|+|++++++.+..+...++||||+
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFC 84 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeecc
Confidence 46788888999999999999998777899999997665556677999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
++++|.+++.+.. ..+++..+..++.|++.||.||| +.+|+|+||||+||+++.++.++|+|||++...... ..
T Consensus 85 ~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~--~~ 158 (280)
T cd06611 85 DGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST--LQ 158 (280)
T ss_pred CCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEccCccchhhccc--cc
Confidence 9999999986543 36899999999999999999999 778999999999999999999999999997653221 11
Q ss_pred ccccccCCCcccChhhhc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccc
Q 042216 635 VSTQVKGSIGYLDPEYYR-----LQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDP 709 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~-----~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 709 (767)
......++..|+|||.+. ...++.++||||||+++|||++|+.||......+ .+.. ...+.. +
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~--~~~~-----~~~~~~-----~ 226 (280)
T cd06611 159 KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR--VLLK-----ILKSEP-----P 226 (280)
T ss_pred ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH--HHHH-----HhcCCC-----C
Confidence 223345889999999975 3457789999999999999999999996543211 1111 111110 0
Q ss_pred cccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 710 FLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 710 ~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
.+ ..+..++.++.+++..||+.+|.+||++.+|++.
T Consensus 227 ~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 227 TL--DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred Cc--CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 01 1233456678999999999999999999999854
No 244
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=5.1e-35 Score=310.29 Aligned_cols=263 Identities=23% Similarity=0.340 Sum_probs=205.8
Q ss_pred cCHHHHHHHhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhcc-ccceeeeEeeeee-
Q 042216 465 FSISEIKEATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQL-RYLHLVSLIGYCN- 542 (767)
Q Consensus 465 ~~~~ei~~~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~- 542 (767)
+.++.+..+.++|+..+.||+|+||.||++.....++.+|+|.+.... ....++.+|+.++.++ +|||++++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 344566678889999999999999999999998888899999886432 2345688899999999 6999999999884
Q ss_pred ----cCCceEEEEecCCCCChhhhhcc--CCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcE
Q 042216 543 ----DDGQMILVYDYMARGTLRDHLYN--NDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVA 616 (767)
Q Consensus 543 ----~~~~~~lV~ey~~~gsL~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ 616 (767)
.++..++||||+++|+|.+++.. .....+++..+..++.|++.||.||| +.+++||||||+||++++++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~ 163 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH---VNKTIHRDVKGNNILLTTEGGV 163 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHH---hCCccccCCCHHhEEECCCCCE
Confidence 34578999999999999998753 23346899999999999999999999 7889999999999999999999
Q ss_pred EEeecCCcccCCCCCCccccccccCCCcccChhhhcc-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHH
Q 042216 617 KVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRL-----QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLA 691 (767)
Q Consensus 617 ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~ 691 (767)
||+|||+++..... ........|+..|+|||++.. ..++.++|||||||++|||++|+.|+........ +.
T Consensus 164 kl~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~--~~ 239 (286)
T cd06638 164 KLVDFGVSAQLTST--RLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA--LF 239 (286)
T ss_pred EEccCCceeecccC--CCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH--Hh
Confidence 99999998754321 112233468899999998753 4578899999999999999999999865432111 10
Q ss_pred HHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 692 VWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 692 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
. ......... ..+..+..++.+++.+||+.||++|||+.||++.
T Consensus 240 ~-----~~~~~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 240 K-----IPRNPPPTL-------HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred h-----ccccCCCcc-------cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 0 001100001 1122345678999999999999999999999864
No 245
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=8.3e-35 Score=315.76 Aligned_cols=256 Identities=23% Similarity=0.260 Sum_probs=197.6
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
++|+..+.||+|+||.||+++....++.||+|++... .....+.+.+|+.++..++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 3688889999999999999999888899999998642 2233456889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
||+++|+|.+++.+. ...+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||++.......
T Consensus 81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred ecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence 999999999999653 235899999999999999999999 7889999999999999999999999999986543211
Q ss_pred CccccccccCCCcccChhhhcc-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccc
Q 042216 632 KTHVSTQVKGSIGYLDPEYYRL-----QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDI 706 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 706 (767)
........||+.|+|||++.. +.++.++|||||||++|||++|+.||...... +.............+
T Consensus 157 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~------~~~~~i~~~~~~~~~ 229 (331)
T cd05597 157 -TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV------ETYGKIMNHKEHFQF 229 (331)
T ss_pred -CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHH------HHHHHHHcCCCcccC
Confidence 112223468999999999863 45788999999999999999999999543221 111111111110010
Q ss_pred ccccccCCCChhhHHHHHHHHHHcccc--CCCCCCCHHHHHHH
Q 042216 707 IDPFLKGNAPPVCLNQFVEVAMSCVND--DRIRRPSMSDVVWG 747 (767)
Q Consensus 707 ~d~~l~~~~~~~~~~~l~~li~~Cl~~--dp~~RPs~~evl~~ 747 (767)
.......+..+.+++.+|+.. ++..||++.++++.
T Consensus 230 ------~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 230 ------PPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred ------CCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 011122456778888887654 33448899998855
No 246
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=9e-35 Score=318.70 Aligned_cols=265 Identities=22% Similarity=0.229 Sum_probs=200.1
Q ss_pred HHhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC--CcchhHHHHHHHHHhccccceeeeEeeeeecC-----
Q 042216 472 EATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS--QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDD----- 544 (767)
Q Consensus 472 ~~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~----- 544 (767)
...++|...+.||+|+||.||++.....++.||||++.... ......+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 34578999999999999999999988778899999987542 23345678999999999999999999988543
Q ss_pred -CceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCC
Q 042216 545 -GQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGL 623 (767)
Q Consensus 545 -~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGl 623 (767)
...++||||+++ +|.+.+.. .+++..+..++.|+++||.||| +.+|+||||||+|||++.++.+||+|||+
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH---~~givHrDikp~Nill~~~~~~kl~Dfg~ 165 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGL 165 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHhh----cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEECCCCCEEEeeCcc
Confidence 357999999975 67776632 4889999999999999999999 78899999999999999999999999999
Q ss_pred cccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHH------------
Q 042216 624 CKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLA------------ 691 (767)
Q Consensus 624 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~------------ 691 (767)
++.... ........||..|+|||++.+..++.++|||||||++|||++|+.||......+.....
T Consensus 166 ~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (355)
T cd07874 166 ARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 242 (355)
T ss_pred cccCCC---ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 975322 12223456899999999999999999999999999999999999999654321111000
Q ss_pred ----HHHHHHhhc-CCccccccccc--------cCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 692 ----VWATECYRN-GKIGDIIDPFL--------KGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 692 ----~~~~~~~~~-~~~~~~~d~~l--------~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
......... ........+.. ....+.....++.+++.+||+.||++|||+.|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 243 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 000000000 00000000000 001112234578899999999999999999999974
No 247
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.3e-35 Score=318.66 Aligned_cols=192 Identities=25% Similarity=0.352 Sum_probs=166.1
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
..+|...+.||+|+||.||+|...+.+..||+|..... ....|+.++++++|+||+++++++...+..++|+||
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 138 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPH 138 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEc
Confidence 45799999999999999999999888889999975422 235699999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+. ++|.+++.... ..+++.++..|+.|++.||.||| ..+|+||||||+|||++.++.+||+|||+++.... .
T Consensus 139 ~~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~---~ 210 (357)
T PHA03209 139 YS-SDLYTYLTKRS-RPLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVV---A 210 (357)
T ss_pred cC-CcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEecCcccccccc---C
Confidence 95 58988886533 46899999999999999999999 77899999999999999999999999999874321 1
Q ss_pred cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCC
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPI 679 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~ 679 (767)
.......||..|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 211 PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 1223456899999999999999999999999999999999866554
No 248
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=9.5e-35 Score=309.26 Aligned_cols=262 Identities=26% Similarity=0.343 Sum_probs=206.2
Q ss_pred cCHHHHHHHhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhcc-ccceeeeEeeeeec
Q 042216 465 FSISEIKEATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQL-RYLHLVSLIGYCND 543 (767)
Q Consensus 465 ~~~~ei~~~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~ 543 (767)
+++.++..++++|...+.||+|+||.||++....+++.+|+|.+.... ....++.+|+.++.++ +|||++++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 455666677889999999999999999999998888999999986432 2345678899999998 89999999999865
Q ss_pred C-----CceEEEEecCCCCChhhhhccC--CCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcE
Q 042216 544 D-----GQMILVYDYMARGTLRDHLYNN--DNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVA 616 (767)
Q Consensus 544 ~-----~~~~lV~ey~~~gsL~~~L~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ 616 (767)
. +..++|+||+++|+|.++++.. ....+++..+..++.|++.||.||| ..+++|+||||+||++++++.+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~nili~~~~~~ 167 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH---NNRIIHRDVKGNNILLTTEGGV 167 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCE
Confidence 3 3589999999999999988542 3356899999999999999999999 7789999999999999999999
Q ss_pred EEeecCCcccCCCCCCccccccccCCCcccChhhhccC-----CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHH
Q 042216 617 KVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQ-----LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLA 691 (767)
Q Consensus 617 ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~ 691 (767)
||+|||+++....... ......++..|+|||.+... .++.++|||||||++|||++|+.||......+ .+.
T Consensus 168 kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~--~~~ 243 (291)
T cd06639 168 KLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK--TLF 243 (291)
T ss_pred EEeecccchhcccccc--cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH--HHH
Confidence 9999999875432111 12234578899999998643 36889999999999999999999996543211 111
Q ss_pred HHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 692 VWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 692 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
. ........+ ..+......+.+++.+||+.+|++||++.|+++
T Consensus 244 ~-----~~~~~~~~~-------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 244 K-----IPRNPPPTL-------LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred H-----HhcCCCCCC-------CcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 1 111111111 112234457899999999999999999999975
No 249
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.3e-34 Score=306.92 Aligned_cols=265 Identities=24% Similarity=0.291 Sum_probs=200.6
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC--CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEe
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS--QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~e 552 (767)
++|+....||+|++|.||+|..+.+++.||+|++.... ....+.+.+|++++++++|+|++++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 35778889999999999999998878999999886432 2233567899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK 632 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~ 632 (767)
|++++.|..++... ..+++.++..++.|++.||.||| +++++|+||||+||+++.++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 81 YCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred ccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence 99998888876433 35899999999999999999999 78899999999999999999999999999886533221
Q ss_pred ccccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHH-HHH-------HHhhcCC-
Q 042216 633 THVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAV-WAT-------ECYRNGK- 702 (767)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~-~~~-------~~~~~~~- 702 (767)
......++..|+|||++.+ ..++.++|||||||++|||++|+.||......+...... ... ..+....
T Consensus 156 --~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07847 156 --DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQF 233 (286)
T ss_pred --cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccc
Confidence 1223457788999999876 568899999999999999999999996554322111100 000 0000000
Q ss_pred ccccccccccCCC-----ChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 703 IGDIIDPFLKGNA-----PPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 703 ~~~~~d~~l~~~~-----~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
......+...... .+..+..+.+++.+||+.+|++||++.|++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 234 FKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred cccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 0000000000000 0123567889999999999999999999874
No 250
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=6.6e-35 Score=309.55 Aligned_cols=265 Identities=25% Similarity=0.306 Sum_probs=203.1
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
+|+..+.||+|+||.||+|...++++.||+|+++.. .......+.+|++++++++|+||+++++++..++..+++|||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 578888999999999999999888889999998653 233446789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
++++.|..++.+ ...+++.++..++.|++.||.||| ..+++|+||+|+||++++++.+||+|||++........
T Consensus 82 ~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~- 155 (288)
T cd07833 82 VERTLLELLEAS--PGGLPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA- 155 (288)
T ss_pred CCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc-
Confidence 998777665533 245899999999999999999999 77899999999999999999999999999876543222
Q ss_pred cccccccCCCcccChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhh---------cCC-
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQ-LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYR---------NGK- 702 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~---------~~~- 702 (767)
.......++..|+|||++... .++.++||||||+++|||++|++||......+............. ...
T Consensus 156 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07833 156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRF 235 (288)
T ss_pred ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccc
Confidence 122335578899999999887 889999999999999999999999865433211110000000000 000
Q ss_pred ----cccccccc-ccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 703 ----IGDIIDPF-LKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 703 ----~~~~~d~~-l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
..+..++. +....+..++.++.+++.+||+.+|++||+++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 236 AGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred cccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 00000000 001122334778999999999999999999999975
No 251
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.4e-34 Score=304.68 Aligned_cols=256 Identities=26% Similarity=0.408 Sum_probs=199.0
Q ss_pred cccceeeeccCcEEEEEEEecC---CCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeecCC------
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNG---DSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDG------ 545 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~---~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~------ 545 (767)
|...++||+|+||.||+|.+.. .++.||||++... .....+++.+|++++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 4456689999999999998753 3578999998754 2334567889999999999999999999886432
Q ss_pred ceEEEEecCCCCChhhhhccC----CCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeec
Q 042216 546 QMILVYDYMARGTLRDHLYNN----DNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDF 621 (767)
Q Consensus 546 ~~~lV~ey~~~gsL~~~L~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~Df 621 (767)
..++++||+.+|+|.+++... ....+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEECcc
Confidence 247889999999999887432 1235789999999999999999999 778999999999999999999999999
Q ss_pred CCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhc
Q 042216 622 GLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRN 700 (767)
Q Consensus 622 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~ 700 (767)
|+++...............++..|++||.+....++.++|||||||++|||++ |++||...... .+..+.. .
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~---~~~~~~~----~ 230 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS---EIYNYLI----K 230 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH---HHHHHHH----c
Confidence 99885432211111223345678999999998899999999999999999999 88888644321 1111111 1
Q ss_pred CCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 042216 701 GKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFV 751 (767)
Q Consensus 701 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~ 751 (767)
+.. ...+..++..+.+++.+||+.+|.+||++.++++.|+++
T Consensus 231 ~~~---------~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 231 GNR---------LKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCc---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 110 011234567899999999999999999999999999875
No 252
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=4.1e-35 Score=310.91 Aligned_cols=265 Identities=26% Similarity=0.343 Sum_probs=200.6
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC--cchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEe
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ--QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~--~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~e 552 (767)
++|+..+.||+|+||.||+|..+.+++.+|+|++..... ...+.+.+|+++++.++||||+++++++..++..++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 367788899999999999999987789999998865422 234568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK 632 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~ 632 (767)
|+++++|.++.... ..++|.+++.++.|++.||.||| +.+++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~- 154 (286)
T cd07846 81 FVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG- 154 (286)
T ss_pred cCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-
Confidence 99999998876443 34899999999999999999999 6789999999999999999999999999987543321
Q ss_pred ccccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchh-HHHHHH-------HHhhcCCc
Q 042216 633 THVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVN-LAVWAT-------ECYRNGKI 703 (767)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~-l~~~~~-------~~~~~~~~ 703 (767)
.......++..|+|||++.+ ..++.++||||||+++|||++|++||......+... +..+.. .......+
T Consensus 155 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07846 155 -EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPL 233 (286)
T ss_pred -cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchH
Confidence 12233457889999999875 457889999999999999999999985443211110 000000 00000000
Q ss_pred -ccccccccc-----CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 704 -GDIIDPFLK-----GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 704 -~~~~d~~l~-----~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.....+... ....+..+..+.+++.+||+.+|.+||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 234 FAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred hhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 000000000 0012234677999999999999999999999875
No 253
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2e-34 Score=301.98 Aligned_cols=257 Identities=25% Similarity=0.350 Sum_probs=206.7
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
++|+..+.||.|+||+||+|....++..+++|++.... ......+.+|+++++.++|+|++++++.+...+..++++|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 36888889999999999999988788899999986542 33566799999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCC-CCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC
Q 042216 554 MARGTLRDHLYNNDN-PPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK 632 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~ 632 (767)
+++++|.+++..... ..+++.....++.|++.||.||| +.+++|+||||+||++++++.++|+|||++........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 999999999975432 56899999999999999999999 78899999999999999999999999999875433222
Q ss_pred c--cccccccCCCcccChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccc
Q 042216 633 T--HVSTQVKGSIGYLDPEYYRLQ-LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDP 709 (767)
Q Consensus 633 ~--~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 709 (767)
. .......++..|+|||++... .++.++|+|||||++|||++|+.||......+ .+... ... . .+
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~--~~~~~----~~~-~-----~~ 225 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK--VLMLT----LQN-D-----PP 225 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh--hHHHH----hcC-C-----CC
Confidence 2 122334688999999998876 78999999999999999999999996543221 11111 111 0 11
Q ss_pred cccCCC-ChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 710 FLKGNA-PPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 710 ~l~~~~-~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.+.... ....+..+.+++.+||+.||++||++.+|++
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 226 SLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred CcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 111111 1245677899999999999999999999975
No 254
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=7.5e-35 Score=308.50 Aligned_cols=261 Identities=23% Similarity=0.355 Sum_probs=206.6
Q ss_pred cCHHHHHHHhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhcc-ccceeeeEeeeeec
Q 042216 465 FSISEIKEATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQL-RYLHLVSLIGYCND 543 (767)
Q Consensus 465 ~~~~ei~~~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~ 543 (767)
.++.++......|+..+.||+|+||.||+|.....++.+|+|.+.... ....++..|+.++.++ +|+|++++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 355666667788999999999999999999998888899999986442 3345688899999998 69999999999853
Q ss_pred ------CCceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEE
Q 042216 544 ------DGQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAK 617 (767)
Q Consensus 544 ------~~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~k 617 (767)
....+++|||+++|+|.+++.......+++..+..++.|++.||.||| +.+|+|+||||+||++++++.++
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dl~~~nili~~~~~~~ 161 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLH---AHKVIHRDIKGQNVLLTENAEVK 161 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEE
Confidence 457899999999999999997655566889999999999999999999 78899999999999999999999
Q ss_pred EeecCCcccCCCCCCccccccccCCCcccChhhhc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHH
Q 042216 618 VSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYR-----LQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAV 692 (767)
Q Consensus 618 i~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~ 692 (767)
|+|||++....... .......|+..|+|||.+. ...++.++|||||||++|||++|+.||......+...
T Consensus 162 l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~--- 236 (282)
T cd06636 162 LVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF--- 236 (282)
T ss_pred EeeCcchhhhhccc--cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh---
Confidence 99999987532211 1123345888999999876 3467889999999999999999999996543211110
Q ss_pred HHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 693 WATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 693 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
. ... ..........++..+.+++.+||+.||.+||++.|+++
T Consensus 237 ---~-~~~--------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 237 ---L-IPR--------NPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred ---h-Hhh--------CCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 0 000 00011112235668999999999999999999999874
No 255
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.7e-34 Score=303.61 Aligned_cols=253 Identities=21% Similarity=0.286 Sum_probs=191.1
Q ss_pred eeeccCcEEEEEEEecCCC--ceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCC
Q 042216 482 IIGRGGFGNVYKGFLNGDS--TPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGT 558 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~--~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gs 558 (767)
.||+|+||+||+|....+. ..+++|.+.... ......|.+|+.+++.++||||+++++.|.+....++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 5899999999999764332 356677776443 3345679999999999999999999999999999999999999999
Q ss_pred hhhhhccCC--CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcccc
Q 042216 559 LRDHLYNND--NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVS 636 (767)
Q Consensus 559 L~~~L~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~ 636 (767)
|.+++++.. ...+++..+..++.|++.||.||| +.+++||||||+|||++.++.+||+|||++............
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 999997542 234677788899999999999999 678999999999999999999999999997642211111122
Q ss_pred ccccCCCcccChhhhcc-------CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCCcccccc
Q 042216 637 TQVKGSIGYLDPEYYRL-------QLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGKIGDIID 708 (767)
Q Consensus 637 ~~~~gt~~y~aPE~~~~-------~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 708 (767)
....++..|+|||++.. ..++.++|||||||++|||++ |..||....+.+ ...... .+....+.+
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~------~~~~~~-~~~~~~~~~ 231 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDRE------VLNHVI-KDQQVKLFK 231 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHH-hhcccccCC
Confidence 34457889999998753 245789999999999999997 567775433211 111111 122223333
Q ss_pred ccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 042216 709 PFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLE 749 (767)
Q Consensus 709 ~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~ 749 (767)
+.+. ......+.+++..|| .+|.+||++++|++.|.
T Consensus 232 ~~~~----~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 232 PQLE----LPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CccC----CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 3332 234567888999999 57999999999998874
No 256
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=5.7e-35 Score=317.22 Aligned_cols=256 Identities=23% Similarity=0.245 Sum_probs=198.5
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
++|...+.||+|+||.||++..+..++.+|+|++... .......+.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 3688889999999999999999988889999998542 2223345788999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
||+++|+|.+++.+.. ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~- 155 (332)
T cd05623 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED- 155 (332)
T ss_pred eccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEeecchheecccC-
Confidence 9999999999996532 35899999999999999999999 788999999999999999999999999998743221
Q ss_pred CccccccccCCCcccChhhhc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccc
Q 042216 632 KTHVSTQVKGSIGYLDPEYYR-----LQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDI 706 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 706 (767)
.........||+.|+|||++. ...++.++|||||||++|||++|+.||...... ..............
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~------~~~~~i~~~~~~~~- 228 (332)
T cd05623 156 GTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLV------ETYGKIMNHKERFQ- 228 (332)
T ss_pred CcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHH------HHHHHHhCCCcccc-
Confidence 111223456999999999986 346889999999999999999999999654321 11111111110000
Q ss_pred ccccccCCCChhhHHHHHHHHHHccccCCC--CCCCHHHHHHH
Q 042216 707 IDPFLKGNAPPVCLNQFVEVAMSCVNDDRI--RRPSMSDVVWG 747 (767)
Q Consensus 707 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~--~RPs~~evl~~ 747 (767)
.......++.++.+++.+|+..++. .|+++.|+++.
T Consensus 229 -----~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 229 -----FPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred -----CCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 0011123466788889887755444 47899999765
No 257
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.1e-34 Score=319.15 Aligned_cols=264 Identities=22% Similarity=0.248 Sum_probs=199.6
Q ss_pred HhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeecC------
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDD------ 544 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~------ 544 (767)
..++|...+.||+|+||.||++.....++.||||++... ......++.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 457899999999999999999999888889999998753 233445688999999999999999999987543
Q ss_pred CceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCc
Q 042216 545 GQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLC 624 (767)
Q Consensus 545 ~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla 624 (767)
...++||||+++ +|.+++.. .+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 173 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh----cCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEEEEeCCCc
Confidence 357999999975 77777742 4789999999999999999999 788999999999999999999999999999
Q ss_pred ccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHH---------HH-
Q 042216 625 KFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAV---------WA- 694 (767)
Q Consensus 625 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~---------~~- 694 (767)
+.... ........+|..|+|||++.+..++.++|||||||++|||++|+.||......+...... +.
T Consensus 174 ~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (364)
T cd07875 174 RTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 250 (364)
T ss_pred cccCC---CCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 75422 112234568999999999999999999999999999999999999996554321111000 00
Q ss_pred ------HHHhhc-CCcc-----ccccccc---cCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 695 ------TECYRN-GKIG-----DIIDPFL---KGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 695 ------~~~~~~-~~~~-----~~~d~~l---~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
...... .... +.....+ ..........++.+++.+|++.||.+|||+.|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred hhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000 0000 0000000 000111234568899999999999999999999864
No 258
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=2.7e-34 Score=300.51 Aligned_cols=253 Identities=25% Similarity=0.408 Sum_probs=208.8
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC-cchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ-QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
++|+..+.||+|++|.||+++....++.+++|++..... ....++.+|++++.+++|+|++++++++...+..++|+||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 367888899999999999999998889999999876543 4466799999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCC-CCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGAS-KVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK 632 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~-~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~ 632 (767)
+++++|.+++... ..+++..++.++.|+++||.||| + .+++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 81 MDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD 155 (264)
T ss_pred cCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCC
Confidence 9999999999654 56899999999999999999999 7 8899999999999999999999999999875432211
Q ss_pred ccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccccccc
Q 042216 633 THVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLK 712 (767)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 712 (767)
......++..|+|||.+....++.++|+||||+++|||++|+.||..........+..+.. ....
T Consensus 156 --~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~----~~~~--------- 220 (264)
T cd06623 156 --QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC----DGPP--------- 220 (264)
T ss_pred --cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh----cCCC---------
Confidence 1223457889999999999999999999999999999999999996554312122221111 1110
Q ss_pred CCCChh-hHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 713 GNAPPV-CLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 713 ~~~~~~-~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
...+.. .+..+.+++.+||+.+|++||++.++++.
T Consensus 221 ~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 221 PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 112223 56789999999999999999999999864
No 259
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.1e-34 Score=307.83 Aligned_cols=252 Identities=23% Similarity=0.345 Sum_probs=201.7
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC-CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG-SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
+|+..+.||+|+||.||++.....++.+|+|.+... ......++.+|++++.+++|+||+++++.+...+..++|+||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 577788999999999999999878899999988654 2233457899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCC-CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 555 ARGTLRDHLYNND-NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 555 ~~gsL~~~L~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
++++|.+++.... ...+++..+..++.+++.||.|||+ ..+++|+||||+||+++.++.+||+|||++......
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--- 156 (286)
T cd06622 82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS--- 156 (286)
T ss_pred CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC---
Confidence 9999999886532 2368999999999999999999994 358999999999999999999999999998753221
Q ss_pred cccccccCCCcccChhhhccC------CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccc
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQ------LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDII 707 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~------~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 707 (767)
......++..|+|||.+.+. .++.++|+|||||++|||++|+.||........ .... .....+.
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~~-~~~~~~~----- 226 (286)
T cd06622 157 -LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANI---FAQL-SAIVDGD----- 226 (286)
T ss_pred -ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhH---HHHH-HHHhhcC-----
Confidence 22234578899999998654 358899999999999999999999954322111 1100 0111111
Q ss_pred cccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 708 DPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 708 d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
....+..+..++.+++.+||+.+|.+||++.+++.
T Consensus 227 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 227 ----PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred ----CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 11234446778899999999999999999999986
No 260
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.4e-34 Score=301.55 Aligned_cols=247 Identities=25% Similarity=0.407 Sum_probs=201.4
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC-----CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS-----QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~-----~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
|...+.||+|++|.||+|....++..|++|.+.... .+..+.+.+|+++++.++|+|++++++++......++++
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL 81 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence 556678999999999999998777899999886432 234567899999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
||+++++|.+++.+. ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.+||+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~ 156 (258)
T cd06632 82 ELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS 156 (258)
T ss_pred EecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccceeccccc
Confidence 999999999999654 35899999999999999999999 7789999999999999999999999999987543222
Q ss_pred CccccccccCCCcccChhhhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccccc
Q 042216 632 KTHVSTQVKGSIGYLDPEYYRLQL-LTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPF 710 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~-~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 710 (767)
......++..|+|||.+.... ++.++|+|||||++|||++|+.||....... .. ........
T Consensus 157 ---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~--~~----~~~~~~~~-------- 219 (258)
T cd06632 157 ---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA--AV----FKIGRSKE-------- 219 (258)
T ss_pred ---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH--HH----HHHHhccc--------
Confidence 223455888999999988766 8999999999999999999999985543211 11 11001011
Q ss_pred ccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 711 LKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 711 l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
....+......+.+++.+||+.+|.+||++.+++.
T Consensus 220 -~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 220 -LPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred -CCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 11223345677899999999999999999999975
No 261
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-35 Score=289.58 Aligned_cols=254 Identities=23% Similarity=0.325 Sum_probs=205.5
Q ss_pred HHhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC----Ccchh----HHHHHHHHHhcc-ccceeeeEeeeee
Q 042216 472 EATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS----QQGAL----EFQTEIGMLSQL-RYLHLVSLIGYCN 542 (767)
Q Consensus 472 ~~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~----~~~~~----~f~~Ei~~l~~l-~Hpniv~l~g~~~ 542 (767)
..-+.|...++||.|..+.|-+..++.+++..|+|++.... ..... +-.+|+.+|+++ -||+|+.+.++++
T Consensus 14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye 93 (411)
T KOG0599|consen 14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE 93 (411)
T ss_pred hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence 34567888889999999999999999999999999985431 11122 346789999998 6999999999999
Q ss_pred cCCceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecC
Q 042216 543 DDGQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFG 622 (767)
Q Consensus 543 ~~~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfG 622 (767)
.+..+++|+|.|+.|.|+|+|.. .-.++++...+|+.|+.+|++||| ...|+||||||+|||+|++.++||+|||
T Consensus 94 s~sF~FlVFdl~prGELFDyLts--~VtlSEK~tR~iMrqlfegVeylH---a~~IVHRDLKpENILlddn~~i~isDFG 168 (411)
T KOG0599|consen 94 SDAFVFLVFDLMPRGELFDYLTS--KVTLSEKETRRIMRQLFEGVEYLH---ARNIVHRDLKPENILLDDNMNIKISDFG 168 (411)
T ss_pred CcchhhhhhhhcccchHHHHhhh--heeecHHHHHHHHHHHHHHHHHHH---HhhhhhcccChhheeeccccceEEeccc
Confidence 99999999999999999999954 345999999999999999999999 7889999999999999999999999999
Q ss_pred CcccCCCCCCccccccccCCCcccChhhhcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHH
Q 042216 623 LCKFGPNFSKTHVSTQVKGSIGYLDPEYYRL------QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATE 696 (767)
Q Consensus 623 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~ 696 (767)
+++..... ......+||++|+|||.++. ..|+...|+|+.||++|.|+.|.+||..... ...+ .
T Consensus 169 Fa~~l~~G---ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ--mlML-----R 238 (411)
T KOG0599|consen 169 FACQLEPG---EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ--MLML-----R 238 (411)
T ss_pred eeeccCCc---hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH--HHHH-----H
Confidence 99865442 33456899999999998864 4688899999999999999999999953211 1111 1
Q ss_pred HhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 697 CYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 697 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.+.+|+. ..+.+--.+.+....+|+.+||+.||.+|.|.+|+++
T Consensus 239 ~ImeGky------qF~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 239 MIMEGKY------QFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred HHHhccc------ccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 1112211 1122223345677889999999999999999999985
No 262
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.5e-34 Score=311.58 Aligned_cols=254 Identities=23% Similarity=0.273 Sum_probs=203.9
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC---cchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ---QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
++|+..+.||+|++|.||++...+.++.+|+|.+..... ...+.+.+|++++..++|+||+++++.+...+..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 367888899999999999999988789999999875432 24456889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
||+.+++|.+++.......+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 9999999999997655567999999999999999999999 7889999999999999999999999999986432211
Q ss_pred Cc---------------------------cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Q 042216 632 KT---------------------------HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGD 684 (767)
Q Consensus 632 ~~---------------------------~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~ 684 (767)
.. .......|+..|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 00 011123578899999999988899999999999999999999999965433
Q ss_pred ccchhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCC----HHHHHH
Q 042216 685 KKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPS----MSDVVW 746 (767)
Q Consensus 685 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs----~~evl~ 746 (767)
.. .+.. .. +...........+..+.+++.+||+.+|++||+ +.|++.
T Consensus 238 ~~--~~~~----~~---------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 238 DE--TFSN----IL---------KKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred HH--HHHH----Hh---------cCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 21 1111 01 111111111124678999999999999999999 666554
No 263
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=9.8e-35 Score=311.49 Aligned_cols=257 Identities=22% Similarity=0.295 Sum_probs=203.6
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
++|+..+.||+|+||.||++.....++.|++|.+.... ......+.+|+++++.++||||+++++.+..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888899999999999999998888899999986543 233456889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
||+++++|.+++... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||+++......
T Consensus 81 e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 81 EYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred ecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence 999999999999554 45899999999999999999999 7789999999999999999999999999987421100
Q ss_pred C-------------ccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHh
Q 042216 632 K-------------THVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECY 698 (767)
Q Consensus 632 ~-------------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~ 698 (767)
. ........++..|+|||.+....++.++|+|||||++|||++|+.||...... .+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~------~~~~~~~ 229 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE------ELFGQVI 229 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHH
Confidence 0 00112245788999999998888999999999999999999999999643321 1111111
Q ss_pred hcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 042216 699 RNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEF 750 (767)
Q Consensus 699 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~ 750 (767)
. +. ...+. .....+..+.+++.+||+.+|++||++.++.+.|+.
T Consensus 230 ~-~~---~~~~~----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 230 S-DD---IEWPE----GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred h-cc---cCCCC----ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 1 10 00111 111345678999999999999999997666666654
No 264
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.9e-34 Score=302.38 Aligned_cols=251 Identities=23% Similarity=0.430 Sum_probs=199.5
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC------cchhHHHHHHHHHhccccceeeeEeeeeecCCceEE
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ------QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMIL 549 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~------~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~l 549 (767)
+|...+.||+|+||.||+|... +++.+|+|.+..... .....+.+|++++++++|+||++++++|.+.+..++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI 79 (265)
T ss_pred CccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence 3566778999999999999875 457899998864321 123458899999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCC
Q 042216 550 VYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPN 629 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~ 629 (767)
++||+++++|.+++.+. ..+++..+..++.|++.||.||| +.+|+|+||+|+||++++++.+||+|||+++....
T Consensus 80 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 80 FMEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 99999999999999654 35889999999999999999999 77899999999999999999999999999875321
Q ss_pred CC----CccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccc
Q 042216 630 FS----KTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGD 705 (767)
Q Consensus 630 ~~----~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~ 705 (767)
.. .........++..|+|||++.+..++.++|||||||+++||++|+.||......+.. .. ......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~--~~---~~~~~~---- 225 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAM--FY---IGAHRG---- 225 (265)
T ss_pred ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHH--HH---hhhccC----
Confidence 11 111122345889999999999888999999999999999999999999654322111 00 000000
Q ss_pred cccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 706 IIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 706 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.....+...+.++.+++.+||+.+|.+||++.++++
T Consensus 226 -----~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 226 -----LMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred -----CCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 111223345677899999999999999999999874
No 265
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.2e-34 Score=307.22 Aligned_cols=262 Identities=19% Similarity=0.250 Sum_probs=200.5
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC--CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS--QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
+|+..+.||+|++|.||+|+....++.||||++.... ......+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4778889999999999999998888899999986542 22335688999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+. ++|.+++.......+++.++..++.|++.||+||| ..+++|+||+|+||++++++.+||+|||+++......
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~-- 154 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-- 154 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc--
Confidence 96 68999987665667999999999999999999999 7789999999999999999999999999987543211
Q ss_pred cccccccCCCcccChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhc------------
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQ-LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRN------------ 700 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~------------ 700 (767)
.......++..|+|||.+.+. .++.++|||||||++|||+||+.||....+.+ .+.......-..
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07860 155 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID--QLFRIFRTLGTPDEVVWPGVTSLP 232 (284)
T ss_pred cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHHHHhCCCChhhhhhhhHHH
Confidence 112233467899999988764 46889999999999999999999996543221 111111100000
Q ss_pred ---CCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 701 ---GKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 701 ---~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
..........+. ...+....++.+++.+||+.||.+||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 233 DYKPSFPKWARQDFS-KVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHHhhcccccccCHH-HHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 000000000000 011223456789999999999999999999974
No 266
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.3e-34 Score=339.42 Aligned_cols=256 Identities=19% Similarity=0.283 Sum_probs=200.7
Q ss_pred HHhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeec--CCce
Q 042216 472 EATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCND--DGQM 547 (767)
Q Consensus 472 ~~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~--~~~~ 547 (767)
....+|...+.||+|+||+||+++....+..+|+|.+... .......|..|+.+|.+|+||||+++++++.. ...+
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 3456899999999999999999999988889999998643 23345578999999999999999999998754 3568
Q ss_pred EEEEecCCCCChhhhhccC--CCCCCChHHHHHHHHHHHHHHHHhHhCC----CCCeEecCCCCCCeEECC---------
Q 042216 548 ILVYDYMARGTLRDHLYNN--DNPPLPWDRRLKICIGAARALHYLHTGA----SKVIIHRDVKTTNILLDE--------- 612 (767)
Q Consensus 548 ~lV~ey~~~gsL~~~L~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~----~~~iiH~Dlk~~NILld~--------- 612 (767)
+|||||+++|+|.++|... ....+++..++.|+.||+.||.|||+.. ..+|+||||||+||||+.
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 9999999999999999653 2346999999999999999999999532 146999999999999964
Q ss_pred --------CCcEEEeecCCcccCCCCCCccccccccCCCcccChhhhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 042216 613 --------EWVAKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRL--QLLTEKSDVYSFGVVLLEVLCARPPILRT 682 (767)
Q Consensus 613 --------~~~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~ksDV~SfGvvl~elltg~~P~~~~ 682 (767)
...+||+|||+++..... .......||+.|+|||++.. ..++.++|||||||+||||++|+.||...
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~---s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~ 246 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIE---SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKA 246 (1021)
T ss_pred ccccccCCCCceEEccCCcccccccc---ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcC
Confidence 345899999999754321 12234568999999999854 45889999999999999999999999644
Q ss_pred CCccchhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 683 GDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 683 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.... ..... +..+. .+ .....+.++.+|+..||+.+|.+||++.|++.
T Consensus 247 ~~~~-----qli~~-lk~~p-------~l---pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 247 NNFS-----QLISE-LKRGP-------DL---PIKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CcHH-----HHHHH-HhcCC-------CC---CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 3211 11111 11110 00 01123567899999999999999999999984
No 267
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-35 Score=336.93 Aligned_cols=261 Identities=28% Similarity=0.453 Sum_probs=211.8
Q ss_pred hccccceeeeccCcEEEEEEEecC-------CCceEEEEEeCCC-CCcchhHHHHHHHHHhcc-ccceeeeEeeeeecCC
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNG-------DSTPVAIKRLNPG-SQQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDG 545 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~-------~~~~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~ 545 (767)
+++...+.||+|.||.|++|...+ ....||||.++.. ...+.+.+..|+++|+.+ +|+|++.++|+|..++
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 334444489999999999998642 1467999999865 334567799999999998 6999999999999999
Q ss_pred ceEEEEecCCCCChhhhhccCC------------C--CCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEEC
Q 042216 546 QMILVYDYMARGTLRDHLYNND------------N--PPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLD 611 (767)
Q Consensus 546 ~~~lV~ey~~~gsL~~~L~~~~------------~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld 611 (767)
..++|+||+..|+|.++|+.+. . ..|+...++.++.|||.||+||+ +.+++||||.++|||+.
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~---~~~~vHRDLAaRNVLi~ 452 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA---SVPCVHRDLAARNVLIT 452 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh---hCCccchhhhhhhEEec
Confidence 9999999999999999997654 0 13889999999999999999999 78899999999999999
Q ss_pred CCCcEEEeecCCcccCCCCCCcccc-ccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchh
Q 042216 612 EEWVAKVSDFGLCKFGPNFSKTHVS-TQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVN 689 (767)
Q Consensus 612 ~~~~~ki~DfGla~~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~ 689 (767)
++..+||+|||+++...+....... ....-+..|||||.+....|+.|||||||||+||||++ |..||.+.... ..
T Consensus 453 ~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~--~~ 530 (609)
T KOG0200|consen 453 KNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT--EE 530 (609)
T ss_pred CCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH--HH
Confidence 9999999999999964432222111 11114567999999999999999999999999999998 88999653211 11
Q ss_pred HHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 042216 690 LAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQ 753 (767)
Q Consensus 690 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~ 753 (767)
+. +.+++| .+...|..|..+++++|+.||+.+|++||++.++++.|+.+++
T Consensus 531 l~----~~l~~G---------~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 531 LL----EFLKEG---------NRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred HH----HHHhcC---------CCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 12 223333 3345577889999999999999999999999999999999654
No 268
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.4e-34 Score=302.50 Aligned_cols=254 Identities=26% Similarity=0.376 Sum_probs=205.3
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeec--CCceEEEE
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCND--DGQMILVY 551 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~--~~~~~lV~ 551 (767)
+|+..+.||.|+||.||++....+++.+|+|++... .....+++.+|++++++++|+|++++++++.. +...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 467778999999999999999888889999998643 23345568899999999999999999998754 45679999
Q ss_pred ecCCCCChhhhhccC--CCCCCChHHHHHHHHHHHHHHHHhHhCC--CCCeEecCCCCCCeEECCCCcEEEeecCCcccC
Q 042216 552 DYMARGTLRDHLYNN--DNPPLPWDRRLKICIGAARALHYLHTGA--SKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFG 627 (767)
Q Consensus 552 ey~~~gsL~~~L~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~ 627 (767)
||+++++|.+++... ...++++..++.++.+++.||.|||..+ +.+++|+||||+||++++++.+||+|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999999998653 2456999999999999999999999554 678999999999999999999999999998865
Q ss_pred CCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccc
Q 042216 628 PNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDII 707 (767)
Q Consensus 628 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 707 (767)
.... .......++..|+|||.+....++.++|+||||+++++|++|+.||...... .+. .....+.
T Consensus 161 ~~~~--~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~----~~~~~~~----- 226 (265)
T cd08217 161 GHDS--SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL---QLA----SKIKEGK----- 226 (265)
T ss_pred cCCc--ccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH---HHH----HHHhcCC-----
Confidence 4322 1123346889999999999888999999999999999999999999654321 111 1111111
Q ss_pred cccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 708 DPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 708 d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
....+...+.++.+++.+|++.+|.+||++.+|++.
T Consensus 227 ----~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 227 ----FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred ----CCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 112344556789999999999999999999999863
No 269
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=8e-35 Score=315.88 Aligned_cols=256 Identities=23% Similarity=0.269 Sum_probs=198.5
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
++|...+.||+|+||.||+++....++.||+|.+... .......+.+|+.++..++|+||+++++++.+++..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 4688889999999999999999888889999998642 2223445788999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
||+++|+|.+++.+.. ..+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++......
T Consensus 81 Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred eCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCC
Confidence 9999999999996532 35899999999999999999999 7889999999999999999999999999987543211
Q ss_pred CccccccccCCCcccChhhhcc-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccc
Q 042216 632 KTHVSTQVKGSIGYLDPEYYRL-----QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDI 706 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 706 (767)
........|++.|+|||++.. +.++.++|||||||+||||++|+.||......+ .............
T Consensus 157 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~------~~~~i~~~~~~~~- 228 (331)
T cd05624 157 -TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE------TYGKIMNHEERFQ- 228 (331)
T ss_pred -ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHH------HHHHHHcCCCccc-
Confidence 112233569999999999875 567899999999999999999999996443211 1111111100000
Q ss_pred ccccccCCCChhhHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 042216 707 IDPFLKGNAPPVCLNQFVEVAMSCVNDDRIR--RPSMSDVVWG 747 (767)
Q Consensus 707 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~--RPs~~evl~~ 747 (767)
+ .......++++.+++.+|++.++.+ |++++++++.
T Consensus 229 ----~-p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 229 ----F-PSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred ----C-CCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 0 0011224567889999988865544 4688888753
No 270
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.9e-34 Score=305.66 Aligned_cols=262 Identities=20% Similarity=0.260 Sum_probs=198.1
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC--CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS--QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
+|+..+.||+|+||.||+|.....++.+|+|++.... ......+.+|++++++++|||++++++++.+.+..++++||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 3677789999999999999998888999999986432 22234678899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
++ ++|.+++.... ..+++..+..++.|+++||.||| ..+++||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-- 153 (284)
T cd07839 81 CD-QDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV-- 153 (284)
T ss_pred CC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC--
Confidence 97 48888876433 45899999999999999999999 7889999999999999999999999999987532211
Q ss_pred cccccccCCCcccChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcC------Ccccc
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQ-LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNG------KIGDI 706 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~------~~~~~ 706 (767)
.......++..|+|||.+.+. .++.++|||||||++|||++|+.|+....... ..+. ......... .+...
T Consensus 154 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07839 154 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD-DQLK-RIFRLLGTPTEESWPGVSKL 231 (284)
T ss_pred CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHH-HHHH-HHHHHhCCCChHHhHHhhhc
Confidence 112234578899999998764 47899999999999999999998864433211 1111 010000000 00000
Q ss_pred cccc----cc-----CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 707 IDPF----LK-----GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 707 ~d~~----l~-----~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.+.. .. ....+..+.++.+++.+||+.||.+|||++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 232 PDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred ccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 0000 00 0112234677889999999999999999999975
No 271
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=3.5e-34 Score=300.51 Aligned_cols=251 Identities=22% Similarity=0.330 Sum_probs=198.5
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC-----CcchhHHHHHHHHHhccccceeeeEeeeeecC--Cce
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS-----QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDD--GQM 547 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~-----~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~--~~~ 547 (767)
.+|...++||+|+||.||+|...+++..||||.+.... ....+.+.+|++++++++||||+++++++.+. ..+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46888889999999999999998888999999875321 12345688899999999999999999988663 467
Q ss_pred EEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccC
Q 042216 548 ILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFG 627 (767)
Q Consensus 548 ~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~ 627 (767)
+++|||+++++|.+++.+. ..+++...+.++.|++.||.||| +.+++|+||||+||+++.++.++|+|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~ 156 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGDFGASKRL 156 (265)
T ss_pred EEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEecCCCCEEECcCcccccc
Confidence 8999999999999998654 34788999999999999999999 778999999999999999999999999998754
Q ss_pred CCCCCc-cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccc
Q 042216 628 PNFSKT-HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDI 706 (767)
Q Consensus 628 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 706 (767)
...... .......++..|+|||.+.+..++.++|||||||++|||++|+.||....... . ........
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-----~-~~~~~~~~----- 225 (265)
T cd06652 157 QTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMA-----A-IFKIATQP----- 225 (265)
T ss_pred ccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHH-----H-HHHHhcCC-----
Confidence 321111 11223458889999999988889999999999999999999999996432211 1 01111000
Q ss_pred ccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 707 IDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 707 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.....+......+.+++.+|+. +|.+||+++||++
T Consensus 226 ----~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 226 ----TNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred ----CCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 1122344556678889999995 8999999999974
No 272
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.1e-34 Score=303.84 Aligned_cols=252 Identities=25% Similarity=0.341 Sum_probs=204.1
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
+|+..+.||+|++|.||++..+..++.+|+|++.... .....++.+|++++++++||||+++++.+..++..++++||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 5667778999999999999998888999999987653 344567899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCC-CCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGAS-KVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~-~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
++++|.+++.... ..+++..+..++.|++.||.||| + .+++|+||||+||++++++.++|+|||++......
T Consensus 82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~--- 154 (265)
T cd06605 82 DGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS--- 154 (265)
T ss_pred CCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHH---
Confidence 9999999996543 56899999999999999999999 6 88999999999999999999999999998643211
Q ss_pred cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccC
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKG 713 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 713 (767)
......++..|+|||.+.+..++.++||||||+++++|++|+.||....... ........... .+.. .
T Consensus 155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~-~~~~---------~ 222 (265)
T cd06605 155 -LAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPP-DGIFELLQYIV-NEPP---------P 222 (265)
T ss_pred -HhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccc-ccHHHHHHHHh-cCCC---------C
Confidence 1112568889999999999999999999999999999999999996543211 11112111111 1110 0
Q ss_pred CCChh-hHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 714 NAPPV-CLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 714 ~~~~~-~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
..+.. .+.++.+++.+||..+|++|||+.+++.
T Consensus 223 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 223 RLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred CCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 11112 5667899999999999999999999975
No 273
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6e-34 Score=302.57 Aligned_cols=258 Identities=24% Similarity=0.323 Sum_probs=203.0
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC-cchhHHHHHHHHHhccccceeeeEeeeeecC--CceEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ-QGALEFQTEIGMLSQLRYLHLVSLIGYCNDD--GQMILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~--~~~~lV~ 551 (767)
++|...+.||.|++|.||++.....++.+|+|.+..... ....++.+|++++++++||||+++++++.+. +..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 367888899999999999999988889999999875432 3456789999999999999999999988653 4789999
Q ss_pred ecCCCCChhhhhcc--CCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCC
Q 042216 552 DYMARGTLRDHLYN--NDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPN 629 (767)
Q Consensus 552 ey~~~gsL~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~ 629 (767)
||+++++|.+++.. .....+++..+..++.|++.||.||| ..+++|+||+|+||++++++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 99999999988753 23456899999999999999999999 78899999999999999999999999999865322
Q ss_pred CCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--ccchhHHHHHHHHhhcCCccccc
Q 042216 630 FSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGD--KKQVNLAVWATECYRNGKIGDII 707 (767)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~ 707 (767)
. ......++..|+|||.+.+..++.++|||||||++|||++|+.||..... .....+..+... .....+.
T Consensus 158 ~----~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 229 (287)
T cd06621 158 S----LAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVN----MPNPELK 229 (287)
T ss_pred c----ccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhc----CCchhhc
Confidence 1 11234578899999999999999999999999999999999999965432 111222222111 1111111
Q ss_pred cccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 708 DPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 708 d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
+. . ......++.+.+++.+||+.+|.+|||+.||++
T Consensus 230 ~~-~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 230 DE-P--GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred cC-C--CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 00 0 001224567899999999999999999999986
No 274
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.2e-34 Score=299.07 Aligned_cols=253 Identities=27% Similarity=0.311 Sum_probs=209.7
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
..|..++.||+|.-|+||++.+++....+|+|++.+.. .+...+.+.|-+||+.+.||.+..|++.++.+...+|+|
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 34666778999999999999999988999999997653 344556788999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCC--
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPN-- 629 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~-- 629 (767)
|||+||+|..++++...+.+++..+.-++..++.||+||| ..|||.|||||+||||-++|.+-|+||.|+.....
T Consensus 157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~P 233 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP 233 (459)
T ss_pred ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence 9999999999998888888999999999999999999999 89999999999999999999999999999743110
Q ss_pred -------------------------------CCCc---------------------cccccccCCCcccChhhhccCCCC
Q 042216 630 -------------------------------FSKT---------------------HVSTQVKGSIGYLDPEYYRLQLLT 657 (767)
Q Consensus 630 -------------------------------~~~~---------------------~~~~~~~gt~~y~aPE~~~~~~~s 657 (767)
.... ..+...+||-.|+|||++++...+
T Consensus 234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg 313 (459)
T KOG0610|consen 234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG 313 (459)
T ss_pred eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence 0000 011234688999999999999999
Q ss_pred chhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCC
Q 042216 658 EKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIR 737 (767)
Q Consensus 658 ~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~ 737 (767)
.+.|.|+|||+||||+.|..||.+....+. +. +++-..+.-...+..+..+.+||++.|.+||.+
T Consensus 314 sAVDWWtfGIflYEmLyG~TPFKG~~~~~T--l~-------------NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~k 378 (459)
T KOG0610|consen 314 SAVDWWTFGIFLYEMLYGTTPFKGSNNKET--LR-------------NIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSK 378 (459)
T ss_pred chhhHHHHHHHHHHHHhCCCCcCCCCchhh--HH-------------HHhcCCCcCCCCCcchhHHHHHHHHHhccChhh
Confidence 999999999999999999999987765432 22 222222222223355678899999999999999
Q ss_pred CCC----HHHHH
Q 042216 738 RPS----MSDVV 745 (767)
Q Consensus 738 RPs----~~evl 745 (767)
|.. +.||-
T Consensus 379 Rlg~~rGA~eIK 390 (459)
T KOG0610|consen 379 RLGSKRGAAEIK 390 (459)
T ss_pred hhccccchHHhh
Confidence 997 77775
No 275
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=6.3e-35 Score=318.36 Aligned_cols=261 Identities=21% Similarity=0.258 Sum_probs=197.5
Q ss_pred HHHhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC--CcchhHHHHHHHHHhccccceeeeEeeeeecC----
Q 042216 471 KEATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS--QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDD---- 544 (767)
Q Consensus 471 ~~~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~---- 544 (767)
....++|...+.||+|+||.||+|....+++.||||++.... ......+.+|+++|++++||||+++++++...
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 11 WEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence 345678999999999999999999998888899999986532 22345678999999999999999999987533
Q ss_pred --CceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecC
Q 042216 545 --GQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFG 622 (767)
Q Consensus 545 --~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfG 622 (767)
...++++|++ +++|.+++.. ..+++..+..++.|++.||.||| +++|+||||||+|||+++++.+||+|||
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg 163 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFG 163 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhhEEECCCCCEEEcCCc
Confidence 4578999988 6799887743 35899999999999999999999 7889999999999999999999999999
Q ss_pred CcccCCCCCCccccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcC
Q 042216 623 LCKFGPNFSKTHVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNG 701 (767)
Q Consensus 623 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~ 701 (767)
+++.... ......||..|+|||++.+ ..++.++|||||||++|||++|+.||........ +..+. ......
T Consensus 164 ~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~-~~~~~~ 235 (343)
T cd07878 164 LARQADD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQ--LKRIM-EVVGTP 235 (343)
T ss_pred cceecCC-----CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH--HHHHH-HHhCCC
Confidence 9875432 1233468899999999876 5789999999999999999999999965432111 11110 000000
Q ss_pred -----------C-------ccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 702 -----------K-------IGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 702 -----------~-------~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
. +.......+.. ........+.+++.+|++.||.+|||+.|++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 236 SPEVLKKISSEHARKYIQSLPHMPQQDLKK-IFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred CHHHHHhcchhhHHHHhhccccccchhHHH-hccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 00000000000 001123457899999999999999999999953
No 276
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.6e-34 Score=308.69 Aligned_cols=246 Identities=20% Similarity=0.312 Sum_probs=199.8
Q ss_pred ceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCCh
Q 042216 480 LLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGTL 559 (767)
Q Consensus 480 ~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gsL 559 (767)
...||+|+||.||++....+++.||+|.+..........+.+|+.++..++|||++++++++..++..++++||+++++|
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L 105 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL 105 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence 34699999999999999877889999998765555566788999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccccc
Q 042216 560 RDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQV 639 (767)
Q Consensus 560 ~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~ 639 (767)
.+++.. ..+++.++..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||++....... ......
T Consensus 106 ~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~--~~~~~~ 177 (297)
T cd06659 106 TDIVSQ---TRLNEEQIATVCESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV--PKRKSL 177 (297)
T ss_pred HHHHhh---cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhHhhccccc--ccccce
Confidence 998743 35899999999999999999999 7889999999999999999999999999987543211 112335
Q ss_pred cCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhh
Q 042216 640 KGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVC 719 (767)
Q Consensus 640 ~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 719 (767)
.++..|+|||++.+..++.++|||||||+++||++|+.||......+. ... ...... +.. ......
T Consensus 178 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~---~~~----~~~~~~-----~~~--~~~~~~ 243 (297)
T cd06659 178 VGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQA---MKR----LRDSPP-----PKL--KNAHKI 243 (297)
T ss_pred ecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHH----HhccCC-----CCc--cccCCC
Confidence 688999999999988999999999999999999999999964432211 111 111100 000 112234
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 720 LNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 720 ~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
...+.+++.+||+.+|.+||++.++++.
T Consensus 244 ~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 244 SPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred CHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 5678899999999999999999999973
No 277
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=4.8e-34 Score=304.85 Aligned_cols=262 Identities=21% Similarity=0.276 Sum_probs=200.4
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCc-----chhHHHHHHHHHhccccceeeeEeeeeecCCceEEE
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQ-----GALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILV 550 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~-----~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV 550 (767)
+|+..+.||+|++|.||+|....+++.||||++...... ....+..|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 366778899999999999999877889999999755322 234567899999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCC
Q 042216 551 YDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNF 630 (767)
Q Consensus 551 ~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~ 630 (767)
|||+ +|+|.+++.... ..+++..++.++.|+++||.||| +.+++|+||||+|||++.++.+||+|||+++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSP 155 (298)
T ss_pred Eccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEEccceeeeeccCC
Confidence 9999 889999996543 36999999999999999999999 788999999999999999999999999998764332
Q ss_pred CCccccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhc---------
Q 042216 631 SKTHVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRN--------- 700 (767)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~--------- 700 (767)
.. ......++..|+|||.+.+ ..++.++|||||||+++||++|.+||....+.+. +... ......
T Consensus 156 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~ 230 (298)
T cd07841 156 NR--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQ--LGKI-FEALGTPTEENWPGV 230 (298)
T ss_pred Cc--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHH--HHHH-HHHcCCCchhhhhhc
Confidence 11 1222346788999998864 4678999999999999999999887754433211 1111 100000
Q ss_pred CCccccccccccCC-----CChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 701 GKIGDIIDPFLKGN-----APPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 701 ~~~~~~~d~~l~~~-----~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
.............. .....+.++.+++.+||+.+|.+|||+.||++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 231 TSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00000000000000 112346778999999999999999999999873
No 278
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.9e-34 Score=305.37 Aligned_cols=251 Identities=24% Similarity=0.364 Sum_probs=195.4
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC-CcchhHHHHHHHH-HhccccceeeeEeeeeecCCceEEEEe
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS-QQGALEFQTEIGM-LSQLRYLHLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~-~~~~~~f~~Ei~~-l~~l~Hpniv~l~g~~~~~~~~~lV~e 552 (767)
++|+..+.||+|+||.||++....+++.||+|++.... .....++..|+.. ++.++|||++++++++..++..+++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 36888899999999999999998888999999987543 2233456667665 556789999999999999999999999
Q ss_pred cCCCCChhhhhccC--CCCCCChHHHHHHHHHHHHHHHHhHhCCCC-CeEecCCCCCCeEECCCCcEEEeecCCcccCCC
Q 042216 553 YMARGTLRDHLYNN--DNPPLPWDRRLKICIGAARALHYLHTGASK-VIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPN 629 (767)
Q Consensus 553 y~~~gsL~~~L~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~ 629 (767)
|++ |+|.+++... ....+++..++.++.|++.||.||| ++ +++||||||+|||++.++.+||+|||+++....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 997 6888877542 2356899999999999999999999 54 899999999999999999999999999875422
Q ss_pred CCCccccccccCCCcccChhhhcc----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccc
Q 042216 630 FSKTHVSTQVKGSIGYLDPEYYRL----QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGD 705 (767)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~~----~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~ 705 (767)
........++..|+|||.+.+ ..++.++|+|||||++|||++|+.||...... ...+.. ... +..
T Consensus 157 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~----~~~-~~~-- 225 (283)
T cd06617 157 ---SVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP-FQQLKQ----VVE-EPS-- 225 (283)
T ss_pred ---ccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC-HHHHHH----HHh-cCC--
Confidence 112233457889999998864 45688999999999999999999998543221 011111 111 100
Q ss_pred cccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 706 IIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 706 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
+.+ .....+.++.+++.+||..+|.+||++.++++
T Consensus 226 ---~~~---~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 226 ---PQL---PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred ---CCC---CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 001 01234577899999999999999999999986
No 279
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-34 Score=311.41 Aligned_cols=251 Identities=23% Similarity=0.290 Sum_probs=211.5
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCc---chhHHHHHHHHHhccc-cceeeeEeeeeecCCceEE
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQ---GALEFQTEIGMLSQLR-YLHLVSLIGYCNDDGQMIL 549 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~---~~~~f~~Ei~~l~~l~-Hpniv~l~g~~~~~~~~~l 549 (767)
...|+..+.||+|.||.||+++.+.+++.+|+|.+.+.... ....+.+|+.+|+++. ||||+.+.+.++.....++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 44566667899999999999999998999999999765433 3457899999999998 9999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECC----CCcEEEeecCCcc
Q 042216 550 VYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDE----EWVAKVSDFGLCK 625 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~----~~~~ki~DfGla~ 625 (767)
|||++.+|.|.+.+... .+++.....++.|++.++.||| +.+|+||||||+|+|+.. ++.+|++|||++.
T Consensus 114 vmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~ 187 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLH---SLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAK 187 (382)
T ss_pred EEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHH---hCCceeccCCHHHeeeccccCCCCcEEEeeCCCce
Confidence 99999999999999766 2899999999999999999999 789999999999999953 3579999999998
Q ss_pred cCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccc
Q 042216 626 FGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGD 705 (767)
Q Consensus 626 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~ 705 (767)
.... .......+||+.|+|||++....++..+||||+||++|.|++|.+||....+.+... ....+..
T Consensus 188 ~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-------~i~~~~~-- 255 (382)
T KOG0032|consen 188 FIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-------AILRGDF-- 255 (382)
T ss_pred EccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-------HHHcCCC--
Confidence 7544 345567889999999999999999999999999999999999999997665432211 1122221
Q ss_pred cccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 706 IIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 706 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
......-+..+..+.+++..|+..||.+|+|+.++++
T Consensus 256 ----~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 256 ----DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred ----CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 1222233445778899999999999999999999987
No 280
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=3.6e-34 Score=308.73 Aligned_cols=196 Identities=25% Similarity=0.378 Sum_probs=159.5
Q ss_pred eeeeccCcEEEEEEEecC--CCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeec--CCceEEEEecCCC
Q 042216 481 LIIGRGGFGNVYKGFLNG--DSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCND--DGQMILVYDYMAR 556 (767)
Q Consensus 481 ~~LG~G~fG~Vy~g~~~~--~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~--~~~~~lV~ey~~~ 556 (767)
.+||+|+||+||+|..++ .++.+|+|.+.... ....+.+|+++|++++||||+++++++.. +...++++||+.+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH 84 (317)
T ss_pred cccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC
Confidence 479999999999999753 45789999986432 23457889999999999999999998854 4568899999865
Q ss_pred CChhhhhccC-------CCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEE----CCCCcEEEeecCCcc
Q 042216 557 GTLRDHLYNN-------DNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILL----DEEWVAKVSDFGLCK 625 (767)
Q Consensus 557 gsL~~~L~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl----d~~~~~ki~DfGla~ 625 (767)
+|.+++... ....+++..+..++.|++.||.||| +.+|+||||||+|||+ +.++.+||+|||+++
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07868 85 -DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred -CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence 888877432 1235889999999999999999999 7889999999999999 466799999999998
Q ss_pred cCCCCCCc-cccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 042216 626 FGPNFSKT-HVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRT 682 (767)
Q Consensus 626 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~ 682 (767)
........ .......||+.|+|||++.+ ..++.++||||+||++|||++|++||...
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 64322111 12234568999999999876 46899999999999999999999999644
No 281
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=2.2e-34 Score=302.95 Aligned_cols=254 Identities=24% Similarity=0.349 Sum_probs=202.3
Q ss_pred HhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhcc-ccceeeeEeeeeecCC------
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDG------ 545 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~------ 545 (767)
.+++|+..+.||+|++|.||+|..+..++.+++|.+..... ...++.+|+++++++ +|+||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 46789999999999999999999987788999999875433 346789999999999 6999999999997644
Q ss_pred ceEEEEecCCCCChhhhhccCC--CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCC
Q 042216 546 QMILVYDYMARGTLRDHLYNND--NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGL 623 (767)
Q Consensus 546 ~~~lV~ey~~~gsL~~~L~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGl 623 (767)
..++||||+++++|.+++.... ...+++..+..++.|++.||.||| +.+++|+||+|+||++++++.+||+|||+
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~~l~d~~~ 159 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLVDFGV 159 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEEccCCeEEECCCcc
Confidence 4899999999999999986533 457899999999999999999999 78899999999999999999999999999
Q ss_pred cccCCCCCCccccccccCCCcccChhhhcc-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHh
Q 042216 624 CKFGPNFSKTHVSTQVKGSIGYLDPEYYRL-----QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECY 698 (767)
Q Consensus 624 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~ 698 (767)
+...... ........++..|+|||.+.. ..++.++|||||||+++||++|+.||....... .+.. .
T Consensus 160 ~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~-----~ 230 (275)
T cd06608 160 SAQLDST--LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR--ALFK-----I 230 (275)
T ss_pred ceecccc--hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH--HHHH-----h
Confidence 8754321 112233458889999998753 356789999999999999999999996432211 1111 1
Q ss_pred hcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 699 RNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 699 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
..... +.+ ..+...+.++.+++.+||..||++|||+.|+++
T Consensus 231 ~~~~~-----~~~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 231 PRNPP-----PTL--KSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred hccCC-----CCC--CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11111 011 112335668899999999999999999999975
No 282
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2.6e-34 Score=304.59 Aligned_cols=262 Identities=21% Similarity=0.276 Sum_probs=202.4
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC--CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS--QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
+|...+.||+|++|.||+|....+++.||+|++.... ......+.+|+.++++++|||++++++++..+...++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4677789999999999999998788999999987543 33346789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+ +++|.+++.... ..+++.++..++.|+++||.||| +.+++|+||||+||+++.++.++|+|||++........
T Consensus 81 ~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~- 154 (286)
T cd07832 81 M-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP- 154 (286)
T ss_pred c-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-
Confidence 9 999999986544 56999999999999999999999 78899999999999999999999999999876533221
Q ss_pred cccccccCCCcccChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCC----------
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQ-LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGK---------- 702 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~---------- 702 (767)
.......++..|+|||.+.+. .++.++||||+||+++||++|++||....+.+. ..+.........
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07832 155 RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQ---LAIVFRTLGTPNEETWPGLTSL 231 (286)
T ss_pred CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHH---HHHHHHHcCCCChHHHhhccCc
Confidence 112334688899999988654 468999999999999999999888755433211 111111110000
Q ss_pred --cccccccccc----CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 703 --IGDIIDPFLK----GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 703 --~~~~~d~~l~----~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
...+..+... ....+.....+.+++.+|++.+|.+||+++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 232 PDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred chhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0000000000 0011234578899999999999999999999975
No 283
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=3.4e-34 Score=300.73 Aligned_cols=254 Identities=22% Similarity=0.348 Sum_probs=202.5
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC------cchhHHHHHHHHHhccccceeeeEeeeeecCCceEE
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ------QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMIL 549 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~------~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~l 549 (767)
+|+..+.||+|++|.||++....+++.+|+|.+..... ...+.+.+|++++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 46777899999999999999887889999999864321 124578999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCC-cEEEeecCCcccCC
Q 042216 550 VYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEW-VAKVSDFGLCKFGP 628 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~-~~ki~DfGla~~~~ 628 (767)
|+||+++++|.+++.+. .++++..+..++.|++.||.||| +.+++|+||||+||+++.++ .+||+|||++....
T Consensus 81 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~ 155 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLA 155 (268)
T ss_pred EEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence 99999999999999653 46899999999999999999999 78899999999999998775 69999999987543
Q ss_pred CCCC--ccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccc
Q 042216 629 NFSK--THVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDI 706 (767)
Q Consensus 629 ~~~~--~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 706 (767)
.... ........++..|+|||.+.+..++.++||||+|++++||++|+.||......... .........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~---~~~~~~~~~------ 226 (268)
T cd06630 156 AKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHL---ALIFKIASA------ 226 (268)
T ss_pred cccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchH---HHHHHHhcc------
Confidence 3211 11122345788999999998888999999999999999999999998543321111 111110000
Q ss_pred ccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 707 IDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 707 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
......+.....++.+++.+|++.+|.+||++.++++
T Consensus 227 ---~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 227 ---TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred ---CCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 1112234455678899999999999999999999974
No 284
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=5.1e-34 Score=301.44 Aligned_cols=247 Identities=26% Similarity=0.372 Sum_probs=201.9
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCC
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMA 555 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~ 555 (767)
|+..+.||+|+||.||+|....++..+|+|.+.... ......+.+|++++.+++||||+++++++.++...++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 667778999999999999988778899999886442 3344578899999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccc
Q 042216 556 RGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHV 635 (767)
Q Consensus 556 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~ 635 (767)
+++|.+++.. ..+++..+..++.+++.++.||| ..+++|+||||+||+++.++.++|+|||++....... ..
T Consensus 86 ~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~--~~ 157 (277)
T cd06641 86 GGSALDLLEP---GPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IK 157 (277)
T ss_pred CCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecccceecccch--hh
Confidence 9999999853 35899999999999999999999 7889999999999999999999999999987543211 11
Q ss_pred cccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCC
Q 042216 636 STQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNA 715 (767)
Q Consensus 636 ~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 715 (767)
.....++..|+|||.+....++.++|+|||||++|||++|..|+....... +... ..... ....
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~------~~~~-~~~~~---------~~~~ 221 (277)
T cd06641 158 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK------VLFL-IPKNN---------PPTL 221 (277)
T ss_pred hccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH------HHHH-HhcCC---------CCCC
Confidence 223457889999999998889999999999999999999999986433211 1111 11111 1112
Q ss_pred ChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 716 PPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 716 ~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
+...+.++.+++.+||+.+|.+||++.++++.
T Consensus 222 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 222 EGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 23456678899999999999999999999974
No 285
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=3.8e-34 Score=304.55 Aligned_cols=263 Identities=20% Similarity=0.284 Sum_probs=197.8
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCc-chhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQ-GALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~-~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
++|+..+.||+|++|.||+|+.+.+++.||||.+...... ....+.+|++++++++|+||+++++++.+++..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 5688888999999999999999877889999998654322 234577899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+++ +|.+++.+... .+++.....++.|+++||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 85 ~~~-~L~~~~~~~~~-~~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-- 157 (291)
T cd07844 85 LDT-DLKQYMDDCGG-GLSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPS-- 157 (291)
T ss_pred CCC-CHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECccccccccCCCC--
Confidence 985 99998865433 6899999999999999999999 7889999999999999999999999999987432111
Q ss_pred cccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhc---CCccc----
Q 042216 634 HVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRN---GKIGD---- 705 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~---~~~~~---- 705 (767)
.......++..|+|||.+.+ ..++.++||||||+++|||++|+.||........ ........... .....
T Consensus 158 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 235 (291)
T cd07844 158 KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVED--QLHKIFRVLGTPTEETWPGVSSN 235 (291)
T ss_pred ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH--HHHHHHHhcCCCChhhhhhhhhc
Confidence 11122346788999999875 4688999999999999999999999964432111 00000110000 00000
Q ss_pred --cc--------cccccCCCC-hhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 706 --II--------DPFLKGNAP-PVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 706 --~~--------d~~l~~~~~-~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.. ...+....+ .....++.+++.+||+.+|.+|||+.+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 236 PEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred cccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 00 000000000 011256789999999999999999999874
No 286
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=6e-34 Score=298.05 Aligned_cols=253 Identities=25% Similarity=0.339 Sum_probs=202.3
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC--cchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ--QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~--~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
+|+..+.||+|+||.||+|....+++.+++|.+..... ...+.+.+|++++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 46777899999999999999987788999999876543 2566799999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+++++|.+++... ..+++..+..++.+++.||.||| +.+++|+||+|+||++++++.+||+|||++.........
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 81 CSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred CCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence 9999999999654 35889999999999999999999 788999999999999999999999999998764332221
Q ss_pred cc--cccccCCCcccChhhhccCC---CCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccc
Q 042216 634 HV--STQVKGSIGYLDPEYYRLQL---LTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIID 708 (767)
Q Consensus 634 ~~--~~~~~gt~~y~aPE~~~~~~---~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 708 (767)
.. .....++..|+|||++.... .+.++||||||++++||++|+.||........ .... ...+. .
T Consensus 156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~--~~~~----~~~~~-----~ 224 (264)
T cd06626 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ--IMFH----VGAGH-----K 224 (264)
T ss_pred ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH--HHHH----HhcCC-----C
Confidence 11 11345788999999998766 88999999999999999999999964432111 1110 00010 0
Q ss_pred ccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 709 PFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 709 ~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
+.+. ........+.+++.+||+.+|.+||++.|++.
T Consensus 225 ~~~~--~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 225 PPIP--DSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred CCCC--cccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0110 11123567889999999999999999999864
No 287
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2.8e-34 Score=299.24 Aligned_cols=250 Identities=22% Similarity=0.375 Sum_probs=203.8
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
+|...+.||+|+||.||+|..+.++..+|+|.+... .....+.+.+|+++++.++|+|++++++.+...+..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 467788999999999999999888889999998643 223445688999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCC-cEEEeecCCcccCCCCCC
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEW-VAKVSDFGLCKFGPNFSK 632 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~-~~ki~DfGla~~~~~~~~ 632 (767)
+++++|.+++.+.....+++..+..++.|++.||.||| +.+++|+||||+||++++++ .+||+|||.+......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~-- 155 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS-- 155 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEecccccchhccCC--
Confidence 99999999997665556899999999999999999999 77899999999999999875 5699999998754321
Q ss_pred ccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccccccc
Q 042216 633 THVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLK 712 (767)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 712 (767)
........|+..|+|||++....++.++||||||++++||++|+.||..... ..+...... +..
T Consensus 156 ~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~-~~~--------- 219 (257)
T cd08225 156 MELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL------HQLVLKICQ-GYF--------- 219 (257)
T ss_pred cccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH------HHHHHHHhc-ccC---------
Confidence 1122234588899999999888899999999999999999999999854321 122222111 111
Q ss_pred CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 713 GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 713 ~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
...++..+..+.+++.+||+.+|++|||+.|+++
T Consensus 220 ~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 220 APISPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 1122344567899999999999999999999975
No 288
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.2e-34 Score=308.82 Aligned_cols=246 Identities=20% Similarity=0.335 Sum_probs=199.2
Q ss_pred ceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCCh
Q 042216 480 LLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGTL 559 (767)
Q Consensus 480 ~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gsL 559 (767)
...||+|+||.||++....++..||||.+..........+.+|+.+++.++|+|++++++.+...+..++||||+++++|
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L 106 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL 106 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence 34699999999999999877889999998765555566789999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccccc
Q 042216 560 RDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQV 639 (767)
Q Consensus 560 ~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~ 639 (767)
.+++.. ..+++.++..++.|++.||.||| +.+|+||||||+||++++++.+||+|||++....... ......
T Consensus 107 ~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~--~~~~~~ 178 (292)
T cd06658 107 TDIVTH---TRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV--PKRKSL 178 (292)
T ss_pred HHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcchhhccccc--ccCcee
Confidence 998843 24899999999999999999999 7789999999999999999999999999987543211 112234
Q ss_pred cCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhh
Q 042216 640 KGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVC 719 (767)
Q Consensus 640 ~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 719 (767)
.++..|+|||.+....++.++||||||++++||++|+.||........ .. .... ...+.+.. ....
T Consensus 179 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~---~~----~~~~-----~~~~~~~~--~~~~ 244 (292)
T cd06658 179 VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA---MR----RIRD-----NLPPRVKD--SHKV 244 (292)
T ss_pred ecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HH----HHHh-----cCCCcccc--cccc
Confidence 588999999999888899999999999999999999999864332111 11 0111 01111111 1123
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 720 LNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 720 ~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
...+.+++.+||+.||.+|||+.|+++.
T Consensus 245 ~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 245 SSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 4568899999999999999999999864
No 289
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=4.7e-35 Score=317.64 Aligned_cols=241 Identities=26% Similarity=0.311 Sum_probs=188.6
Q ss_pred eeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhcc---ccceeeeEeeeeecCCceEEEEecCCC
Q 042216 483 IGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQL---RYLHLVSLIGYCNDDGQMILVYDYMAR 556 (767)
Q Consensus 483 LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l---~Hpniv~l~g~~~~~~~~~lV~ey~~~ 556 (767)
||+|+||+||+|+....++.||||++.... ......+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999998888999999986431 22233455677776655 699999999999999999999999999
Q ss_pred CChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcccc
Q 042216 557 GTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVS 636 (767)
Q Consensus 557 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~ 636 (767)
|+|.+++.+. ..+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++.... .....
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~--~~~~~ 153 (330)
T cd05586 81 GELFWHLQKE--GRFSEDRAKFYIAELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKANLT--DNKTT 153 (330)
T ss_pred ChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCC--CCCCc
Confidence 9999998653 45899999999999999999999 78899999999999999999999999999875322 11223
Q ss_pred ccccCCCcccChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCC
Q 042216 637 TQVKGSIGYLDPEYYRLQ-LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNA 715 (767)
Q Consensus 637 ~~~~gt~~y~aPE~~~~~-~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 715 (767)
....||..|+|||++.+. .++.++|||||||++|||++|+.||......+ ... ....+.. .+.
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~------~~~-~i~~~~~------~~~--- 217 (330)
T cd05586 154 NTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQ------MYR-NIAFGKV------RFP--- 217 (330)
T ss_pred cCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHH------HHH-HHHcCCC------CCC---
Confidence 345699999999998754 58999999999999999999999996543211 111 1111110 010
Q ss_pred ChhhHHHHHHHHHHccccCCCCCC----CHHHHHH
Q 042216 716 PPVCLNQFVEVAMSCVNDDRIRRP----SMSDVVW 746 (767)
Q Consensus 716 ~~~~~~~l~~li~~Cl~~dp~~RP----s~~evl~ 746 (767)
....+.++.+++.+||+.||.+|| ++.++++
T Consensus 218 ~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 218 KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 112356778999999999999998 4666654
No 290
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=6.1e-34 Score=302.27 Aligned_cols=249 Identities=20% Similarity=0.341 Sum_probs=202.4
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCC
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMA 555 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~ 555 (767)
.|...+.||+|++|.||++....+++.+++|++........+.+.+|+.+++.++|+|++++++++...+..++++||++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 34555689999999999999887788999999875555556678999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccc
Q 042216 556 RGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHV 635 (767)
Q Consensus 556 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~ 635 (767)
+++|.+++.. ..+++.++..++.|++.||.||| +.+++||||+|+||+++.++.++|+|||++...... ...
T Consensus 100 ~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~--~~~ 171 (285)
T cd06648 100 GGALTDIVTH---TRMNEEQIATVCLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE--VPR 171 (285)
T ss_pred CCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEcccccchhhccC--Ccc
Confidence 9999999865 35899999999999999999999 788999999999999999999999999987654321 111
Q ss_pred cccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCC
Q 042216 636 STQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNA 715 (767)
Q Consensus 636 ~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 715 (767)
.....|+..|+|||.+.+..++.++|||||||+++||++|+.||...... ..... ..... .+.+. .
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~------~~~~~-~~~~~-----~~~~~--~ 237 (285)
T cd06648 172 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL------QAMKR-IRDNL-----PPKLK--N 237 (285)
T ss_pred cccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH------HHHHH-HHhcC-----CCCCc--c
Confidence 22345889999999999888999999999999999999999998643221 11111 11111 01111 1
Q ss_pred ChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 716 PPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 716 ~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
+...+..+.+++.+||+.+|++||++.++++
T Consensus 238 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 238 LHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred cccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 2234567999999999999999999999985
No 291
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=6e-34 Score=300.66 Aligned_cols=248 Identities=24% Similarity=0.388 Sum_probs=199.8
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC-CCcchhHHHHHHHHHhccc---cceeeeEeeeeecCCceEEEE
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG-SQQGALEFQTEIGMLSQLR---YLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l~---Hpniv~l~g~~~~~~~~~lV~ 551 (767)
.|+..+.||+|+||.||+|....+++.+|+|.+... ......++.+|+.++++++ |||++++++++.++...++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 466677899999999999999878899999998654 3344567889999999997 999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
||+++++|.+++... .+++...+.++.|++.||.||| ..+++|+||+|+||++++++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06917 82 EYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS 155 (277)
T ss_pred ecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc
Confidence 999999999998543 6899999999999999999999 7789999999999999999999999999987643322
Q ss_pred CccccccccCCCcccChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccccc
Q 042216 632 KTHVSTQVKGSIGYLDPEYYRLQ-LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPF 710 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 710 (767)
.......|+..|+|||.+..+ .++.++|||||||++|||++|+.||......... . ..... ..+.
T Consensus 156 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~------~-~~~~~-----~~~~ 221 (277)
T cd06917 156 --SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAM------M-LIPKS-----KPPR 221 (277)
T ss_pred --cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhh------h-ccccC-----CCCC
Confidence 112334688899999998754 5689999999999999999999999644321110 0 00000 0111
Q ss_pred ccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 711 LKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 711 l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
+.. ...+.++.+++.+||+.||.+||++.|+++
T Consensus 222 ~~~---~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 222 LED---NGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred CCc---ccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 111 124567899999999999999999999986
No 292
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=7e-34 Score=306.34 Aligned_cols=196 Identities=24% Similarity=0.377 Sum_probs=159.4
Q ss_pred eeeeccCcEEEEEEEecC--CCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeec--CCceEEEEecCCC
Q 042216 481 LIIGRGGFGNVYKGFLNG--DSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCND--DGQMILVYDYMAR 556 (767)
Q Consensus 481 ~~LG~G~fG~Vy~g~~~~--~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~--~~~~~lV~ey~~~ 556 (767)
..||+|+||.||+|+..+ .+..+|+|.+.... ....+.+|++++++++||||+++++++.. +...++|+||+++
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH 84 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence 479999999999999754 34689999986432 23467899999999999999999998853 4578999999875
Q ss_pred CChhhhhccC-------CCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEE----CCCCcEEEeecCCcc
Q 042216 557 GTLRDHLYNN-------DNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILL----DEEWVAKVSDFGLCK 625 (767)
Q Consensus 557 gsL~~~L~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl----d~~~~~ki~DfGla~ 625 (767)
+|.+++... ....+++..+..++.|++.||.||| +.+|+||||||+|||+ ++++.+||+|||+++
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 787776421 1235889999999999999999999 7889999999999999 567799999999998
Q ss_pred cCCCCCCc-cccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 042216 626 FGPNFSKT-HVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRT 682 (767)
Q Consensus 626 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~ 682 (767)
........ .......+|..|+|||.+.+ ..++.++|||||||++|||++|++||...
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 64332111 11234568899999999876 45899999999999999999999999654
No 293
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=4.3e-34 Score=304.16 Aligned_cols=244 Identities=27% Similarity=0.376 Sum_probs=201.9
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
++|...+.||+|+||.||++.....++.+|+|.+.... ......+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36788889999999999999998888999999986432 233456889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
||+++++|.+++... ..+++..+..++.|++.||.||| +.+++|+||+|+|||+++++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~- 154 (290)
T cd05580 81 EYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR- 154 (290)
T ss_pred ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC-
Confidence 999999999999654 46899999999999999999999 788999999999999999999999999998764332
Q ss_pred CccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccc
Q 042216 632 KTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFL 711 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 711 (767)
.....+++.|+|||.+.+...+.++||||||++++||++|+.||...... ... .....+.
T Consensus 155 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~----~~~~~~~--------- 214 (290)
T cd05580 155 ----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI---QIY----EKILEGK--------- 214 (290)
T ss_pred ----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH---HHH----HHHhcCC---------
Confidence 23446889999999998888999999999999999999999998644321 111 1111111
Q ss_pred cCCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHH
Q 042216 712 KGNAPPVCLNQFVEVAMSCVNDDRIRRP-----SMSDVV 745 (767)
Q Consensus 712 ~~~~~~~~~~~l~~li~~Cl~~dp~~RP-----s~~evl 745 (767)
...+......+.+++.+||+.||.+|| +++|++
T Consensus 215 -~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 215 -VRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred -ccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 112334467789999999999999999 677776
No 294
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=5.5e-34 Score=303.90 Aligned_cols=251 Identities=25% Similarity=0.384 Sum_probs=204.3
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
.+|...+.||+|+||.||++....+++.+++|.+........+.+.+|+.++++++|||++++++++...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 57888889999999999999987777899999987555555667899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
++++|.+++.+. .+++.++..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||++....... .
T Consensus 99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~--~ 170 (293)
T cd06647 99 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--S 170 (293)
T ss_pred CCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccCcceecccccc--c
Confidence 999999998543 4789999999999999999999 7889999999999999999999999999986543221 1
Q ss_pred ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCC
Q 042216 635 VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGN 714 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 714 (767)
......++..|+|||.+....++.++|||||||++|||++|+.||........... ....+ .....
T Consensus 171 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~------~~~~~--------~~~~~ 236 (293)
T cd06647 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL------IATNG--------TPELQ 236 (293)
T ss_pred ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee------hhcCC--------CCCCC
Confidence 22334588899999999888899999999999999999999999965432211100 00000 00011
Q ss_pred CChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 715 APPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 715 ~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
.+......+.+++.+||+.+|++||++.+++..
T Consensus 237 ~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 237 NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 122345678899999999999999999999855
No 295
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.2e-33 Score=300.80 Aligned_cols=265 Identities=20% Similarity=0.239 Sum_probs=198.9
Q ss_pred HhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC-cchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ-QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
++++|...+.||+|+||.||+|....++..+|+|++..... .....+.+|+++++.++|+||+++.+++..++..++|+
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 35688899999999999999999987788999999865432 23346789999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
||+. ++|.+++.... ..+.+.++..++.|++.||.||| ..+|+|+||||+|||++.++.+||+|||+++......
T Consensus 83 e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 157 (291)
T cd07870 83 EYMH-TDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS 157 (291)
T ss_pred eccc-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEeccccccccCCCC
Confidence 9996 68877775433 35788899999999999999999 7789999999999999999999999999987532211
Q ss_pred CccccccccCCCcccChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcC---------
Q 042216 632 KTHVSTQVKGSIGYLDPEYYRLQ-LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNG--------- 701 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~--------- 701 (767)
.......++..|+|||.+.+. .++.++|||||||++|||++|+.||........ .+... +......
T Consensus 158 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~ 233 (291)
T cd07870 158 --QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFE-QLEKI-WTVLGVPTEDTWPGVS 233 (291)
T ss_pred --CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHH-HHHHH-HHHcCCCChhhhhhhh
Confidence 112234468899999998754 578899999999999999999999965433211 11110 0000000
Q ss_pred CccccccccccCCC---------ChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 702 KIGDIIDPFLKGNA---------PPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 702 ~~~~~~d~~l~~~~---------~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.............. .......+.+++.+|++.||.+|||+.|++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 234 KLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred hcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 00000000000000 0012456789999999999999999999874
No 296
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.2e-33 Score=292.61 Aligned_cols=250 Identities=26% Similarity=0.417 Sum_probs=205.4
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCC
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMA 555 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~ 555 (767)
+|...+.||+|++|.||++....+++.+++|++.........++.+|++++++++|+|++++++++...+..++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 46677899999999999999987778999999976655566789999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccc
Q 042216 556 RGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHV 635 (767)
Q Consensus 556 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~ 635 (767)
+++|.+++.... ..+++..+..++.+++.+|.+|| ..+++|+||+|+||++++++.++|+|||++........
T Consensus 81 ~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--- 153 (253)
T cd05122 81 GGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--- 153 (253)
T ss_pred CCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeecccccccccccc---
Confidence 999999986543 46899999999999999999999 78899999999999999999999999999876443221
Q ss_pred cccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCC
Q 042216 636 STQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNA 715 (767)
Q Consensus 636 ~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 715 (767)
.....++..|+|||.+....++.++||||||+++++|++|+.|+......... . .. ......... .
T Consensus 154 ~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~---~---~~-~~~~~~~~~-------~ 219 (253)
T cd05122 154 RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKAL---F---KI-ATNGPPGLR-------N 219 (253)
T ss_pred ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHH---H---HH-HhcCCCCcC-------c
Confidence 23456888999999999888999999999999999999999998644321111 0 00 001111110 1
Q ss_pred ChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 716 PPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 716 ~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
+...+..+.+++.+||+.||++|||+.|+++
T Consensus 220 ~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 220 PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred ccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1123567899999999999999999999975
No 297
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=3.1e-34 Score=304.75 Aligned_cols=255 Identities=26% Similarity=0.377 Sum_probs=197.9
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC-CcchhHHHHHHHHHhccc-cceeeeEeeeeecCCceEEEEec
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS-QQGALEFQTEIGMLSQLR-YLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~-Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
+|...+.||+|+||.||++.....++.+|+|++.... ......+.+|+.++.++. |+||+++++++..++..+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 4555668999999999999998888999999987543 234557889999999996 99999999999999999999999
Q ss_pred CCCCChhhh---hccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCC
Q 042216 554 MARGTLRDH---LYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNF 630 (767)
Q Consensus 554 ~~~gsL~~~---L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~ 630 (767)
+.. +|.++ +.......+++..+..++.+++.||+|||+ ..+++||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 874 55443 333334569999999999999999999994 358999999999999999999999999998753221
Q ss_pred CCccccccccCCCcccChhhhccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccc
Q 042216 631 SKTHVSTQVKGSIGYLDPEYYRLQ---LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDII 707 (767)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~~---~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 707 (767)
.......|+..|+|||.+... .++.++|||||||++|||++|+.||..... .......... + .
T Consensus 162 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~~~~~~~~-~-----~ 227 (288)
T cd06616 162 ---IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS-----VFDQLTQVVK-G-----D 227 (288)
T ss_pred ---CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch-----HHHHHhhhcC-C-----C
Confidence 112233578899999998866 689999999999999999999999854321 1111111111 1 1
Q ss_pred cccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 708 DPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 708 d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
.+.+....+..++.++.+++.+||+.+|.+|||+.+|++.
T Consensus 228 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 228 PPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1122222233467789999999999999999999999853
No 298
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-36 Score=288.85 Aligned_cols=251 Identities=21% Similarity=0.292 Sum_probs=203.7
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
+++|+..+.||+|.|+.|++..+..+++.+|+|++... +..+.+++.+|+++.+.|+||||++|.....+.+..|||+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 34566667899999999999999888899999987543 4457788999999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEEC---CCCcEEEeecCCcccCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLD---EEWVAKVSDFGLCKFGP 628 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld---~~~~~ki~DfGla~~~~ 628 (767)
|+|.+|+|..-+-.. ...++...-..+.||+++|.|+| .++|||||+||.|+|+- ..--+||+|||++....
T Consensus 90 e~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH---~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCH---SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN 164 (355)
T ss_pred ecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence 999999998766332 34677788889999999999999 88999999999999994 34468999999998654
Q ss_pred CCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccc
Q 042216 629 NFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIID 708 (767)
Q Consensus 629 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 708 (767)
.........||++|||||+++..+++..+|||+.||+||-|+.|.+||.+.+.. .+ .+.+..+..
T Consensus 165 ---~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~---rl----ye~I~~g~y----- 229 (355)
T KOG0033|consen 165 ---DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---RL----YEQIKAGAY----- 229 (355)
T ss_pred ---CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH---HH----HHHHhcccc-----
Confidence 233345577999999999999999999999999999999999999999764321 11 111222210
Q ss_pred ccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHH
Q 042216 709 PFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVV 745 (767)
Q Consensus 709 ~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl 745 (767)
.+.+..-+...++..+|+.+||..||.+|.|+.|.+
T Consensus 230 -d~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL 265 (355)
T KOG0033|consen 230 -DYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEAL 265 (355)
T ss_pred -CCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHh
Confidence 011222234567788999999999999999999887
No 299
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.3e-35 Score=318.98 Aligned_cols=242 Identities=24% Similarity=0.390 Sum_probs=193.5
Q ss_pred eeeccCcEEEEEEEecCCCceEEEEEeCC----CCCcchhHHHHHHHHHhccccceeeeEeeeeecCC--ceEEEEecCC
Q 042216 482 IIGRGGFGNVYKGFLNGDSTPVAIKRLNP----GSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDG--QMILVYDYMA 555 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~----~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~--~~~lV~ey~~ 555 (767)
+||+|+|-+||||....++..||--.++. .+....+.|..|+.+|+.|+||||++++.++.+.. ...+|+|.|.
T Consensus 47 vLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~T 126 (632)
T KOG0584|consen 47 VLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFT 126 (632)
T ss_pred hcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeeccc
Confidence 79999999999999988888888543321 23445578999999999999999999999987655 4889999999
Q ss_pred CCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEEC-CCCcEEEeecCCcccCCCCCCcc
Q 042216 556 RGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLD-EEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 556 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld-~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
.|+|..|+++.. .++.+.+.+||.||++||.|||+. .++|||||||.+||||+ ..|.|||+|+|||.+... .+
T Consensus 127 SGtLr~Y~kk~~--~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~---s~ 200 (632)
T KOG0584|consen 127 SGTLREYRKKHR--RVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK---SH 200 (632)
T ss_pred CCcHHHHHHHhc--cCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhc---cc
Confidence 999999997765 488899999999999999999964 58999999999999997 568999999999987532 12
Q ss_pred ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCC
Q 042216 635 VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGN 714 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 714 (767)
...+.|||.|||||.+. ..|++..||||||++++||+|+..||.. ..+.+.... .+..|.....+.+
T Consensus 201 -aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsE-----C~n~AQIYK-KV~SGiKP~sl~k----- 267 (632)
T KOG0584|consen 201 -AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSE-----CTNPAQIYK-KVTSGIKPAALSK----- 267 (632)
T ss_pred -cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhh-----hCCHHHHHH-HHHcCCCHHHhhc-----
Confidence 23378999999999998 8899999999999999999999999943 222222222 1222221111110
Q ss_pred CChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 715 APPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 715 ~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
-.-.++.++|.+|+.. ..+|||+.|+|.
T Consensus 268 ---V~dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 268 ---VKDPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred ---cCCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 0124678999999999 999999999984
No 300
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=7.9e-34 Score=295.25 Aligned_cols=252 Identities=24% Similarity=0.384 Sum_probs=206.8
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC--cchhHHHHHHHHHhccccceeeeEeeeeecC--CceEEEE
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ--QGALEFQTEIGMLSQLRYLHLVSLIGYCNDD--GQMILVY 551 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~--~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~--~~~~lV~ 551 (767)
+|...+.||+|++|.||+|....+++.+++|++..... ...+.+.+|++++++++|+||+++++.+... ...++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 36677899999999999999987788999999875542 4566789999999999999999999999988 8999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
||+++++|.+++.+.. .+++.++..++.+++.||.||| +.+++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 81 EYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred EecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccEEeccccc
Confidence 9999999999996543 7999999999999999999999 6889999999999999999999999999987654322
Q ss_pred CccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccc
Q 042216 632 KTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFL 711 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 711 (767)
.........++..|+|||.+.....+.++||||||+++++|++|+.||...... ....... .....
T Consensus 156 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~---------~~~~~ 221 (260)
T cd06606 156 TGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNP-----MAALYKI---------GSSGE 221 (260)
T ss_pred ccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch-----HHHHHhc---------cccCC
Confidence 111133456888999999999888999999999999999999999999655411 1111111 01111
Q ss_pred cCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 712 KGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 712 ~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
....+...+..+.+++.+|++.+|.+||++.|++.
T Consensus 222 ~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 222 PPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred CcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 12234445678999999999999999999999975
No 301
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.8e-34 Score=315.17 Aligned_cols=203 Identities=27% Similarity=0.349 Sum_probs=175.9
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccc-c-----ceeeeEeeeeecCCceEE
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLR-Y-----LHLVSLIGYCNDDGQMIL 549 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~-H-----pniv~l~g~~~~~~~~~l 549 (767)
+|.++++||+|+||.|-++...++++.||||+++.. ..-..+-..|+.+|..|+ | -|+|++++++...+++||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 788899999999999999999999999999999754 333455678999999997 4 299999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECC--CCcEEEeecCCcccC
Q 042216 550 VYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDE--EWVAKVSDFGLCKFG 627 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~--~~~~ki~DfGla~~~ 627 (767)
|+|.++. +|.++|+.+.-..++...+..|+.||+.||..|| ..+|||+||||+||||.+ ...+||+|||.+...
T Consensus 266 VfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 266 VFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLH---ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 9999976 9999999888888999999999999999999999 788999999999999964 348999999999864
Q ss_pred CCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccch
Q 042216 628 PNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQV 688 (767)
Q Consensus 628 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~ 688 (767)
...-. ...-+..|.|||++.+.+|+.+.||||||||+.||++|.+-|.+..+.++.
T Consensus 342 ~q~vy-----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl 397 (586)
T KOG0667|consen 342 SQRVY-----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQL 397 (586)
T ss_pred CCcce-----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHH
Confidence 33221 223456799999999999999999999999999999998888766654443
No 302
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=5e-34 Score=302.22 Aligned_cols=262 Identities=20% Similarity=0.240 Sum_probs=199.4
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC--CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS--QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
|+..+.||+|++|.||+|....+++.||+|++.... ......+.+|++++++++|||++++++++.+.+..+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 456778999999999999998788999999986543 223356889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
+ ++|.+++.......+++..++.++.|+++||.||| +++++|+||+|+||+++.++.++|+|||+++...... .
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~--~ 154 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV--R 154 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc--c
Confidence 5 69999987655456899999999999999999999 6789999999999999999999999999987542211 1
Q ss_pred ccccccCCCcccChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcC--------Cccc
Q 042216 635 VSTQVKGSIGYLDPEYYRLQ-LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNG--------KIGD 705 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~--------~~~~ 705 (767)
......++..|+|||++.+. .++.++||||||+++|||++|+.||....... .+........... .+.+
T Consensus 155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID--QLFRIFRTLGTPDEDVWPGVTSLPD 232 (283)
T ss_pred ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCChHHhhhhhhchh
Confidence 11223467899999987654 57899999999999999999999996543211 1111111000000 0000
Q ss_pred cccc------cccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 706 IIDP------FLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 706 ~~d~------~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.... .......+..+.++.+++.+||+.+|.+|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 233 YKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000 0000112234567889999999999999999999974
No 303
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=7.8e-34 Score=304.78 Aligned_cols=246 Identities=28% Similarity=0.384 Sum_probs=198.1
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC---cchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ---QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
+.|+..+.||+|+||.||+|+...+++.||+|++..... ...+++.+|+++++.++|||++++.++|.+.+..++|+
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 457778899999999999999987789999999864322 23456889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
||++ |+|.+++.... ..+++..+..++.|++.||.||| +.+++|+||+|+||++++++.+||+|||++......
T Consensus 95 e~~~-g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~- 168 (307)
T cd06607 95 EYCL-GSASDILEVHK-KPLQEVEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA- 168 (307)
T ss_pred HhhC-CCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEECCCCCEEEeecCcceecCCC-
Confidence 9997 58877775433 35899999999999999999999 788999999999999999999999999998754321
Q ss_pred CccccccccCCCcccChhhhc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccc
Q 042216 632 KTHVSTQVKGSIGYLDPEYYR---LQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIID 708 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 708 (767)
....++..|+|||.+. ...++.++||||||+++|||++|+.||........ .... .....
T Consensus 169 -----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~------~~~~-~~~~~----- 231 (307)
T cd06607 169 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------LYHI-AQNDS----- 231 (307)
T ss_pred -----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH------HHHH-hcCCC-----
Confidence 2345788999999874 45688999999999999999999999865432111 0110 00000
Q ss_pred ccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 709 PFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 709 ~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
+ ...+..++..+.+++.+||+.+|++||++.+|+.
T Consensus 232 ~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 232 P---TLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred C---CCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0 0112235677999999999999999999999986
No 304
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=8e-34 Score=302.43 Aligned_cols=265 Identities=20% Similarity=0.280 Sum_probs=200.3
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCc--chhHHHHHHHHHhccccceeeeEeeeeecC--CceEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQ--GALEFQTEIGMLSQLRYLHLVSLIGYCNDD--GQMILV 550 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~--~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~--~~~~lV 550 (767)
++|+..+.||+|+||.||+|+...+++.+++|.++..... ....+.+|+.++.+++||||+++++++... +..++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 4678888999999999999999888889999998754322 233567899999999999999999998777 899999
Q ss_pred EecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCC
Q 042216 551 YDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNF 630 (767)
Q Consensus 551 ~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~ 630 (767)
+||+++ +|.+++.... ..+++.++..++.|++.||.||| +.+++|+||||+|||++.++.+||+|||+++.....
T Consensus 85 ~e~~~~-~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 159 (293)
T cd07843 85 MEYVEH-DLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSP 159 (293)
T ss_pred ehhcCc-CHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence 999985 9999886543 36899999999999999999999 778999999999999999999999999998754332
Q ss_pred CCccccccccCCCcccChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHH-HH-------HHHHh---
Q 042216 631 SKTHVSTQVKGSIGYLDPEYYRLQ-LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLA-VW-------ATECY--- 698 (767)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~-~~-------~~~~~--- 698 (767)
. .......++..|+|||.+.+. .++.++|+||||+++|||++|++||............ .. .+..+
T Consensus 160 ~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (293)
T cd07843 160 L--KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSEL 237 (293)
T ss_pred c--cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhcc
Confidence 1 111233467889999998754 4689999999999999999999999654322111000 00 00000
Q ss_pred ---hcCCccccccccccCCCChh-hHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 699 ---RNGKIGDIIDPFLKGNAPPV-CLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 699 ---~~~~~~~~~d~~l~~~~~~~-~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
............+....+.. ....+.+++.+||+.+|++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 238 PGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred chhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 00001111111122222222 4667889999999999999999999975
No 305
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-36 Score=296.96 Aligned_cols=248 Identities=23% Similarity=0.360 Sum_probs=208.2
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCC
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMAR 556 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~ 556 (767)
|+.+.+||+|+||.||++.++..++.+|||++.. ....+++..|+.++++.+.|++|+.+|.+.....+|+|||||.-
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 6677789999999999999999999999998854 34677899999999999999999999999999999999999999
Q ss_pred CChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcccc
Q 042216 557 GTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVS 636 (767)
Q Consensus 557 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~ 636 (767)
|++.+.++.. +++|++.++..++...++||+||| ...-||||||+.|||++-+|.+||+|||.+..... .....
T Consensus 113 GSiSDI~R~R-~K~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD--TMAKR 186 (502)
T KOG0574|consen 113 GSISDIMRAR-RKPLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTD--TMAKR 186 (502)
T ss_pred CcHHHHHHHh-cCCccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccchhhh--hHHhh
Confidence 9999998654 568999999999999999999999 56679999999999999999999999999864322 12233
Q ss_pred ccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCC
Q 042216 637 TQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAP 716 (767)
Q Consensus 637 ~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 716 (767)
..+.||+-|||||++..-.|..++||||+|++..||..|++||...-...... .+..-.-|.+ ..|
T Consensus 187 NTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF------------MIPT~PPPTF--~KP 252 (502)
T KOG0574|consen 187 NTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF------------MIPTKPPPTF--KKP 252 (502)
T ss_pred CccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeE------------eccCCCCCCC--CCh
Confidence 45779999999999999999999999999999999999999996543321100 0000011111 235
Q ss_pred hhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 717 PVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 717 ~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
...+.++-+++++||...|++|-|+.++++
T Consensus 253 E~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 253 EEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred HhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 677889999999999999999999998874
No 306
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=7.5e-34 Score=301.00 Aligned_cols=261 Identities=22% Similarity=0.288 Sum_probs=199.4
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC--CcchhHHHHHHHHHhccccceeeeEeeeeecC--CceEEEEe
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS--QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDD--GQMILVYD 552 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~--~~~~lV~e 552 (767)
|+..+.||+|++|.||+|.....++.+|+|++.... ......+.+|++++++++|+|++++++++... +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 456778999999999999998878899999997653 33345688999999999999999999999887 89999999
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK 632 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~ 632 (767)
|+++ +|.+++.... ..+++.+++.++.|+++||.||| ..+++|+||||+||++++++.+||+|||++........
T Consensus 81 ~~~~-~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 81 YMDH-DLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS 155 (287)
T ss_pred cccc-cHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence 9985 8998886543 46899999999999999999999 67899999999999999999999999999875433221
Q ss_pred ccccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhc---CCcc----
Q 042216 633 THVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRN---GKIG---- 704 (767)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~---~~~~---- 704 (767)
.......++..|+|||.+.+ ..++.++||||||+++|||++|+.||........... ....... ....
T Consensus 156 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07840 156 -ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEK---IFELCGSPTDENWPGVSK 231 (287)
T ss_pred -ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH---HHHHhCCCchhhcccccc
Confidence 11233456788999998764 4678999999999999999999999965443211111 1110000 0000
Q ss_pred ----------ccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 705 ----------DIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 705 ----------~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
......+.......++.++.+++.+||+.+|.+||+++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 232 LPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred chhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000000111111113677899999999999999999999975
No 307
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1e-33 Score=301.79 Aligned_cols=263 Identities=21% Similarity=0.273 Sum_probs=196.7
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC--cchhHHHHHHHHHhccc-cceeeeEeeeeecCCc-----
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ--QGALEFQTEIGMLSQLR-YLHLVSLIGYCNDDGQ----- 546 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~--~~~~~f~~Ei~~l~~l~-Hpniv~l~g~~~~~~~----- 546 (767)
++|+..+.||+|+||.||+|....+++.||+|.+..... .....+.+|+.+++.++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 367888899999999999999988889999998765422 23456888999999995 6999999999876655
Q ss_pred eEEEEecCCCCChhhhhccCC---CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECC-CCcEEEeecC
Q 042216 547 MILVYDYMARGTLRDHLYNND---NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDE-EWVAKVSDFG 622 (767)
Q Consensus 547 ~~lV~ey~~~gsL~~~L~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~-~~~~ki~DfG 622 (767)
.++||||+++ +|.+++.... ...+++..++.++.|++.||.||| +++|+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEEEeecc
Confidence 8999999986 8988885432 346899999999999999999999 788999999999999998 8999999999
Q ss_pred CcccCCCCCCccccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcC
Q 042216 623 LCKFGPNFSKTHVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNG 701 (767)
Q Consensus 623 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~ 701 (767)
+++...... .......+++.|+|||++.+ ..++.++||||||+++|||++|..||....+.+. +..... .....
T Consensus 157 ~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~--~~~~~~-~~~~~ 231 (295)
T cd07837 157 LGRAFSIPV--KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQ--LLHIFK-LLGTP 231 (295)
T ss_pred cceecCCCc--cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHH--HHHHHH-HhCCC
Confidence 987542211 11122346788999998865 4679999999999999999999999965433211 111111 00000
Q ss_pred C---cccccc-------cccc----CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 702 K---IGDIID-------PFLK----GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 702 ~---~~~~~d-------~~l~----~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
. .....+ +... ....+....++.+++.+||+.||.+||++.|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 232 TEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred ChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0 000000 0000 0001234567899999999999999999999874
No 308
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=3.9e-34 Score=298.83 Aligned_cols=248 Identities=27% Similarity=0.313 Sum_probs=204.3
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEe
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~e 552 (767)
+|+..+.||.|+||.||++.....++.+|+|.+.... ....+.+.+|++++++++||||+++++++.++...++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4778889999999999999998778899999986542 2345678999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK 632 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~ 632 (767)
|+.+++|.+++... .++++.++..++.|+++||.||| .++++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT- 154 (258)
T ss_pred CCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-
Confidence 99999999999654 46899999999999999999999 7789999999999999999999999999987543321
Q ss_pred ccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccccccc
Q 042216 633 THVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLK 712 (767)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 712 (767)
......++..|+|||.+....++.++|+||||+++|+|++|+.||....... ..+....... ..
T Consensus 155 --~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~~~~~~~~----------~~ 218 (258)
T cd05578 155 --LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI----RDQIRAKQET----------AD 218 (258)
T ss_pred --cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH----HHHHHHHhcc----------cc
Confidence 2233557889999999998889999999999999999999999996554321 1111111110 11
Q ss_pred CCCChhhHHHHHHHHHHccccCCCCCCCH--HHHH
Q 042216 713 GNAPPVCLNQFVEVAMSCVNDDRIRRPSM--SDVV 745 (767)
Q Consensus 713 ~~~~~~~~~~l~~li~~Cl~~dp~~RPs~--~evl 745 (767)
...+...+..+.+++.+||+.||.+||++ +|++
T Consensus 219 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 219 VLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred ccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 22344456789999999999999999999 5554
No 309
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-35 Score=312.26 Aligned_cols=245 Identities=28% Similarity=0.379 Sum_probs=204.4
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCc---chhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEe
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQ---GALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~---~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~e 552 (767)
-|+.++.||.|+||-||-+....+...||||++.-..++ ..+++..|+..|.+++|||.+..-||+..+...|||||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 467777899999999999999888899999999765443 45678999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK 632 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~ 632 (767)
||-| |-.|.|.-+ .++|-+..+..|+.+++.||+||| +.+.||||||+.|||+.+.|.|||+|||.+.+..
T Consensus 107 YClG-SAsDlleVh-kKplqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~---- 177 (948)
T KOG0577|consen 107 YCLG-SASDLLEVH-KKPLQEVEIAAITHGALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMA---- 177 (948)
T ss_pred HHhc-cHHHHHHHH-hccchHHHHHHHHHHHHHHHHHHH---HhhHHhhhccccceEecCCCeeeeccccchhhcC----
Confidence 9954 777777443 357999999999999999999999 7889999999999999999999999999987543
Q ss_pred ccccccccCCCcccChhhhc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccc
Q 042216 633 THVSTQVKGSIGYLDPEYYR---LQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDP 709 (767)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 709 (767)
.....+||+.|||||++. .+.|+-|.||||+|++..||.-.++|+..+....-. -..+ .. -.|
T Consensus 178 --PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSAL--YHIA-----QN-----esP 243 (948)
T KOG0577|consen 178 --PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL--YHIA-----QN-----ESP 243 (948)
T ss_pred --chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHH--HHHH-----hc-----CCC
Confidence 234578999999999875 578999999999999999999999998766543211 1111 11 112
Q ss_pred cccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 710 FLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 710 ~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.|. ..+.+..+++++..||+.-|.+|||.+++++
T Consensus 244 tLq---s~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 244 TLQ---SNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred CCC---CchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 222 3467888999999999999999999998874
No 310
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.2e-33 Score=299.89 Aligned_cols=254 Identities=26% Similarity=0.387 Sum_probs=206.2
Q ss_pred HhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEe
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~e 552 (767)
.++.|+..+.||+|++|.||+|.+...+..+++|++..... ....+.+|+++++.++|+|++++++++...+..++++|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 45567777889999999999999987778999999976544 45678999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK 632 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~ 632 (767)
|+++++|.+++.... ..+++..+..++.+++.||.||| +.+++|+||+|+||+++.++.++|+|||++.......
T Consensus 96 ~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~- 170 (286)
T cd06614 96 YMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK- 170 (286)
T ss_pred ccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEECccchhhhhccch-
Confidence 999999999997654 36999999999999999999999 7889999999999999999999999999976433211
Q ss_pred ccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccccccc
Q 042216 633 THVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLK 712 (767)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 712 (767)
.......++..|+|||.+.+..++.++|||||||++|||++|+.||........ ... . ........
T Consensus 171 -~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~--~~~----~-~~~~~~~~------ 236 (286)
T cd06614 171 -SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA--LFL----I-TTKGIPPL------ 236 (286)
T ss_pred -hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHH--HHH----H-HhcCCCCC------
Confidence 112234578899999999888899999999999999999999999864332111 111 0 11111110
Q ss_pred CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 713 GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 713 ~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
..+..++..+.+++.+||+.+|.+||++.+|++.
T Consensus 237 -~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 237 -KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred -cchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 1122255678999999999999999999999863
No 311
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.7e-33 Score=303.02 Aligned_cols=267 Identities=22% Similarity=0.277 Sum_probs=198.3
Q ss_pred ccccceeeeccCcEEEEEEEecC--CCceEEEEEeCCCC---CcchhHHHHHHHHHhccccceeeeEeeeeecC--CceE
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNG--DSTPVAIKRLNPGS---QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDD--GQMI 548 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~--~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~--~~~~ 548 (767)
.|+..+.||+|+||.||+|+... .++.||+|.+.... ......+.+|+.++.+++||||+++++++.+. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 36777899999999999999987 67899999997632 33345678899999999999999999999888 7899
Q ss_pred EEEecCCCCChhhhhccC---CCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECC----CCcEEEeec
Q 042216 549 LVYDYMARGTLRDHLYNN---DNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDE----EWVAKVSDF 621 (767)
Q Consensus 549 lV~ey~~~gsL~~~L~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~----~~~~ki~Df 621 (767)
+||||+++ +|.+++... ....+++..+..++.|++.||.||| +.+|+||||||+|||++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 777766432 2236899999999999999999999 788999999999999999 999999999
Q ss_pred CCcccCCCCCC-ccccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccc-------hhHHH
Q 042216 622 GLCKFGPNFSK-THVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQ-------VNLAV 692 (767)
Q Consensus 622 Gla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~-------~~l~~ 692 (767)
|+++....... ........++..|+|||.+.+ ..++.++|||||||+++||++|++||........ ..+..
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99886433222 111223457889999998876 4588999999999999999999999965543220 01111
Q ss_pred HHHHHh-----------hcCCccccccccccCCCC---------h--hhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 693 WATECY-----------RNGKIGDIIDPFLKGNAP---------P--VCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 693 ~~~~~~-----------~~~~~~~~~d~~l~~~~~---------~--~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.....- .........+.......+ . ....++.+++.+||+.||++|||+.|+++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 111000 000000000000000111 0 33457899999999999999999999975
No 312
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.4e-33 Score=298.52 Aligned_cols=243 Identities=23% Similarity=0.291 Sum_probs=190.2
Q ss_pred eeeccCcEEEEEEEecCCCceEEEEEeCCCCC---cchhHHHHHHHHHh---ccccceeeeEeeeeecCCceEEEEecCC
Q 042216 482 IIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ---QGALEFQTEIGMLS---QLRYLHLVSLIGYCNDDGQMILVYDYMA 555 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~---~l~Hpniv~l~g~~~~~~~~~lV~ey~~ 555 (767)
+||+|+||.||++....+++.+|+|.+..... .....+.+|..++. ..+|||++.+.+++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 48999999999999988889999998865421 22223445544443 3479999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccc
Q 042216 556 RGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHV 635 (767)
Q Consensus 556 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~ 635 (767)
+|+|.+++... ..+++..+..++.|++.||.||| +.+|+|+||||+|||+++++.++|+|||++...... .
T Consensus 81 ~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~----~ 151 (279)
T cd05633 81 GGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK----K 151 (279)
T ss_pred CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc----C
Confidence 99999998643 45999999999999999999999 788999999999999999999999999998643221 1
Q ss_pred cccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCC
Q 042216 636 STQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGN 714 (767)
Q Consensus 636 ~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 714 (767)
.....|+..|+|||.+.. ..++.++|||||||+++||++|+.||..........+.. ... .....
T Consensus 152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~----~~~----------~~~~~ 217 (279)
T cd05633 152 PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR----MTL----------TVNVE 217 (279)
T ss_pred ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHH----Hhh----------cCCcC
Confidence 123468999999999864 568999999999999999999999996543322111111 000 01112
Q ss_pred CChhhHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 042216 715 APPVCLNQFVEVAMSCVNDDRIRRP-----SMSDVVWG 747 (767)
Q Consensus 715 ~~~~~~~~l~~li~~Cl~~dp~~RP-----s~~evl~~ 747 (767)
.+...+.++.+++.+||+.||.+|| +++++++.
T Consensus 218 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 218 LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 3445667889999999999999999 59988864
No 313
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.5e-33 Score=295.01 Aligned_cols=243 Identities=21% Similarity=0.241 Sum_probs=198.0
Q ss_pred eeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCCh
Q 042216 483 IGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGTL 559 (767)
Q Consensus 483 LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gsL 559 (767)
||.|++|.||+++....++.+|+|++.... ....+.+.+|+++++.++||||+++++.+.++...++++||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999998778899999986542 23446789999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccccc
Q 042216 560 RDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQV 639 (767)
Q Consensus 560 ~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~ 639 (767)
.+++.+. ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||+++...... .....
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~~~ 152 (262)
T cd05572 81 WTILRDR--GLFDEYTARFYIACVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWTF 152 (262)
T ss_pred HHHHhhc--CCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---ccccc
Confidence 9999654 35899999999999999999999 7889999999999999999999999999987653321 12234
Q ss_pred cCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhh
Q 042216 640 KGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVC 719 (767)
Q Consensus 640 ~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 719 (767)
.++..|+|||.+....++.++|+||||+++|||++|+.||....... ........ +.......+...
T Consensus 153 ~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~---------~~~~~~~~~~~~ 219 (262)
T cd05572 153 CGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP----MEIYNDIL---------KGNGKLEFPNYI 219 (262)
T ss_pred cCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH----HHHHHHHh---------ccCCCCCCCccc
Confidence 57889999999988889999999999999999999999996554311 11111111 001122234445
Q ss_pred HHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 042216 720 LNQFVEVAMSCVNDDRIRRPS-----MSDVVW 746 (767)
Q Consensus 720 ~~~l~~li~~Cl~~dp~~RPs-----~~evl~ 746 (767)
+.++.+++.+||+.+|.+||+ +.|+++
T Consensus 220 ~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 220 DKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred CHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 678999999999999999999 566554
No 314
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=2.4e-33 Score=302.51 Aligned_cols=246 Identities=26% Similarity=0.378 Sum_probs=197.8
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC---cchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ---QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
|...+.||+|+||.||+++...++..+|+|++..... ....++.+|++++++++|||++++++++.++...++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 6667789999999999999988888999999864422 2345688999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+. |+|.+.+... ..+++|.++..++.+++.||.||| +.+++|+||+|+||+++.++.+||+|||++.....
T Consensus 107 ~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~---- 177 (317)
T cd06635 107 CL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP---- 177 (317)
T ss_pred CC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEecCCCccccCC----
Confidence 97 5888877543 346899999999999999999999 78899999999999999999999999999875322
Q ss_pred cccccccCCCcccChhhhc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccccc
Q 042216 634 HVSTQVKGSIGYLDPEYYR---LQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPF 710 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~---~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 710 (767)
.....++..|+|||++. .+.++.++|||||||++|||++|+.||........ +..+. ..+.
T Consensus 178 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~--~~~~~----~~~~-------- 241 (317)
T cd06635 178 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--LYHIA----QNES-------- 241 (317)
T ss_pred --cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH--HHHHH----hccC--------
Confidence 12345788999999974 45789999999999999999999999865432111 11111 1100
Q ss_pred ccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 042216 711 LKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGL 748 (767)
Q Consensus 711 l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L 748 (767)
........+..+.+++.+||+.+|.+||++.+|++.+
T Consensus 242 -~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 242 -PTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred -CCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 0111223556789999999999999999999999754
No 315
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.7e-33 Score=298.26 Aligned_cols=264 Identities=19% Similarity=0.262 Sum_probs=200.3
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCc-chhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQ-GALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~-~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
+|+..+.||+|++|.||+|+...+++.||||++...... ....+.+|++++++++|+|++++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 477888999999999999999888899999998765332 3456788999999999999999999999999999999999
Q ss_pred CCCChhhhhccCC-CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 555 ARGTLRDHLYNND-NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 555 ~~gsL~~~L~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
++ +|.+++.... ...+++.++..++.|++.||.||| +.+++|+||||+||++++++.++|+|||+++......
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~-- 154 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV-- 154 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc--
Confidence 85 8988886543 346899999999999999999999 7789999999999999999999999999987532211
Q ss_pred cccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhH-HHHH-------HHHhhc-CCc
Q 042216 634 HVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNL-AVWA-------TECYRN-GKI 703 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l-~~~~-------~~~~~~-~~~ 703 (767)
.......++..|++||.+.+ ..++.++|||||||++|||++|+.||......+.... .... .+.+.. ...
T Consensus 155 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07836 155 NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEY 234 (284)
T ss_pred cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchh
Confidence 11223456889999998865 4578999999999999999999999965443221110 0000 000000 000
Q ss_pred c----ccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 704 G----DIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 704 ~----~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
. ...+... ....+..+..+.+++.+|++.||.+||++.|+++
T Consensus 235 ~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 235 KPTFPRYPPQDL-QQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred cccccCCChHHH-HHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0 0000000 0111234567889999999999999999999974
No 316
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.6e-33 Score=301.25 Aligned_cols=265 Identities=23% Similarity=0.299 Sum_probs=199.9
Q ss_pred HHhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC--CcchhHHHHHHHHHhccccceeeeEeeeeecCC----
Q 042216 472 EATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS--QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDG---- 545 (767)
Q Consensus 472 ~~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~---- 545 (767)
...++|+..+.||+|+||.||+|..+.+++.||+|+++... ......+.+|++++++++|||++++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 35678899999999999999999998888899999987543 223346788999999999999999999987654
Q ss_pred ------ceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEe
Q 042216 546 ------QMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVS 619 (767)
Q Consensus 546 ------~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~ 619 (767)
..++|+||+++ +|.+.+... ...+++.++..++.|++.||+||| ..+|+|+||||+||++++++.+||+
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~kl~ 158 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQIKLA 158 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCcEEeC
Confidence 78999999986 777777544 346899999999999999999999 7789999999999999999999999
Q ss_pred ecCCcccCCCCCCccccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHh
Q 042216 620 DFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECY 698 (767)
Q Consensus 620 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~ 698 (767)
|||++........ .......++..|+|||.+.+ ..++.++|||||||+++||++|++||...... ..+.. +....
T Consensus 159 dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~--~~~~~-~~~~~ 234 (302)
T cd07864 159 DFGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQEL--AQLEL-ISRLC 234 (302)
T ss_pred cccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH--HHHHH-HHHHh
Confidence 9999876433221 11122345778999998864 45789999999999999999999999643321 11111 11111
Q ss_pred hcCC---ccccc--------cc------cccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 699 RNGK---IGDII--------DP------FLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 699 ~~~~---~~~~~--------d~------~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.... ..++. +. .++. .....+..+.+++.+||+.+|.+||++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 235 GSPCPAVWPDVIKLPYFNTMKPKKQYRRRLRE-EFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred CCCChhhcccccccccccccccccccccchhh-hcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0000 00000 00 0000 01124567899999999999999999999875
No 317
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.6e-33 Score=300.31 Aligned_cols=262 Identities=19% Similarity=0.258 Sum_probs=198.8
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC--cchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEe
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ--QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~--~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~e 552 (767)
++|+..+.||+|++|.||+|....+++.||+|++..... .....+.+|++++++++|+|++++++++...+..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 468888899999999999999988888999999864422 234568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECC-CCcEEEeecCCcccCCCCC
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDE-EWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~-~~~~ki~DfGla~~~~~~~ 631 (767)
|++ ++|.+++.......+++..+..++.|++.||+||| +++++|+||+|+||+++. ++.+||+|||+++.....
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~- 156 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP- 156 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEcccccccccCCC-
Confidence 996 58888886554445688899999999999999999 778999999999999985 567999999998754221
Q ss_pred CccccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccc---
Q 042216 632 KTHVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDII--- 707 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--- 707 (767)
........++..|+|||++.+ ..++.++|||||||++|||++|++||......+.. .. ........ ..+..
T Consensus 157 -~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~--~~-~~~~~~~~-~~~~~~~~ 231 (294)
T PLN00009 157 -VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDEL--FK-IFRILGTP-NEETWPGV 231 (294)
T ss_pred -ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH--HH-HHHHhCCC-Chhhcccc
Confidence 111223456889999998865 45789999999999999999999999654332111 11 00000000 00000
Q ss_pred ----c-----ccccC----CCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 708 ----D-----PFLKG----NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 708 ----d-----~~l~~----~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
+ +.... ...+..+.++.+++.+|++.+|++||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 232 TSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred ccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 00000 012234567899999999999999999999985
No 318
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=4.9e-34 Score=310.54 Aligned_cols=268 Identities=23% Similarity=0.324 Sum_probs=199.9
Q ss_pred HhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhcc-ccceeeeEeeeeecC--Cce
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDD--GQM 547 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~--~~~ 547 (767)
..++|...+.||+|+||.||+|....+++.+|+|++... .......+.+|+.++.++ +||||++++++|... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 456788888999999999999999877789999988543 223345678899999999 999999999998654 368
Q ss_pred EEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccC
Q 042216 548 ILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFG 627 (767)
Q Consensus 548 ~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~ 627 (767)
++||||++ ++|.+++... .++|..+..++.|++.||.||| +.+|+|+||||+||++++++.+||+|||+++..
T Consensus 85 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~ 157 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLARSL 157 (337)
T ss_pred EEEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccchhcc
Confidence 99999997 5999988543 6889999999999999999999 788999999999999999999999999998754
Q ss_pred CCCCCc---cccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHH--------
Q 042216 628 PNFSKT---HVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWAT-------- 695 (767)
Q Consensus 628 ~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~-------- 695 (767)
...... .......|+..|+|||.+.. ..++.++||||||+++|||++|+.||......+.........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 237 (337)
T cd07852 158 SELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDI 237 (337)
T ss_pred ccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 332211 12233458889999998754 567899999999999999999999996543321110000000
Q ss_pred HHhhcCCccccccccc------cCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 696 ECYRNGKIGDIIDPFL------KGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 696 ~~~~~~~~~~~~d~~l------~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
..+......++++... .....+..+.++.+++.+||+.+|.+|||+.++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 238 ESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0000000000111000 001112246778999999999999999999999964
No 319
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-34 Score=307.67 Aligned_cols=252 Identities=23% Similarity=0.352 Sum_probs=203.9
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCC--CCCcchhHHHHHHHHHhccc-cceeeeEeeeeecCCceEEE
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNP--GSQQGALEFQTEIGMLSQLR-YLHLVSLIGYCNDDGQMILV 550 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~--~~~~~~~~f~~Ei~~l~~l~-Hpniv~l~g~~~~~~~~~lV 550 (767)
...|+.+++||+||.++||++...+ .+.+|+|++.. ...+...-|.+|+..|.+|+ |.+|++|++|-..++.+|||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv 438 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV 438 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence 3468888899999999999998764 46788887643 35556677999999999995 89999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCC
Q 042216 551 YDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNF 630 (767)
Q Consensus 551 ~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~ 630 (767)
|||=+. +|.++|.+.......| .+..+..|++.++.++| ..+|||.||||.|.|+-. |.+||+|||+|......
T Consensus 439 mE~Gd~-DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH---~~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~D 512 (677)
T KOG0596|consen 439 MECGDI-DLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIH---QHGIVHSDLKPANFLLVK-GRLKLIDFGIANAIQPD 512 (677)
T ss_pred eecccc-cHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHH---HhceeecCCCcccEEEEe-eeEEeeeechhcccCcc
Confidence 997544 9999998776666667 67788999999999999 788999999999999875 59999999999987776
Q ss_pred CCccccccccCCCcccChhhhccC-----------CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhh
Q 042216 631 SKTHVSTQVKGSIGYLDPEYYRLQ-----------LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYR 699 (767)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~~-----------~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~ 699 (767)
...-.....+||+.||+||.+... +.+.+|||||+||+||+|+.|++||..... .|.
T Consensus 513 TTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n-------~~a----- 580 (677)
T KOG0596|consen 513 TTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN-------QIA----- 580 (677)
T ss_pred ccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH-------HHH-----
Confidence 666666778899999999998632 256799999999999999999999943211 111
Q ss_pred cCCccccccccccCCCChhh-HHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 700 NGKIGDIIDPFLKGNAPPVC-LNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 700 ~~~~~~~~d~~l~~~~~~~~-~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
++..+.||.-..++|..- ..+++++++.||..||.+||++.++|+
T Consensus 581 --Kl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 581 --KLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred --HHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 234455664444443322 233999999999999999999999984
No 320
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.8e-33 Score=297.25 Aligned_cols=245 Identities=24% Similarity=0.342 Sum_probs=196.5
Q ss_pred eeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCCh
Q 042216 483 IGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGTL 559 (767)
Q Consensus 483 LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gsL 559 (767)
||+|+||+||++.....++.+|+|.+.... ......+.+|+++++.++|||++++++.+...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999988888899999986432 22344577899999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccccc
Q 042216 560 RDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQV 639 (767)
Q Consensus 560 ~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~ 639 (767)
.+++.+.....+++.++..++.|++.||.||| ..+++|+||+|+||++++++.+||+|||++..... .......
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~---~~~~~~~ 154 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG---GKKIKGR 154 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhhhcc---CCccccc
Confidence 99997665557999999999999999999999 78899999999999999999999999999875432 1112234
Q ss_pred cCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhh
Q 042216 640 KGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVC 719 (767)
Q Consensus 640 ~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 719 (767)
.++..|+|||.+.+..++.++|||||||+++||++|+.||......... ... ...... .....+...
T Consensus 155 ~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--~~~-~~~~~~----------~~~~~~~~~ 221 (277)
T cd05577 155 AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEK--EEL-KRRTLE----------MAVEYPDKF 221 (277)
T ss_pred cCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccH--HHH-Hhcccc----------ccccCCccC
Confidence 5778999999998888999999999999999999999999654331111 000 000000 111233445
Q ss_pred HHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 042216 720 LNQFVEVAMSCVNDDRIRRP-----SMSDVVW 746 (767)
Q Consensus 720 ~~~l~~li~~Cl~~dp~~RP-----s~~evl~ 746 (767)
+..+.+++.+||+.+|.+|| ++.+++.
T Consensus 222 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 222 SPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred CHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 67789999999999999999 6666653
No 321
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-35 Score=311.95 Aligned_cols=250 Identities=22% Similarity=0.358 Sum_probs=206.4
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCC
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMAR 556 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~ 556 (767)
+.++..||.|+||+||+++.+..+-..|-|.+...+..+..+|+-||++|..+.||+||+|++.+..++.++++.|||.|
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G 113 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG 113 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence 44455699999999999999987777788988877888888999999999999999999999999999999999999999
Q ss_pred CChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcccc
Q 042216 557 GTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVS 636 (767)
Q Consensus 557 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~ 636 (767)
|-.+..+..-. .+|++.++.-+|.+++.||.||| ++.|||||||+.|||++.+|.++|+|||.+.... ......
T Consensus 114 GAVDaimlEL~-r~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~--~t~qkR 187 (1187)
T KOG0579|consen 114 GAVDAIMLELG-RVLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNK--STRQKR 187 (1187)
T ss_pred chHhHHHHHhc-cccchHHHHHHHHHHHHHHHHHh---hcchhhhhccccceEEEecCcEeeecccccccch--hHHhhh
Confidence 99988776543 46999999999999999999999 8899999999999999999999999999975321 222234
Q ss_pred ccccCCCcccChhhhc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccc
Q 042216 637 TQVKGSIGYLDPEYYR-----LQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFL 711 (767)
Q Consensus 637 ~~~~gt~~y~aPE~~~-----~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 711 (767)
....||+.|||||+.. ..+|+.++||||||++|.||..+.+|-....... .+. .+.......++
T Consensus 188 DsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMR--Vll-----KiaKSePPTLl---- 256 (1187)
T KOG0579|consen 188 DSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMR--VLL-----KIAKSEPPTLL---- 256 (1187)
T ss_pred ccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHH--HHH-----HHhhcCCCccc----
Confidence 4678999999999875 4689999999999999999999999975443221 111 11222222221
Q ss_pred cCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 712 KGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 712 ~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.|......+.+++..||..||..||+++++++
T Consensus 257 ---qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 257 ---QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred ---CcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 25567788999999999999999999999983
No 322
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=3.5e-33 Score=290.13 Aligned_cols=248 Identities=26% Similarity=0.424 Sum_probs=204.5
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC--cchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ--QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~--~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
+|+..+.||+|++|.||+++....++.+++|.+..... .....+.+|++++++++|+|++++++++.+++..++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 46677899999999999999987888999999976643 4556789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+++++|.+++... ..+++..+..++.|++.||.||| +.+|+|+||||+||+++.++.++|+|||++........
T Consensus 81 ~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 154 (254)
T cd06627 81 AENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK- 154 (254)
T ss_pred CCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc-
Confidence 9999999998654 46999999999999999999999 78899999999999999999999999999886533221
Q ss_pred cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccC
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKG 713 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 713 (767)
......++..|+|||.......+.++||||+|++++||++|+.|+...... ...+.. ... ...
T Consensus 155 -~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~----~~~~~~---~~~---------~~~ 217 (254)
T cd06627 155 -DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM----AALFRI---VQD---------DHP 217 (254)
T ss_pred -cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH----HHHHHH---hcc---------CCC
Confidence 123345788999999998888899999999999999999999998643321 111110 011 011
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 714 NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 714 ~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
..+...+..+.+++.+||..+|++||++.+++.
T Consensus 218 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 218 PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 223345677899999999999999999999974
No 323
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2e-33 Score=304.67 Aligned_cols=260 Identities=20% Similarity=0.255 Sum_probs=195.6
Q ss_pred eeecc--CcEEEEEEEecCCCceEEEEEeCCCC--CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCC
Q 042216 482 IIGRG--GFGNVYKGFLNGDSTPVAIKRLNPGS--QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARG 557 (767)
Q Consensus 482 ~LG~G--~fG~Vy~g~~~~~~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~g 557 (767)
.||+| +||+||++++...++.||+|++.... ....+.+.+|+.+++.++||||+++++++..++..++|+||+.+|
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 46666 99999999998888999999986542 223456889999999999999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc-c--
Q 042216 558 TLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT-H-- 634 (767)
Q Consensus 558 sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~-~-- 634 (767)
+|.+++.+.....+++..+..++.|++.||.||| +.+++||||||+|||++.++.+|++||+.+......... .
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (328)
T cd08226 85 SANSLLKTYFPEGMSEALIGNILFGALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVV 161 (328)
T ss_pred CHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccc
Confidence 9999997655556899999999999999999999 788999999999999999999999999865322110000 0
Q ss_pred --ccccccCCCcccChhhhccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHH--------------
Q 042216 635 --VSTQVKGSIGYLDPEYYRLQ--LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATE-------------- 696 (767)
Q Consensus 635 --~~~~~~gt~~y~aPE~~~~~--~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~-------------- 696 (767)
......++..|+|||++.+. .++.++|||||||+++||++|+.||....... .+......
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 239 (328)
T cd08226 162 YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQ--MLLQKLKGPPYSPLDITTFPCE 239 (328)
T ss_pred ccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHH--HHHHHhcCCCCCCccccccchh
Confidence 00112345679999999763 57899999999999999999999996543211 11100000
Q ss_pred ------------------HhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 697 ------------------CYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 697 ------------------~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.........+.+..++...+..+...+.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 240 ESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred hhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 00000000111122222233456778999999999999999999999984
No 324
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2.4e-33 Score=300.82 Aligned_cols=268 Identities=21% Similarity=0.293 Sum_probs=196.7
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC--CcchhHHHHHHHHHhccccceeeeEeeeeecCC------
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS--QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDG------ 545 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~------ 545 (767)
.++|+..+.||+|+||.||++....+++.||||++.... ......+.+|++++++++||||++++++|...+
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 357888999999999999999998888999999886432 222335678999999999999999999987654
Q ss_pred --ceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCC
Q 042216 546 --QMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGL 623 (767)
Q Consensus 546 --~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGl 623 (767)
..++||||+.+ +|.+++.... ..+++.+++.++.|++.||.||| +++++|+||||+||+++.++.+||+|||+
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~ 165 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADFGL 165 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEECcCCC
Confidence 45999999975 8888875433 35899999999999999999999 77899999999999999999999999999
Q ss_pred cccCCCCCCc--cccccccCCCcccChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhc
Q 042216 624 CKFGPNFSKT--HVSTQVKGSIGYLDPEYYRLQ-LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRN 700 (767)
Q Consensus 624 a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~ 700 (767)
+......... .......++..|+|||.+.+. .++.++||||||+++|||++|+.||.....................
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (310)
T cd07865 166 ARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITP 245 (310)
T ss_pred cccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 8754322111 112234577889999988664 4788999999999999999999998654432222111111100000
Q ss_pred CCcc-----cccccc-ccCC---------CChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 701 GKIG-----DIIDPF-LKGN---------APPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 701 ~~~~-----~~~d~~-l~~~---------~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.... +..+.. +... .+......+.+++.+||+.||.+|||++|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 246 EVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred hhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 0000 000000 0000 01112356789999999999999999999974
No 325
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=3e-33 Score=291.00 Aligned_cols=250 Identities=25% Similarity=0.421 Sum_probs=206.8
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC--cchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ--QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~--~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
+|...+.||+|+||.||++....+++.+++|++..... ....++.+|+++++.++|+|++++.+.+..++..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 46777899999999999999987788999999875533 4556789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCC--CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 554 MARGTLRDHLYNND--NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 554 ~~~gsL~~~L~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
+++++|.+++.+.. ...+++.++..++.+++.||.||| +.+++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999997643 467999999999999999999999 6789999999999999999999999999987643322
Q ss_pred CccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccc
Q 042216 632 KTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFL 711 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 711 (767)
.......++..|+|||.+....++.++||||+|+++++|++|+.||...... ....... ...
T Consensus 158 --~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~------~~~~~~~-~~~--------- 219 (258)
T cd08215 158 --DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL------ELALKIL-KGQ--------- 219 (258)
T ss_pred --ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH------HHHHHHh-cCC---------
Confidence 1223346888999999999888999999999999999999999998544321 1111111 111
Q ss_pred cCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 712 KGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 712 ~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
....+......+.+++.+||..+|.+||++.++++
T Consensus 220 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 220 YPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 11223355678899999999999999999999975
No 326
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=3e-33 Score=295.89 Aligned_cols=258 Identities=23% Similarity=0.277 Sum_probs=194.6
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC-CcchhHHHHHHHHHhccc-cceeeeEeeeeecC--CceEEEEe
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS-QQGALEFQTEIGMLSQLR-YLHLVSLIGYCNDD--GQMILVYD 552 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~-Hpniv~l~g~~~~~--~~~~lV~e 552 (767)
|...+.||+|+||.||+|....+++.+|+|+++... ........+|+.++.++. |+|++++++++.+. +..++|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 455678999999999999998888999999987542 222234567888898885 99999999999877 89999999
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK 632 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~ 632 (767)
|++ |+|.+++.... ..++|.++..++.|++.||.||| ..+++||||||+||+++. +.+||+|||+++......
T Consensus 81 ~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~- 153 (282)
T cd07831 81 LMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP- 153 (282)
T ss_pred cCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEecccccccccCC-
Confidence 997 58888886533 46899999999999999999999 778999999999999999 999999999987543211
Q ss_pred ccccccccCCCcccChhhhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHh-----------hc
Q 042216 633 THVSTQVKGSIGYLDPEYYR-LQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECY-----------RN 700 (767)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~-~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~-----------~~ 700 (767)
......++..|+|||++. .+.++.++|||||||++|||++|+.||......+ ...+..... ..
T Consensus 154 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd07831 154 --PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD---QIAKIHDVLGTPDAEVLKKFRK 228 (282)
T ss_pred --CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH---HHHHHHHHcCCCCHHHHHhhcc
Confidence 112345788999999765 4567899999999999999999999996543321 111111111 00
Q ss_pred CCccccccccccC----CCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 701 GKIGDIIDPFLKG----NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 701 ~~~~~~~d~~l~~----~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
........+.... ......+..+.+++.+||+.+|++||+++++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 229 SRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 0000100000000 011235678999999999999999999999975
No 327
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-34 Score=299.69 Aligned_cols=245 Identities=24% Similarity=0.357 Sum_probs=207.8
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
+.|..-++||+||||.||-++.+.+++.+|.|++.+. ..++..--++|-.||++++.+.||.+--.++..+.++||+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 5688888999999999999999999999999988543 3344555688999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
..|.||+|.-||.+..+..+++..+.-.+.+|+.||++|| ...||.|||||+|||||+.|+++|+|+|||...+.
T Consensus 265 tlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~-- 339 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE-- 339 (591)
T ss_pred EeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHH---hcceeeccCChhheeeccCCCeEeeccceEEecCC--
Confidence 9999999999999888888999999999999999999999 78899999999999999999999999999986543
Q ss_pred CccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccc
Q 042216 632 KTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFL 711 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 711 (767)
.......+||.+|||||++.++.|+...|.||+||+||||+.|+.||....+.... +-+|.+.
T Consensus 340 -g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~----------------eEvdrr~ 402 (591)
T KOG0986|consen 340 -GKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKR----------------EEVDRRT 402 (591)
T ss_pred -CCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhH----------------HHHHHHH
Confidence 22334458999999999999999999999999999999999999999554332111 0111111
Q ss_pred ---cCCCChhhHHHHHHHHHHccccCCCCCCCH
Q 042216 712 ---KGNAPPVCLNQFVEVAMSCVNDDRIRRPSM 741 (767)
Q Consensus 712 ---~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~ 741 (767)
...++...+++...+....|+.||.+|.-.
T Consensus 403 ~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 403 LEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred hcchhhcccccCHHHHHHHHHHHccCHHHhccC
Confidence 123566778888999999999999999743
No 328
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2.3e-33 Score=292.07 Aligned_cols=248 Identities=26% Similarity=0.403 Sum_probs=204.8
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
+|+..+.||+|+||.||+++...+++.+++|.+... ......++.+|++++++++|+||+++.+++.+....++|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 467788999999999999998888889999998654 233455788999999999999999999999999999999999
Q ss_pred CCCCChhhhhccC--CCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 554 MARGTLRDHLYNN--DNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 554 ~~~gsL~~~L~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
+++++|.+++.+. ....+++..++.++.|++.||.||| +.+++|+||+|+||++++++.+||+|||+++.....
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 9999999998652 2356899999999999999999999 788999999999999999999999999998765432
Q ss_pred CccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccc
Q 042216 632 KTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFL 711 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 711 (767)
......++..|+|||.+.+..++.++|+||||++++||++|+.||......+ +.. ....+..
T Consensus 157 ---~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~---~~~----~~~~~~~-------- 218 (256)
T cd08530 157 ---MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD---LRY----KVQRGKY-------- 218 (256)
T ss_pred ---CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHH----HHhcCCC--------
Confidence 2223457889999999999999999999999999999999999996543221 111 1111111
Q ss_pred cCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 712 KGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 712 ~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
...+.....++.+++.+|++.+|.+||++.++++
T Consensus 219 -~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 219 -PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred -CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 1223355677999999999999999999999975
No 329
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=8.5e-34 Score=308.55 Aligned_cols=264 Identities=22% Similarity=0.283 Sum_probs=198.1
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecC-----Cce
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDD-----GQM 547 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~-----~~~ 547 (767)
+++|...+.||+|+||.||+|....+++.||+|++.... ......+.+|+.++++++|+||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 468999999999999999999998888999999986532 23445688899999999999999999987644 357
Q ss_pred EEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccC
Q 042216 548 ILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFG 627 (767)
Q Consensus 548 ~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~ 627 (767)
++++||+.+ +|.+++.. ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 84 ~lv~e~~~~-~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~ 156 (336)
T cd07849 84 YIVQELMET-DLYKLIKT---QHLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLARIA 156 (336)
T ss_pred EEEehhccc-CHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECcccceeec
Confidence 999999975 88887743 35899999999999999999999 788999999999999999999999999998754
Q ss_pred CCCCC-ccccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCC---
Q 042216 628 PNFSK-THVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGK--- 702 (767)
Q Consensus 628 ~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~--- 702 (767)
..... ........|+..|+|||.+.+ ..++.++|||||||++|||++|+.||....... ........+....
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~---~~~~~~~~~~~~~~~~ 233 (336)
T cd07849 157 DPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH---QLNLILGVLGTPSQED 233 (336)
T ss_pred cccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHcCCCCHHH
Confidence 32111 111223467899999998754 568999999999999999999999995433211 1111111111000
Q ss_pred cccccccc-------c--cCC-----CChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 703 IGDIIDPF-------L--KGN-----APPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 703 ~~~~~d~~-------l--~~~-----~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
...+.+.. . ... ..+..+.++.+++.+||+.+|++|||+.|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 234 LNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000000 0 000 011235668899999999999999999999865
No 330
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.9e-33 Score=297.37 Aligned_cols=260 Identities=22% Similarity=0.261 Sum_probs=200.8
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCc--chhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQ--GALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~--~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
|...+.||+|++|.||++....+++.+++|++...... ....+..|++++++++|+||+++++++..++..++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 45567899999999999999878899999998754322 3457889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
++ +|.+++.... ..+++.++..++.|++.||.||| ..+++|+||||+||+++.++.+||+|||.+....... .
T Consensus 81 ~~-~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--~ 153 (283)
T cd05118 81 DT-DLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--R 153 (283)
T ss_pred CC-CHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc--c
Confidence 75 8988886543 46899999999999999999999 7889999999999999999999999999987653322 1
Q ss_pred ccccccCCCcccChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcC---Ccccccc--
Q 042216 635 VSTQVKGSIGYLDPEYYRLQ-LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNG---KIGDIID-- 708 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~d-- 708 (767)
......++..|+|||.+.+. .++.++|+||||+++++|++|+.||......+.... ........ ......+
T Consensus 154 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd05118 154 PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFK---IFRTLGTPDPEVWPKFTSLA 230 (283)
T ss_pred cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHHcCCCchHhcccchhhh
Confidence 12234577889999998876 789999999999999999999999865443221111 11110000 0000000
Q ss_pred ----ccc-------cCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 709 ----PFL-------KGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 709 ----~~l-------~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
... .....+..+.++.+++.+||+.||.+||++++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 231 RNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 000 00112235678999999999999999999999975
No 331
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=2.7e-33 Score=300.82 Aligned_cols=264 Identities=23% Similarity=0.313 Sum_probs=197.8
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC--cchhHHHHHHHHHhccccceeeeEeeeeecC--CceEE
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ--QGALEFQTEIGMLSQLRYLHLVSLIGYCNDD--GQMIL 549 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~--~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~--~~~~l 549 (767)
..+|+..+.||+|+||.||+|.....++.||+|+++.... .....+.+|+.++++++|+|++++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 3578899999999999999999988889999999864422 2233567899999999999999999998654 56899
Q ss_pred EEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCC
Q 042216 550 VYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPN 629 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~ 629 (767)
||||+++ +|.+++.... ..+++.++..++.|++.||+||| +.+++||||||+||++++++.+||+|||+++....
T Consensus 86 v~e~~~~-~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 86 VMEYCEQ-DLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred EEecCCC-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 9999975 8888886533 46899999999999999999999 78899999999999999999999999999876433
Q ss_pred CCCccccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcC--Ccc-c
Q 042216 630 FSKTHVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNG--KIG-D 705 (767)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~--~~~-~ 705 (767)
.. .......++..|+|||.+.+ ..++.++|||||||++|||++|++||......+.... ........ ... .
T Consensus 161 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~---~~~~~~~~~~~~~~~ 235 (309)
T cd07845 161 PA--KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDL---IIQLLGTPNESIWPG 235 (309)
T ss_pred cc--CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHhcCCCChhhchh
Confidence 21 11222345778999999865 5678999999999999999999999965443221111 11110000 000 0
Q ss_pred c-----ccc-cccCC-------CChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 706 I-----IDP-FLKGN-------APPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 706 ~-----~d~-~l~~~-------~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
. ... .+... .....+.++.+++.+|++.||++|||+.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 236 FSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred hhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0 000 00000 001135667899999999999999999999853
No 332
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-34 Score=296.70 Aligned_cols=247 Identities=22% Similarity=0.324 Sum_probs=207.9
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCc--chhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQ--GALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~--~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
-|+..+.||+|.|..|-++++-=.|..||||++.+.... ..-.+.+|++.|+.++|||||+|+.+......+|||.|.
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL 98 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL 98 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence 455666899999999999998777899999999765332 334588999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEEC-CCCcEEEeecCCcccCCCCCC
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLD-EEWVAKVSDFGLCKFGPNFSK 632 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld-~~~~~ki~DfGla~~~~~~~~ 632 (767)
=++|+|++||.++.. .+.+....+++.||..|+.|+| ...+|||||||+||.+- .-|-+||+|||++-.+..
T Consensus 99 GD~GDl~DyImKHe~-Gl~E~La~kYF~QI~~AI~YCH---qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P--- 171 (864)
T KOG4717|consen 99 GDGGDLFDYIMKHEE-GLNEDLAKKYFAQIVHAISYCH---QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP--- 171 (864)
T ss_pred cCCchHHHHHHhhhc-cccHHHHHHHHHHHHHHHHHHh---hhhhhcccCCcceeEEeeecCceEeeeccccccCCC---
Confidence 999999999977653 5899999999999999999999 66799999999998775 567899999999864433
Q ss_pred ccccccccCCCcccChhhhccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccc
Q 042216 633 THVSTQVKGSIGYLDPEYYRLQLLT-EKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFL 711 (767)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~~~~s-~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 711 (767)
....+..+|+..|.|||++.+..|+ ++.||||+||+||.|+||++||....+.+.... ++| -
T Consensus 172 G~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTm---------------ImD--C 234 (864)
T KOG4717|consen 172 GKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTM---------------IMD--C 234 (864)
T ss_pred cchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhh---------------hhc--c
Confidence 3344567899999999999998886 679999999999999999999977665443322 122 1
Q ss_pred cCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 712 KGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 712 ~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
+...|...+.++.+||..||..||++|.+.++|+.
T Consensus 235 KYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 235 KYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred cccCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 22356778889999999999999999999999874
No 333
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.1e-33 Score=307.93 Aligned_cols=269 Identities=22% Similarity=0.275 Sum_probs=202.0
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeecC-----Cc
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDD-----GQ 546 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~-----~~ 546 (767)
.++|...+.||+|+||+||++....+++.||||.+... .......+.+|+.+++.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 45788899999999999999999888899999998653 233345678899999999999999999988644 35
Q ss_pred eEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCccc
Q 042216 547 MILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKF 626 (767)
Q Consensus 547 ~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~ 626 (767)
.++++||+. ++|.+++... ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||+++.
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 157 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLART 157 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcCccccc
Confidence 899999996 6899888543 46999999999999999999999 78899999999999999999999999999875
Q ss_pred CCCCCCccccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHH--------HH
Q 042216 627 GPNFSKTHVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWAT--------EC 697 (767)
Q Consensus 627 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~--------~~ 697 (767)
..... .......++..|+|||.+.. ..++.++|||||||++|||++|++||......+......-.. ..
T Consensus 158 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07858 158 TSEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGF 235 (337)
T ss_pred cCCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhh
Confidence 43221 12233457889999998865 568899999999999999999999996543211111000000 00
Q ss_pred hhcCCccc-------cccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHh
Q 042216 698 YRNGKIGD-------IIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG--LEFV 751 (767)
Q Consensus 698 ~~~~~~~~-------~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~--L~~~ 751 (767)
.......+ ..+..+. ...+.++.++.+++.+||+.+|++|||++++++. ++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 236 IRNEKARRYIRSLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred cCchhhhHHHHhcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 00000000 0000000 0112456778999999999999999999999966 5544
No 334
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=3.5e-33 Score=305.91 Aligned_cols=264 Identities=22% Similarity=0.246 Sum_probs=200.1
Q ss_pred HhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeecC------
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDD------ 544 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~------ 544 (767)
..++|+..+.||+|+||.||++....+++.||+|++... ......++.+|+.++++++|+||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 457899999999999999999999888899999998643 233345678899999999999999999988643
Q ss_pred CceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCc
Q 042216 545 GQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLC 624 (767)
Q Consensus 545 ~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla 624 (767)
...++||||+.+ +|.+.+... +++..+..++.|++.||+||| ..+|+||||||+|||++.++.+||+|||++
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~ 165 (353)
T cd07850 94 QDVYLVMELMDA-NLCQVIQMD----LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLA 165 (353)
T ss_pred CcEEEEEeccCC-CHHHHHhhc----CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCccc
Confidence 357999999964 888887432 889999999999999999999 778999999999999999999999999999
Q ss_pred ccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHH---------HH--
Q 042216 625 KFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLA---------VW-- 693 (767)
Q Consensus 625 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~---------~~-- 693 (767)
+..... .......++..|+|||.+.+..++.++|||||||++++|++|+.||...+........ .+
T Consensus 166 ~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
T cd07850 166 RTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMS 242 (353)
T ss_pred eeCCCC---CCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 754321 1123345788999999999999999999999999999999999999654321110000 00
Q ss_pred -----HHHHhhcCC------ccccccccc----cCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 694 -----ATECYRNGK------IGDIIDPFL----KGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 694 -----~~~~~~~~~------~~~~~d~~l----~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
......... ..++....+ ....+.....++.+++.+||+.||.+|||+.|++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 243 RLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000000 000110000 011122346678899999999999999999999843
No 335
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.2e-33 Score=307.19 Aligned_cols=268 Identities=19% Similarity=0.260 Sum_probs=200.7
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC--CcchhHHHHHHHHHhccccceeeeEeeeeec----CCce
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS--QQGALEFQTEIGMLSQLRYLHLVSLIGYCND----DGQM 547 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~----~~~~ 547 (767)
..+|+..+.||+|+||.||+|....+++.||+|++.... ......+.+|+.+|++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 367888899999999999999998888999999987542 2345567889999999999999999998753 3468
Q ss_pred EEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccC
Q 042216 548 ILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFG 627 (767)
Q Consensus 548 ~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~ 627 (767)
++|+||+. |+|.+++... ..+++..+..++.|++.||.||| .++|+||||||+||++++++.+||+|||+++..
T Consensus 84 ~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGMARGL 157 (334)
T ss_pred EEEEehhh-hhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEecccccceee
Confidence 99999996 5899988543 45899999999999999999999 778999999999999999999999999998754
Q ss_pred CCCCCc--cccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHH--------H
Q 042216 628 PNFSKT--HVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWAT--------E 696 (767)
Q Consensus 628 ~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~--------~ 696 (767)
...... .......++..|+|||.+.. ..++.++|||||||++|||++|+.||.............-.. .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~ 237 (334)
T cd07855 158 SSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLN 237 (334)
T ss_pred cccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhh
Confidence 322111 11223468889999999865 568899999999999999999999996543321111100000 0
Q ss_pred HhhcCCcccccccc-ccCC-----CChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 697 CYRNGKIGDIIDPF-LKGN-----APPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 697 ~~~~~~~~~~~d~~-l~~~-----~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
......+.+.++.. .... ..+..+.++.+++.+||+.+|.+||++.+++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 238 RIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 00000000000000 0000 112346779999999999999999999998863
No 336
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=5.3e-33 Score=294.63 Aligned_cols=261 Identities=23% Similarity=0.305 Sum_probs=196.0
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC--cchhHHHHHHHHHhcc---ccceeeeEeeeeecCCc-----
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ--QGALEFQTEIGMLSQL---RYLHLVSLIGYCNDDGQ----- 546 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~--~~~~~f~~Ei~~l~~l---~Hpniv~l~g~~~~~~~----- 546 (767)
|+..+.||+|+||.||+|+.+.+++.+|+|++..... .....+.+|+.++.++ +|+|++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 4567789999999999999987788999999974422 2234566787777665 59999999999987776
Q ss_pred eEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCccc
Q 042216 547 MILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKF 626 (767)
Q Consensus 547 ~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~ 626 (767)
.+++|||+.+ +|.+++.......+++.+++.++.|++.||.||| +.+++|+||+|+||+++.++.+||+|||++..
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEeccCccee
Confidence 9999999975 8999887654456999999999999999999999 77899999999999999999999999999876
Q ss_pred CCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCc---
Q 042216 627 GPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKI--- 703 (767)
Q Consensus 627 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~--- 703 (767)
..... ......++..|+|||.+.+..++.++|+|||||++|||++|++||......+ .+..+..........
T Consensus 157 ~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07838 157 YSFEM---ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD--QLDKIFDVIGLPSEEEWP 231 (287)
T ss_pred ccCCc---ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH--HHHHHHHHcCCCChHhcC
Confidence 43221 1122347888999999998899999999999999999999999986543321 111111111000000
Q ss_pred ------ccccccccc---CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 704 ------GDIIDPFLK---GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 704 ------~~~~d~~l~---~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
......... ....+.....+.+++.+||+.||.+||++.|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 232 RNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 000000000 0011223467789999999999999999999874
No 337
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2.1e-33 Score=293.54 Aligned_cols=245 Identities=27% Similarity=0.331 Sum_probs=197.2
Q ss_pred eeccCcEEEEEEEecCCCceEEEEEeCCCCC---cchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCCh
Q 042216 483 IGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ---QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGTL 559 (767)
Q Consensus 483 LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gsL 559 (767)
||+|+||.||+++....++.+++|.+..... .....+.+|++++++++|||++++++.+..+...++++||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 6899999999999987788999999865433 3456788999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC------c
Q 042216 560 RDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK------T 633 (767)
Q Consensus 560 ~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~------~ 633 (767)
.+++.+.. .+++..+..++.|+++||.||| ..+++|+||+|+||++++++.++|+|||++........ .
T Consensus 81 ~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 155 (265)
T cd05579 81 ASLLENVG--SLDEDVARIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDE 155 (265)
T ss_pred HHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccc
Confidence 99996543 6899999999999999999999 78899999999999999999999999999875432211 1
Q ss_pred cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccC
Q 042216 634 HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKG 713 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 713 (767)
.......++..|+|||.......+.++||||||++++||++|+.||......+ ..... ..+..
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~------~~~~~-~~~~~---------- 218 (265)
T cd05579 156 KEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEE------IFQNI-LNGKI---------- 218 (265)
T ss_pred ccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH------HHHHH-hcCCc----------
Confidence 12233457889999999988889999999999999999999999996443211 11111 11110
Q ss_pred CCChh--hHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 042216 714 NAPPV--CLNQFVEVAMSCVNDDRIRRPSMSDVVWGLE 749 (767)
Q Consensus 714 ~~~~~--~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~ 749 (767)
..+.. .+..+.+++.+||+.+|.+|||+.++.+.|+
T Consensus 219 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 219 EWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred CCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 11112 2677899999999999999999966555443
No 338
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=5.8e-33 Score=291.18 Aligned_cols=251 Identities=23% Similarity=0.335 Sum_probs=199.9
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC-----CCcchhHHHHHHHHHhccccceeeeEeeeeecC--Cce
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG-----SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDD--GQM 547 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~-----~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~--~~~ 547 (767)
.+|...+.||+|+||.||+|.....++.+|+|.+... ..+....+.+|++++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4688888999999999999999888899999987432 223345788999999999999999999998654 468
Q ss_pred EEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccC
Q 042216 548 ILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFG 627 (767)
Q Consensus 548 ~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~ 627 (767)
++++||+++++|.+++... ..+++.....++.|++.||.||| +.+++|+||||+||+++.++.++|+|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 156 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAY--GALTENVTRRYTRQILQGVSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRI 156 (264)
T ss_pred EEEEEeCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcccccccc
Confidence 8999999999999998643 34889999999999999999999 778999999999999999999999999998754
Q ss_pred CCCCC-ccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccc
Q 042216 628 PNFSK-THVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDI 706 (767)
Q Consensus 628 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 706 (767)
..... ........++..|+|||++.+..++.++|+|||||+++||++|+.||........ . ......
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~----~~~~~~------ 224 (264)
T cd06653 157 QTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAA--I----FKIATQ------ 224 (264)
T ss_pred ccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHH--H----HHHHcC------
Confidence 32111 1111234588899999999988899999999999999999999999964422111 0 111111
Q ss_pred ccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 707 IDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 707 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
......+....+.+.+++.+||+ +|.+||+..+++.
T Consensus 225 ---~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 225 ---PTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred ---CCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 11122355566789999999999 5799999998764
No 339
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=5e-33 Score=294.43 Aligned_cols=263 Identities=21% Similarity=0.305 Sum_probs=198.2
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC-cchhHHHHHHHHHhccc-cceeeeEeeeeecCCceEEEEecC
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ-QGALEFQTEIGMLSQLR-YLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~-Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
|...+.||+|++|+||+|+..+.++.|+||++..... .......+|+..+.+++ |+|++++++++..++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 4566789999999999999987788999999865432 22334567999999999 999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
+|+|.+++.......+++.++..++.|++.+|.||| +++++|+||+|+||++++++.++|+|||+++......
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~--- 153 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP--- 153 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecccceeccCCC---
Confidence 789999987665457899999999999999999999 7789999999999999999999999999987543211
Q ss_pred ccccccCCCcccChhhhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhH----------HHHHHHHhhcCCc
Q 042216 635 VSTQVKGSIGYLDPEYYR-LQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNL----------AVWATECYRNGKI 703 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~-~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l----------~~~~~~~~~~~~~ 703 (767)
......++..|+|||.+. ...++.++|+||||++++||++|++||......+...- ..|..........
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd07830 154 PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKL 233 (283)
T ss_pred CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccc
Confidence 122345788999999875 45688999999999999999999999855433211100 0011111000011
Q ss_pred ccccccccc---CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 704 GDIIDPFLK---GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 704 ~~~~d~~l~---~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
...+..... ....+....++.+++.+||+.+|.+||++.|++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 234 GFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred cccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 000000000 0001112467899999999999999999999975
No 340
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=3.9e-33 Score=297.20 Aligned_cols=244 Identities=20% Similarity=0.331 Sum_probs=198.4
Q ss_pred eeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCChh
Q 042216 481 LIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGTLR 560 (767)
Q Consensus 481 ~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gsL~ 560 (767)
..||+|+||.||++.....++.||||++..........+.+|+.+++.++|+|++++++++...+..+++|||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 46999999999999998888999999986555555667899999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcccccccc
Q 042216 561 DHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQVK 640 (767)
Q Consensus 561 ~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~~ 640 (767)
+++.. ..+++.....++.|++.||+||| +.+++|+||+|+||++++++.++|+|||++....... .......
T Consensus 106 ~~~~~---~~~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~--~~~~~~~ 177 (292)
T cd06657 106 DIVTH---TRMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRRKSLV 177 (292)
T ss_pred HHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccccceeccccc--ccccccc
Confidence 98743 24899999999999999999999 7789999999999999999999999999986543211 1223345
Q ss_pred CCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhhH
Q 042216 641 GSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCL 720 (767)
Q Consensus 641 gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 720 (767)
++..|+|||.+....++.++|+||||+++|||++|..||......+. ......... +.+. .....+
T Consensus 178 ~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~---~~~~~~~~~---------~~~~--~~~~~~ 243 (292)
T cd06657 178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA---MKMIRDNLP---------PKLK--NLHKVS 243 (292)
T ss_pred cCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHhhCC---------cccC--CcccCC
Confidence 78999999999888899999999999999999999999864332211 111111100 0110 112345
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 721 NQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 721 ~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
..+.+++.+||+.+|.+||++.++++
T Consensus 244 ~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 244 PSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred HHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 56889999999999999999999986
No 341
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.5e-32 Score=288.86 Aligned_cols=251 Identities=21% Similarity=0.238 Sum_probs=195.4
Q ss_pred HHHHHHHhhccccceee--eccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhcc-ccceeeeEeeeeec
Q 042216 467 ISEIKEATKDFNNLLII--GRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQL-RYLHLVSLIGYCND 543 (767)
Q Consensus 467 ~~ei~~~t~~f~~~~~L--G~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~ 543 (767)
..++....++|...+.+ |+|+||.||++..+.++..+|+|.+....... .|+.....+ +|||++++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~ 80 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTT 80 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEec
Confidence 34445555677776666 99999999999998888899999986432211 122222222 69999999999999
Q ss_pred CCceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCC-cEEEeecC
Q 042216 544 DGQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEW-VAKVSDFG 622 (767)
Q Consensus 544 ~~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~-~~ki~DfG 622 (767)
.+..++||||+++|+|.+++.... .+++.++..++.|+++||.||| +.+++||||||+||+++.++ .++|+|||
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~l~dfg 155 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLH---KHNIIHNDIKLENVLYDRAKDRIYLCDYG 155 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEeCCCCeEEEecCc
Confidence 999999999999999999996543 7999999999999999999999 77899999999999999988 99999999
Q ss_pred CcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCC
Q 042216 623 LCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGK 702 (767)
Q Consensus 623 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~ 702 (767)
+++.... .....++..|+|||++.+..++.++|||||||+++||++|+.||...... ......+.... ..
T Consensus 156 ~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~--~~- 225 (267)
T PHA03390 156 LCKIIGT------PSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDE-ELDLESLLKRQ--QK- 225 (267)
T ss_pred cceecCC------CccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcc-hhhHHHHHHhh--cc-
Confidence 9875322 12235789999999999889999999999999999999999999744322 12222222211 00
Q ss_pred ccccccccccCCCChhhHHHHHHHHHHccccCCCCCCC-HHHHHH
Q 042216 703 IGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPS-MSDVVW 746 (767)
Q Consensus 703 ~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs-~~evl~ 746 (767)
....+...+..+.+++.+||+.+|.+||+ ++|+++
T Consensus 226 ---------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 226 ---------KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred ---------cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 00112245677899999999999999995 688873
No 342
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=9.8e-33 Score=294.42 Aligned_cols=257 Identities=16% Similarity=0.187 Sum_probs=186.7
Q ss_pred hccccceeeeccCcEEEEEEEecCC---CceEEEEEeCCCCCcchh-----------HHHHHHHHHhccccceeeeEeee
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGD---STPVAIKRLNPGSQQGAL-----------EFQTEIGMLSQLRYLHLVSLIGY 540 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~---~~~vAVK~l~~~~~~~~~-----------~f~~Ei~~l~~l~Hpniv~l~g~ 540 (767)
++|...++||+|+||.||+|...++ ...+|+|........... ....+...+..+.|+|+++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 5788889999999999999998766 556777764332221111 12233445566789999999997
Q ss_pred eecCC----ceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcE
Q 042216 541 CNDDG----QMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVA 616 (767)
Q Consensus 541 ~~~~~----~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ 616 (767)
+.... ..++++|++.. ++.+.+... ...++..+..|+.|++.||.||| +.+|+||||||+|||++.++.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~iiHrDiKp~Nill~~~~~~ 165 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVE-NTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIH---EHGISHGDIKPENIMVDGNNRG 165 (294)
T ss_pred eeEecCCceEEEEEEehhcc-CHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCcE
Confidence 75443 34677777644 666665432 23578889999999999999999 7889999999999999999999
Q ss_pred EEeecCCcccCCCCCC-----ccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccch-hH
Q 042216 617 KVSDFGLCKFGPNFSK-----THVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQV-NL 690 (767)
Q Consensus 617 ki~DfGla~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~-~l 690 (767)
+|+|||+++....... ........||+.|+|||+..+..++.++|||||||+++||++|+.||......... ..
T Consensus 166 ~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~ 245 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHA 245 (294)
T ss_pred EEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHH
Confidence 9999999975422111 01122346999999999999999999999999999999999999999765332211 10
Q ss_pred --HHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 042216 691 --AVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLE 749 (767)
Q Consensus 691 --~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~ 749 (767)
.++... ...+. + ....++..+.+++..|++.+|++||++.++++.|+
T Consensus 246 ~~~~~~~~-~~~~~--------~---~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 246 AKCDFIKR-LHEGK--------I---KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred hHHHHHHH-hhhhh--------h---ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 111111 11111 0 12335678999999999999999999999998763
No 343
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=2.4e-33 Score=305.72 Aligned_cols=267 Identities=21% Similarity=0.293 Sum_probs=197.5
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeecC------C
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDD------G 545 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~------~ 545 (767)
..+|...+.||+|+||.||+|+...+++.||||++... .......+.+|+.+++.++||||+++++++... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 37899999999999999999998877889999998643 222345688999999999999999999998654 2
Q ss_pred ceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcc
Q 042216 546 QMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCK 625 (767)
Q Consensus 546 ~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~ 625 (767)
..++|+||+.. +|.+++ ...+++..+..++.|++.||.||| +.+++||||||+|||++.++.+||+|||+++
T Consensus 94 ~~~lv~e~~~~-~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~ 165 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIM----GHPLSEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDFGLAR 165 (342)
T ss_pred eEEEEeccccc-CHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCCCCc
Confidence 46999999975 777665 235899999999999999999999 7789999999999999999999999999987
Q ss_pred cCCCCCCccccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHH--------HH
Q 042216 626 FGPNFSKTHVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWA--------TE 696 (767)
Q Consensus 626 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~--------~~ 696 (767)
.... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||............... ..
T Consensus 166 ~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (342)
T cd07879 166 HADA-----EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQ 240 (342)
T ss_pred CCCC-----CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 5322 1123457888999999876 46889999999999999999999999654321111000000 00
Q ss_pred HhhcCCccccccc---cccCC---CChhhHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHhHh
Q 042216 697 CYRNGKIGDIIDP---FLKGN---APPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG--LEFVFQ 753 (767)
Q Consensus 697 ~~~~~~~~~~~d~---~l~~~---~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~--L~~~~~ 753 (767)
...........+. ..... ..+....++.+++.+||+.||.+||++.+++.. ++...+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 241 KLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred HhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 0000000000000 00000 011245668899999999999999999999943 655543
No 344
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=5.3e-33 Score=290.58 Aligned_cols=244 Identities=23% Similarity=0.282 Sum_probs=190.5
Q ss_pred eeeeccCcEEEEEEEecCCCceEEEEEeCCCCC---cchhHHHHHHHHH-hccccceeeeEeeeeecCCceEEEEecCCC
Q 042216 481 LIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ---QGALEFQTEIGML-SQLRYLHLVSLIGYCNDDGQMILVYDYMAR 556 (767)
Q Consensus 481 ~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~---~~~~~f~~Ei~~l-~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~ 556 (767)
+.||+|+||.||+|.....++.||+|.+..... .....+..|..++ ...+|+|++++++++..++..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 368999999999999988788999999865421 2223345555444 455899999999999999999999999999
Q ss_pred CChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcccc
Q 042216 557 GTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVS 636 (767)
Q Consensus 557 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~ 636 (767)
++|.+++... ..+++..+..++.|++.||.||| +.+++|+||+|+||++++++.+||+|||+++.... .
T Consensus 82 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------~ 150 (260)
T cd05611 82 GDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------N 150 (260)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecccceeccc------c
Confidence 9999999653 35899999999999999999999 77899999999999999999999999999875322 2
Q ss_pred ccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCC
Q 042216 637 TQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAP 716 (767)
Q Consensus 637 ~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 716 (767)
....++..|+|||.+.+..++.++||||||++++||++|..||....... .. .....+... ......
T Consensus 151 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~~----~~~~~~~~~------~~~~~~ 217 (260)
T cd05611 151 KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA---VF----DNILSRRIN------WPEEVK 217 (260)
T ss_pred ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH---HH----HHHHhcccC------CCCccc
Confidence 23457889999999988889999999999999999999999996443221 10 111111100 011122
Q ss_pred hhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 042216 717 PVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGL 748 (767)
Q Consensus 717 ~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L 748 (767)
..++..+.+++.+||+.+|.+||++.++.+.|
T Consensus 218 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 218 EFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred ccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 24567899999999999999999776554433
No 345
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1e-33 Score=276.53 Aligned_cols=250 Identities=23% Similarity=0.364 Sum_probs=197.1
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCC-CCcchhHHHHHHHHHhcc-ccceeeeEeeeeecCCceEEEEecC
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG-SQQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
.+.+..||.|+.|.|++...+..+..+|||.+... +..+.+++++.+.++.+- .+|.||+.+||+..+...++.||.|
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM 173 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM 173 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH
Confidence 34455799999999999999998999999999765 445566777788776655 4899999999999999999999998
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
.. .+..+|++- .+++++.-+-++...+++||.||.+ .++|+|||+||+|||+|+.|++|+||||++-..- ...
T Consensus 174 s~-C~ekLlkri-k~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlv---dSk 246 (391)
T KOG0983|consen 174 ST-CAEKLLKRI-KGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV---DSK 246 (391)
T ss_pred HH-HHHHHHHHh-cCCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceee---ccc
Confidence 54 566665543 3568999899999999999999997 7899999999999999999999999999986432 233
Q ss_pred ccccccCCCcccChhhhcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccc
Q 042216 635 VSTQVKGSIGYLDPEYYRL---QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFL 711 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~---~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 711 (767)
..+...|.+.|||||.+.- ..|+.++||||||+.|+||.||+.||..-..+ -..+...+ .+ . -|.|
T Consensus 247 AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td-Fe~ltkvl----n~-e-----PP~L 315 (391)
T KOG0983|consen 247 AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD-FEVLTKVL----NE-E-----PPLL 315 (391)
T ss_pred ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc-HHHHHHHH----hc-C-----CCCC
Confidence 4456678999999999863 47889999999999999999999999653321 11111111 11 1 1223
Q ss_pred cCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 712 KGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 712 ~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.+. ...+..+++++..||++|+.+||...++++
T Consensus 316 ~~~--~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 316 PGH--MGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred Ccc--cCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 221 226778999999999999999999999885
No 346
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=9.6e-33 Score=294.69 Aligned_cols=253 Identities=25% Similarity=0.368 Sum_probs=195.1
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC-CcchhHHHHHHHHHhccc-cceeeeEeeeeecCCceEEEEe
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS-QQGALEFQTEIGMLSQLR-YLHLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~-Hpniv~l~g~~~~~~~~~lV~e 552 (767)
++|...+.||+|+||.||+|.....++.||||+++... .....++..|+.++.+++ |+||++++++|.+....+++||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 46778889999999999999998777899999987543 233456777887777765 9999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK 632 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~ 632 (767)
|+.+ +|.+++.... ..+++..+..++.|++.||+|||+ .++|+||||+|+||++++++.+||+|||++......
T Consensus 95 ~~~~-~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~--~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~-- 168 (296)
T cd06618 95 LMST-CLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS-- 168 (296)
T ss_pred ccCc-CHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh--hCCEecCCCcHHHEEEcCCCCEEECccccchhccCC--
Confidence 9854 7777664433 379999999999999999999994 358999999999999999999999999998754321
Q ss_pred ccccccccCCCcccChhhhccCC----CCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccc
Q 042216 633 THVSTQVKGSIGYLDPEYYRLQL----LTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIID 708 (767)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~~~----~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 708 (767)
.......++..|+|||.+.... ++.++||||||+++|||++|+.||...... .+........ ....
T Consensus 169 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~~~~~~~~-~~~~--- 238 (296)
T cd06618 169 -KAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-----FEVLTKILQE-EPPS--- 238 (296)
T ss_pred -CcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-----HHHHHHHhcC-CCCC---
Confidence 1122335778999999987553 788999999999999999999998542211 0111111111 1000
Q ss_pred ccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 709 PFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 709 ~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
+ .....++.++.+++.+||+.||.+||++.++++.
T Consensus 239 --~--~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 239 --L--PPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred --C--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 1111356779999999999999999999999854
No 347
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.6e-32 Score=290.41 Aligned_cols=243 Identities=23% Similarity=0.289 Sum_probs=189.8
Q ss_pred eeeccCcEEEEEEEecCCCceEEEEEeCCCCC---cchhHHHHHHH---HHhccccceeeeEeeeeecCCceEEEEecCC
Q 042216 482 IIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ---QGALEFQTEIG---MLSQLRYLHLVSLIGYCNDDGQMILVYDYMA 555 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~---~~~~~f~~Ei~---~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~ 555 (767)
+||+|+||.||++.....++.||+|.+..... .....+..|.. +++...|||++.+.+++.+.+..++||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 48999999999999987788999999865421 11222444443 3444579999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccc
Q 042216 556 RGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHV 635 (767)
Q Consensus 556 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~ 635 (767)
+|+|.+++... ..+++..+..++.|+++||.||| +.+++||||||+||+++.++.+||+|||+++..... .
T Consensus 81 g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~----~ 151 (278)
T cd05606 81 GGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK----K 151 (278)
T ss_pred CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc----C
Confidence 99999988543 46999999999999999999999 778999999999999999999999999998743221 1
Q ss_pred cccccCCCcccChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCC
Q 042216 636 STQVKGSIGYLDPEYYRLQ-LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGN 714 (767)
Q Consensus 636 ~~~~~gt~~y~aPE~~~~~-~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 714 (767)
.....|+..|+|||.+..+ .++.++||||+||++|||++|+.||............ ..... ....
T Consensus 152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~----~~~~~----------~~~~ 217 (278)
T cd05606 152 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID----RMTLT----------MAVE 217 (278)
T ss_pred CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHH----HHhhc----------cCCC
Confidence 1234689999999998754 6899999999999999999999999654322111110 00000 1112
Q ss_pred CChhhHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 042216 715 APPVCLNQFVEVAMSCVNDDRIRRP-----SMSDVVWG 747 (767)
Q Consensus 715 ~~~~~~~~l~~li~~Cl~~dp~~RP-----s~~evl~~ 747 (767)
.+...+.++.+++.+|+..+|.+|| ++.++++.
T Consensus 218 ~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 218 LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred CCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 2334567899999999999999999 99999853
No 348
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1e-32 Score=297.04 Aligned_cols=256 Identities=23% Similarity=0.224 Sum_probs=190.1
Q ss_pred CcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCChhhhhc
Q 042216 487 GFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGTLRDHLY 564 (767)
Q Consensus 487 ~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gsL~~~L~ 564 (767)
++|.||.++...+++.||||++... .......+.+|+++++.++|+||+++++++.+.+..+++|||+++|+|.+++.
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~ 91 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLK 91 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHH
Confidence 4455555555556689999998754 34455679999999999999999999999999999999999999999999997
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC-----ccccccc
Q 042216 565 NNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK-----THVSTQV 639 (767)
Q Consensus 565 ~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~-----~~~~~~~ 639 (767)
......+++.....++.|++.||.||| +.+|+||||||+||+++.++.+||+|||.+........ .......
T Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~ 168 (314)
T cd08216 92 THFPEGLPELAIAFILKDVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSS 168 (314)
T ss_pred HhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccc
Confidence 665556899999999999999999999 77899999999999999999999999998864322111 1111234
Q ss_pred cCCCcccChhhhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhh-----------cCCccc-
Q 042216 640 KGSIGYLDPEYYRL--QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYR-----------NGKIGD- 705 (767)
Q Consensus 640 ~gt~~y~aPE~~~~--~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~-----------~~~~~~- 705 (767)
.++..|+|||++.. ..++.++|||||||++|||++|+.||....... .+.+....... ......
T Consensus 169 ~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
T cd08216 169 VKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ--MLLEKVRGTVPCLLDKSTYPLYEDSMSQS 246 (314)
T ss_pred cccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhccCccccccCchhhhcCCcCcc
Confidence 56788999999876 358899999999999999999999996543221 11111000000 000000
Q ss_pred ---cccccc----cCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 706 ---IIDPFL----KGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 706 ---~~d~~l----~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
..++.. ..........++.+++.+||+.||++|||+.++++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 247 RSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred cccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 000000 011122345678899999999999999999999964
No 349
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=1.3e-32 Score=295.59 Aligned_cols=247 Identities=27% Similarity=0.356 Sum_probs=196.9
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEe
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~e 552 (767)
.|+..+.||+|+||.||+|....++..+|+|.+... ......++.+|+++++.++|+|++++.+++......++|+|
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 366667899999999999999888889999998643 22334568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK 632 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~ 632 (767)
|+. |+|.+++.... ..+++.++..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++.....
T Consensus 96 ~~~-~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~--- 167 (308)
T cd06634 96 YCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP--- 167 (308)
T ss_pred ccC-CCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEECCcccceeecC---
Confidence 997 68888775433 45899999999999999999999 77899999999999999999999999999875432
Q ss_pred ccccccccCCCcccChhhhc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccc
Q 042216 633 THVSTQVKGSIGYLDPEYYR---LQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDP 709 (767)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 709 (767)
.....++..|+|||.+. ...++.++|||||||++|||++|+.|+......+.. .. ...+...
T Consensus 168 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~------~~-~~~~~~~----- 232 (308)
T cd06634 168 ---ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL------YH-IAQNESP----- 232 (308)
T ss_pred ---cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHH------HH-HhhcCCC-----
Confidence 12345788999999974 356888999999999999999999998554321111 11 1111110
Q ss_pred cccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 042216 710 FLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGL 748 (767)
Q Consensus 710 ~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L 748 (767)
......+...+.+++.+||+.+|.+||++.++++..
T Consensus 233 ---~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 233 ---ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred ---CcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence 011224556788999999999999999999998653
No 350
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=6.1e-33 Score=302.92 Aligned_cols=272 Identities=22% Similarity=0.257 Sum_probs=203.6
Q ss_pred cccCHHHHHHHhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC--CcchhHHHHHHHHHhccccceeeeEeee
Q 042216 463 TQFSISEIKEATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS--QQGALEFQTEIGMLSQLRYLHLVSLIGY 540 (767)
Q Consensus 463 ~~~~~~ei~~~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~Hpniv~l~g~ 540 (767)
++....++...+++|...+.||+|+||.||+|....+++.||+|++.... ....+.+.+|++++.+++||||++++++
T Consensus 5 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~ 84 (345)
T cd07877 5 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 84 (345)
T ss_pred hhhHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeee
Confidence 34556677888899999999999999999999988778899999987532 2234568889999999999999999998
Q ss_pred eecC------CceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCC
Q 042216 541 CNDD------GQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEW 614 (767)
Q Consensus 541 ~~~~------~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~ 614 (767)
+... ...+++++++ +++|.+++.. ..+++..+..++.|+++||+||| +.+|+||||||+||++++++
T Consensus 85 ~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~ 157 (345)
T cd07877 85 FTPARSLEEFNDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 157 (345)
T ss_pred eeecccccccccEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEcCCC
Confidence 7533 3467888877 6799888743 24899999999999999999999 78899999999999999999
Q ss_pred cEEEeecCCcccCCCCCCccccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHH
Q 042216 615 VAKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVW 693 (767)
Q Consensus 615 ~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~ 693 (767)
.+||+|||+++.... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||..............
T Consensus 158 ~~kl~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~ 232 (345)
T cd07877 158 ELKILDFGLARHTDD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 232 (345)
T ss_pred CEEEecccccccccc-----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 999999999875322 1233457889999998866 5688999999999999999999999954432211110000
Q ss_pred --------HHHHhhcCC-------ccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 694 --------ATECYRNGK-------IGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 694 --------~~~~~~~~~-------~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
....+.... +........ .........++.+++.+|++.||.+||++.+++..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 233 LVGTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HhCCCCHHHHhhcccHhHHHHHHHhcccCCcch-hhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 000000000 000000000 00011235678899999999999999999999854
No 351
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.6e-33 Score=316.43 Aligned_cols=269 Identities=19% Similarity=0.219 Sum_probs=188.8
Q ss_pred HhhccccceeeeccCcEEEEEEEecCCCc-eEEEE------------------EeCCCCCcchhHHHHHHHHHhccccce
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLNGDST-PVAIK------------------RLNPGSQQGALEFQTEIGMLSQLRYLH 533 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~-~vAVK------------------~l~~~~~~~~~~f~~Ei~~l~~l~Hpn 533 (767)
...+|...+.||+|+||+||++..+.... ..++| .+. ........+.+|+++|.+++|||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCCC
Confidence 45789999999999999999987643221 11111 111 11223456889999999999999
Q ss_pred eeeEeeeeecCCceEEEEecCCCCChhhhhccCC---CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEE
Q 042216 534 LVSLIGYCNDDGQMILVYDYMARGTLRDHLYNND---NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILL 610 (767)
Q Consensus 534 iv~l~g~~~~~~~~~lV~ey~~~gsL~~~L~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl 610 (767)
|+++++++...+..++|+|++. ++|.+++.... .......+...++.|++.||.||| +++|+||||||+|||+
T Consensus 225 Iv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH---~~gIiHrDLKP~NILl 300 (501)
T PHA03210 225 ILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH---DKKLIHRDIKLENIFL 300 (501)
T ss_pred cCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEE
Confidence 9999999999999999999985 47877775432 122345667789999999999999 7889999999999999
Q ss_pred CCCCcEEEeecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCC-CCCCCCccchh
Q 042216 611 DEEWVAKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPP-ILRTGDKKQVN 689 (767)
Q Consensus 611 d~~~~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P-~~~~~~~~~~~ 689 (767)
+.++.+||+|||+++...... ........||..|+|||++.+..++.++|||||||++|||++|..+ +..........
T Consensus 301 ~~~~~vkL~DFGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~ 379 (501)
T PHA03210 301 NCDGKIVLGDFGTAMPFEKER-EAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQ 379 (501)
T ss_pred CCCCCEEEEeCCCceecCccc-ccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHH
Confidence 999999999999998653321 1122345799999999999999999999999999999999998754 43322221122
Q ss_pred HHHHHHHHh-hcCCc-------ccccccc-cc---CCC-----ChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 690 LAVWATECY-RNGKI-------GDIIDPF-LK---GNA-----PPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 690 l~~~~~~~~-~~~~~-------~~~~d~~-l~---~~~-----~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
+.......- ..... .+.++.. +. ... .......+.+++.+||+.||.+|||+.|++..
T Consensus 380 ~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 380 LLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 222111100 00000 0000000 00 000 01123457788999999999999999999853
No 352
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=5.9e-33 Score=293.00 Aligned_cols=250 Identities=24% Similarity=0.317 Sum_probs=203.5
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccc-cceeeeEeeeeecCCceEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLR-YLHLVSLIGYCNDDGQMILV 550 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~-Hpniv~l~g~~~~~~~~~lV 550 (767)
++|...+.||+|+||.||+++...+++.+|+|++... .......+.+|++++.+++ |+||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 3678888999999999999999888899999998653 2233456889999999998 99999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCC
Q 042216 551 YDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNF 630 (767)
Q Consensus 551 ~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~ 630 (767)
|||+++++|.+++.+. ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~ 155 (280)
T cd05581 81 LEYAPNGELLQYIRKY--GSLDEKCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPN 155 (280)
T ss_pred EcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence 9999999999999654 36999999999999999999999 788999999999999999999999999998754322
Q ss_pred CCc------------------cccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHH
Q 042216 631 SKT------------------HVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAV 692 (767)
Q Consensus 631 ~~~------------------~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~ 692 (767)
... .......++..|+|||......++.++||||||++++|+++|+.||....... ...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~~ 232 (280)
T cd05581 156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL---TFQ 232 (280)
T ss_pred cccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH---HHH
Confidence 210 11223457889999999988889999999999999999999999996554211 111
Q ss_pred HHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCH----HHHHH
Q 042216 693 WATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSM----SDVVW 746 (767)
Q Consensus 693 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~----~evl~ 746 (767)
... . .....+...++.+.+++.+||+.+|.+||++ ++++.
T Consensus 233 ---~~~-~----------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 233 ---KIL-K----------LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred ---HHH-h----------cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 000 0 1122334446778999999999999999999 66653
No 353
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.5e-32 Score=298.65 Aligned_cols=262 Identities=19% Similarity=0.233 Sum_probs=196.5
Q ss_pred hcccc-ceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcc--------------hhHHHHHHHHHhccccceeeeEee
Q 042216 475 KDFNN-LLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQG--------------ALEFQTEIGMLSQLRYLHLVSLIG 539 (767)
Q Consensus 475 ~~f~~-~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~--------------~~~f~~Ei~~l~~l~Hpniv~l~g 539 (767)
++|.. .+.||+|+||.||+|.....++.||||++....... ...+.+|+++++.++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 34443 356999999999999988788999999986442211 124778999999999999999999
Q ss_pred eeecCCceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEe
Q 042216 540 YCNDDGQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVS 619 (767)
Q Consensus 540 ~~~~~~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~ 619 (767)
++..++..++||||+. |+|.+++... ..+++.....++.|++.||.||| +.+++|+||||+||+++.++.+||+
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH---~~~i~H~dl~~~nill~~~~~~kl~ 161 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRK--IRLTESQVKCILLQILNGLNVLH---KWYFMHRDLSPANIFINSKGICKIA 161 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHeEECCCCCEEEC
Confidence 9999999999999997 5999998543 45899999999999999999999 7889999999999999999999999
Q ss_pred ecCCcccCCCCC------------CccccccccCCCcccChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCcc
Q 042216 620 DFGLCKFGPNFS------------KTHVSTQVKGSIGYLDPEYYRLQ-LLTEKSDVYSFGVVLLEVLCARPPILRTGDKK 686 (767)
Q Consensus 620 DfGla~~~~~~~------------~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~ 686 (767)
|||+++...... .........++..|+|||.+.+. .++.++|||||||++|||++|++||......+
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~ 241 (335)
T PTZ00024 162 DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID 241 (335)
T ss_pred CccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 999987543100 01111223467889999998764 47899999999999999999999996554322
Q ss_pred chhHHHHHHHHhhcCCcc---cc------------ccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 687 QVNLAVWATECYRNGKIG---DI------------IDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 687 ~~~l~~~~~~~~~~~~~~---~~------------~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
. .............. .. ..+... .....++.++.+++.+||+.+|++||+++|++.
T Consensus 242 ~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 242 Q---LGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLK-TIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred H---HHHHHHHhCCCchhhCcchhhcccccccCcCCcccHH-HhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 1 11111111110000 00 000000 011234567899999999999999999999985
No 354
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=3.3e-32 Score=293.04 Aligned_cols=245 Identities=26% Similarity=0.369 Sum_probs=195.0
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC---cchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ---QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
|...+.||+|+||+||+|+...+++.+++|++..... .....+.+|+++++.++|||++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 5556679999999999999988889999999864322 2335688999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
+. |+|.+++.... .++++.++..++.|++.+|.||| +.+++|+||+|+||++++++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~---- 173 (313)
T cd06633 103 CL-GSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP---- 173 (313)
T ss_pred CC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeecCCCcccCC----
Confidence 96 58888775433 46899999999999999999999 77899999999999999999999999999864221
Q ss_pred cccccccCCCcccChhhhc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccccc
Q 042216 634 HVSTQVKGSIGYLDPEYYR---LQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPF 710 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~---~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 710 (767)
.....|+..|+|||++. ...++.++|||||||++|||++|..|+......... ...... ....
T Consensus 174 --~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~------~~~~~~-~~~~----- 239 (313)
T cd06633 174 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL------YHIAQN-DSPT----- 239 (313)
T ss_pred --CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH------HHHHhc-CCCC-----
Confidence 12345788999999984 456889999999999999999999998654321111 111111 1111
Q ss_pred ccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 711 LKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 711 l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
......+..+.+++.+||+.+|.+||++.+++..
T Consensus 240 ---~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 240 ---LQSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred ---CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1112234568899999999999999999999853
No 355
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=5.4e-33 Score=301.33 Aligned_cols=268 Identities=23% Similarity=0.289 Sum_probs=204.4
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC--CcchhHHHHHHHHHhccccceeeeEeeeeecCC-----ceE
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS--QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDG-----QMI 548 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~-----~~~ 548 (767)
+|...+.||+|++|.||+|+....++.+|||++.... ....+.+.+|+++++.++|+||+++.+++...+ ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4677789999999999999998778899999987643 344567899999999999999999999987765 789
Q ss_pred EEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCC
Q 042216 549 LVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGP 628 (767)
Q Consensus 549 lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~ 628 (767)
++|||+++ +|.+++.+. ..+++..+..++.+++.||.||| +.+|+|+||||+|||++.++.++|+|||++....
T Consensus 81 lv~e~~~~-~l~~~l~~~--~~l~~~~~~~i~~~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 81 IVTELMET-DLHKVIKSP--QPLTDDHIQYFLYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARGVD 154 (330)
T ss_pred EEecchhh-hHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccCceEeec
Confidence 99999984 899888543 37999999999999999999999 7889999999999999999999999999988643
Q ss_pred CCCCc-cccccccCCCcccChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhc------
Q 042216 629 NFSKT-HVSTQVKGSIGYLDPEYYRLQ-LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRN------ 700 (767)
Q Consensus 629 ~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~------ 700 (767)
..... .......++..|+|||.+.+. .++.++|+||||+++++|++|++||......+.... .......
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~---i~~~~~~~~~~~~ 231 (330)
T cd07834 155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNL---IVEVLGTPSEEDL 231 (330)
T ss_pred ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHH---HHHhcCCCChhHh
Confidence 32210 112234578889999999887 899999999999999999999999966543221111 0110000
Q ss_pred -----CCcccccccc-c-----cCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHhH
Q 042216 701 -----GKIGDIIDPF-L-----KGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG--LEFVF 752 (767)
Q Consensus 701 -----~~~~~~~d~~-l-----~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~--L~~~~ 752 (767)
....+.+... . .....+..+..+.+++.+||+.+|.+||++.+++.. ++...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~ 296 (330)
T cd07834 232 KFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH 296 (330)
T ss_pred hhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence 0000000000 0 000112245678999999999999999999999974 44443
No 356
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=2.2e-32 Score=296.30 Aligned_cols=265 Identities=22% Similarity=0.251 Sum_probs=199.9
Q ss_pred HHHHhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeec-CCc
Q 042216 470 IKEATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCND-DGQ 546 (767)
Q Consensus 470 i~~~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~-~~~ 546 (767)
+...+++|+..+.||+|+||.||++....+++.||+|++... .....+.+.+|++++.+++|||++++.+++.. ...
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 345678899999999999999999999888899999988643 22334568899999999999999999998865 567
Q ss_pred eEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCccc
Q 042216 547 MILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKF 626 (767)
Q Consensus 547 ~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~ 626 (767)
.++++||+. ++|.+++.. .++++.....++.|+++||.||| +.+|+|+||+|+|||+++++.+||+|||+++.
T Consensus 85 ~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~ 157 (328)
T cd07856 85 IYFVTELLG-TDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLARI 157 (328)
T ss_pred EEEEeehhc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEeECCCCCEEeCccccccc
Confidence 899999994 589888753 34788889999999999999999 78899999999999999999999999999874
Q ss_pred CCCCCCccccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccch-hHHH--------HHHH
Q 042216 627 GPNFSKTHVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQV-NLAV--------WATE 696 (767)
Q Consensus 627 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~-~l~~--------~~~~ 696 (767)
... ......++..|+|||.+.+ ..++.++|||||||+++||++|+.||......... .+.+ +...
T Consensus 158 ~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (328)
T cd07856 158 QDP-----QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINT 232 (328)
T ss_pred cCC-----CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 322 1123356788999998765 57899999999999999999999999544321100 0000 0000
Q ss_pred HhhcCCccccccc-cccCCCC-----hhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 697 CYRNGKIGDIIDP-FLKGNAP-----PVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 697 ~~~~~~~~~~~d~-~l~~~~~-----~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
.. .....+++.. ......+ +....++.+++.+||+.+|++||++.+++..
T Consensus 233 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 233 IC-SENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred cc-chhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 0000000000 0001111 2245788999999999999999999999754
No 357
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-33 Score=282.08 Aligned_cols=242 Identities=28% Similarity=0.353 Sum_probs=203.0
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchh---HHHHHHHHHhccccceeeeEeeeeecCCceEEE
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGAL---EFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILV 550 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~---~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV 550 (767)
.++|+.+++||+|.||+|-+++-+..++.+|+|++++..-.... --..|-++|+..+||.+..|--.+...+.+++|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 46899999999999999999999999999999999876333333 346789999999999999998888999999999
Q ss_pred EecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCC
Q 042216 551 YDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNF 630 (767)
Q Consensus 551 ~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~ 630 (767)
|||..+|.|.-||.+. ..+++....-.-..|+.||.||| +++||.||||.+|.|+|.+|.+||+|||||+..-
T Consensus 247 MeyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I-- 319 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLH---SRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI-- 319 (516)
T ss_pred EEEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhh---hCCeeeeechhhhheeccCCceEeeecccchhcc--
Confidence 9999999999999654 34777777778889999999999 7889999999999999999999999999998643
Q ss_pred CCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccccc
Q 042216 631 SKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPF 710 (767)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 710 (767)
.........+||+.|+|||++....|....|.|.+||++|||+||+.||...+.+.--.|+. .+ +
T Consensus 320 ~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl--~e--------d----- 384 (516)
T KOG0690|consen 320 KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELIL--ME--------D----- 384 (516)
T ss_pred cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHH--hh--------h-----
Confidence 33445667899999999999999999999999999999999999999997665432111111 00 0
Q ss_pred ccCCCChhhHHHHHHHHHHccccCCCCCC
Q 042216 711 LKGNAPPVCLNQFVEVAMSCVNDDRIRRP 739 (767)
Q Consensus 711 l~~~~~~~~~~~l~~li~~Cl~~dp~~RP 739 (767)
-.+|...+.+...|+...|..||.+|.
T Consensus 385 --~kFPr~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 385 --LKFPRTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred --ccCCccCCHHHHHHHHHHhhcChHhhc
Confidence 124555667788899999999999996
No 358
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1.8e-32 Score=289.69 Aligned_cols=259 Identities=22% Similarity=0.290 Sum_probs=199.0
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC--CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS--QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
|+..+.||+|++|.||+|+....++.+|+|.+.... ......+..|++++++++|+|++++++++.+.+..++|+||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 345568999999999999998888999999997653 333456889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
+ ++|.+++.+.. ..+++.++..++.+++.||.||| ..+|+|+||+|+||++++++.+||+|||+++.......
T Consensus 81 ~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-- 153 (282)
T cd07829 81 D-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-- 153 (282)
T ss_pred C-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc--
Confidence 8 59999997643 35899999999999999999999 67899999999999999999999999999875432211
Q ss_pred ccccccCCCcccChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhh--------------
Q 042216 635 VSTQVKGSIGYLDPEYYRLQ-LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYR-------------- 699 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~-------------- 699 (767)
......++..|+|||.+... .++.++|||||||+++||++|++||......+. .........
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07829 154 TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQ---LFKIFQILGTPTEESWPGVTKLP 230 (282)
T ss_pred ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH---HHHHHHHhCCCcHHHHHhhcccc
Confidence 12233456789999998766 889999999999999999999999865432211 111111000
Q ss_pred --cCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 700 --NGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 700 --~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
............... .+.....+.+++.+||+.+|++||++.+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 231 DYKPTFPKFPPKDLEKV-LPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred cccccccccCccchHHh-cccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 000000000000001 1122567899999999999999999999975
No 359
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=2.7e-32 Score=289.87 Aligned_cols=257 Identities=25% Similarity=0.287 Sum_probs=200.7
Q ss_pred ccccceeeeccCcEEEEEEEec---CCCceEEEEEeCCCC----CcchhHHHHHHHHHhcc-ccceeeeEeeeeecCCce
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLN---GDSTPVAIKRLNPGS----QQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDGQM 547 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~---~~~~~vAVK~l~~~~----~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~ 547 (767)
+|+..+.||+|++|.||+++.. ..++.+|||.+.... ......+.+|++++.++ +||||+++++.+..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 3667789999999999999864 245789999986432 22345688999999999 599999999999989999
Q ss_pred EEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccC
Q 042216 548 ILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFG 627 (767)
Q Consensus 548 ~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~ 627 (767)
++||||+++|+|.+++... ..+++..+..++.|+++||.||| ..+++|+||||+||+++.++.++|+|||+++..
T Consensus 81 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 155 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (288)
T ss_pred EEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEEECcccccc
Confidence 9999999999999998643 35889999999999999999999 788999999999999999999999999998754
Q ss_pred CCCCCccccccccCCCcccChhhhccCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccc
Q 042216 628 PNFSKTHVSTQVKGSIGYLDPEYYRLQL--LTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGD 705 (767)
Q Consensus 628 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~ 705 (767)
.... ........++..|+|||.+.+.. .+.++||||||++++||++|..||...... .............
T Consensus 156 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--~~~~~~~~~~~~~----- 227 (288)
T cd05583 156 LAEE-EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ--NSQSEISRRILKS----- 227 (288)
T ss_pred cccc-ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc--chHHHHHHHHHcc-----
Confidence 3221 11122345788999999987654 788999999999999999999998543221 1111111111111
Q ss_pred cccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 042216 706 IIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFV 751 (767)
Q Consensus 706 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~ 751 (767)
....+......+.+++.+||+.+|++|||+.++.+.|+..
T Consensus 228 ------~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 228 ------KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred ------CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 1122334556788999999999999999998887776543
No 360
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.8e-32 Score=294.16 Aligned_cols=265 Identities=24% Similarity=0.306 Sum_probs=195.9
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC--cchhHHHHHHHHHhccccceeeeEeeeeecC-------
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ--QGALEFQTEIGMLSQLRYLHLVSLIGYCNDD------- 544 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~--~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~------- 544 (767)
.++|...+.||+|+||.||+|+...+++.+|+|++..... .....+.+|++++++++||||+++++++.+.
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 4689999999999999999999988888999998864422 2234578899999999999999999987543
Q ss_pred -CceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCC
Q 042216 545 -GQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGL 623 (767)
Q Consensus 545 -~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGl 623 (767)
..+++|+||+.. +|...+... ...+++.++..++.|+++||.||| +.+|+|+||||+|||+++++.+||+|||+
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~ 161 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENP-SVKLTESQIKCYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGILKIADFGL 161 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECcCcc
Confidence 346999999975 777776543 346999999999999999999999 78899999999999999999999999999
Q ss_pred cccCCCCCCc---------cccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHH
Q 042216 624 CKFGPNFSKT---------HVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVW 693 (767)
Q Consensus 624 a~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~ 693 (767)
++........ ...+...++..|+|||.+.+ ..++.++|||||||++|||++|++||...........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~--- 238 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHL--- 238 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHH---
Confidence 8754322111 11123356788999998765 4588999999999999999999999965433211111
Q ss_pred HHHHhhc---------CCccccccccccCCCC-------hhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 694 ATECYRN---------GKIGDIIDPFLKGNAP-------PVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 694 ~~~~~~~---------~~~~~~~d~~l~~~~~-------~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
....... ..+....+.......+ ......+.+++.+||+.||.+|||+.|++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 239 IFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 1110000 0000000000000011 122356889999999999999999999874
No 361
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=2.7e-32 Score=285.17 Aligned_cols=249 Identities=22% Similarity=0.329 Sum_probs=196.1
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC-----CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEE
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG-----SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILV 550 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~-----~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV 550 (767)
+|...+.||+|+||.||++.....+..+++|.++.. ......++..|+.++++++|||++++++++.+.+..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 366677899999999999988766556666665432 222344577899999999999999999999999999999
Q ss_pred EecCCCCChhhhhcc--CCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCC
Q 042216 551 YDYMARGTLRDHLYN--NDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGP 628 (767)
Q Consensus 551 ~ey~~~gsL~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~ 628 (767)
+||+++++|.+++.. .....+++.+++.++.|++.||.||| +.+++|+||||+||++++ +.+||+|||+++...
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH---HcCccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999998864 23456999999999999999999999 788999999999999986 469999999987543
Q ss_pred CCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccc
Q 042216 629 NFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIID 708 (767)
Q Consensus 629 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 708 (767)
.. ........++..|+|||.+....++.++|+||||+++|+|++|+.||..... ....... ..+.
T Consensus 157 ~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~------~~~~~~~-~~~~------ 221 (260)
T cd08222 157 GS--CDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF------LSVVLRI-VEGP------ 221 (260)
T ss_pred CC--cccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH------HHHHHHH-HcCC------
Confidence 21 1122334578899999999888899999999999999999999999853321 1111111 1111
Q ss_pred ccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 709 PFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 709 ~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
....+..++.++.+++.+||+.+|++||++.|+++
T Consensus 222 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 222 ---TPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred ---CCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 11123455678899999999999999999999975
No 362
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=282.29 Aligned_cols=254 Identities=25% Similarity=0.318 Sum_probs=198.7
Q ss_pred ccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC-cchhHHHHHHHHHhcc-ccceeeeEeeeeecCCceEEEEecCC
Q 042216 478 NNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ-QGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDGQMILVYDYMA 555 (767)
Q Consensus 478 ~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~lV~ey~~ 555 (767)
+.+..||.|.||+|+|-.++..++.+|||+++.... .+.++++.|.+...+- ++||||+++|.+..++..|+.||.|+
T Consensus 67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd 146 (361)
T KOG1006|consen 67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD 146 (361)
T ss_pred HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh
Confidence 344579999999999999999999999999986643 5566788898766655 79999999999999999999999997
Q ss_pred CCChhhhh---ccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC
Q 042216 556 RGTLRDHL---YNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK 632 (767)
Q Consensus 556 ~gsL~~~L---~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~ 632 (767)
- ||+.+. +...+..+++.-+-+|....+.||.||-+ ...|||||+||+|||+|..|.+||||||++-... .
T Consensus 147 ~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv---~ 220 (361)
T KOG1006|consen 147 I-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLV---D 220 (361)
T ss_pred h-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHH---H
Confidence 6 776554 33345568899889999999999999997 6789999999999999999999999999986432 2
Q ss_pred ccccccccCCCcccChhhhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccccc
Q 042216 633 THVSTQVKGSIGYLDPEYYRL--QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPF 710 (767)
Q Consensus 633 ~~~~~~~~gt~~y~aPE~~~~--~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 710 (767)
+...+.-.|...|||||.+.. ..|+.+|||||+|++|+|+.||+.|+..-.. ..+.+.. +..|....+.
T Consensus 221 SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s-----vfeql~~-Vv~gdpp~l~--- 291 (361)
T KOG1006|consen 221 SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS-----VFEQLCQ-VVIGDPPILL--- 291 (361)
T ss_pred HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH-----HHHHHHH-HHcCCCCeec---
Confidence 333455678889999999863 3589999999999999999999999954322 1111111 1222222111
Q ss_pred ccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 711 LKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 711 l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
...........++.++..|+.+|..+||+..+++++
T Consensus 292 -~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 292 -FDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred -CcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 111123456789999999999999999999998854
No 363
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1e-32 Score=301.87 Aligned_cols=270 Identities=26% Similarity=0.351 Sum_probs=199.4
Q ss_pred ccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC-CcchhHHHHHHHHHhccccceeeeEeeeeecC------CceEEE
Q 042216 478 NNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS-QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDD------GQMILV 550 (767)
Q Consensus 478 ~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~------~~~~lV 550 (767)
...+.||+|+||.||+|+++..|..||||..+... ....+...+|+++|++|+|+|||++++.-++. ....+|
T Consensus 16 ~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlv 95 (732)
T KOG4250|consen 16 EMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLV 95 (732)
T ss_pred eehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEE
Confidence 33447999999999999999999999999997653 34455678999999999999999999986544 367899
Q ss_pred EecCCCCChhhhhccCC-CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEEC--C--CCcEEEeecCCcc
Q 042216 551 YDYMARGTLRDHLYNND-NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLD--E--EWVAKVSDFGLCK 625 (767)
Q Consensus 551 ~ey~~~gsL~~~L~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld--~--~~~~ki~DfGla~ 625 (767)
||||.+|||+..|.+.. ...|++.+.+.+..+++.||.||| .++|+||||||.||++- + ....||+|||.|+
T Consensus 96 mEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Ar 172 (732)
T KOG4250|consen 96 MEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAR 172 (732)
T ss_pred EeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeecccccc
Confidence 99999999999997643 457999999999999999999999 78899999999999983 3 3356999999999
Q ss_pred cCCCCCCccccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcc
Q 042216 626 FGPNFSKTHVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIG 704 (767)
Q Consensus 626 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~ 704 (767)
..+... ..+...||..|++||.+.. +.|+...|.|||||++||++||..||..........-..|..-.-....+.
T Consensus 173 el~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~ 249 (732)
T KOG4250|consen 173 ELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVA 249 (732)
T ss_pred cCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCcee
Confidence 765432 4567789999999999984 889999999999999999999999996654432211122222111111111
Q ss_pred ccccccccCC------CC------hhhHHHHHHHHHHccccCCCCCC--CHHHHHHHHHHhHh
Q 042216 705 DIIDPFLKGN------AP------PVCLNQFVEVAMSCVNDDRIRRP--SMSDVVWGLEFVFQ 753 (767)
Q Consensus 705 ~~~d~~l~~~------~~------~~~~~~l~~li~~Cl~~dp~~RP--s~~evl~~L~~~~~ 753 (767)
-..++...++ .| ......+-..+..++..+|++|- ...+.-..+..++.
T Consensus 250 i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~ 312 (732)
T KOG4250|consen 250 IGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILN 312 (732)
T ss_pred EeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHh
Confidence 1112211111 11 12233445566666667777776 55555555555543
No 364
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.4e-32 Score=299.63 Aligned_cols=265 Identities=19% Similarity=0.251 Sum_probs=195.7
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecC----------
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDD---------- 544 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~---------- 544 (767)
.+|...+.||.|+||.||+|.....++.||+|++........+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 5788889999999999999999888899999998766556667789999999999999999999876543
Q ss_pred ----CceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEEC-CCCcEEEe
Q 042216 545 ----GQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLD-EEWVAKVS 619 (767)
Q Consensus 545 ----~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld-~~~~~ki~ 619 (767)
...++|+||++ ++|.+++.. ..+++.....++.|++.||.||| +.+|+||||||+||+++ +++.+||+
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH---~~givH~dikp~Nili~~~~~~~kl~ 157 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANVFINTEDLVLKIG 157 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCceEEEC
Confidence 35789999997 589888743 25889999999999999999999 77899999999999997 56678999
Q ss_pred ecCCcccCCCCCCc-cccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHH--
Q 042216 620 DFGLCKFGPNFSKT-HVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWAT-- 695 (767)
Q Consensus 620 DfGla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~-- 695 (767)
|||+++........ .......++..|+|||.+.. ..++.++|||||||++|||++|+.||......+.........
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~ 237 (342)
T cd07854 158 DFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPV 237 (342)
T ss_pred CcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 99998754221111 11123357889999998754 568889999999999999999999996543321111100000
Q ss_pred ------HHhhcCCccccccccccC-----CCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 696 ------ECYRNGKIGDIIDPFLKG-----NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 696 ------~~~~~~~~~~~~d~~l~~-----~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.................. ...+....++.+++.+||+.||.+|||+.|++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 238 VREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred CChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 000000000000000000 001224567889999999999999999999984
No 365
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=6.7e-32 Score=287.17 Aligned_cols=252 Identities=24% Similarity=0.286 Sum_probs=196.7
Q ss_pred ccccceeeeccCcEEEEEEEec---CCCceEEEEEeCCCC----CcchhHHHHHHHHHhcc-ccceeeeEeeeeecCCce
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLN---GDSTPVAIKRLNPGS----QQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDGQM 547 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~---~~~~~vAVK~l~~~~----~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~ 547 (767)
+|+..+.||+|+||.||++... .++..||+|++.... ....+.+.+|++++.++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 3667789999999999999874 246789999986532 22345678899999999 589999999999988999
Q ss_pred EEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccC
Q 042216 548 ILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFG 627 (767)
Q Consensus 548 ~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~ 627 (767)
++|+||+++++|.+++... ..+++..+..++.|++.||.||| +.+++||||||+|||+++++.+||+|||+++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 155 (290)
T cd05613 81 HLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 155 (290)
T ss_pred EEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEECCCCCEEEeeCccceec
Confidence 9999999999999999654 45889999999999999999999 788999999999999999999999999998754
Q ss_pred CCCCCccccccccCCCcccChhhhccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccc
Q 042216 628 PNFSKTHVSTQVKGSIGYLDPEYYRLQ--LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGD 705 (767)
Q Consensus 628 ~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~ 705 (767)
.... ........|+..|+|||.+... .++.++||||||+++|||++|+.||...... .....+.......
T Consensus 156 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~--~~~~~~~~~~~~~----- 227 (290)
T cd05613 156 HEDE-VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK--NSQAEISRRILKS----- 227 (290)
T ss_pred cccc-ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc--ccHHHHHHHhhcc-----
Confidence 3211 1112234588899999998753 4678999999999999999999998643221 1112222211111
Q ss_pred cccccccCCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 042216 706 IIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRP-----SMSDVVW 746 (767)
Q Consensus 706 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RP-----s~~evl~ 746 (767)
....+......+.+++.+||+.+|.+|| ++.+++.
T Consensus 228 ------~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 228 ------EPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred ------CCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 1122344567788999999999999997 6677764
No 366
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-32 Score=297.36 Aligned_cols=247 Identities=24% Similarity=0.321 Sum_probs=207.3
Q ss_pred HhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC--cchhHHHHHHHHHhccccceeeeEeeeeecCCceEEE
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ--QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILV 550 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~--~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV 550 (767)
....|.....||+|.|++|.++++...+..||||.+.+... ...+.+.+|+++|..|.|||||+++.+......+|+|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 35678888899999999999999998899999999976632 3345689999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCC
Q 042216 551 YDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNF 630 (767)
Q Consensus 551 ~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~ 630 (767)
|||+.+|.+++||.++.. +.......++.|+..+++||| ++.|+|||||++||||+.+.++||+|||++..+.
T Consensus 134 ~eya~~ge~~~yl~~~gr--~~e~~ar~~F~q~vsaveYcH---~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~-- 206 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHGR--MKEKEARAKFRQIVSAVEYCH---SKNIVHRDLKAENILLDENMNIKIADFGFSTFFD-- 206 (596)
T ss_pred EEeccCchhHHHHHhccc--chhhhhhhhhHHHHHHHHHHh---hcceeccccchhhcccccccceeeeccccceeec--
Confidence 999999999999976643 666888899999999999999 7889999999999999999999999999998653
Q ss_pred CCccccccccCCCcccChhhhccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccc
Q 042216 631 SKTHVSTQVKGSIGYLDPEYYRLQLL-TEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDP 709 (767)
Q Consensus 631 ~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 709 (767)
........+|++.|.|||++.+..+ .+++|+||+|++||-|++|..||.+..-. ++-++
T Consensus 207 -~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk-------------------~Lr~r 266 (596)
T KOG0586|consen 207 -YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK-------------------ELRPR 266 (596)
T ss_pred -ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccc-------------------cccch
Confidence 3445667899999999999998765 57899999999999999999999654321 11122
Q ss_pred cccCC--CChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 710 FLKGN--APPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 710 ~l~~~--~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.+++. .+--...++.+++++++..+|.+|++++++.+
T Consensus 267 vl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 267 VLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred heeeeecccceeechhHHHHHHhhccCccccCCHHHhhh
Confidence 22222 12223456778999999999999999999974
No 367
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=8.5e-32 Score=293.67 Aligned_cols=263 Identities=22% Similarity=0.294 Sum_probs=197.9
Q ss_pred HHHhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC--CcchhHHHHHHHHHhccccceeeeEeeeeecCC---
Q 042216 471 KEATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS--QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDG--- 545 (767)
Q Consensus 471 ~~~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~--- 545 (767)
....++|+..+.||+|+||.||++....+++.||||++.... ......+.+|++++++++||||+++++++....
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 11 WEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD 90 (343)
T ss_pred hccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence 345678999999999999999999988888999999986432 223446889999999999999999999986553
Q ss_pred ---ceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecC
Q 042216 546 ---QMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFG 622 (767)
Q Consensus 546 ---~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfG 622 (767)
..++||||+ +++|.+++.. ..+++..+..++.|+++||.||| +.+|+||||||+||+++.++.+||+|||
T Consensus 91 ~~~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH---~~gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 91 RFHDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred ccceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecc
Confidence 458999999 6699888753 35899999999999999999999 7889999999999999999999999999
Q ss_pred CcccCCCCCCccccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchh-HH--------H
Q 042216 623 LCKFGPNFSKTHVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVN-LA--------V 692 (767)
Q Consensus 623 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~-l~--------~ 692 (767)
++..... ......++..|+|||.+.+ ..++.++|+|||||++++|++|+.||.......... .. .
T Consensus 164 ~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 238 (343)
T cd07880 164 LARQTDS-----EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKE 238 (343)
T ss_pred ccccccc-----CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence 9875422 1123457889999999876 468899999999999999999999996543211100 00 0
Q ss_pred HHHHHhhcCCcccccc--cccc----CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 693 WATECYRNGKIGDIID--PFLK----GNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 693 ~~~~~~~~~~~~~~~d--~~l~----~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
+.... .......... +... ......+...+.+++.+|++.||.+|||+.+++.
T Consensus 239 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 239 FVQKL-QSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HHHhh-cchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000 0000000000 0000 0011234556889999999999999999999983
No 368
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=4.9e-32 Score=294.25 Aligned_cols=261 Identities=20% Similarity=0.222 Sum_probs=192.7
Q ss_pred ccccceeeeccCcEEEEEEEecCC--CceEEEEEeCCC--CCcchhHHHHHHHHHhcc-ccceeeeEeeeeecC----Cc
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGD--STPVAIKRLNPG--SQQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDD----GQ 546 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~--~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~----~~ 546 (767)
+|...+.||+|+||.||++..... ++.+|+|++... .....+.+.+|+++++++ +||||+++++.+... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 467778999999999999999876 789999998643 222345678899999999 599999999975432 45
Q ss_pred eEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCccc
Q 042216 547 MILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKF 626 (767)
Q Consensus 547 ~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~ 626 (767)
.++++||+. ++|.+++.. ...+++..+..++.|++.||.||| ..+|+||||||+|||+++++.+||+|||+++.
T Consensus 81 ~~~~~e~~~-~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~ 154 (332)
T cd07857 81 LYLYEELME-ADLHQIIRS--GQPLTDAHFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGLARG 154 (332)
T ss_pred EEEEEeccc-CCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence 788899886 589998854 346899999999999999999999 78899999999999999999999999999875
Q ss_pred CCCCCCc--cccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhh----
Q 042216 627 GPNFSKT--HVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYR---- 699 (767)
Q Consensus 627 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~---- 699 (767)
....... .......|+..|+|||++.+ ..++.++|+|||||++++|++|++||........ .........
T Consensus 155 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~ 231 (332)
T cd07857 155 FSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQ---LNQILQVLGTPDE 231 (332)
T ss_pred cccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHH---HHHHHHHhCCCCH
Confidence 4322111 11123468899999998765 4689999999999999999999999865432111 000000000
Q ss_pred -------cCCcc-------ccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 700 -------NGKIG-------DIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 700 -------~~~~~-------~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
..... ......+ ....+.....+.+++.+|++.||.+|||+.|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 232 ETLSRIGSPKAQNYIRSLPNIPKKPF-ESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HHHHhhhhhhHHHHHHhccccCCcch-HhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000 0000000 0011223567899999999999999999999873
No 369
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.98 E-value=7.6e-32 Score=279.72 Aligned_cols=237 Identities=26% Similarity=0.327 Sum_probs=194.7
Q ss_pred eeccCcEEEEEEEecCCCceEEEEEeCCCCC---cchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCCh
Q 042216 483 IGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ---QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGTL 559 (767)
Q Consensus 483 LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gsL 559 (767)
||+|+||.||++...+.++.+|+|.+..... .....+..|++++++++|+|++++++.+..++..+++|||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 6999999999999987788999999875432 2445789999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccccc
Q 042216 560 RDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQV 639 (767)
Q Consensus 560 ~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~ 639 (767)
.+++... ..+++..+..++.|++.||.||| ..+++|+||+|+||+++.++.++|+|||++....... ......
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~ 153 (250)
T cd05123 81 FSHLSKE--GRFSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG--SRTNTF 153 (250)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceecccCC--CcccCC
Confidence 9999654 35899999999999999999999 6889999999999999999999999999987543221 123345
Q ss_pred cCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhh
Q 042216 640 KGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVC 719 (767)
Q Consensus 640 ~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 719 (767)
.++..|+|||...+...+.++|+||||+++|||++|+.||...... ... ..... . ....+...
T Consensus 154 ~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~---~~~---~~~~~-~----------~~~~~~~~ 216 (250)
T cd05123 154 CGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRK---EIY---EKILK-D----------PLRFPEFL 216 (250)
T ss_pred cCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH---HHH---HHHhc-C----------CCCCCCCC
Confidence 6788999999999888999999999999999999999999544321 111 11111 0 11223334
Q ss_pred HHHHHHHHHHccccCCCCCCCHHH
Q 042216 720 LNQFVEVAMSCVNDDRIRRPSMSD 743 (767)
Q Consensus 720 ~~~l~~li~~Cl~~dp~~RPs~~e 743 (767)
+.++.+++.+||..||++||++.+
T Consensus 217 ~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 217 SPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CHHHHHHHHHHhcCCHhhCCCccc
Confidence 677899999999999999999954
No 370
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=1.3e-33 Score=324.74 Aligned_cols=254 Identities=22% Similarity=0.260 Sum_probs=204.4
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCC--CCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNP--GSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~--~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
+-+++....||.|.||.||-+...++|...|+|.++- ..........+|..+|..|+|||+|+.+|+-.+.+..++.|
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 4456667789999999999999999999999997753 23445567889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
|||++|+|.+.+.... -+++.....+..|++.|+.||| +++||||||||.||||+.+|.+|++|||.|.......
T Consensus 1314 EyC~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred HHhccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHH---hcCceecCCCccceeeecCCcEEeecccceeEecCch
Confidence 9999999999995443 3677777778899999999999 7889999999999999999999999999998654432
Q ss_pred C--ccccccccCCCcccChhhhccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccc
Q 042216 632 K--THVSTQVKGSIGYLDPEYYRLQ---LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDI 706 (767)
Q Consensus 632 ~--~~~~~~~~gt~~y~aPE~~~~~---~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 706 (767)
. ........||+.|||||++.+. ...-+.||||+|||++||+||+.||...+.+-.... .+..|.
T Consensus 1389 ~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy------~V~~gh---- 1458 (1509)
T KOG4645|consen 1389 QTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMY------HVAAGH---- 1458 (1509)
T ss_pred hcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHh------HHhccC----
Confidence 1 1112346799999999999753 355689999999999999999999977665321111 111122
Q ss_pred ccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 707 IDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 707 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
....|...+.+-.+++..|++.||++|-++.|+++.
T Consensus 1459 -----~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1459 -----KPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred -----CCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 233455667778899999999999999888877643
No 371
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.98 E-value=1.8e-32 Score=299.07 Aligned_cols=260 Identities=22% Similarity=0.284 Sum_probs=198.0
Q ss_pred HHhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeecCCc---
Q 042216 472 EATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQ--- 546 (767)
Q Consensus 472 ~~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~--- 546 (767)
...++|.....||+|++|.||+|....+++.||||++... .......+.+|+.++++++|+|++++++++...+.
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 3567899999999999999999999888899999998643 22334567889999999999999999998766554
Q ss_pred ---eEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCC
Q 042216 547 ---MILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGL 623 (767)
Q Consensus 547 ---~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGl 623 (767)
.++|+||+ +++|.+++.. ..+++..+..++.|+++||.||| +.+|+|+||||+||++++++.+||+|||+
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~kL~dfg~ 164 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFGL 164 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEccccc
Confidence 89999999 5699998854 35899999999999999999999 78899999999999999999999999999
Q ss_pred cccCCCCCCccccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhh---
Q 042216 624 CKFGPNFSKTHVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYR--- 699 (767)
Q Consensus 624 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~--- 699 (767)
+...... .....++..|+|||.+.. ..++.++|||||||++|||++|+.||........ +.. ......
T Consensus 165 ~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~--~~~-i~~~~~~~~ 236 (343)
T cd07851 165 ARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQ--LKR-IMNLVGTPD 236 (343)
T ss_pred ccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH--HHH-HHHhcCCCC
Confidence 8754321 223457888999999865 3678999999999999999999999964432211 110 000000
Q ss_pred --------cCCcccccccccc---C---CCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 700 --------NGKIGDIIDPFLK---G---NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 700 --------~~~~~~~~d~~l~---~---~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.......+..... . ......+.++.+++.+||+.+|.+|||+.+|++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 237 EELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 0000000000000 0 001123567899999999999999999999975
No 372
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.1e-32 Score=282.19 Aligned_cols=243 Identities=26% Similarity=0.349 Sum_probs=200.5
Q ss_pred HhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcc---hhHHHHHHHHHhcc-ccceeeeEeeeeecCCceE
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQG---ALEFQTEIGMLSQL-RYLHLVSLIGYCNDDGQMI 548 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~---~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~ 548 (767)
...+|..+.+||+|+||+|.++..++....+|||+++++...+ .+--+.|-++|... +-|.+++|..++..-+.+|
T Consensus 347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLy 426 (683)
T KOG0696|consen 347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLY 426 (683)
T ss_pred eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhee
Confidence 3457888999999999999999999999999999998763222 22235666777665 5789999999999999999
Q ss_pred EEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCC
Q 042216 549 LVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGP 628 (767)
Q Consensus 549 lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~ 628 (767)
+||||+.+|+|.-++++-. .+.+....-.+..||-||-+|| +++||.||||.+|||||.+|.+||+|||+++..-
T Consensus 427 FVMEyvnGGDLMyhiQQ~G--kFKEp~AvFYAaEiaigLFFLh---~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni 501 (683)
T KOG0696|consen 427 FVMEYVNGGDLMYHIQQVG--KFKEPVAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 501 (683)
T ss_pred eEEEEecCchhhhHHHHhc--ccCCchhhhhhHHHHHHhhhhh---cCCeeeeeccccceEeccCCceEeeecccccccc
Confidence 9999999999999996543 4777888899999999999999 8999999999999999999999999999998522
Q ss_pred CCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcccccc
Q 042216 629 NFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIID 708 (767)
Q Consensus 629 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 708 (767)
-....+...+||+.|+|||++..++|....|.|||||+||||+.|++||.+.++.+.-..+ . +
T Consensus 502 --~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI---~------------e 564 (683)
T KOG0696|consen 502 --FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAI---M------------E 564 (683)
T ss_pred --cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH---H------------H
Confidence 2233455789999999999999999999999999999999999999999876654321111 1 1
Q ss_pred ccccCCCChhhHHHHHHHHHHccccCCCCCC
Q 042216 709 PFLKGNAPPVCLNQFVEVAMSCVNDDRIRRP 739 (767)
Q Consensus 709 ~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RP 739 (767)
. .-.+|...+.+...++...+...|.+|.
T Consensus 565 h--nvsyPKslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 565 H--NVSYPKSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred c--cCcCcccccHHHHHHHHHHhhcCCcccc
Confidence 0 1135666778888999999999999995
No 373
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.98 E-value=3.6e-32 Score=311.51 Aligned_cols=257 Identities=25% Similarity=0.340 Sum_probs=191.1
Q ss_pred HHHhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC-CCcchhHHHHHHHHHhccccceeeeEeeeeecC-----
Q 042216 471 KEATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG-SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDD----- 544 (767)
Q Consensus 471 ~~~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~----- 544 (767)
.+...+|+++.+||+||||.|||++.+-+++.+|||++... +......+.+|+..|++|+|||||+.+..+.+.
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 45678999999999999999999999999999999998755 344455688999999999999999966532100
Q ss_pred --------------------------------------------------------------------------------
Q 042216 545 -------------------------------------------------------------------------------- 544 (767)
Q Consensus 545 -------------------------------------------------------------------------------- 544 (767)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred ----------------------------------CceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHh
Q 042216 545 ----------------------------------GQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYL 590 (767)
Q Consensus 545 ----------------------------------~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yL 590 (767)
-.+|+-||||+.-.|.++++++... -.-...++++.+|++||.|+
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~-~~~d~~wrLFreIlEGLaYI 713 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN-SQRDEAWRLFREILEGLAYI 713 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc-hhhHHHHHHHHHHHHHHHHH
Confidence 0157788999987777777554321 14567899999999999999
Q ss_pred HhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCC----------------CCCCccccccccCCCcccChhhhccC
Q 042216 591 HTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGP----------------NFSKTHVSTQVKGSIGYLDPEYYRLQ 654 (767)
Q Consensus 591 H~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~----------------~~~~~~~~~~~~gt~~y~aPE~~~~~ 654 (767)
| +.+||||||||.||++|++..+||+|||++.... ........+...||.-|+|||++.+.
T Consensus 714 H---~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~ 790 (1351)
T KOG1035|consen 714 H---DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDT 790 (1351)
T ss_pred H---hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccc
Confidence 9 7889999999999999999999999999997611 00111133567799999999999764
Q ss_pred ---CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHcc
Q 042216 655 ---LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCV 731 (767)
Q Consensus 655 ---~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl 731 (767)
.|+.|+|+||+|||++||+. ||...-+ ..... ..++.+.+..- ..........-.+++.+++
T Consensus 791 ~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsME--Ra~iL----~~LR~g~iP~~------~~f~~~~~~~e~slI~~Ll 855 (1351)
T KOG1035|consen 791 SSNKYNSKIDMYSLGIVLFEMLY---PFGTSME--RASIL----TNLRKGSIPEP------ADFFDPEHPEEASLIRWLL 855 (1351)
T ss_pred ccccccchhhhHHHHHHHHHHhc---cCCchHH--HHHHH----HhcccCCCCCC------cccccccchHHHHHHHHHh
Confidence 59999999999999999984 5533221 11111 11223332221 1111222333468999999
Q ss_pred ccCCCCCCCHHHHHH
Q 042216 732 NDDRIRRPSMSDVVW 746 (767)
Q Consensus 732 ~~dp~~RPs~~evl~ 746 (767)
+.||.+|||+.|+|.
T Consensus 856 ~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 856 SHDPSKRPTATELLN 870 (1351)
T ss_pred cCCCccCCCHHHHhh
Confidence 999999999999983
No 374
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=2.8e-31 Score=274.00 Aligned_cols=222 Identities=19% Similarity=0.176 Sum_probs=179.6
Q ss_pred cCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCChhhhhcc
Q 042216 486 GGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGTLRDHLYN 565 (767)
Q Consensus 486 G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gsL~~~L~~ 565 (767)
|.+|+||++....+++.+|+|++.... ++..|...+....|||++++++++.+.+..+++|||+++|+|.+++.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 899999999999888999999987543 234455555566799999999999999999999999999999999865
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccccccCCCcc
Q 042216 566 NDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQVKGSIGY 645 (767)
Q Consensus 566 ~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y 645 (767)
. ..+++..+..++.|++.||.||| +++++||||||+||+++.++.++++|||++...... .....++..|
T Consensus 79 ~--~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-----~~~~~~~~~y 148 (237)
T cd05576 79 F--LNIPEECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-----CDGEAVENMY 148 (237)
T ss_pred h--cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhccccc-----cccCCcCccc
Confidence 4 35899999999999999999999 788999999999999999999999999987643221 1223456779
Q ss_pred cChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHH
Q 042216 646 LDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVE 725 (767)
Q Consensus 646 ~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~ 725 (767)
+|||.+....++.++||||+|++++||++|+.|+....... . .......+......+.+
T Consensus 149 ~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~------------~---------~~~~~~~~~~~~~~~~~ 207 (237)
T cd05576 149 CAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI------------N---------THTTLNIPEWVSEEARS 207 (237)
T ss_pred cCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc------------c---------cccccCCcccCCHHHHH
Confidence 99999988889999999999999999999998864321100 0 00011123345667899
Q ss_pred HHHHccccCCCCCCCHHH
Q 042216 726 VAMSCVNDDRIRRPSMSD 743 (767)
Q Consensus 726 li~~Cl~~dp~~RPs~~e 743 (767)
++.+|++.||.+||++.+
T Consensus 208 li~~~l~~dp~~R~~~~~ 225 (237)
T cd05576 208 LLQQLLQFNPTERLGAGV 225 (237)
T ss_pred HHHHHccCCHHHhcCCCc
Confidence 999999999999999743
No 375
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.7e-31 Score=295.85 Aligned_cols=258 Identities=24% Similarity=0.379 Sum_probs=211.2
Q ss_pred HHHHHhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhcc-ccceeeeEeeeee-----
Q 042216 469 EIKEATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQL-RYLHLVSLIGYCN----- 542 (767)
Q Consensus 469 ei~~~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~----- 542 (767)
.+..-+.-|+..++||+|.+|.||+++....++.+|+|++.... ....+...|.++|+.+ .|||++.++|++.
T Consensus 13 ~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~ 91 (953)
T KOG0587|consen 13 SLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPG 91 (953)
T ss_pred hCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCC
Confidence 33344567888889999999999999999899999999987653 3445678899999988 6999999999884
Q ss_pred cCCceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecC
Q 042216 543 DDGQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFG 622 (767)
Q Consensus 543 ~~~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfG 622 (767)
.++++|||||||.+||..|++++-....+.|..+..|+..++.|+.+|| .+.++|||||-.|||+++++.+|++|||
T Consensus 92 ~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH---~nkviHRDikG~NiLLT~e~~VKLvDFG 168 (953)
T KOG0587|consen 92 NGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLH---NNKVIHRDIKGQNVLLTENAEVKLVDFG 168 (953)
T ss_pred CCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHh---hcceeeecccCceEEEeccCcEEEeeee
Confidence 3479999999999999999998766778999999999999999999999 7889999999999999999999999999
Q ss_pred CcccCCCCCCccccccccCCCcccChhhhccC-----CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHH
Q 042216 623 LCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQ-----LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATEC 697 (767)
Q Consensus 623 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~ 697 (767)
++..... .........||+.|||||++... .|+..+|+||+|++..||.-|.+|+..+-.....
T Consensus 169 vSaQlds--T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraL--------- 237 (953)
T KOG0587|consen 169 VSAQLDS--TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRAL--------- 237 (953)
T ss_pred eeeeeec--ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhh---------
Confidence 9875432 22334556799999999998753 4677899999999999999999998655332100
Q ss_pred hhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 698 YRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 698 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
+ .+. -.|..+-..+....+++.++|..||..|-++||++.++++
T Consensus 238 F---~Ip--RNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 238 F---LIP--RNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred c---cCC--CCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 0 011 1122222346678899999999999999999999999874
No 376
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=9.3e-31 Score=307.98 Aligned_cols=146 Identities=30% Similarity=0.404 Sum_probs=131.4
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
++|...+.||+|+||.||+|.....++.||||++.... ......+..|+.++..++||||+++++++...+..+|||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57888899999999999999998888999999986542 223456889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcc
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCK 625 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~ 625 (767)
||+.+++|.+++... ..+++..++.++.|++.||.||| ..+|+||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999999653 35889999999999999999999 6789999999999999999999999999986
No 377
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.97 E-value=2.2e-31 Score=264.48 Aligned_cols=272 Identities=23% Similarity=0.289 Sum_probs=199.5
Q ss_pred HhhccccceeeeccCcEEEEEEEecCCC----ceEEEEEeCCCCCc--chhHHHHHHHHHhccccceeeeEeeeeec-CC
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLNGDS----TPVAIKRLNPGSQQ--GALEFQTEIGMLSQLRYLHLVSLIGYCND-DG 545 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~~~~----~~vAVK~l~~~~~~--~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~-~~ 545 (767)
....|+....||+|.||.||++..+++. +.+|||+++..... -...-.+|+.+++.++|||++.|..++.. +.
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 3456888889999999999999765442 37899998754221 22356789999999999999999998876 77
Q ss_pred ceEEEEecCCCCChhhhhccC---CCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCC----CcEEE
Q 042216 546 QMILVYDYMARGTLRDHLYNN---DNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEE----WVAKV 618 (767)
Q Consensus 546 ~~~lV~ey~~~gsL~~~L~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~----~~~ki 618 (767)
..+|++||.+. +|.+.++-+ ....++-..+.+|+.||+.|+.||| ++-|+||||||.|||+..+ |.+||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH---SNWVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh---hhheeeccCCcceEEEeccCCccCeeEe
Confidence 99999999998 999888543 2346888999999999999999999 5669999999999999877 99999
Q ss_pred eecCCcccCCCCCCcc-ccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccc------hhH
Q 042216 619 SDFGLCKFGPNFSKTH-VSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQ------VNL 690 (767)
Q Consensus 619 ~DfGla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~------~~l 690 (767)
+|+|++|+..+.-... ....++.|+.|.|||.+.+ ..||++.||||.||+..||+|-++-|.+..+... .+.
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQ 257 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQ 257 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHH
Confidence 9999999876544333 3345678999999999876 5799999999999999999999988865432211 111
Q ss_pred HHHHHHHhhcC---Ccccc---ccc-----ccc-CCCCh-----------hhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 691 AVWATECYRNG---KIGDI---IDP-----FLK-GNAPP-----------VCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 691 ~~~~~~~~~~~---~~~~~---~d~-----~l~-~~~~~-----------~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
.....+.+.-. ...++ .+- .++ ..... .-....++|+..+|..||.+|.|+++.++-
T Consensus 258 l~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh 337 (438)
T KOG0666|consen 258 LDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEH 337 (438)
T ss_pred HHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcc
Confidence 11111111100 00000 000 000 00000 011236789999999999999999998864
Q ss_pred H
Q 042216 748 L 748 (767)
Q Consensus 748 L 748 (767)
.
T Consensus 338 ~ 338 (438)
T KOG0666|consen 338 P 338 (438)
T ss_pred c
Confidence 3
No 378
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-31 Score=265.20 Aligned_cols=250 Identities=21% Similarity=0.284 Sum_probs=198.3
Q ss_pred Hhhccccc-eeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhcc-ccceeeeEeeeeec----CCc
Q 042216 473 ATKDFNNL-LIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQL-RYLHLVSLIGYCND----DGQ 546 (767)
Q Consensus 473 ~t~~f~~~-~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~----~~~ 546 (767)
.+++|... .+||-|-.|+|..+.++.+++.+|+|++... ..-.+|+++.-.. .|||||+++++++. ...
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 34555543 3699999999999999999999999998643 2346777765544 69999999998753 467
Q ss_pred eEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEEC---CCCcEEEeecCC
Q 042216 547 MILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLD---EEWVAKVSDFGL 623 (767)
Q Consensus 547 ~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld---~~~~~ki~DfGl 623 (767)
+++|||.|+||.|++.+..+....+++.+.-.|+.||+.|+.||| +..|.||||||+|+|.. .+..+||+|||+
T Consensus 134 LLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred eEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHH---hcchhhccCChhheeeecCCCCcceEeccccc
Confidence 899999999999999998888888999999999999999999999 88899999999999996 456789999999
Q ss_pred cccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCc
Q 042216 624 CKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKI 703 (767)
Q Consensus 624 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~ 703 (767)
|+.... .......+-|+.|.|||++...+|+...|+||+||++|-|+||-+||......... .. +...+..+.
T Consensus 211 AK~t~~---~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ais--pg-Mk~rI~~gq- 283 (400)
T KOG0604|consen 211 AKETQE---PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS--PG-MKRRIRTGQ- 283 (400)
T ss_pred ccccCC---CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCC--hh-HHhHhhccC-
Confidence 985432 23345567899999999999999999999999999999999999999655321100 00 011111111
Q ss_pred cccccccccCCCCh----hhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 704 GDIIDPFLKGNAPP----VCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 704 ~~~~d~~l~~~~~~----~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
-.+|. ..++...++++.+|..+|.+|.|+.+++.
T Consensus 284 ---------y~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 284 ---------YEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred ---------ccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 11222 34677789999999999999999999873
No 379
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.7e-31 Score=264.62 Aligned_cols=260 Identities=22% Similarity=0.299 Sum_probs=202.4
Q ss_pred HHHHHHHhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccc-cceeeeEeeeeecCC
Q 042216 467 ISEIKEATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLR-YLHLVSLIGYCNDDG 545 (767)
Q Consensus 467 ~~ei~~~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~-Hpniv~l~g~~~~~~ 545 (767)
+.++-..|.+ +||+|+++.|--++.-.++..+|||++.+..........+|++++...+ |+||++|+.+++++.
T Consensus 75 F~d~YkLt~e-----~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~ 149 (463)
T KOG0607|consen 75 FEDMYKLTSE-----LLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT 149 (463)
T ss_pred HHHHHHhHHH-----HhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc
Confidence 5566666654 7999999999999887788999999998776667778999999999985 999999999999999
Q ss_pred ceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCC---cEEEeecC
Q 042216 546 QMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEW---VAKVSDFG 622 (767)
Q Consensus 546 ~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~---~~ki~DfG 622 (767)
..|||||-|.+|+|..+|++.. -+++.+..++..+||.||.+|| .++|.||||||+|||-.... -+|||||.
T Consensus 150 ~FYLVfEKm~GGplLshI~~~~--~F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~~pn~vsPvKiCDfD 224 (463)
T KOG0607|consen 150 RFYLVFEKMRGGPLLSHIQKRK--HFNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCESPNKVSPVKICDFD 224 (463)
T ss_pred eEEEEEecccCchHHHHHHHhh--hccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeecCCCCcCceeeeccc
Confidence 9999999999999999997654 4889999999999999999999 89999999999999986543 57999998
Q ss_pred CcccCCC-CC----CccccccccCCCcccChhhhc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccc-----
Q 042216 623 LCKFGPN-FS----KTHVSTQVKGSIGYLDPEYYR-----LQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQ----- 687 (767)
Q Consensus 623 la~~~~~-~~----~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~----- 687 (767)
|..-... .. .+......+|+..|||||+.. ...|+.+.|.||+|||||-|++|.+||.+.-....
T Consensus 225 LgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrG 304 (463)
T KOG0607|consen 225 LGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRG 304 (463)
T ss_pred cccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCC
Confidence 8642111 01 111123457889999999764 34688999999999999999999999976543211
Q ss_pred ---hhHHHHHHHHhhcCCccccccccccCCCCh----hhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 688 ---VNLAVWATECYRNGKIGDIIDPFLKGNAPP----VCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 688 ---~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~----~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
..-.....+.+++|. -++|. ..+.+..+++...+..|+.+|.++.+++.
T Consensus 305 e~Cr~CQ~~LFesIQEGk----------YeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 305 EVCRVCQNKLFESIQEGK----------YEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred CccHHHHHHHHHHHhccC----------CcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 000111122222222 12232 34566778999999999999999998875
No 380
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=1.9e-30 Score=266.70 Aligned_cols=239 Identities=28% Similarity=0.326 Sum_probs=194.8
Q ss_pred CcEEEEEEEecCCCceEEEEEeCCCCCcc-hhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCChhhhhcc
Q 042216 487 GFGNVYKGFLNGDSTPVAIKRLNPGSQQG-ALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGTLRDHLYN 565 (767)
Q Consensus 487 ~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~-~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gsL~~~L~~ 565 (767)
+||.||+|+..++++.+++|++....... .+.+.+|++.+++++|+|++++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999998877899999997665544 67899999999999999999999999999999999999999999999865
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccccccCCCcc
Q 042216 566 NDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQVKGSIGY 645 (767)
Q Consensus 566 ~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y 645 (767)
.. .+++.+++.++.+++.++.+|| ..+++|+||+|+||++++++.++|+|||++....... ......++..|
T Consensus 81 ~~--~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~ 152 (244)
T smart00220 81 RG--RLSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPEY 152 (244)
T ss_pred cc--CCCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCcCC
Confidence 43 3899999999999999999999 6789999999999999999999999999988654321 23345578899
Q ss_pred cChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHH
Q 042216 646 LDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVE 725 (767)
Q Consensus 646 ~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~ 725 (767)
++||.+....++.++||||||++++||++|..||...... .....+ ...+.... .......+.++.+
T Consensus 153 ~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~--~~~~~~----~~~~~~~~-------~~~~~~~~~~~~~ 219 (244)
T smart00220 153 MAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL--LELFKK----IGKPKPPF-------PPPEWKISPEAKD 219 (244)
T ss_pred CCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH--HHHHHH----HhccCCCC-------ccccccCCHHHHH
Confidence 9999999888999999999999999999999998553221 111111 11111000 0000015568999
Q ss_pred HHHHccccCCCCCCCHHHHHH
Q 042216 726 VAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 726 li~~Cl~~dp~~RPs~~evl~ 746 (767)
++.+|+..+|++||++.++++
T Consensus 220 ~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 220 LIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHccCCchhccCHHHHhh
Confidence 999999999999999999985
No 381
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=6.3e-30 Score=293.76 Aligned_cols=260 Identities=21% Similarity=0.196 Sum_probs=169.3
Q ss_pred HhhccccceeeeccCcEEEEEEEecCC----CceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeee------ee
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLNGD----STPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGY------CN 542 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~~~----~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~------~~ 542 (767)
..++|+..+.||+|+||.||+|++..+ +..||||++...... ..+..| .+....+.++..++.. +.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 457899999999999999999999877 789999988643221 111111 1111122222222111 34
Q ss_pred cCCceEEEEecCCCCChhhhhccCCCC------------------CCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCC
Q 042216 543 DDGQMILVYDYMARGTLRDHLYNNDNP------------------PLPWDRRLKICIGAARALHYLHTGASKVIIHRDVK 604 (767)
Q Consensus 543 ~~~~~~lV~ey~~~gsL~~~L~~~~~~------------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk 604 (767)
.+...++||||+++++|.+++...... ...+..+..++.|++.||.||| +++|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH---~~gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH---STGIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH---HCCEEeCcCC
Confidence 567899999999999999998643210 1123445679999999999999 7889999999
Q ss_pred CCCeEECC-CCcEEEeecCCcccCCCCCCccccccccCCCcccChhhhccC----------------------CCCchhh
Q 042216 605 TTNILLDE-EWVAKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQ----------------------LLTEKSD 661 (767)
Q Consensus 605 ~~NILld~-~~~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~s~ksD 661 (767)
|+|||+++ ++.+||+|||+++..... .........+++.|||||.+... .++.++|
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~-~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVG-INYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccc-cccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 99999985 679999999999754321 12233456789999999966422 2345679
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCc-------cchhHHHHHHHHhhcCCccccccccccC--CCChhhHHHHHHHHHHccc
Q 042216 662 VYSFGVVLLEVLCARPPILRTGDK-------KQVNLAVWATECYRNGKIGDIIDPFLKG--NAPPVCLNQFVEVAMSCVN 732 (767)
Q Consensus 662 V~SfGvvl~elltg~~P~~~~~~~-------~~~~l~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~~l~~li~~Cl~ 732 (767)
||||||+||||+++..+....... ....+..|....... ..+.+.. ...........+|+.+||+
T Consensus 362 VwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~d~~~~~~~dLi~~mL~ 435 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPR------ASPDLRRGFEVLDLDGGAGWELLKSMMR 435 (566)
T ss_pred cHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccc------cchhhhhhhhhccccchHHHHHHHHHcc
Confidence 999999999999977664211000 000111121110000 0000000 0000112345689999999
Q ss_pred cCCCCCCCHHHHHH
Q 042216 733 DDRIRRPSMSDVVW 746 (767)
Q Consensus 733 ~dp~~RPs~~evl~ 746 (767)
.||++|||+.|+++
T Consensus 436 ~dP~kR~ta~e~L~ 449 (566)
T PLN03225 436 FKGRQRISAKAALA 449 (566)
T ss_pred CCcccCCCHHHHhC
Confidence 99999999999985
No 382
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=4.6e-31 Score=277.30 Aligned_cols=243 Identities=23% Similarity=0.313 Sum_probs=198.3
Q ss_pred eeeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCC
Q 042216 481 LIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGT 558 (767)
Q Consensus 481 ~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gs 558 (767)
++||+|.||+||-|+++..++.||||++.+. .......+.+|+.+|++++||.||.|...|+..+..++|||-+. |+
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~-GD 648 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH-GD 648 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc-ch
Confidence 4899999999999999999999999998654 34455678999999999999999999999999999999999995 47
Q ss_pred hhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECC---CCcEEEeecCCcccCCCCCCccc
Q 042216 559 LRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDE---EWVAKVSDFGLCKFGPNFSKTHV 635 (767)
Q Consensus 559 L~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~---~~~~ki~DfGla~~~~~~~~~~~ 635 (767)
+.+.+.......|++..-.-++.||+.||.||| -++|+|+||||+|||+.. --++||||||+||+..+.+ -
T Consensus 649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks---F 722 (888)
T KOG4236|consen 649 MLEMILSSEKGRLPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS---F 722 (888)
T ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeeccccceeecchhh---h
Confidence 777776666678999999999999999999999 788999999999999954 3489999999999876422 3
Q ss_pred cccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCC
Q 042216 636 STQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNA 715 (767)
Q Consensus 636 ~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 715 (767)
...++||+.|+|||++..+.|...-|+||.||++|--+.|..||....+-.+ .+.-+...+. ...
T Consensus 723 RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdInd--QIQNAaFMyP-------------p~P 787 (888)
T KOG4236|consen 723 RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIND--QIQNAAFMYP-------------PNP 787 (888)
T ss_pred hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhH--HhhccccccC-------------CCc
Confidence 4567899999999999999999999999999999999999999965433211 1110000000 011
Q ss_pred ChhhHHHHHHHHHHccccCCCCCCCHHHHH
Q 042216 716 PPVCLNQFVEVAMSCVNDDRIRRPSMSDVV 745 (767)
Q Consensus 716 ~~~~~~~l~~li~~Cl~~dp~~RPs~~evl 745 (767)
-.+.....+++|...|+..-.+|-|...-+
T Consensus 788 W~eis~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 788 WSEISPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 123456778999999999999998877655
No 383
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.6e-31 Score=300.15 Aligned_cols=259 Identities=27% Similarity=0.305 Sum_probs=206.1
Q ss_pred HHHHHHHhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccccceeeeEeeeeec
Q 042216 467 ISEIKEATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLRYLHLVSLIGYCND 543 (767)
Q Consensus 467 ~~ei~~~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~ 543 (767)
+.+++...++|.++++||+|+||.|..++++..++.+|+|++++. ......-|..|-.+|..-..+=|+.|+-.+.+
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 455666678999999999999999999999999999999999763 23334458888889988888999999999999
Q ss_pred CCceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCC
Q 042216 544 DGQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGL 623 (767)
Q Consensus 544 ~~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGl 623 (767)
+.++|||||||+||+|..+|.+.. +++++...-++..|+.||.-|| +.|+|||||||+|||||..|.+||+|||.
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH---~mgyVHRDiKPDNvLld~~GHikLADFGs 221 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLH---SMGYVHRDIKPDNVLLDKSGHIKLADFGS 221 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHH---hccceeccCCcceeEecccCcEeeccchh
Confidence 999999999999999999996655 6888888889999999999999 88899999999999999999999999998
Q ss_pred cccCCCCCCccccccccCCCcccChhhhcc-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHh
Q 042216 624 CKFGPNFSKTHVSTQVKGSIGYLDPEYYRL-----QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECY 698 (767)
Q Consensus 624 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~ 698 (767)
|-..... ..-.+...+|||.|++||++.. +.|.+.+|.||+||++|||+.|..||.... +..-.....
T Consensus 222 Clkm~~d-G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads------lveTY~KIm 294 (1317)
T KOG0612|consen 222 CLKMDAD-GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS------LVETYGKIM 294 (1317)
T ss_pred HHhcCCC-CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH------HHHHHHHHh
Confidence 8654432 2233456779999999999862 578999999999999999999999996542 221111111
Q ss_pred hcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCC---HHHHH
Q 042216 699 RNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPS---MSDVV 745 (767)
Q Consensus 699 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs---~~evl 745 (767)
.-.. .+.-+.....+++..+||.+.+. +|+.|.. ++++-
T Consensus 295 ~hk~-------~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik 336 (1317)
T KOG0612|consen 295 NHKE-------SLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIK 336 (1317)
T ss_pred chhh-------hcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHH
Confidence 1000 11111123467788889988775 6888877 77765
No 384
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-30 Score=282.75 Aligned_cols=240 Identities=20% Similarity=0.225 Sum_probs=194.9
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhcc-ccceeeeEeeeeecCCceEEEEe
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~lV~e 552 (767)
++.|.....+|.|+|+.|-++.+...++..++|++... ..+-.+|+.++... +|||++++.+.+.+..+.++|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 45566666799999999999999988899999999654 22345677666665 69999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEE-CCCCcEEEeecCCcccCCCCC
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILL-DEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl-d~~~~~ki~DfGla~~~~~~~ 631 (767)
.+.+|-|.+.+.... ....++..|+.+++.++.||| .++++||||||+|||+ ++.++++|+|||.++.....
T Consensus 397 ~l~g~ell~ri~~~~---~~~~e~~~w~~~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~- 469 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKP---EFCSEASQWAAELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS- 469 (612)
T ss_pred hccccHHHHHHHhcc---hhHHHHHHHHHHHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEEEEechhhhCchh-
Confidence 999998888875543 222677889999999999999 7899999999999999 69999999999999865442
Q ss_pred CccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccc
Q 042216 632 KTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFL 711 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 711 (767)
....+-|..|.|||++....+++.+|+||||++||||++|+.||...... ..+ ...+..
T Consensus 470 ----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~--~ei----~~~i~~----------- 528 (612)
T KOG0603|consen 470 ----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG--IEI----HTRIQM----------- 528 (612)
T ss_pred ----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch--HHH----HHhhcC-----------
Confidence 22335678999999999999999999999999999999999999655443 111 111111
Q ss_pred cCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 712 KGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 712 ~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
+......+....+|+.+||+.||.+||+|.++..
T Consensus 529 -~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 529 -PKFSECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred -CccccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 2222456778899999999999999999999873
No 385
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=4.5e-30 Score=236.39 Aligned_cols=264 Identities=19% Similarity=0.242 Sum_probs=197.3
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC--CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS--QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
+|...++||+|.||+|++|+..+..+.||+|+++.+. +.-...-.+|+.+|+.++|+|||++++....++.+-||+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 4555668999999999999999888999999886542 22344578999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKT 633 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~ 633 (767)
|.. +|..+...- +..++......++.|+.+||.++| ++.+.|||+||.|.||+.+|+.|++|||+++...-. .
T Consensus 83 cdq-dlkkyfdsl-ng~~d~~~~rsfmlqllrgl~fch---shnvlhrdlkpqnllin~ngelkladfglarafgip--v 155 (292)
T KOG0662|consen 83 CDQ-DLKKYFDSL-NGDLDPEIVRSFMLQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP--V 155 (292)
T ss_pred hhH-HHHHHHHhc-CCcCCHHHHHHHHHHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEecccchhhhcCCc--e
Confidence 976 787776443 446899999999999999999999 888999999999999999999999999999864321 1
Q ss_pred cccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHhhcCC---cccccc
Q 042216 634 HVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECYRNGK---IGDIID 708 (767)
Q Consensus 634 ~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~d 708 (767)
.+......|..|.+|.++.+ +.|+...|+||-||++.|+.. |++-|.+.+..++...+-|......+.. +.++.|
T Consensus 156 rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpd 235 (292)
T KOG0662|consen 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPD 235 (292)
T ss_pred EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCC
Confidence 23344557889999999876 468999999999999999987 6666655544433333333333222221 222233
Q ss_pred ccccCCCChhh---------HHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 709 PFLKGNAPPVC---------LNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 709 ~~l~~~~~~~~---------~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
-.....++..- ...=.+++...+.-+|.+|.++++.++
T Consensus 236 yk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 236 YKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 22222222211 112245666666678999999887764
No 386
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-30 Score=245.51 Aligned_cols=207 Identities=25% Similarity=0.383 Sum_probs=173.6
Q ss_pred HHHHhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC-CCcchhHHHHHHHHHhcc-ccceeeeEeeeeecCCce
Q 042216 470 IKEATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG-SQQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDGQM 547 (767)
Q Consensus 470 i~~~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~ 547 (767)
++...+++.....||+|++|.|-+-++...++..|+|++... ..+..++..+|+.+..+- .+|.+|.++|...+++..
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdv 120 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDV 120 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccE
Confidence 444556666677899999999999999989999999999755 345556788888877665 799999999999999999
Q ss_pred EEEEecCCCCChhhhhcc--CCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcc
Q 042216 548 ILVYDYMARGTLRDHLYN--NDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCK 625 (767)
Q Consensus 548 ~lV~ey~~~gsL~~~L~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~ 625 (767)
++.||.|.. ||+.+-++ ..+..+++..+-+|+..+..||.|||+ ...+||||+||+||||+.+|++||||||++-
T Consensus 121 wIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG 197 (282)
T KOG0984|consen 121 WICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISG 197 (282)
T ss_pred EEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccce
Confidence 999999976 88877643 245568999999999999999999997 6789999999999999999999999999987
Q ss_pred cCCCCCCccccccccCCCcccChhhhcc----CCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 042216 626 FGPNFSKTHVSTQVKGSIGYLDPEYYRL----QLLTEKSDVYSFGVVLLEVLCARPPILRT 682 (767)
Q Consensus 626 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~s~ksDV~SfGvvl~elltg~~P~~~~ 682 (767)
...+ +-..+...|...|||||.+.. ..|+.||||||+|+.+.||.+++.||..-
T Consensus 198 ~L~d---SiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 198 YLVD---SIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred eehh---hhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence 5432 223344568889999998753 47899999999999999999999999544
No 387
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=1.9e-29 Score=282.78 Aligned_cols=260 Identities=20% Similarity=0.228 Sum_probs=181.9
Q ss_pred HhhccccceeeeccCcEEEEEEEec----------------CCCceEEEEEeCCCCCcchhH--------------HHHH
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLN----------------GDSTPVAIKRLNPGSQQGALE--------------FQTE 522 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~----------------~~~~~vAVK~l~~~~~~~~~~--------------f~~E 522 (767)
..++|+..++||+|+||.||+|.+. ..++.||||++........++ +..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 3568999999999999999999752 233579999987543332223 3457
Q ss_pred HHHHhcccccee-----eeEeeeeec--------CCceEEEEecCCCCChhhhhccCC----------------------
Q 042216 523 IGMLSQLRYLHL-----VSLIGYCND--------DGQMILVYDYMARGTLRDHLYNND---------------------- 567 (767)
Q Consensus 523 i~~l~~l~Hpni-----v~l~g~~~~--------~~~~~lV~ey~~~gsL~~~L~~~~---------------------- 567 (767)
+.++.+++|.++ ++++++|.. ++..+|||||+++|+|.++|+...
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777788876654 677888753 357899999999999999986421
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccccccCCCcccC
Q 042216 568 NPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLD 647 (767)
Q Consensus 568 ~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~a 647 (767)
...++|..+..++.|++.+|.||| ..+|+||||||+|||++.++.+||+|||+++...... ........+++.|+|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~-~~~~~~g~~tp~Y~a 378 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI-NFNPLYGMLDPRYSP 378 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCC-ccCccccCCCcceeC
Confidence 123578889999999999999999 6789999999999999999999999999987543211 111112335789999
Q ss_pred hhhhccCCC----------------------CchhhHHHHHHHHHHHHhCCC-CCCCCCCcc------chhHHHHHHHHh
Q 042216 648 PEYYRLQLL----------------------TEKSDVYSFGVVLLEVLCARP-PILRTGDKK------QVNLAVWATECY 698 (767)
Q Consensus 648 PE~~~~~~~----------------------s~ksDV~SfGvvl~elltg~~-P~~~~~~~~------~~~l~~~~~~~~ 698 (767)
||.+..... ..+.||||+||+++||++|.. |+....... ...+..|.. .
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~--~ 456 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRM--Y 456 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHh--h
Confidence 998754321 134799999999999999875 653321100 011112211 1
Q ss_pred hcCCccccccccccCCCChhhHHHHHHHHHHccccCC---CCCCCHHHHHH
Q 042216 699 RNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDR---IRRPSMSDVVW 746 (767)
Q Consensus 699 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp---~~RPs~~evl~ 746 (767)
.... ..-...........+++.+|+..+| .+|+|++|+++
T Consensus 457 ~~~~--------~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 457 KGQK--------YDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred cccC--------CCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 1111 0011122345677899999998766 68999999975
No 388
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.5e-31 Score=258.52 Aligned_cols=265 Identities=22% Similarity=0.331 Sum_probs=198.5
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC-cc-hhHHHHHHHHHhccccceeeeEeeeeecC--------C
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ-QG-ALEFQTEIGMLSQLRYLHLVSLIGYCNDD--------G 545 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~-~~-~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~--------~ 545 (767)
.|....+||+|.||.||++..+++++.||+|+.....+ .+ -..-.+|+++|..|+|+|++.++..|... .
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence 34555689999999999999999989999987644322 22 23468899999999999999999998532 3
Q ss_pred ceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcc
Q 042216 546 QMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCK 625 (767)
Q Consensus 546 ~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~ 625 (767)
.++||+.+|+. +|.-.|... ...++..++.+++.++..||.|+| ...|+|||+|+.|+||+.++.+||+|||+++
T Consensus 98 t~ylVf~~ceh-DLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgilklADFGlar 172 (376)
T KOG0669|consen 98 TFYLVFDFCEH-DLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIH---RNKILHRDMKAANVLITKDGILKLADFGLAR 172 (376)
T ss_pred eeeeeHHHhhh-hHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHH---HhhHHhhcccHhhEEEcCCceEEeecccccc
Confidence 58999999988 888888543 346889999999999999999999 7889999999999999999999999999997
Q ss_pred cCCCCCC--ccccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCC
Q 042216 626 FGPNFSK--THVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGK 702 (767)
Q Consensus 626 ~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~ 702 (767)
.+..... ....+..+.|..|.+||.+.+ ..++++.|||.-||++.||+|+.+-+.+..+..+..++...........
T Consensus 173 ~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkev 252 (376)
T KOG0669|consen 173 AFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEV 252 (376)
T ss_pred ceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCccc
Confidence 5432221 112344556899999998875 5799999999999999999999998877766555555443322222211
Q ss_pred cccccccccc-----CCCC-------hh------hHHHHHHHHHHccccCCCCCCCHHHHH
Q 042216 703 IGDIIDPFLK-----GNAP-------PV------CLNQFVEVAMSCVNDDRIRRPSMSDVV 745 (767)
Q Consensus 703 ~~~~~d~~l~-----~~~~-------~~------~~~~l~~li~~Cl~~dp~~RPs~~evl 745 (767)
..++..-.+. .+.+ .+ ...+.++++..++..||.+|+.+++++
T Consensus 253 WP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~al 313 (376)
T KOG0669|consen 253 WPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQAL 313 (376)
T ss_pred CCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhh
Confidence 1111100000 0000 00 123568899999999999999988877
No 389
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.4e-29 Score=253.21 Aligned_cols=249 Identities=25% Similarity=0.364 Sum_probs=202.7
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhcc-ccceeeeEeeeeecCCceEE
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDGQMIL 549 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~l 549 (767)
.++|..+.+||+|+|.+|.++.++.+.+.+|+|++++.- .+...=.+.|-.+..+. +||.+|-|..++..+..+++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 468999999999999999999999999999999987642 22233356777777666 79999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCC
Q 042216 550 VYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPN 629 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~ 629 (767)
|.||+++|+|.-++++. .+|+++...-....|..||.||| +.+||.||||.+|||+|..|.+|++|+|+++..-
T Consensus 329 vieyv~ggdlmfhmqrq--rklpeeharfys~ei~lal~flh---~rgiiyrdlkldnvlldaeghikltdygmcke~l- 402 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEICLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL- 402 (593)
T ss_pred EEEEecCcceeeehhhh--hcCcHHHhhhhhHHHHHHHHHHh---hcCeeeeeccccceEEccCCceeecccchhhcCC-
Confidence 99999999999888554 45899999999999999999999 8999999999999999999999999999998643
Q ss_pred CCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCc-cchhHHHHHHHHhhcCCcccccc
Q 042216 630 FSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDK-KQVNLAVWATECYRNGKIGDIID 708 (767)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~d 708 (767)
.....+...+||+.|.|||.+++..|....|.|++||+++||+.|+.||.-.+.. ...+..++..+.+.+..
T Consensus 403 -~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekq------ 475 (593)
T KOG0695|consen 403 -GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQ------ 475 (593)
T ss_pred -CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhc------
Confidence 3344567789999999999999999999999999999999999999999644321 22333344444333322
Q ss_pred ccccCCCChhhHHHHHHHHHHccccCCCCCC
Q 042216 709 PFLKGNAPPVCLNQFVEVAMSCVNDDRIRRP 739 (767)
Q Consensus 709 ~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RP 739 (767)
++ .|...+-+...+++.-+.+||.+|.
T Consensus 476 --ir--iprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 476 --IR--IPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred --cc--ccceeehhhHHHHHHhhcCCcHHhc
Confidence 22 2334445566788999999999985
No 390
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.96 E-value=4.1e-30 Score=263.21 Aligned_cols=262 Identities=20% Similarity=0.293 Sum_probs=201.6
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccc-c-c----eeeeEeeeeecCCce
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLR-Y-L----HLVSLIGYCNDDGQM 547 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~-H-p----niv~l~g~~~~~~~~ 547 (767)
+++|....++|+|.||.|-.......+..||||+++... .-.+.-+-|+++|.++. + | -++++.+|+.-.++.
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 678899999999999999999998888899999987432 22334567899999993 2 2 578888899999999
Q ss_pred EEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECC---------------
Q 042216 548 ILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDE--------------- 612 (767)
Q Consensus 548 ~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~--------------- 612 (767)
++|+|.+. -|+.++|..+.-.+.+..++..|+.|+++++++|| +.+++|-||||+|||+.+
T Consensus 167 CivfellG-~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh---~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~ 242 (415)
T KOG0671|consen 167 CIVFELLG-LSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLH---DLKLTHTDLKPENILFVSSEYFKTYNPKKKVCF 242 (415)
T ss_pred EEEEeccC-hhHHHHhccCCccccchHHHHHHHHHHHHHHHHHH---hcceeecCCChheEEEeccceEEEeccCCccce
Confidence 99999984 39999998877778999999999999999999999 888999999999999821
Q ss_pred -----CCcEEEeecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccc
Q 042216 613 -----EWVAKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQ 687 (767)
Q Consensus 613 -----~~~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~ 687 (767)
+..+||.|||.|...... ...++.|..|.|||++.+-.++.++||||+||||.||.+|..-|..-++.+.
T Consensus 243 ~r~~ks~~I~vIDFGsAtf~~e~-----hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EH 317 (415)
T KOG0671|consen 243 IRPLKSTAIKVIDFGSATFDHEH-----HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEH 317 (415)
T ss_pred eccCCCcceEEEecCCcceeccC-----cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHH
Confidence 346899999999864332 2455678899999999999999999999999999999999999977665443
Q ss_pred hhHHHHHHHH--------------hhcCCccccccccccC----------------CCChhhHHHHHHHHHHccccCCCC
Q 042216 688 VNLAVWATEC--------------YRNGKIGDIIDPFLKG----------------NAPPVCLNQFVEVAMSCVNDDRIR 737 (767)
Q Consensus 688 ~~l~~~~~~~--------------~~~~~~~~~~d~~l~~----------------~~~~~~~~~l~~li~~Cl~~dp~~ 737 (767)
..+.+.+... ...+++. ..+....+ .....+..+|.+|+..||..||.+
T Consensus 318 LaMMerIlGp~P~~mi~r~~~~Kyf~~~rld-w~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~ 396 (415)
T KOG0671|consen 318 LAMMERILGPIPSRMIKKTRKEKYFRRGRLD-WPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPAR 396 (415)
T ss_pred HHHHHHhhCCCcHHHhhhhhhHhhhhccccc-CccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccc
Confidence 2211111100 0111000 00000000 012234567999999999999999
Q ss_pred CCCHHHHHH
Q 042216 738 RPSMSDVVW 746 (767)
Q Consensus 738 RPs~~evl~ 746 (767)
|+|+.|++.
T Consensus 397 RiTl~EAL~ 405 (415)
T KOG0671|consen 397 RITLREALS 405 (415)
T ss_pred cccHHHHhc
Confidence 999999985
No 391
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.1e-30 Score=271.90 Aligned_cols=248 Identities=23% Similarity=0.284 Sum_probs=203.9
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEE
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ 551 (767)
.++..+..||-||||+|=+++.+.....+|+|++++. ......-...|-++|.+.+.|.||+|+..+.++...||+|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 4555666899999999999999876556888888654 2233334678999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
|-|-+|.|+..|+.. ..++.....-++..+.+|+.||| +++||.|||||+|++||.+|-+||.|||+|+......
T Consensus 500 EaClGGElWTiLrdR--g~Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~ 574 (732)
T KOG0614|consen 500 EACLGGELWTILRDR--GSFDDYTARFYVACVLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR 574 (732)
T ss_pred HhhcCchhhhhhhhc--CCcccchhhhhHHHHHHHHHHHH---hcCceeccCChhheeeccCCceEEeehhhHHHhccCC
Confidence 999999999999654 45888888889999999999999 8899999999999999999999999999999765433
Q ss_pred CccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccc
Q 042216 632 KTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFL 711 (767)
Q Consensus 632 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 711 (767)
.+-..+||+.|.|||++.++..+...|.||+|++++||++|.+||.+.+....-+++.-.. |
T Consensus 575 ---KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGi------------d--- 636 (732)
T KOG0614|consen 575 ---KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGI------------D--- 636 (732)
T ss_pred ---ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhh------------h---
Confidence 3346789999999999999999999999999999999999999998877643333222111 1
Q ss_pred cCCCChhhHHHHHHHHHHccccCCCCCCC-----HHHHH
Q 042216 712 KGNAPPVCLNQFVEVAMSCVNDDRIRRPS-----MSDVV 745 (767)
Q Consensus 712 ~~~~~~~~~~~l~~li~~Cl~~dp~~RPs-----~~evl 745 (767)
....|........+++++.+..+|.+|.- +.||.
T Consensus 637 ~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIk 675 (732)
T KOG0614|consen 637 KIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIK 675 (732)
T ss_pred hhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHH
Confidence 11234555667789999999999999985 55554
No 392
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.9e-29 Score=260.31 Aligned_cols=257 Identities=25% Similarity=0.350 Sum_probs=198.2
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC--Ccc-----hhHHHHHHHHHhccccceeeeEeeeee-cCCc
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS--QQG-----ALEFQTEIGMLSQLRYLHLVSLIGYCN-DDGQ 546 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~--~~~-----~~~f~~Ei~~l~~l~Hpniv~l~g~~~-~~~~ 546 (767)
++|-.+++||+|||+.||++..-...+-||||+-..+. ..+ .+--.+|..+.+.|.||.||++++|+. +.+.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 45667778999999999999988777889999864331 111 223578999999999999999999985 5678
Q ss_pred eEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEEC---CCCcEEEeecCC
Q 042216 547 MILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLD---EEWVAKVSDFGL 623 (767)
Q Consensus 547 ~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld---~~~~~ki~DfGl 623 (767)
+|-|.|||++.+|+-||+.+ +.+++++...|++||+.||.||.+. +.+|||-||||.||||. .-|.+||+||||
T Consensus 543 FCTVLEYceGNDLDFYLKQh--klmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGL 619 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLKQH--KLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGL 619 (775)
T ss_pred ceeeeeecCCCchhHHHHhh--hhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecch
Confidence 89999999999999999654 4589999999999999999999854 58899999999999995 457899999999
Q ss_pred cccCCCCCCcc-----ccccccCCCcccChhhhcc----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHH
Q 042216 624 CKFGPNFSKTH-----VSTQVKGSIGYLDPEYYRL----QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWA 694 (767)
Q Consensus 624 a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~----~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~ 694 (767)
+++....+... .+....||..|++||.+.- .+.+.|.||||.||++|..+.|+.||..... +.++
T Consensus 620 SKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqs--QQdI---- 693 (775)
T KOG1151|consen 620 SKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQS--QQDI---- 693 (775)
T ss_pred hhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchh--HHHH----
Confidence 99876654442 3446779999999998753 3578899999999999999999999954422 1111
Q ss_pred HHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHH
Q 042216 695 TECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVV 745 (767)
Q Consensus 695 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl 745 (767)
+.+..+.+.-...+ +.-+..+.+...+|++||+.--++|....++.
T Consensus 694 ---LqeNTIlkAtEVqF--P~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 694 ---LQENTILKATEVQF--PPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred ---HhhhchhcceeccC--CCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 12222222211111 12233456678999999999999997766654
No 393
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=2.1e-29 Score=279.67 Aligned_cols=244 Identities=28% Similarity=0.353 Sum_probs=185.6
Q ss_pred cccceeeeccCcEE-EEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhcc-ccceeeeEeeeeecCCceEEEEecC
Q 042216 477 FNNLLIIGRGGFGN-VYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 477 f~~~~~LG~G~fG~-Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
|...+++|.|+-|+ ||+|...+ +.||||++-... ..-.++|+..|+.- +|||||+.++.-.+...+|+..|.|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye~--R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC 585 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYEG--REVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC 585 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeCC--ceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence 55556799999987 89999965 799999986432 22457899999887 6999999998888889999999999
Q ss_pred CCCChhhhhccC--CCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECC-----CCcEEEeecCCcccC
Q 042216 555 ARGTLRDHLYNN--DNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDE-----EWVAKVSDFGLCKFG 627 (767)
Q Consensus 555 ~~gsL~~~L~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~-----~~~~ki~DfGla~~~ 627 (767)
.. +|.+++... ......-...+.+..|++.||++|| +.+||||||||.||||+. ..+++|+|||+++..
T Consensus 586 ~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 586 AC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred hh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 76 999999763 1111222445778899999999999 788999999999999975 358999999999876
Q ss_pred CCCCCcc-ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCCccchhHHHHHHHHhhcCCccc
Q 042216 628 PNFSKTH-VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCA-RPPILRTGDKKQVNLAVWATECYRNGKIGD 705 (767)
Q Consensus 628 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg-~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~ 705 (767)
......- ......||-||+|||++....-+...||||+|||+|+.++| .+||...-+.+ .++.. .+..+..
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~-~NIl~------~~~~L~~ 734 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ-ANILT------GNYTLVH 734 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh-hhhhc------Cccceee
Confidence 4432221 23456799999999999998888899999999999999985 89995443211 11110 0000000
Q ss_pred cccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHH
Q 042216 706 IIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVV 745 (767)
Q Consensus 706 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl 745 (767)
+. ...++ +..+||.+|++++|..||++.+|+
T Consensus 735 -----L~--~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL 765 (903)
T KOG1027|consen 735 -----LE--PLPDC--EAKDLISRMLNPDPQLRPSATDVL 765 (903)
T ss_pred -----ec--cCchH--HHHHHHHHhcCCCcccCCCHHHHh
Confidence 00 11122 678999999999999999999998
No 394
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=1.6e-28 Score=263.25 Aligned_cols=222 Identities=25% Similarity=0.351 Sum_probs=179.9
Q ss_pred HHHHHHHh---hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC---cchhHHHHHHHHHhccccceeeeEeee
Q 042216 467 ISEIKEAT---KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ---QGALEFQTEIGMLSQLRYLHLVSLIGY 540 (767)
Q Consensus 467 ~~ei~~~t---~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l~Hpniv~l~g~ 540 (767)
|-.|+.+. .-|-.++.||-|+||+|.++...++...+|.|.|.+... +...-...|-.||..-..+=||+|+-.
T Consensus 618 YiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyyS 697 (1034)
T KOG0608|consen 618 YIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYS 697 (1034)
T ss_pred HHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEE
Confidence 33444443 347777889999999999999888888999999976532 333346789999999999999999999
Q ss_pred eecCCceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEee
Q 042216 541 CNDDGQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSD 620 (767)
Q Consensus 541 ~~~~~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~D 620 (767)
+.+++.+|+||+|++||++..+|.+.. -+.+....-.+..+..|+++.| ..|+|||||||+|||||.+|.+||+|
T Consensus 698 FQDkdnLYFVMdYIPGGDmMSLLIrmg--IFeE~LARFYIAEltcAiesVH---kmGFIHRDiKPDNILIDrdGHIKLTD 772 (1034)
T KOG0608|consen 698 FQDKDNLYFVMDYIPGGDMMSLLIRMG--IFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTD 772 (1034)
T ss_pred eccCCceEEEEeccCCccHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHH---hccceecccCccceEEccCCceeeee
Confidence 999999999999999999999997654 3677777778889999999999 88899999999999999999999999
Q ss_pred cCCcccC---------CCCCC---------------c----------------cccccccCCCcccChhhhccCCCCchh
Q 042216 621 FGLCKFG---------PNFSK---------------T----------------HVSTQVKGSIGYLDPEYYRLQLLTEKS 660 (767)
Q Consensus 621 fGla~~~---------~~~~~---------------~----------------~~~~~~~gt~~y~aPE~~~~~~~s~ks 660 (767)
||||.-+ .+... . ......+||+.|+|||++....++..+
T Consensus 773 FGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~c 852 (1034)
T KOG0608|consen 773 FGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLC 852 (1034)
T ss_pred ccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccc
Confidence 9998421 10000 0 001124699999999999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCCCccc-hhHHHH
Q 042216 661 DVYSFGVVLLEVLCARPPILRTGDKKQ-VNLAVW 693 (767)
Q Consensus 661 DV~SfGvvl~elltg~~P~~~~~~~~~-~~l~~~ 693 (767)
|.||.||||+||+.|++||......+. ...+.|
T Consensus 853 dwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw 886 (1034)
T KOG0608|consen 853 DWWSVGVILYEMLVGQPPFLADTPGETQYKVINW 886 (1034)
T ss_pred hhhHhhHHHHHHhhCCCCccCCCCCcceeeeeeh
Confidence 999999999999999999977665443 334444
No 395
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.1e-29 Score=247.79 Aligned_cols=265 Identities=22% Similarity=0.267 Sum_probs=200.2
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeecC-----CceEE
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDD-----GQMIL 549 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~-----~~~~l 549 (767)
.+..+-||-|+||.||.++...+++.||+|++... +-...+.+.+|+++|..++|.|++..++..... .++|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 34455799999999999999999999999988543 223456789999999999999999999887543 36789
Q ss_pred EEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCC
Q 042216 550 VYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPN 629 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~ 629 (767)
++|.|+. +|...+-. .+.|+-+.+.-+..||++||.||| +.+|.||||||.|.|++.+...||||||+++....
T Consensus 135 ~TELmQS-DLHKIIVS--PQ~Ls~DHvKVFlYQILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 135 LTELMQS-DLHKIIVS--PQALTPDHVKVFVYQILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHHHh-hhhheecc--CCCCCcchhhhhHHHHHhhhHHHh---hcchhhccCCCccEEeccCceEEecccccccccch
Confidence 9999976 88888743 456888999999999999999999 78899999999999999999999999999996543
Q ss_pred CCCccccccccCCCcccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHH--------hhc
Q 042216 630 FSKTHVSTQVKGSIGYLDPEYYRL-QLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATEC--------YRN 700 (767)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~--------~~~ 700 (767)
......+..+-|..|.|||.+++ ..|+...||||.||+..||+..+.-|......++.+++.-.... --+
T Consensus 209 -d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACE 287 (449)
T KOG0664|consen 209 -RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACE 287 (449)
T ss_pred -hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhh
Confidence 23333455567889999999986 47999999999999999999999888766655544443211100 011
Q ss_pred CCccccccccccC---------CCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 042216 701 GKIGDIIDPFLKG---------NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGL 748 (767)
Q Consensus 701 ~~~~~~~d~~l~~---------~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L 748 (767)
|.-..++....+. ..+.....+.+.+...++..||..|.+..+.+..+
T Consensus 288 GAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 288 GAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 1111111111111 11122334566788889999999999988887654
No 396
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=4.3e-27 Score=235.51 Aligned_cols=211 Identities=34% Similarity=0.526 Sum_probs=183.8
Q ss_pred eeccCcEEEEEEEecCCCceEEEEEeCCCCCc-chhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCChhh
Q 042216 483 IGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQ-GALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGTLRD 561 (767)
Q Consensus 483 LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~-~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gsL~~ 561 (767)
||+|.+|.||++...++++.+++|++...... ....+.+|++.++.++|++++++++++......++++|++++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 68999999999999876789999999765432 34678999999999999999999999999899999999999999999
Q ss_pred hhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECC-CCcEEEeecCCcccCCCCCCcccccccc
Q 042216 562 HLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDE-EWVAKVSDFGLCKFGPNFSKTHVSTQVK 640 (767)
Q Consensus 562 ~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~-~~~~ki~DfGla~~~~~~~~~~~~~~~~ 640 (767)
++.... ..+++..+..++.++++++.+|| ..+++|+||+|.||+++. ++.++|+|||.+........ ......
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~ 154 (215)
T cd00180 81 LLKENE-GKLSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTIV 154 (215)
T ss_pred HHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhccc
Confidence 986542 35899999999999999999999 678999999999999999 89999999999876433211 123345
Q ss_pred CCCcccChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhh
Q 042216 641 GSIGYLDPEYYRLQ-LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVC 719 (767)
Q Consensus 641 gt~~y~aPE~~~~~-~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 719 (767)
+...|++||..... ..+.+.|+|++|+++++|
T Consensus 155 ~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------------------------------- 187 (215)
T cd00180 155 GTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------------------------------------- 187 (215)
T ss_pred CCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------------------
Confidence 77889999999877 888999999999999998
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 720 LNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 720 ~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
..+.+++..|++.+|.+||++.++++.
T Consensus 188 -~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 -PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred -HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 457899999999999999999999864
No 397
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=5e-26 Score=231.46 Aligned_cols=200 Identities=33% Similarity=0.448 Sum_probs=172.8
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCc-chhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCC
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQ-GALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMA 555 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~-~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~ 555 (767)
|...+.||+|++|.||++...++++.+++|.+...... ..+.+.+|++.+.+++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 44567899999999999999887789999999866544 56788999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccc
Q 042216 556 RGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHV 635 (767)
Q Consensus 556 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~ 635 (767)
+++|.+++..... .+++..+..++.+++.++.+|| ..+++|+||+++||+++.++.++|+|||++....... ...
T Consensus 81 ~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~-~~~ 155 (225)
T smart00221 81 GGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDL-AAL 155 (225)
T ss_pred CCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc-ccc
Confidence 9999999865432 1889999999999999999999 6789999999999999999999999999988654322 012
Q ss_pred cccccCCCcccChhhh-ccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 042216 636 STQVKGSIGYLDPEYY-RLQLLTEKSDVYSFGVVLLEVLCARPPILR 681 (767)
Q Consensus 636 ~~~~~gt~~y~aPE~~-~~~~~s~ksDV~SfGvvl~elltg~~P~~~ 681 (767)
.....++..|++||.+ ....++.++|||+||++++||++|+.||..
T Consensus 156 ~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 156 LKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 2334577889999998 667888899999999999999999999954
No 398
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.94 E-value=1.9e-27 Score=253.45 Aligned_cols=197 Identities=22% Similarity=0.360 Sum_probs=170.1
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC--------cchhHHHHHHHHHhccc---cceeeeEeeeeec
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ--------QGALEFQTEIGMLSQLR---YLHLVSLIGYCND 543 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~--------~~~~~f~~Ei~~l~~l~---Hpniv~l~g~~~~ 543 (767)
.+|.....||+|+||.|+++.++.....|+||.+.+..- ...-..-.||++|..|+ |+||+++++++++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 368888899999999999999998888999998865411 11123567999999997 9999999999999
Q ss_pred CCceEEEEecCC-CCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecC
Q 042216 544 DGQMILVYDYMA-RGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFG 622 (767)
Q Consensus 544 ~~~~~lV~ey~~-~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfG 622 (767)
++.+||+||-.. +-+|++++..+ +.+++.+...|+.||+.|+++|| +++|||||||-+||.++.+|.+||+|||
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~k--p~m~E~eAk~IFkQV~agi~hlh---~~~ivhrdikdenvivd~~g~~klidfg 715 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFK--PRMDEPEAKLIFKQVVAGIKHLH---DQGIVHRDIKDENVIVDSNGFVKLIDFG 715 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhcc--CccchHHHHHHHHHHHhcccccc---ccCceecccccccEEEecCCeEEEeecc
Confidence 999999999764 45999999554 45999999999999999999999 8999999999999999999999999999
Q ss_pred CcccCCCCCCccccccccCCCcccChhhhccCCCC-chhhHHHHHHHHHHHHhCCCCCC
Q 042216 623 LCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLT-EKSDVYSFGVVLLEVLCARPPIL 680 (767)
Q Consensus 623 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~ksDV~SfGvvl~elltg~~P~~ 680 (767)
.+.+. +.......+||.+|.|||++.+.+|- ..-|||++|++||.++....||.
T Consensus 716 saa~~----ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 716 SAAYT----KSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred chhhh----cCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 98753 33345667899999999999988764 56899999999999999988885
No 399
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.94 E-value=2.2e-27 Score=257.09 Aligned_cols=253 Identities=23% Similarity=0.337 Sum_probs=204.8
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecC
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYM 554 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~ 554 (767)
.+|..+..+|.|.+|.|||++.+..++..|+|.++........-.++|+-+++..+||||+.++|-+...+.++++||||
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEyc 94 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYC 94 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEec
Confidence 46777789999999999999999889999999998776666777889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcc
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTH 634 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~ 634 (767)
.+|+|.+.-+. ..+|++.++...|+...+||+||| +.+-+|||||-.|||+++.+.+|++|||.+..... .-.
T Consensus 95 gggslQdiy~~--TgplselqiayvcRetl~gl~ylh---s~gk~hRdiKGanilltd~gDvklaDfgvsaqita--ti~ 167 (829)
T KOG0576|consen 95 GGGSLQDIYHV--TGPLSELQIAYVCRETLQGLKYLH---SQGKIHRDIKGANILLTDEGDVKLADFGVSAQITA--TIA 167 (829)
T ss_pred CCCcccceeee--cccchhHHHHHHHhhhhccchhhh---cCCcccccccccceeecccCceeecccCchhhhhh--hhh
Confidence 99999997743 457999999999999999999999 78889999999999999999999999999754321 112
Q ss_pred ccccccCCCcccChhhhc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccc
Q 042216 635 VSTQVKGSIGYLDPEYYR---LQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFL 711 (767)
Q Consensus 635 ~~~~~~gt~~y~aPE~~~---~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 711 (767)
......||+.|||||+.. .+.|..++|||+.|+...|+---++|....-.. ..+...... ..++--
T Consensus 168 KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm--r~l~LmTkS---------~~qpp~ 236 (829)
T KOG0576|consen 168 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM--RALFLMTKS---------GFQPPT 236 (829)
T ss_pred hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH--HHHHHhhcc---------CCCCCc
Confidence 234567999999999763 567999999999999999998888886443221 111111111 111111
Q ss_pred cCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 712 KGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 712 ~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
-.......+.+.++++.|+-.+|++||+++.++.
T Consensus 237 -lkDk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 237 -LKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred -ccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 1123456778899999999999999999987763
No 400
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=2.4e-26 Score=224.88 Aligned_cols=258 Identities=17% Similarity=0.258 Sum_probs=194.4
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhcc-ccceeeeEeee-eecCCceEEEE
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQL-RYLHLVSLIGY-CNDDGQMILVY 551 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~-~~~~~~~~lV~ 551 (767)
.+.|.+.+.||+|.||.+-++.+++.++.+++|-+... ....++|.+|...--.| .|.||+.-++. +...+..++++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q 101 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ 101 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence 34678888999999999999999999999999987533 34467899998776666 58899988765 45667888999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEEC--CCCcEEEeecCCcccCCC
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLD--EEWVAKVSDFGLCKFGPN 629 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld--~~~~~ki~DfGla~~~~~ 629 (767)
||++.|+|.+-+.. ..+-+....+++.|++.||.|+| +..+||||||.+||||- +..++||||||+.+...
T Consensus 102 E~aP~gdL~snv~~---~GigE~~~K~v~~ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g- 174 (378)
T KOG1345|consen 102 EFAPRGDLRSNVEA---AGIGEANTKKVFAQLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVG- 174 (378)
T ss_pred ccCccchhhhhcCc---ccccHHHHHHHHHHHHHHHHHhh---ccchhhcccccceEEEecCCccEEEeeecccccccC-
Confidence 99999999988743 34788889999999999999999 88999999999999993 34589999999987422
Q ss_pred CCCccccccccCCCcccChhhhccC-----CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcc
Q 042216 630 FSKTHVSTQVKGSIGYLDPEYYRLQ-----LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIG 704 (767)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~ 704 (767)
.......-+..|.+||..... ...+.+|+|.||++++.++||++||..... .+-..|-+..+..+...
T Consensus 175 ----~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~---~d~~Y~~~~~w~~rk~~ 247 (378)
T KOG1345|consen 175 ----TTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASI---MDKPYWEWEQWLKRKNP 247 (378)
T ss_pred ----ceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhc---cCchHHHHHHHhcccCc
Confidence 122233456789999977532 356789999999999999999999973322 22233444445444433
Q ss_pred ccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 042216 705 DIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVF 752 (767)
Q Consensus 705 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~ 752 (767)
.+.+. + ...+++++++.++-+.+++++|=...++.++-....
T Consensus 248 ~~P~~-----F-~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w 289 (378)
T KOG1345|consen 248 ALPKK-----F-NPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLW 289 (378)
T ss_pred cCchh-----h-cccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHH
Confidence 22211 1 123566788889999999999977777766655544
No 401
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.93 E-value=2e-26 Score=231.05 Aligned_cols=255 Identities=22% Similarity=0.266 Sum_probs=192.8
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeecC------Cc
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDD------GQ 546 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~------~~ 546 (767)
.+|..+..+|.|.- .|..+...-.+++||+|++... .....+.-.+|...+..+.|+|+++++.++... .+
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 45666777888888 6666666556689999987543 334456678999999999999999999998543 47
Q ss_pred eEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCccc
Q 042216 547 MILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKF 626 (767)
Q Consensus 547 ~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~ 626 (767)
.|+|||+|.. +|.+.++ -.++...+..|..|++.|++||| +.+|+||||||+||++..++.+||.|||+++.
T Consensus 96 ~y~v~e~m~~-nl~~vi~----~elDH~tis~i~yq~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 96 VYLVMELMDA-NLCQVIL----MELDHETISYILYQMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLKILDFGLART 167 (369)
T ss_pred HHHHHHhhhh-HHHHHHH----HhcchHHHHHHHHHHHHHHHHHH---hcceeecccCcccceecchhheeeccchhhcc
Confidence 8999999975 9998886 24788899999999999999999 88999999999999999999999999999985
Q ss_pred CCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCc---
Q 042216 627 GPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKI--- 703 (767)
Q Consensus 627 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~--- 703 (767)
... .-..+....|..|.|||++.+..+.+..||||.||++.||++|+.-|.+.+. +..|..-.-..|..
T Consensus 168 e~~---~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~-----idQ~~ki~~~lgtpd~~ 239 (369)
T KOG0665|consen 168 EDT---DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDH-----IDQWNKIIEQLGTPDPS 239 (369)
T ss_pred cCc---ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchH-----HHHHHHHHHHhcCCCHH
Confidence 322 2345666788899999999988899999999999999999999988864432 22221111110000
Q ss_pred ------------------------cc-cccccccC--CCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 704 ------------------------GD-IIDPFLKG--NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 704 ------------------------~~-~~d~~l~~--~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.+ +-|..... +.+......+.+++.+||..+|++|-+++++|+
T Consensus 240 F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 240 FMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred HHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 00 00110100 111223445788999999999999999999985
No 402
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.93 E-value=3.4e-26 Score=218.66 Aligned_cols=256 Identities=21% Similarity=0.326 Sum_probs=192.6
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccc-cceeeeEeeeeecC--CceEEE
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLR-YLHLVSLIGYCNDD--GQMILV 550 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~-Hpniv~l~g~~~~~--~~~~lV 550 (767)
.++|+..+.+|+|.++.|+.|..-.+.+.++||++++. ..+.+.+|+.+|..|+ ||||++|++...+. ....||
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 35788888999999999999998777789999999854 3457889999999997 99999999998764 467899
Q ss_pred EecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECC-CCcEEEeecCCcccCCC
Q 042216 551 YDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDE-EWVAKVSDFGLCKFGPN 629 (767)
Q Consensus 551 ~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~-~~~~ki~DfGla~~~~~ 629 (767)
+||+.+-+...+. +.|+...+...+.+++.||.|+| +.||.|||+||.|++||. .-..+|+|+|||.+...
T Consensus 114 FE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp 185 (338)
T KOG0668|consen 114 FEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 185 (338)
T ss_pred hhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHH---hcCcccccCCcceeeechhhceeeeeecchHhhcCC
Confidence 9999997776654 34677788889999999999999 899999999999999995 55789999999987543
Q ss_pred CCCccccccccCCCcccChhhhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHH--------hhc
Q 042216 630 FSKTHVSTQVKGSIGYLDPEYYR-LQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATEC--------YRN 700 (767)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~--------~~~ 700 (767)
...- ...+.+..|.-||.+- .+.|+..-|+|||||+|.+|+..+.||....+.. .+++..+.-. +.+
T Consensus 186 ~~eY---nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~-DQLVkIakVLGt~el~~Yl~K 261 (338)
T KOG0668|consen 186 GKEY---NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY-DQLVKIAKVLGTDELYAYLNK 261 (338)
T ss_pred Ccee---eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCH-HHHHHHHHHhChHHHHHHHHH
Confidence 2221 2233456678899875 4678899999999999999999999985433221 2222221100 000
Q ss_pred CCccccccccccC----------------CCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 701 GKIGDIIDPFLKG----------------NAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 701 ~~~~~~~d~~l~~----------------~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
-.+ .+|+.+.+ .-..-...+.++++...|..|-++|||+.|...
T Consensus 262 Y~i--~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 262 YQI--DLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred Hcc--CCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 000 02222111 001113467889999999999999999999874
No 403
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=6e-25 Score=230.90 Aligned_cols=132 Identities=25% Similarity=0.372 Sum_probs=114.1
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccc-----c---ceeeeEeeeeecC--
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLR-----Y---LHLVSLIGYCNDD-- 544 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~-----H---pniv~l~g~~~~~-- 544 (767)
.+|...++||-|.|++||++....+.+-||+|+.+.. +.-.+.-+.||++|++++ | .+||+|++++...
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 5788888999999999999999999999999998743 233445688999999884 2 3899999999753
Q ss_pred --CceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEE
Q 042216 545 --GQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILL 610 (767)
Q Consensus 545 --~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILl 610 (767)
.+++||+|++.. +|..+|....-+.++...+.+||.||+.||.|||+.| +|||-||||+|||+
T Consensus 157 NG~HVCMVfEvLGd-nLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 157 NGQHVCMVFEVLGD-NLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred CCcEEEEEehhhhh-HHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 589999999954 9999998877778999999999999999999999854 89999999999999
No 404
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.92 E-value=1.2e-25 Score=219.76 Aligned_cols=246 Identities=20% Similarity=0.331 Sum_probs=196.7
Q ss_pred eeeccCcEEEEEEEecCCCceEEEEEeCCC--CCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCCh
Q 042216 482 IIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGTL 559 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gsL 559 (767)
+|.+...|..|+|++.+. .+++|++... .....++|..|.-.|+.+.||||++++|.|....++.++..||+.|||
T Consensus 197 kl~e~hsgelwrgrwqgn--divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gsl 274 (448)
T KOG0195|consen 197 KLAESHSGELWRGRWQGN--DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSL 274 (448)
T ss_pred hhccCCCcccccccccCc--chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHH
Confidence 588899999999999865 4666766432 344456799999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccccc
Q 042216 560 RDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQV 639 (767)
Q Consensus 560 ~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~ 639 (767)
...|++...-..+..+..+++.++|+||+|||+.. +-|.---|.+..|++|++.+++|+- +-+++. -.....
T Consensus 275 ynvlhe~t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarism-ad~kfs------fqe~gr 346 (448)
T KOG0195|consen 275 YNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISM-ADTKFS------FQEVGR 346 (448)
T ss_pred HHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheec-ccceee------eecccc
Confidence 99999888778899999999999999999999643 3344556899999999999998851 111110 011112
Q ss_pred cCCCcccChhhhccCCCC---chhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCC
Q 042216 640 KGSIGYLDPEYYRLQLLT---EKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAP 716 (767)
Q Consensus 640 ~gt~~y~aPE~~~~~~~s---~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 716 (767)
.-.+.||+||.+..++-+ ..+|+|||.++||||.|...||......+... ++.-..++-..|
T Consensus 347 ~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgm---------------kialeglrv~ip 411 (448)
T KOG0195|consen 347 AYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGM---------------KIALEGLRVHIP 411 (448)
T ss_pred ccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhh---------------hhhhccccccCC
Confidence 345789999999876543 57899999999999999999997766543221 112234666778
Q ss_pred hhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 042216 717 PVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVF 752 (767)
Q Consensus 717 ~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~ 752 (767)
+..+..+.+++.-|+..||.+||.+..|+-.||++.
T Consensus 412 pgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 412 PGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred CCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 888999999999999999999999999999999864
No 405
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.92 E-value=8.7e-26 Score=237.96 Aligned_cols=265 Identities=20% Similarity=0.225 Sum_probs=199.9
Q ss_pred HhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccc------cceeeeEeeeeecCCc
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLR------YLHLVSLIGYCNDDGQ 546 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~------Hpniv~l~g~~~~~~~ 546 (767)
.-..|......|+|-|++|.+|.....++.||||++..+ +.-.+.=+.|+++|.+|. --|+++|+..+...++
T Consensus 430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH 508 (752)
T KOG0670|consen 430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH 508 (752)
T ss_pred hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce
Confidence 345777777899999999999998877789999999754 223344578999999995 2488999999999999
Q ss_pred eEEEEecCCCCChhhhhccC-CCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCC-cEEEeecCCc
Q 042216 547 MILVYDYMARGTLRDHLYNN-DNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEW-VAKVSDFGLC 624 (767)
Q Consensus 547 ~~lV~ey~~~gsL~~~L~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~-~~ki~DfGla 624 (767)
+|||+|-+.. +|.+.|++- .+-.|....+..++.|+.-||..|- ..+|+|.||||.|||+++.- .+||||||.|
T Consensus 509 LClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA 584 (752)
T KOG0670|consen 509 LCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVNESKNILKLCDFGSA 584 (752)
T ss_pred eEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHH---hcCeeecccCccceEeccCcceeeeccCccc
Confidence 9999998865 999999753 3446888999999999999999999 77899999999999998754 6799999998
Q ss_pred ccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHh-----h
Q 042216 625 KFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECY-----R 699 (767)
Q Consensus 625 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~-----~ 699 (767)
....... + +....+.-|.|||++.+-.|+...|+||.||+||||.||+.-|.+........+..-+...+ .
T Consensus 585 ~~~~ene---i-tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlR 660 (752)
T KOG0670|consen 585 SFASENE---I-TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLR 660 (752)
T ss_pred ccccccc---c-cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhh
Confidence 7543321 1 11223456999999999999999999999999999999999997766544333332221111 1
Q ss_pred cCC-ccccccccc--------------------------------cC--CC---ChhhHHHHHHHHHHccccCCCCCCCH
Q 042216 700 NGK-IGDIIDPFL--------------------------------KG--NA---PPVCLNQFVEVAMSCVNDDRIRRPSM 741 (767)
Q Consensus 700 ~~~-~~~~~d~~l--------------------------------~~--~~---~~~~~~~l~~li~~Cl~~dp~~RPs~ 741 (767)
.+. ..+.+|..+ .+ .. .+....+|.+|+..|+..||++|.|.
T Consensus 661 KgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~ 740 (752)
T KOG0670|consen 661 KGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITV 740 (752)
T ss_pred hcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCH
Confidence 111 111122210 00 01 12345668899999999999999999
Q ss_pred HHHHH
Q 042216 742 SDVVW 746 (767)
Q Consensus 742 ~evl~ 746 (767)
.+.|.
T Consensus 741 nqAL~ 745 (752)
T KOG0670|consen 741 NQALK 745 (752)
T ss_pred HHHhc
Confidence 99874
No 406
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.91 E-value=4.1e-25 Score=266.44 Aligned_cols=197 Identities=18% Similarity=0.202 Sum_probs=139.5
Q ss_pred hcccc-ceeeeEeeee-------ecCCceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCe
Q 042216 527 SQLRY-LHLVSLIGYC-------NDDGQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVI 598 (767)
Q Consensus 527 ~~l~H-pniv~l~g~~-------~~~~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 598 (767)
+.++| +||.+++++| .+...+++++||+ +++|.++|... ...+++.+++.++.||++||.||| +++|
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH---~~gI 101 (793)
T PLN00181 27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAH---SQGI 101 (793)
T ss_pred chhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 34556 6888888887 2334678888988 45999999643 345999999999999999999999 7889
Q ss_pred EecCCCCCCeEECCC-------------------CcEEEeecCCcccCCCCCC--------------ccccccccCCCcc
Q 042216 599 IHRDVKTTNILLDEE-------------------WVAKVSDFGLCKFGPNFSK--------------THVSTQVKGSIGY 645 (767)
Q Consensus 599 iH~Dlk~~NILld~~-------------------~~~ki~DfGla~~~~~~~~--------------~~~~~~~~gt~~y 645 (767)
+||||||+||||+.. +.+|++|||+++....... ........||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 999999999999654 4555666666543211000 0001123578889
Q ss_pred cChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHH
Q 042216 646 LDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVE 725 (767)
Q Consensus 646 ~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~ 725 (767)
||||++.+..++.++|||||||+||||++|.+|+..... ....+... ...+. ......+...
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~----~~~~~~~~---------~~~~~-----~~~~~~~~~~ 243 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR----TMSSLRHR---------VLPPQ-----ILLNWPKEAS 243 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH----HHHHHHHh---------hcChh-----hhhcCHHHHH
Confidence 999999999999999999999999999999888632110 11111000 01110 0112334568
Q ss_pred HHHHccccCCCCCCCHHHHHH
Q 042216 726 VAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 726 li~~Cl~~dp~~RPs~~evl~ 746 (767)
++.+||+.+|.+||+|.||++
T Consensus 244 ~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 244 FCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHhCCCChhhCcChHHHhh
Confidence 889999999999999999985
No 407
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.90 E-value=1.2e-23 Score=206.40 Aligned_cols=169 Identities=25% Similarity=0.289 Sum_probs=126.8
Q ss_pred CChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcccc
Q 042216 557 GTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVS 636 (767)
Q Consensus 557 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~ 636 (767)
|+|.+++... ...++|.+++.|+.|++.||.||| +.+ ||+|||++.++.+|+ ||+++.....
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~------ 62 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTPE------ 62 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeeccc------
Confidence 7899999653 346999999999999999999999 443 999999999999999 9998764321
Q ss_pred ccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCC
Q 042216 637 TQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAP 716 (767)
Q Consensus 637 ~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 716 (767)
...|++.|||||++.+..++.++|||||||++|||++|+.||....... ..+..+.... ... ++.. ...+
T Consensus 63 -~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~-~~~~~~~~~~-~~~------~~~~-~~~~ 132 (176)
T smart00750 63 -QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELS-AILEILLNGM-PAD------DPRD-RSNL 132 (176)
T ss_pred -cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhc-HHHHHHHHHh-ccC------Cccc-cccH
Confidence 1258899999999999999999999999999999999999985433211 1111111111 110 0000 0111
Q ss_pred hhhHH--HHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 042216 717 PVCLN--QFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQ 753 (767)
Q Consensus 717 ~~~~~--~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~ 753 (767)
..... ++.+++.+||+.+|.+||++.|+++.+..+..
T Consensus 133 ~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 133 ESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred HHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 22233 68999999999999999999999999877654
No 408
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.90 E-value=6.1e-24 Score=221.04 Aligned_cols=264 Identities=23% Similarity=0.320 Sum_probs=195.0
Q ss_pred HHhhccccceeeeccCcEEEEEEEecC---CCceEEEEEeCCCCCcchhHHHHHHHHHhccc-cceeeeEeeeeecCCce
Q 042216 472 EATKDFNNLLIIGRGGFGNVYKGFLNG---DSTPVAIKRLNPGSQQGALEFQTEIGMLSQLR-YLHLVSLIGYCNDDGQM 547 (767)
Q Consensus 472 ~~t~~f~~~~~LG~G~fG~Vy~g~~~~---~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~-Hpniv~l~g~~~~~~~~ 547 (767)
...+.|..+++||+|.|++||++++.. ....||+|.+...+. .....+|+++|..+. +.||+++.++...++..
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v 110 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRNNDQV 110 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhccCCee
Confidence 345678888999999999999998866 567899999875543 346889999999994 89999999999999999
Q ss_pred EEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEEC-CCCcEEEeecCCccc
Q 042216 548 ILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLD-EEWVAKVSDFGLCKF 626 (767)
Q Consensus 548 ~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld-~~~~~ki~DfGla~~ 626 (767)
.+|+||+++-...+++.. ++..++...++.+..||.++| .++||||||||+|+|.+ ..+.-.|.||||+..
T Consensus 111 ~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~ 182 (418)
T KOG1167|consen 111 AIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQR 182 (418)
T ss_pred EEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhh---ccCccccCCCccccccccccCCceEEechhHHH
Confidence 999999999999888743 668889999999999999999 89999999999999997 456778999999861
Q ss_pred CCC--------------CC----------------------------CccccccccCCCcccChhhhc-cCCCCchhhHH
Q 042216 627 GPN--------------FS----------------------------KTHVSTQVKGSIGYLDPEYYR-LQLLTEKSDVY 663 (767)
Q Consensus 627 ~~~--------------~~----------------------------~~~~~~~~~gt~~y~aPE~~~-~~~~s~ksDV~ 663 (767)
... .. .........||+||.|||++. ...-++++|||
T Consensus 183 ~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiw 262 (418)
T KOG1167|consen 183 YDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIW 262 (418)
T ss_pred HHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcccee
Confidence 000 00 000011245999999999875 56778999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCCccchhHHHHHH---------HHhhcCC--ccc---------c------cc-ccccC-C-
Q 042216 664 SFGVVLLEVLCARPPILRTGDKKQVNLAVWAT---------ECYRNGK--IGD---------I------ID-PFLKG-N- 714 (767)
Q Consensus 664 SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~---------~~~~~~~--~~~---------~------~d-~~l~~-~- 714 (767)
|.||+++-+++++.||....+.- ..+.+.+. .....|. +.+ + ++ ..+.. .
T Consensus 263 s~GVI~Lslls~~~PFf~a~dd~-~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q 341 (418)
T KOG1167|consen 263 SAGVILLSLLSRRYPFFKAKDDA-DALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQ 341 (418)
T ss_pred eccceeehhhccccccccCcccc-chHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccc
Confidence 99999999999999996543321 11111110 0001111 000 0 00 00000 0
Q ss_pred -------CChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 715 -------APPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 715 -------~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
.....+..+++++.+|+..||.+|.|+++.|+
T Consensus 342 ~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 342 PNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred cceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 01112346889999999999999999999984
No 409
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=4.2e-22 Score=214.58 Aligned_cols=168 Identities=21% Similarity=0.179 Sum_probs=129.1
Q ss_pred HHHhhccccceeeeccCcEEEEEEEecC-CCceEEEEEeCCCC-----CcchhHHHHHHHHHhccccceeeeEeeeeecC
Q 042216 471 KEATKDFNNLLIIGRGGFGNVYKGFLNG-DSTPVAIKRLNPGS-----QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDD 544 (767)
Q Consensus 471 ~~~t~~f~~~~~LG~G~fG~Vy~g~~~~-~~~~vAVK~l~~~~-----~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~ 544 (767)
.....+|...+.||+|+||+||+|.++. +++.+|||++.... ....+.|.+|+++|++++|+|+++.+.. .
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~ 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---T 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---c
Confidence 3456789999999999999999998865 55778999875331 1224568999999999999999854322 2
Q ss_pred CceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCC-CCCCeEECCCCcEEEeecCC
Q 042216 545 GQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDV-KTTNILLDEEWVAKVSDFGL 623 (767)
Q Consensus 545 ~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dl-k~~NILld~~~~~ki~DfGl 623 (767)
+..+|||||+++++|... . .. . ...++.+++++|.||| +++|+|||| ||+|||++.++.+||+|||+
T Consensus 91 ~~~~LVmE~~~G~~L~~~-~-~~----~---~~~~~~~i~~aL~~lH---~~gIiHrDL~KP~NILv~~~~~ikLiDFGl 158 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHLA-R-PH----G---DPAWFRSAHRALRDLH---RAGITHNDLAKPQNWLMGPDGEAAVIDFQL 158 (365)
T ss_pred CCcEEEEEccCCCCHHHh-C-cc----c---hHHHHHHHHHHHHHHH---HCCCeeCCCCCcceEEEcCCCCEEEEECcc
Confidence 468999999999999632 1 11 1 1467889999999999 789999999 99999999999999999999
Q ss_pred cccCCCCCCccc------cccccCCCcccChhhhcc
Q 042216 624 CKFGPNFSKTHV------STQVKGSIGYLDPEYYRL 653 (767)
Q Consensus 624 a~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~ 653 (767)
++.......... .+...+++.|+|||++..
T Consensus 159 A~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 159 ASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred ceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 986543221111 134568888999998854
No 410
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.85 E-value=5.8e-20 Score=198.25 Aligned_cols=262 Identities=21% Similarity=0.192 Sum_probs=196.8
Q ss_pred ccccceeeeccCcEEEEEEEecCCC-ceEEEEEeCCCCCcchhHHHHHHHHHhcccc----ceeeeEeeee-ecCCceEE
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDS-TPVAIKRLNPGSQQGALEFQTEIGMLSQLRY----LHLVSLIGYC-NDDGQMIL 549 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~-~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H----pniv~l~g~~-~~~~~~~l 549 (767)
+|.....||+|+||.||++.....+ ..+|+|.-..........+..|+.++..+.+ +++..+++.. ..+...++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 7889999999999999999987653 5788887765433333367888888888863 5888888888 47778899
Q ss_pred EEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCC-----CcEEEeecCCc
Q 042216 550 VYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEE-----WVAKVSDFGLC 624 (767)
Q Consensus 550 V~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~-----~~~ki~DfGla 624 (767)
||+.+ +-+|.++........++..+.+.|+.|++.+|.+|| +.+++||||||.|+++... ..+.|.|||++
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHH---hcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99977 559999876555567999999999999999999999 8889999999999999865 46899999999
Q ss_pred c--cCCCCCCc---cc---cccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccch-hHHHHHH
Q 042216 625 K--FGPNFSKT---HV---STQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQV-NLAVWAT 695 (767)
Q Consensus 625 ~--~~~~~~~~---~~---~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~-~l~~~~~ 695 (767)
+ ........ .. .....||..|.++....+...+.+.|+||++.++.|++.|..||......... .+.....
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~ 254 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPR 254 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhh
Confidence 8 32111110 11 22355999999999999999999999999999999999999999554432211 1111100
Q ss_pred HHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 042216 696 ECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQL 754 (767)
Q Consensus 696 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~ 754 (767)
. ..... .....+.++.++...+-..+..++|....+...|+.+...
T Consensus 255 ~--------~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 255 K--------LLTDR-----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred h--------hcccc-----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 0 00000 1222345566666666668999999999999988777654
No 411
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.85 E-value=1.4e-19 Score=193.48 Aligned_cols=260 Identities=30% Similarity=0.419 Sum_probs=195.8
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCc---chhHHHHHHHHHhccccc-eeeeEeeeeecCCceEEEEe
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQ---GALEFQTEIGMLSQLRYL-HLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~---~~~~f~~Ei~~l~~l~Hp-niv~l~g~~~~~~~~~lV~e 552 (767)
|.....||.|+||.||++... ..+++|.+...... ....+.+|+.++..+.|+ +++++.+.+......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 456678999999999999987 67899998765333 366799999999999988 79999999977777899999
Q ss_pred cCCCCChhhhhccCCC-CCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCC-cEEEeecCCcccCCCC
Q 042216 553 YMARGTLRDHLYNNDN-PPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEW-VAKVSDFGLCKFGPNF 630 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~-~~ki~DfGla~~~~~~ 630 (767)
++.+++|.+++..... ..+.......++.+++.++.|+| ..+++|||+||+||+++... .++++|||+++.....
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence 9999999977654322 26889999999999999999999 67799999999999999988 7999999998754332
Q ss_pred CCcc----ccccccCCCcccChhhhcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCc-cchhHHHHHHHHhhcCC
Q 042216 631 SKTH----VSTQVKGSIGYLDPEYYRL---QLLTEKSDVYSFGVVLLEVLCARPPILRTGDK-KQVNLAVWATECYRNGK 702 (767)
Q Consensus 631 ~~~~----~~~~~~gt~~y~aPE~~~~---~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~-~~~~l~~~~~~~~~~~~ 702 (767)
.... ......|+..|+|||.+.. ...+...|+||+|++++++++|..|+...... ...............
T Consensus 156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-- 233 (384)
T COG0515 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP-- 233 (384)
T ss_pred CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc--
Confidence 2211 2356679999999999987 57889999999999999999999996444321 011111111111000
Q ss_pred ccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 703 IGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 703 ~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
.................+.+++..|+..+|..|.++.+....
T Consensus 234 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 234 ---SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ---ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 000000000002223567899999999999999998887764
No 412
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.84 E-value=1.3e-20 Score=206.25 Aligned_cols=219 Identities=25% Similarity=0.386 Sum_probs=165.5
Q ss_pred HhccccceeeeEeeeeecCCceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCC
Q 042216 526 LSQLRYLHLVSLIGYCNDDGQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKT 605 (767)
Q Consensus 526 l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~ 605 (767)
|+.+.|.|+.+++|.|.++...+.|.+||..|+|.+.+... ...++|.....+..+++.||.|||. ++-..|+.+++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~-~~~~d~~F~~s~~rdi~~Gl~ylh~--s~i~~hg~l~s 77 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE-DIKLDYFFILSFIRDISKGLAYLHN--SPIGYHGALKS 77 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc-ccCccHHHHHHHHHHHHHHHHHHhc--Ccceeeeeecc
Confidence 46789999999999999999999999999999999999764 3569999999999999999999995 44449999999
Q ss_pred CCeEECCCCcEEEeecCCcccCCCCCCccccccccCCCcccChhhhccC-------CCCchhhHHHHHHHHHHHHhCCCC
Q 042216 606 TNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQ-------LLTEKSDVYSFGVVLLEVLCARPP 678 (767)
Q Consensus 606 ~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~s~ksDV~SfGvvl~elltg~~P 678 (767)
+|+++|..+.+||+|||+..+..............-..-|.|||.+... ..+.+.||||||++++|+++.+.|
T Consensus 78 ~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~ 157 (484)
T KOG1023|consen 78 SNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP 157 (484)
T ss_pred ccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence 9999999999999999998765321111111222234569999998763 257789999999999999999999
Q ss_pred CCCCCCccch-hHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 042216 679 ILRTGDKKQV-NLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQL 754 (767)
Q Consensus 679 ~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~ 754 (767)
|......... .+...+.. .....+.|.+.... +..+++..++.+||..+|.+||++.+|-..++.+...
T Consensus 158 ~~~~~~~~~~~eii~~~~~-----~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 158 FDLRNLVEDPDEIILRVKK-----GGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred cccccccCChHHHHHHHHh-----cCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 9654332221 22222211 11122222222111 3444789999999999999999999999888877653
No 413
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83 E-value=3.6e-21 Score=220.76 Aligned_cols=254 Identities=19% Similarity=0.236 Sum_probs=187.8
Q ss_pred cceeeeccCcEEEEEEEecCCCceEEEEEeC----CC-CCcc-hhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEe
Q 042216 479 NLLIIGRGGFGNVYKGFLNGDSTPVAIKRLN----PG-SQQG-ALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 479 ~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~----~~-~~~~-~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~e 552 (767)
..+++|.|.+|.|+..+........+.|... .. .... ...+..|..+-..++|+|++..+..+.+.....-.||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 4457999999988887776555555555432 11 1111 1125667777788899999988888877777777799
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK 632 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~ 632 (767)
||+. +|..++... ..+.-.++..++.|+..|+.||| ..+|.|||+|++|+++..++.+||+|||.+.......+
T Consensus 402 ~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred cccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHH---hcCceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence 9999 999998554 35888899999999999999999 78899999999999999999999999999876544333
Q ss_pred c--cccccccCCCcccChhhhccCCCCch-hhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccc
Q 042216 633 T--HVSTQVKGSIGYLDPEYYRLQLLTEK-SDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDP 709 (767)
Q Consensus 633 ~--~~~~~~~gt~~y~aPE~~~~~~~s~k-sDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 709 (767)
. ......+|+..|+|||.+....|.+. .||||.|+++..|++|+.||......++.... .....-..+...
T Consensus 476 ~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~------~~~~~~~~~~~~ 549 (601)
T KOG0590|consen 476 KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKT------NNYSDQRNIFEG 549 (601)
T ss_pred hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhh------hccccccccccC
Confidence 3 55667889999999999999998875 89999999999999999999554333222100 000000000000
Q ss_pred cccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 710 FLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 710 ~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
........+.+...++.++|+.||.+|-|+++|++
T Consensus 550 --~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 550 --PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred --hHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 00111234556788999999999999999999974
No 414
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.80 E-value=2.6e-20 Score=212.33 Aligned_cols=248 Identities=21% Similarity=0.252 Sum_probs=180.6
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC-CCcchhHHHHHHHH--HhccccceeeeEeeeeecCCceEEEEe
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG-SQQGALEFQTEIGM--LSQLRYLHLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~-~~~~~~~f~~Ei~~--l~~l~Hpniv~l~g~~~~~~~~~lV~e 552 (767)
++...+.||++.|=+|.+++++++ .|+||++-+. ..-..+.|.++++- ...++|||.+++..+-..+...|||-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG--~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREG--LVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCc--eEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 566667899999999999999865 3899988544 34445555554433 445589999999988888888899999
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCccc--CCCC
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKF--GPNF 630 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~--~~~~ 630 (767)
|..+ +|.|.| ..++-|...+...|+.|++.||.-+| ..+|+|||||.+||||+.-.-+.|+||.--+. .+++
T Consensus 102 yvkh-nLyDRl--STRPFL~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 102 YVKH-NLYDRL--STRPFLVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred HHhh-hhhhhh--ccchHHHHHHHHHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhhhhcccccCCccCCCC
Confidence 9987 999998 55666888899999999999999999 78899999999999999988999999987542 2221
Q ss_pred CCc---cccccccCCCcccChhhhccC-----------CCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHH
Q 042216 631 SKT---HVSTQVKGSIGYLDPEYYRLQ-----------LLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWAT 695 (767)
Q Consensus 631 ~~~---~~~~~~~gt~~y~aPE~~~~~-----------~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~ 695 (767)
... .-......-.+|+|||.+... .++++.||||+||+++||++ |+++|.- .+|..
T Consensus 176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L------SQL~a--- 246 (1431)
T KOG1240|consen 176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL------SQLLA--- 246 (1431)
T ss_pred CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH------HHHHh---
Confidence 111 111223344689999977431 27789999999999999998 7888721 11111
Q ss_pred HHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 042216 696 ECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWG 747 (767)
Q Consensus 696 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~ 747 (767)
++.+. .......|.. . +...+.++++.|++.||.+|.++++.|+.
T Consensus 247 --Yr~~~-~~~~e~~Le~-I---ed~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 247 --YRSGN-ADDPEQLLEK-I---EDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred --HhccC-ccCHHHHHHh-C---cCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 11111 0000000100 0 11246789999999999999999999977
No 415
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.78 E-value=6.9e-19 Score=174.45 Aligned_cols=137 Identities=16% Similarity=0.185 Sum_probs=105.9
Q ss_pred eeeeccCcEEEEEEEecCCCceEEEEEeCCCCCc--c-------hhHH-----------------HHHHHHHhcccccee
Q 042216 481 LIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQ--G-------ALEF-----------------QTEIGMLSQLRYLHL 534 (767)
Q Consensus 481 ~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~--~-------~~~f-----------------~~Ei~~l~~l~Hpni 534 (767)
..||+|+||.||+|... +++.||||+++..... . ...| ..|++.+.++.++++
T Consensus 3 ~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 3 GCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 47999999999999987 6789999999754211 1 1122 349999999987766
Q ss_pred eeEeeeeecCCceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHh-HhCCCCCeEecCCCCCCeEECCC
Q 042216 535 VSLIGYCNDDGQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYL-HTGASKVIIHRDVKTTNILLDEE 613 (767)
Q Consensus 535 v~l~g~~~~~~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~iiH~Dlk~~NILld~~ 613 (767)
.....+. ....+|||||+++++|...+.. ...+++.+...++.|++.+|.+| | ..+|+||||||+|||+++
T Consensus 82 ~~p~~~~--~~~~~iVmE~i~g~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~l~H---~~giiHrDlkP~NIli~~- 153 (190)
T cd05147 82 PCPEPIL--LKSHVLVMEFIGDDGWAAPRLK--DAPLSESKARELYLQVIQIMRILYQ---DCRLVHADLSEYNLLYHD- 153 (190)
T ss_pred CCCcEEE--ecCCEEEEEEeCCCCCcchhhh--cCCCCHHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEEC-
Confidence 4332222 1234899999999877655322 24688999999999999999999 6 678999999999999984
Q ss_pred CcEEEeecCCccc
Q 042216 614 WVAKVSDFGLCKF 626 (767)
Q Consensus 614 ~~~ki~DfGla~~ 626 (767)
+.++|+|||++..
T Consensus 154 ~~v~LiDFG~a~~ 166 (190)
T cd05147 154 GKLYIIDVSQSVE 166 (190)
T ss_pred CcEEEEEcccccc
Confidence 7899999999874
No 416
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.78 E-value=5.4e-19 Score=177.38 Aligned_cols=171 Identities=12% Similarity=0.088 Sum_probs=131.4
Q ss_pred HhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhH---------HHHHHHHHhccccceeeeEeeeeec
Q 042216 473 ATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALE---------FQTEIGMLSQLRYLHLVSLIGYCND 543 (767)
Q Consensus 473 ~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~---------f~~Ei~~l~~l~Hpniv~l~g~~~~ 543 (767)
..++|...++||.|+||.||+.... +..+|||.+.+........ +.+|++.+.+++|++|..+..+...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~~--~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDTD--YGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEecC--CCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 3578999999999999999997553 4579999997653322222 6789999999999999999887542
Q ss_pred C--------CceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCc
Q 042216 544 D--------GQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWV 615 (767)
Q Consensus 544 ~--------~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~ 615 (767)
. +..+|+|||++|.+|.++.. ++. ....+++.+|..|| ..+++|||+||+|++++.++
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH---~~gi~H~Dikp~Nili~~~g- 172 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLH---QHGMVSGDPHKGNFIVSKNG- 172 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHH---HcCCccCCCChHHEEEeCCC-
Confidence 2 46899999999999988741 222 34568999999999 78899999999999999988
Q ss_pred EEEeecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHH
Q 042216 616 AKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVL 673 (767)
Q Consensus 616 ~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ell 673 (767)
++|+|||........... ..+.....+..++|+|+||+++..+.
T Consensus 173 i~liDfg~~~~~~e~~a~--------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 LRIIDLSGKRCTAQRKAK--------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEEECCCcccccchhhH--------------HHHHHHhHhcccccccceeEeehHHH
Confidence 999999987643211100 11344455667999999999987653
No 417
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.77 E-value=2.5e-18 Score=177.74 Aligned_cols=233 Identities=18% Similarity=0.232 Sum_probs=149.9
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC---CCcchhHHHHHHHHHhccc----------cceeeeEeeeee
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG---SQQGALEFQTEIGMLSQLR----------YLHLVSLIGYCN 542 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~----------Hpniv~l~g~~~ 542 (767)
.+.....||.|+++.||.+++.++++.+|||+.... .....+++.+|.-....+. |-.++-.++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 345566899999999999999999999999987433 2334556666665444432 222222222221
Q ss_pred ---------cC---C-----ceEEEEecCCCCChhhhhc---cC--CCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEe
Q 042216 543 ---------DD---G-----QMILVYDYMARGTLRDHLY---NN--DNPPLPWDRRLKICIGAARALHYLHTGASKVIIH 600 (767)
Q Consensus 543 ---------~~---~-----~~~lV~ey~~~gsL~~~L~---~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH 600 (767)
.. . ..+++|+-+. ++|.+++. .. ....+....++.+..|+++.+++|| ..+++|
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh---~~GlVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLH---SYGLVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHh---hcceEe
Confidence 11 1 3467888774 48887753 21 1224556677888899999999999 788999
Q ss_pred cCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccccccCCCcccChhhhccC--------CCCchhhHHHHHHHHHHH
Q 042216 601 RDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQ--------LLTEKSDVYSFGVVLLEV 672 (767)
Q Consensus 601 ~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--------~~s~ksDV~SfGvvl~el 672 (767)
+||||+|+|++.+|.++|+||+....... ... ....+..|.+||..... .++.+.|.|++|+++|.|
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~----~~~-~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~l 243 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGT----RYR-CSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSL 243 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTE----EEE-GGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCc----eee-ccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHH
Confidence 99999999999999999999987653221 111 13355789999977542 578899999999999999
Q ss_pred HhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCC
Q 042216 673 LCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRR 738 (767)
Q Consensus 673 ltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~R 738 (767)
+||+.||........... .-..+. +.++.+..|+..+|+.+|.+|
T Consensus 244 WC~~lPf~~~~~~~~~~~--------------------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 244 WCGRLPFGLSSPEADPEW--------------------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHSS-STCCCGGGSTSGG--------------------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HHccCCCCCCCccccccc--------------------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 999999965433211100 112233 667889999999999999988
No 418
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.77 E-value=6.3e-18 Score=163.56 Aligned_cols=263 Identities=19% Similarity=0.208 Sum_probs=192.1
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhcccc-ceeeeEeeeeecCCceEEEEe
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRY-LHLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H-pniv~l~g~~~~~~~~~lV~e 552 (767)
..+|..++.||+|+||.+|.|..-..+..||||.-+... ..-++..|.++...|+| ..|..+..|..++..-.|||+
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd 91 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD 91 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence 467889999999999999999998888999999865432 23356788888888875 566677778888888999999
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCC---CcEEEeecCCcccCCC
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEE---WVAKVSDFGLCKFGPN 629 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~---~~~ki~DfGla~~~~~ 629 (767)
.+ +-||.++..-.. ..++.++.+-++-|++.-++|+| .++.+||||||+|.|+.-+ ..+.++||||++....
T Consensus 92 LL-GPsLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 92 LL-GPSLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred cc-CccHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHH---hhccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 88 448888764333 35888899999999999999999 7779999999999999743 4688999999985433
Q ss_pred CCC-cc----ccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcc
Q 042216 630 FSK-TH----VSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIG 704 (767)
Q Consensus 630 ~~~-~~----~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~ 704 (767)
... .+ ......||.+|.+-....+-.-+..-|+=|+|.+|..+-.|..||.+.......+-.+...+. ++.
T Consensus 167 ~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~Ek----K~s 242 (341)
T KOG1163|consen 167 IRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEK----KMS 242 (341)
T ss_pred ccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHh----hcC
Confidence 211 11 123456999999888777777788899999999999999999999877554333322222221 111
Q ss_pred ccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 042216 705 DIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVF 752 (767)
Q Consensus 705 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~ 752 (767)
-.+. .+ ....+.++...+.-|-..--++-|.-.-+.+.+.-+.
T Consensus 243 ~~ie-~L----C~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLf 285 (341)
T KOG1163|consen 243 TPIE-VL----CKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILF 285 (341)
T ss_pred CCHH-HH----hCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHH
Confidence 1111 11 1223556777777787777777787666555544443
No 419
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.76 E-value=5.9e-18 Score=168.26 Aligned_cols=141 Identities=16% Similarity=0.096 Sum_probs=108.7
Q ss_pred ceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcc--------------------------hhHHHHHHHHHhccccce
Q 042216 480 LLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQG--------------------------ALEFQTEIGMLSQLRYLH 533 (767)
Q Consensus 480 ~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~--------------------------~~~f~~Ei~~l~~l~Hpn 533 (767)
...||+|++|.||+|... +++.||||+++...... ...+..|.+.+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 357999999999999987 67899999987652110 111357889999999988
Q ss_pred eeeEeeeeecCCceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCC
Q 042216 534 LVSLIGYCNDDGQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEE 613 (767)
Q Consensus 534 iv~l~g~~~~~~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~ 613 (767)
+.....+... ..+|||||++++++...+.. ...++..+...++.+++.++.+||+ ..+|+||||||+|||++ +
T Consensus 81 i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~--~~~~~~~~~~~i~~~l~~~l~~lH~--~~givHrDlkP~NIll~-~ 153 (190)
T cd05145 81 VPVPEPILLK--KNVLVMEFIGDDGSPAPRLK--DVPLEEEEAEELYEQVVEQMRRLYQ--EAGLVHGDLSEYNILYH-D 153 (190)
T ss_pred CCCceEEEec--CCEEEEEEecCCCchhhhhh--hccCCHHHHHHHHHHHHHHHHHHHH--hCCEecCCCChhhEEEE-C
Confidence 7544333322 34899999998865443222 2357788999999999999999993 27899999999999999 7
Q ss_pred CcEEEeecCCcccCC
Q 042216 614 WVAKVSDFGLCKFGP 628 (767)
Q Consensus 614 ~~~ki~DfGla~~~~ 628 (767)
+.++|+|||++....
T Consensus 154 ~~~~liDFG~a~~~~ 168 (190)
T cd05145 154 GKPYIIDVSQAVELD 168 (190)
T ss_pred CCEEEEEcccceecC
Confidence 899999999987543
No 420
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.76 E-value=9.1e-18 Score=164.92 Aligned_cols=190 Identities=17% Similarity=0.100 Sum_probs=141.6
Q ss_pred ccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcc----hhHHHHHHHHHhccc-cceeeeEeeeeecCCceEEEEe
Q 042216 478 NNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQG----ALEFQTEIGMLSQLR-YLHLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 478 ~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~----~~~f~~Ei~~l~~l~-Hpniv~l~g~~~~~~~~~lV~e 552 (767)
.....|++|+||+||.+.. .+.+++.+.+....... ...+.+|+++|++|+ |+++.+++++ +..+++||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme 78 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS 78 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence 3456899999999997765 34678877776543211 124789999999995 5788898886 35799999
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCC-CCCCeEECCCCcEEEeecCCcccCCCCC
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDV-KTTNILLDEEWVAKVSDFGLCKFGPNFS 631 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dl-k~~NILld~~~~~ki~DfGla~~~~~~~ 631 (767)
|+.+.+|.+.+.. ....++.+++++|.++| ..+|+|||| ||+|||++.++.++|+|||++.......
T Consensus 79 yI~G~~L~~~~~~---------~~~~~~~qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 79 YLAGAAMYQRPPR---------GDLAYFRAARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred eecCccHHhhhhh---------hhHHHHHHHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 9999898754311 12357789999999999 788999999 7999999999999999999998644322
Q ss_pred Cc----c---c----cccccCCCcccChhhhccC-CCC-chhhHHHHHHHHHHHHhCCCCCCCCCCc
Q 042216 632 KT----H---V----STQVKGSIGYLDPEYYRLQ-LLT-EKSDVYSFGVVLLEVLCARPPILRTGDK 685 (767)
Q Consensus 632 ~~----~---~----~~~~~gt~~y~aPE~~~~~-~~s-~ksDV~SfGvvl~elltg~~P~~~~~~~ 685 (767)
.. . . ......++.|++|+...-. ..+ ...+.++-|.-+|.++|++.+...+.++
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~~ 213 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNEG 213 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCCC
Confidence 10 0 0 1123367888888865432 333 5678999999999999999988665543
No 421
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.74 E-value=5.5e-17 Score=163.89 Aligned_cols=265 Identities=19% Similarity=0.188 Sum_probs=189.4
Q ss_pred hccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhcc-ccceeeeEeeeeecCCceEEEEec
Q 042216 475 KDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 475 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
-+|...++||+|.||..+.|+.--.+++||||.-... .+.-++..|.+..+.| ..+.|...+-+-.++.+-.||+|.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk--S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL 105 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK--SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL 105 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEecccc--CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence 3678888999999999999998767799999964322 2334567788777777 468888888888888888999998
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECC-----CCcEEEeecCCcccCC
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDE-----EWVAKVSDFGLCKFGP 628 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~-----~~~~ki~DfGla~~~~ 628 (767)
+. -||.|+..-. ...++.+++.-||.|++.-++|+| .+.+|.|||||+|.||.. ...+.|.|||+|+...
T Consensus 106 LG-PSLEDLFD~C-gR~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Yr 180 (449)
T KOG1165|consen 106 LG-PSLEDLFDLC-GRRFSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYR 180 (449)
T ss_pred hC-cCHHHHHHHh-cCcccHHhHHHHHHHHHHHHHHHH---hcceeecccCccceeecCCCCCCCceEEEEeccchhhhc
Confidence 84 4777765433 345899999999999999999999 788999999999999963 3368999999998754
Q ss_pred CCCC-ccc----cccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCc
Q 042216 629 NFSK-THV----STQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKI 703 (767)
Q Consensus 629 ~~~~-~~~----~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~ 703 (767)
.... .+. .....||.+||+-....+..-+..-|+=|+|-+.+..+.|..||.+........--+-+.+..+...+
T Consensus 181 Dp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i 260 (449)
T KOG1165|consen 181 DPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPI 260 (449)
T ss_pred CccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCH
Confidence 3221 111 12356999999999888888899999999999999999999999776432111111111111111111
Q ss_pred cccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhh
Q 042216 704 GDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFVFQLL 755 (767)
Q Consensus 704 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~~~~~ 755 (767)
.++ ....++++..-+.-.-..+-.+-|..+-+..-+..++...
T Consensus 261 ~~L---------c~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~ 303 (449)
T KOG1165|consen 261 EVL---------CEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRL 303 (449)
T ss_pred HHH---------HhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhc
Confidence 111 1123445544444444456667788877777777666554
No 422
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.73 E-value=1.1e-17 Score=172.34 Aligned_cols=197 Identities=22% Similarity=0.299 Sum_probs=139.3
Q ss_pred ccceeeeEeeeeec---------------------------CCceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHH
Q 042216 530 RYLHLVSLIGYCND---------------------------DGQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIG 582 (767)
Q Consensus 530 ~Hpniv~l~g~~~~---------------------------~~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ 582 (767)
+|||||++.+++.+ ...+|+||.-.+. +|+++|-... .+...+.-|+.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~---~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH---RSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC---CchHHHHHHHHH
Confidence 59999999987632 2357899988876 9999985432 344556668889
Q ss_pred HHHHHHHhHhCCCCCeEecCCCCCCeEE--CCCC--cEEEeecCCcccCCCC--CCccc--cccccCCCcccChhhhccC
Q 042216 583 AARALHYLHTGASKVIIHRDVKTTNILL--DEEW--VAKVSDFGLCKFGPNF--SKTHV--STQVKGSIGYLDPEYYRLQ 654 (767)
Q Consensus 583 ia~gL~yLH~~~~~~iiH~Dlk~~NILl--d~~~--~~ki~DfGla~~~~~~--~~~~~--~~~~~gt~~y~aPE~~~~~ 654 (767)
+++|+.||| .++|.|||+|++|||+ |++. ...|+|||++-..... .-... .-...|...-||||+....
T Consensus 350 lLEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~ 426 (598)
T KOG4158|consen 350 LLEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAV 426 (598)
T ss_pred HHHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcC
Confidence 999999999 7889999999999998 4444 5689999997532210 00111 1123477889999988642
Q ss_pred C------CCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHH
Q 042216 655 L------LTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAM 728 (767)
Q Consensus 655 ~------~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~ 728 (767)
+ --.|+|.|+.|.+.||+++...||...++.- .+... +++..+ ...+..++..+.+++.
T Consensus 427 PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~-L~~r~-----Yqe~qL---------Palp~~vpp~~rqlV~ 491 (598)
T KOG4158|consen 427 PGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEML-LDTRT-----YQESQL---------PALPSRVPPVARQLVF 491 (598)
T ss_pred CCCceeeccchhhhhhhhhhHHHHhccCCcccccchhe-echhh-----hhhhhC---------CCCcccCChHHHHHHH
Confidence 1 1258999999999999999999997744321 11111 222221 1235567778899999
Q ss_pred HccccCCCCCCCHHHHHHHH
Q 042216 729 SCVNDDRIRRPSMSDVVWGL 748 (767)
Q Consensus 729 ~Cl~~dp~~RPs~~evl~~L 748 (767)
..++.||.+|++..-....|
T Consensus 492 ~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 492 DLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred HHhcCCccccCCccHHHhHH
Confidence 99999999999865544444
No 423
>PRK10345 hypothetical protein; Provisional
Probab=99.73 E-value=2.6e-17 Score=164.80 Aligned_cols=136 Identities=20% Similarity=0.223 Sum_probs=106.7
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhcc-----ccceeeeEeeeeecCC---c-e
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQL-----RYLHLVSLIGYCNDDG---Q-M 547 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l-----~Hpniv~l~g~~~~~~---~-~ 547 (767)
+....+||+|+||.||. +...... +||+.........+++.+|+.++..+ .||||++++|++.++. . .
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 44566899999999996 5545444 79988765555567899999999999 5799999999998763 3 3
Q ss_pred EEEEec--CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHH-HHhHhCCCCCeEecCCCCCCeEECC----CCcEEEee
Q 042216 548 ILVYDY--MARGTLRDHLYNNDNPPLPWDRRLKICIGAARAL-HYLHTGASKVIIHRDVKTTNILLDE----EWVAKVSD 620 (767)
Q Consensus 548 ~lV~ey--~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL-~yLH~~~~~~iiH~Dlk~~NILld~----~~~~ki~D 620 (767)
.+|+|| +.+|+|.+++.+. .+++. ..++.+++.++ +||| +++|+||||||+|||++. +..++|+|
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh---~~~IvhrDlKp~NILl~~~~~~~~~~~LiD 152 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLL---DNRIVTMELKPQNILCQRISESEVIPVVCD 152 (210)
T ss_pred EEEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEeccCCCCCcEEEEE
Confidence 378999 5589999999543 25555 35677888777 9999 788999999999999973 34899999
Q ss_pred cCC
Q 042216 621 FGL 623 (767)
Q Consensus 621 fGl 623 (767)
|+-
T Consensus 153 g~G 155 (210)
T PRK10345 153 NIG 155 (210)
T ss_pred CCC
Confidence 543
No 424
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.72 E-value=7.3e-17 Score=188.63 Aligned_cols=199 Identities=21% Similarity=0.193 Sum_probs=157.8
Q ss_pred HHHHhhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccc---cceeeeEeeeeecCCc
Q 042216 470 IKEATKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLR---YLHLVSLIGYCNDDGQ 546 (767)
Q Consensus 470 i~~~t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~---Hpniv~l~g~~~~~~~ 546 (767)
++...+.|.+.+.||+|+||+||+|...+ ++.||+|.-++.+..+ |.--.+++.+|+ -+-|..+...+.-.+.
T Consensus 693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~ 768 (974)
T KOG1166|consen 693 FEVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSAHVFQNA 768 (974)
T ss_pred eeecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHHHccCCc
Confidence 33345678888899999999999999987 7899999988776553 322333444444 2234444444455677
Q ss_pred eEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEEC-------CCCcEEEe
Q 042216 547 MILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLD-------EEWVAKVS 619 (767)
Q Consensus 547 ~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld-------~~~~~ki~ 619 (767)
-+||+||.+.|+|.+++. ..+.++|...+.+..|+++.+..|| ..+|||+||||+|.||. +..-++|+
T Consensus 769 S~lv~ey~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lI 843 (974)
T KOG1166|consen 769 SVLVSEYSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADSDSKGLYLI 843 (974)
T ss_pred ceeeeeccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHH---hcceecccCCcceeEeecccCCCCcccceEEE
Confidence 889999999999999995 5567999999999999999999999 78899999999999993 34468999
Q ss_pred ecCCcccCCCCCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCC
Q 042216 620 DFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARP 677 (767)
Q Consensus 620 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~ 677 (767)
|||.+-...-..........++|-.+-.+|...+...+.+.|.|.++.+++-|+.|+.
T Consensus 844 DfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 844 DFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred ecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 9999864333333334455678889999999999999999999999999999999875
No 425
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.71 E-value=3.3e-18 Score=187.15 Aligned_cols=226 Identities=23% Similarity=0.223 Sum_probs=173.9
Q ss_pred eeeccCcEEEEEEEe---cCCCceEEEEEeCCCCCcc--hhHHHHHHHHHhccc-cceeeeEeeeeecCCceEEEEecCC
Q 042216 482 IIGRGGFGNVYKGFL---NGDSTPVAIKRLNPGSQQG--ALEFQTEIGMLSQLR-YLHLVSLIGYCNDDGQMILVYDYMA 555 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~---~~~~~~vAVK~l~~~~~~~--~~~f~~Ei~~l~~l~-Hpniv~l~g~~~~~~~~~lV~ey~~ 555 (767)
++|+|+||.|+++.- .+.++.+|+|.+++..... ......|..++...+ ||.++++.-.+..+...+++.++..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 379999999986532 3345778888886553211 113456778888886 9999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccc
Q 042216 556 RGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHV 635 (767)
Q Consensus 556 ~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~ 635 (767)
+|.|...+.+.. ..+..........++-++.++| +.+|+|||+|++||+++.+|.+++.|||+++..-....
T Consensus 81 gg~lft~l~~~~--~f~~~~~~~~~aelaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~--- 152 (612)
T KOG0603|consen 81 GGDLFTRLSKEV--MFDELDVAFYLAELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI--- 152 (612)
T ss_pred cchhhhccccCC--chHHHHHHHHHHHHHHHHhhcc---hhHHHHhcccccceeecccCccccCCchhhhHhHhhhh---
Confidence 999999885543 3566666667778899999999 88899999999999999999999999999886432221
Q ss_pred cccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCC
Q 042216 636 STQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNA 715 (767)
Q Consensus 636 ~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 715 (767)
.+||..|||||++. ......|.||||++++||++|..||.. +. +..... ..-..
T Consensus 153 ---~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~------~~~Il~-----------~~~~~ 206 (612)
T KOG0603|consen 153 ---ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DT------MKRILK-----------AELEM 206 (612)
T ss_pred ---cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HH------HHHHhh-----------hccCC
Confidence 18999999999998 567789999999999999999999965 11 111111 01123
Q ss_pred ChhhHHHHHHHHHHccccCCCCCCCH
Q 042216 716 PPVCLNQFVEVAMSCVNDDRIRRPSM 741 (767)
Q Consensus 716 ~~~~~~~l~~li~~Cl~~dp~~RPs~ 741 (767)
|........+++..++..+|..|.-.
T Consensus 207 p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 207 PRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred chhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 55556667788888888888888644
No 426
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.67 E-value=4.8e-16 Score=157.25 Aligned_cols=134 Identities=28% Similarity=0.377 Sum_probs=112.2
Q ss_pred eeeeccCcEEEEEEEecCCCceEEEEEeCCCCCc--------chhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEe
Q 042216 481 LIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQ--------GALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 481 ~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~--------~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~e 552 (767)
+.||+|++|.||+|...+ ..+++|+....... ....+.+|++++..++|+++.....++...+..+++||
T Consensus 2 ~~l~~G~~~~vy~~~~~~--~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e 79 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLG--IKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVME 79 (211)
T ss_pred cccccCceEEEEEEeeCC--CceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEE
Confidence 479999999999998843 57899987643221 12357889999999999998887777777788899999
Q ss_pred cCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCccc
Q 042216 553 YMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKF 626 (767)
Q Consensus 553 y~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~ 626 (767)
|+++++|.+++... .+ .+..++.+++.+|.+|| ..+++|+|++|.|||++ ++.++|+|||+++.
T Consensus 80 ~~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 80 YIEGEPLKDLINSN-----GM-EELELSREIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EeCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999998532 12 78899999999999999 78899999999999999 78999999999764
No 427
>smart00090 RIO RIO-like kinase.
Probab=99.67 E-value=5.2e-16 Score=159.16 Aligned_cols=141 Identities=17% Similarity=0.178 Sum_probs=109.4
Q ss_pred ccccceeeeccCcEEEEEEE-ecCCCceEEEEEeCCCCCc------------------------chhHHHHHHHHHhccc
Q 042216 476 DFNNLLIIGRGGFGNVYKGF-LNGDSTPVAIKRLNPGSQQ------------------------GALEFQTEIGMLSQLR 530 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~-~~~~~~~vAVK~l~~~~~~------------------------~~~~f~~Ei~~l~~l~ 530 (767)
.|...+.||+|+||.||+|. ...+++.||||++...... ....+..|++.+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46677789999999999998 5556789999998754210 0122568999999997
Q ss_pred cc--eeeeEeeeeecCCceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCC-eEecCCCCCC
Q 042216 531 YL--HLVSLIGYCNDDGQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKV-IIHRDVKTTN 607 (767)
Q Consensus 531 Hp--niv~l~g~~~~~~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-iiH~Dlk~~N 607 (767)
+. .+.+++++ ...++||||+++++|...+... ..+...+...++.|++.+|.+|| ..+ ++||||||+|
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH---~~g~iiH~Dikp~N 179 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLY---KEGELVHGDLSEYN 179 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHH---hcCCEEeCCCChhh
Confidence 53 33444443 2358999999998887765322 34566677899999999999999 788 9999999999
Q ss_pred eEECCCCcEEEeecCCccc
Q 042216 608 ILLDEEWVAKVSDFGLCKF 626 (767)
Q Consensus 608 ILld~~~~~ki~DfGla~~ 626 (767)
|+++ ++.++|+|||++..
T Consensus 180 Ili~-~~~i~LiDFg~a~~ 197 (237)
T smart00090 180 ILVH-DGKVVIIDVSQSVE 197 (237)
T ss_pred EEEE-CCCEEEEEChhhhc
Confidence 9999 88999999999874
No 428
>PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan [. This entry represents a malectin domain, and can also be found in probable receptor-like serine/threonine-protein kinases from plants [] and in proteins described as glycoside hydrolases. ; PDB: 2KR2_A 2JWP_A 2K46_A.
Probab=99.66 E-value=4.8e-17 Score=158.17 Aligned_cols=145 Identities=25% Similarity=0.335 Sum_probs=87.8
Q ss_pred eeEeecCCcccccCCCCccccccccCCCceecCCCCCCCCCc--ceEEEeccccCCCCcHHHHHhhhccCCCCCcccccc
Q 042216 196 LYRINVGGSFISPQMDTGMYRTWIADDGYVTDARPSALPVNT--TIVLRFSRILNFSAPLAVYRTARTMGLDKNINEQYN 273 (767)
Q Consensus 196 ~~R~n~G~~~~~~~~dd~~~R~W~~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~~v~~ta~~~~~~~~~~~~~~ 273 (767)
++|+|+||+.. +|..+..|++|..|....... ..... ..............++.+|||+|.... +
T Consensus 2 ~~~IN~Gg~~~----~~~~g~~w~~D~~~~~g~~~y-~~~~~~~~~~~~~~~~i~~t~d~~Lyqt~R~g~~--------~ 68 (174)
T PF11721_consen 2 VLRINAGGPAY----TDSSGIVWEADQYYTGGSWGY-YVSSDNNGSTSSTNSSIPGTTDDPLYQTERYGPS--------S 68 (174)
T ss_dssp EEEEEETSSSE----EETTTEEE-SSSSSTTSS------------SSTTS--TTS-HHHHHTTT-----SS--------S
T ss_pred EEEEECCCCcc----cCCCCCEEcCCCCCCCCCccc-ccccccccccccccccccCCCchhhhHhhcCCCC--------c
Confidence 57999999974 555999999998874322200 00000 000011223345678899999999222 4
Q ss_pred eEEEEe-cCCCceEEEEEeeeeeeccc----ccCccEEEEEEEcccccccccchhhhcCCCCcceEeee-EEEecccccc
Q 042216 274 LTWEFQ-VDSGFIYFVRLHFCEFQSEV----TEEGDRVFKIYLANLTAEDVADVIAWSGGNGVPEYRDY-AVAIGSKSDV 347 (767)
Q Consensus 274 lt~~~~-~~~~~~y~v~lhFae~~~~~----~~~~~R~F~i~in~~~~~~~~di~~~~~~~~~p~y~~~-~v~~~~~~~~ 347 (767)
|+|.+| +.+| .|.|+|||||+.... ...|+|+|||+|||+++.++|||.+.+|+...+.++.+ .+.+.++
T Consensus 69 f~Y~ip~~~~G-~Y~V~L~FaE~~~~~~~~~~~~G~RvFdV~v~g~~vl~~~Di~~~~G~~~~~~~~~~~~v~v~dg--- 144 (174)
T PF11721_consen 69 FSYDIPVVPNG-TYTVRLHFAELYFGASGGASGPGQRVFDVYVNGETVLKNFDIYAEAGGFNKAAVRRFFNVTVTDG--- 144 (174)
T ss_dssp EEEEEE--S-E-EEEEEEEEE-SSS--------SSSS-EEEEETTEEEEEEE-HHHHHSSSS---EEEEEEEEEETT---
T ss_pred eEEEEecCCCc-EEEEEEEeccccccccccccCCCceEEEEEecceEEEeccCHHHHcCCCceEEEEEEEEEEEeCC---
Confidence 899999 5556 899999999998732 33899999999999999999999999998887888777 5655433
Q ss_pred ccceeEEEecCCC
Q 042216 348 KKQNLSIALHPAP 360 (767)
Q Consensus 348 ~~~~l~i~l~p~~ 360 (767)
.|.|.+.+..
T Consensus 145 ---~L~i~f~~~~ 154 (174)
T PF11721_consen 145 ---TLNIQFVWAG 154 (174)
T ss_dssp ---EEETTEEEE-
T ss_pred ---cEEEEEEecC
Confidence 4777776533
No 429
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.65 E-value=4.1e-17 Score=175.45 Aligned_cols=171 Identities=27% Similarity=0.370 Sum_probs=127.0
Q ss_pred CceEEEEecCCCCChhhhhcc-CCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCC
Q 042216 545 GQMILVYDYMARGTLRDHLYN-NDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGL 623 (767)
Q Consensus 545 ~~~~lV~ey~~~gsL~~~L~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGl 623 (767)
..+++.|++|...+|.++|.+ ......+|...+.++.|++.|+.| ++.+|+|+||.||+...+..+||+|||+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhh
Confidence 358899999999999999964 344567899999999999999998 5689999999999999999999999999
Q ss_pred cccCCCCC----CccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCccchhHHHHHHHHh
Q 042216 624 CKFGPNFS----KTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC-ARPPILRTGDKKQVNLAVWATECY 698 (767)
Q Consensus 624 a~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt-g~~P~~~~~~~~~~~l~~~~~~~~ 698 (767)
........ .....+...||..||+||.+.+..|+.|+||||+|++|+||+. =..++.... ...-+
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~----------t~~d~ 472 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIA----------TLTDI 472 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHH----------hhhhh
Confidence 86543322 1223456779999999999999999999999999999999986 222221110 00111
Q ss_pred hcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCC
Q 042216 699 RNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPS 740 (767)
Q Consensus 699 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs 740 (767)
+.+. +++....++|. =..++.+++...|.+||+
T Consensus 473 r~g~----ip~~~~~d~p~-----e~~ll~~lls~~p~~RP~ 505 (516)
T KOG1033|consen 473 RDGI----IPPEFLQDYPE-----EYTLLQQLLSPSPEERPS 505 (516)
T ss_pred hcCC----CChHHhhcCcH-----HHHHHHHhcCCCcccCch
Confidence 1211 11111112222 257889999999999993
No 430
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.65 E-value=1e-15 Score=176.37 Aligned_cols=137 Identities=23% Similarity=0.310 Sum_probs=111.8
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--CC------cchhHHHHHHHHHhccccceeeeEeeeeecCC
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--SQ------QGALEFQTEIGMLSQLRYLHLVSLIGYCNDDG 545 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~~------~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~ 545 (767)
...|...+.||+|+||+||+|.+.+. .+++|+.... .. .....+.+|++++..++|++++....++....
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~ 409 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE 409 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC
Confidence 34456677899999999999988654 3444432211 11 12345889999999999999998888887777
Q ss_pred ceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcc
Q 042216 546 QMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCK 625 (767)
Q Consensus 546 ~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~ 625 (767)
..++||||+++++|.+++. ....++.+++++|.+|| +.+++||||||+|||+ +++.++|+|||+++
T Consensus 410 ~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH---~~giiHrDlkp~NILl-~~~~~~liDFGla~ 475 (535)
T PRK09605 410 EKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLH---KAGIVHGDLTTSNFIV-RDDRLYLIDFGLGK 475 (535)
T ss_pred CCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHH---hCCCccCCCChHHEEE-ECCcEEEEeCcccc
Confidence 8899999999999999884 45789999999999999 7889999999999999 67799999999987
Q ss_pred c
Q 042216 626 F 626 (767)
Q Consensus 626 ~ 626 (767)
.
T Consensus 476 ~ 476 (535)
T PRK09605 476 Y 476 (535)
T ss_pred c
Confidence 5
No 431
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.65 E-value=9.4e-16 Score=153.62 Aligned_cols=130 Identities=25% Similarity=0.369 Sum_probs=105.6
Q ss_pred eeeccCcEEEEEEEecCCCceEEEEEeCCCCCc--------chhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 482 IIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQ--------GALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~--------~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
+||+|+||.||+|.+.+ ..+++|+....... ...++.+|++++..++|+++.....++...+..++||||
T Consensus 1 ~ig~G~~~~vy~~~~~~--~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFLG--LKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEeecCC--ccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence 48999999999998643 67999986543211 124577899999999988766555555666778999999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCccc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKF 626 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~ 626 (767)
+++++|.+++..... .++.+++.+|.+|| ..+++|+|++|.||+++ ++.+++.|||+++.
T Consensus 79 ~~g~~l~~~~~~~~~---------~~~~~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 79 IEGKPLKDVIEEGND---------ELLREIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred ECCccHHHHHhhcHH---------HHHHHHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 999999998743210 78999999999999 78899999999999999 78999999999874
No 432
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.63 E-value=2.2e-16 Score=180.79 Aligned_cols=210 Identities=25% Similarity=0.325 Sum_probs=146.1
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
..+|+.+++|..|++|.||...++...+++|+|+-+.+. -+.+ +|.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~l-----ilRn---ilt~a~npfvv------------------ 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNL-----ILRN---ILTFAGNPFVV------------------ 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccccch-----hhhc---cccccCCccee------------------
Confidence 468999999999999999999999888889985322110 0000 22222333333
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCC---
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNF--- 630 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~--- 630 (767)
|+-...++.. ++++.. ++.+++||| +.+|+|||+||+|.+|..-|.+|++|||+++.+...
T Consensus 136 ---gDc~tllk~~--g~lPvd--------mvla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at 199 (1205)
T KOG0606|consen 136 ---GDCATLLKNI--GPLPVD--------MVLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT 199 (1205)
T ss_pred ---chhhhhcccC--CCCcch--------hhHHhHhhc---cCCeecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence 3433444322 223322 278899999 889999999999999999999999999998753211
Q ss_pred --CC--------ccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhc
Q 042216 631 --SK--------THVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRN 700 (767)
Q Consensus 631 --~~--------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~ 700 (767)
.. .-....++||+.|.|||++..+.|....|+|++|+++||.+-|+.||.+...++-.. ..+..
T Consensus 200 nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg--~visd---- 273 (1205)
T KOG0606|consen 200 NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFG--QVISD---- 273 (1205)
T ss_pred hhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHh--hhhhh----
Confidence 00 111235689999999999999999999999999999999999999998775543111 10010
Q ss_pred CCccccccccccCCCChhhHHHHHHHHHHccccCCCCCC
Q 042216 701 GKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRP 739 (767)
Q Consensus 701 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RP 739 (767)
...-.+.+.....+..+++.+.|+.+|..|-
T Consensus 274 --------~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 274 --------DIEWPEEDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred --------hccccccCcCCCHHHHHHHHHHHHhChHhhc
Confidence 0001111334456788999999999999995
No 433
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.61 E-value=3.4e-15 Score=149.56 Aligned_cols=135 Identities=21% Similarity=0.169 Sum_probs=105.6
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCc----------------------chhHHHHHHHHHhccccce
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQ----------------------GALEFQTEIGMLSQLRYLH 533 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~----------------------~~~~f~~Ei~~l~~l~Hpn 533 (767)
.+...+.||+|+||.||++... +++.||||++...... ....+..|+.++..+.|++
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred hhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 3666678999999999999886 5689999987543200 0112567888999998874
Q ss_pred --eeeEeeeeecCCceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEEC
Q 042216 534 --LVSLIGYCNDDGQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLD 611 (767)
Q Consensus 534 --iv~l~g~~~~~~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld 611 (767)
+...++. ...++||||+++++|.+.... .....++.+++.++.++| ..+++|+||||+||+++
T Consensus 95 i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh---~~gi~H~Dl~p~Nill~ 159 (198)
T cd05144 95 FPVPKPIDW----NRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAY---KHGIIHGDLSEFNILVD 159 (198)
T ss_pred CCCCceeec----CCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHH---HCCCCcCCCCcccEEEc
Confidence 4444432 356899999999999776421 245678899999999999 68899999999999999
Q ss_pred CCCcEEEeecCCccc
Q 042216 612 EEWVAKVSDFGLCKF 626 (767)
Q Consensus 612 ~~~~~ki~DfGla~~ 626 (767)
+++.++|+|||++..
T Consensus 160 ~~~~~~liDfg~~~~ 174 (198)
T cd05144 160 DDEKIYIIDWPQMVS 174 (198)
T ss_pred CCCcEEEEECCcccc
Confidence 999999999999864
No 434
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.58 E-value=2.6e-14 Score=135.42 Aligned_cols=135 Identities=19% Similarity=0.251 Sum_probs=115.2
Q ss_pred cceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhcccc--ceeeeEeeeeecCCceEEEEecCCC
Q 042216 479 NLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRY--LHLVSLIGYCNDDGQMILVYDYMAR 556 (767)
Q Consensus 479 ~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H--pniv~l~g~~~~~~~~~lV~ey~~~ 556 (767)
..+.||+|.++.||++...+ ..+++|....... ...+..|+..+..++| .++.+++++....+..++++||+++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g 77 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEG 77 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCC
Confidence 34679999999999999865 6799999865433 4578999999999987 5899999998888899999999998
Q ss_pred CChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCccc
Q 042216 557 GTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKF 626 (767)
Q Consensus 557 gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~ 626 (767)
+.+..+ +......++.+++++|.+||.....+++|+|++|+||++++.+.+++.|||+++.
T Consensus 78 ~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 78 ETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred eecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 777654 5567788899999999999965446899999999999999989999999999874
No 435
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.51 E-value=8.1e-14 Score=138.06 Aligned_cols=134 Identities=19% Similarity=0.238 Sum_probs=95.2
Q ss_pred eeeeccCcEEEEEEEecCCCceEEEEEeCCCCCc--chhHH----------------------HHHHHHHhccccce--e
Q 042216 481 LIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQ--GALEF----------------------QTEIGMLSQLRYLH--L 534 (767)
Q Consensus 481 ~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~--~~~~f----------------------~~Ei~~l~~l~Hpn--i 534 (767)
+.||+|+||.||+|... +++.||||++...... ....+ ..|.+.+..+.+.. +
T Consensus 3 ~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 3 GPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred cccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 47999999999999987 5689999998754211 11111 34555555554432 3
Q ss_pred eeEeeeeecCCceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCC-CCeEecCCCCCCeEECCC
Q 042216 535 VSLIGYCNDDGQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGAS-KVIIHRDVKTTNILLDEE 613 (767)
Q Consensus 535 v~l~g~~~~~~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~-~~iiH~Dlk~~NILld~~ 613 (767)
.+.+++ ...++||||++++.+......... .. .+...++.+++.++.++| . .+|+|+||||+||+++ +
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~lh---~~~~ivH~Dl~p~Nili~-~ 150 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKLY---REAGLVHGDLSEYNILVD-D 150 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHHh---hccCcCcCCCChhhEEEE-C
Confidence 334432 246899999999654322111110 11 567889999999999999 5 8899999999999999 8
Q ss_pred CcEEEeecCCccc
Q 042216 614 WVAKVSDFGLCKF 626 (767)
Q Consensus 614 ~~~ki~DfGla~~ 626 (767)
+.++|+|||.+..
T Consensus 151 ~~~~liDfg~a~~ 163 (187)
T cd05119 151 GKVYIIDVPQAVE 163 (187)
T ss_pred CcEEEEECccccc
Confidence 8999999999864
No 436
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.48 E-value=3.1e-13 Score=138.94 Aligned_cols=134 Identities=19% Similarity=0.191 Sum_probs=104.0
Q ss_pred eeee-ccCcEEEEEEEecCCCceEEEEEeCCCC-------------CcchhHHHHHHHHHhcccccee--eeEeeeeecC
Q 042216 481 LIIG-RGGFGNVYKGFLNGDSTPVAIKRLNPGS-------------QQGALEFQTEIGMLSQLRYLHL--VSLIGYCNDD 544 (767)
Q Consensus 481 ~~LG-~G~fG~Vy~g~~~~~~~~vAVK~l~~~~-------------~~~~~~f~~Ei~~l~~l~Hpni--v~l~g~~~~~ 544 (767)
.+|| .||.|+||++...+ ..++||++.... ......+.+|++++.+|+|+++ ...++++...
T Consensus 37 ~~lg~~~g~gtv~~v~~~~--~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTPG--VNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEeCC--ceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4688 89999999998863 679999875321 1223457889999999998774 6777765433
Q ss_pred C----ceEEEEecCCC-CChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEe
Q 042216 545 G----QMILVYDYMAR-GTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVS 619 (767)
Q Consensus 545 ~----~~~lV~ey~~~-gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~ 619 (767)
. ..++|+|++++ .+|.+++... .++.. .+.+++.+|.+|| ..+|+|+||||.|||++.++.++|+
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~----~~~~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~v~LI 184 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA---PLSEE----QWQAIGQLIARFH---DAGVYHADLNAHNILLDPDGKFWLI 184 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC---CCCHH----HHHHHHHHHHHHH---HCCCCCCCCCchhEEEcCCCCEEEE
Confidence 2 23599999997 6899888542 34443 3568999999999 7889999999999999998899999
Q ss_pred ecCCccc
Q 042216 620 DFGLCKF 626 (767)
Q Consensus 620 DfGla~~ 626 (767)
|||.++.
T Consensus 185 Dfg~~~~ 191 (239)
T PRK01723 185 DFDRGEL 191 (239)
T ss_pred ECCCccc
Confidence 9999874
No 437
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.42 E-value=3.3e-13 Score=136.64 Aligned_cols=201 Identities=22% Similarity=0.304 Sum_probs=140.2
Q ss_pred HHHhccccceeeeEeeeeecC-----CceEEEEecCCCCChhhhhccC--CCCCCChHHHHHHHHHHHHHHHHhHhCCCC
Q 042216 524 GMLSQLRYLHLVSLIGYCNDD-----GQMILVYDYMARGTLRDHLYNN--DNPPLPWDRRLKICIGAARALHYLHTGASK 596 (767)
Q Consensus 524 ~~l~~l~Hpniv~l~g~~~~~-----~~~~lV~ey~~~gsL~~~L~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ 596 (767)
.-|-.+-|-|||+++.|+.+. .+..++.|||..|+|.++|++. ....+......+++-||..||.|||. |.+
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~P 197 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCC
Confidence 445566799999999998543 4678999999999999999753 34567888889999999999999995 679
Q ss_pred CeEecCCCCCCeEECCCCcEEEeecCCcccCCCC--CCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHh
Q 042216 597 VIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNF--SKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLC 674 (767)
Q Consensus 597 ~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~ellt 674 (767)
+|+|+++..+-|++..++-+||+--.-...-... ..........+-++|.+||+-.....+-.+|||+||+..+||..
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai 277 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI 277 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence 9999999999999999999988521111100000 00011122346789999999888888899999999999999987
Q ss_pred CCCCC-CCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHH
Q 042216 675 ARPPI-LRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVV 745 (767)
Q Consensus 675 g~~P~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl 745 (767)
+..-- ......+.. ..+..++- .+.. ..-..++..|++..|..||+|.+++
T Consensus 278 lEiq~tnseS~~~~e------------e~ia~~i~-~len-------~lqr~~i~kcl~~eP~~rp~ar~ll 329 (458)
T KOG1266|consen 278 LEIQSTNSESKVEVE------------ENIANVII-GLEN-------GLQRGSITKCLEGEPNGRPDARLLL 329 (458)
T ss_pred heeccCCCcceeehh------------hhhhhhee-eccC-------ccccCcCcccccCCCCCCcchhhhh
Confidence 76532 111110000 00000000 0000 0113578899999999999999987
No 438
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.41 E-value=4.1e-14 Score=162.78 Aligned_cols=256 Identities=21% Similarity=0.262 Sum_probs=186.0
Q ss_pred ccccceeeeccCcEEEEEEEecCC-CceEEEEEeCCCC--CcchhHHHHHHHHHhccc-cceeeeEeeeeecCCceEEEE
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGD-STPVAIKRLNPGS--QQGALEFQTEIGMLSQLR-YLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~-~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~-Hpniv~l~g~~~~~~~~~lV~ 551 (767)
.|...+.||+|+|+.|-......+ ...+|+|.+.... .........|..+-..+. |+|++.+++...+.+..++..
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence 455555699999999988876433 3456677665443 222233445777777776 999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCC-cEEEeecCCcccCCC-
Q 042216 552 DYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEW-VAKVSDFGLCKFGPN- 629 (767)
Q Consensus 552 ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~-~~ki~DfGla~~~~~- 629 (767)
+|..+|++.+-+........+....-..+.|+..++.|+|. ..++.|+||||+|.+++..+ ..+++|||+|.....
T Consensus 101 ~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~ 178 (601)
T KOG0590|consen 101 SYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNK 178 (601)
T ss_pred CcccccccccccccCCccCCCCcchhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchhhcccccc
Confidence 99999999998832222245566677889999999999995 45699999999999999999 999999999986655
Q ss_pred CCCccccccccC-CCcccChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccc
Q 042216 630 FSKTHVSTQVKG-SIGYLDPEYYRLQ-LLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDII 707 (767)
Q Consensus 630 ~~~~~~~~~~~g-t~~y~aPE~~~~~-~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 707 (767)
..........+| ++.|+|||...+. ...+..|+||.|+++.-+++|..|+....... .....|.... +
T Consensus 179 ~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~-~~~~~~~~~~---~------ 248 (601)
T KOG0590|consen 179 NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD-GRYSSWKSNK---G------ 248 (601)
T ss_pred CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc-ccceeecccc---c------
Confidence 333344445668 9999999998874 55678999999999999999999986544322 1112221111 0
Q ss_pred cccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHH
Q 042216 708 DPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVV 745 (767)
Q Consensus 708 d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl 745 (767)
...............++...++..+|..|.+.+++.
T Consensus 249 --~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 249 --RFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred --ccccCccccCChhhhhcccccccCCchhcccccccc
Confidence 000111122334567888889989999999988874
No 439
>PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan [. This entry represents a malectin domain, and can also be found in probable receptor-like serine/threonine-protein kinases from plants [] and in proteins described as glycoside hydrolases. ; PDB: 2KR2_A 2JWP_A 2K46_A.
Probab=99.37 E-value=8.3e-13 Score=128.46 Aligned_cols=139 Identities=24% Similarity=0.398 Sum_probs=88.6
Q ss_pred eEEEeeCCCcccccCCCeeeccCCCCCCCCC------------cccccccCCCCCCCcccceeeccceeEEEec-CCCce
Q 042216 12 ITFVACGWLGNISAHGQTWAGDVSSQYSPLG------------HQQSTISKKPREPPYSASRLSHSQFTYTFNV-TPGQK 78 (767)
Q Consensus 12 ~~~i~cG~~~~~~~~~~~w~~D~~~~~~~~~------------~~~~~~~~~~~~~~~~t~R~f~~~~~Y~~~~-~~g~~ 78 (767)
.++||||+..+++..|.+|.+|..+..+..+ .....+..+.+..+|+|.|+-...+.|.||+ .+| .
T Consensus 2 ~~~IN~Gg~~~~~~~g~~w~~D~~~~~g~~~y~~~~~~~~~~~~~~~~i~~t~d~~Lyqt~R~g~~~f~Y~ip~~~~G-~ 80 (174)
T PF11721_consen 2 VLRINAGGPAYTDSSGIVWEADQYYTGGSWGYYVSSDNNGSTSSTNSSIPGTTDDPLYQTERYGPSSFSYDIPVVPNG-T 80 (174)
T ss_dssp EEEEEETSSSEEETTTEEE-SSSSSTTSS-----------SSTTS--TTS-HHHHHTTT-----SSSEEEEEE--S-E-E
T ss_pred EEEEECCCCcccCCCCCEEcCCCCCCCCCcccccccccccccccccccccCCCchhhhHhhcCCCCceEEEEecCCCc-E
Confidence 4899999998889999999999988665551 1222333344556799999833478999995 566 5
Q ss_pred E-EEEeeecCCCCC---CCCCCce-EEEEeCceEEEeccCcccCCCC---ceEEEEE-EeecCCCceEEEEEe-------
Q 042216 79 F-IRLHFYSTSYSG---FNISSAF-FSVKANSFTLVNNFSASFAPDD---TFFKEFC-INVPEDQRSLSITFT------- 142 (767)
Q Consensus 79 y-vR~~f~~~~y~~---~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~---~~~~e~~-~~~~~~~~~~~l~~~------- 142 (767)
| |||||....+.. ...+..+ |+|.+||-.++.++|....++. +..++++ +.+. .+.|.|.|.
T Consensus 81 Y~V~L~FaE~~~~~~~~~~~~G~RvFdV~v~g~~vl~~~Di~~~~G~~~~~~~~~~~~v~v~--dg~L~i~f~~~~~~~~ 158 (174)
T PF11721_consen 81 YTVRLHFAELYFGASGGASGPGQRVFDVYVNGETVLKNFDIYAEAGGFNKAAVRRFFNVTVT--DGTLNIQFVWAGKGTL 158 (174)
T ss_dssp EEEEEEEE-SSS--------SSSS-EEEEETTEEEEEEE-HHHHHSSSS---EEEEEEEEEE--TTEEETTEEEE--SEE
T ss_pred EEEEEEeccccccccccccCCCceEEEEEecceEEEeccCHHHHcCCCceEEEEEEEEEEEe--CCcEEEEEEecCCCcE
Confidence 7 999999777655 1223445 9999999999999999977764 4666763 3332 346777777
Q ss_pred -----cCCCCCCCceeeeee
Q 042216 143 -----PSPDYQDSYAFINGI 157 (767)
Q Consensus 143 -----~~~~~~~~~pfis~i 157 (767)
+. .+.|.||||
T Consensus 159 ~i~~~~~----~~~p~IsaI 174 (174)
T PF11721_consen 159 CIPFIGS----YGNPLISAI 174 (174)
T ss_dssp EEEEESS----SSSSSEEEE
T ss_pred Eeecccc----CCCcEEeeC
Confidence 44 577999887
No 440
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.32 E-value=8.7e-12 Score=139.30 Aligned_cols=143 Identities=20% Similarity=0.238 Sum_probs=100.5
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcch---------------------------------------
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGA--------------------------------------- 516 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~--------------------------------------- 516 (767)
.|+. +.||.|++|.||+|++++ ++.||||+.++......
T Consensus 119 ~fd~-~plasaSigQVh~A~l~~-G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ 196 (437)
T TIGR01982 119 EFEE-KPLAAASIAQVHRARLVD-GKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRR 196 (437)
T ss_pred hCCC-cceeeeehhheEEEEecC-CCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHH
Confidence 3443 479999999999999975 48999999876531110
Q ss_pred -hHHHHHHHHHhccc----cceeeeEeeee-ecCCceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHH-HHHH
Q 042216 517 -LEFQTEIGMLSQLR----YLHLVSLIGYC-NDDGQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAAR-ALHY 589 (767)
Q Consensus 517 -~~f~~Ei~~l~~l~----Hpniv~l~g~~-~~~~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~-gL~y 589 (767)
.+|.+|.+.+.+++ |.+-+.+-..+ ......+|||||+++++|.+.+..... .. .+..++..++. .+..
T Consensus 197 Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~-~~---~~~~ia~~~~~~~l~q 272 (437)
T TIGR01982 197 ELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA-GL---DRKALAENLARSFLNQ 272 (437)
T ss_pred HHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc-CC---CHHHHHHHHHHHHHHH
Confidence 12455665555553 32333333333 234567999999999999987643211 12 34556666666 4677
Q ss_pred hHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccC
Q 042216 590 LHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFG 627 (767)
Q Consensus 590 LH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~ 627 (767)
+| ..+++|+|+||.||++++++.++++|||++...
T Consensus 273 l~---~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 273 VL---RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRL 307 (437)
T ss_pred HH---hCCceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence 88 678999999999999999999999999998754
No 441
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.25 E-value=1.2e-11 Score=136.15 Aligned_cols=248 Identities=21% Similarity=0.191 Sum_probs=177.5
Q ss_pred ccccceeeec--cCcEEEEEEEe--cCCCceEEEEEeCCC--CCcchhHHHHHHHHHhcc-ccceeeeEeeeeecCCceE
Q 042216 476 DFNNLLIIGR--GGFGNVYKGFL--NGDSTPVAIKRLNPG--SQQGALEFQTEIGMLSQL-RYLHLVSLIGYCNDDGQMI 548 (767)
Q Consensus 476 ~f~~~~~LG~--G~fG~Vy~g~~--~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~ 548 (767)
.|.....+|. |.+|.||.+.. ......+|+|+-+.. ..+....=.+|+...+++ .|+|.++....+.+.+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 3555667999 99999999998 777788999984432 223333335677777777 4999999888899999999
Q ss_pred EEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHH----HHHHhHhCCCCCeEecCCCCCCeEECCC-CcEEEeecCC
Q 042216 549 LVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAAR----ALHYLHTGASKVIIHRDVKTTNILLDEE-WVAKVSDFGL 623 (767)
Q Consensus 549 lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~----gL~yLH~~~~~~iiH~Dlk~~NILld~~-~~~ki~DfGl 623 (767)
+-+|++. .+|.++.+.... .++....+.+..+..+ ||.++| +..++|-|+||.||++..+ ...+++|||+
T Consensus 195 iqtE~~~-~sl~~~~~~~~~-~~p~~~l~~~~~~~~~~~~~al~~~h---s~~~~~~~~kp~~i~~~~~~~s~~~~df~~ 269 (524)
T KOG0601|consen 195 IQTELCG-ESLQSYCHTPCN-FLPDNLLWNSLRDWLSRDVTALSHLH---SNNIVHDDLKPANIFTTSDWTSCKLTDFGL 269 (524)
T ss_pred eeecccc-chhHHhhhcccc-cCCchhhhhHHhhhhhcccccccccC---CCcccccccchhheecccccceeecCCcce
Confidence 9999986 588888765432 3666777777777777 999999 8889999999999999999 8899999999
Q ss_pred cccCCCCCCccc---cccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhc
Q 042216 624 CKFGPNFSKTHV---STQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRN 700 (767)
Q Consensus 624 a~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~ 700 (767)
............ .....|...|++||... +.++..+|+|++|.+.+|..++..+....-. ..|.. .+.
T Consensus 270 v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~------~~W~~--~r~ 340 (524)
T KOG0601|consen 270 VSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKN------SSWSQ--LRQ 340 (524)
T ss_pred eEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCC------CCccc--ccc
Confidence 876544322211 22235777899999876 5678899999999999999987665422100 01111 011
Q ss_pred CCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHH
Q 042216 701 GKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVV 745 (767)
Q Consensus 701 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl 745 (767)
+. +..++...-..++...+.++++.+|..|++.+.+.
T Consensus 341 ~~--------ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~ 377 (524)
T KOG0601|consen 341 GY--------IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILT 377 (524)
T ss_pred cc--------CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHh
Confidence 00 11111122234455688999999999999876654
No 442
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.21 E-value=1.5e-10 Score=128.55 Aligned_cols=170 Identities=17% Similarity=0.212 Sum_probs=128.0
Q ss_pred EEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCCChhhhhccCCCCCCC
Q 042216 493 KGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARGTLRDHLYNNDNPPLP 572 (767)
Q Consensus 493 ~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~gsL~~~L~~~~~~~l~ 572 (767)
.|..+.++.+|.|+..+..+........+-++.|+.+|||||++++...+.++..|||+|-+. .|..++.+ +.
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~-----l~ 102 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE-----LG 102 (690)
T ss_pred ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH-----hH
Confidence 566667778899998876655334446777899999999999999999999999999999874 56666643 33
Q ss_pred hHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccccccCCCcccChhhhc
Q 042216 573 WDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYR 652 (767)
Q Consensus 573 ~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 652 (767)
.......+.||+.||.+||+ ..+++|++|..+.|++++.|..||++|.++........ ......--..|..|+.+.
T Consensus 103 ~~~v~~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~ 178 (690)
T KOG1243|consen 103 KEEVCLGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEID 178 (690)
T ss_pred HHHHHHHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcC
Confidence 45666678999999999996 56799999999999999999999999988753222111 011111223466666544
Q ss_pred cCCCCchhhHHHHHHHHHHHHhC
Q 042216 653 LQLLTEKSDVYSFGVVLLEVLCA 675 (767)
Q Consensus 653 ~~~~s~ksDV~SfGvvl~elltg 675 (767)
... -..|.|-|||+++|++.|
T Consensus 179 ~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 179 PSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred ccc--cchhhhhHHHHHHHHhCc
Confidence 222 346999999999999998
No 443
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.19 E-value=1.2e-10 Score=113.18 Aligned_cols=131 Identities=15% Similarity=0.123 Sum_probs=95.9
Q ss_pred ceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeee-EeeeeecCCceEEEEecCCCCC
Q 042216 480 LLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVS-LIGYCNDDGQMILVYDYMARGT 558 (767)
Q Consensus 480 ~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~-l~g~~~~~~~~~lV~ey~~~gs 558 (767)
.+.|+.|.++.||+++.. +..+++|....... ....+..|++++..+.+.++++ ++.+. ....++||||+++.+
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~ 77 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSE 77 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCc
Confidence 346889999999999876 36799998765432 2335688999999987665554 44333 234589999999988
Q ss_pred hhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCC--CCCeEecCCCCCCeEECCCCcEEEeecCCccc
Q 042216 559 LRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGA--SKVIIHRDVKTTNILLDEEWVAKVSDFGLCKF 626 (767)
Q Consensus 559 L~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~ 626 (767)
+.+.. . ....++.+++++|..||... ...++|+|+++.||+++ ++.+++.||+.+..
T Consensus 78 l~~~~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 78 LLTED-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred ccccc-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 76530 1 11345678999999999432 22369999999999999 56899999998764
No 444
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.13 E-value=1.7e-10 Score=130.37 Aligned_cols=147 Identities=17% Similarity=0.138 Sum_probs=94.8
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcc--------------------------------------
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQG-------------------------------------- 515 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~-------------------------------------- 515 (767)
-.+|+. +.||+|++|.||+|+++++++.||||+.++.....
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345766 67999999999999998767899999998652110
Q ss_pred --hhHHHHHHHHHhccc----cceeeeEeeeeec-CCceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHH-H
Q 042216 516 --ALEFQTEIGMLSQLR----YLHLVSLIGYCND-DGQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARA-L 587 (767)
Q Consensus 516 --~~~f~~Ei~~l~~l~----Hpniv~l~g~~~~-~~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~g-L 587 (767)
+.+|.+|+..+.+++ +.+.+.+-..+.+ ....+|||||++|+.|.+.-.-.. ...+ +..++...+.. +
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~-~g~d---~~~la~~~v~~~~ 273 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRA-AGTD---MKLLAERGVEVFF 273 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHh-cCCC---HHHHHHHHHHHHH
Confidence 012445555454443 3333333333322 456789999999999987421111 1122 12222222221 2
Q ss_pred HHhHhCCCCCeEecCCCCCCeEECCCC----cEEEeecCCcccCC
Q 042216 588 HYLHTGASKVIIHRDVKTTNILLDEEW----VAKVSDFGLCKFGP 628 (767)
Q Consensus 588 ~yLH~~~~~~iiH~Dlk~~NILld~~~----~~ki~DfGla~~~~ 628 (767)
.-++ ..+++|+|+||.||+++.++ .+++.|||++....
T Consensus 274 ~Qif---~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 274 TQVF---RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred HHHH---hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 2233 56799999999999999888 99999999987543
No 445
>PLN03150 hypothetical protein; Provisional
Probab=99.08 E-value=1.1e-09 Score=128.18 Aligned_cols=148 Identities=20% Similarity=0.287 Sum_probs=101.7
Q ss_pred eEEEeeCCCcc-------cccC--CCeeeccCCCCCCCCC--cccccccCCCCCC------Ccccceeecc---ceeEEE
Q 042216 12 ITFVACGWLGN-------ISAH--GQTWAGDVSSQYSPLG--HQQSTISKKPREP------PYSASRLSHS---QFTYTF 71 (767)
Q Consensus 12 ~~~i~cG~~~~-------~~~~--~~~w~~D~~~~~~~~~--~~~~~~~~~~~~~------~~~t~R~f~~---~~~Y~~ 71 (767)
.+|||||+... +|.- +|.|.+|..|...... .....+..+...+ .|+|+|.+.. +.+|.+
T Consensus 193 ~~R~n~G~~~~~~~~d~~~D~~~~dR~W~~d~~~~~~~~~~~st~~~I~~~~~~~~~~P~~VyqTA~~~~~~~~~lty~~ 272 (623)
T PLN03150 193 AKRLSCGAGKSKFDEDYSGDHWGGDRFWNRMQTFGSGSDQAISTENVIKKASNAPNFYPESLYQSALVSTDTQPDLSYTM 272 (623)
T ss_pred EEEEEecCcccccccCCCCCcccCccccCcCcccCCCcccccccccccccccCCCccChHHHhhhhccccCCCCceEEEe
Confidence 46999997532 2222 7999999865322111 1112222111222 4999999843 689999
Q ss_pred ecCCCceE-EEEeeecCCCCCCCCCCce-EEEEeCceEEEeccCcccCCC---CceEEEEEEeecCCCceEEEEEecCCC
Q 042216 72 NVTPGQKF-IRLHFYSTSYSGFNISSAF-FSVKANSFTLVNNFSASFAPD---DTFFKEFCINVPEDQRSLSITFTPSPD 146 (767)
Q Consensus 72 ~~~~g~~y-vR~~f~~~~y~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~---~~~~~e~~~~~~~~~~~~~l~~~~~~~ 146 (767)
++.++..| ||+||+.-....... ..+ |+|.+|+...+++++....++ .++++++.+.+.+ +.+.|.|.|.+
T Consensus 273 ~v~~~~~Y~VrLhFaEi~~~~~~~-~~R~F~V~ing~~~~~~~di~~~~g~~~~~~~~~~~v~~~~--g~l~isl~p~~- 348 (623)
T PLN03150 273 DVDPNRNYSVWLHFAEIDNSITAE-GKRVFDVLINGDTAFKDVDIVKMSGERYTALVLNKTVAVSG--RTLTIVLQPKK- 348 (623)
T ss_pred ecCCCCCEEEEEEEEeccCccCCC-ceEEEEEEECCEEeecccChhhhcCCcccceEEEeEEeecC--CeEEEEEeeCC-
Confidence 99776666 999999765322222 335 999999999999988754333 3888888887754 68999999983
Q ss_pred CCCCceeeeeeEeEecCCc
Q 042216 147 YQDSYAFINGIELVSMPLN 165 (767)
Q Consensus 147 ~~~~~pfis~iE~~~~~~~ 165 (767)
...||||||||+.+...
T Consensus 349 --~s~pilNaiEI~~~~~~ 365 (623)
T PLN03150 349 --GTHAIINAIEVFEIITA 365 (623)
T ss_pred --CCcceeeeeeeeecccc
Confidence 35699999999998863
No 446
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.05 E-value=2.5e-09 Score=108.68 Aligned_cols=143 Identities=24% Similarity=0.360 Sum_probs=111.2
Q ss_pred eeeeccCcEEEEEEEecCCCceEEEEEeCCCCC-cchhHHHHHHHHHhcccc--ceeeeEeeeeecC---CceEEEEecC
Q 042216 481 LIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ-QGALEFQTEIGMLSQLRY--LHLVSLIGYCNDD---GQMILVYDYM 554 (767)
Q Consensus 481 ~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~H--pniv~l~g~~~~~---~~~~lV~ey~ 554 (767)
+.|+.|..+.||++...+ +..+++|....... ....++..|.+++..+++ .++.+++.++.+. +..++||||+
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 468999999999998864 46899998764422 234578899999999975 3456777777654 3668999999
Q ss_pred CCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCC----------------------------------------
Q 042216 555 ARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGA---------------------------------------- 594 (767)
Q Consensus 555 ~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~---------------------------------------- 594 (767)
++.+|.+.+.. ..++..++..++.+++++|..||+..
T Consensus 83 ~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 83 DGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred CCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 99988876532 24677888888999999999998521
Q ss_pred -------------CCCeEecCCCCCCeEECC--CCcEEEeecCCcccC
Q 042216 595 -------------SKVIIHRDVKTTNILLDE--EWVAKVSDFGLCKFG 627 (767)
Q Consensus 595 -------------~~~iiH~Dlk~~NILld~--~~~~ki~DfGla~~~ 627 (767)
...++|+|+++.||+++. ++.+.|.||+.+...
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g 207 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLG 207 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccC
Confidence 245799999999999998 667899999987753
No 447
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.03 E-value=2.2e-10 Score=126.36 Aligned_cols=250 Identities=24% Similarity=0.235 Sum_probs=176.3
Q ss_pred HHhhccccceeeeccCcEEEEEEEec-CCCceEEEEEeCCCCCcchhH--HHHHHHHHhcc-ccceeeeEeeeeecCCce
Q 042216 472 EATKDFNNLLIIGRGGFGNVYKGFLN-GDSTPVAIKRLNPGSQQGALE--FQTEIGMLSQL-RYLHLVSLIGYCNDDGQM 547 (767)
Q Consensus 472 ~~t~~f~~~~~LG~G~fG~Vy~g~~~-~~~~~vAVK~l~~~~~~~~~~--f~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~ 547 (767)
..+.+|..+..||.|.|+.|++.... .++..+++|.+.........+ -..|+.+...+ .|.+++....-+....+.
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~ 341 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG 341 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence 34568999999999999999988765 567889999886553332222 24566665555 578888877767677788
Q ss_pred EEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCC-CcEEEeecCCccc
Q 042216 548 ILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEE-WVAKVSDFGLCKF 626 (767)
Q Consensus 548 ~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~-~~~ki~DfGla~~ 626 (767)
++--||++++++...+ .....++...++++..|++.++.++| ++.++|+|+||+||++..+ +..+++|||+..-
T Consensus 342 ~ip~e~~~~~s~~l~~--~~~~~~d~~~~~~~~~q~~~~l~~i~---s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~ 416 (524)
T KOG0601|consen 342 YIPLEFCEGGSSSLRS--VTSQMLDEDPRLRLTAQILTALNVIH---SKLFVHLDVKPSNILISNDGFFSKLGDFGCWTR 416 (524)
T ss_pred cCchhhhcCcchhhhh--HHHHhcCcchhhhhHHHHHhcccccc---chhhhcccccccceeeccchhhhhccccccccc
Confidence 8999999999887666 33345788889999999999999999 8889999999999999875 8889999998753
Q ss_pred CCCCCCccccccccCCCccc--ChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCcc
Q 042216 627 GPNFSKTHVSTQVKGSIGYL--DPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIG 704 (767)
Q Consensus 627 ~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~ 704 (767)
.... .......-+++ +++......+..+.|++|||.-+.|.+++..-- .... .|.. +..+.
T Consensus 417 ~~~~-----~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls-~~~~-------~~~~--i~~~~-- 479 (524)
T KOG0601|consen 417 LAFS-----SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLS-ESGV-------QSLT--IRSGD-- 479 (524)
T ss_pred ccee-----cccccccccccccchhhccccccccccccccccccccccccCcccC-cccc-------ccee--eeccc--
Confidence 1110 01111222334 555666678889999999999999998876432 1110 0000 01111
Q ss_pred ccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 042216 705 DIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVWGLEFV 751 (767)
Q Consensus 705 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~~L~~~ 751 (767)
....+ .....+..+...+..+++..||.+.++....+..
T Consensus 480 -------~p~~~-~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 480 -------TPNLP-GLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred -------ccCCC-chHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 01111 2236677888999999999999998887666544
No 448
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.01 E-value=3e-09 Score=104.85 Aligned_cols=135 Identities=14% Similarity=0.109 Sum_probs=96.2
Q ss_pred eeeeccCcEEEEEEEecC------CCceEEEEEeCCCC------------C----------cchhHHH----HHHHHHhc
Q 042216 481 LIIGRGGFGNVYKGFLNG------DSTPVAIKRLNPGS------------Q----------QGALEFQ----TEIGMLSQ 528 (767)
Q Consensus 481 ~~LG~G~fG~Vy~g~~~~------~~~~vAVK~l~~~~------------~----------~~~~~f~----~Ei~~l~~ 528 (767)
..||.|--+.||.|...+ .+..+|||+.+... . ...+.+. +|.+.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 368999999999997653 24689999875321 0 0011233 78888988
Q ss_pred ccc--ceeeeEeeeeecCCceEEEEecCCCCChhh-hhccCCCCCCChHHHHHHHHHHHHHHHHh-HhCCCCCeEecCCC
Q 042216 529 LRY--LHLVSLIGYCNDDGQMILVYDYMARGTLRD-HLYNNDNPPLPWDRRLKICIGAARALHYL-HTGASKVIIHRDVK 604 (767)
Q Consensus 529 l~H--pniv~l~g~~~~~~~~~lV~ey~~~gsL~~-~L~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~iiH~Dlk 604 (767)
+.. -++..++++ ...+|||||+.+..+.. .|+. ..++..+...+..+++.+|..| | ..+|+|+||+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H---~~glVHGDLs 152 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYK---ECNLVHADLS 152 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHH---hCCeecCCCC
Confidence 853 345555543 46789999998754432 2221 1345556677889999999999 7 6789999999
Q ss_pred CCCeEECCCCcEEEeecCCccc
Q 042216 605 TTNILLDEEWVAKVSDFGLCKF 626 (767)
Q Consensus 605 ~~NILld~~~~~ki~DfGla~~ 626 (767)
+.|||+++ +.+.|+|||.+-.
T Consensus 153 ~~NIL~~~-~~v~iIDF~qav~ 173 (197)
T cd05146 153 EYNMLWHD-GKVWFIDVSQSVE 173 (197)
T ss_pred HHHEEEEC-CcEEEEECCCcee
Confidence 99999974 5899999998764
No 449
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.00 E-value=1.3e-08 Score=110.00 Aligned_cols=169 Identities=21% Similarity=0.240 Sum_probs=131.0
Q ss_pred cEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeee----cCCceEEEEecCCC-CChhhh
Q 042216 488 FGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCN----DDGQMILVYDYMAR-GTLRDH 562 (767)
Q Consensus 488 fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~----~~~~~~lV~ey~~~-gsL~~~ 562 (767)
-.+.||+...-+|..+++|+++....+.......-+++++++.|+|+|++..++. .+..++|||+|.++ ++|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 3678999998888999999995443333334455688999999999999988775 34578999999986 577775
Q ss_pred hccC-------------CCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCC
Q 042216 563 LYNN-------------DNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPN 629 (767)
Q Consensus 563 L~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~ 629 (767)
-... .+...++..+|.++.|++.||.++| +.|+.-+-|.+++||++.+.+++|+.+|+......
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH---SSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH---hcCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 5321 2345788999999999999999999 67788899999999999999999999988765543
Q ss_pred CCCccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCC
Q 042216 630 FSKTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPP 678 (767)
Q Consensus 630 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P 678 (767)
... |-+. --.+-|.=.||.+++.|.||..-
T Consensus 446 d~~----------------~~le---~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 446 DPT----------------EPLE---SQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CCC----------------cchh---HHhhhhHHHHHHHHHHHhhcccc
Confidence 220 1111 12367999999999999999654
No 450
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.90 E-value=1.2e-08 Score=96.44 Aligned_cols=143 Identities=21% Similarity=0.239 Sum_probs=103.5
Q ss_pred cceeeeccCcEEEEEEEecCCCceEEEEEeC-CCC-------CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEE
Q 042216 479 NLLIIGRGGFGNVYKGFLNGDSTPVAIKRLN-PGS-------QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILV 550 (767)
Q Consensus 479 ~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~-~~~-------~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV 550 (767)
.+.+|-+|+-++|+++...+ +...||.-. +.- +...+...+|++.|.+++--.|.-..-++.+...-.++
T Consensus 11 ~l~likQGAEArv~~~~~~G--e~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSG--EAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY 88 (229)
T ss_pred cceeeeccceeeEeeeccCC--ceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence 56689999999999999975 556666432 211 12234578899999988754444443344455566789
Q ss_pred EecCCC-CChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCC---cEEEeecCCccc
Q 042216 551 YDYMAR-GTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEW---VAKVSDFGLCKF 626 (767)
Q Consensus 551 ~ey~~~-gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~---~~ki~DfGla~~ 626 (767)
|||+++ -++.+++...............++..+-+.+.-|| ...|||+||..+||+|..++ .+.+.|||++..
T Consensus 89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH---~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLH---DNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhh---hCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 999976 47888886654433343444788999999999999 78899999999999996443 458999999764
No 451
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.87 E-value=1.7e-08 Score=96.14 Aligned_cols=130 Identities=26% Similarity=0.353 Sum_probs=99.0
Q ss_pred eeeccCcEEEEEEEecCCCceEEEEEeCCC-CCc-------chhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEec
Q 042216 482 IIGRGGFGNVYKGFLNGDSTPVAIKRLNPG-SQQ-------GALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~-~~~-------~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
.+++|+-+.+|.+.+.+ ..+++|.-.+. -.. ....-.+|..+|.+++--.|....=+..+.+...++|||
T Consensus 3 ~i~~GAEa~i~~~~~~g--~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 3 LIKQGAEAIIYLTDFLG--LPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred hhhCCcceeEEeeeccC--cceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 57899999999998764 34666643222 111 122357899999988765555555556677788899999
Q ss_pred CCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCccc
Q 042216 554 MARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKF 626 (767)
Q Consensus 554 ~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~ 626 (767)
+++-.|.+.|... +..++..+-.-+.-|| ..+|+|+||.++||++..+. +.++||||+..
T Consensus 81 I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA---------RPDLLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc---------chHHHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999999888543 3567778888889999 78899999999999998774 89999999874
No 452
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.84 E-value=1.3e-09 Score=126.14 Aligned_cols=249 Identities=18% Similarity=0.204 Sum_probs=166.2
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC---CcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEE
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS---QQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILV 550 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV 550 (767)
.++|...+-+-+|.++.+....-...+...++|...... .+..+....+-.++-..+||-++....-+......+|+
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~ 882 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLV 882 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchh
Confidence 345666666788999999887665555444555443221 11222233333333334566666555444456788999
Q ss_pred EecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCC--
Q 042216 551 YDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGP-- 628 (767)
Q Consensus 551 ~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~-- 628 (767)
++|..+++|...|+... .++..-.......+...++||| ...+.|+|++|.|.|+..++..+++|||......
T Consensus 883 ~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~---s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~ 957 (1205)
T KOG0606|consen 883 GHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLH---SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLI 957 (1205)
T ss_pred hHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccc---cchhhcccccccchhhcccCCcccCccccccccccc
Confidence 99999999999987643 3454444555666788999999 6668999999999999999999999998432110
Q ss_pred -C---C----------------C-------CccccccccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 042216 629 -N---F----------------S-------KTHVSTQVKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPILR 681 (767)
Q Consensus 629 -~---~----------------~-------~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~~~ 681 (767)
. . . .........+|+.|.+||...+.......|.|++|++++|.++|.+||..
T Consensus 958 ~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na 1037 (1205)
T KOG0606|consen 958 PPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNA 1037 (1205)
T ss_pred cCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCC
Confidence 0 0 0 00112235689999999999999999999999999999999999999965
Q ss_pred CCCccchhHHHHHHHHhhcCCcccccccccc-CCCChhhHHHHHHHHHHccccCCCCCCCHH
Q 042216 682 TGDKKQVNLAVWATECYRNGKIGDIIDPFLK-GNAPPVCLNQFVEVAMSCVNDDRIRRPSMS 742 (767)
Q Consensus 682 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~ 742 (767)
....... ..++...+. ...+.....+..+++...+..+|.+|-.|.
T Consensus 1038 ~tpq~~f---------------~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1038 ETPQQIF---------------ENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred cchhhhh---------------hccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 4432110 111111111 112344556677888888888999987655
No 453
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.74 E-value=5.4e-07 Score=95.20 Aligned_cols=267 Identities=15% Similarity=0.164 Sum_probs=163.8
Q ss_pred eeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhcc-ccceeeeEeee------eec-CCceEEEEe
Q 042216 481 LIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQL-RYLHLVSLIGY------CND-DGQMILVYD 552 (767)
Q Consensus 481 ~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l-~Hpniv~l~g~------~~~-~~~~~lV~e 552 (767)
..||+|+-+.+|-.-.-. ..+-|++.........+ .+.+|.+. .||-+..-+.+ --+ +...-++|.
T Consensus 17 r~LgqGgea~ly~l~e~~---d~VAKIYh~Pppa~~aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP 90 (637)
T COG4248 17 RPLGQGGEADLYTLGEVR---DQVAKIYHAPPPAAQAQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMP 90 (637)
T ss_pred ccccCCccceeeecchhh---chhheeecCCCchHHHH---HHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEecc
Confidence 469999999999643322 23457766443322222 23334443 45533321221 111 223556777
Q ss_pred cCCCC-Chhhhhc----cCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccC
Q 042216 553 YMARG-TLRDHLY----NNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFG 627 (767)
Q Consensus 553 y~~~g-sL~~~L~----~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~ 627 (767)
.+.+. -+..++. +..-...+|...++.+..+|.+.+.|| ..+.+-+|+.++|+|+.+++.+.|.|=..-.+.
T Consensus 91 ~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~ 167 (637)
T COG4248 91 KVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQIN 167 (637)
T ss_pred cCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHH---hcCCcccccCccceeeecCceEEEEcccceeec
Confidence 66553 2333332 122345789999999999999999999 677889999999999999999999874432221
Q ss_pred CCCCCccccccccCCCcccChhhhc-----cCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCCccch--hHHHHHHHHhh
Q 042216 628 PNFSKTHVSTQVKGSIGYLDPEYYR-----LQLLTEKSDVYSFGVVLLEVLCA-RPPILRTGDKKQV--NLAVWATECYR 699 (767)
Q Consensus 628 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDV~SfGvvl~elltg-~~P~~~~~~~~~~--~l~~~~~~~~~ 699 (767)
.........+|...|.+||.-. +-.-+...|.|.+||++++|+.| ++||.+....... -+. ..+.
T Consensus 168 ---~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E----~~Ia 240 (637)
T COG4248 168 ---ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLE----TDIA 240 (637)
T ss_pred ---cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcch----hhhh
Confidence 1122233456888999999765 33456789999999999999875 9999765321110 000 0011
Q ss_pred cCCccccccccc--c---CCCC-hhhHHHHHHHHHHccccC--CCCCCCHHHHHHHHHHhHhhhhccccccc
Q 042216 700 NGKIGDIIDPFL--K---GNAP-PVCLNQFVEVAMSCVNDD--RIRRPSMSDVVWGLEFVFQLLRESSEKSM 763 (767)
Q Consensus 700 ~~~~~~~~d~~l--~---~~~~-~~~~~~l~~li~~Cl~~d--p~~RPs~~evl~~L~~~~~~~~~~~~~~~ 763 (767)
.+.....-|.+. + ...| ...+..+.-+..+|+... +.-|||.+-.+..|..+.+.+..|....|
T Consensus 241 ~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~C~v~a~ 312 (637)
T COG4248 241 HGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKKCTVSAM 312 (637)
T ss_pred cceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhhhhhccc
Confidence 122212112111 0 0111 123445666777887643 56899999999999999988877766654
No 454
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.70 E-value=1.7e-07 Score=97.59 Aligned_cols=140 Identities=14% Similarity=0.102 Sum_probs=100.0
Q ss_pred eeeccCcEEEEEEEecCCCceEEEEEeCCCCCc-----------chhHHHHHHHHHhccccc--eeeeEeeeeec-----
Q 042216 482 IIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQ-----------GALEFQTEIGMLSQLRYL--HLVSLIGYCND----- 543 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~-----------~~~~f~~Ei~~l~~l~Hp--niv~l~g~~~~----- 543 (767)
.+-+.....|.+..+.+ +.+.||+....... ....+.+|...+.+|+.. ....++++...
T Consensus 29 ~v~~~~~rrvvr~~~~g--~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 29 VFRELEGRRTLRFELAG--KSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred EEecCCCceEEEEEECC--EEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 44444445577877743 68999977433211 111377898888888533 33344555543
Q ss_pred CCceEEEEecCCCC-ChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECC-------CCc
Q 042216 544 DGQMILVYDYMARG-TLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDE-------EWV 615 (767)
Q Consensus 544 ~~~~~lV~ey~~~g-sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~-------~~~ 615 (767)
....+||+|++++- +|.+++......+.+...+..++.+++..+.-|| ..+|+|+|++++|||++. +..
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEeccccCCCCCce
Confidence 23578999999986 8998885322234566777899999999999999 788999999999999975 578
Q ss_pred EEEeecCCccc
Q 042216 616 AKVSDFGLCKF 626 (767)
Q Consensus 616 ~ki~DfGla~~ 626 (767)
+.++||+.++.
T Consensus 184 ~~LIDl~r~~~ 194 (268)
T PRK15123 184 LSVIDLHRAQI 194 (268)
T ss_pred EEEEECCcccc
Confidence 99999998753
No 455
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.57 E-value=2.3e-08 Score=111.97 Aligned_cols=151 Identities=19% Similarity=0.294 Sum_probs=102.9
Q ss_pred HHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCC-------ccccccccCCCcccChhhhc
Q 042216 580 CIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSK-------THVSTQVKGSIGYLDPEYYR 652 (767)
Q Consensus 580 ~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~ 652 (767)
+.+++.||.|+|. +.++||++|.|++|.+++++..||+.|+.+........ .....-......|.|||++.
T Consensus 105 l~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 4456699999997 77899999999999999999999999998754322110 11111122456799999999
Q ss_pred cCCCCchhhHHHHHHHHHHHHhCCCC-CCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHcc
Q 042216 653 LQLLTEKSDVYSFGVVLLEVLCARPP-ILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCV 731 (767)
Q Consensus 653 ~~~~s~ksDV~SfGvvl~elltg~~P-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl 731 (767)
....+.++|+||+||+++.+..|..+ +....... ...... ...+.. ...+..+.+.++.+=+.+.+
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~-----~~~~~~-------~~~~~~-~~~~s~~~p~el~~~l~k~l 249 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLL-----SYSFSR-------NLLNAG-AFGYSNNLPSELRESLKKLL 249 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCCcc-----hhhhhh-------cccccc-cccccccCcHHHHHHHHHHh
Confidence 98999999999999999999854444 33221110 000000 000111 11122455677888899999
Q ss_pred ccCCCCCCCHHHHH
Q 042216 732 NDDRIRRPSMSDVV 745 (767)
Q Consensus 732 ~~dp~~RPs~~evl 745 (767)
..++..||++.++.
T Consensus 250 ~~~~~~rp~~~~l~ 263 (700)
T KOG2137|consen 250 NGDSAVRPTLDLLL 263 (700)
T ss_pred cCCcccCcchhhhh
Confidence 99999999887765
No 456
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.52 E-value=8.8e-07 Score=87.09 Aligned_cols=124 Identities=22% Similarity=0.255 Sum_probs=79.1
Q ss_pred EEEEEEecCCCceEEEEEeCCCC-------------Cc--------c-----hhHHHHHHHHHhccccc--eeeeEeeee
Q 042216 490 NVYKGFLNGDSTPVAIKRLNPGS-------------QQ--------G-----ALEFQTEIGMLSQLRYL--HLVSLIGYC 541 (767)
Q Consensus 490 ~Vy~g~~~~~~~~vAVK~l~~~~-------------~~--------~-----~~~f~~Ei~~l~~l~Hp--niv~l~g~~ 541 (767)
.||.|...++ ..+|||..+... .. . .....+|.+.|.++..- ++.+++.+.
T Consensus 1 ~Vy~~~~~~~-~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAIDPDG-EEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEECTT-EEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEECCCC-CEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 4899988644 689999875421 00 0 11256799999998654 455555443
Q ss_pred ecCCceEEEEecCC--CCChhhhhccCCCCCCChHHHHHHHHHHHHHHHH-hHhCCCCCeEecCCCCCCeEECCCCcEEE
Q 042216 542 NDDGQMILVYDYMA--RGTLRDHLYNNDNPPLPWDRRLKICIGAARALHY-LHTGASKVIIHRDVKTTNILLDEEWVAKV 618 (767)
Q Consensus 542 ~~~~~~~lV~ey~~--~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~y-LH~~~~~~iiH~Dlk~~NILld~~~~~ki 618 (767)
..+|||||++ +..+..+. ... ++......++.+++..+.. +| ..+|+|+||.+.|||++++ .+.|
T Consensus 80 ----~~~ivME~I~~~G~~~~~l~-~~~---~~~~~~~~~~~~il~~~~~~~~---~~givHGDLs~~NIlv~~~-~~~i 147 (188)
T PF01163_consen 80 ----RNVIVMEYIGEDGVPLPRLK-DVD---LSPEEPKELLEEILEEIIKMLH---KAGIVHGDLSEYNILVDDG-KVYI 147 (188)
T ss_dssp ----TTEEEEE--EETTEEGGCHH-HCG---GGGSTHHHHHHHHHHHHHHHHH---CTTEEESS-STTSEEEETT-CEEE
T ss_pred ----CCEEEEEecCCCccchhhHH-hcc---ccchhHHHHHHHHHHHHHHHHH---hcCceecCCChhhEEeecc-eEEE
Confidence 4579999998 54444432 211 2244566777888886655 56 7789999999999999988 9999
Q ss_pred eecCCccc
Q 042216 619 SDFGLCKF 626 (767)
Q Consensus 619 ~DfGla~~ 626 (767)
+|||.+..
T Consensus 148 IDf~qav~ 155 (188)
T PF01163_consen 148 IDFGQAVD 155 (188)
T ss_dssp --GTTEEE
T ss_pred EecCccee
Confidence 99998764
No 457
>PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan []. This entry represents a malectin-like domain found in a number of plant receptor kinases.
Probab=98.42 E-value=2e-06 Score=93.46 Aligned_cols=148 Identities=23% Similarity=0.420 Sum_probs=91.9
Q ss_pred CCceEEEeeCCCc----c-cccCCCeeeccCCCCCCCCCccc--cccc----CCCCCCC---cccceeec-----cceeE
Q 042216 9 PTEITFVACGWLG----N-ISAHGQTWAGDVSSQYSPLGHQQ--STIS----KKPREPP---YSASRLSH-----SQFTY 69 (767)
Q Consensus 9 p~~~~~i~cG~~~----~-~~~~~~~w~~D~~~~~~~~~~~~--~~~~----~~~~~~~---~~t~R~f~-----~~~~Y 69 (767)
-.-.+|++||++. + .|.-+|.|.+.... ....... ..+. ...-.+| |+|||.-+ -...|
T Consensus 177 L~~~~R~n~G~~~~~iryp~D~~dR~W~~~~~~--~~~~~ist~~~i~~~~~~~~~~~P~~V~~TA~~~~~~s~~~nltw 254 (347)
T PF12819_consen 177 LETVYRLNVGGSSSFIRYPDDTYDRIWQPYSSS--PGWSNISTTSNININSSNNPYDAPSAVYQTARTPSNSSDPLNLTW 254 (347)
T ss_pred eEEEEeecCCCcccccCCCCCcceeeccccccC--ccccccccceeeecccCCccCcChHHHHHhhhcccccccceEEEe
Confidence 4456899999776 3 66679999964111 1111111 1121 1122233 99999862 23456
Q ss_pred EEecCCCceE-EEEeeecCCCCCCCCCCce-EEEEeCceEEEeccCcccCCC--CceEEEEEEeecCCCceEEEEEecCC
Q 042216 70 TFNVTPGQKF-IRLHFYSTSYSGFNISSAF-FSVKANSFTLVNNFSASFAPD--DTFFKEFCINVPEDQRSLSITFTPSP 145 (767)
Q Consensus 70 ~~~~~~g~~y-vR~~f~~~~y~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~--~~~~~e~~~~~~~~~~~~~l~~~~~~ 145 (767)
.+ +.++..| ||+||+.-.....+.. .+ |+|..|+.......+...... .+++..+++.+++.. .+.|.+.|..
T Consensus 255 ~~-~~~~~~y~v~lHFaEi~~~~~~~~-~R~F~IyiN~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~isL~~t~ 331 (347)
T PF12819_consen 255 SF-VDPGFSYYVRLHFAEIQSLSPNNN-QREFDIYINGQTAYSDVSPPYLGADTVPYYSDYVVNVPDSG-FLNISLGPTP 331 (347)
T ss_pred cc-CCCCccEEEEEEEeecccccCCCC-eEEEEEEECCeEccCccCcccccCcceEeecceEEEecCCC-EEEEEEEeCC
Confidence 67 7888888 9999994443222222 46 999999999887555522222 256778888876543 5666667764
Q ss_pred CCCCCceeeeeeEeEec
Q 042216 146 DYQDSYAFINGIELVSM 162 (767)
Q Consensus 146 ~~~~~~pfis~iE~~~~ 162 (767)
+. .--|+|||+||+.+
T Consensus 332 ~S-~lppiLNalEIy~v 347 (347)
T PF12819_consen 332 DS-TLPPILNALEIYKV 347 (347)
T ss_pred CC-CcCceeEeeeeEeC
Confidence 32 33799999999864
No 458
>PRK09902 hypothetical protein; Provisional
Probab=98.41 E-value=3.8e-06 Score=83.12 Aligned_cols=137 Identities=20% Similarity=0.202 Sum_probs=104.4
Q ss_pred eeccCcEEEEEEEecCCCceEEEEEeCCC---C---CcchhHHHHHHHHHhcccc--ceeeeEeeeee-cC----CceEE
Q 042216 483 IGRGGFGNVYKGFLNGDSTPVAIKRLNPG---S---QQGALEFQTEIGMLSQLRY--LHLVSLIGYCN-DD----GQMIL 549 (767)
Q Consensus 483 LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~---~---~~~~~~f~~Ei~~l~~l~H--pniv~l~g~~~-~~----~~~~l 549 (767)
-|+||-+-|++..+.+ +.+-+|+-... + +.+...|.+|+..|.+|.. -.+.+++ ++. .. -..+|
T Consensus 26 ~~rgG~SgV~r~~~~g--~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~L 102 (216)
T PRK09902 26 YRRNGMSGVQCVERNG--KKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALL 102 (216)
T ss_pred cCCCCcceEEEEEeCC--cEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEE
Confidence 4679999999988865 36888976421 1 3456789999999999853 2344555 332 21 24689
Q ss_pred EEecCCC-CChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCc--EEEeecCCcc
Q 042216 550 VYDYMAR-GTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWV--AKVSDFGLCK 625 (767)
Q Consensus 550 V~ey~~~-gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~--~ki~DfGla~ 625 (767)
|+|-+++ -+|.+++.+....+.+..++..+..+++..+.-|| ..++.|+|+.+.|||++.++. ++++||.-++
T Consensus 103 VTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH---~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 103 VTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMH---SVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 9997764 48999886654446678888999999999999999 788999999999999986666 9999998765
No 459
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.32 E-value=3.8e-06 Score=84.54 Aligned_cols=106 Identities=24% Similarity=0.280 Sum_probs=83.3
Q ss_pred hhHHHHHHHHHhcccc--ceeeeEeeeeecCC----ceEEEEecCCCC-ChhhhhccCCCCCCChHHHHHHHHHHHHHHH
Q 042216 516 ALEFQTEIGMLSQLRY--LHLVSLIGYCNDDG----QMILVYDYMARG-TLRDHLYNNDNPPLPWDRRLKICIGAARALH 588 (767)
Q Consensus 516 ~~~f~~Ei~~l~~l~H--pniv~l~g~~~~~~----~~~lV~ey~~~g-sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~ 588 (767)
.....+|...+..|+. -.....+++..... ..+||+|++++- +|.+++..... ++......++.+++..+.
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALARLIA 132 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHHHHHH
Confidence 3457888888877753 34556666665432 458999999874 79999865332 566778899999999999
Q ss_pred HhHhCCCCCeEecCCCCCCeEECCCC---cEEEeecCCccc
Q 042216 589 YLHTGASKVIIHRDVKTTNILLDEEW---VAKVSDFGLCKF 626 (767)
Q Consensus 589 yLH~~~~~~iiH~Dlk~~NILld~~~---~~ki~DfGla~~ 626 (767)
-|| ..+|+|+|+++.|||++.+. .+.++||+-++.
T Consensus 133 ~lH---~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 133 KLH---DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHH---HCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 999 78899999999999999887 899999998774
No 460
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.20 E-value=8.4e-06 Score=82.56 Aligned_cols=130 Identities=22% Similarity=0.165 Sum_probs=90.1
Q ss_pred eeeeccCcEEEEEEEecCCCceEEEEEeCCCC----------------------CcchhHHHHHHHHHhccccc--eeee
Q 042216 481 LIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS----------------------QQGALEFQTEIGMLSQLRYL--HLVS 536 (767)
Q Consensus 481 ~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~----------------------~~~~~~f~~Ei~~l~~l~Hp--niv~ 536 (767)
..||.|--+.||.|....+ .++|||.-+... .......++|.+.|.+|.-. .+.+
T Consensus 97 ~~IGvGKEsdVY~~~~~~g-~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP~ 175 (304)
T COG0478 97 TKIGVGKESDVYVAIDPKG-RKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVPK 175 (304)
T ss_pred cccccCccceEEEEECCCC-CEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCCCC
Confidence 4799999999999998744 789999543210 00112356788888888644 4445
Q ss_pred EeeeeecCCceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcE
Q 042216 537 LIGYCNDDGQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVA 616 (767)
Q Consensus 537 l~g~~~~~~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ 616 (767)
.++ .+...+||||+++-.|...- ++-...-.|+..|.+-+.-+- ..+++|+|++.-||+++++|.+
T Consensus 176 P~~----~nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~---~~GiVHGDlSefNIlV~~dg~~ 241 (304)
T COG0478 176 PIA----WNRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAY---RRGIVHGDLSEFNILVTEDGDI 241 (304)
T ss_pred ccc----cccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHH---HcCccccCCchheEEEecCCCE
Confidence 443 34678999999986655432 223334445555555555444 4669999999999999999999
Q ss_pred EEeecCCcc
Q 042216 617 KVSDFGLCK 625 (767)
Q Consensus 617 ki~DfGla~ 625 (767)
.++||--+.
T Consensus 242 ~vIDwPQ~v 250 (304)
T COG0478 242 VVIDWPQAV 250 (304)
T ss_pred EEEeCcccc
Confidence 999997654
No 461
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.19 E-value=2.6e-05 Score=79.55 Aligned_cols=140 Identities=16% Similarity=0.232 Sum_probs=85.4
Q ss_pred eeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccce--eeeEeeeeecCCceEEEEecCCCCC
Q 042216 481 LIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLH--LVSLIGYCNDDGQMILVYDYMARGT 558 (767)
Q Consensus 481 ~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpn--iv~l~g~~~~~~~~~lV~ey~~~gs 558 (767)
..||+|..+.||+. . + ..+++|...... ......+|.+++..+..-. +.+.++++...+...+|||+++|..
T Consensus 7 ~~i~~G~t~~~y~~--~-~-~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~ 80 (226)
T TIGR02172 7 TQTGEGGNGESYTH--K-T-GKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKR 80 (226)
T ss_pred eeecCCCCcceeEe--c-C-CCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCcc
Confidence 47999999999984 2 2 357788876533 3345688999998886433 4566777777777889999999863
Q ss_pred -hhhhh---------------------ccCCCCCCChHHHHHHH-H----------HHHH-HHHHhHh-CCCCCeEecCC
Q 042216 559 -LRDHL---------------------YNNDNPPLPWDRRLKIC-I----------GAAR-ALHYLHT-GASKVIIHRDV 603 (767)
Q Consensus 559 -L~~~L---------------------~~~~~~~l~~~~~~~i~-~----------~ia~-gL~yLH~-~~~~~iiH~Dl 603 (767)
+...+ |.-.........+..-. . .+.. ...+|.. .....++|+|+
T Consensus 81 ~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~ 160 (226)
T TIGR02172 81 SFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDF 160 (226)
T ss_pred chhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCC
Confidence 22111 11100011111110000 0 0011 1122221 12345789999
Q ss_pred CCCCeEECCCCcEEEeecCCcccC
Q 042216 604 KTTNILLDEEWVAKVSDFGLCKFG 627 (767)
Q Consensus 604 k~~NILld~~~~~ki~DfGla~~~ 627 (767)
.|.||++++++ +.|.||+.+..+
T Consensus 161 ~~~Nii~~~~~-~~iIDwe~a~~G 183 (226)
T TIGR02172 161 QIGNLITSGKG-TYWIDLGDFGYG 183 (226)
T ss_pred CCCcEEEcCCC-cEEEechhcCcC
Confidence 99999999888 999999987643
No 462
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.15 E-value=1e-05 Score=91.27 Aligned_cols=143 Identities=19% Similarity=0.211 Sum_probs=93.9
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcc----------------------------------------
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQG---------------------------------------- 515 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~---------------------------------------- 515 (767)
.|+. +-|+.++-|-||+|++++ |+.||||+.+++-...
T Consensus 127 eF~~-~PiAsASIaQVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ 204 (517)
T COG0661 127 EFEP-EPIASASIAQVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLRE 204 (517)
T ss_pred HcCC-CchhhhhHhhheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHH
Confidence 4544 368999999999999986 5899999988753210
Q ss_pred hhHHHHHHHHHhccc----cceeeeEeeeee-cCCceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHH-HHH
Q 042216 516 ALEFQTEIGMLSQLR----YLHLVSLIGYCN-DDGQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARA-LHY 589 (767)
Q Consensus 516 ~~~f~~Ei~~l~~l~----Hpniv~l~g~~~-~~~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~g-L~y 589 (767)
.-++.+|..-+.+++ +..-+.+=..+. -.+...|+|||++|-.+.+...-+. ...+.+ .++..++++ +..
T Consensus 205 ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k---~ia~~~~~~f~~q 280 (517)
T COG0661 205 ELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRK---ELAELLVRAFLRQ 280 (517)
T ss_pred HhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCHH---HHHHHHHHHHHHH
Confidence 012444555555442 222233333333 3567899999999999988753222 234433 333333332 222
Q ss_pred hHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccC
Q 042216 590 LHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFG 627 (767)
Q Consensus 590 LH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~ 627 (767)
+- ..++.|.|..|.||+++.++++.+.|||+....
T Consensus 281 ~~---~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l 315 (517)
T COG0661 281 LL---RDGFFHADPHPGNILVRSDGRIVLLDFGIVGRL 315 (517)
T ss_pred HH---hcCccccCCCccceEEecCCcEEEEcCcceecC
Confidence 22 356999999999999999999999999998654
No 463
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.03 E-value=0.0001 Score=72.68 Aligned_cols=103 Identities=22% Similarity=0.298 Sum_probs=82.4
Q ss_pred HHHHHHHhcccc-ceeeeEeeeeecCCceEEEEecCCCCChhhhhcc-CCCCCCChHHHHHHHHHHHHHHHHhHhCCCCC
Q 042216 520 QTEIGMLSQLRY-LHLVSLIGYCNDDGQMILVYDYMARGTLRDHLYN-NDNPPLPWDRRLKICIGAARALHYLHTGASKV 597 (767)
Q Consensus 520 ~~Ei~~l~~l~H-pniv~l~g~~~~~~~~~lV~ey~~~gsL~~~L~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ 597 (767)
..|.-+++.+++ +++.+++|+| ..+++.||...+++...-.. ..-..-+|..|.+||.++++.+.+|++.....
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~C----G~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~ 82 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSC----GRFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF 82 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeEC----CCEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 457888888876 6999999999 44679999998766432000 01123689999999999999999999766566
Q ss_pred eEecCCCCCCeEECCCCcEEEeecCCccc
Q 042216 598 IIHRDVKTTNILLDEEWVAKVSDFGLCKF 626 (767)
Q Consensus 598 iiH~Dlk~~NILld~~~~~ki~DfGla~~ 626 (767)
+.-.|++++|+-+++++++|+.|...+..
T Consensus 83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~ 111 (188)
T PF12260_consen 83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFV 111 (188)
T ss_pred EEEeecchHHeEEeCCCcEEEEechhcch
Confidence 89999999999999999999999987654
No 464
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.92 E-value=1e-06 Score=97.76 Aligned_cols=181 Identities=17% Similarity=0.132 Sum_probs=128.8
Q ss_pred eeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccce-eeeEeeeeecCCceEEEEecCCCC-C
Q 042216 481 LIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLH-LVSLIGYCNDDGQMILVYDYMARG-T 558 (767)
Q Consensus 481 ~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpn-iv~l~g~~~~~~~~~lV~ey~~~g-s 558 (767)
+-+++|++++++|.+-..+. ....+.+.. ..+..-++++|.+++||| .+.-++-+..+...+++++++..| +
T Consensus 248 h~fvK~altknpKkRptaek-lL~h~fvs~-----~l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs 321 (829)
T KOG0576|consen 248 HNFVKGALTKNPKKRPTAEK-LLQHPFVSQ-----TLSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRS 321 (829)
T ss_pred HHHHHHHhcCCCccCCChhh-heeceeecc-----chhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCcc
Confidence 34789999999987554332 222444321 245567899999999999 677777777788899999999887 2
Q ss_pred hhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCcccccc
Q 042216 559 LRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQ 638 (767)
Q Consensus 559 L~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~ 638 (767)
-..-.. .....+..-+...++..-++++++||+ ..-+|+| ||+..+ ...|..||+......... ....
T Consensus 322 ~~~~~~-~se~~~~~~~~~~~~r~et~~l~~l~~---~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~---~~~t 389 (829)
T KOG0576|consen 322 SALEMT-VSEIALEQYQFAYPLRKETRPLAELHS---SYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM---KPRT 389 (829)
T ss_pred ccccCC-hhhHhhhhhhhhhhhhhhccccccccc---ccccCcc----cccccc-cccccccccCCcccCccc---cccc
Confidence 222111 111124445566677778889999994 3347888 777766 588999999876543322 2345
Q ss_pred ccCCCcccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCC
Q 042216 639 VKGSIGYLDPEYYRLQLLTEKSDVYSFGVVLLEVLCARPPI 679 (767)
Q Consensus 639 ~~gt~~y~aPE~~~~~~~s~ksDV~SfGvvl~elltg~~P~ 679 (767)
..+++.|+|||......+..+.|+|+.|+-..++.-|-+|-
T Consensus 390 ~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 390 AIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred CCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence 66899999999999999999999999998777777676663
No 465
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.87 E-value=0.00019 Score=74.28 Aligned_cols=139 Identities=22% Similarity=0.236 Sum_probs=84.8
Q ss_pred eeccCc-EEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccc-cceeeeEeeeeecCCceEEEEecCCCCChh
Q 042216 483 IGRGGF-GNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLR-YLHLVSLIGYCNDDGQMILVYDYMARGTLR 560 (767)
Q Consensus 483 LG~G~f-G~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~-Hpniv~l~g~~~~~~~~~lV~ey~~~gsL~ 560 (767)
|-.|.. ..||+....+ ..+.||+..... ..++.+|++++..+. +--+.+++++....+..++|||+++|.+|.
T Consensus 6 ~~~g~~~~~v~~~~~~~--~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 80 (244)
T cd05150 6 VTEGQSGATVYRLDGKN--PGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAA 80 (244)
T ss_pred cCCCCCcCeEEEEcCCC--CcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHh
Confidence 445555 7799987653 568888875432 345678999888884 344556777776666789999999988776
Q ss_pred hhh-------------------ccCC--CCCCC--hHHHHHHHHH--------------------HHHHHHHhHh----C
Q 042216 561 DHL-------------------YNND--NPPLP--WDRRLKICIG--------------------AARALHYLHT----G 593 (767)
Q Consensus 561 ~~L-------------------~~~~--~~~l~--~~~~~~i~~~--------------------ia~gL~yLH~----~ 593 (767)
+.. +... ..+.. ...++..+.. +...+..|-. .
T Consensus 81 ~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 160 (244)
T cd05150 81 ALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAE 160 (244)
T ss_pred HhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCc
Confidence 432 1110 00111 0011100000 1111122211 1
Q ss_pred CCCCeEecCCCCCCeEECCCCcEEEeecCCccc
Q 042216 594 ASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKF 626 (767)
Q Consensus 594 ~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~ 626 (767)
....++|+|+.+.|||++++....|.||+.+..
T Consensus 161 ~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~ 193 (244)
T cd05150 161 EDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV 193 (244)
T ss_pred CceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence 135589999999999999987789999998764
No 466
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=97.85 E-value=0.0001 Score=75.07 Aligned_cols=143 Identities=20% Similarity=0.226 Sum_probs=84.9
Q ss_pred ceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccc--eeeeEeeeeec---CCceEEEEecC
Q 042216 480 LLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYL--HLVSLIGYCND---DGQMILVYDYM 554 (767)
Q Consensus 480 ~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hp--niv~l~g~~~~---~~~~~lV~ey~ 554 (767)
++.|+.|..+.||+....+ ..+++|..... .....+..|..++..+... .+.+++.++.. ....+++|+++
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i 77 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYI 77 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEe
Confidence 3578999999999999876 47999987643 4456778898888888533 34566654432 33568999999
Q ss_pred CCCChhh----------------hh---ccC--CCCCCChHH---------HHHH------------HHHHHH-HHHHhH
Q 042216 555 ARGTLRD----------------HL---YNN--DNPPLPWDR---------RLKI------------CIGAAR-ALHYLH 591 (767)
Q Consensus 555 ~~gsL~~----------------~L---~~~--~~~~l~~~~---------~~~i------------~~~ia~-gL~yLH 591 (767)
++..+.. .+ +.. ...+..+.. .... ...+.+ .+..++
T Consensus 78 ~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (239)
T PF01636_consen 78 PGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELE 157 (239)
T ss_dssp SSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHH
Confidence 9988877 11 111 111111111 0000 011222 233333
Q ss_pred h----CCCCCeEecCCCCCCeEEC-CCCcEEEeecCCccc
Q 042216 592 T----GASKVIIHRDVKTTNILLD-EEWVAKVSDFGLCKF 626 (767)
Q Consensus 592 ~----~~~~~iiH~Dlk~~NILld-~~~~~ki~DfGla~~ 626 (767)
. .....++|+|+.+.|||++ +++.+.|.||+.+..
T Consensus 158 ~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 158 ALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred hhhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 2 2356799999999999999 666668999988653
No 467
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=97.85 E-value=0.00017 Score=71.79 Aligned_cols=136 Identities=13% Similarity=0.130 Sum_probs=89.9
Q ss_pred hhccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHH---------HHHHHHHhcccc---ceeeeEeeee
Q 042216 474 TKDFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEF---------QTEIGMLSQLRY---LHLVSLIGYC 541 (767)
Q Consensus 474 t~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f---------~~Ei~~l~~l~H---pniv~l~g~~ 541 (767)
.++|...+++-......|.+-...+ ..+++|..+.......+.| .+++..+.+++. -..+.++.++
T Consensus 30 ~~~~~~~kv~k~~~r~~ValIei~~--~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 30 DNNYKIIKVFKNTKRNYVALIEIDG--KKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred hCCceEEEeecCCCccEEEEEEECC--cEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 4677777778777777777776654 6799998765543322222 234444444432 2222322222
Q ss_pred e-----cCCceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeEECCCCcE
Q 042216 542 N-----DDGQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNILLDEEWVA 616 (767)
Q Consensus 542 ~-----~~~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NILld~~~~~ 616 (767)
. -....+|+|||++|..|.++.. ++. .++..++++|.-|| ..|+.|+|..|.|++++++ .+
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH---~~G~~HGD~hpgNFlv~~~-~i 173 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLH---KHGFYHGDPHPGNFLVSNN-GI 173 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHH---HcCCccCCCCcCcEEEECC-cE
Confidence 2 2245679999999988877641 222 24456778899999 7889999999999999966 48
Q ss_pred EEeecCCcc
Q 042216 617 KVSDFGLCK 625 (767)
Q Consensus 617 ki~DfGla~ 625 (767)
++.||+..+
T Consensus 174 ~iID~~~k~ 182 (229)
T PF06176_consen 174 RIIDTQGKR 182 (229)
T ss_pred EEEECcccc
Confidence 999998765
No 468
>PLN02876 acyl-CoA dehydrogenase
Probab=97.81 E-value=0.00029 Score=85.71 Aligned_cols=149 Identities=17% Similarity=0.283 Sum_probs=93.2
Q ss_pred ceeeeccCcEEEEEEEecCCC--ceEEEEEeCCCC-CcchhHHHHHHHHHhccc-ccee--eeEeeeeecC---CceEEE
Q 042216 480 LLIIGRGGFGNVYKGFLNGDS--TPVAIKRLNPGS-QQGALEFQTEIGMLSQLR-YLHL--VSLIGYCNDD---GQMILV 550 (767)
Q Consensus 480 ~~~LG~G~fG~Vy~g~~~~~~--~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~-Hpni--v~l~g~~~~~---~~~~lV 550 (767)
...++.|.+..+|+....+++ ..+++|+..... ......+.+|.++|+.+. |.++ .+++.+|.+. +..++|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 456899999999998876542 367777764432 223456889999999995 6654 7788888764 467899
Q ss_pred EecCCCCChhhh-----------------------hccCCC---------CCCCh--HHHHHHH---------------H
Q 042216 551 YDYMARGTLRDH-----------------------LYNNDN---------PPLPW--DRRLKIC---------------I 581 (767)
Q Consensus 551 ~ey~~~gsL~~~-----------------------L~~~~~---------~~l~~--~~~~~i~---------------~ 581 (767)
|||+++..+.+. ||.-.. .+..+ .++..+. -
T Consensus 123 ME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~ 202 (822)
T PLN02876 123 MEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPRNP 202 (822)
T ss_pred EEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCCCh
Confidence 999998654321 111110 01111 1111111 1
Q ss_pred HHHHHHHHhHhCC--------CCCeEecCCCCCCeEECC-CC-cEEEeecCCcccCC
Q 042216 582 GAARALHYLHTGA--------SKVIIHRDVKTTNILLDE-EW-VAKVSDFGLCKFGP 628 (767)
Q Consensus 582 ~ia~gL~yLH~~~--------~~~iiH~Dlk~~NILld~-~~-~~ki~DfGla~~~~ 628 (767)
.+.+.+.+|.... ...+||+|+++.|||++. +. .+-|.||.++..+.
T Consensus 203 ~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~Gd 259 (822)
T PLN02876 203 KMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLGN 259 (822)
T ss_pred hHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccCC
Confidence 1233456664321 135999999999999985 33 35789999987653
No 469
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.62 E-value=0.00035 Score=78.86 Aligned_cols=144 Identities=18% Similarity=0.180 Sum_probs=91.0
Q ss_pred ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCc-------------------------------------chhH
Q 042216 476 DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQ-------------------------------------GALE 518 (767)
Q Consensus 476 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~-------------------------------------~~~~ 518 (767)
.|+.. .||.-+.|.||+|++++ ++.||||+-++.-+. .+-+
T Consensus 163 ~f~~~-piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELD 240 (538)
T KOG1235|consen 163 EFDEE-PIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELD 240 (538)
T ss_pred hcCcc-hhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcc
Confidence 44433 59999999999999997 589999998765321 1113
Q ss_pred HHHHHHHHhcc----ccce---eeeEeeeee-cCCceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHh
Q 042216 519 FQTEIGMLSQL----RYLH---LVSLIGYCN-DDGQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYL 590 (767)
Q Consensus 519 f~~Ei~~l~~l----~Hpn---iv~l~g~~~-~~~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yL 590 (767)
|..|.+-..+. +|-+ -|.+=.++. -.....|+||||+|..+.+.-.-.. ..++-. .|+..+.++..
T Consensus 241 F~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~-~gi~~~---~i~~~l~~~~~-- 314 (538)
T KOG1235|consen 241 FTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDK-RGISPH---DILNKLVEAYL-- 314 (538)
T ss_pred hHHHHHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHH-cCCCHH---HHHHHHHHHHH--
Confidence 55555443333 3544 122222222 2357899999999998877532111 124444 33333333322
Q ss_pred HhCCCCCeEecCCCCCCeEECC----CCcEEEeecCCcccC
Q 042216 591 HTGASKVIIHRDVKTTNILLDE----EWVAKVSDFGLCKFG 627 (767)
Q Consensus 591 H~~~~~~iiH~Dlk~~NILld~----~~~~ki~DfGla~~~ 627 (767)
+.--..|.+|+|=.|.||+++. ++.+.+-|||+....
T Consensus 315 ~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~i 355 (538)
T KOG1235|consen 315 EQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVI 355 (538)
T ss_pred HHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccc
Confidence 2112456999999999999983 678999999998754
No 470
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=97.59 E-value=0.00095 Score=67.31 Aligned_cols=153 Identities=16% Similarity=0.167 Sum_probs=94.9
Q ss_pred cccCHHHHHHHhhcccccee---eeccCcEEEEEEEecCCCceEEEEEeCCCCCcc-------------------hhH--
Q 042216 463 TQFSISEIKEATKDFNNLLI---IGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQG-------------------ALE-- 518 (767)
Q Consensus 463 ~~~~~~ei~~~t~~f~~~~~---LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~-------------------~~~-- 518 (767)
...+.+.|............ |..|--+.||+|.-. ++..+|||+++...... .++
T Consensus 33 D~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~-~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv 111 (268)
T COG1718 33 DKRTLETLRRLLSRGVITELVGCISTGKEANVYLAETG-DGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLV 111 (268)
T ss_pred hhHHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccC-CCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHH
Confidence 34556666666665555555 446777789998774 34789999986542111 001
Q ss_pred ---HHHHHHHHhccc--cceeeeEeeeeecCCceEEEEecCCCC-ChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHh
Q 042216 519 ---FQTEIGMLSQLR--YLHLVSLIGYCNDDGQMILVYDYMARG-TLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHT 592 (767)
Q Consensus 519 ---f~~Ei~~l~~l~--Hpniv~l~g~~~~~~~~~lV~ey~~~g-sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~ 592 (767)
-..|..-|.++. +-.+.+.+++. .-.|||||+... .-.-.|.. -++...+...+..++++.+.-|-.
T Consensus 112 ~~W~~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~LkD---v~~e~~e~~~~~~~~v~~~~~l~~ 184 (268)
T COG1718 112 FAWARKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLKD---VPLELEEAEGLYEDVVEYMRRLYK 184 (268)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCccc---CCcCchhHHHHHHHHHHHHHHHHH
Confidence 123555555542 22333333332 446999999653 11112211 122333566677778888887773
Q ss_pred CCCCCeEecCCCCCCeEECCCCcEEEeecCCccc
Q 042216 593 GASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKF 626 (767)
Q Consensus 593 ~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~ 626 (767)
..++||+||+.-|||+. ++.+.|+|+|-+-.
T Consensus 185 --~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~ 215 (268)
T COG1718 185 --EAGLVHGDLSEYNILVH-DGEPYIIDVSQAVT 215 (268)
T ss_pred --hcCcccccchhhheEEE-CCeEEEEECccccc
Confidence 36799999999999999 77999999998764
No 471
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.57 E-value=0.0013 Score=65.27 Aligned_cols=133 Identities=22% Similarity=0.305 Sum_probs=91.6
Q ss_pred ccceeeeccCcEEEEEEEecCCCceEEEEEeCCCC----------------CcchhHHHHHHHHHhccc------cceee
Q 042216 478 NNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS----------------QQGALEFQTEIGMLSQLR------YLHLV 535 (767)
Q Consensus 478 ~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~----------------~~~~~~f~~Ei~~l~~l~------Hpniv 535 (767)
+....||+|+.=.||.- .. +...+||+..+.. ....++..+|+.....+. +.+|.
T Consensus 4 ~~~~~i~~G~~R~cy~H--P~-dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~ 80 (199)
T PF10707_consen 4 SESDLIAQGGERDCYQH--PD-DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIP 80 (199)
T ss_pred CCCcccccCCCceEEEC--CC-CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccc
Confidence 44557999999999963 32 3567899887655 223456777776666655 78999
Q ss_pred eEeeeeecCCceEEEEecCCC--C----ChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCCCCCeE
Q 042216 536 SLIGYCNDDGQMILVYDYMAR--G----TLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVKTTNIL 609 (767)
Q Consensus 536 ~l~g~~~~~~~~~lV~ey~~~--g----sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk~~NIL 609 (767)
+++|+.+.+-..-+|+|.+.+ | +|.+++.+. .++. ...+.+.+.. .||- ...|+.+|++|.||+
T Consensus 81 r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~---~~~~-~~~~~L~~f~---~~l~---~~~Iv~~dl~~~NIv 150 (199)
T PF10707_consen 81 RFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEG---GLTE-ELRQALDEFK---RYLL---DHHIVIRDLNPHNIV 150 (199)
T ss_pred cEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcC---CccH-HHHHHHHHHH---HHHH---HcCCeecCCCcccEE
Confidence 999999999889999998743 2 577777433 2454 4444444444 4454 455999999999999
Q ss_pred ECC---CC-cEEEee-cCC
Q 042216 610 LDE---EW-VAKVSD-FGL 623 (767)
Q Consensus 610 ld~---~~-~~ki~D-fGl 623 (767)
+.. +. .+.|.| ||-
T Consensus 151 ~~~~~~~~~~lvlIDG~G~ 169 (199)
T PF10707_consen 151 VQRRDSGEFRLVLIDGLGE 169 (199)
T ss_pred EEecCCCceEEEEEeCCCC
Confidence 953 22 567776 454
No 472
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.51 E-value=0.0009 Score=68.77 Aligned_cols=139 Identities=22% Similarity=0.238 Sum_probs=76.8
Q ss_pred eeeeccCcEE-EEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccc---eeeeEeeeeecC---CceEEEEec
Q 042216 481 LIIGRGGFGN-VYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYL---HLVSLIGYCNDD---GQMILVYDY 553 (767)
Q Consensus 481 ~~LG~G~fG~-Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hp---niv~l~g~~~~~---~~~~lV~ey 553 (767)
+.|+.|+... ||+. + ..+++|.... ......+.+|.++|..|... .+.+.++.+... ...+++|++
T Consensus 3 ~~~~~gG~~n~vy~~---~--~~~VlR~~~~--~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~ 75 (235)
T cd05155 3 EPVDSGGTDNATFRL---G--DDMSVRLPSA--AGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRW 75 (235)
T ss_pred eeccCCCcccceEEc---C--CceEEEcCCc--cchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEe
Confidence 4577777764 8875 1 2467776543 22345788999998877532 233344443332 234889999
Q ss_pred CCCCChhhhh------------------ccCCCC--CC-------------ChHHHH--HHH-------HHHHHH-HHH-
Q 042216 554 MARGTLRDHL------------------YNNDNP--PL-------------PWDRRL--KIC-------IGAARA-LHY- 589 (767)
Q Consensus 554 ~~~gsL~~~L------------------~~~~~~--~l-------------~~~~~~--~i~-------~~ia~g-L~y- 589 (767)
++|.++.+.. |.-... +. .|.... .+. .+.... ++.
T Consensus 76 i~G~~l~~~~~~~~~~l~~~la~~l~~LH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 155 (235)
T cd05155 76 LEGETATAAALSDPSEFAEDLADFLAALRQIDPSGGPPAGRHNFLRGGDLAVRDAETREAIEALEGVIDVDAARALWEAA 155 (235)
T ss_pred ecCCCCCccccCCHHHHHHHHHHHHHHHhCCCcccCCccCCccccCCCChhHhhHHHHHHHHHcccccChHHHHHHHHHH
Confidence 9987774321 111000 00 111110 000 011111 111
Q ss_pred hHh--CCCCCeEecCCCCCCeEECCCCcEEEeecCCccc
Q 042216 590 LHT--GASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKF 626 (767)
Q Consensus 590 LH~--~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~ 626 (767)
++. .....++|+|+.+.|||++++...-|.||+.+..
T Consensus 156 ~~~~~~~~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~ 194 (235)
T cd05155 156 LRAPWWGPPVWFHGDLAPGNLLVQDGRLSAVIDFGCLGV 194 (235)
T ss_pred hcccccCCceEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence 111 1244589999999999999876667999998764
No 473
>PRK10593 hypothetical protein; Provisional
Probab=97.45 E-value=0.003 Score=67.34 Aligned_cols=79 Identities=11% Similarity=0.079 Sum_probs=56.8
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhcccc---ceeeeEeeeeec---CCceEEE
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRY---LHLVSLIGYCND---DGQMILV 550 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H---pniv~l~g~~~~---~~~~~lV 550 (767)
......||.|..+.||+....++ .+.+|..+.. .....|..|.+.|+.|.- ..+.+++++|.. .+..+||
T Consensus 16 ~~~~~~i~~G~~~~vy~~~~~~~--~~~~k~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LV 91 (297)
T PRK10593 16 LSRVECISEQPYAALWALYDSQG--NPMPLMARSF--STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLL 91 (297)
T ss_pred hheeeecCCccceeEEEEEcCCC--CEEEEEeccc--ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEE
Confidence 34445799999999999876543 4677775321 123478899999988843 367788888754 3668999
Q ss_pred EecCCCCCh
Q 042216 551 YDYMARGTL 559 (767)
Q Consensus 551 ~ey~~~gsL 559 (767)
||+++++++
T Consensus 92 mE~i~G~~~ 100 (297)
T PRK10593 92 LERLRGVSV 100 (297)
T ss_pred EeccCCEec
Confidence 999998765
No 474
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.41 E-value=0.00038 Score=82.95 Aligned_cols=197 Identities=16% Similarity=0.164 Sum_probs=134.2
Q ss_pred HHHHHHHHHhccccceeeeEeeeeecCCc----eEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhC
Q 042216 518 EFQTEIGMLSQLRYLHLVSLIGYCNDDGQ----MILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTG 593 (767)
Q Consensus 518 ~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~----~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~ 593 (767)
....|++.+.+++|+|++..+.|..+... +.+..|++..-++...+... ..++......++.++.+||.|+|.
T Consensus 228 ~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v--~~i~~~~~r~~~~~~~~GL~~~h~- 304 (1351)
T KOG1035|consen 228 TTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSV--GSIPLETLRILHQKLLEGLAYLHS- 304 (1351)
T ss_pred HHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhc--cccCHHHHHHHHHHHhhhHHHHHH-
Confidence 34567788889999999999999765532 33456788888888877443 457788888899999999999994
Q ss_pred CCCCeEecCCCCC---CeEECCCCcEEEe--ecCCcccCCCCCCccccccccCCCcccChhhhccCCCCc--hhhHHHHH
Q 042216 594 ASKVIIHRDVKTT---NILLDEEWVAKVS--DFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYYRLQLLTE--KSDVYSFG 666 (767)
Q Consensus 594 ~~~~iiH~Dlk~~---NILld~~~~~ki~--DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~--ksDV~SfG 666 (767)
....|.-+..+ +.-.+..+...++ ||+.++..+..... .....+..+.++|......++. ..|+|.+|
T Consensus 305 --~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~---~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lg 379 (1351)
T KOG1035|consen 305 --LSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKS---FSDLLAEIRNADEDLKENTAKKSRLTDLWCLG 379 (1351)
T ss_pred --hccceeEEecccccccccCccceeecchhhhcccccCCCcccc---hhhcCccccccccccccccchhhhhhHHHHHH
Confidence 44555555444 4445666677777 88887754432221 1222445678888877665554 47999999
Q ss_pred HHHHHHHhCCCCCCCCCCccchhHHHHHHHHhhcCCccccccccccCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 042216 667 VVLLEVLCARPPILRTGDKKQVNLAVWATECYRNGKIGDIIDPFLKGNAPPVCLNQFVEVAMSCVNDDRIRRPSMSDVVW 746 (767)
Q Consensus 667 vvl~elltg~~P~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dp~~RPs~~evl~ 746 (767)
..+..+..|..+-..... +..++ +..+...+.+....|+..++++|++..+++.
T Consensus 380 ll~~~~~~~~~i~~~~~~------------------~~~~l--------~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~ 433 (1351)
T KOG1035|consen 380 LLLLQLSQGEDISEKSAV------------------PVSLL--------DVLSTSELLDALPKCLDEDSEERLSALELLT 433 (1351)
T ss_pred HHHhhhhhcCcccccccc------------------hhhhh--------ccccchhhhhhhhhhcchhhhhccchhhhhh
Confidence 999999887654311100 00000 1112225677889999999999999999986
Q ss_pred HH
Q 042216 747 GL 748 (767)
Q Consensus 747 ~L 748 (767)
..
T Consensus 434 ~~ 435 (1351)
T KOG1035|consen 434 HP 435 (1351)
T ss_pred ch
Confidence 54
No 475
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.37 E-value=0.0026 Score=65.25 Aligned_cols=141 Identities=18% Similarity=0.218 Sum_probs=80.7
Q ss_pred eeeeccCcEEEEEEEecC-CCceEEEEEeCCCCCcchhHHHHHHHHHhccccceee-eEeeeeecCCceEEEEecCCCCC
Q 042216 481 LIIGRGGFGNVYKGFLNG-DSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLV-SLIGYCNDDGQMILVYDYMARGT 558 (767)
Q Consensus 481 ~~LG~G~fG~Vy~g~~~~-~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv-~l~g~~~~~~~~~lV~ey~~~gs 558 (767)
+.|..|-...+|+....+ .+..+++|+....... .....+|+.++..+....++ ++++.+. + .++|||+++.+
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~~-~---~~l~e~i~G~~ 78 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL-IIDRERELRIHKLLSKHGLAPKLYATFQ-N---GLIYEFIPGRT 78 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc-eecHHHHHHHHHHHHhCCCCCeEEEEeC-C---cEEEEeeCCCc
Confidence 457778888999987653 2357888877543222 22345788888888543333 3333332 2 37999999876
Q ss_pred hhhh-----------------hccCCC---------CCC-ChHHHHHHHH----------------------HHH---HH
Q 042216 559 LRDH-----------------LYNNDN---------PPL-PWDRRLKICI----------------------GAA---RA 586 (767)
Q Consensus 559 L~~~-----------------L~~~~~---------~~l-~~~~~~~i~~----------------------~ia---~g 586 (767)
+... +|.... ... -|..+..+.. .+. ..
T Consensus 79 l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 158 (235)
T cd05157 79 LEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEISW 158 (235)
T ss_pred CCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHHHHH
Confidence 6321 111110 011 1222111111 111 11
Q ss_pred HH-HhHh-CCCCCeEecCCCCCCeEECC-CCcEEEeecCCccc
Q 042216 587 LH-YLHT-GASKVIIHRDVKTTNILLDE-EWVAKVSDFGLCKF 626 (767)
Q Consensus 587 L~-yLH~-~~~~~iiH~Dlk~~NILld~-~~~~ki~DfGla~~ 626 (767)
|. .+.. .....++|+|+.+.|||+++ +..+.+.||..+..
T Consensus 159 l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~ 201 (235)
T cd05157 159 LKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGY 201 (235)
T ss_pred HHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence 11 1111 12356999999999999998 57899999988764
No 476
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.36 E-value=0.0012 Score=63.14 Aligned_cols=130 Identities=17% Similarity=0.156 Sum_probs=86.4
Q ss_pred ccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCCCC
Q 042216 478 NNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMARG 557 (767)
Q Consensus 478 ~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~~g 557 (767)
.....|++|++|.||+|.+.+ ..+|+|.-+.++. ...+..|+++|..+.--++.+=+-.+. .-.+.|||+.|-
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~~~--~~~a~Kvrr~ds~--r~~l~kEakiLeil~g~~~~p~vy~yg---~~~i~me~i~G~ 97 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEWRG--GEVALKVRRRDSP--RRNLEKEAKILEILAGEGVTPEVYFYG---EDFIRMEYIDGR 97 (201)
T ss_pred hhhhhhhcccccEEEEeeccC--ceEEEEEecCCcc--hhhHHHHHHHHHHhhhcCCCceEEEec---hhhhhhhhhcCc
Confidence 344579999999999999976 4799998765543 446888999999887666654433222 223459999998
Q ss_pred ChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCeEecCCC-CCCeEECCCCcEEEeecCCccc
Q 042216 558 TLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVIIHRDVK-TTNILLDEEWVAKVSDFGLCKF 626 (767)
Q Consensus 558 sL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH~Dlk-~~NILld~~~~~ki~DfGla~~ 626 (767)
.|.+.-... +-++... +++.-.-|- ..+|-|+.|. |...+|..+..+.|+||.-|++
T Consensus 98 ~L~~~~~~~-----~rk~l~~----vlE~a~~LD---~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 98 PLGKLEIGG-----DRKHLLR----VLEKAYKLD---RLGIEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred chhhhhhcc-----cHHHHHH----HHHHHHHHH---HhccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 887764321 2233333 344423333 5668888883 5555555555999999998774
No 477
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.34 E-value=0.0015 Score=68.11 Aligned_cols=137 Identities=15% Similarity=0.165 Sum_probs=78.2
Q ss_pred eeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccceee-eEeeeeecCCceEEEEecCCCCChhh
Q 042216 483 IGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLV-SLIGYCNDDGQMILVYDYMARGTLRD 561 (767)
Q Consensus 483 LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv-~l~g~~~~~~~~~lV~ey~~~gsL~~ 561 (767)
+..|-...+|+.... +..+++|........-.....+|.++++.+....++ ++++.+. -++|+||+++..+..
T Consensus 4 ~~~G~tn~~y~~~~~--~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~~~ 77 (256)
T TIGR02721 4 LSGGLTNRSWRIEHP--GISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVITL 77 (256)
T ss_pred CCCcCcCCeEEEEeC--CccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCccccc
Confidence 456777889988743 357888876543322212457888888888643333 3343332 368999999876643
Q ss_pred h-----------------hccCC--CCCCChHHHH-HHHHH---------HHHHHHHhHhC-----CCCCeEecCCCCCC
Q 042216 562 H-----------------LYNND--NPPLPWDRRL-KICIG---------AARALHYLHTG-----ASKVIIHRDVKTTN 607 (767)
Q Consensus 562 ~-----------------L~~~~--~~~l~~~~~~-~i~~~---------ia~gL~yLH~~-----~~~~iiH~Dlk~~N 607 (767)
. ||... ..+++...+. ....+ +...+..+... ....++|+|+.+.|
T Consensus 78 ~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~N 157 (256)
T TIGR02721 78 DQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYN 157 (256)
T ss_pred ccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCc
Confidence 1 11111 1112222111 11101 11112222111 13468999999999
Q ss_pred eEECCCCcEEEeecCCccc
Q 042216 608 ILLDEEWVAKVSDFGLCKF 626 (767)
Q Consensus 608 ILld~~~~~ki~DfGla~~ 626 (767)
|++++++ +.|.||..+..
T Consensus 158 il~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 158 LVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred EEEeCCC-CEEEeccccCc
Confidence 9999876 78999998764
No 478
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.30 E-value=0.0039 Score=68.63 Aligned_cols=76 Identities=14% Similarity=0.076 Sum_probs=53.2
Q ss_pred eeeeccCcEEEEEEEecCCCceEEEEEeCCCC-------CcchhHHHHHHHHHhccc---cceeeeEeeeeecCCceEEE
Q 042216 481 LIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGS-------QQGALEFQTEIGMLSQLR---YLHLVSLIGYCNDDGQMILV 550 (767)
Q Consensus 481 ~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~-------~~~~~~f~~Ei~~l~~l~---Hpniv~l~g~~~~~~~~~lV 550 (767)
+.||.|.+..||++...++++.++||.-.+.. ......+..|.+.|..+. ..++.+++.+. .+..++|
T Consensus 32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D--~~~~~lV 109 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYD--EELAVTV 109 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCCCEEE
Confidence 36899999999999997654589999854221 223456777888888763 23456666653 3567899
Q ss_pred EecCCCCC
Q 042216 551 YDYMARGT 558 (767)
Q Consensus 551 ~ey~~~gs 558 (767)
|||+++..
T Consensus 110 ME~L~~~~ 117 (401)
T PRK09550 110 MEDLSDHK 117 (401)
T ss_pred EecCCCcc
Confidence 99998643
No 479
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.29 E-value=0.0042 Score=61.27 Aligned_cols=125 Identities=28% Similarity=0.334 Sum_probs=87.4
Q ss_pred hccccceeeeccCc-EEEEEEEecCCCceEEEEEeCC---CCC------------------cchhHHHHHHHHHhccc--
Q 042216 475 KDFNNLLIIGRGGF-GNVYKGFLNGDSTPVAIKRLNP---GSQ------------------QGALEFQTEIGMLSQLR-- 530 (767)
Q Consensus 475 ~~f~~~~~LG~G~f-G~Vy~g~~~~~~~~vAVK~l~~---~~~------------------~~~~~f~~Ei~~l~~l~-- 530 (767)
.+++.++.||.|.- |.||+++..+ +.+|+|.... ... .....|..|.+...+|+
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~g--~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEIDG--RIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEECC--eEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 78889999999999 9999999975 6899999321 100 11235888988888775
Q ss_pred -ccee--eeEeeeeecC------------------CceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHH
Q 042216 531 -YLHL--VSLIGYCNDD------------------GQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHY 589 (767)
Q Consensus 531 -Hpni--v~l~g~~~~~------------------~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~y 589 (767)
+.++ ++.+||..=. ....+|.||++... .+. .+-+.++.+-|..
T Consensus 115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-----------~~~----~~~~~~~~~dl~~ 179 (207)
T PF13095_consen 115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-----------PLQ----IRDIPQMLRDLKI 179 (207)
T ss_pred cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------ccc----hhHHHHHHHHHHH
Confidence 4455 8889887211 12346666665422 122 2334566677888
Q ss_pred hHhCCCCCeEecCCCCCCeEECCCCcEEEeecCCc
Q 042216 590 LHTGASKVIIHRDVKTTNILLDEEWVAKVSDFGLC 624 (767)
Q Consensus 590 LH~~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla 624 (767)
+| ..+|+-+|+++.|.. .-||+|||.+
T Consensus 180 ~~---k~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 180 LH---KLGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HH---HCCeeeccCcccccc-----CCEEEecccC
Confidence 99 788999999999986 4579999864
No 480
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.27 E-value=0.0019 Score=68.80 Aligned_cols=142 Identities=20% Similarity=0.161 Sum_probs=85.2
Q ss_pred ceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccce--eeeEeeee------ecCCceEEEE
Q 042216 480 LLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLH--LVSLIGYC------NDDGQMILVY 551 (767)
Q Consensus 480 ~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpn--iv~l~g~~------~~~~~~~lV~ 551 (767)
.+.|..|....+|+....+ ..+++|+... ....+...|++++..|++.. +.+++... ...+..++|+
T Consensus 19 i~~i~~G~~n~~y~v~~~~--~~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~ 93 (296)
T cd05153 19 FEGISAGIENTNYFVTTDS--GRYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALV 93 (296)
T ss_pred eecccCccccceEEEEeCC--CcEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEE
Confidence 4457778778999987654 3688898764 23345667888887775432 34444321 2234668999
Q ss_pred ecCCCCChhh----h----------hccC----CC-----CCCChHHHHH----------HHHHHHHHHHHhHh----CC
Q 042216 552 DYMARGTLRD----H----------LYNN----DN-----PPLPWDRRLK----------ICIGAARALHYLHT----GA 594 (767)
Q Consensus 552 ey~~~gsL~~----~----------L~~~----~~-----~~l~~~~~~~----------i~~~ia~gL~yLH~----~~ 594 (767)
+|++|..+.. . ||.. .. ....|..... ....+...+.++.. ..
T Consensus 94 ~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~ 173 (296)
T cd05153 94 EFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDL 173 (296)
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcC
Confidence 9999876532 0 1110 00 1122322211 11112334444442 12
Q ss_pred CCCeEecCCCCCCeEECCCCcEEEeecCCccc
Q 042216 595 SKVIIHRDVKTTNILLDEEWVAKVSDFGLCKF 626 (767)
Q Consensus 595 ~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~ 626 (767)
..+++|+|+.|.|||++++..+.|.||+.+..
T Consensus 174 ~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 174 PRGVIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred CCcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 35699999999999999987788999998764
No 481
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=96.99 E-value=0.0066 Score=64.88 Aligned_cols=141 Identities=22% Similarity=0.276 Sum_probs=82.8
Q ss_pred eeeeccCcEEEEEEEecCC------CceEEEEEeCCCCCcchhHHHHHHHHHhccccceee-eEeeeeecCCceEEEEec
Q 042216 481 LIIGRGGFGNVYKGFLNGD------STPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLV-SLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 481 ~~LG~G~fG~Vy~g~~~~~------~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv-~l~g~~~~~~~~~lV~ey 553 (767)
+.|..|-...+|+....++ ++.+++|+..... ....+..+|.+++..+....+. ++++++. + .+|+||
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~-~---~~v~e~ 78 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIFP-N---GRIEEF 78 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEeC-C---Cchhhe
Confidence 3466666678999887542 4678899876543 2334567888888888543333 4454443 2 358999
Q ss_pred CCCCChhhh-----------------hccCCCC---------CCChHHHHHH--------------------------HH
Q 042216 554 MARGTLRDH-----------------LYNNDNP---------PLPWDRRLKI--------------------------CI 581 (767)
Q Consensus 554 ~~~gsL~~~-----------------L~~~~~~---------~l~~~~~~~i--------------------------~~ 581 (767)
++|..+... ||+.... +.-|..+..+ ..
T Consensus 79 i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (302)
T cd05156 79 IPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLE 158 (302)
T ss_pred eCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHH
Confidence 988776431 1111110 0111111111 11
Q ss_pred HHHHHHHHhHh------CCCCCeEecCCCCCCeEECCC----CcEEEeecCCccc
Q 042216 582 GAARALHYLHT------GASKVIIHRDVKTTNILLDEE----WVAKVSDFGLCKF 626 (767)
Q Consensus 582 ~ia~gL~yLH~------~~~~~iiH~Dlk~~NILld~~----~~~ki~DfGla~~ 626 (767)
.+..-+..|.. .....++|+|+.+.|||++++ +.++++||..+..
T Consensus 159 ~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~ 213 (302)
T cd05156 159 DEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY 213 (302)
T ss_pred HHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence 11222333331 135679999999999999984 7899999998764
No 482
>PRK05231 homoserine kinase; Provisional
Probab=96.81 E-value=0.02 Score=61.69 Aligned_cols=159 Identities=14% Similarity=0.144 Sum_probs=85.8
Q ss_pred cccCHHHHHHHhhcccc-----ceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccc--eee
Q 042216 463 TQFSISEIKEATKDFNN-----LLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYL--HLV 535 (767)
Q Consensus 463 ~~~~~~ei~~~t~~f~~-----~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hp--niv 535 (767)
+..+.+++......|.. .+.|+.|....+|+....++ .+++|+... ....+...|+.++..|... .+.
T Consensus 5 t~ls~~~l~~~l~~y~~~~~~~~~~l~~G~~n~~y~v~t~~g--~~vLK~~~~---~~~~~l~~~~~~l~~L~~~glpvP 79 (319)
T PRK05231 5 TDVSDDELAAFLAPYDLGELLSLKGIAEGIENSNFFLTTTQG--EYVLTLFER---LTAEDLPFFLGLMQHLAARGVPVP 79 (319)
T ss_pred ccCCHHHHHHHHHhcCCchhhccchhccccccceEEEEeCCC--cEEEEEecc---CChHHhHHHHHHHHHHHHCCCCCC
Confidence 44556666665555543 23466677788999876543 588898752 1223334455555555321 122
Q ss_pred eEeee------eecCCceEEEEecCCCCChhh-----------h---hccCCC---------CCCCh-HHHHHHH-----
Q 042216 536 SLIGY------CNDDGQMILVYDYMARGTLRD-----------H---LYNNDN---------PPLPW-DRRLKIC----- 580 (767)
Q Consensus 536 ~l~g~------~~~~~~~~lV~ey~~~gsL~~-----------~---L~~~~~---------~~l~~-~~~~~i~----- 580 (767)
+.+.. ....+..++++||++|..+.. . +|.... ..+.| .....-.
T Consensus 80 ~~i~~~~G~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (319)
T PRK05231 80 APVARRDGAALGELAGKPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLA 159 (319)
T ss_pred cceeCCCCCEeeeeCCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccC
Confidence 33321 122456789999999875421 1 111100 01112 2211111
Q ss_pred -------HH-HHHHHHHhHhC----CCCCeEecCCCCCCeEECCCCcEEEeecCCccc
Q 042216 581 -------IG-AARALHYLHTG----ASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKF 626 (767)
Q Consensus 581 -------~~-ia~gL~yLH~~----~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~ 626 (767)
.+ +...+..+... ...++||+|+.+.|||++.+...-|.||+.+..
T Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~ 217 (319)
T PRK05231 160 DEQAALLEAELAAQLAFLASAAWPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFACN 217 (319)
T ss_pred hhHHHHHHHHHHHHHHhhhccccccCCcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence 11 11122222211 245799999999999999776668999998764
No 483
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=96.69 E-value=0.036 Score=59.37 Aligned_cols=158 Identities=15% Similarity=0.133 Sum_probs=89.7
Q ss_pred cCHHHHHHHhhcccc-----ceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccc--eeeeE
Q 042216 465 FSISEIKEATKDFNN-----LLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYL--HLVSL 537 (767)
Q Consensus 465 ~~~~ei~~~t~~f~~-----~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hp--niv~l 537 (767)
.+.++|....+.|.. ...++.|-...+|+....+ ..+++|+..... ...+...|++++..|... .+.++
T Consensus 7 ~~~~~l~~~l~~y~~~~~~~i~~~~~G~~n~~y~v~t~~--~~~vLK~~~~~~--~~~~i~~e~~~l~~L~~~g~pvp~~ 82 (307)
T TIGR00938 7 VSDEEMSSFLDGYDLGELLSLKGIAEGVENSNYLLTTDV--GRYILTLYEKRV--KAEELPFFLALTTHLAARGLPVPKP 82 (307)
T ss_pred CCHHHHHHHHHhcCCCCceeccccCCccccceEEEEeCC--CcEEEEEecCCC--CHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 444556555555533 3346667668899987543 357788775422 233455667777766422 23444
Q ss_pred eeee------ecCCceEEEEecCCCCChhhh--------------hccCCC---C-------CCChHHHHH---------
Q 042216 538 IGYC------NDDGQMILVYDYMARGTLRDH--------------LYNNDN---P-------PLPWDRRLK--------- 578 (767)
Q Consensus 538 ~g~~------~~~~~~~lV~ey~~~gsL~~~--------------L~~~~~---~-------~l~~~~~~~--------- 578 (767)
+... ...+..++++||++|..+... +|.... . .-.|.....
T Consensus 83 i~t~~g~~~~~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l 162 (307)
T TIGR00938 83 VKSRDGRQLSTLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQL 162 (307)
T ss_pred ccCCCCCeehhcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhccccc
Confidence 4422 223567899999988654211 111000 0 011221111
Q ss_pred ---HHHHHHHHHHHhHh----CCCCCeEecCCCCCCeEECCCCcEEEeecCCccc
Q 042216 579 ---ICIGAARALHYLHT----GASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKF 626 (767)
Q Consensus 579 ---i~~~ia~gL~yLH~----~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~ 626 (767)
....+.+.+.++.. ....+++|+|+.+.||++++++...|.||+.+..
T Consensus 163 ~~~~~~~l~~~~~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~ 217 (307)
T TIGR00938 163 EAHMGAELDKELDYLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFACT 217 (307)
T ss_pred CHHHHHHHHHHHHHHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeecccccC
Confidence 01122334555532 2357899999999999999887778999998754
No 484
>PLN02236 choline kinase
Probab=96.42 E-value=0.035 Score=60.49 Aligned_cols=140 Identities=18% Similarity=0.239 Sum_probs=81.7
Q ss_pred eeeccCcEEEEEEEecCC----CceEEEEEeCCCCCcchhHHHHHHHHHhccccceee-eEeeeeecCCceEEEEecCCC
Q 042216 482 IIGRGGFGNVYKGFLNGD----STPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLV-SLIGYCNDDGQMILVYDYMAR 556 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~----~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv-~l~g~~~~~~~~~lV~ey~~~ 556 (767)
.|-.|-.-.+|+....++ ++.+++|+....... ...-.+|..++..+...++. ++++.+. .+ .|+||+++
T Consensus 43 ~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~-~idR~~E~~~~~~l~~~gl~P~~~~~~~-~g---~v~efi~g 117 (344)
T PLN02236 43 PLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVEL-FFDRDDEIRTFECMSRHGQGPRLLGRFP-NG---RVEEFIHA 117 (344)
T ss_pred EcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCe-eechHHHHHHHHHHHHcCCCCceEEEEC-Cc---eEEEeeCC
Confidence 354566778999876432 357889988665432 22347788888888654444 3445442 22 58999987
Q ss_pred CChhhh-----------------hccCC----CCCCChHHHHHHHHHH-----------------HHHHHHh----Hh-C
Q 042216 557 GTLRDH-----------------LYNND----NPPLPWDRRLKICIGA-----------------ARALHYL----HT-G 593 (767)
Q Consensus 557 gsL~~~-----------------L~~~~----~~~l~~~~~~~i~~~i-----------------a~gL~yL----H~-~ 593 (767)
.+|... +|... .....|.++.++..++ ...+..| .. .
T Consensus 118 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~ 197 (344)
T PLN02236 118 RTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDD 197 (344)
T ss_pred CCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccC
Confidence 666421 11111 0112233333332111 1112222 11 2
Q ss_pred CCCCeEecCCCCCCeEECC-CCcEEEeecCCccc
Q 042216 594 ASKVIIHRDVKTTNILLDE-EWVAKVSDFGLCKF 626 (767)
Q Consensus 594 ~~~~iiH~Dlk~~NILld~-~~~~ki~DfGla~~ 626 (767)
....++|+|+++.|||+++ +..+.+.||..+..
T Consensus 198 ~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 198 QEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred CCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 2456899999999999986 46899999988764
No 485
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.34 E-value=0.046 Score=58.20 Aligned_cols=123 Identities=15% Similarity=0.260 Sum_probs=75.2
Q ss_pred CceEEEEEeC-CCCCcchhHHHHHHHHHhccc--cceeeeEeeeeecCC--ceEEEEecCCCCChhhhhccCCCCCCChH
Q 042216 500 STPVAIKRLN-PGSQQGALEFQTEIGMLSQLR--YLHLVSLIGYCNDDG--QMILVYDYMARGTLRDHLYNNDNPPLPWD 574 (767)
Q Consensus 500 ~~~vAVK~l~-~~~~~~~~~f~~Ei~~l~~l~--Hpniv~l~g~~~~~~--~~~lV~ey~~~gsL~~~L~~~~~~~l~~~ 574 (767)
++.+++.+-. ...........+|.++++.+. ..-+...+++|.++. ..+.||+|+++..+.+.+..... .
T Consensus 48 ~~~~vlR~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~~~~~-----~ 122 (321)
T COG3173 48 GQKYVLRKPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSALPPESL-----G 122 (321)
T ss_pred CceEEEecCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceeccCcCCcccc-----h
Confidence 4667777211 122334455677888887763 234455677787665 77999999998544433311110 0
Q ss_pred HHHHHH-HHHHHHHH--------------------------------------------------HhHhC-----CCCCe
Q 042216 575 RRLKIC-IGAARALH--------------------------------------------------YLHTG-----ASKVI 598 (767)
Q Consensus 575 ~~~~i~-~~ia~gL~--------------------------------------------------yLH~~-----~~~~i 598 (767)
.+++ ..+++.|. ||++. ....+
T Consensus 123 --~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~~~~p~~~~~~~l 200 (321)
T COG3173 123 --RQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLEANRPPWAGPPVL 200 (321)
T ss_pred --HHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHHhcCCCcCCCcee
Confidence 0111 13333333 33321 23468
Q ss_pred EecCCCCCCeEECCCCcEEEeecCCcccCCC
Q 042216 599 IHRDVKTTNILLDEEWVAKVSDFGLCKFGPN 629 (767)
Q Consensus 599 iH~Dlk~~NILld~~~~~ki~DfGla~~~~~ 629 (767)
+|+|+.+.|++++.+..+-|.||+++.++..
T Consensus 201 vHGD~~~gNlii~~~~~~gVlDwe~~~lGDP 231 (321)
T COG3173 201 VHGDYRPGNLIIDPGRPTGVLDWELATLGDP 231 (321)
T ss_pred eeCCcccCCEEEeCCCeeEEEeccccccCCc
Confidence 9999999999999988899999999987544
No 486
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.15 E-value=0.03 Score=59.09 Aligned_cols=76 Identities=17% Similarity=0.285 Sum_probs=47.8
Q ss_pred cccceeeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccc---cceeeeEeeeeecCCceEEEEec
Q 042216 477 FNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLR---YLHLVSLIGYCNDDGQMILVYDY 553 (767)
Q Consensus 477 f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~---Hpniv~l~g~~~~~~~~~lV~ey 553 (767)
....+.++.|....+|+.. .+++.+.||.-. ......|..|.+-|+.|. --.+.+.+++....+..+||+||
T Consensus 19 i~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~---~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~ 93 (288)
T PF03881_consen 19 ITSIEPVSGGDINEAYRLD--TDGGSYFVKVNS---ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEF 93 (288)
T ss_dssp --EEEEE--SSSSEEEEEE--TTS-EEEEEEEE---GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-
T ss_pred eeeeEecCCCChhheEEEE--CCCccEEEEecC---hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEe
Confidence 3445568889999999987 345789999875 333456888988888883 34677888888777777999999
Q ss_pred CCCC
Q 042216 554 MARG 557 (767)
Q Consensus 554 ~~~g 557 (767)
++.+
T Consensus 94 l~~~ 97 (288)
T PF03881_consen 94 LEMG 97 (288)
T ss_dssp ----
T ss_pred ecCC
Confidence 9876
No 487
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=95.89 E-value=0.006 Score=74.76 Aligned_cols=175 Identities=11% Similarity=-0.032 Sum_probs=117.4
Q ss_pred EEEEEeCCCCCcchhH-----HHHHHHHHhccccceeeeEeeeee--cCCceEEEEecCCCCChhhhhccCC--CCCCCh
Q 042216 503 VAIKRLNPGSQQGALE-----FQTEIGMLSQLRYLHLVSLIGYCN--DDGQMILVYDYMARGTLRDHLYNND--NPPLPW 573 (767)
Q Consensus 503 vAVK~l~~~~~~~~~~-----f~~Ei~~l~~l~Hpniv~l~g~~~--~~~~~~lV~ey~~~gsL~~~L~~~~--~~~l~~ 573 (767)
..+|+.+...-+...+ ...|...++...|+++.....-.. +..+.+..++|+..|.+.+.|.+.. .+.++.
T Consensus 1255 Fk~~I~ke~d~e~LsePlkemll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~ 1334 (2724)
T KOG1826|consen 1255 FKFSIYKEYDFENLSEPLKEMLLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDR 1334 (2724)
T ss_pred eEEEeehhhhHHHHhhHHHHhhhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchh
Confidence 3556655433222222 334444555667888776544332 3456788999999999999986542 233444
Q ss_pred HHHHHHHHHHHHHHHHhHh--CCCCCeEecCCCCCCeEECCCCcEEEeecCCcccCCCCCCccccccccCCCcccChhhh
Q 042216 574 DRRLKICIGAARALHYLHT--GASKVIIHRDVKTTNILLDEEWVAKVSDFGLCKFGPNFSKTHVSTQVKGSIGYLDPEYY 651 (767)
Q Consensus 574 ~~~~~i~~~ia~gL~yLH~--~~~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~ 651 (767)
........+......-.|. ....-.+|+++|+.|.+|..+.++|++++|+.++..+ .........+++-|+.|+..
T Consensus 1335 ~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp--~~sf~Gl~l~sp~~v~qli~ 1412 (2724)
T KOG1826|consen 1335 SPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNP--VLSFFGLELCSPIYVLQLIK 1412 (2724)
T ss_pred chHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecCCcccccccccccccCc--hHhhhhhhhCCHHHHHHHHH
Confidence 4444333333444444442 2234578999999999999999999999999984322 11122344577789999988
Q ss_pred ccCCCCchhhHHHHHHHHHHHHhCCCCC
Q 042216 652 RLQLLTEKSDVYSFGVVLLEVLCARPPI 679 (767)
Q Consensus 652 ~~~~~s~ksDV~SfGvvl~elltg~~P~ 679 (767)
..-.++.++|+|..|+-++++.-|..++
T Consensus 1413 N~ik~t~rsdilr~s~~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1413 NEIKFTKRSDILRRSLSLYLRSDGNAYF 1440 (2724)
T ss_pred HHHhhhhHHHHHHHHHHHHHHhcccHHH
Confidence 8888899999999999999998887775
No 488
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=95.83 E-value=0.0055 Score=67.47 Aligned_cols=50 Identities=16% Similarity=0.293 Sum_probs=38.8
Q ss_pred hhHHHHHHHHHhccccceeeeEeeeeecC-CceEEEEecCCCCChhhhhccC
Q 042216 516 ALEFQTEIGMLSQLRYLHLVSLIGYCNDD-GQMILVYDYMARGTLRDHLYNN 566 (767)
Q Consensus 516 ~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~-~~~~lV~ey~~~gsL~~~L~~~ 566 (767)
..++.-...+++.++|+|+...+.+.... ....+|+|++.. ||.+.+...
T Consensus 26 s~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~~~-Sled~~~~~ 76 (725)
T KOG1093|consen 26 SIQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHYTM-SLEDILKTG 76 (725)
T ss_pred HHHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhhcc-chHHHHHhc
Confidence 34566678889999999999999887654 357889999865 998887543
No 489
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=95.67 E-value=0.1 Score=56.37 Aligned_cols=81 Identities=19% Similarity=0.156 Sum_probs=50.1
Q ss_pred eeeccCcEEEEEEEecCCCceEEEEEeCCC-------CCcchhHHHHHHHHHhccc--cceeeeEeeeeecCCceEEEEe
Q 042216 482 IIGRGGFGNVYKGFLNGDSTPVAIKRLNPG-------SQQGALEFQTEIGMLSQLR--YLHLVSLIGYCNDDGQMILVYD 552 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~-------~~~~~~~f~~Ei~~l~~l~--Hpniv~l~g~~~~~~~~~lV~e 552 (767)
.||.|-..-||++...++++.|+||.-.+. -+....+..-|.+.|+... .|..++-+-++ +.+...+|||
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~-D~e~~~~vME 80 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF-DTEMAVTVME 80 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE-ccccceehHh
Confidence 478999999999998654467999975321 1223344556777776552 35444433233 3456679999
Q ss_pred cCCCC-Chhhhh
Q 042216 553 YMARG-TLRDHL 563 (767)
Q Consensus 553 y~~~g-sL~~~L 563 (767)
+++.. .|.+.|
T Consensus 81 dL~~~~ilR~~L 92 (370)
T TIGR01767 81 DLSHHKIARKGL 92 (370)
T ss_pred hCccchHHHHHH
Confidence 99643 344444
No 490
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=95.66 E-value=0.13 Score=54.23 Aligned_cols=32 Identities=31% Similarity=0.544 Sum_probs=26.4
Q ss_pred CCeEecCCCCCCeEECCCCc-EEEeecCCcccC
Q 042216 596 KVIIHRDVKTTNILLDEEWV-AKVSDFGLCKFG 627 (767)
Q Consensus 596 ~~iiH~Dlk~~NILld~~~~-~ki~DfGla~~~ 627 (767)
..++|+|+++.|||+++++. .-|.||+.+...
T Consensus 185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iG 217 (276)
T cd05152 185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKVG 217 (276)
T ss_pred CeeEeCCCCCCcEEEeCCCCEEEEECcHhcccC
Confidence 45899999999999997554 569999988754
No 491
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=95.60 E-value=0.014 Score=60.94 Aligned_cols=143 Identities=17% Similarity=0.096 Sum_probs=91.1
Q ss_pred CHHHHHHHhh---ccccceeeeccCcEEEEEEEecCCCceEEEEEeCCC--C---------------C-----cchhHHH
Q 042216 466 SISEIKEATK---DFNNLLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG--S---------------Q-----QGALEFQ 520 (767)
Q Consensus 466 ~~~ei~~~t~---~f~~~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~--~---------------~-----~~~~~f~ 520 (767)
.+.-|+...+ -++..+.||-|--+.+|.+-...+ ++.++|.-+.. + . .......
T Consensus 80 DyLAlktL~~R~~v~svGnqIGVGKESDIY~v~d~~G-~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~ 158 (465)
T KOG2268|consen 80 DYLALKTLSNRGSVESVGNQIGVGKESDIYVVADEEG-NPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAAT 158 (465)
T ss_pred hHHHHHHHHhcchhhhhccccccccccceEEEecCCC-CchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHH
Confidence 3444444433 245566899999999999988744 67888742211 0 0 0112245
Q ss_pred HHHHHHhcccc-c-eeeeEeeeeecCCceEEEEecCCCCChhhhhccCCCCCCChHHHHHHHHHHHHHHHHhHhCCCCCe
Q 042216 521 TEIGMLSQLRY-L-HLVSLIGYCNDDGQMILVYDYMARGTLRDHLYNNDNPPLPWDRRLKICIGAARALHYLHTGASKVI 598 (767)
Q Consensus 521 ~Ei~~l~~l~H-p-niv~l~g~~~~~~~~~lV~ey~~~gsL~~~L~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 598 (767)
+|...|+.|.. - -+.+.+++ +..++|||++.+-.|.+.-+- .+..++..- +..-+.-|. .+|+
T Consensus 159 kEfafmkaL~e~gfpVPkpiD~----~RH~Vvmelv~g~Pl~~v~~v-----~d~~~ly~~---lm~~Iv~la---~~Gl 223 (465)
T KOG2268|consen 159 KEFAFMKALYERGFPVPKPIDH----NRHCVVMELVDGYPLRQVRHV-----EDPPTLYDD---LMGLIVRLA---NHGL 223 (465)
T ss_pred HHHHHHHHHHHcCCCCCCcccc----cceeeHHHhhcccceeeeeec-----CChHHHHHH---HHHHHHHHH---HcCc
Confidence 67777777742 2 23334433 467899999998887764321 222333333 333344454 7889
Q ss_pred EecCCCCCCeEECCCCcEEEeecCCc
Q 042216 599 IHRDVKTTNILLDEEWVAKVSDFGLC 624 (767)
Q Consensus 599 iH~Dlk~~NILld~~~~~ki~DfGla 624 (767)
||+|..-=||+++++..++++||--+
T Consensus 224 IHgDFNEFNimv~dd~~i~vIDFPQm 249 (465)
T KOG2268|consen 224 IHGDFNEFNIMVKDDDKIVVIDFPQM 249 (465)
T ss_pred eecccchheeEEecCCCEEEeechHh
Confidence 99999999999999999999999654
No 492
>PLN02756 S-methyl-5-thioribose kinase
Probab=95.51 E-value=0.22 Score=54.89 Aligned_cols=80 Identities=18% Similarity=0.148 Sum_probs=51.7
Q ss_pred ceeeeccCcEEEEEEEecCCCceEEEEEeCCCCC-------cchhHHHHHHHHHhccc---cceeeeEeeeeecCCceEE
Q 042216 480 LLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQ-------QGALEFQTEIGMLSQLR---YLHLVSLIGYCNDDGQMIL 549 (767)
Q Consensus 480 ~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~-------~~~~~f~~Ei~~l~~l~---Hpniv~l~g~~~~~~~~~l 549 (767)
.+.||.|....||+....+ ..++||+-.+... .....-..|.+.|+.+. ..++.+++.+|. +..++
T Consensus 37 ~~eiggGn~N~VyrV~~~~--~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vl 112 (418)
T PLN02756 37 IKEVGDGNLNFVYIVVSSS--GSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALI 112 (418)
T ss_pred EEEcCCCceeeEEEEEcCC--ccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEE
Confidence 4468999999999987643 4689998652211 12333344566666553 247778888886 44678
Q ss_pred EEecCCC--CChhhhh
Q 042216 550 VYDYMAR--GTLRDHL 563 (767)
Q Consensus 550 V~ey~~~--gsL~~~L 563 (767)
+||++++ ..|.+.|
T Consensus 113 vME~L~~~~~ilr~~L 128 (418)
T PLN02756 113 GMRYLEPPHIILRKGL 128 (418)
T ss_pred EEeecCCcceehhhhh
Confidence 8999976 3455444
No 493
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=95.41 E-value=0.16 Score=55.12 Aligned_cols=140 Identities=20% Similarity=0.311 Sum_probs=80.7
Q ss_pred eeeccCcEEEEEEEecCC---CceEEEEEeCCCCCcchhHHHHHHHHHhccccceee-eEeeeeecCCceEEEEecCCCC
Q 042216 482 IIGRGGFGNVYKGFLNGD---STPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLV-SLIGYCNDDGQMILVYDYMARG 557 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~---~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv-~l~g~~~~~~~~~lV~ey~~~g 557 (767)
.|..|=-..+|+....+. ...+++|+...... ....-.+|..+++.+..-++. +++++. ..+ +|.+|+++.
T Consensus 21 ~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~-~~IdR~~E~~il~~l~~~gl~P~~l~~~-~~G---~i~~fi~g~ 95 (330)
T PLN02421 21 RISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTD-YVIDRERELQAIKYLSAAGFGAKLLGVF-GNG---MIQSFINAR 95 (330)
T ss_pred EeCCcccceEEEEEecCCCCCCceEEEEEecCCcC-eEechHHHHHHHHHHHhcCCCCceeEEe-CCc---EeehhhcCC
Confidence 354466677898876542 23788998865543 233447888888888655554 445554 222 589999776
Q ss_pred Chhhh-----------------hccCC----CCCCChHHHHHHHHHH----------------------HHHHHHhHh--
Q 042216 558 TLRDH-----------------LYNND----NPPLPWDRRLKICIGA----------------------ARALHYLHT-- 592 (767)
Q Consensus 558 sL~~~-----------------L~~~~----~~~l~~~~~~~i~~~i----------------------a~gL~yLH~-- 592 (767)
.|... ||... ..+--|..+.++..++ ..-+..+..
T Consensus 96 ~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 175 (330)
T PLN02421 96 TLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKEIT 175 (330)
T ss_pred CCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHHHh
Confidence 55321 11111 0111233332222221 111111111
Q ss_pred ---CCCCCeEecCCCCCCeEECC-CCcEEEeecCCccc
Q 042216 593 ---GASKVIIHRDVKTTNILLDE-EWVAKVSDFGLCKF 626 (767)
Q Consensus 593 ---~~~~~iiH~Dlk~~NILld~-~~~~ki~DfGla~~ 626 (767)
.....++|+|+.+.|||+++ ++.++++||..|..
T Consensus 176 ~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~ 213 (330)
T PLN02421 176 DSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY 213 (330)
T ss_pred ccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence 11235899999999999974 57899999998764
No 494
>PRK12396 5-methylribose kinase; Reviewed
Probab=95.24 E-value=0.095 Score=57.36 Aligned_cols=83 Identities=18% Similarity=0.164 Sum_probs=51.1
Q ss_pred ceeeeccCcEEEEEEEecCCCceEEEEEeCCC------CCcchhHHHHHHHHHhccc--cceeeeEeeeeecCCceEEEE
Q 042216 480 LLIIGRGGFGNVYKGFLNGDSTPVAIKRLNPG------SQQGALEFQTEIGMLSQLR--YLHLVSLIGYCNDDGQMILVY 551 (767)
Q Consensus 480 ~~~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~------~~~~~~~f~~Ei~~l~~l~--Hpniv~l~g~~~~~~~~~lV~ 551 (767)
...||.|--.-||++....+++.|+||.-.+. -+....+..-|.+.|+.+. .|..++-+-++ +.+...+||
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~-D~e~~~~vM 112 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF-DSVMNCCVM 112 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE-CcHHhhHHH
Confidence 34689999999999998533467999975322 1233445566777777653 35444433333 344667889
Q ss_pred ecCCCC-Chhhhh
Q 042216 552 DYMARG-TLRDHL 563 (767)
Q Consensus 552 ey~~~g-sL~~~L 563 (767)
|+++.. .|++.|
T Consensus 113 EdL~~~~ilR~~L 125 (409)
T PRK12396 113 EDLSDHTILRTAL 125 (409)
T ss_pred HhCcccHHHHHHH
Confidence 998542 344443
No 495
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=94.94 E-value=0.076 Score=53.43 Aligned_cols=121 Identities=22% Similarity=0.325 Sum_probs=60.0
Q ss_pred ceEEEEEeCCCCCcchhHHHHHHHHHhccccceee-eEeeeeecCCceEEEEecCCCCChhhh-h---------------
Q 042216 501 TPVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLV-SLIGYCNDDGQMILVYDYMARGTLRDH-L--------------- 563 (767)
Q Consensus 501 ~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv-~l~g~~~~~~~~~lV~ey~~~gsL~~~-L--------------- 563 (767)
+.|+||+..... .....-..|..+++.+....+. +++++.. ++ +|+||+++..|..- +
T Consensus 3 ~~~~~Ri~g~~t-~~~idr~~E~~~~~~l~~~g~~p~~~~~~~-~g---~v~e~i~g~~l~~~~~~~~~~~~~iA~~l~~ 77 (211)
T PF01633_consen 3 EKYLVRIPGEGT-ENFIDRENENEALKLLSEAGLGPKIIYFFE-NG---RVEEFIEGRTLSPEDFRNPEILKRIAKLLAK 77 (211)
T ss_dssp SEEEEEEEESCG-CSHHHHHHHHHHHHHHHHTTSSS-EEEEET-TE---EEEE--SSEE--CGGGGSHHHHHHHHHHHHH
T ss_pred CEEEEEeCCCCc-ccccCHHHHHHHHHHHHHcCCCCeEEEEcC-CC---cEEEEecccccChhhccChHHHHHHHHHHHH
Confidence 568888886553 3345567888888888655554 4444442 32 57799976655321 1
Q ss_pred -cc-----CCCCCCChHHHHHH----------------------HHHHHHHHHHhHh-----CCCCCeEecCCCCCCeEE
Q 042216 564 -YN-----NDNPPLPWDRRLKI----------------------CIGAARALHYLHT-----GASKVIIHRDVKTTNILL 610 (767)
Q Consensus 564 -~~-----~~~~~l~~~~~~~i----------------------~~~ia~gL~yLH~-----~~~~~iiH~Dlk~~NILl 610 (767)
|. .....--|..+..+ ...+..-+..+.+ .....++|+|+.+.|||+
T Consensus 78 lH~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~v~cHnDl~~~Nil~ 157 (211)
T PF01633_consen 78 LHSIPISPNSKKPDLWDRIDKYMNKKSEFLFKRKKKKKSIDKEDLEDLQEELEELEKLLEKSNSPLVFCHNDLNPGNILI 157 (211)
T ss_dssp HHTHHHTTSSSS-HHHHHHHHHHHHHHTCCCCHHTTTCHHHHHHHHHHHHHHHHHHHHHHTSCGGEEEE-S--SGGGEEE
T ss_pred HhhcccccccCcchHHHHhhhhccchhhhhhhhhhhccccccCCHHHHHHHHhhhhhhhhccCCCceEeeccCccccEEe
Confidence 00 00111112222222 0111111222211 112458999999999999
Q ss_pred -CCCCcEEEeecCCccc
Q 042216 611 -DEEWVAKVSDFGLCKF 626 (767)
Q Consensus 611 -d~~~~~ki~DfGla~~ 626 (767)
+.++.++++||..|..
T Consensus 158 ~~~~~~~~lIDfEya~~ 174 (211)
T PF01633_consen 158 NNKDGEVKLIDFEYAGY 174 (211)
T ss_dssp TSSSSCEEE--GTT-EE
T ss_pred ccCCCeEEEecHHHHhh
Confidence 8899999999998763
No 496
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=94.94 E-value=0.28 Score=52.79 Aligned_cols=136 Identities=21% Similarity=0.269 Sum_probs=79.1
Q ss_pred CcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhcccc---ceeee---Eeeee--ecCC--ceEEEEecCCC
Q 042216 487 GFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRY---LHLVS---LIGYC--NDDG--QMILVYDYMAR 556 (767)
Q Consensus 487 ~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H---pniv~---l~g~~--~~~~--~~~lV~ey~~~ 556 (767)
.-..+|+.+..++ .+++|..... ....++..|+..|..|.- +-.++ +=|-. .-.+ ..+-+++|++|
T Consensus 37 ~eN~~f~~~~~~g--~~iLki~~~~--~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l~G 112 (331)
T COG2334 37 EENSNFRVQTEDG--RYILKIYRPG--WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFEYLPG 112 (331)
T ss_pred ccCceEEEEecCC--CeEEEEecCC--CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEEecCC
Confidence 4567898888764 3488888765 344566677777777632 21122 21211 1123 77889999999
Q ss_pred CChhh-h--------------hcc----------CCCCCCChHH-------------HHHHHHHHHHHHHHhHh----CC
Q 042216 557 GTLRD-H--------------LYN----------NDNPPLPWDR-------------RLKICIGAARALHYLHT----GA 594 (767)
Q Consensus 557 gsL~~-~--------------L~~----------~~~~~l~~~~-------------~~~i~~~ia~gL~yLH~----~~ 594 (767)
..+.. . |+. .......|.. ......++...+..+.+ ..
T Consensus 113 ~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~~l 192 (331)
T COG2334 113 RPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLPAHL 192 (331)
T ss_pred cCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhchhhC
Confidence 88872 1 110 0011244541 01112233333444332 11
Q ss_pred CCC---eEecCCCCCCeEECCCCc-EEEeecCCccc
Q 042216 595 SKV---IIHRDVKTTNILLDEEWV-AKVSDFGLCKF 626 (767)
Q Consensus 595 ~~~---iiH~Dlk~~NILld~~~~-~ki~DfGla~~ 626 (767)
... +||+|+.+.|||++.+.. +.+.||+-+..
T Consensus 193 p~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~ 228 (331)
T COG2334 193 PALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAGY 228 (331)
T ss_pred CcccceeeecCCCccceeEcCCCCeeeEEEcccccc
Confidence 223 999999999999998874 89999998763
No 497
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=94.65 E-value=0.32 Score=51.99 Aligned_cols=31 Identities=32% Similarity=0.469 Sum_probs=26.4
Q ss_pred CCCeEecCCCCCCeEECCCCcEEEeecCCccc
Q 042216 595 SKVIIHRDVKTTNILLDEEWVAKVSDFGLCKF 626 (767)
Q Consensus 595 ~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~ 626 (767)
..+++|+|+.+.||+++. +.+.|.||+.+..
T Consensus 186 ~~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~ 216 (313)
T TIGR02906 186 IRGFCHQDYAYHNILLKD-NEVYVIDFDYCTI 216 (313)
T ss_pred cCceEcCCCCcccEEEeC-CcEEEEECccccc
Confidence 367899999999999998 5788999997653
No 498
>PTZ00384 choline kinase; Provisional
Probab=94.07 E-value=0.58 Score=51.64 Aligned_cols=75 Identities=15% Similarity=0.128 Sum_probs=45.5
Q ss_pred eeeccCcEEEEEEEecCCC-c-----eEEEEEeCCCCCcchhHHHHHHHHHhccccceeeeEeeeeecCCceEEEEecCC
Q 042216 482 IIGRGGFGNVYKGFLNGDS-T-----PVAIKRLNPGSQQGALEFQTEIGMLSQLRYLHLVSLIGYCNDDGQMILVYDYMA 555 (767)
Q Consensus 482 ~LG~G~fG~Vy~g~~~~~~-~-----~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~lV~ey~~ 555 (767)
.|..|--..+|++...++. . .|.++...... ....+-.+|++++..+...++.+-+-.+..+ .+++||++
T Consensus 57 ~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~-~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~~---g~l~efIe 132 (383)
T PTZ00384 57 KMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYN-SLVIDNDLQYNIAKLLGDNNFGPKIIGRFGD---FTIQEWVE 132 (383)
T ss_pred EeCCcccceEEEEEecCCCCCccccceEEEEeccCCC-ceEeccHHHHHHHHHHHhCCCCCeEEEecCC---EEEEEEec
Confidence 4555777889998765432 1 24444432222 2222346789999999766665554333332 59999999
Q ss_pred CCChh
Q 042216 556 RGTLR 560 (767)
Q Consensus 556 ~gsL~ 560 (767)
+..|.
T Consensus 133 Gr~l~ 137 (383)
T PTZ00384 133 GNTMG 137 (383)
T ss_pred cccCC
Confidence 87764
No 499
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=93.78 E-value=0.38 Score=51.59 Aligned_cols=32 Identities=22% Similarity=0.386 Sum_probs=28.7
Q ss_pred CCCeEecCCCCCCeEECCCCcEEEeecCCccc
Q 042216 595 SKVIIHRDVKTTNILLDEEWVAKVSDFGLCKF 626 (767)
Q Consensus 595 ~~~iiH~Dlk~~NILld~~~~~ki~DfGla~~ 626 (767)
..++||+|+.+.|+|+++++.+.|.||..+..
T Consensus 195 ~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 195 RTVLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred ceeeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 45799999999999999998999999988764
No 500
>PRK11768 serine/threonine protein kinase; Provisional
Probab=93.66 E-value=2.3 Score=45.98 Aligned_cols=96 Identities=13% Similarity=0.052 Sum_probs=55.0
Q ss_pred ccccCHHHHHHHhhccccc---e-eeeccCcEEEEEEEecCCCceEEEEEeCCCCCcchhHHHHHHHHHhccccc--eee
Q 042216 462 CTQFSISEIKEATKDFNNL---L-IIGRGGFGNVYKGFLNGDSTPVAIKRLNPGSQQGALEFQTEIGMLSQLRYL--HLV 535 (767)
Q Consensus 462 ~~~~~~~ei~~~t~~f~~~---~-~LG~G~fG~Vy~g~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~Hp--niv 535 (767)
...++.+.+..+...+... . ..-.+.-..||+....++ ..+++|..++. .....+...|++.+..|... .++
T Consensus 8 ~~~l~p~~~~~a~~~~g~~~~~~~~~l~s~eN~vy~v~~~~~-~~~vlKv~r~~-~~~~~~i~~E~~~l~~L~~~gipv~ 85 (325)
T PRK11768 8 FQTLTPDLILDALESLGLRVDGRLLALNSYENRVYQFGDEDG-RRVVAKFYRPE-RWSDAQILEEHAFALELAEAEIPVV 85 (325)
T ss_pred CCCCChHHHHHHHHHcCCCCccceEeeccccceEEEEecCCC-CEEEEEEcCcc-cCCHHHHHHHHHHHHHHHHCCCCCC
Confidence 3456777777776655331 1 122345577999877543 56888887533 23445667787777766321 122
Q ss_pred eEe---e--eeecCCceEEEEecCCCCCh
Q 042216 536 SLI---G--YCNDDGQMILVYDYMARGTL 559 (767)
Q Consensus 536 ~l~---g--~~~~~~~~~lV~ey~~~gsL 559 (767)
..+ | ....++..+.++++++|..+
T Consensus 86 ~p~~~~G~~~~~~~g~~~~l~~~~~G~~~ 114 (325)
T PRK11768 86 APLAFNGQTLHEHQGFRFALFPRRGGRAP 114 (325)
T ss_pred CCccCCCCEEEEECCEEEEEEeeeCCCCC
Confidence 211 1 12224567889999987643
Done!