BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042217
(270 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q86A88|DYL_DICDI Dynein light chain, cytoplasmic OS=Dictyostelium discoideum GN=dlcB
PE=3 SV=1
Length = 91
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 189 VKIVSVDMPPFMQIHAVDCARKTYDSLEKFTAKTLALTLKKEFDEVYGPAWHCIVGTSFG 248
+ + + DMP FMQ A +C K ++ E + +A+ +KKEFD+ Y P WHCIVG SFG
Sbjct: 8 INVKNADMPDFMQQDATECTIKAFE--ETNIERDIAMIIKKEFDKKYSPTWHCIVGKSFG 65
Query: 249 SFVTHSVGGFLYFSMDQKLYIL 270
SFVTH F+YF++++ +L
Sbjct: 66 SFVTHETKNFIYFNINKHSVLL 87
>sp|O02414|DYL1_HELCR Dynein light chain LC6, flagellar outer arm OS=Heliocidaris
crassispina PE=3 SV=1
Length = 89
Score = 79.3 bits (194), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/81 (50%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Query: 191 IVSVDMPPFMQIHAVDCARKTYDSLEKFT-AKTLALTLKKEFDEVYGPAWHCIVGTSFGS 249
I + DMP MQ AVDCA + +LEKF K +A +KKEFD+ Y P WHCIVG +FGS
Sbjct: 8 IKNADMPEDMQQDAVDCATQ---ALEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 64
Query: 250 FVTHSVGGFLYFSMDQKLYIL 270
+VTH F+YF + Q +L
Sbjct: 65 YVTHETKHFIYFYLGQVAVLL 85
>sp|Q39580|DYL1_CHLRE Dynein 8 kDa light chain, flagellar outer arm OS=Chlamydomonas
reinhardtii PE=1 SV=1
Length = 91
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Query: 191 IVSVDMPPFMQIHAVDCARKTYDSLEKFTA-KTLALTLKKEFDEVYGPAWHCIVGTSFGS 249
I + DM MQ AVDCA + +LEK+ K +A +KKEFD + P WHCIVG +FGS
Sbjct: 10 IKNADMSEEMQADAVDCATQ---ALEKYNIEKDIAAYIKKEFDRKHNPTWHCIVGRNFGS 66
Query: 250 FVTHSVGGFLYFSMDQKLYIL 270
+VTH F+YF + Q +L
Sbjct: 67 YVTHETKHFIYFYLGQVAILL 87
>sp|Q22799|DYL1_CAEEL Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans
GN=dlc-1 PE=1 SV=1
Length = 89
Score = 74.7 bits (182), Expect = 7e-13, Method: Composition-based stats.
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Query: 191 IVSVDMPPFMQIHAVDCARKTYDSLEKFT-AKTLALTLKKEFDEVYGPAWHCIVGTSFGS 249
I + DM MQ A+DCA + +LEK+ K +A +KKEFD+ Y P WHCIVG +FGS
Sbjct: 8 IKNADMSDDMQQDAIDCATQ---ALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 64
Query: 250 FVTHSVGGFLYFSMDQKLYIL 270
+VTH F+YF + Q +L
Sbjct: 65 YVTHETKHFIYFYLGQVAILL 85
>sp|Q24117|DYL1_DROME Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster GN=ctp
PE=1 SV=1
Length = 89
Score = 74.3 bits (181), Expect = 8e-13, Method: Composition-based stats.
Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Query: 191 IVSVDMPPFMQIHAVDCARKTYDSLEKFT-AKTLALTLKKEFDEVYGPAWHCIVGTSFGS 249
I + DM MQ AVDCA + +LEK+ K +A +KKEFD+ Y P WHCIVG +FGS
Sbjct: 8 IKNADMSEEMQQDAVDCATQ---ALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 64
Query: 250 FVTHSVGGFLYFSMDQKLYIL 270
+VTH F+YF + Q +L
Sbjct: 65 YVTHETRHFIYFYLGQVAILL 85
>sp|O96860|DYL2_DROME Dynein light chain 2, cytoplasmic OS=Drosophila melanogaster
GN=Cdlc2 PE=3 SV=1
Length = 89
Score = 74.3 bits (181), Expect = 9e-13, Method: Composition-based stats.
Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Query: 191 IVSVDMPPFMQIHAVDCARKTYDSLEKFT-AKTLALTLKKEFDEVYGPAWHCIVGTSFGS 249
I + DM MQ AVDCA + +LEK+ K +A +KKEFD+ Y P WHCIVG +FGS
Sbjct: 8 IKNADMSEEMQQDAVDCATQ---ALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGS 64
Query: 250 FVTHSVGGFLYFSMDQKLYIL 270
+VTH F+YF + Q +L
Sbjct: 65 YVTHETRHFIYFYLGQVAILL 85
>sp|Q78P75|DYL2_RAT Dynein light chain 2, cytoplasmic OS=Rattus norvegicus GN=Dynll2
PE=1 SV=1
Length = 89
Score = 73.6 bits (179), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Query: 191 IVSVDMPPFMQIHAVDCARKTYDSLEKFT-AKTLALTLKKEFDEVYGPAWHCIVGTSFGS 249
I + DM MQ AVDCA + ++EK+ K +A +KKEFD+ Y P WHCIVG +FGS
Sbjct: 8 IKNADMSEDMQQDAVDCATQ---AMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 64
Query: 250 FVTHSVGGFLYFSMDQKLYIL 270
+VTH F+YF + Q +L
Sbjct: 65 YVTHETKHFIYFYLGQVAILL 85
>sp|Q9D0M5|DYL2_MOUSE Dynein light chain 2, cytoplasmic OS=Mus musculus GN=Dynll2 PE=1
SV=1
Length = 89
Score = 73.6 bits (179), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Query: 191 IVSVDMPPFMQIHAVDCARKTYDSLEKFT-AKTLALTLKKEFDEVYGPAWHCIVGTSFGS 249
I + DM MQ AVDCA + ++EK+ K +A +KKEFD+ Y P WHCIVG +FGS
Sbjct: 8 IKNADMSEDMQQDAVDCATQ---AMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 64
Query: 250 FVTHSVGGFLYFSMDQKLYIL 270
+VTH F+YF + Q +L
Sbjct: 65 YVTHETKHFIYFYLGQVAILL 85
>sp|Q96FJ2|DYL2_HUMAN Dynein light chain 2, cytoplasmic OS=Homo sapiens GN=DYNLL2 PE=1
SV=1
Length = 89
Score = 73.6 bits (179), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Query: 191 IVSVDMPPFMQIHAVDCARKTYDSLEKFT-AKTLALTLKKEFDEVYGPAWHCIVGTSFGS 249
I + DM MQ AVDCA + ++EK+ K +A +KKEFD+ Y P WHCIVG +FGS
Sbjct: 8 IKNADMSEDMQQDAVDCATQ---AMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 64
Query: 250 FVTHSVGGFLYFSMDQKLYIL 270
+VTH F+YF + Q +L
Sbjct: 65 YVTHETKHFIYFYLGQVAILL 85
>sp|Q3MHR3|DYL2_BOVIN Dynein light chain 2, cytoplasmic OS=Bos taurus GN=DYNLL2 PE=3 SV=1
Length = 89
Score = 73.6 bits (179), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Query: 191 IVSVDMPPFMQIHAVDCARKTYDSLEKFT-AKTLALTLKKEFDEVYGPAWHCIVGTSFGS 249
I + DM MQ AVDCA + ++EK+ K +A +KKEFD+ Y P WHCIVG +FGS
Sbjct: 8 IKNADMSEDMQQDAVDCATQ---AMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 64
Query: 250 FVTHSVGGFLYFSMDQKLYIL 270
+VTH F+YF + Q +L
Sbjct: 65 YVTHETKHFIYFYLGQVAILL 85
>sp|P63170|DYL1_RAT Dynein light chain 1, cytoplasmic OS=Rattus norvegicus GN=Dynll1
PE=1 SV=1
Length = 89
Score = 72.0 bits (175), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Query: 191 IVSVDMPPFMQIHAVDCARKTYDSLEKFT-AKTLALTLKKEFDEVYGPAWHCIVGTSFGS 249
I + DM MQ +V+CA + +LEK+ K +A +KKEFD+ Y P WHCIVG +FGS
Sbjct: 8 IKNADMSEEMQQDSVECATQ---ALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGS 64
Query: 250 FVTHSVGGFLYFSMDQKLYIL 270
+VTH F+YF + Q +L
Sbjct: 65 YVTHETKHFIYFYLGQVAILL 85
>sp|P63169|DYL1_RABIT Dynein light chain 1, cytoplasmic OS=Oryctolagus cuniculus
GN=DYNLL1 PE=1 SV=1
Length = 89
Score = 72.0 bits (175), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Query: 191 IVSVDMPPFMQIHAVDCARKTYDSLEKFT-AKTLALTLKKEFDEVYGPAWHCIVGTSFGS 249
I + DM MQ +V+CA + +LEK+ K +A +KKEFD+ Y P WHCIVG +FGS
Sbjct: 8 IKNADMSEEMQQDSVECATQ---ALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGS 64
Query: 250 FVTHSVGGFLYFSMDQKLYIL 270
+VTH F+YF + Q +L
Sbjct: 65 YVTHETKHFIYFYLGQVAILL 85
>sp|P63168|DYL1_MOUSE Dynein light chain 1, cytoplasmic OS=Mus musculus GN=Dynll1 PE=1
SV=1
Length = 89
Score = 72.0 bits (175), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Query: 191 IVSVDMPPFMQIHAVDCARKTYDSLEKFT-AKTLALTLKKEFDEVYGPAWHCIVGTSFGS 249
I + DM MQ +V+CA + +LEK+ K +A +KKEFD+ Y P WHCIVG +FGS
Sbjct: 8 IKNADMSEEMQQDSVECATQ---ALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGS 64
Query: 250 FVTHSVGGFLYFSMDQKLYIL 270
+VTH F+YF + Q +L
Sbjct: 65 YVTHETKHFIYFYLGQVAILL 85
>sp|P61273|DYL1_MACFA Dynein light chain 1, cytoplasmic OS=Macaca fascicularis GN=DYNLL1
PE=3 SV=1
Length = 89
Score = 72.0 bits (175), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Query: 191 IVSVDMPPFMQIHAVDCARKTYDSLEKFT-AKTLALTLKKEFDEVYGPAWHCIVGTSFGS 249
I + DM MQ +V+CA + +LEK+ K +A +KKEFD+ Y P WHCIVG +FGS
Sbjct: 8 IKNADMSEEMQQDSVECATQ---ALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGS 64
Query: 250 FVTHSVGGFLYFSMDQKLYIL 270
+VTH F+YF + Q +L
Sbjct: 65 YVTHETKHFIYFYLGQVAILL 85
>sp|P63167|DYL1_HUMAN Dynein light chain 1, cytoplasmic OS=Homo sapiens GN=DYNLL1 PE=1
SV=1
Length = 89
Score = 72.0 bits (175), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Query: 191 IVSVDMPPFMQIHAVDCARKTYDSLEKFT-AKTLALTLKKEFDEVYGPAWHCIVGTSFGS 249
I + DM MQ +V+CA + +LEK+ K +A +KKEFD+ Y P WHCIVG +FGS
Sbjct: 8 IKNADMSEEMQQDSVECATQ---ALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGS 64
Query: 250 FVTHSVGGFLYFSMDQKLYIL 270
+VTH F+YF + Q +L
Sbjct: 65 YVTHETKHFIYFYLGQVAILL 85
>sp|P61285|DYL1_BOVIN Dynein light chain 1, cytoplasmic OS=Bos taurus GN=DYNLL1 PE=1 SV=1
Length = 89
Score = 72.0 bits (175), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Query: 191 IVSVDMPPFMQIHAVDCARKTYDSLEKFT-AKTLALTLKKEFDEVYGPAWHCIVGTSFGS 249
I + DM MQ +V+CA + +LEK+ K +A +KKEFD+ Y P WHCIVG +FGS
Sbjct: 8 IKNADMSEEMQQDSVECATQ---ALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGS 64
Query: 250 FVTHSVGGFLYFSMDQKLYIL 270
+VTH F+YF + Q +L
Sbjct: 65 YVTHETKHFIYFYLGQVAILL 85
>sp|Q9UR05|DYL1_SCHPO Dynein light chain 1, cytoplasmic OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dlc2 PE=3 SV=1
Length = 85
Score = 69.7 bits (169), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Query: 191 IVSVDMPPFMQIHAVDCARKTYDSLEKFT-AKTLALTLKKEFDEVYGPAWHCIVGTSFGS 249
I +VDM MQ A+ A + ++EKFT K +A +K+EFD+ + P WHCIVG +FGS
Sbjct: 4 IKAVDMSEKMQQEAIHAAVQ---AMEKFTIEKDIAAFIKREFDKKFSPTWHCIVGRNFGS 60
Query: 250 FVTHSVGGFLYFSMDQKLYIL 270
FVTH F+YF + ++L
Sbjct: 61 FVTHESRHFIYFYLGTVAFLL 81
>sp|Q94748|DYL2_SCHMA Probable dynein light chain OS=Schistosoma mansoni PE=3 SV=1
Length = 89
Score = 68.2 bits (165), Expect = 6e-11, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 191 IVSVDMPPFMQIHAVDCARKTYDSLEKFTAKTLALTLKKEFDEVYGPAWHCIVGTSFGSF 250
I + DM MQ AV A D E K +A +KKEFD Y P WHCIVG FGS+
Sbjct: 8 IKNADMHEDMQETAVHTAAAALDKYE--IEKDVAAYIKKEFDRKYNPNWHCIVGKHFGSY 65
Query: 251 VTHSVGGFLYFSMDQKLYIL 270
VTH F+YF + ++ ++L
Sbjct: 66 VTHETQHFIYFYLQERAFLL 85
>sp|Q94758|DYL1_SCHMA Dynein light chain OS=Schistosoma mansoni GN=DLC PE=1 SV=1
Length = 89
Score = 67.0 bits (162), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 191 IVSVDMPPFMQIHAVDCARKTYDSLEKFTAKTLALTLKKEFDEVYGPAWHCIVGTSFGSF 250
I + DM MQ A+ A D + K +A +KK+FD Y P WHCIVG FGS+
Sbjct: 8 IKNADMSEEMQEDAIHIAAGAIDKHD--LEKDIAANIKKDFDRKYHPTWHCIVGRHFGSY 65
Query: 251 VTHSVGGFLYFSMDQKLYIL 270
VTH F+YF +D + ++L
Sbjct: 66 VTHETHNFIYFYLDDRAFLL 85
>sp|O94111|DYL1_EMENI Dynein light chain, cytoplasmic OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nudG
PE=3 SV=1
Length = 94
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 190 KIVSVDMPPFMQIHAVDCARKTYDSLEKF-TAKTLALTLKKEFDEVYGPAWHCIVGTSFG 248
+I SVDM MQ AV+ A +++EK+ K +A +K+EFD G WHC+VG +FG
Sbjct: 12 QIKSVDMSEDMQQEAVEVA---IEAMEKYHIEKDIAQYIKREFDSRKGATWHCVVGRNFG 68
Query: 249 SFVTHSVGGFLYFSM 263
SFVTH F+YF +
Sbjct: 69 SFVTHETKHFIYFYL 83
>sp|Q6BZF8|DYL1_DEBHA Dynein light chain 1, cytoplasmic OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DYN2 PE=3 SV=1
Length = 91
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 195 DMPPFMQIHAVDCARKTYDSLEKFTAKTLALTLKKEFDEVYGPAWHCIVGTSFGSFVTHS 254
D+P MQ + + + + + K +A LKKE D++YG WH IVG SFGS+VTH
Sbjct: 14 DLPEEMQTRIFELSNEAVSNYK--IEKDIATYLKKELDQLYGATWHVIVGKSFGSYVTHE 71
Query: 255 VGGFLYFSMDQKLYIL 270
G F YF + Q +++
Sbjct: 72 QGFFTYFYIGQLAFLI 87
>sp|Q02647|DYL1_YEAST Dynein light chain 1, cytoplasmic OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DYN2 PE=1 SV=1
Length = 92
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 213 DSLEKF-TAKTLALTLKKEFDEVYGPAWHCIVGTSFGSFVTHSVGGFLYFSM 263
D+L+K+ + +A T+KK+ D YG WH IVG +FGS+VTH G F+YF +
Sbjct: 30 DALDKYQLERDIAGTVKKQLDVKYGNTWHVIVGKNFGSYVTHEKGHFVYFYI 81
>sp|Q6FUJ0|DYL1_CANGA Dynein light chain 1, cytoplasmic OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DYN2 PE=3 SV=1
Length = 86
Score = 54.7 bits (130), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/41 (56%), Positives = 28/41 (68%)
Query: 221 KTLALTLKKEFDEVYGPAWHCIVGTSFGSFVTHSVGGFLYF 261
+ +A +KKE D YG WH IVG SFGS+VTH G F+YF
Sbjct: 34 REIASVIKKEMDSRYGHTWHVIVGRSFGSYVTHEKGKFVYF 74
>sp|Q759T0|DYL1_ASHGO Dynein light chain 1, cytoplasmic OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DYN2
PE=3 SV=1
Length = 88
Score = 52.8 bits (125), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 214 SLEKFT-AKTLALTLKKEFDEVYGPAWHCIVGTSFGSFVTHSVGGFLYF 261
++E+F + +A +KKE D +G WH IVG +FGS+VTH G F+YF
Sbjct: 27 AVEQFQLEREVAAYIKKELDSKHGQTWHVIVGKNFGSYVTHEKGHFIYF 75
>sp|Q6CWX4|DYL1_KLULA Dynein light chain 1, cytoplasmic OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DYN2 PE=3 SV=1
Length = 87
Score = 47.8 bits (112), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 221 KTLALTLKKEFDEVYGPAWHCIVGTSFGSFVTHSVGGFLYF 261
+ +A +KK+ D G WH IVG +FGS+VTH G F+YF
Sbjct: 34 REIAAYIKKQLDVSQGETWHVIVGKNFGSYVTHEKGYFVYF 74
>sp|Q9DCM4|DNAL4_MOUSE Dynein light chain 4, axonemal OS=Mus musculus GN=Dnal4 PE=2 SV=2
Length = 105
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 195 DMPPFMQIHAVDCARKTYDSLEKFTA--KTLALTLKKEFDEVYGPAWHCIVGTSFGSFVT 252
DMP M++ ++ + EKF+ ++ A +K+ D+ +G +WH ++G FG +T
Sbjct: 26 DMPEEMRVETMELC---VTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFEIT 82
Query: 253 HSVGGFLYFSMDQKLYI 269
H V LY L +
Sbjct: 83 HEVKNLLYLYFGGTLAV 99
>sp|A4F4L4|DNAL4_PIG Dynein light chain 4, axonemal OS=Sus scrofa GN=DNAL4 PE=3 SV=1
Length = 105
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 195 DMPPFMQIHAVDCARKTYDSLEKFTA--KTLALTLKKEFDEVYGPAWHCIVGTSFGSFVT 252
DMP M++ ++ + EKF+ ++ A +K+ D+ +G +WH ++G FG +T
Sbjct: 26 DMPEEMRVETMELC---VTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFEIT 82
Query: 253 HSVGGFLYFSMDQKLYI 269
H V LY L +
Sbjct: 83 HEVKNLLYLYFGGTLAV 99
>sp|O96015|DNAL4_HUMAN Dynein light chain 4, axonemal OS=Homo sapiens GN=DNAL4 PE=2 SV=1
Length = 105
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 195 DMPPFMQIHAVDCARKTYDSLEKFTA--KTLALTLKKEFDEVYGPAWHCIVGTSFGSFVT 252
DMP M++ ++ + EKF+ ++ A +K+ D+ +G +WH ++G FG +T
Sbjct: 26 DMPEEMRVETMELC---VTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFEIT 82
Query: 253 HSVGGFLYFSMDQKLYI 269
H V LY L +
Sbjct: 83 HEVKNLLYLYFGGTLAV 99
>sp|Q32KN5|DNAL4_BOVIN Dynein light chain 4, axonemal OS=Bos taurus GN=DNAL4 PE=3 SV=1
Length = 105
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 195 DMPPFMQIHAVDCARKTYDSLEKFTA--KTLALTLKKEFDEVYGPAWHCIVGTSFGSFVT 252
DMP M++ ++ + EKF+ ++ A +K+ D+ +G +WH ++G FG +T
Sbjct: 26 DMPEEMRVETMELC---VTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFEIT 82
Query: 253 HSVGGFLYFSMDQKLYI 269
H V LY L +
Sbjct: 83 HEVKNLLYLYFGGTLAV 99
>sp|Q39579|DYL2_CHLRE Dynein 11 kDa light chain, flagellar outer arm OS=Chlamydomonas
reinhardtii PE=1 SV=1
Length = 120
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 190 KIVSVDMPPFMQIHAVDCARKTYDSLEKFTAKTLALTLKKEFDEVY---GPA----WHCI 242
KI++ MP + AV A D + K +A +K E+D+ Y G A +HCI
Sbjct: 22 KIITSYMPESFEQDAVQIALIAVDKYRQL--KDIAFYIKHEYDKKYPGSGKATEGVYHCI 79
Query: 243 VGTSFGSFVTHSVGGFLYFSMDQKLYIL 270
VG SF S V+H F++ +D IL
Sbjct: 80 VGKSFASAVSHETRQFIHMKVDTYHVIL 107
>sp|Q21557|DYL2_CAEEL Probable dynein light chain 2, cytoplasmic OS=Caenorhabditis
elegans GN=dlc-2 PE=3 SV=2
Length = 90
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 200 MQIHAVDCARKTYDSLEKFTAKTLALTLKKEFDEVYGPAWHCIVGTSFGSFVTHSVGGFL 259
M I V A++ Y+ K +A +K+E D+ +G WH I G FGS V++ +G F+
Sbjct: 20 MVISVVREAQRLYN-----IDKDVAAFVKEELDKKFGATWHVICGKCFGSRVSYEMGHFI 74
>sp|A5EX70|RPOB_DICNV DNA-directed RNA polymerase subunit beta OS=Dichelobacter nodosus
(strain VCS1703A) GN=rpoB PE=3 SV=1
Length = 1361
Score = 32.0 bits (71), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 11 KSIIKTKTSHPTETNLDAPRSSKPFYYMSNNWSRLNLYRNE-ARASQKQIVNPPSKDIHL 69
++I K S +++L P ++R + ++E A+A +K ++ +KDI
Sbjct: 910 RAIFGEKASDVKDSSLRVPTGMDGTVVDVRVYTRDGIEKDERAKAIEKMEIDSIAKDIKD 969
Query: 70 QARAMTVSADSDISRFLLNKPSKQQPQRKAKES 102
Q R + +R LL + K+ P+RK+ ++
Sbjct: 970 QLRIFSADIHDRAARLLLGQAIKKAPKRKSGDT 1002
>sp|A7YVH9|PYRD1_BOVIN Pyridine nucleotide-disulfide oxidoreductase domain-containing
protein 1 OS=Bos taurus GN=PYROXD1 PE=2 SV=1
Length = 502
Score = 31.2 bits (69), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 79 DSDISRFLLNKPSKQQPQRKA--KESRRTTEASKEELKKSAKGGSVNSLNMGAFDCEEGL 136
D+ + FL +K ++P+ K K +R TTE K+E + A G+V S +G D EGL
Sbjct: 186 DAGAAEFLTSKLIDEKPEAKIAQKRTRYTTEGRKKETQARASAGNVGSA-LGP-DWHEGL 243
Query: 137 ESK 139
+ K
Sbjct: 244 DLK 246
>sp|Q9VNH6|EXOC4_DROME Exocyst complex component 4 OS=Drosophila melanogaster GN=sec8 PE=1
SV=3
Length = 985
Score = 30.8 bits (68), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 9/108 (8%)
Query: 45 LNLYRNEARASQKQIVNPPSKDIHLQARAMTVSADSDISRFLLNKPS-------KQQPQR 97
L YR +A+ + IV P S+D + + A D DISRFL P+ Q+ +
Sbjct: 617 LKAYREICQAAYRGIVQPDSEDKRIYSVAWL--KDEDISRFLKTLPNWTDLKTYSQKSRH 674
Query: 98 KAKESRRTTEASKEELKKSAKGGSVNSLNMGAFDCEEGLESKKLVFVK 145
K R + E S+EE + ++ M + EG +++ + V+
Sbjct: 675 NRKLHRGSFEPSEEESPLQVQQRNIREAEMLTSNLGEGGITQQEILVE 722
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.130 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,596,553
Number of Sequences: 539616
Number of extensions: 3550840
Number of successful extensions: 12879
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 12790
Number of HSP's gapped (non-prelim): 128
length of query: 270
length of database: 191,569,459
effective HSP length: 116
effective length of query: 154
effective length of database: 128,974,003
effective search space: 19861996462
effective search space used: 19861996462
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)