Query 042220
Match_columns 255
No_of_seqs 323 out of 2684
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 04:03:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042220.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042220hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF13962 PGG: Domain of unknow 99.9 7.6E-27 1.7E-31 175.1 11.9 112 104-216 1-113 (113)
2 KOG4412 26S proteasome regulat 99.8 4.8E-20 1E-24 144.4 3.7 94 2-98 26-120 (226)
3 KOG4412 26S proteasome regulat 99.8 4.7E-19 1E-23 138.9 5.2 108 6-118 65-179 (226)
4 KOG0512 Fetal globin-inducing 99.7 5.1E-17 1.1E-21 126.7 5.5 88 2-94 86-173 (228)
5 KOG0509 Ankyrin repeat and DHH 99.6 1.1E-15 2.4E-20 139.6 11.7 139 5-149 70-250 (600)
6 PHA02743 Viral ankyrin protein 99.6 1.1E-15 2.4E-20 122.3 7.2 85 6-94 50-138 (166)
7 PHA02741 hypothetical protein; 99.6 3E-15 6.4E-20 120.1 8.1 88 5-96 52-144 (169)
8 KOG0510 Ankyrin repeat protein 99.6 3.3E-15 7.2E-20 139.5 7.4 131 4-138 264-404 (929)
9 PHA02736 Viral ankyrin protein 99.6 1.2E-15 2.7E-20 120.3 3.9 86 7-96 49-138 (154)
10 PHA02791 ankyrin-like protein; 99.6 8.3E-15 1.8E-19 126.7 8.4 85 7-98 24-108 (284)
11 PHA02878 ankyrin repeat protei 99.6 7.4E-15 1.6E-19 136.1 8.6 137 6-149 160-305 (477)
12 PHA02874 ankyrin repeat protei 99.6 1E-14 2.2E-19 133.7 8.9 88 6-98 117-204 (434)
13 PHA02741 hypothetical protein; 99.6 5.4E-15 1.2E-19 118.6 5.8 89 4-97 12-111 (169)
14 KOG0509 Ankyrin repeat and DHH 99.5 8.3E-15 1.8E-19 133.9 7.2 89 5-97 103-191 (600)
15 PHA02859 ankyrin repeat protei 99.5 8.1E-14 1.8E-18 115.6 11.7 84 6-94 44-133 (209)
16 PHA02875 ankyrin repeat protei 99.5 1.7E-14 3.6E-19 131.3 8.2 82 13-97 67-148 (413)
17 PHA02791 ankyrin-like protein; 99.5 1.9E-14 4.1E-19 124.4 7.8 130 13-147 60-196 (284)
18 KOG0510 Ankyrin repeat protein 99.5 6E-13 1.3E-17 124.6 18.0 89 5-97 298-390 (929)
19 PHA02875 ankyrin repeat protei 99.5 3.8E-14 8.2E-19 128.9 8.6 87 7-98 96-182 (413)
20 PHA02946 ankyin-like protein; 99.5 3.8E-14 8.2E-19 130.2 8.6 84 5-91 64-148 (446)
21 KOG0195 Integrin-linked kinase 99.5 3.2E-14 6.9E-19 119.3 6.3 89 5-98 26-114 (448)
22 PHA02884 ankyrin repeat protei 99.5 7.9E-14 1.7E-18 121.0 8.9 84 9-97 28-117 (300)
23 PF12796 Ank_2: Ankyrin repeat 99.5 1.3E-13 2.8E-18 98.5 8.0 72 18-97 1-72 (89)
24 PHA02743 Viral ankyrin protein 99.5 5.2E-14 1.1E-18 112.6 6.7 88 6-98 13-108 (166)
25 PHA02874 ankyrin repeat protei 99.5 2.1E-13 4.5E-18 125.0 11.5 86 6-96 150-235 (434)
26 PHA03100 ankyrin repeat protei 99.5 9.6E-14 2.1E-18 128.5 8.1 87 7-98 100-190 (480)
27 KOG0514 Ankyrin repeat protein 99.5 1.3E-13 2.9E-18 118.7 7.4 128 5-136 260-442 (452)
28 PLN03192 Voltage-dependent pot 99.5 1.4E-13 3.1E-18 135.3 8.1 88 6-98 551-669 (823)
29 PHA03095 ankyrin-like protein; 99.4 1.6E-13 3.4E-18 126.7 7.8 88 6-98 215-304 (471)
30 PHA02859 ankyrin repeat protei 99.4 3E-13 6.5E-18 112.2 8.2 87 6-96 79-171 (209)
31 PF13637 Ank_4: Ankyrin repeat 99.4 2.8E-13 6.1E-18 87.8 6.3 54 14-70 1-54 (54)
32 PHA03095 ankyrin-like protein; 99.4 5.5E-13 1.2E-17 123.1 10.7 85 5-94 39-127 (471)
33 KOG4177 Ankyrin [Cell wall/mem 99.4 1.2E-13 2.7E-18 135.4 6.6 88 6-98 533-620 (1143)
34 PF13857 Ank_5: Ankyrin repeat 99.4 1.1E-13 2.4E-18 90.4 4.0 56 33-91 1-56 (56)
35 PHA02716 CPXV016; CPX019; EVM0 99.4 3.7E-13 7.9E-18 129.2 9.1 84 5-93 204-326 (764)
36 PHA02736 Viral ankyrin protein 99.4 7.2E-14 1.6E-18 110.2 3.4 88 4-97 8-105 (154)
37 KOG0508 Ankyrin repeat protein 99.4 7.2E-14 1.6E-18 123.9 3.6 88 6-98 110-197 (615)
38 PHA02878 ankyrin repeat protei 99.4 3.1E-13 6.7E-18 125.3 7.7 85 5-94 193-279 (477)
39 PLN03192 Voltage-dependent pot 99.4 3.5E-13 7.5E-18 132.6 8.2 133 13-149 524-660 (823)
40 PHA03100 ankyrin repeat protei 99.4 4.1E-13 8.9E-18 124.3 7.8 139 6-149 134-288 (480)
41 PHA02946 ankyin-like protein; 99.4 7.8E-13 1.7E-17 121.6 8.9 139 5-149 97-247 (446)
42 PHA02716 CPXV016; CPX019; EVM0 99.4 8.3E-13 1.8E-17 126.7 8.5 85 6-93 169-256 (764)
43 KOG0502 Integral membrane anky 99.4 2.5E-13 5.3E-18 110.0 3.7 89 4-97 151-239 (296)
44 PHA02884 ankyrin repeat protei 99.4 9.8E-13 2.1E-17 114.2 7.8 83 10-97 67-150 (300)
45 PF13857 Ank_5: Ankyrin repeat 99.4 4.3E-13 9.3E-18 87.6 4.1 51 3-55 6-56 (56)
46 PF12796 Ank_2: Ankyrin repeat 99.4 1.2E-12 2.6E-17 93.4 6.7 64 14-81 26-89 (89)
47 PHA02795 ankyrin-like protein; 99.4 1E-12 2.2E-17 118.7 7.5 80 13-96 187-266 (437)
48 PHA02876 ankyrin repeat protei 99.4 1.4E-12 3.1E-17 126.0 8.8 86 6-96 300-387 (682)
49 PHA02876 ankyrin repeat protei 99.4 1.2E-12 2.6E-17 126.5 8.0 85 6-95 266-352 (682)
50 PHA02798 ankyrin-like protein; 99.4 1.4E-12 3.1E-17 121.3 7.5 87 5-96 63-157 (489)
51 KOG0514 Ankyrin repeat protein 99.4 9.3E-13 2E-17 113.5 5.6 90 6-98 332-421 (452)
52 PHA02989 ankyrin repeat protei 99.3 4.8E-12 1E-16 117.9 7.8 49 45-96 253-301 (494)
53 cd00204 ANK ankyrin repeats; 99.3 1.3E-11 2.9E-16 91.9 8.2 84 8-96 2-85 (126)
54 PHA02989 ankyrin repeat protei 99.3 1.2E-11 2.6E-16 115.3 9.4 85 6-94 101-191 (494)
55 PHA02798 ankyrin-like protein; 99.3 1.4E-11 3E-16 114.7 9.7 87 5-94 101-192 (489)
56 PHA02730 ankyrin-like protein; 99.3 1.1E-11 2.4E-16 117.2 7.6 81 8-93 36-123 (672)
57 PHA02917 ankyrin-like protein; 99.2 1.3E-11 2.8E-16 118.3 7.4 88 5-97 128-242 (661)
58 KOG0195 Integrin-linked kinase 99.2 8E-12 1.7E-16 105.0 5.0 84 5-93 59-142 (448)
59 KOG4214 Myotrophin and similar 99.2 2.6E-11 5.6E-16 85.4 5.8 74 13-90 33-106 (117)
60 COG0666 Arp FOG: Ankyrin repea 99.2 2.9E-11 6.2E-16 99.2 7.2 88 6-97 99-193 (235)
61 KOG0508 Ankyrin repeat protein 99.2 8.1E-12 1.7E-16 111.0 3.9 87 6-98 143-229 (615)
62 PHA02917 ankyrin-like protein; 99.2 3.2E-11 6.9E-16 115.6 8.2 83 6-93 389-494 (661)
63 KOG0512 Fetal globin-inducing 99.2 2.7E-11 5.7E-16 94.9 6.0 79 17-98 66-144 (228)
64 TIGR00870 trp transient-recept 99.2 3.1E-11 6.7E-16 117.7 6.7 79 13-95 127-219 (743)
65 PHA02795 ankyrin-like protein; 99.1 6.7E-11 1.5E-15 107.0 6.7 82 14-98 149-235 (437)
66 cd00204 ANK ankyrin repeats; 99.1 1.8E-10 4E-15 85.7 8.0 85 7-96 34-118 (126)
67 PTZ00322 6-phosphofructo-2-kin 99.1 8.5E-11 1.8E-15 113.0 7.5 78 17-98 85-162 (664)
68 PF13637 Ank_4: Ankyrin repeat 99.1 7.1E-11 1.5E-15 76.4 4.3 47 48-97 1-47 (54)
69 PHA02792 ankyrin-like protein; 99.1 2.5E-10 5.4E-15 107.2 7.4 83 6-93 365-452 (631)
70 KOG4177 Ankyrin [Cell wall/mem 99.1 1.5E-10 3.2E-15 114.1 6.0 81 14-98 507-587 (1143)
71 KOG1710 MYND Zn-finger and ank 99.1 3.4E-10 7.5E-15 95.2 6.8 90 5-98 37-126 (396)
72 KOG0505 Myosin phosphatase, re 99.1 1.8E-10 3.9E-15 103.9 5.4 139 7-150 67-237 (527)
73 PHA02730 ankyrin-like protein; 99.0 4.4E-10 9.5E-15 106.5 7.6 84 6-94 410-506 (672)
74 KOG0507 CASK-interacting adapt 99.0 1.4E-10 3E-15 108.3 3.9 91 3-98 39-129 (854)
75 KOG3676 Ca2+-permeable cation 99.0 1.6E-08 3.6E-13 95.4 17.3 83 12-98 238-322 (782)
76 PTZ00322 6-phosphofructo-2-kin 99.0 4.6E-10 1E-14 108.0 7.2 85 5-94 107-198 (664)
77 KOG4214 Myotrophin and similar 99.0 4.7E-10 1E-14 79.1 5.2 78 16-98 4-81 (117)
78 PHA02792 ankyrin-like protein; 99.0 2.6E-10 5.7E-15 107.0 5.0 87 5-95 97-226 (631)
79 TIGR00870 trp transient-recept 99.0 1.8E-09 3.8E-14 105.5 10.8 113 5-121 44-218 (743)
80 KOG0502 Integral membrane anky 99.0 3.7E-10 8.1E-15 91.7 4.0 81 13-97 192-272 (296)
81 KOG3676 Ca2+-permeable cation 98.9 1E-09 2.2E-14 103.4 6.1 83 8-94 178-283 (782)
82 KOG0515 p53-interacting protei 98.9 1.4E-09 3E-14 98.0 4.9 71 20-94 556-626 (752)
83 KOG0505 Myosin phosphatase, re 98.9 2.1E-09 4.6E-14 97.0 5.1 81 8-93 193-273 (527)
84 KOG0783 Uncharacterized conser 98.9 1E-09 2.2E-14 103.4 2.9 86 4-94 43-129 (1267)
85 KOG0507 CASK-interacting adapt 98.8 1.5E-09 3.2E-14 101.5 3.4 91 3-98 72-162 (854)
86 COG0666 Arp FOG: Ankyrin repea 98.8 1.2E-08 2.5E-13 83.6 7.9 87 8-97 68-160 (235)
87 KOG0515 p53-interacting protei 98.7 5.8E-08 1.3E-12 87.8 8.4 78 8-90 578-656 (752)
88 KOG0506 Glutaminase (contains 98.7 1.2E-08 2.6E-13 91.1 3.6 83 13-98 505-587 (622)
89 KOG0818 GTPase-activating prot 98.6 6.6E-08 1.4E-12 86.7 6.5 79 17-98 136-214 (669)
90 PF00023 Ank: Ankyrin repeat H 98.6 7.7E-08 1.7E-12 55.5 3.9 32 13-45 1-32 (33)
91 PF13606 Ank_3: Ankyrin repeat 98.6 7E-08 1.5E-12 54.4 3.5 28 13-40 1-28 (30)
92 KOG1710 MYND Zn-finger and ank 98.5 3.9E-07 8.4E-12 77.0 6.6 81 14-98 12-93 (396)
93 PF00023 Ank: Ankyrin repeat H 98.5 2.1E-07 4.5E-12 53.7 3.4 33 47-82 1-33 (33)
94 PF13606 Ank_3: Ankyrin repeat 98.4 3E-07 6.5E-12 51.8 2.8 30 47-79 1-30 (30)
95 KOG0782 Predicted diacylglycer 98.3 6.6E-07 1.4E-11 81.7 5.7 84 7-94 893-977 (1004)
96 KOG0522 Ankyrin repeat protein 98.3 1.5E-06 3.2E-11 78.9 6.6 61 6-70 48-108 (560)
97 KOG0522 Ankyrin repeat protein 98.2 4.7E-06 1E-10 75.7 6.8 80 16-98 22-102 (560)
98 KOG0705 GTPase-activating prot 98.1 2.9E-06 6.3E-11 77.7 5.3 59 13-75 660-718 (749)
99 KOG0521 Putative GTPase activa 98.1 3E-06 6.6E-11 82.3 3.7 78 13-94 655-732 (785)
100 KOG4369 RTK signaling protein 97.9 3.4E-06 7.3E-11 82.5 1.3 81 13-97 756-837 (2131)
101 KOG0506 Glutaminase (contains 97.9 7.3E-06 1.6E-10 73.6 2.3 62 6-70 532-593 (622)
102 KOG4369 RTK signaling protein 97.8 7.9E-06 1.7E-10 80.0 2.1 89 6-98 783-871 (2131)
103 KOG0818 GTPase-activating prot 97.8 4.1E-05 8.9E-10 69.2 5.8 56 12-70 165-220 (669)
104 KOG2384 Major histocompatibili 97.8 6.3E-05 1.4E-09 60.2 5.7 64 4-71 3-67 (223)
105 KOG0783 Uncharacterized conser 97.6 1.7E-05 3.6E-10 75.7 0.4 65 31-98 35-100 (1267)
106 KOG0520 Uncharacterized conser 97.5 5E-05 1.1E-09 74.2 2.1 82 13-98 573-655 (975)
107 KOG0705 GTPase-activating prot 97.4 0.00021 4.6E-09 65.8 5.4 74 18-94 628-704 (749)
108 KOG0511 Ankyrin repeat protein 97.4 0.00052 1.1E-08 60.4 6.7 68 16-87 38-105 (516)
109 smart00248 ANK ankyrin repeats 96.8 0.0025 5.3E-08 33.6 3.6 28 13-40 1-28 (30)
110 KOG2384 Major histocompatibili 96.5 0.0028 6.1E-08 50.9 3.7 54 42-98 6-60 (223)
111 KOG0782 Predicted diacylglycer 96.5 0.0046 9.9E-08 57.3 5.3 77 18-97 870-947 (1004)
112 KOG0520 Uncharacterized conser 96.5 0.00095 2.1E-08 65.5 1.0 85 9-98 604-694 (975)
113 KOG2505 Ankyrin repeat protein 95.6 0.008 1.7E-07 54.8 2.6 40 16-56 432-471 (591)
114 KOG2505 Ankyrin repeat protein 95.5 0.017 3.6E-07 52.8 4.3 64 27-93 404-472 (591)
115 smart00248 ANK ankyrin repeats 95.5 0.017 3.6E-07 30.1 2.7 27 47-76 1-27 (30)
116 KOG0521 Putative GTPase activa 95.1 0.027 5.8E-07 55.4 4.6 51 45-98 653-703 (785)
117 KOG3609 Receptor-activated Ca2 93.8 0.082 1.8E-06 51.4 4.4 52 17-70 28-82 (822)
118 KOG3609 Receptor-activated Ca2 92.8 0.11 2.3E-06 50.6 3.5 67 5-75 54-155 (822)
119 KOG0511 Ankyrin repeat protein 92.4 0.15 3.3E-06 45.4 3.7 52 5-60 61-113 (516)
120 COG4298 Uncharacterized protei 87.2 1.9 4.2E-05 29.9 5.0 50 157-219 15-64 (95)
121 PF11929 DUF3447: Domain of un 80.0 4.5 9.8E-05 27.5 4.6 48 15-72 7-54 (76)
122 PF03158 DUF249: Multigene fam 47.7 42 0.00091 27.2 4.7 44 18-70 147-190 (192)
123 KOG4591 Uncharacterized conser 46.8 11 0.00023 31.0 1.3 49 44-94 218-270 (280)
124 PF12304 BCLP: Beta-casein lik 41.3 61 0.0013 26.2 4.7 24 158-181 40-63 (188)
125 TIGR01569 A_tha_TIGR01569 plan 40.7 1.7E+02 0.0038 22.8 7.9 35 146-180 35-69 (154)
126 PF07344 Amastin: Amastin surf 40.3 1.7E+02 0.0038 22.7 7.6 22 154-175 61-82 (155)
127 PF01544 CorA: CorA-like Mg2+ 39.9 55 0.0012 27.7 4.8 21 196-216 236-256 (292)
128 PRK09546 zntB zinc transporter 39.1 93 0.002 27.3 6.2 21 196-216 266-286 (324)
129 PF06570 DUF1129: Protein of u 38.3 2.2E+02 0.0048 23.2 13.0 33 63-96 32-64 (206)
130 TIGR00383 corA magnesium Mg(2+ 34.1 1.3E+02 0.0029 26.0 6.4 21 196-216 260-280 (318)
131 PF11026 DUF2721: Protein of u 32.8 2.2E+02 0.0047 21.5 6.6 21 160-180 67-87 (130)
132 PF11241 DUF3043: Protein of u 30.1 1.5E+02 0.0032 23.8 5.2 19 192-210 76-94 (170)
133 PF06128 Shigella_OspC: Shigel 29.3 95 0.0021 26.2 4.1 21 15-35 180-200 (284)
134 KOG4591 Uncharacterized conser 26.5 48 0.0011 27.3 2.0 48 13-60 221-272 (280)
135 PF11286 DUF3087: Protein of u 22.7 4E+02 0.0086 21.2 8.0 48 187-234 11-62 (165)
136 PF11177 DUF2964: Protein of u 22.5 2.4E+02 0.0051 18.5 5.5 22 193-214 10-31 (62)
137 PF03669 UPF0139: Uncharacteri 21.7 2.6E+02 0.0056 20.3 4.9 16 160-175 34-49 (103)
138 MTH00213 ND6 NADH dehydrogenas 21.1 2.6E+02 0.0057 23.3 5.2 9 211-219 38-46 (239)
139 PRK11085 magnesium/nickel/coba 20.5 3E+02 0.0066 24.3 6.0 21 196-216 258-278 (316)
140 PF14126 DUF4293: Domain of un 20.4 4.1E+02 0.009 20.5 11.4 17 182-198 74-90 (149)
141 PF05297 Herpes_LMP1: Herpesvi 20.1 35 0.00075 29.7 0.0 9 241-249 70-78 (381)
No 1
>PF13962 PGG: Domain of unknown function
Probab=99.94 E-value=7.6e-27 Score=175.07 Aligned_cols=112 Identities=38% Similarity=0.599 Sum_probs=97.7
Q ss_pred hHHHHhhccchHHHHHHHHHHHHHhccCCCCCccCCCCCCCccccccCCc-hhhHHHhHhHHHHHHHHHHHHHHHHhhcc
Q 042220 104 EGEIKELKPRHTIVATLIATVTFAAGFTLPGGYWGKEGPIPGTSILIKNA-AFQAFVVSDVIAMVLSLSAVFIHFLTSTK 182 (255)
Q Consensus 104 ~~~~~~~~~~~~vvA~Liatvtf~a~l~~PGg~~~~~~~~~g~~~~~~~~-~f~~F~~~n~~a~~~S~~~~~~~~~~~~~ 182 (255)
+||+++.+++++++|+||||+||+++++||||++++++ +.|+|++.+++ .|++|+++|++||++|+.++++++.....
T Consensus 1 ~~~~~~~~~~llVvAtLIATvtF~A~~tpPGG~~~~~~-~~G~~il~~~~~~f~~F~~~nt~af~~S~~~i~~l~~~~~~ 79 (113)
T PF13962_consen 1 KKWLEDTRNSLLVVATLIATVTFQAAFTPPGGYWQDDD-DAGTPILAKKPSAFKAFLISNTIAFFSSLAAIFLLISGLDD 79 (113)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccc-CCCCchhccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 47999999999999999999999999999999999875 88999998777 99999999999999999999997732211
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 042220 183 TLRQIWFLFNVAHYSLMASMLAMVVAFVTGTYAM 216 (255)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~s~~~m~~af~~~~~~~ 216 (255)
..+..++.+.++..++++++.+|++||++|+|+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~a~~~~~~Af~~g~~~v 113 (113)
T PF13962_consen 80 FRRFLRRYLLIASVLMWIALISMMVAFAAGIYLV 113 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 1233456677899999999999999999999864
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.79 E-value=4.8e-20 Score=144.41 Aligned_cols=94 Identities=26% Similarity=0.251 Sum_probs=73.3
Q ss_pred CC-CcceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhcc
Q 042220 2 DK-SAACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQ 80 (255)
Q Consensus 2 d~-~~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~ 80 (255)
|| |+....|. +|+||||+||..|+.+++++|++...-..+.+|..||||||+|+..|+ .++++.|+.+.+.++|..
T Consensus 26 ~~kSL~~r~dq-D~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~--~evVk~Ll~r~~advna~ 102 (226)
T KOG4412|consen 26 DPKSLNARDDQ-DGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGN--DEVVKELLNRSGADVNAT 102 (226)
T ss_pred Chhhhhccccc-cCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCc--HHHHHHHhcCCCCCccee
Confidence 45 33334455 889999999999999999988864433346678889999999999998 888888885558889999
Q ss_pred CCCCCchhHHHHHhhhhc
Q 042220 81 DVNGNTPLHVLAAVLQKE 98 (255)
Q Consensus 81 d~~G~TpLh~A~~~~~~~ 98 (255)
++.|.|+||+|+.++..+
T Consensus 103 tn~G~T~LHyAagK~r~e 120 (226)
T KOG4412|consen 103 TNGGQTCLHYAAGKGRLE 120 (226)
T ss_pred cCCCcceehhhhcCChhh
Confidence 999999999988875544
No 3
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.76 E-value=4.7e-19 Score=138.88 Aligned_cols=108 Identities=25% Similarity=0.241 Sum_probs=94.1
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHh-CCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIIST-CPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNG 84 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~-~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G 84 (255)
++.+|. .||||||+||..|+.|+++.|+.+ ++|+ +..++.|+|+||+|+.+|+ .++.++|+ +.|+.++.+|+.|
T Consensus 65 ~ddkDd-aGWtPlhia~s~g~~evVk~Ll~r~~adv-na~tn~G~T~LHyAagK~r--~eIaqlLl-e~ga~i~~kD~~~ 139 (226)
T KOG4412|consen 65 PDDKDD-AGWTPLHIAASNGNDEVVKELLNRSGADV-NATTNGGQTCLHYAAGKGR--LEIAQLLL-EKGALIRIKDKQG 139 (226)
T ss_pred CCCccc-cCCchhhhhhhcCcHHHHHHHhcCCCCCc-ceecCCCcceehhhhcCCh--hhHHHHHH-hcCCCCccccccc
Confidence 456677 999999999999999999999999 8888 8899999999999999999 99999999 7899999999999
Q ss_pred CchhHHHHHhhhhc------cchhhhHHHHhhccchHHHH
Q 042220 85 NTPLHVLAAVLQKE------KTAVEEGEIKELKPRHTIVA 118 (255)
Q Consensus 85 ~TpLh~A~~~~~~~------~~~~~~~~~~~~~~~~~vvA 118 (255)
+||||-|+..|..+ ......+|.++.+++.++.|
T Consensus 140 qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~a 179 (226)
T KOG4412|consen 140 QTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHA 179 (226)
T ss_pred CchhHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHH
Confidence 99999999886655 22233467777788877777
No 4
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.67 E-value=5.1e-17 Score=126.68 Aligned_cols=88 Identities=25% Similarity=0.257 Sum_probs=84.4
Q ss_pred CCCcceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccC
Q 042220 2 DKSAACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQD 81 (255)
Q Consensus 2 d~~~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d 81 (255)
+++.+|.+|+ +|.||||.|+.+||.++++.|+..+++. +.+...||||||.||+..+ .+++..|+ +.|+++|++.
T Consensus 86 ~an~vNtrD~-D~YTpLHRAaYn~h~div~~ll~~gAn~-~a~T~~GWTPLhSAckWnN--~~va~~LL-qhgaDVnA~t 160 (228)
T KOG0512|consen 86 KANHVNTRDE-DEYTPLHRAAYNGHLDIVHELLLSGANK-EAKTNEGWTPLHSACKWNN--FEVAGRLL-QHGADVNAQT 160 (228)
T ss_pred cccccccccc-ccccHHHHHHhcCchHHHHHHHHccCCc-ccccccCccchhhhhcccc--hhHHHHHH-hccCcccccc
Confidence 5788999999 9999999999999999999999999998 8999999999999999999 99999999 8999999999
Q ss_pred CCCCchhHHHHHh
Q 042220 82 VNGNTPLHVLAAV 94 (255)
Q Consensus 82 ~~G~TpLh~A~~~ 94 (255)
+...||||+|+..
T Consensus 161 ~g~ltpLhlaa~~ 173 (228)
T KOG0512|consen 161 KGLLTPLHLAAGN 173 (228)
T ss_pred cccchhhHHhhcc
Confidence 9999999999987
No 5
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.65 E-value=1.1e-15 Score=139.62 Aligned_cols=139 Identities=19% Similarity=0.087 Sum_probs=81.8
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccc-cCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCC
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVD-ERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVN 83 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d-~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~ 83 (255)
.++..|+ +|.|+||+||.+++.+++++|+++++++ +..+ ..|.||||+|+++|+ ..++..|+ +.|++++.+|.+
T Consensus 70 ~v~~~D~-~g~tlLHWAAiNNrl~v~r~li~~gadv-n~~gG~l~stPLHWAar~G~--~~vv~lLl-qhGAdpt~~D~~ 144 (600)
T KOG0509|consen 70 SVNNPDR-EGVTLLHWAAINNRLDVARYLISHGADV-NAIGGVLGSTPLHWAARNGH--ISVVDLLL-QHGADPTLKDKQ 144 (600)
T ss_pred CCCCCCc-CCccceeHHHHcCcHHHHHHHHHcCCCc-cccCCCCCCCcchHHHHcCc--HHHHHHHH-HcCCCCceecCC
Confidence 3455566 6666666666666666666666666666 4444 446666666666666 66666666 566666666666
Q ss_pred CCchhHHHHHhhhhc---------------cchhhh------------------------HHH-HhhccchHHHHHHHHH
Q 042220 84 GNTPLHVLAAVLQKE---------------KTAVEE------------------------GEI-KELKPRHTIVATLIAT 123 (255)
Q Consensus 84 G~TpLh~A~~~~~~~---------------~~~~~~------------------------~~~-~~~~~~~~vvA~Liat 123 (255)
|.||+|+|++.+|.- |+.|++ .+. ++.+++.++.|++-..
T Consensus 145 G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN 224 (600)
T KOG0509|consen 145 GLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTDDNHGNTPLHWAVVGGN 224 (600)
T ss_pred CCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcccccccccccCCchHHHHHhcCC
Confidence 666666666654432 333322 112 2456777888877776
Q ss_pred HHHHhccCCCCCccCCC-CCCCccccc
Q 042220 124 VTFAAGFTLPGGYWGKE-GPIPGTSIL 149 (255)
Q Consensus 124 vtf~a~l~~PGg~~~~~-~~~~g~~~~ 149 (255)
.+-.. +-.-||...+. +.++.+|..
T Consensus 225 ~~~v~-Ll~~g~~~~d~~~~~g~tp~~ 250 (600)
T KOG0509|consen 225 LTAVK-LLLEGGADLDKTNTNGKTPFD 250 (600)
T ss_pred cceEe-hhhhcCCcccccccCCCCHHH
Confidence 66666 66666664433 333345544
No 6
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.61 E-value=1.1e-15 Score=122.27 Aligned_cols=85 Identities=14% Similarity=0.150 Sum_probs=49.0
Q ss_pred ceeecCCCCCcHHHHHHHcChHHH---HHHHHHhCCCcccccc-cCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRV---VNEIISTCPDCCKQVD-ERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQD 81 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~---v~~Ll~~~~~~~~~~d-~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d 81 (255)
++.+|+ +|+||||+|+.+|+.+. +++|++.++++ +.+| ..|+||||+|+..++ .+++++|+++.+++++.+|
T Consensus 50 ~~~~d~-~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadi-n~~d~~~g~TpLh~A~~~g~--~~iv~~Ll~~~gad~~~~d 125 (166)
T PHA02743 50 LHRYDH-HGRQCTHMVAWYDRANAVMKIELLVNMGADI-NARELGTGNTLLHIAASTKN--YELAEWLCRQLGVNLGAIN 125 (166)
T ss_pred hhccCC-CCCcHHHHHHHhCccCHHHHHHHHHHcCCCC-CCCCCCCCCcHHHHHHHhCC--HHHHHHHHhccCCCccCcC
Confidence 344555 56666666666555432 55666666555 4555 356666666666666 6666665533456666666
Q ss_pred CCCCchhHHHHHh
Q 042220 82 VNGNTPLHVLAAV 94 (255)
Q Consensus 82 ~~G~TpLh~A~~~ 94 (255)
.+|+||||+|+..
T Consensus 126 ~~g~tpL~~A~~~ 138 (166)
T PHA02743 126 YQHETAYHIAYKM 138 (166)
T ss_pred CCCCCHHHHHHHc
Confidence 6666666666655
No 7
>PHA02741 hypothetical protein; Provisional
Probab=99.59 E-value=3e-15 Score=120.10 Aligned_cols=88 Identities=13% Similarity=0.163 Sum_probs=78.2
Q ss_pred cceeecCCCCCcHHHHHHHcCh----HHHHHHHHHhCCCccccccc-CCchHHHHHHHhCCchHHHHHHHhhhhhhhhhc
Q 042220 5 AACISDNDQKMTALLLAAGRGH----IRVVNEIISTCPDCCKQVDE-RGWNLLHFAMASSNLFQLHSRLRNRSVEMLINK 79 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~----~~~v~~Ll~~~~~~~~~~d~-~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~ 79 (255)
.++.+|. +|+||||+|+..|+ .++++.|++.++++ +.+|. +|+||||+|+..++ .+++++|+...+++++.
T Consensus 52 ~in~~d~-~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadi-n~~~~~~g~TpLh~A~~~~~--~~iv~~Ll~~~g~~~~~ 127 (169)
T PHA02741 52 ALNATDD-AGQMCIHIAAEKHEAQLAAEIIDHLIELGADI-NAQEMLEGDTALHLAAHRRD--HDLAEWLCCQPGIDLHF 127 (169)
T ss_pred hhhccCC-CCCcHHHHHHHcCChHHHHHHHHHHHHcCCCC-CCCCcCCCCCHHHHHHHcCC--HHHHHHHHhCCCCCCCc
Confidence 4677888 99999999999998 58899999999998 77775 89999999999999 99999998446899999
Q ss_pred cCCCCCchhHHHHHhhh
Q 042220 80 QDVNGNTPLHVLAAVLQ 96 (255)
Q Consensus 80 ~d~~G~TpLh~A~~~~~ 96 (255)
+|.+|.||||+|...++
T Consensus 128 ~n~~g~tpL~~A~~~~~ 144 (169)
T PHA02741 128 CNADNKSPFELAIDNED 144 (169)
T ss_pred CCCCCCCHHHHHHHCCC
Confidence 99999999999998843
No 8
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.57 E-value=3.3e-15 Score=139.47 Aligned_cols=131 Identities=19% Similarity=0.134 Sum_probs=107.8
Q ss_pred CcceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhh-hhhhhccCC
Q 042220 4 SAACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSV-EMLINKQDV 82 (255)
Q Consensus 4 ~~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~-~~~i~~~d~ 82 (255)
..+|..|+ +|.||||+||+.|+++.++.|+..|+++ +.+++++.||||.|+.+|+ ..+++-|+++. ....|..|.
T Consensus 264 elv~~~d~-dg~tpLH~a~r~G~~~svd~Ll~~Ga~I-~~kn~d~~spLH~AA~yg~--~ntv~rLL~~~~~rllne~D~ 339 (929)
T KOG0510|consen 264 ELVNDEDN-DGCTPLHYAARQGGPESVDNLLGFGASI-NSKNKDEESPLHFAAIYGR--INTVERLLQESDTRLLNESDL 339 (929)
T ss_pred HHhhcccc-cCCchHHHHHHcCChhHHHHHHHcCCcc-cccCCCCCCchHHHHHccc--HHHHHHHHhCcCccccccccc
Confidence 35788899 9999999999999999999999999998 8999999999999999999 99999999633 367899999
Q ss_pred CCCchhHHHHHhhhhc-----cchhhh-H---HHHhhccchHHHHHHHHHHHHHhccCCCCCccC
Q 042220 83 NGNTPLHVLAAVLQKE-----KTAVEE-G---EIKELKPRHTIVATLIATVTFAAGFTLPGGYWG 138 (255)
Q Consensus 83 ~G~TpLh~A~~~~~~~-----~~~~~~-~---~~~~~~~~~~vvA~Liatvtf~a~l~~PGg~~~ 138 (255)
.|.||||+|+++||.+ -++|.. . .....+++.++.|++-.......-|--.|.+.+
T Consensus 340 ~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~ 404 (929)
T KOG0510|consen 340 HGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADIG 404 (929)
T ss_pred cCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcCCcee
Confidence 9999999999998876 111111 1 225567888888887777777776666777763
No 9
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.57 E-value=1.2e-15 Score=120.31 Aligned_cols=86 Identities=10% Similarity=0.028 Sum_probs=57.9
Q ss_pred eeecCCCCCcHHHHHHHcChH---HHHHHHHHhCCCcccccc-cCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCC
Q 042220 7 CISDNDQKMTALLLAAGRGHI---RVVNEIISTCPDCCKQVD-ERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDV 82 (255)
Q Consensus 7 ~~~d~~~G~tpLh~Aa~~g~~---~~v~~Ll~~~~~~~~~~d-~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~ 82 (255)
+.+|+ +|+||||+|+..|+. ++++.|++.++++ +.+| .+|+||||+|+..++ .+++++|+.+.+.+++.+|.
T Consensus 49 ~~~d~-~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadi-n~~~~~~g~T~Lh~A~~~~~--~~i~~~Ll~~~g~d~n~~~~ 124 (154)
T PHA02736 49 LEYNR-HGKQCVHIVSNPDKADPQEKLKLLMEWGADI-NGKERVFGNTPLHIAVYTQN--YELATWLCNQPGVNMEILNY 124 (154)
T ss_pred HHhcC-CCCEEEEeecccCchhHHHHHHHHHHcCCCc-cccCCCCCCcHHHHHHHhCC--HHHHHHHHhCCCCCCccccC
Confidence 34455 667777777766654 3566677777776 5565 467777777777777 77777776334677777777
Q ss_pred CCCchhHHHHHhhh
Q 042220 83 NGNTPLHVLAAVLQ 96 (255)
Q Consensus 83 ~G~TpLh~A~~~~~ 96 (255)
.|.||||+|+..++
T Consensus 125 ~g~tpL~~A~~~~~ 138 (154)
T PHA02736 125 AFKTPYYVACERHD 138 (154)
T ss_pred CCCCHHHHHHHcCC
Confidence 77777777776533
No 10
>PHA02791 ankyrin-like protein; Provisional
Probab=99.56 E-value=8.3e-15 Score=126.70 Aligned_cols=85 Identities=18% Similarity=0.081 Sum_probs=68.0
Q ss_pred eeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCc
Q 042220 7 CISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNT 86 (255)
Q Consensus 7 ~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~T 86 (255)
+.+|. +|+||||+|++.|+.++++.|++.+++. +.+ +|+||||+|+..|+ .++++.|+ +.|++++.+|.+|+|
T Consensus 24 ~~~D~-~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~-n~~--d~~TpLh~Aa~~g~--~eiV~lLL-~~Gadvn~~d~~G~T 96 (284)
T PHA02791 24 FKADV-HGHSALYYAIADNNVRLVCTLLNAGALK-NLL--ENEFPLHQAATLED--TKIVKILL-FSGMDDSQFDDKGNT 96 (284)
T ss_pred CCCCC-CCCcHHHHHHHcCCHHHHHHHHHCcCCC-cCC--CCCCHHHHHHHCCC--HHHHHHHH-HCCCCCCCCCCCCCC
Confidence 45677 8888888888888888888888888766 433 36788888888888 88888887 678888888888888
Q ss_pred hhHHHHHhhhhc
Q 042220 87 PLHVLAAVLQKE 98 (255)
Q Consensus 87 pLh~A~~~~~~~ 98 (255)
|||+|+..++.+
T Consensus 97 pLh~Aa~~g~~e 108 (284)
T PHA02791 97 ALYYAVDSGNMQ 108 (284)
T ss_pred HHHHHHHcCCHH
Confidence 888888876654
No 11
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.56 E-value=7.4e-15 Score=136.12 Aligned_cols=137 Identities=18% Similarity=0.104 Sum_probs=99.9
Q ss_pred ceeecCCC-CCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCC
Q 042220 6 ACISDNDQ-KMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNG 84 (255)
Q Consensus 6 v~~~d~~~-G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G 84 (255)
++.+|. + |+||||+|+.+|+.++++.|+++++++ +.+|..|+||||.|+..++ .++++.|+ +.|++++.+|.+|
T Consensus 160 in~~~~-~~g~tpLh~A~~~~~~~iv~~Ll~~gad~-n~~d~~g~tpLh~A~~~~~--~~iv~~Ll-~~ga~in~~d~~g 234 (477)
T PHA02878 160 INMKDR-HKGNTALHYATENKDQRLTELLLSYGANV-NIPDKTNNSPLHHAVKHYN--KPIVHILL-ENGASTDARDKCG 234 (477)
T ss_pred CCccCC-CCCCCHHHHHHhCCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhCC--HHHHHHHH-HcCCCCCCCCCCC
Confidence 566777 6 999999999999999999999999998 8899999999999999999 99999999 7899999999999
Q ss_pred CchhHHHHHh-hhhc------cchhhhHHHH-hhccchHHHHHHHHHHHHHhccCCCCCccCCCCCCCccccc
Q 042220 85 NTPLHVLAAV-LQKE------KTAVEEGEIK-ELKPRHTIVATLIATVTFAAGFTLPGGYWGKEGPIPGTSIL 149 (255)
Q Consensus 85 ~TpLh~A~~~-~~~~------~~~~~~~~~~-~~~~~~~vvA~Liatvtf~a~l~~PGg~~~~~~~~~g~~~~ 149 (255)
+||||+|+.. ++.+ +......... ..+.++++.| ........-+...|...+..+.++-+|+.
T Consensus 235 ~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~ 305 (477)
T PHA02878 235 NTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPLS 305 (477)
T ss_pred CCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 9999999975 2322 1100000001 1244555554 22222233333467666555555667765
No 12
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.56 E-value=1e-14 Score=133.67 Aligned_cols=88 Identities=23% Similarity=0.233 Sum_probs=79.9
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
++.+|+ .|.||||+|+..|+.++++.|+++++++ +.+|.+|+||||+|+..++ .+++++|+ +.|.+++.+|.+|+
T Consensus 117 ~n~~~~-~g~T~Lh~A~~~~~~~~v~~Ll~~gad~-n~~d~~g~tpLh~A~~~~~--~~iv~~Ll-~~g~~~n~~~~~g~ 191 (434)
T PHA02874 117 VNIKDA-ELKTFLHYAIKKGDLESIKMLFEYGADV-NIEDDNGCYPIHIAIKHNF--FDIIKLLL-EKGAYANVKDNNGE 191 (434)
T ss_pred CCCCCC-CCccHHHHHHHCCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHCCc--HHHHHHHH-HCCCCCCCCCCCCC
Confidence 456778 8999999999999999999999999998 7889999999999999999 99999998 78899999999999
Q ss_pred chhHHHHHhhhhc
Q 042220 86 TPLHVLAAVLQKE 98 (255)
Q Consensus 86 TpLh~A~~~~~~~ 98 (255)
||||+|++.++.+
T Consensus 192 tpL~~A~~~g~~~ 204 (434)
T PHA02874 192 SPLHNAAEYGDYA 204 (434)
T ss_pred CHHHHHHHcCCHH
Confidence 9999999987654
No 13
>PHA02741 hypothetical protein; Provisional
Probab=99.55 E-value=5.4e-15 Score=118.61 Aligned_cols=89 Identities=17% Similarity=0.166 Sum_probs=75.8
Q ss_pred CcceeecCCCCCcHHHHHHHcChHHHHHHHHHh------CCCcccccccCCchHHHHHHHhCCchH----HHHHHHhhhh
Q 042220 4 SAACISDNDQKMTALLLAAGRGHIRVVNEIIST------CPDCCKQVDERGWNLLHFAMASSNLFQ----LHSRLRNRSV 73 (255)
Q Consensus 4 ~~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~------~~~~~~~~d~~G~t~Lh~A~~~g~~~~----~~~~~Ll~~~ 73 (255)
..++.+|+ +|+||||+|++.|+.++++.|+.. ++++ +.+|..|+||||+|+..++ . +++++|+ +.
T Consensus 12 ~~~~~~~~-~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~i-n~~d~~g~T~Lh~A~~~g~--~~~~~~ii~~Ll-~~ 86 (169)
T PHA02741 12 EMIAEKNS-EGENFFHEAARCGCFDIIARFTPFIRGDCHAAAL-NATDDAGQMCIHIAAEKHE--AQLAAEIIDHLI-EL 86 (169)
T ss_pred HHhhcccc-CCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhh-hccCCCCCcHHHHHHHcCC--hHHHHHHHHHHH-Hc
Confidence 34667888 999999999999999999998643 3455 7889999999999999998 5 6778888 78
Q ss_pred hhhhhccCC-CCCchhHHHHHhhhh
Q 042220 74 EMLINKQDV-NGNTPLHVLAAVLQK 97 (255)
Q Consensus 74 ~~~i~~~d~-~G~TpLh~A~~~~~~ 97 (255)
|+++|.+|. +|+||||+|++.++.
T Consensus 87 gadin~~~~~~g~TpLh~A~~~~~~ 111 (169)
T PHA02741 87 GADINAQEMLEGDTALHLAAHRRDH 111 (169)
T ss_pred CCCCCCCCcCCCCCHHHHHHHcCCH
Confidence 999999985 999999999998443
No 14
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.55 E-value=8.3e-15 Score=133.95 Aligned_cols=89 Identities=27% Similarity=0.188 Sum_probs=79.2
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCC
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNG 84 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G 84 (255)
.+|+.+..-|.||||+|+++|+..+++.|+++|+|+ +.+|.+|.||+|+|++.++ ...+.+++ ..++++|.+|.+|
T Consensus 103 dvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdp-t~~D~~G~~~lHla~~~~~--~~~vayll-~~~~d~d~~D~~g 178 (600)
T KOG0509|consen 103 DVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADP-TLKDKQGLTPLHLAAQFGH--TALVAYLL-SKGADIDLRDNNG 178 (600)
T ss_pred CccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCC-ceecCCCCcHHHHHHHhCc--hHHHHHHH-HhcccCCCcCCCC
Confidence 456666436889999999999999999999999999 8999999999999999999 99999988 6789999999999
Q ss_pred CchhHHHHHhhhh
Q 042220 85 NTPLHVLAAVLQK 97 (255)
Q Consensus 85 ~TpLh~A~~~~~~ 97 (255)
.||||+|+.++..
T Consensus 179 rTpLmwAaykg~~ 191 (600)
T KOG0509|consen 179 RTPLMWAAYKGFA 191 (600)
T ss_pred CCHHHHHHHhccc
Confidence 9999999988543
No 15
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.53 E-value=8.1e-14 Score=115.59 Aligned_cols=84 Identities=12% Similarity=0.162 Sum_probs=73.6
Q ss_pred ceeecCCCCCcHHHHHHHcC--hHHHHHHHHHhCCCcccccc-cCCchHHHHHHHh---CCchHHHHHHHhhhhhhhhhc
Q 042220 6 ACISDNDQKMTALLLAAGRG--HIRVVNEIISTCPDCCKQVD-ERGWNLLHFAMAS---SNLFQLHSRLRNRSVEMLINK 79 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g--~~~~v~~Ll~~~~~~~~~~d-~~G~t~Lh~A~~~---g~~~~~~~~~Ll~~~~~~i~~ 79 (255)
++.+|+ .|.||||+|+.++ +.++++.|+++++++ +.+| .+|+||||+|+.. ++ .+++++|+ +.|+++|.
T Consensus 44 ~n~~~~-~g~TpLh~a~~~~~~~~eiv~~Ll~~gadv-n~~~~~~g~TpLh~a~~~~~~~~--~eiv~~Ll-~~gadin~ 118 (209)
T PHA02859 44 VNDCND-LYETPIFSCLEKDKVNVEILKFLIENGADV-NFKTRDNNLSALHHYLSFNKNVE--PEILKILI-DSGSSITE 118 (209)
T ss_pred hhccCc-cCCCHHHHHHHcCCCCHHHHHHHHHCCCCC-CccCCCCCCCHHHHHHHhCcccc--HHHHHHHH-HCCCCCCC
Confidence 466788 9999999999854 899999999999998 6676 5899999998864 36 89999998 78999999
Q ss_pred cCCCCCchhHHHHHh
Q 042220 80 QDVNGNTPLHVLAAV 94 (255)
Q Consensus 80 ~d~~G~TpLh~A~~~ 94 (255)
+|.+|.||||+|+..
T Consensus 119 ~d~~G~TpLh~a~~~ 133 (209)
T PHA02859 119 EDEDGKNLLHMYMCN 133 (209)
T ss_pred cCCCCCCHHHHHHHh
Confidence 999999999998764
No 16
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.53 E-value=1.7e-14 Score=131.27 Aligned_cols=82 Identities=16% Similarity=0.107 Sum_probs=45.6
Q ss_pred CCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHH
Q 042220 13 QKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLA 92 (255)
Q Consensus 13 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~ 92 (255)
+++||||.|++.|+.++++.|++.+++..+..+.+|+||||+|+..|+ .+++++|+ +.|++++.+|.+|.||||+|+
T Consensus 67 ~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~--~~iv~~Ll-~~gad~~~~~~~g~tpLh~A~ 143 (413)
T PHA02875 67 DIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKK--LDIMKLLI-ARGADPDIPNTDKFSPLHLAV 143 (413)
T ss_pred CcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCC--HHHHHHHH-hCCCCCCCCCCCCCCHHHHHH
Confidence 334444444444444444444444433323334556666666666666 66666666 556666666666666666666
Q ss_pred Hhhhh
Q 042220 93 AVLQK 97 (255)
Q Consensus 93 ~~~~~ 97 (255)
+.++.
T Consensus 144 ~~~~~ 148 (413)
T PHA02875 144 MMGDI 148 (413)
T ss_pred HcCCH
Confidence 65444
No 17
>PHA02791 ankyrin-like protein; Provisional
Probab=99.53 E-value=1.9e-14 Score=124.43 Aligned_cols=130 Identities=12% Similarity=-0.015 Sum_probs=104.4
Q ss_pred CCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCC-CchhHHH
Q 042220 13 QKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNG-NTPLHVL 91 (255)
Q Consensus 13 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G-~TpLh~A 91 (255)
+|+||||+|+..|+.++++.|++.++++ +.+|.+|+||||+|+..|+ .+++++|+ +.|++++.+|+.| .||||+|
T Consensus 60 d~~TpLh~Aa~~g~~eiV~lLL~~Gadv-n~~d~~G~TpLh~Aa~~g~--~eivk~Ll-~~gadin~~~~~g~~TpL~~A 135 (284)
T PHA02791 60 ENEFPLHQAATLEDTKIVKILLFSGMDD-SQFDDKGNTALYYAVDSGN--MQTVKLFV-KKNWRLMFYGKTGWKTSFYHA 135 (284)
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCC--HHHHHHHH-HCCCCcCccCCCCCcHHHHHH
Confidence 6789999999999999999999999998 8899999999999999999 99999999 7899999999988 5999999
Q ss_pred HHhhhhc------cchhhhHHHHhhccchHHHHHHHHHHHHHhccCCCCCccCCCCCCCccc
Q 042220 92 AAVLQKE------KTAVEEGEIKELKPRHTIVATLIATVTFAAGFTLPGGYWGKEGPIPGTS 147 (255)
Q Consensus 92 ~~~~~~~------~~~~~~~~~~~~~~~~~vvA~Liatvtf~a~l~~PGg~~~~~~~~~g~~ 147 (255)
+..++.+ +..... .-...++++++.|+.-.....+..|-..|+..+..+..+++|
T Consensus 136 a~~g~~eivk~LL~~~~~~-~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~ 196 (284)
T PHA02791 136 VMLNDVSIVSYFLSEIPST-FDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIP 196 (284)
T ss_pred HHcCCHHHHHHHHhcCCcc-cccccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCh
Confidence 9997765 211110 000125788888888877777777777787766555555555
No 18
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.53 E-value=6e-13 Score=124.61 Aligned_cols=89 Identities=24% Similarity=0.264 Sum_probs=74.2
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHH-hCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhh---cc
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIIS-TCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLIN---KQ 80 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~-~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~---~~ 80 (255)
.++.+++ ++.||||.||++|+.+.++.|++ .+-...+..|..|+||||+|++.|| ..+++.|+ +.|++.+ ..
T Consensus 298 ~I~~kn~-d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH--~~v~qlLl-~~GA~~~~~~e~ 373 (929)
T KOG0510|consen 298 SINSKNK-DEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGH--DRVVQLLL-NKGALFLNMSEA 373 (929)
T ss_pred cccccCC-CCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCH--HHHHHHHH-hcChhhhccccc
Confidence 3567788 89999999999999999999998 5555557788889999999999999 99999988 6787766 56
Q ss_pred CCCCCchhHHHHHhhhh
Q 042220 81 DVNGNTPLHVLAAVLQK 97 (255)
Q Consensus 81 d~~G~TpLh~A~~~~~~ 97 (255)
|.+|+||||.|++.|+.
T Consensus 374 D~dg~TaLH~Aa~~g~~ 390 (929)
T KOG0510|consen 374 DSDGNTALHLAAKYGNT 390 (929)
T ss_pred ccCCchhhhHHHHhccH
Confidence 99999999999987553
No 19
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.51 E-value=3.8e-14 Score=128.93 Aligned_cols=87 Identities=20% Similarity=0.167 Sum_probs=79.1
Q ss_pred eeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCc
Q 042220 7 CISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNT 86 (255)
Q Consensus 7 ~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~T 86 (255)
+..++ +|+||||+|+..|+.++++.|+++++++ +.+|..|+||||+|+..|+ .++++.|+ +.|.+++.+|..|+|
T Consensus 96 ~~~~~-~g~tpL~~A~~~~~~~iv~~Ll~~gad~-~~~~~~g~tpLh~A~~~~~--~~~v~~Ll-~~g~~~~~~d~~g~T 170 (413)
T PHA02875 96 DVFYK-DGMTPLHLATILKKLDIMKLLIARGADP-DIPNTDKFSPLHLAVMMGD--IKGIELLI-DHKACLDIEDCCGCT 170 (413)
T ss_pred ccccC-CCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHcCC--HHHHHHHH-hcCCCCCCCCCCCCC
Confidence 34566 8999999999999999999999999998 7889999999999999999 99999999 789999999999999
Q ss_pred hhHHHHHhhhhc
Q 042220 87 PLHVLAAVLQKE 98 (255)
Q Consensus 87 pLh~A~~~~~~~ 98 (255)
|||+|+..++.+
T Consensus 171 pL~~A~~~g~~e 182 (413)
T PHA02875 171 PLIIAMAKGDIA 182 (413)
T ss_pred HHHHHHHcCCHH
Confidence 999999987654
No 20
>PHA02946 ankyin-like protein; Provisional
Probab=99.51 E-value=3.8e-14 Score=130.23 Aligned_cols=84 Identities=18% Similarity=0.163 Sum_probs=69.5
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhc-cCCC
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINK-QDVN 83 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~-~d~~ 83 (255)
.++.+|. +|+||||+|++.|+.++++.|+++++++ +.+|.+|+||||+|+..++...+++++|+ +.|+++|. +|.+
T Consensus 64 dvn~~d~-~G~TpLh~Aa~~g~~eiv~lLL~~GAdi-n~~d~~g~TpLh~A~~~~~~~~e~v~lLl-~~Gadin~~~d~~ 140 (446)
T PHA02946 64 SPNETDD-DGNYPLHIASKINNNRIVAMLLTHGADP-NACDKQHKTPLYYLSGTDDEVIERINLLV-QYGAKINNSVDEE 140 (446)
T ss_pred CCCccCC-CCCCHHHHHHHcCCHHHHHHHHHCcCCC-CCCCCCCCCHHHHHHHcCCchHHHHHHHH-HcCCCcccccCCC
Confidence 3577888 9999999999999999999999999998 78999999999999876531157788887 67888874 5777
Q ss_pred CCchhHHH
Q 042220 84 GNTPLHVL 91 (255)
Q Consensus 84 G~TpLh~A 91 (255)
|.||||.|
T Consensus 141 g~tpL~aa 148 (446)
T PHA02946 141 GCGPLLAC 148 (446)
T ss_pred CCcHHHHH
Confidence 88888744
No 21
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.50 E-value=3.2e-14 Score=119.32 Aligned_cols=89 Identities=22% Similarity=0.244 Sum_probs=81.4
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCC
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNG 84 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G 84 (255)
..|+.|. .|.+|||+||+.||..+++.|+.+++.+ +..+.-..||||+|+.+|| .++++.|+ +..+++|+.|.+|
T Consensus 26 dln~gdd-hgfsplhwaakegh~aivemll~rgarv-n~tnmgddtplhlaaahgh--rdivqkll-~~kadvnavnehg 100 (448)
T KOG0195|consen 26 DLNVGDD-HGFSPLHWAAKEGHVAIVEMLLSRGARV-NSTNMGDDTPLHLAAAHGH--RDIVQKLL-SRKADVNAVNEHG 100 (448)
T ss_pred ccccccc-cCcchhhhhhhcccHHHHHHHHhccccc-ccccCCCCcchhhhhhccc--HHHHHHHH-HHhcccchhhccC
Confidence 3577788 9999999999999999999999999998 7777778899999999999 99999999 7889999999999
Q ss_pred CchhHHHHHhhhhc
Q 042220 85 NTPLHVLAAVLQKE 98 (255)
Q Consensus 85 ~TpLh~A~~~~~~~ 98 (255)
+||||||+-.|+.+
T Consensus 101 ntplhyacfwgydq 114 (448)
T KOG0195|consen 101 NTPLHYACFWGYDQ 114 (448)
T ss_pred CCchhhhhhhcHHH
Confidence 99999999887654
No 22
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.50 E-value=7.9e-14 Score=121.01 Aligned_cols=84 Identities=14% Similarity=0.073 Sum_probs=41.8
Q ss_pred ecCCCCCc-HHHHHHHcChHHHHHHHHHhCCCccccc----ccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccC-C
Q 042220 9 SDNDQKMT-ALLLAAGRGHIRVVNEIISTCPDCCKQV----DERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQD-V 82 (255)
Q Consensus 9 ~d~~~G~t-pLh~Aa~~g~~~~v~~Ll~~~~~~~~~~----d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d-~ 82 (255)
+|+ +|+| +||.|++.|+.++++.|+++|+++ +.+ |..|.||||+|+..++ .+++++|+ +.|+++|.++ .
T Consensus 28 ~d~-~~~~~lL~~A~~~~~~eivk~LL~~GAdi-N~~~~~sd~~g~TpLh~Aa~~~~--~eivklLL-~~GADVN~~~~~ 102 (300)
T PHA02884 28 KNK-ICIANILYSSIKFHYTDIIDAILKLGADP-EAPFPLSENSKTNPLIYAIDCDN--DDAAKLLI-RYGADVNRYAEE 102 (300)
T ss_pred cCc-CCCCHHHHHHHHcCCHHHHHHHHHCCCCc-cccCcccCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCcCcccCC
Confidence 444 4443 233334445555555555555554 333 2345555555555555 55555555 4555555542 3
Q ss_pred CCCchhHHHHHhhhh
Q 042220 83 NGNTPLHVLAAVLQK 97 (255)
Q Consensus 83 ~G~TpLh~A~~~~~~ 97 (255)
.|.||||+|+..++.
T Consensus 103 ~g~TpLh~Aa~~~~~ 117 (300)
T PHA02884 103 AKITPLYISVLHGCL 117 (300)
T ss_pred CCCCHHHHHHHcCCH
Confidence 455555555554443
No 23
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.49 E-value=1.3e-13 Score=98.49 Aligned_cols=72 Identities=31% Similarity=0.335 Sum_probs=64.7
Q ss_pred HHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHHHhhhh
Q 042220 18 LLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLAAVLQK 97 (255)
Q Consensus 18 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~~~~~~ 97 (255)
||+|++.|+.++++.|++.+++. +. |+||||+|+.+|+ .+++++|+ +.|.+++.+|.+|+||||+|+.+++.
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~-~~----~~~~l~~A~~~~~--~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~ 72 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADI-NL----GNTALHYAAENGN--LEIVKLLL-ENGADINSQDKNGNTALHYAAENGNL 72 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTT-TS----SSBHHHHHHHTTT--HHHHHHHH-HTTTCTT-BSTTSSBHHHHHHHTTHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCC-CC----CCCHHHHHHHcCC--HHHHHHHH-HhcccccccCCCCCCHHHHHHHcCCH
Confidence 79999999999999999988776 32 9999999999999 99999999 78999999999999999999998554
No 24
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.49 E-value=5.2e-14 Score=112.60 Aligned_cols=88 Identities=23% Similarity=0.195 Sum_probs=73.4
Q ss_pred ceeecCCCCCcHHHHHHHcChH----HHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHH---HHHHhhhhhhhhh
Q 042220 6 ACISDNDQKMTALLLAAGRGHI----RVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLH---SRLRNRSVEMLIN 78 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~----~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~---~~~Ll~~~~~~i~ 78 (255)
++..|+ ++.+++|.|++.|+. ++++.|.+.+++. +.+|.+|+||||+|+.+|+ .+. +++|+ +.|+++|
T Consensus 13 ~~~~~~-~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~-~~~d~~g~t~Lh~Aa~~g~--~~~~~~i~~Ll-~~Gadin 87 (166)
T PHA02743 13 AVEIDE-DEQNTFLRICRTGNIYELMEVAPFISGDGHLL-HRYDHHGRQCTHMVAWYDR--ANAVMKIELLV-NMGADIN 87 (166)
T ss_pred Hhhhcc-CCCcHHHHHHHcCCHHHHHHHHHHHhhcchhh-hccCCCCCcHHHHHHHhCc--cCHHHHHHHHH-HcCCCCC
Confidence 345667 788999999999998 5566677777776 7889999999999999988 554 78888 7899999
Q ss_pred ccC-CCCCchhHHHHHhhhhc
Q 042220 79 KQD-VNGNTPLHVLAAVLQKE 98 (255)
Q Consensus 79 ~~d-~~G~TpLh~A~~~~~~~ 98 (255)
.+| ..|+||||+|+..++.+
T Consensus 88 ~~d~~~g~TpLh~A~~~g~~~ 108 (166)
T PHA02743 88 ARELGTGNTLLHIAASTKNYE 108 (166)
T ss_pred CCCCCCCCcHHHHHHHhCCHH
Confidence 998 58999999999986643
No 25
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.49 E-value=2.1e-13 Score=124.97 Aligned_cols=86 Identities=19% Similarity=0.155 Sum_probs=79.9
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
++.+|+ +|.||||+|++.|+.++++.|++++++. +.+|..|+||||+|+..|+ .+++++|+ +.|.+++.+|.+|.
T Consensus 150 ~n~~d~-~g~tpLh~A~~~~~~~iv~~Ll~~g~~~-n~~~~~g~tpL~~A~~~g~--~~iv~~Ll-~~g~~i~~~~~~g~ 224 (434)
T PHA02874 150 VNIEDD-NGCYPIHIAIKHNFFDIIKLLLEKGAYA-NVKDNNGESPLHNAAEYGD--YACIKLLI-DHGNHIMNKCKNGF 224 (434)
T ss_pred CCCcCC-CCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCC--HHHHHHHH-hCCCCCcCCCCCCC
Confidence 466788 9999999999999999999999999988 7889999999999999999 99999999 78999999999999
Q ss_pred chhHHHHHhhh
Q 042220 86 TPLHVLAAVLQ 96 (255)
Q Consensus 86 TpLh~A~~~~~ 96 (255)
||||.|+..++
T Consensus 225 TpL~~A~~~~~ 235 (434)
T PHA02874 225 TPLHNAIIHNR 235 (434)
T ss_pred CHHHHHHHCCh
Confidence 99999998643
No 26
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.47 E-value=9.6e-14 Score=128.47 Aligned_cols=87 Identities=24% Similarity=0.298 Sum_probs=74.3
Q ss_pred eeecCCCCCcHHHHHH--HcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhC--CchHHHHHHHhhhhhhhhhccCC
Q 042220 7 CISDNDQKMTALLLAA--GRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASS--NLFQLHSRLRNRSVEMLINKQDV 82 (255)
Q Consensus 7 ~~~d~~~G~tpLh~Aa--~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g--~~~~~~~~~Ll~~~~~~i~~~d~ 82 (255)
+.+|. .|.||||+|+ ..|+.++++.|++++++. +.+|..|+||||+|+..+ + .+++++|+ +.|++++.+|.
T Consensus 100 ~~~d~-~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~--~~iv~~Ll-~~g~din~~d~ 174 (480)
T PHA03100 100 NAPDN-NGITPLLYAISKKSNSYSIVEYLLDNGANV-NIKNSDGENLLHLYLESNKID--LKILKLLI-DKGVDINAKNR 174 (480)
T ss_pred CCCCC-CCCchhhHHHhcccChHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHcCCCh--HHHHHHHH-HCCCCcccccC
Confidence 66777 8899999999 889999999999888887 778888999999999888 8 88888888 77888888888
Q ss_pred CCCchhHHHHHhhhhc
Q 042220 83 NGNTPLHVLAAVLQKE 98 (255)
Q Consensus 83 ~G~TpLh~A~~~~~~~ 98 (255)
+|+||||+|++.++.+
T Consensus 175 ~g~tpL~~A~~~~~~~ 190 (480)
T PHA03100 175 YGYTPLHIAVEKGNID 190 (480)
T ss_pred CCCCHHHHHHHhCCHH
Confidence 8999999998886544
No 27
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.46 E-value=1.3e-13 Score=118.70 Aligned_cols=128 Identities=20% Similarity=0.148 Sum_probs=96.7
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcc-------------------------------------ccc-cc
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCC-------------------------------------KQV-DE 46 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~-------------------------------------~~~-d~ 46 (255)
.+|..|. +|+|+|||++.+++.++|+.|+..+-.-. |.+ ..
T Consensus 260 vVNlaDs-NGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ 338 (452)
T KOG0514|consen 260 VVNLADS-NGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQ 338 (452)
T ss_pred HhhhhcC-CCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhh
Confidence 3678888 89999999999999999988887643211 112 23
Q ss_pred CCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHHHhhhhc----------------cchhhhHHHHhh
Q 042220 47 RGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLAAVLQKE----------------KTAVEEGEIKEL 110 (255)
Q Consensus 47 ~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~~~~~~~----------------~~~~~~~~~~~~ 110 (255)
.|+|+|++|+.+|+ .++++.|+ .+|+++|.+|.+|.|+|+.|+++||+| |..|-+..+-.-
T Consensus 339 ~gQTALMLAVSHGr--~d~vk~LL-acgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAl 415 (452)
T KOG0514|consen 339 HGQTALMLAVSHGR--VDMVKALL-ACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIAL 415 (452)
T ss_pred hcchhhhhhhhcCc--HHHHHHHH-HccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHH
Confidence 48899999999999 99999999 899999999999999999999999987 455555444443
Q ss_pred ccchH-HHHHHHHHHHHHhccCCCCCc
Q 042220 111 KPRHT-IVATLIATVTFAAGFTLPGGY 136 (255)
Q Consensus 111 ~~~~~-vvA~Liatvtf~a~l~~PGg~ 136 (255)
...+. +...|-+.+.|...+.|--|.
T Consensus 416 eagh~eIa~mlYa~~n~~~s~~p~s~~ 442 (452)
T KOG0514|consen 416 EAGHREIAVMLYAHMNIKRSKLPNSGD 442 (452)
T ss_pred hcCchHHHHHHHHHHHhhhhcCCCCCC
Confidence 34443 334455888888887764443
No 28
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.45 E-value=1.4e-13 Score=135.29 Aligned_cols=88 Identities=20% Similarity=0.197 Sum_probs=76.2
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHH--------------------
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLH-------------------- 65 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~-------------------- 65 (255)
++.+|. +|+||||+|+.+|+.++++.|+++++++ +.+|.+|+||||+|+..|+ .++
T Consensus 551 ~n~~d~-~G~TpLh~Aa~~g~~~~v~~Ll~~gadi-n~~d~~G~TpL~~A~~~g~--~~iv~~L~~~~~~~~~~~~~~~L 626 (823)
T PLN03192 551 PDIGDS-KGRTPLHIAASKGYEDCVLVLLKHACNV-HIRDANGNTALWNAISAKH--HKIFRILYHFASISDPHAAGDLL 626 (823)
T ss_pred CCCCCC-CCCCHHHHHHHcChHHHHHHHHhcCCCC-CCcCCCCCCHHHHHHHhCC--HHHHHHHHhcCcccCcccCchHH
Confidence 567888 9999999999999999999999999998 8899999999997776666 444
Q ss_pred -----------HHHHhhhhhhhhhccCCCCCchhHHHHHhhhhc
Q 042220 66 -----------SRLRNRSVEMLINKQDVNGNTPLHVLAAVLQKE 98 (255)
Q Consensus 66 -----------~~~Ll~~~~~~i~~~d~~G~TpLh~A~~~~~~~ 98 (255)
++.|+ +.|+++|.+|.+|+||||+|++.++.+
T Consensus 627 ~~Aa~~g~~~~v~~Ll-~~Gadin~~d~~G~TpLh~A~~~g~~~ 669 (823)
T PLN03192 627 CTAAKRNDLTAMKELL-KQGLNVDSEDHQGATALQVAMAEDHVD 669 (823)
T ss_pred HHHHHhCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHCCcHH
Confidence 45555 678899999999999999999987765
No 29
>PHA03095 ankyrin-like protein; Provisional
Probab=99.45 E-value=1.6e-13 Score=126.69 Aligned_cols=88 Identities=20% Similarity=0.169 Sum_probs=72.3
Q ss_pred ceeecCCCCCcHHHHHHHcChH--HHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHI--RVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVN 83 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~--~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~ 83 (255)
++.+|. .|+||||+|+..|+. ++++.+++.+.++ +.+|.+|+||||+|+..|+ .+++++|+ +.|++++.+|.+
T Consensus 215 ~~~~d~-~g~tpLh~Aa~~~~~~~~~v~~ll~~g~di-n~~d~~g~TpLh~A~~~~~--~~~v~~LL-~~gad~n~~~~~ 289 (471)
T PHA03095 215 PAATDM-LGNTPLHSMATGSSCKRSLVLPLLIAGISI-NARNRYGQTPLHYAAVFNN--PRACRRLI-ALGADINAVSSD 289 (471)
T ss_pred CcccCC-CCCCHHHHHHhcCCchHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCCcccCCC
Confidence 456777 888888888888764 5777888888887 7788888899999988888 88888888 678888888888
Q ss_pred CCchhHHHHHhhhhc
Q 042220 84 GNTPLHVLAAVLQKE 98 (255)
Q Consensus 84 G~TpLh~A~~~~~~~ 98 (255)
|+||||+|++.++.+
T Consensus 290 g~tpl~~A~~~~~~~ 304 (471)
T PHA03095 290 GNTPLSLMVRNNNGR 304 (471)
T ss_pred CCCHHHHHHHhCCHH
Confidence 899999888876543
No 30
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.44 E-value=3e-13 Score=112.20 Aligned_cols=87 Identities=18% Similarity=0.152 Sum_probs=72.2
Q ss_pred ceeecCCCCCcHHHHHHHc---ChHHHHHHHHHhCCCcccccccCCchHHHHHHHh--CCchHHHHHHHhhhhhhhhhcc
Q 042220 6 ACISDNDQKMTALLLAAGR---GHIRVVNEIISTCPDCCKQVDERGWNLLHFAMAS--SNLFQLHSRLRNRSVEMLINKQ 80 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~--g~~~~~~~~~Ll~~~~~~i~~~ 80 (255)
++.+|+++|+||||+|+.. ++.++++.|+++++++ +.+|.+|+||||+|+.. ++ .+++++|+ +.|++++.+
T Consensus 79 vn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadi-n~~d~~G~TpLh~a~~~~~~~--~~iv~~Li-~~gadin~~ 154 (209)
T PHA02859 79 VNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSI-TEEDEDGKNLLHMYMCNFNVR--INVIKLLI-DSGVSFLNK 154 (209)
T ss_pred CCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhccCC--HHHHHHHH-HcCCCcccc
Confidence 4556532799999998764 4799999999999998 88999999999998764 57 89999998 789999999
Q ss_pred CCCCCchhHHH-HHhhh
Q 042220 81 DVNGNTPLHVL-AAVLQ 96 (255)
Q Consensus 81 d~~G~TpLh~A-~~~~~ 96 (255)
|.+|+||||.+ +..++
T Consensus 155 d~~g~t~Lh~~a~~~~~ 171 (209)
T PHA02859 155 DFDNNNILYSYILFHSD 171 (209)
T ss_pred cCCCCcHHHHHHHhcCC
Confidence 99999999965 44433
No 31
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.44 E-value=2.8e-13 Score=87.79 Aligned_cols=54 Identities=26% Similarity=0.311 Sum_probs=45.3
Q ss_pred CCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHh
Q 042220 14 KMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRN 70 (255)
Q Consensus 14 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll 70 (255)
|+||||+|++.|+.+++++|++++.++ +.+|++|+||||+|+..|+ .+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~di-n~~d~~g~t~lh~A~~~g~--~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADI-NAQDEDGRTPLHYAAKNGN--IDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGT-T-B-TTS--HHHHHHHTT---HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHccC--HHHHHHHC
Confidence 789999999999999999999999998 7789999999999999999 99999875
No 32
>PHA03095 ankyrin-like protein; Provisional
Probab=99.44 E-value=5.5e-13 Score=123.08 Aligned_cols=85 Identities=20% Similarity=0.202 Sum_probs=78.9
Q ss_pred cceeecCCCCCcHHHHHHHcC---hHHHHHHHHHhCCCcccccccCCchHHHHHHHhC-CchHHHHHHHhhhhhhhhhcc
Q 042220 5 AACISDNDQKMTALLLAAGRG---HIRVVNEIISTCPDCCKQVDERGWNLLHFAMASS-NLFQLHSRLRNRSVEMLINKQ 80 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g---~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g-~~~~~~~~~Ll~~~~~~i~~~ 80 (255)
.++.+|+ .|.||||+|+..| +.++++.|++.++++ +.+|..|+||||+|+..+ + .+++++|+ +.|++++.+
T Consensus 39 ~vn~~~~-~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadi-n~~~~~g~TpLh~A~~~~~~--~~iv~lLl-~~ga~in~~ 113 (471)
T PHA03095 39 DVNFRGE-YGKTPLHLYLHYSSEKVKDIVRLLLEAGADV-NAPERCGFTPLHLYLYNATT--LDVIKLLI-KAGADVNAK 113 (471)
T ss_pred CcccCCC-CCCCHHHHHHHhcCCChHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCc--HHHHHHHH-HcCCCCCCC
Confidence 4577888 9999999999998 999999999999998 889999999999999999 7 89999998 789999999
Q ss_pred CCCCCchhHHHHHh
Q 042220 81 DVNGNTPLHVLAAV 94 (255)
Q Consensus 81 d~~G~TpLh~A~~~ 94 (255)
|.+|+||||+|+..
T Consensus 114 ~~~g~tpLh~a~~~ 127 (471)
T PHA03095 114 DKVGRTPLHVYLSG 127 (471)
T ss_pred CCCCCCHHHHHhhC
Confidence 99999999999943
No 33
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.44 E-value=1.2e-13 Score=135.38 Aligned_cols=88 Identities=22% Similarity=0.277 Sum_probs=82.4
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
++.+++ +|.||||.|+.+|+.++|+.|+++++++ +.+|+.|+||||.|+..|+ .+++++|+ +.|+++|..|.+|+
T Consensus 533 v~~~~~-r~~TpLh~A~~~g~v~~VkfLLe~gAdv-~ak~~~G~TPLH~Aa~~G~--~~i~~LLl-k~GA~vna~d~~g~ 607 (1143)
T KOG4177|consen 533 VDLRTG-RGYTPLHVAVHYGNVDLVKFLLEHGADV-NAKDKLGYTPLHQAAQQGH--NDIAELLL-KHGASVNAADLDGF 607 (1143)
T ss_pred eehhcc-cccchHHHHHhcCCchHHHHhhhCCccc-cccCCCCCChhhHHHHcCh--HHHHHHHH-HcCCCCCcccccCc
Confidence 456667 8999999999999999999999999999 8899999999999999999 99999999 89999999999999
Q ss_pred chhHHHHHhhhhc
Q 042220 86 TPLHVLAAVLQKE 98 (255)
Q Consensus 86 TpLh~A~~~~~~~ 98 (255)
||||+|++.++.+
T Consensus 608 TpL~iA~~lg~~~ 620 (1143)
T KOG4177|consen 608 TPLHIAVRLGYLS 620 (1143)
T ss_pred chhHHHHHhcccc
Confidence 9999999987654
No 34
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.43 E-value=1.1e-13 Score=90.43 Aligned_cols=56 Identities=27% Similarity=0.296 Sum_probs=27.9
Q ss_pred HHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHH
Q 042220 33 IISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVL 91 (255)
Q Consensus 33 Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A 91 (255)
|+++++...+.+|..|+||||+|+.+|+ .+++++|+ +.+++++.+|.+|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~--~~~v~~Ll-~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGH--SEVVRLLL-QNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT---HHHHHHHH-HCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCc--HHHHHHHH-HCcCCCCCCcCCCCCHHHhC
Confidence 4556633337778888888888888888 88888888 77888888888888888876
No 35
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.43 E-value=3.7e-13 Score=129.18 Aligned_cols=84 Identities=17% Similarity=0.096 Sum_probs=56.3
Q ss_pred cceeecCCCCCcHHHHHHHcCh--HHHHHHHHHhCCCcccccccCCchHHHHHH--------------------------
Q 042220 5 AACISDNDQKMTALLLAAGRGH--IRVVNEIISTCPDCCKQVDERGWNLLHFAM-------------------------- 56 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~--~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~-------------------------- 56 (255)
-++.+|+ +|+||||+|++.|+ .++++.|+++|+++ +.+|.+|+||||.|+
T Consensus 204 DVN~kD~-~G~TPLH~Aa~~g~~~~eIVklLLe~GADV-N~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~ 281 (764)
T PHA02716 204 NVNLQNN-HLITPLHTYLITGNVCASVIKKIIELGGDM-DMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNI 281 (764)
T ss_pred CCCCCCC-CCCCHHHHHHHcCCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccc
Confidence 3456666 77777777777764 36777777777776 667777777777543
Q ss_pred -----------HhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHHH
Q 042220 57 -----------ASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLAA 93 (255)
Q Consensus 57 -----------~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~~ 93 (255)
+.|+ .++++.|+ +.|++++.+|.+|+||||+|+.
T Consensus 282 ~~~L~~~i~AA~~g~--leiVklLL-e~GAdIN~kD~~G~TPLH~Aaa 326 (764)
T PHA02716 282 PMILHSYITLARNID--ISVVYSFL-QPGVKLHYKDSAGRTCLHQYIL 326 (764)
T ss_pred hhhhHHHHHHHHcCC--HHHHHHHH-hCCCceeccCCCCCCHHHHHHH
Confidence 2344 55666666 5677777777777777777654
No 36
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.43 E-value=7.2e-14 Score=110.19 Aligned_cols=88 Identities=18% Similarity=0.146 Sum_probs=67.5
Q ss_pred CcceeecCCCCCcHHHHHHHcChHHHHHHHHHhC------CCcccccccCCchHHHHHHHhCCchH---HHHHHHhhhhh
Q 042220 4 SAACISDNDQKMTALLLAAGRGHIRVVNEIISTC------PDCCKQVDERGWNLLHFAMASSNLFQ---LHSRLRNRSVE 74 (255)
Q Consensus 4 ~~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~------~~~~~~~d~~G~t~Lh~A~~~g~~~~---~~~~~Ll~~~~ 74 (255)
...+.+|+ +|+||||+|++.|+.+ +.+...+ +.....+|.+|+||||+|+..++ . +.+++|+ +.|
T Consensus 8 ~~~~~~d~-~g~tpLh~A~~~g~~~--~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~--~~~~e~v~~Ll-~~g 81 (154)
T PHA02736 8 IFASEPDI-EGENILHYLCRNGGVT--DLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDK--ADPQEKLKLLM-EWG 81 (154)
T ss_pred hHHHhcCC-CCCCHHHHHHHhCCHH--HHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCc--hhHHHHHHHHH-HcC
Confidence 34567788 9999999999999843 2222211 11224578999999999999998 5 4577887 789
Q ss_pred hhhhccC-CCCCchhHHHHHhhhh
Q 042220 75 MLINKQD-VNGNTPLHVLAAVLQK 97 (255)
Q Consensus 75 ~~i~~~d-~~G~TpLh~A~~~~~~ 97 (255)
+++|.+| .+|+||||+|++.++.
T Consensus 82 adin~~~~~~g~T~Lh~A~~~~~~ 105 (154)
T PHA02736 82 ADINGKERVFGNTPLHIAVYTQNY 105 (154)
T ss_pred CCccccCCCCCCcHHHHHHHhCCH
Confidence 9999998 4899999999998543
No 37
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.42 E-value=7.2e-14 Score=123.85 Aligned_cols=88 Identities=19% Similarity=0.164 Sum_probs=80.9
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
+|.... .+.|||..||.-|+.|++++|+++++|+ +..|+.|.|.||+|+.+|+ .+++++|+ +.|+++|+++..||
T Consensus 110 VN~tT~-TNStPLraACfDG~leivKyLvE~gad~-~IanrhGhTcLmIa~ykGh--~~I~qyLl-e~gADvn~ks~kGN 184 (615)
T KOG0508|consen 110 VNDTTR-TNSTPLRAACFDGHLEIVKYLVEHGADP-EIANRHGHTCLMIACYKGH--VDIAQYLL-EQGADVNAKSYKGN 184 (615)
T ss_pred cccccc-cCCccHHHHHhcchhHHHHHHHHcCCCC-cccccCCCeeEEeeeccCc--hHHHHHHH-HhCCCcchhcccCc
Confidence 444444 6679999999999999999999999999 8999999999999999999 99999999 89999999999999
Q ss_pred chhHHHHHhhhhc
Q 042220 86 TPLHVLAAVLQKE 98 (255)
Q Consensus 86 TpLh~A~~~~~~~ 98 (255)
|+||.+++.|+.+
T Consensus 185 TALH~caEsG~vd 197 (615)
T KOG0508|consen 185 TALHDCAESGSVD 197 (615)
T ss_pred hHHHhhhhcccHH
Confidence 9999999998876
No 38
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.42 E-value=3.1e-13 Score=125.32 Aligned_cols=85 Identities=18% Similarity=0.136 Sum_probs=77.0
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHh-CCchHHHHHHHhhhhhhhhhccCC-
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMAS-SNLFQLHSRLRNRSVEMLINKQDV- 82 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~-g~~~~~~~~~Ll~~~~~~i~~~d~- 82 (255)
.++.+|+ +|+||||.|++.|+.++++.|++.++++ +.+|..|+||||+|+.. ++ .+++++|+ +.|+++|.+|.
T Consensus 193 d~n~~d~-~g~tpLh~A~~~~~~~iv~~Ll~~ga~i-n~~d~~g~TpLh~A~~~~~~--~~iv~~Ll-~~gadvn~~~~~ 267 (477)
T PHA02878 193 NVNIPDK-TNNSPLHHAVKHYNKPIVHILLENGAST-DARDKCGNTPLHISVGYCKD--YDILKLLL-EHGVDVNAKSYI 267 (477)
T ss_pred CCCCcCC-CCCCHHHHHHHhCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHhcCC--HHHHHHHH-HcCCCCCccCCC
Confidence 3567888 9999999999999999999999999998 88999999999999976 68 89999999 78999999986
Q ss_pred CCCchhHHHHHh
Q 042220 83 NGNTPLHVLAAV 94 (255)
Q Consensus 83 ~G~TpLh~A~~~ 94 (255)
.|.||||+|...
T Consensus 268 ~g~TpLh~A~~~ 279 (477)
T PHA02878 268 LGLTALHSSIKS 279 (477)
T ss_pred CCCCHHHHHccC
Confidence 799999999544
No 39
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.42 E-value=3.5e-13 Score=132.58 Aligned_cols=133 Identities=17% Similarity=0.095 Sum_probs=100.2
Q ss_pred CCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHH
Q 042220 13 QKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLA 92 (255)
Q Consensus 13 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~ 92 (255)
++.++||.||..|+.++++.|++.+.++ +..|.+|+||||+|+.+|+ .++++.|+ +.|+++|.+|.+|+||||+|+
T Consensus 524 ~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~-n~~d~~G~TpLh~Aa~~g~--~~~v~~Ll-~~gadin~~d~~G~TpL~~A~ 599 (823)
T PLN03192 524 NMASNLLTVASTGNAALLEELLKAKLDP-DIGDSKGRTPLHIAASKGY--EDCVLVLL-KHACNVHIRDANGNTALWNAI 599 (823)
T ss_pred cchhHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCh--HHHHHHHH-hcCCCCCCcCCCCCCHHHHHH
Confidence 5679999999999999999999999998 8899999999999999999 99999999 789999999999999999999
Q ss_pred Hhhhhc--c-chh-hhHHHHhhccchHHHHHHHHHHHHHhccCCCCCccCCCCCCCccccc
Q 042220 93 AVLQKE--K-TAV-EEGEIKELKPRHTIVATLIATVTFAAGFTLPGGYWGKEGPIPGTSIL 149 (255)
Q Consensus 93 ~~~~~~--~-~~~-~~~~~~~~~~~~~vvA~Liatvtf~a~l~~PGg~~~~~~~~~g~~~~ 149 (255)
..+|.+ + +.. ......+.+++.+..|+.-........+...|...+..+.++.+|+.
T Consensus 600 ~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh 660 (823)
T PLN03192 600 SAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQ 660 (823)
T ss_pred HhCCHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 997765 0 000 00000112334455555554444444455567666656666666765
No 40
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.41 E-value=4.1e-13 Score=124.26 Aligned_cols=139 Identities=17% Similarity=0.112 Sum_probs=105.2
Q ss_pred ceeecCCCCCcHHHHHHHcC--hHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCC
Q 042220 6 ACISDNDQKMTALLLAAGRG--HIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVN 83 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g--~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~ 83 (255)
++.+|. +|.||||+|+..| +.++++.|+++++++ +.+|..|+||||+|+..|+ .+++++|+ +.|++++.+|..
T Consensus 134 ~~~~~~-~g~t~L~~A~~~~~~~~~iv~~Ll~~g~di-n~~d~~g~tpL~~A~~~~~--~~iv~~Ll-~~ga~~~~~~~~ 208 (480)
T PHA03100 134 VNIKNS-DGENLLHLYLESNKIDLKILKLLIDKGVDI-NAKNRYGYTPLHIAVEKGN--IDVIKFLL-DNGADINAGDIE 208 (480)
T ss_pred CCccCC-CCCcHHHHHHHcCCChHHHHHHHHHCCCCc-ccccCCCCCHHHHHHHhCC--HHHHHHHH-HcCCCccCCCCC
Confidence 466788 9999999999999 999999999999998 7889999999999999999 99999999 789999999999
Q ss_pred C------CchhHHHHHhhh--hc------cchhhhHHHHhhccchHHHHHHHHHHHHHhccCCCCCccCCCCCCCccccc
Q 042220 84 G------NTPLHVLAAVLQ--KE------KTAVEEGEIKELKPRHTIVATLIATVTFAAGFTLPGGYWGKEGPIPGTSIL 149 (255)
Q Consensus 84 G------~TpLh~A~~~~~--~~------~~~~~~~~~~~~~~~~~vvA~Liatvtf~a~l~~PGg~~~~~~~~~g~~~~ 149 (255)
| .||||.|+..++ .+ +...........++++++.|+.-.......-+-..|...+..+.++.+|+.
T Consensus 209 ~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~ 288 (480)
T PHA03100 209 TLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLH 288 (480)
T ss_pred CCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHH
Confidence 9 899999999876 33 111111122234566666666554444445555567755555555556654
No 41
>PHA02946 ankyin-like protein; Provisional
Probab=99.40 E-value=7.8e-13 Score=121.60 Aligned_cols=139 Identities=16% Similarity=0.121 Sum_probs=98.8
Q ss_pred cceeecCCCCCcHHHHHHHcC--hHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCC
Q 042220 5 AACISDNDQKMTALLLAAGRG--HIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDV 82 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g--~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~ 82 (255)
.++.+|+ +|+||||+|+..+ +.++++.|+++++++....|.+|+|||| |+..++ .++++.|+ +.|++++.+|.
T Consensus 97 din~~d~-~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~--~~vv~~Ll-~~gad~~~~d~ 171 (446)
T PHA02946 97 DPNACDK-QHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPS--ERVFKKIM-SIGFEARIVDK 171 (446)
T ss_pred CCCCCCC-CCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCC--hHHHHHHH-hccccccccCC
Confidence 3577899 9999999998876 4799999999999984457899999998 666788 89999998 78999999999
Q ss_pred CCCchhHHHHHhhhhc--------cchhhhHHHHhhccchHHHHHHHH--HHHHHhccCCCCCccCCCCCCCccccc
Q 042220 83 NGNTPLHVLAAVLQKE--------KTAVEEGEIKELKPRHTIVATLIA--TVTFAAGFTLPGGYWGKEGPIPGTSIL 149 (255)
Q Consensus 83 ~G~TpLh~A~~~~~~~--------~~~~~~~~~~~~~~~~~vvA~Lia--tvtf~a~l~~PGg~~~~~~~~~g~~~~ 149 (255)
.|+||||+|+..++.+ +.....+.....++++++.|+.-. .+....-+ .+|...+..+..+.+|+.
T Consensus 172 ~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lL-l~gadin~~d~~G~TpLh 247 (446)
T PHA02946 172 FGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLL-LPSTDVNKQNKFGDSPLT 247 (446)
T ss_pred CCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHH-HcCCCCCCCCCCCCCHHH
Confidence 9999999988763321 111111122345677777776532 22222222 256666666666777875
No 42
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.39 E-value=8.3e-13 Score=126.75 Aligned_cols=85 Identities=12% Similarity=0.051 Sum_probs=74.8
Q ss_pred ceee-cCCCCCcHHHHHHH--cChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCC
Q 042220 6 ACIS-DNDQKMTALLLAAG--RGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDV 82 (255)
Q Consensus 6 v~~~-d~~~G~tpLh~Aa~--~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~ 82 (255)
++.+ |+ .|+||||.|+. +++.+++++|+++++++ +.+|.+|+||||+|+..|+...++++.|+ +.|+++|.+|.
T Consensus 169 IN~~~d~-~G~TpLH~A~~n~~~~~eIVklLLe~GADV-N~kD~~G~TPLH~Aa~~g~~~~eIVklLL-e~GADVN~kD~ 245 (764)
T PHA02716 169 LNYVCKK-TGYGILHAYLGNMYVDIDILEWLCNNGVNV-NLQNNHLITPLHTYLITGNVCASVIKKII-ELGGDMDMKCV 245 (764)
T ss_pred cccccCC-CCCcHHHHHHHhccCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCCCHHHHHHHH-HcCCCCCCCCC
Confidence 5666 77 89999999865 46789999999999998 88999999999999999961148999999 78999999999
Q ss_pred CCCchhHHHHH
Q 042220 83 NGNTPLHVLAA 93 (255)
Q Consensus 83 ~G~TpLh~A~~ 93 (255)
+|+||||.|+.
T Consensus 246 ~G~TPLh~Ai~ 256 (764)
T PHA02716 246 NGMSPIMTYII 256 (764)
T ss_pred CCCCHHHHHHH
Confidence 99999999864
No 43
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.38 E-value=2.5e-13 Score=109.95 Aligned_cols=89 Identities=25% Similarity=0.226 Sum_probs=83.4
Q ss_pred CcceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCC
Q 042220 4 SAACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVN 83 (255)
Q Consensus 4 ~~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~ 83 (255)
+.+|..|+ .|.|||.+|+.+|+++++++|++.++++ ....+...++|.+|+..|. .+++++|+ .++.++|..|.+
T Consensus 151 n~VN~~De-~GfTpLiWAaa~G~i~vV~fLL~~GAdp-~~lgk~resALsLAt~ggy--tdiV~lLL-~r~vdVNvyDwN 225 (296)
T KOG0502|consen 151 NKVNACDE-FGFTPLIWAAAKGHIPVVQFLLNSGADP-DALGKYRESALSLATRGGY--TDIVELLL-TREVDVNVYDWN 225 (296)
T ss_pred ccccCccc-cCchHhHHHHhcCchHHHHHHHHcCCCh-hhhhhhhhhhHhHHhcCCh--HHHHHHHH-hcCCCcceeccC
Confidence 56899999 9999999999999999999999999998 7788889999999999999 99999999 899999999999
Q ss_pred CCchhHHHHHhhhh
Q 042220 84 GNTPLHVLAAVLQK 97 (255)
Q Consensus 84 G~TpLh~A~~~~~~ 97 (255)
|-|||-+|++-+|.
T Consensus 226 GgTpLlyAvrgnhv 239 (296)
T KOG0502|consen 226 GGTPLLYAVRGNHV 239 (296)
T ss_pred CCceeeeeecCChH
Confidence 99999999998554
No 44
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.38 E-value=9.8e-13 Score=114.19 Aligned_cols=83 Identities=17% Similarity=0.117 Sum_probs=76.3
Q ss_pred cCCCCCcHHHHHHHcChHHHHHHHHHhCCCccccc-ccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchh
Q 042220 10 DNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQV-DERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPL 88 (255)
Q Consensus 10 d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~-d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpL 88 (255)
|+ +|.||||+|++.|+.++++.|+++|+++ +.+ +..|+||||.|+..++ .+++++|+ +.|++++.+|.+|.|||
T Consensus 67 d~-~g~TpLh~Aa~~~~~eivklLL~~GADV-N~~~~~~g~TpLh~Aa~~~~--~eivklLL-~~GAdin~kd~~G~TpL 141 (300)
T PHA02884 67 EN-SKTNPLIYAIDCDNDDAAKLLIRYGADV-NRYAEEAKITPLYISVLHGC--LKCLEILL-SYGADINIQTNDMVTPI 141 (300)
T ss_pred CC-CCCCHHHHHHHcCCHHHHHHHHHcCCCc-CcccCCCCCCHHHHHHHcCC--HHHHHHHH-HCCCCCCCCCCCCCCHH
Confidence 56 8999999999999999999999999998 665 5679999999999999 99999999 78999999999999999
Q ss_pred HHHHHhhhh
Q 042220 89 HVLAAVLQK 97 (255)
Q Consensus 89 h~A~~~~~~ 97 (255)
|+|++.++.
T Consensus 142 ~~A~~~~~~ 150 (300)
T PHA02884 142 ELALMICNN 150 (300)
T ss_pred HHHHHhCCh
Confidence 999987543
No 45
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.38 E-value=4.3e-13 Score=87.61 Aligned_cols=51 Identities=29% Similarity=0.331 Sum_probs=33.3
Q ss_pred CCcceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHH
Q 042220 3 KSAACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFA 55 (255)
Q Consensus 3 ~~~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A 55 (255)
+..++.+|+ +|.||||+|+++|+.+++++|++.+.++ +.+|.+|+||||+|
T Consensus 6 ~~~~n~~d~-~G~T~LH~A~~~g~~~~v~~Ll~~g~d~-~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 6 PADVNAQDK-YGNTPLHWAARYGHSEVVRLLLQNGADP-NAKDKDGQTPLHYA 56 (56)
T ss_dssp T--TT---T-TS--HHHHHHHHT-HHHHHHHHHCT--T-T---TTS--HHHH-
T ss_pred cCCCcCcCC-CCCcHHHHHHHcCcHHHHHHHHHCcCCC-CCCcCCCCCHHHhC
Confidence 566788999 9999999999999999999999989888 89999999999997
No 46
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.38 E-value=1.2e-12 Score=93.42 Aligned_cols=64 Identities=25% Similarity=0.297 Sum_probs=58.3
Q ss_pred CCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccC
Q 042220 14 KMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQD 81 (255)
Q Consensus 14 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d 81 (255)
|+||||+|+.+|+.+++++|+++++++ +.+|.+|+||||+|+.+|+ .+++++|+ +.|++++.+|
T Consensus 26 ~~~~l~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~--~~~~~~Ll-~~g~~~~~~n 89 (89)
T PF12796_consen 26 GNTALHYAAENGNLEIVKLLLENGADI-NSQDKNGNTALHYAAENGN--LEIVKLLL-EHGADVNIRN 89 (89)
T ss_dssp SSBHHHHHHHTTTHHHHHHHHHTTTCT-T-BSTTSSBHHHHHHHTTH--HHHHHHHH-HTTT-TTSS-
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcccc-cccCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCCCCcC
Confidence 689999999999999999999999998 8899999999999999999 99999999 7799999876
No 47
>PHA02795 ankyrin-like protein; Provisional
Probab=99.37 E-value=1e-12 Score=118.72 Aligned_cols=80 Identities=20% Similarity=0.055 Sum_probs=73.0
Q ss_pred CCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHH
Q 042220 13 QKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLA 92 (255)
Q Consensus 13 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~ 92 (255)
.|.+++|.|+.+++.|+++.|+++++++ +.+|..|+||||+|+..|+ .+++++|+ +.|+++|.+|.+|.||||+|+
T Consensus 187 ~~~t~l~~a~~~~~~eIve~LIs~GADI-N~kD~~G~TpLh~Aa~~g~--~eiVelLL-~~GAdIN~~d~~G~TpLh~Aa 262 (437)
T PHA02795 187 IQYTRGFLVDEPTVLEIYKLCIPYIEDI-NQLDAGGRTLLYRAIYAGY--IDLVSWLL-ENGANVNAVMSNGYTCLDVAV 262 (437)
T ss_pred hccchhHHHHhcCHHHHHHHHHhCcCCc-CcCCCCCCCHHHHHHHcCC--HHHHHHHH-HCCCCCCCcCCCCCCHHHHHH
Confidence 4678899999999999999999999998 8899999999999999999 99999999 789999999999999999999
Q ss_pred Hhhh
Q 042220 93 AVLQ 96 (255)
Q Consensus 93 ~~~~ 96 (255)
..++
T Consensus 263 ~~g~ 266 (437)
T PHA02795 263 DRGS 266 (437)
T ss_pred HcCC
Confidence 8864
No 48
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.37 E-value=1.4e-12 Score=125.96 Aligned_cols=86 Identities=21% Similarity=0.148 Sum_probs=46.6
Q ss_pred ceeecCCCCCcHHHHHHHcC-hHHHHHHHHHhCCCcccccccCCchHHHHHHHhC-CchHHHHHHHhhhhhhhhhccCCC
Q 042220 6 ACISDNDQKMTALLLAAGRG-HIRVVNEIISTCPDCCKQVDERGWNLLHFAMASS-NLFQLHSRLRNRSVEMLINKQDVN 83 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g-~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g-~~~~~~~~~Ll~~~~~~i~~~d~~ 83 (255)
++.+|. +|+||||+|+..| +.+.++.|+..++++ +.+|..|+||||+|+..+ + .++++.|+ +.|+++|.+|.+
T Consensus 300 in~~d~-~g~TpLh~Aa~~g~~~~~v~~Ll~~gadi-n~~d~~g~TpLh~A~~~~~~--~~iv~lLl-~~gadin~~d~~ 374 (682)
T PHA02876 300 VNAKNI-KGETPLYLMAKNGYDTENIRTLIMLGADV-NAADRLYITPLHQASTLDRN--KDIVITLL-ELGANVNARDYC 374 (682)
T ss_pred CCCcCC-CCCCHHHHHHHhCCCHHHHHHHHHcCCCC-CCcccCCCcHHHHHHHhCCc--HHHHHHHH-HcCCCCccCCCC
Confidence 344555 5666666666655 355555555555555 455555555555555533 3 34444444 455555555555
Q ss_pred CCchhHHHHHhhh
Q 042220 84 GNTPLHVLAAVLQ 96 (255)
Q Consensus 84 G~TpLh~A~~~~~ 96 (255)
|+||||+|+..++
T Consensus 375 G~TpLh~Aa~~~~ 387 (682)
T PHA02876 375 DKTPIHYAAVRNN 387 (682)
T ss_pred CCCHHHHHHHcCC
Confidence 5555555555433
No 49
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.36 E-value=1.2e-12 Score=126.46 Aligned_cols=85 Identities=20% Similarity=0.151 Sum_probs=76.5
Q ss_pred ceeecCCCCCcHHHHHHHcChH-HHHHHHHHhCCCcccccccCCchHHHHHHHhC-CchHHHHHHHhhhhhhhhhccCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHI-RVVNEIISTCPDCCKQVDERGWNLLHFAMASS-NLFQLHSRLRNRSVEMLINKQDVN 83 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~-~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g-~~~~~~~~~Ll~~~~~~i~~~d~~ 83 (255)
++.+|. .|+||||+|+..|+. ++++.|++.++++ +.+|.+|+||||+|+..| . .+.++.|+ ..|++++.+|..
T Consensus 266 vn~~d~-~g~TpLh~Aa~~~~~~~iv~lLl~~gadi-n~~d~~g~TpLh~Aa~~g~~--~~~v~~Ll-~~gadin~~d~~ 340 (682)
T PHA02876 266 VNSIDD-CKNTPLHHASQAPSLSRLVPKLLERGADV-NAKNIKGETPLYLMAKNGYD--TENIRTLI-MLGADVNAADRL 340 (682)
T ss_pred CCCCCC-CCCCHHHHHHhCCCHHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhCCC--HHHHHHHH-HcCCCCCCcccC
Confidence 566778 899999999999986 6889999999998 889999999999999998 6 78888888 789999999999
Q ss_pred CCchhHHHHHhh
Q 042220 84 GNTPLHVLAAVL 95 (255)
Q Consensus 84 G~TpLh~A~~~~ 95 (255)
|.||||+|+..+
T Consensus 341 g~TpLh~A~~~~ 352 (682)
T PHA02876 341 YITPLHQASTLD 352 (682)
T ss_pred CCcHHHHHHHhC
Confidence 999999999864
No 50
>PHA02798 ankyrin-like protein; Provisional
Probab=99.35 E-value=1.4e-12 Score=121.31 Aligned_cols=87 Identities=17% Similarity=0.060 Sum_probs=77.0
Q ss_pred cceeecCCCCCcHHHHHHHc-----ChHHHHHHHHHhCCCcccccccCCchHHHHHHHhC---CchHHHHHHHhhhhhhh
Q 042220 5 AACISDNDQKMTALLLAAGR-----GHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASS---NLFQLHSRLRNRSVEML 76 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~-----g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g---~~~~~~~~~Ll~~~~~~ 76 (255)
-++.+|+ +|.||||.|+.+ ++.++++.|+++|+++ +.+|..|+||||+|+..+ + .+++++|+ +.|++
T Consensus 63 dvn~~d~-~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~Gadi-N~~d~~G~TpLh~a~~~~~~~~--~~iv~~Ll-~~Gad 137 (489)
T PHA02798 63 NVNGLDN-EYSTPLCTILSNIKDYKHMLDIVKILIENGADI-NKKNSDGETPLYCLLSNGYINN--LEILLFMI-ENGAD 137 (489)
T ss_pred CCCCCCC-CCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCC-CCCCCCcCcHHHHHHHcCCcCh--HHHHHHHH-HcCCC
Confidence 3567788 999999998864 6789999999999998 889999999999999876 5 78999998 78999
Q ss_pred hhccCCCCCchhHHHHHhhh
Q 042220 77 INKQDVNGNTPLHVLAAVLQ 96 (255)
Q Consensus 77 i~~~d~~G~TpLh~A~~~~~ 96 (255)
++.+|.+|.||||+|++.++
T Consensus 138 vn~~d~~g~tpL~~a~~~~~ 157 (489)
T PHA02798 138 TTLLDKDGFTMLQVYLQSNH 157 (489)
T ss_pred ccccCCCCCcHHHHHHHcCC
Confidence 99999999999999998765
No 51
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.35 E-value=9.3e-13 Score=113.55 Aligned_cols=90 Identities=22% Similarity=0.278 Sum_probs=83.8
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
+|.|-+..|.|+|+.|+.+|+.++++.|+..++|+ |.+|.+|.|+|++|+++|| .+++++|+...++++...|.+|.
T Consensus 332 VNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdV-NiQDdDGSTALMCA~EHGh--kEivklLLA~p~cd~sLtD~DgS 408 (452)
T KOG0514|consen 332 VNAKASQHGQTALMLAVSHGRVDMVKALLACGADV-NIQDDDGSTALMCAAEHGH--KEIVKLLLAVPSCDISLTDVDGS 408 (452)
T ss_pred cchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCC-ccccCCccHHHhhhhhhCh--HHHHHHHhccCcccceeecCCCc
Confidence 45555547999999999999999999999999999 8999999999999999999 99999999788899999999999
Q ss_pred chhHHHHHhhhhc
Q 042220 86 TPLHVLAAVLQKE 98 (255)
Q Consensus 86 TpLh~A~~~~~~~ 98 (255)
|+|.+|-..||.+
T Consensus 409 TAl~IAleagh~e 421 (452)
T KOG0514|consen 409 TALSIALEAGHRE 421 (452)
T ss_pred hhhhhHHhcCchH
Confidence 9999999998876
No 52
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.30 E-value=4.8e-12 Score=117.89 Aligned_cols=49 Identities=18% Similarity=0.102 Sum_probs=30.0
Q ss_pred ccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHHHhhh
Q 042220 45 DERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLAAVLQ 96 (255)
Q Consensus 45 d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~~~~~ 96 (255)
|..|+||||+|+..++ .+++++|+ +.|+++|.+|.+|+||||+|++.++
T Consensus 253 d~~G~TpL~~Aa~~~~--~~~v~~LL-~~Gadin~~d~~G~TpL~~A~~~~~ 301 (494)
T PHA02989 253 DKKGFNPLLISAKVDN--YEAFNYLL-KLGDDIYNVSKDGDTVLTYAIKHGN 301 (494)
T ss_pred CCCCCCHHHHHHHhcC--HHHHHHHH-HcCCCccccCCCCCCHHHHHHHcCC
Confidence 4446666666666666 66666666 5566666666666666666666544
No 53
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.29 E-value=1.3e-11 Score=91.95 Aligned_cols=84 Identities=31% Similarity=0.387 Sum_probs=76.2
Q ss_pred eecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCch
Q 042220 8 ISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTP 87 (255)
Q Consensus 8 ~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~Tp 87 (255)
.+|. +|+||||+|++.|+.++++.|++.+++. ..+|..|.+|+|.|+..++ .++++.++ +.+..++..|..|.||
T Consensus 2 ~~~~-~g~t~l~~a~~~~~~~~i~~li~~~~~~-~~~~~~g~~~l~~a~~~~~--~~~~~~ll-~~~~~~~~~~~~~~~~ 76 (126)
T cd00204 2 ARDE-DGRTPLHLAASNGHLEVVKLLLENGADV-NAKDNDGRTPLHLAAKNGH--LEIVKLLL-EKGADVNARDKDGNTP 76 (126)
T ss_pred CcCc-CCCCHHHHHHHcCcHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHcCC--HHHHHHHH-HcCCCccccCCCCCCH
Confidence 4566 8999999999999999999999999887 7789999999999999999 99999998 6777889999999999
Q ss_pred hHHHHHhhh
Q 042220 88 LHVLAAVLQ 96 (255)
Q Consensus 88 Lh~A~~~~~ 96 (255)
+|+|++.++
T Consensus 77 l~~a~~~~~ 85 (126)
T cd00204 77 LHLAARNGN 85 (126)
T ss_pred HHHHHHcCc
Confidence 999999844
No 54
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.28 E-value=1.2e-11 Score=115.27 Aligned_cols=85 Identities=14% Similarity=0.198 Sum_probs=66.7
Q ss_pred ceeecCCCCCcHHHHHHHc---ChHHHHHHHHHhCCCcccccccCCchHHHHHHHh--CCchHHHHHHHhhhhhhhhhc-
Q 042220 6 ACISDNDQKMTALLLAAGR---GHIRVVNEIISTCPDCCKQVDERGWNLLHFAMAS--SNLFQLHSRLRNRSVEMLINK- 79 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~--g~~~~~~~~~Ll~~~~~~i~~- 79 (255)
++.+|+ +|+||||.|+.. |+.++++.|+++|+++.+.+|..|+||||+|+.. ++ .++++.|+ +.|++++.
T Consensus 101 in~~d~-~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~--~~iv~~Ll-~~Gadi~~~ 176 (494)
T PHA02989 101 INLKTF-NGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVK--KDVIKILL-SFGVNLFEK 176 (494)
T ss_pred CCCCCC-CCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCC--HHHHHHHH-HcCCCcccc
Confidence 567777 888888877654 6788888888888887456788888888888764 46 78888888 77888887
Q ss_pred cCCCCCchhHHHHHh
Q 042220 80 QDVNGNTPLHVLAAV 94 (255)
Q Consensus 80 ~d~~G~TpLh~A~~~ 94 (255)
+|..|.||||+|.+.
T Consensus 177 ~~~~g~tpL~~a~~~ 191 (494)
T PHA02989 177 TSLYGLTPMNIYLRN 191 (494)
T ss_pred ccccCCChHHHHHhc
Confidence 577888888888765
No 55
>PHA02798 ankyrin-like protein; Provisional
Probab=99.28 E-value=1.4e-11 Score=114.65 Aligned_cols=87 Identities=16% Similarity=0.187 Sum_probs=76.5
Q ss_pred cceeecCCCCCcHHHHHHHcC---hHHHHHHHHHhCCCcccccccCCchHHHHHHHhCC-chHHHHHHHhhhhhhhhhcc
Q 042220 5 AACISDNDQKMTALLLAAGRG---HIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSN-LFQLHSRLRNRSVEMLINKQ 80 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g---~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~-~~~~~~~~Ll~~~~~~i~~~ 80 (255)
-+|.+|+ +|+||||+|+.+| +.++++.|+++|+++ +.+|.+|+||||+|++.++ ...+++++|+ +.|++++.+
T Consensus 101 diN~~d~-~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll-~~gadin~~ 177 (489)
T PHA02798 101 DINKKNS-DGETPLYCLLSNGYINNLEILLFMIENGADT-TLLDKDGFTMLQVYLQSNHHIDIEIIKLLL-EKGVDINTH 177 (489)
T ss_pred CCCCCCC-CcCcHHHHHHHcCCcChHHHHHHHHHcCCCc-cccCCCCCcHHHHHHHcCCcchHHHHHHHH-HhCCCcccc
Confidence 3678899 9999999999975 789999999999998 8899999999999999875 3378999998 789999988
Q ss_pred C-CCCCchhHHHHHh
Q 042220 81 D-VNGNTPLHVLAAV 94 (255)
Q Consensus 81 d-~~G~TpLh~A~~~ 94 (255)
| ..|.||||.+.+.
T Consensus 178 ~~~~~~t~Lh~~~~~ 192 (489)
T PHA02798 178 NNKEKYDTLHCYFKY 192 (489)
T ss_pred cCcCCCcHHHHHHHh
Confidence 5 5789999998764
No 56
>PHA02730 ankyrin-like protein; Provisional
Probab=99.26 E-value=1.1e-11 Score=117.22 Aligned_cols=81 Identities=14% Similarity=-0.001 Sum_probs=73.1
Q ss_pred eecCCCCCcHHHHHHHcC---hHHHHHHHHHhCCCcccccccCCchHHHHHHHhC--CchHHHHHHHhhhhh--hhhhcc
Q 042220 8 ISDNDQKMTALLLAAGRG---HIRVVNEIISTCPDCCKQVDERGWNLLHFAMASS--NLFQLHSRLRNRSVE--MLINKQ 80 (255)
Q Consensus 8 ~~d~~~G~tpLh~Aa~~g---~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g--~~~~~~~~~Ll~~~~--~~i~~~ 80 (255)
.+|+ +|+||||+|+.+| +.|++++|+++|+++ +.+|..|+||||+|+..+ + .+++++|+ +.| ++.+..
T Consensus 36 ~kd~-~G~TaLh~A~~~~~~~~~eivklLLs~GAdi-n~kD~~G~TPLh~Aa~~~~~~--~eIv~~Ll-~~~~~~~~~~~ 110 (672)
T PHA02730 36 HIDR-RGNNALHCYVSNKCDTDIKIVRLLLSRGVER-LCRNNEGLTPLGVYSKRKYVK--SQIVHLLI-SSYSNASNELT 110 (672)
T ss_pred hcCC-CCCcHHHHHHHcCCcCcHHHHHHHHhCCCCC-cccCCCCCChHHHHHHcCCCc--HHHHHHHH-hcCCCCCcccc
Confidence 7888 9999999999997 599999999999999 889999999999999977 7 89999999 664 556888
Q ss_pred CCCCCchhHHHHH
Q 042220 81 DVNGNTPLHVLAA 93 (255)
Q Consensus 81 d~~G~TpLh~A~~ 93 (255)
|+.+++|||.++.
T Consensus 111 ~~~~d~~l~~y~~ 123 (672)
T PHA02730 111 SNINDFDLYSYMS 123 (672)
T ss_pred cccCCchHHHHHH
Confidence 9889999999888
No 57
>PHA02917 ankyrin-like protein; Provisional
Probab=99.24 E-value=1.3e-11 Score=118.32 Aligned_cols=88 Identities=11% Similarity=-0.002 Sum_probs=74.3
Q ss_pred cceeecCCCCCcHHHHHH--HcChHHHHHHHHHhCCCcccccc---cCC-----------chHHHHHHH-----------
Q 042220 5 AACISDNDQKMTALLLAA--GRGHIRVVNEIISTCPDCCKQVD---ERG-----------WNLLHFAMA----------- 57 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa--~~g~~~~v~~Ll~~~~~~~~~~d---~~G-----------~t~Lh~A~~----------- 57 (255)
-++.+|+ +|+||||.++ ..|+.|++++|+++|+++ +.+| ..| +||||+|+.
T Consensus 128 din~~d~-~g~T~L~~~~a~~~~~~eivklLi~~Ga~v-n~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~ 205 (661)
T PHA02917 128 DLSVKCE-NHRSVIENYVMTDDPVPEIIDLFIENGCSV-LYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRA 205 (661)
T ss_pred CCCccCC-CCccHHHHHHHccCCCHHHHHHHHHcCCCc-cccccccccccccccccccccccHHHHHHhhcccccccccc
Confidence 4567888 9999999653 578999999999999988 4443 234 599999986
Q ss_pred hCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHHHhhhh
Q 042220 58 SSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLAAVLQK 97 (255)
Q Consensus 58 ~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~~~~~~ 97 (255)
+++ .+++++|+ +.|+++|.+|.+|+||||+|++.++.
T Consensus 206 ~~~--~eiv~~Li-~~Gadvn~~d~~G~TpLh~A~~~g~~ 242 (661)
T PHA02917 206 YVR--PEVVKCLI-NHGIKPSSIDKNYCTALQYYIKSSHI 242 (661)
T ss_pred cCc--HHHHHHHH-HCCCCcccCCCCCCcHHHHHHHcCCC
Confidence 457 89999999 88999999999999999999998764
No 58
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.24 E-value=8e-12 Score=105.03 Aligned_cols=84 Identities=26% Similarity=0.268 Sum_probs=76.3
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCC
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNG 84 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G 84 (255)
-+|..+. ...||||.|+..||.++++.|+++.+|+ +..++.|+|||||||..|. ..+.+-|+ .+|+.++..|++|
T Consensus 59 rvn~tnm-gddtplhlaaahghrdivqkll~~kadv-navnehgntplhyacfwgy--dqiaedli-~~ga~v~icnk~g 133 (448)
T KOG0195|consen 59 RVNSTNM-GDDTPLHLAAAHGHRDIVQKLLSRKADV-NAVNEHGNTPLHYACFWGY--DQIAEDLI-SCGAAVNICNKKG 133 (448)
T ss_pred ccccccC-CCCcchhhhhhcccHHHHHHHHHHhccc-chhhccCCCchhhhhhhcH--HHHHHHHH-hccceeeecccCC
Confidence 3556666 5679999999999999999999999999 8999999999999999999 88999888 8999999999999
Q ss_pred CchhHHHHH
Q 042220 85 NTPLHVLAA 93 (255)
Q Consensus 85 ~TpLh~A~~ 93 (255)
.|||..|..
T Consensus 134 ~tpldkakp 142 (448)
T KOG0195|consen 134 MTPLDKAKP 142 (448)
T ss_pred CCchhhhch
Confidence 999998753
No 59
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.21 E-value=2.6e-11 Score=85.42 Aligned_cols=74 Identities=18% Similarity=0.132 Sum_probs=58.4
Q ss_pred CCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHH
Q 042220 13 QKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHV 90 (255)
Q Consensus 13 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~ 90 (255)
.|++|||+||-.|+.+++++|+..++++ +.+|+.|-|||..|+..|| .+++++|+ +.|++...+..+|.+.+.-
T Consensus 33 ggR~plhyAAD~GQl~ilefli~iGA~i-~~kDKygITPLLsAvwEGH--~~cVklLL-~~GAdrt~~~PdG~~~~ea 106 (117)
T KOG4214|consen 33 GGRTPLHYAADYGQLSILEFLISIGANI-QDKDKYGITPLLSAVWEGH--RDCVKLLL-QNGADRTIHAPDGTALIEA 106 (117)
T ss_pred CCcccchHhhhcchHHHHHHHHHhcccc-CCccccCCcHHHHHHHHhh--HHHHHHHH-HcCcccceeCCCchhHHhh
Confidence 5788888888888888888888888887 7778888888888888888 88888887 6777777777777766544
No 60
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.21 E-value=2.9e-11 Score=99.21 Aligned_cols=88 Identities=25% Similarity=0.177 Sum_probs=79.2
Q ss_pred ceeecCCCCCcHHHHHHHcCh-----HHHHHHHHHhCC--CcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhh
Q 042220 6 ACISDNDQKMTALLLAAGRGH-----IRVVNEIISTCP--DCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLIN 78 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~-----~~~v~~Ll~~~~--~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~ 78 (255)
++.+|. +|.||||+|+..|+ .++++.|++.++ +....+|.+|+||||+|+..|+ .++++.++ +.+.+++
T Consensus 99 ~~~~~~-~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~--~~~~~~ll-~~~~~~~ 174 (235)
T COG0666 99 VNAKDA-DGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGD--ADIVELLL-EAGADPN 174 (235)
T ss_pred cccccC-CCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCc--hHHHHHHH-hcCCCCc
Confidence 378888 99999999999999 999999999999 5657789999999999999999 89999998 7899999
Q ss_pred ccCCCCCchhHHHHHhhhh
Q 042220 79 KQDVNGNTPLHVLAAVLQK 97 (255)
Q Consensus 79 ~~d~~G~TpLh~A~~~~~~ 97 (255)
.+|..|.|++++|+..++.
T Consensus 175 ~~~~~g~t~l~~a~~~~~~ 193 (235)
T COG0666 175 SRNSYGVTALDPAAKNGRI 193 (235)
T ss_pred ccccCCCcchhhhcccchH
Confidence 9999999999999988554
No 61
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.21 E-value=8.1e-12 Score=111.02 Aligned_cols=87 Identities=22% Similarity=0.257 Sum_probs=78.0
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
.+..|+ .|+|.||+||.+||.+++++|++.++|+ +.++.+|+|+||.+++.|+ .++++.|+ +.|+.++ +|.+|.
T Consensus 143 ~~Ianr-hGhTcLmIa~ykGh~~I~qyLle~gADv-n~ks~kGNTALH~caEsG~--vdivq~Ll-~~ga~i~-~d~~Gm 216 (615)
T KOG0508|consen 143 PEIANR-HGHTCLMIACYKGHVDIAQYLLEQGADV-NAKSYKGNTALHDCAESGS--VDIVQLLL-KHGAKID-VDGHGM 216 (615)
T ss_pred Cccccc-CCCeeEEeeeccCchHHHHHHHHhCCCc-chhcccCchHHHhhhhccc--HHHHHHHH-hCCceee-ecCCCC
Confidence 356688 9999999999999999999999999999 8899999999999999999 99999999 6666554 467799
Q ss_pred chhHHHHHhhhhc
Q 042220 86 TPLHVLAAVLQKE 98 (255)
Q Consensus 86 TpLh~A~~~~~~~ 98 (255)
|||..|+..|+.+
T Consensus 217 tPL~~Aa~tG~~~ 229 (615)
T KOG0508|consen 217 TPLLLAAVTGHTD 229 (615)
T ss_pred chHHHHhhhcchH
Confidence 9999999987754
No 62
>PHA02917 ankyrin-like protein; Provisional
Probab=99.21 E-value=3.2e-11 Score=115.62 Aligned_cols=83 Identities=19% Similarity=0.129 Sum_probs=74.0
Q ss_pred ceeecCCCCCcHHHHHHHcC-----------------------hHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCch
Q 042220 6 ACISDNDQKMTALLLAAGRG-----------------------HIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLF 62 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g-----------------------~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~ 62 (255)
++.+|+ +|+||||.|++.+ +.++++.|+++++++ +.+|..|+||||+|+..++
T Consensus 389 ~~~~~~-~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~GAdI-N~kd~~G~TpLh~Aa~~~~-- 464 (661)
T PHA02917 389 AVNHLD-DGEIPIGHLCKSNYGCYNFYTYTYKKGLCDMSYACPILSTINICLPYLKDI-NMIDKRGETLLHKAVRYNK-- 464 (661)
T ss_pred ccccCC-CCCChhHHHHHhcccchhhhhhhhhhccchhhhhhhhHHHHHHHHHCCCCC-CCCCCCCcCHHHHHHHcCC--
Confidence 345567 7999999987533 356789999999998 8899999999999999999
Q ss_pred HHHHHHHhhhhhhhhhccCCCCCchhHHHHH
Q 042220 63 QLHSRLRNRSVEMLINKQDVNGNTPLHVLAA 93 (255)
Q Consensus 63 ~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~~ 93 (255)
.+++++|+ +.|++++.+|..|+||||+|+.
T Consensus 465 ~~~v~~Ll-~~GAdin~~d~~G~T~L~~A~~ 494 (661)
T PHA02917 465 QSLVSLLL-ESGSDVNIRSNNGYTCIAIAIN 494 (661)
T ss_pred HHHHHHHH-HCcCCCCCCCCCCCCHHHHHHH
Confidence 99999999 8999999999999999999996
No 63
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.20 E-value=2.7e-11 Score=94.92 Aligned_cols=79 Identities=22% Similarity=0.143 Sum_probs=73.0
Q ss_pred HHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHHHhhh
Q 042220 17 ALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLAAVLQ 96 (255)
Q Consensus 17 pLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~~~~~ 96 (255)
-+.+|+..+..+.|+.|++..++..+.+|++|.||||-|+.+|+ .++++.|+ ..|++.+.+..+|+||||-|++..+
T Consensus 66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h--~div~~ll-~~gAn~~a~T~~GWTPLhSAckWnN 142 (228)
T KOG0512|consen 66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGH--LDIVHELL-LSGANKEAKTNEGWTPLHSACKWNN 142 (228)
T ss_pred HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCc--hHHHHHHH-HccCCcccccccCccchhhhhcccc
Confidence 36789999999999999999999989999999999999999999 99999998 7899999999999999999998744
Q ss_pred hc
Q 042220 97 KE 98 (255)
Q Consensus 97 ~~ 98 (255)
.+
T Consensus 143 ~~ 144 (228)
T KOG0512|consen 143 FE 144 (228)
T ss_pred hh
Confidence 43
No 64
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.18 E-value=3.1e-11 Score=117.75 Aligned_cols=79 Identities=25% Similarity=0.172 Sum_probs=72.0
Q ss_pred CCCcHHHHHHHcChHHHHHHHHHhCCCcccccc--------------cCCchHHHHHHHhCCchHHHHHHHhhhhhhhhh
Q 042220 13 QKMTALLLAAGRGHIRVVNEIISTCPDCCKQVD--------------ERGWNLLHFAMASSNLFQLHSRLRNRSVEMLIN 78 (255)
Q Consensus 13 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d--------------~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~ 78 (255)
.|.||||+|+.+|+.++++.|+++++++ +.++ ..|+||||.|+..++ .+++++|+ +.|+++|
T Consensus 127 ~G~TpLhlAa~~~~~eiVklLL~~GAdv-~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~--~~iv~lLl-~~gadin 202 (743)
T TIGR00870 127 PGITALHLAAHRQNYEIVKLLLERGASV-PARACGDFFVKSQGVDSFYHGESPLNAAACLGS--PSIVALLS-EDPADIL 202 (743)
T ss_pred CCCcHHHHHHHhCCHHHHHHHHhCCCCC-CcCcCCchhhcCCCCCcccccccHHHHHHHhCC--HHHHHHHh-cCCcchh
Confidence 6999999999999999999999999987 4332 369999999999999 99999998 7899999
Q ss_pred ccCCCCCchhHHHHHhh
Q 042220 79 KQDVNGNTPLHVLAAVL 95 (255)
Q Consensus 79 ~~d~~G~TpLh~A~~~~ 95 (255)
.+|..|+||||+|+..+
T Consensus 203 ~~d~~g~T~Lh~A~~~~ 219 (743)
T TIGR00870 203 TADSLGNTLLHLLVMEN 219 (743)
T ss_pred hHhhhhhHHHHHHHhhh
Confidence 99999999999999875
No 65
>PHA02795 ankyrin-like protein; Provisional
Probab=99.14 E-value=6.7e-11 Score=107.05 Aligned_cols=82 Identities=15% Similarity=-0.038 Sum_probs=51.7
Q ss_pred CCcHHHHHHHcChHHHHHHHHHhCCCccccc-----ccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchh
Q 042220 14 KMTALLLAAGRGHIRVVNEIISTCPDCCKQV-----DERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPL 88 (255)
Q Consensus 14 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~-----d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpL 88 (255)
+.||+|.|+.+|+.+++++|++++++..+.. +..|.+++|.|...++ .+++++|+ +.|+++|.+|.+|+|||
T Consensus 149 ~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~--~eIve~LI-s~GADIN~kD~~G~TpL 225 (437)
T PHA02795 149 CLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTV--LEIYKLCI-PYIEDINQLDAGGRTLL 225 (437)
T ss_pred CCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCH--HHHHHHHH-hCcCCcCcCCCCCCCHH
Confidence 3445555555555555555555543221211 1224555566666566 67777777 67889999999999999
Q ss_pred HHHHHhhhhc
Q 042220 89 HVLAAVLQKE 98 (255)
Q Consensus 89 h~A~~~~~~~ 98 (255)
|+|+..++.+
T Consensus 226 h~Aa~~g~~e 235 (437)
T PHA02795 226 YRAIYAGYID 235 (437)
T ss_pred HHHHHcCCHH
Confidence 9999887765
No 66
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.14 E-value=1.8e-10 Score=85.70 Aligned_cols=85 Identities=31% Similarity=0.365 Sum_probs=77.4
Q ss_pred eeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCc
Q 042220 7 CISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNT 86 (255)
Q Consensus 7 ~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~T 86 (255)
+.+|. .|.+|+|.|+..++.++++.|++.+++. +..+..|.||+|+|+..++ .+++++|+ +.+.+.+..|..|.|
T Consensus 34 ~~~~~-~g~~~l~~a~~~~~~~~~~~ll~~~~~~-~~~~~~~~~~l~~a~~~~~--~~~~~~L~-~~~~~~~~~~~~~~~ 108 (126)
T cd00204 34 NAKDN-DGRTPLHLAAKNGHLEIVKLLLEKGADV-NARDKDGNTPLHLAARNGN--LDVVKLLL-KHGADVNARDKDGRT 108 (126)
T ss_pred CccCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCc--HHHHHHHH-HcCCCCcccCCCCCC
Confidence 56777 8999999999999999999999999876 7788999999999999999 99999998 677889999999999
Q ss_pred hhHHHHHhhh
Q 042220 87 PLHVLAAVLQ 96 (255)
Q Consensus 87 pLh~A~~~~~ 96 (255)
|++.|....+
T Consensus 109 ~l~~~~~~~~ 118 (126)
T cd00204 109 PLHLAAKNGH 118 (126)
T ss_pred HHHHHHhcCC
Confidence 9999988743
No 67
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.14 E-value=8.5e-11 Score=113.04 Aligned_cols=78 Identities=22% Similarity=0.150 Sum_probs=72.6
Q ss_pred HHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHHHhhh
Q 042220 17 ALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLAAVLQ 96 (255)
Q Consensus 17 pLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~~~~~ 96 (255)
.|+.|+..|+.+.++.|++.++++ +.+|.+|+||||+|+.+|+ .+++++|+ +.|+++|.+|.+|+||||+|+..++
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadi-n~~d~~G~TpLh~Aa~~g~--~eiv~~LL-~~Gadvn~~d~~G~TpLh~A~~~g~ 160 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADP-NCRDYDGRTPLHIACANGH--VQVVRVLL-EFGADPTLLDKDGKTPLELAEENGF 160 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCcHHHHHHHCCC--HHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHCCc
Confidence 588999999999999999999998 8899999999999999999 99999999 7899999999999999999999865
Q ss_pred hc
Q 042220 97 KE 98 (255)
Q Consensus 97 ~~ 98 (255)
.+
T Consensus 161 ~~ 162 (664)
T PTZ00322 161 RE 162 (664)
T ss_pred HH
Confidence 44
No 68
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.12 E-value=7.1e-11 Score=76.38 Aligned_cols=47 Identities=36% Similarity=0.319 Sum_probs=38.4
Q ss_pred CchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHHHhhhh
Q 042220 48 GWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLAAVLQK 97 (255)
Q Consensus 48 G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~~~~~~ 97 (255)
|+||||+|++.|+ .+++++++ +.+.++|.+|.+|+||||+|++.++.
T Consensus 1 g~t~lh~A~~~g~--~~~~~~Ll-~~~~din~~d~~g~t~lh~A~~~g~~ 47 (54)
T PF13637_consen 1 GRTPLHWAARSGN--LEIVKLLL-EHGADINAQDEDGRTPLHYAAKNGNI 47 (54)
T ss_dssp SSBHHHHHHHTT---HHHHHHHH-HTTSGTT-B-TTS--HHHHHHHTT-H
T ss_pred CChHHHHHHHhCC--HHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHccCH
Confidence 7899999999999 99999999 66999999999999999999998664
No 69
>PHA02792 ankyrin-like protein; Provisional
Probab=99.07 E-value=2.5e-10 Score=107.20 Aligned_cols=83 Identities=13% Similarity=0.134 Sum_probs=65.8
Q ss_pred ceeecCCC--CCcHHHHHHHcChH---HHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhcc
Q 042220 6 ACISDNDQ--KMTALLLAAGRGHI---RVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQ 80 (255)
Q Consensus 6 v~~~d~~~--G~tpLh~Aa~~g~~---~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~ 80 (255)
++.+|+ + |.||||.|+..+.. ++++.++++++++ +.+|..|+||||+|+..++ .+++++|+ +.|++++.+
T Consensus 365 IN~kD~-~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADI-N~kD~~G~TPLh~Aa~~~n--~eivelLL-s~GADIN~k 439 (631)
T PHA02792 365 VVEDDD-NIINIMPLFPTLSIHESDVLSILKLCKPYIDDI-NKIDKHGRSILYYCIESHS--VSLVEWLI-DNGADINIT 439 (631)
T ss_pred hhhhcC-CCCChhHHHHHHHhccHhHHHHHHHHHhcCCcc-ccccccCcchHHHHHHcCC--HHHHHHHH-HCCCCCCCc
Confidence 355665 5 45888887766554 4577788888887 7788888999999988888 88888888 678888888
Q ss_pred CCCCCchhHHHHH
Q 042220 81 DVNGNTPLHVLAA 93 (255)
Q Consensus 81 d~~G~TpLh~A~~ 93 (255)
|..|+||||+|..
T Consensus 440 D~~G~TpL~~A~~ 452 (631)
T PHA02792 440 TKYGSTCIGICVI 452 (631)
T ss_pred CCCCCCHHHHHHH
Confidence 8889999988876
No 70
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.07 E-value=1.5e-10 Score=114.11 Aligned_cols=81 Identities=25% Similarity=0.289 Sum_probs=61.9
Q ss_pred CCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHHH
Q 042220 14 KMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLAA 93 (255)
Q Consensus 14 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~~ 93 (255)
|-+++|.|...++..+.+.+++++.++ +.++.+|.||||.|+.+|+ .+++++|+ +.|++++.+|+.|.||||.|+.
T Consensus 507 ~l~~lhla~~~~~v~~~~~l~~~ga~v-~~~~~r~~TpLh~A~~~g~--v~~VkfLL-e~gAdv~ak~~~G~TPLH~Aa~ 582 (1143)
T KOG4177|consen 507 GLTPLHLAADEDTVKVAKILLEHGANV-DLRTGRGYTPLHVAVHYGN--VDLVKFLL-EHGADVNAKDKLGYTPLHQAAQ 582 (1143)
T ss_pred ccchhhhhhhhhhHHHHHHHhhcCCce-ehhcccccchHHHHHhcCC--chHHHHhh-hCCccccccCCCCCChhhHHHH
Confidence 333444444444444444444444444 5678889999999999999 99999999 8999999999999999999999
Q ss_pred hhhhc
Q 042220 94 VLQKE 98 (255)
Q Consensus 94 ~~~~~ 98 (255)
.+|.+
T Consensus 583 ~G~~~ 587 (1143)
T KOG4177|consen 583 QGHND 587 (1143)
T ss_pred cChHH
Confidence 98765
No 71
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.06 E-value=3.4e-10 Score=95.17 Aligned_cols=90 Identities=23% Similarity=0.192 Sum_probs=83.9
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCC
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNG 84 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G 84 (255)
-+|.+|. .|+++|..|+.+|+.+.++.|++.++|++..++..+.||||.|+..|+ .++.+.++ +.|+.....|.-|
T Consensus 37 ~vn~~D~-sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn--~dvcrlll-daGa~~~~vNsvg 112 (396)
T KOG1710|consen 37 QVNQRDP-SGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGN--QDVCRLLL-DAGARMYLVNSVG 112 (396)
T ss_pred hhhccCC-CcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCC--chHHHHHH-hccCccccccchh
Confidence 4788999 999999999999999999999999999977888899999999999999 99999998 8899999999999
Q ss_pred CchhHHHHHhhhhc
Q 042220 85 NTPLHVLAAVLQKE 98 (255)
Q Consensus 85 ~TpLh~A~~~~~~~ 98 (255)
.|+-.+|+--||.+
T Consensus 113 rTAaqmAAFVG~H~ 126 (396)
T KOG1710|consen 113 RTAAQMAAFVGHHE 126 (396)
T ss_pred hhHHHHHHHhcchH
Confidence 99999999887765
No 72
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.06 E-value=1.8e-10 Score=103.90 Aligned_cols=139 Identities=15% Similarity=0.074 Sum_probs=112.4
Q ss_pred eeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCc
Q 042220 7 CISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNT 86 (255)
Q Consensus 7 ~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~T 86 (255)
+..+. +|.|+||.+|.-.+.+++++|+++++++ +..|..||||||.|+..|+ ..++++++ ..|+++...|.+|+.
T Consensus 67 ~~~n~-DglTalhq~~id~~~e~v~~l~e~ga~V-n~~d~e~wtPlhaaascg~--~~i~~~li-~~gA~~~avNsdg~~ 141 (527)
T KOG0505|consen 67 NLCNV-DGLTALHQACIDDNLEMVKFLVENGANV-NAQDNEGWTPLHAAASCGY--LNIVEYLI-QHGANLLAVNSDGNM 141 (527)
T ss_pred cccCC-ccchhHHHHHhcccHHHHHHHHHhcCCc-cccccccCCcchhhccccc--HHHHHHHH-HhhhhhhhccCCCCC
Confidence 66677 9999999999999999999999999999 8999999999999999999 99999999 899999999999999
Q ss_pred hhHHHHHhhhhc-----------c--------------------chhh-hHHHHhhccchHHHHHHHHHHHHHhccCCCC
Q 042220 87 PLHVLAAVLQKE-----------K--------------------TAVE-EGEIKELKPRHTIVATLIATVTFAAGFTLPG 134 (255)
Q Consensus 87 pLh~A~~~~~~~-----------~--------------------~~~~-~~~~~~~~~~~~vvA~Liatvtf~a~l~~PG 134 (255)
|+.++....-.+ + ++|. .++....+.+.++||.--+....++-+..-|
T Consensus 142 P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag 221 (527)
T KOG0505|consen 142 PYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAG 221 (527)
T ss_pred ccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhc
Confidence 998875430000 0 0111 0222223577888888888778888888888
Q ss_pred CccCCCCCCCcccccc
Q 042220 135 GYWGKEGPIPGTSILI 150 (255)
Q Consensus 135 g~~~~~~~~~g~~~~~ 150 (255)
+..+.++.++.+|+..
T Consensus 222 ~~~~~~D~dgWtPlHA 237 (527)
T KOG0505|consen 222 YSVNIKDYDGWTPLHA 237 (527)
T ss_pred cCcccccccCCCcccH
Confidence 8877778888999874
No 73
>PHA02730 ankyrin-like protein; Provisional
Probab=99.04 E-value=4.4e-10 Score=106.50 Aligned_cols=84 Identities=15% Similarity=0.052 Sum_probs=73.0
Q ss_pred ceeecCCCCCcHHHH---HHHcC---------hHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhh
Q 042220 6 ACISDNDQKMTALLL---AAGRG---------HIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSV 73 (255)
Q Consensus 6 v~~~d~~~G~tpLh~---Aa~~g---------~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~ 73 (255)
++.+|. +|+||||. |...+ ..++++.|+++++++ +.+|..|+||||+|+..++ .+++++|+ +.
T Consensus 410 IN~kd~-~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADI-NakD~~G~TPLh~Aa~~~~--~eive~LI-~~ 484 (672)
T PHA02730 410 INHVSN-NGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDDI-DMIDNENKTLLYYAVDVNN--IQFARRLL-EY 484 (672)
T ss_pred cccccc-CCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccch-hccCCCCCCHHHHHHHhCC--HHHHHHHH-HC
Confidence 678888 99999994 33332 235799999999998 8999999999999999999 99999999 88
Q ss_pred hhhhhccCC-CCCchhHHHHHh
Q 042220 74 EMLINKQDV-NGNTPLHVLAAV 94 (255)
Q Consensus 74 ~~~i~~~d~-~G~TpLh~A~~~ 94 (255)
|+++|.+|. .|+||||+|+..
T Consensus 485 GAdIN~~d~~~g~TaL~~Aa~~ 506 (672)
T PHA02730 485 GASVNTTSRSIINTAIQKSSYR 506 (672)
T ss_pred CCCCCCCCCcCCcCHHHHHHHh
Confidence 999999997 599999999874
No 74
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.04 E-value=1.4e-10 Score=108.27 Aligned_cols=91 Identities=20% Similarity=0.184 Sum_probs=83.5
Q ss_pred CCcceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCC
Q 042220 3 KSAACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDV 82 (255)
Q Consensus 3 ~~~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~ 82 (255)
+...|.+|- +|.|+||.|+.+|+.++++.|+++.+-. +..|.+|.+|||+|+++|+ .+.+++++ ..+..+|..+.
T Consensus 39 sds~n~qd~-~gfTalhha~Lng~~~is~llle~ea~l-dl~d~kg~~plhlaaw~g~--~e~vkmll-~q~d~~na~~~ 113 (854)
T KOG0507|consen 39 SDSHNLQDY-SGFTLLHHAVLNGQNQISKLLLDYEALL-DLCDTKGILPLHLAAWNGN--LEIVKMLL-LQTDILNAVNI 113 (854)
T ss_pred CccccccCc-cchhHHHHHHhcCchHHHHHHhcchhhh-hhhhccCcceEEehhhcCc--chHHHHHH-hcccCCCcccc
Confidence 455678888 9999999999999999999999998877 7889999999999999999 99999998 66788999999
Q ss_pred CCCchhHHHHHhhhhc
Q 042220 83 NGNTPLHVLAAVLQKE 98 (255)
Q Consensus 83 ~G~TpLh~A~~~~~~~ 98 (255)
+|.||||.|++++|.+
T Consensus 114 e~~tplhlaaqhgh~d 129 (854)
T KOG0507|consen 114 ENETPLHLAAQHGHLE 129 (854)
T ss_pred cCcCccchhhhhcchH
Confidence 9999999999998876
No 75
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.03 E-value=1.6e-08 Score=95.42 Aligned_cols=83 Identities=20% Similarity=0.155 Sum_probs=75.8
Q ss_pred CCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhh--hhccCCCCCchhH
Q 042220 12 DQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEML--INKQDVNGNTPLH 89 (255)
Q Consensus 12 ~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~--i~~~d~~G~TpLh 89 (255)
+.|+.||..||.-++.|++++|+++++|+ +.+|.+|+|.||.-+.+-. .++.+.++ +.|++ ...+|++|-|||.
T Consensus 238 YfGEyPLSfAAC~nq~eivrlLl~~gAd~-~aqDS~GNTVLH~lVi~~~--~~My~~~L-~~ga~~l~~v~N~qgLTPLt 313 (782)
T KOG3676|consen 238 YFGEYPLSFAACTNQPEIVRLLLAHGADP-NAQDSNGNTVLHMLVIHFV--TEMYDLAL-ELGANALEHVRNNQGLTPLT 313 (782)
T ss_pred eeccCchHHHHHcCCHHHHHHHHhcCCCC-CccccCCChHHHHHHHHHH--HHHHHHHH-hcCCCccccccccCCCChHH
Confidence 36899999999999999999999999999 8999999999999999988 89999988 77887 8899999999999
Q ss_pred HHHHhhhhc
Q 042220 90 VLAAVLQKE 98 (255)
Q Consensus 90 ~A~~~~~~~ 98 (255)
+|++.|..+
T Consensus 314 LAaklGk~e 322 (782)
T KOG3676|consen 314 LAAKLGKKE 322 (782)
T ss_pred HHHHhhhHH
Confidence 999985543
No 76
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.02 E-value=4.6e-10 Score=107.99 Aligned_cols=85 Identities=19% Similarity=0.206 Sum_probs=76.1
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhh-------hhhh
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSV-------EMLI 77 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~-------~~~i 77 (255)
.++.+|+ +|+||||+|+.+|+.++++.|++.++++ +.+|.+|+||||+|+..++ .+++++|+ +. +++.
T Consensus 107 din~~d~-~G~TpLh~Aa~~g~~eiv~~LL~~Gadv-n~~d~~G~TpLh~A~~~g~--~~iv~~Ll-~~~~~~~~~ga~~ 181 (664)
T PTZ00322 107 DPNCRDY-DGRTPLHIACANGHVQVVRVLLEFGADP-TLLDKDGKTPLELAEENGF--REVVQLLS-RHSQCHFELGANA 181 (664)
T ss_pred CCCCcCC-CCCcHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHCCc--HHHHHHHH-hCCCcccccCCCC
Confidence 3577888 9999999999999999999999999998 8899999999999999999 99999998 45 7888
Q ss_pred hccCCCCCchhHHHHHh
Q 042220 78 NKQDVNGNTPLHVLAAV 94 (255)
Q Consensus 78 ~~~d~~G~TpLh~A~~~ 94 (255)
+.++..|++|+..+...
T Consensus 182 ~~~~~~g~~~~~~~~~~ 198 (664)
T PTZ00322 182 KPDSFTGKPPSLEDSPI 198 (664)
T ss_pred CccccCCCCccchhhhh
Confidence 88888899888776543
No 77
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.02 E-value=4.7e-10 Score=79.12 Aligned_cols=78 Identities=18% Similarity=0.156 Sum_probs=69.3
Q ss_pred cHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHHHhh
Q 042220 16 TALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLAAVL 95 (255)
Q Consensus 16 tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~~~~ 95 (255)
--+.++.++|..+-++..+..+-++.+. ..||+|||+|+-+|+ .+++++++ ..|++++.+|+.|-|||--|+..|
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~--~ggR~plhyAAD~GQ--l~ilefli-~iGA~i~~kDKygITPLLsAvwEG 78 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNEGLNVNEI--YGGRTPLHYAADYGQ--LSILEFLI-SIGANIQDKDKYGITPLLSAVWEG 78 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHccccHHHH--hCCcccchHhhhcch--HHHHHHHH-HhccccCCccccCCcHHHHHHHHh
Confidence 3567899999999999999888666332 389999999999999 99999999 899999999999999999999998
Q ss_pred hhc
Q 042220 96 QKE 98 (255)
Q Consensus 96 ~~~ 98 (255)
|.+
T Consensus 79 H~~ 81 (117)
T KOG4214|consen 79 HRD 81 (117)
T ss_pred hHH
Confidence 875
No 78
>PHA02792 ankyrin-like protein; Provisional
Probab=99.02 E-value=2.6e-10 Score=107.04 Aligned_cols=87 Identities=13% Similarity=0.013 Sum_probs=76.4
Q ss_pred cceeecCCCCCcHHHHHHH-cChHHHHHHHHHhCCCcc-----------------------------------cccccCC
Q 042220 5 AACISDNDQKMTALLLAAG-RGHIRVVNEIISTCPDCC-----------------------------------KQVDERG 48 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~-~g~~~~v~~Ll~~~~~~~-----------------------------------~~~d~~G 48 (255)
-+|.+|+ .|.+|+|+|+. +|+.|++++|+++|++.. +.+|+.|
T Consensus 97 dvN~~~n-~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g 175 (631)
T PHA02792 97 EINSIKN-GINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMG 175 (631)
T ss_pred CcccccC-CCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccccccccccCCCCC
Confidence 4567888 89999999966 699999999999997621 2356779
Q ss_pred chHHHHHHHhC-------CchHHHHHHHhhhhhhhhhccCCCCCchhHHHHHhh
Q 042220 49 WNLLHFAMASS-------NLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLAAVL 95 (255)
Q Consensus 49 ~t~Lh~A~~~g-------~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~~~~ 95 (255)
+||||+|+.++ + .+++++|+ +.|++++.+|.+|.||||+|+.+.
T Consensus 176 ~t~L~~~i~~~s~~~~~~~--~~v~k~Li-~~g~~~~~~d~~g~t~l~~~~~~~ 226 (631)
T PHA02792 176 KTVLYYYIITRSQDGYATS--LDVINYLI-SHEKEMRYYTYREHTTLYYYVDKC 226 (631)
T ss_pred CchHHHHHhhCCcccccCC--HHHHHHHH-hCCCCcCccCCCCChHHHHHHHcc
Confidence 99999999999 6 89999999 899999999999999999999875
No 79
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.01 E-value=1.8e-09 Score=105.50 Aligned_cols=113 Identities=13% Similarity=0.095 Sum_probs=78.9
Q ss_pred cceeecCCCCCcHHH-HHHHcChHHHHHHHHHhCC--Cc--------------------------c-------------c
Q 042220 5 AACISDNDQKMTALL-LAAGRGHIRVVNEIISTCP--DC--------------------------C-------------K 42 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh-~Aa~~g~~~~v~~Ll~~~~--~~--------------------------~-------------~ 42 (255)
.+|..|. .|+|||| .|+.+++.++++.|++++. .. . .
T Consensus 44 ~in~~d~-~G~t~Lh~~A~~~~~~eiv~lLl~~g~~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~ 122 (743)
T TIGR00870 44 NINCPDR-LGRSALFVAAIENENLELTELLLNLSCRGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYT 122 (743)
T ss_pred CCCCcCc-cchhHHHHHHHhcChHHHHHHHHhCCCCCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccc
Confidence 4566677 8888888 7777778888888877662 00 0 0
Q ss_pred ccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccC--------------CCCCchhHHHHHhhhhc------cchh
Q 042220 43 QVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQD--------------VNGNTPLHVLAAVLQKE------KTAV 102 (255)
Q Consensus 43 ~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d--------------~~G~TpLh~A~~~~~~~------~~~~ 102 (255)
..+..|+||||+|+.+|+ .++++.|+ +.|++++.++ .+|.||||.|+..++.+ ++..
T Consensus 123 ~~~~~G~TpLhlAa~~~~--~eiVklLL-~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~ga 199 (743)
T TIGR00870 123 SEFTPGITALHLAAHRQN--YEIVKLLL-ERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPA 199 (743)
T ss_pred cccCCCCcHHHHHHHhCC--HHHHHHHH-hCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCc
Confidence 012358999999999999 99999999 6788888653 35899999999887665 2222
Q ss_pred hhHHHHhhccchHHHHHHH
Q 042220 103 EEGEIKELKPRHTIVATLI 121 (255)
Q Consensus 103 ~~~~~~~~~~~~~vvA~Li 121 (255)
+.....+.+++.++.|+.-
T Consensus 200 din~~d~~g~T~Lh~A~~~ 218 (743)
T TIGR00870 200 DILTADSLGNTLLHLLVME 218 (743)
T ss_pred chhhHhhhhhHHHHHHHhh
Confidence 2234445567777766655
No 80
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=98.98 E-value=3.7e-10 Score=91.68 Aligned_cols=81 Identities=17% Similarity=0.135 Sum_probs=76.7
Q ss_pred CCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHH
Q 042220 13 QKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLA 92 (255)
Q Consensus 13 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~ 92 (255)
+..++|..|++.|..++++.|+.+++|+ +.-|.+|-|||-+|++.++ .++++.|+ +.|++++..|..|++++.+|+
T Consensus 192 ~resALsLAt~ggytdiV~lLL~r~vdV-NvyDwNGgTpLlyAvrgnh--vkcve~Ll-~sGAd~t~e~dsGy~~mdlAV 267 (296)
T KOG0502|consen 192 YRESALSLATRGGYTDIVELLLTREVDV-NVYDWNGGTPLLYAVRGNH--VKCVESLL-NSGADVTQEDDSGYWIMDLAV 267 (296)
T ss_pred hhhhhHhHHhcCChHHHHHHHHhcCCCc-ceeccCCCceeeeeecCCh--HHHHHHHH-hcCCCcccccccCCcHHHHHH
Confidence 5679999999999999999999999999 8999999999999999999 99999999 899999999999999999999
Q ss_pred Hhhhh
Q 042220 93 AVLQK 97 (255)
Q Consensus 93 ~~~~~ 97 (255)
..|..
T Consensus 268 alGyr 272 (296)
T KOG0502|consen 268 ALGYR 272 (296)
T ss_pred HhhhH
Confidence 88553
No 81
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.95 E-value=1e-09 Score=103.45 Aligned_cols=83 Identities=28% Similarity=0.226 Sum_probs=72.6
Q ss_pred eecCCCCCcHHHHHHHcChHHHHHHHHHhCCCccccc---------c--------------cCCchHHHHHHHhCCchHH
Q 042220 8 ISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQV---------D--------------ERGWNLLHFAMASSNLFQL 64 (255)
Q Consensus 8 ~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~---------d--------------~~G~t~Lh~A~~~g~~~~~ 64 (255)
..|.+.|.||||+|..+.+.+.++.|++.++|+ +.+ | ..|+.||..|+..++ .+
T Consensus 178 ~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV-~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq--~e 254 (782)
T KOG3676|consen 178 TSEEYYGQSALHIAIVNRDAELVRLLLAAGADV-HARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQ--PE 254 (782)
T ss_pred hhHhhcCcchHHHHHHhccHHHHHHHHHcCCch-hhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCC--HH
Confidence 344468999999999999999999999999987 331 2 247889999999999 99
Q ss_pred HHHHHhhhhhhhhhccCCCCCchhHHHHHh
Q 042220 65 HSRLRNRSVEMLINKQDVNGNTPLHVLAAV 94 (255)
Q Consensus 65 ~~~~Ll~~~~~~i~~~d~~G~TpLh~A~~~ 94 (255)
++++|+ ++|+|+|++|.+|||.||..+.+
T Consensus 255 ivrlLl-~~gAd~~aqDS~GNTVLH~lVi~ 283 (782)
T KOG3676|consen 255 IVRLLL-AHGADPNAQDSNGNTVLHMLVIH 283 (782)
T ss_pred HHHHHH-hcCCCCCccccCCChHHHHHHHH
Confidence 999999 79999999999999999998765
No 82
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=98.90 E-value=1.4e-09 Score=97.99 Aligned_cols=71 Identities=28% Similarity=0.335 Sum_probs=43.8
Q ss_pred HHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHHHh
Q 042220 20 LAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLAAV 94 (255)
Q Consensus 20 ~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~~~ 94 (255)
-|+..|..++|+..+..-.|. .+.+..|-|+||-|+..|| .+++++|+ +.|+++|..|.+|+||||.|+..
T Consensus 556 DaaLeGEldlVq~~i~ev~Dp-SqpNdEGITaLHNAiCagh--yeIVkFLi-~~ganVNa~DSdGWTPLHCAASC 626 (752)
T KOG0515|consen 556 DAALEGELDLVQRIIYEVTDP-SQPNDEGITALHNAICAGH--YEIVKFLI-EFGANVNAADSDGWTPLHCAASC 626 (752)
T ss_pred hhhhcchHHHHHHHHHhhcCC-CCCCccchhHHhhhhhcch--hHHHHHHH-hcCCcccCccCCCCchhhhhhhc
Confidence 355566666666666555555 4555566666666666666 66666666 56666666666666666666554
No 83
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=98.87 E-value=2.1e-09 Score=97.04 Aligned_cols=81 Identities=23% Similarity=0.246 Sum_probs=75.7
Q ss_pred eecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCch
Q 042220 8 ISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTP 87 (255)
Q Consensus 8 ~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~Tp 87 (255)
.++. +|.|.||.|+.+|..++.+.|++.+.++ +.+|.+||||||.|+..|+ .+++++|+ +.|++++.++..|.||
T Consensus 193 ~~~~-rG~T~lHvAaa~Gy~e~~~lLl~ag~~~-~~~D~dgWtPlHAAA~Wg~--~~~~elL~-~~ga~~d~~t~~g~~p 267 (527)
T KOG0505|consen 193 ARHA-RGATALHVAAANGYTEVAALLLQAGYSV-NIKDYDGWTPLHAAAHWGQ--EDACELLV-EHGADMDAKTKMGETP 267 (527)
T ss_pred cccc-ccchHHHHHHhhhHHHHHHHHHHhccCc-ccccccCCCcccHHHHhhh--HhHHHHHH-HhhcccchhhhcCCCC
Confidence 4455 6999999999999999999999999998 8999999999999999999 99999887 8999999999999999
Q ss_pred hHHHHH
Q 042220 88 LHVLAA 93 (255)
Q Consensus 88 Lh~A~~ 93 (255)
+.+|..
T Consensus 268 ~dv~de 273 (527)
T KOG0505|consen 268 LDVADE 273 (527)
T ss_pred ccchhh
Confidence 999876
No 84
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.87 E-value=1e-09 Score=103.38 Aligned_cols=86 Identities=27% Similarity=0.249 Sum_probs=79.6
Q ss_pred CcceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCccccccc-CCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCC
Q 042220 4 SAACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDE-RGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDV 82 (255)
Q Consensus 4 ~~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~-~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~ 82 (255)
+.+|++|. .|+|+||+++..|..+++++|+++|.++ ..+|+ .|+||||-|..+|+ .+++-.|+ +.|..+..+|+
T Consensus 43 n~anikD~-~GR~alH~~~S~~k~~~l~wLlqhGidv-~vqD~ESG~taLHRaiyyG~--idca~lLL-~~g~SL~i~Dk 117 (1267)
T KOG0783|consen 43 NLANIKDR-YGRTALHIAVSENKNSFLRWLLQHGIDV-FVQDEESGYTALHRAIYYGN--IDCASLLL-SKGRSLRIKDK 117 (1267)
T ss_pred hhhhHHHh-hccceeeeeeccchhHHHHHHHhcCcee-eeccccccchHhhHhhhhch--HHHHHHHH-hcCCceEEecc
Confidence 45789999 9999999999999999999999999998 66675 59999999999999 99999998 88999999999
Q ss_pred CCCchhHHHHHh
Q 042220 83 NGNTPLHVLAAV 94 (255)
Q Consensus 83 ~G~TpLh~A~~~ 94 (255)
+|..||..-.+-
T Consensus 118 eglsplq~~~r~ 129 (1267)
T KOG0783|consen 118 EGLSPLQFLSRV 129 (1267)
T ss_pred cCCCHHHHHhhc
Confidence 999999998883
No 85
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=98.85 E-value=1.5e-09 Score=101.52 Aligned_cols=91 Identities=15% Similarity=0.076 Sum_probs=81.7
Q ss_pred CCcceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCC
Q 042220 3 KSAACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDV 82 (255)
Q Consensus 3 ~~~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~ 82 (255)
...+.++|. .|.+|||+|++.|+.|+++.++.+.... +..+..|.||||.|+++|| .+.+.+|+ +.+++.-.+|+
T Consensus 72 ea~ldl~d~-kg~~plhlaaw~g~~e~vkmll~q~d~~-na~~~e~~tplhlaaqhgh--~dvv~~Ll-~~~adp~i~nn 146 (854)
T KOG0507|consen 72 EALLDLCDT-KGILPLHLAAWNGNLEIVKMLLLQTDIL-NAVNIENETPLHLAAQHGH--LEVVFYLL-KKNADPFIRNN 146 (854)
T ss_pred hhhhhhhhc-cCcceEEehhhcCcchHHHHHHhcccCC-CcccccCcCccchhhhhcc--hHHHHHHH-hcCCCccccCc
Confidence 345667788 9999999999999999999999998444 8889999999999999999 99999999 88999999999
Q ss_pred CCCchhHHHHHhhhhc
Q 042220 83 NGNTPLHVLAAVLQKE 98 (255)
Q Consensus 83 ~G~TpLh~A~~~~~~~ 98 (255)
.+.|+|.+|++.|..+
T Consensus 147 s~~t~ldlA~qfgr~~ 162 (854)
T KOG0507|consen 147 SKETVLDLASRFGRAE 162 (854)
T ss_pred ccccHHHHHHHhhhhH
Confidence 9999999999985543
No 86
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.83 E-value=1.2e-08 Score=83.58 Aligned_cols=87 Identities=26% Similarity=0.247 Sum_probs=75.6
Q ss_pred eecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCC---chHHHHHHHhhhhhh---hhhccC
Q 042220 8 ISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSN---LFQLHSRLRNRSVEM---LINKQD 81 (255)
Q Consensus 8 ~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~---~~~~~~~~Ll~~~~~---~i~~~d 81 (255)
..+. .+.+++|.++..+..+++++++..+.+. +.+|..|.||||+|+..++ ...++++.|+ +.|. ..+.+|
T Consensus 68 ~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll-~~g~~~~~~~~~~ 144 (235)
T COG0666 68 ARDL-DGRLPLHSAASKGDDKIVKLLLASGADV-NAKDADGDTPLHLAALNGNPPEGNIEVAKLLL-EAGADLDVNNLRD 144 (235)
T ss_pred cCCc-cccCHHHHHHHcCcHHHHHHHHHcCCCc-ccccCCCCcHHHHHHhcCCcccchHHHHHHHH-HcCCCCCCccccC
Confidence 3444 6899999999999999999999999999 8999999999999999987 2247889998 6777 677789
Q ss_pred CCCCchhHHHHHhhhh
Q 042220 82 VNGNTPLHVLAAVLQK 97 (255)
Q Consensus 82 ~~G~TpLh~A~~~~~~ 97 (255)
.+|+||||+|+..++.
T Consensus 145 ~~g~tpl~~A~~~~~~ 160 (235)
T COG0666 145 EDGNTPLHWAALNGDA 160 (235)
T ss_pred CCCCchhHHHHHcCch
Confidence 9999999999998543
No 87
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=98.70 E-value=5.8e-08 Score=87.76 Aligned_cols=78 Identities=21% Similarity=0.232 Sum_probs=66.2
Q ss_pred eecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhc-cCCCCCc
Q 042220 8 ISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINK-QDVNGNT 86 (255)
Q Consensus 8 ~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~-~d~~G~T 86 (255)
..|+ +|-|+||-|+..||.++|++|++.+.++ +..|.+||||||+|+..++ ..+++.|. +.|+.+-+ .=.++.|
T Consensus 578 qpNd-EGITaLHNAiCaghyeIVkFLi~~ganV-Na~DSdGWTPLHCAASCNn--v~~ckqLV-e~GaavfAsTlSDmeT 652 (752)
T KOG0515|consen 578 QPND-EGITALHNAICAGHYEIVKFLIEFGANV-NAADSDGWTPLHCAASCNN--VPMCKQLV-ESGAAVFASTLSDMET 652 (752)
T ss_pred CCCc-cchhHHhhhhhcchhHHHHHHHhcCCcc-cCccCCCCchhhhhhhcCc--hHHHHHHH-hccceEEeeecccccc
Confidence 4456 8999999999999999999999999999 8999999999999999999 99999999 56655543 3456777
Q ss_pred hhHH
Q 042220 87 PLHV 90 (255)
Q Consensus 87 pLh~ 90 (255)
+..-
T Consensus 653 a~eK 656 (752)
T KOG0515|consen 653 AAEK 656 (752)
T ss_pred hhhh
Confidence 7443
No 88
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.69 E-value=1.2e-08 Score=91.05 Aligned_cols=83 Identities=19% Similarity=0.197 Sum_probs=77.3
Q ss_pred CCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHH
Q 042220 13 QKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLA 92 (255)
Q Consensus 13 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~ 92 (255)
++..++++|++.|+...++.+.-.+.|. +.+|.+.||+||+|+..|+ .+++++|++..+.+.+.+|+.|+|||.-|.
T Consensus 505 ~~~i~~~~aa~~GD~~alrRf~l~g~D~-~~~DyD~RTaLHvAAaEG~--v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~ 581 (622)
T KOG0506|consen 505 DTVINVMYAAKNGDLSALRRFALQGMDL-ETKDYDDRTALHVAAAEGH--VEVVKFLLNACKVDPDPKDRWGRTPLDDAK 581 (622)
T ss_pred cchhhhhhhhhcCCHHHHHHHHHhcccc-cccccccchhheeecccCc--eeHHHHHHHHHcCCCChhhccCCCcchHhH
Confidence 5677899999999999999999999998 9999999999999999999 999999998889999999999999999999
Q ss_pred Hhhhhc
Q 042220 93 AVLQKE 98 (255)
Q Consensus 93 ~~~~~~ 98 (255)
..+|.+
T Consensus 582 ~F~h~~ 587 (622)
T KOG0506|consen 582 HFKHKE 587 (622)
T ss_pred hcCcHH
Confidence 886654
No 89
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.62 E-value=6.6e-08 Score=86.72 Aligned_cols=79 Identities=20% Similarity=0.170 Sum_probs=71.1
Q ss_pred HHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHHHhhh
Q 042220 17 ALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLAAVLQ 96 (255)
Q Consensus 17 pLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~~~~~ 96 (255)
-||-.++.|+.|..-.|+..|++.+..--+.|.||||+|++.|+ ...+++|. -.|++++..|.+|.||+.+|-..||
T Consensus 136 QLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq--~~Q~ElL~-vYGAD~~a~d~~GmtP~~~AR~~gH 212 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQ--ILQAELLA-VYGADPGAQDSSGMTPVDYARQGGH 212 (669)
T ss_pred HHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccc--hhhhhHHh-hccCCCCCCCCCCCcHHHHHHhcCc
Confidence 48999999999999999999999955555679999999999999 88899887 7999999999999999999998877
Q ss_pred hc
Q 042220 97 KE 98 (255)
Q Consensus 97 ~~ 98 (255)
.+
T Consensus 213 ~~ 214 (669)
T KOG0818|consen 213 HE 214 (669)
T ss_pred hH
Confidence 54
No 90
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.58 E-value=7.7e-08 Score=55.49 Aligned_cols=32 Identities=31% Similarity=0.374 Sum_probs=22.3
Q ss_pred CCCcHHHHHHHcChHHHHHHHHHhCCCcccccc
Q 042220 13 QKMTALLLAAGRGHIRVVNEIISTCPDCCKQVD 45 (255)
Q Consensus 13 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d 45 (255)
+|+||||+|+++|+.++++.|+++++++ +.+|
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~-~~~d 32 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADI-NARD 32 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCT-TCBC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCC-CCCC
Confidence 4677777777777777777777777766 4444
No 91
>PF13606 Ank_3: Ankyrin repeat
Probab=98.58 E-value=7e-08 Score=54.41 Aligned_cols=28 Identities=32% Similarity=0.443 Sum_probs=23.6
Q ss_pred CCCcHHHHHHHcChHHHHHHHHHhCCCc
Q 042220 13 QKMTALLLAAGRGHIRVVNEIISTCPDC 40 (255)
Q Consensus 13 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~ 40 (255)
+|+||||+|++.|+.|++++|+++++|+
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadv 28 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADV 28 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence 4788888888888888888888888776
No 92
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.46 E-value=3.9e-07 Score=77.03 Aligned_cols=81 Identities=22% Similarity=0.176 Sum_probs=72.8
Q ss_pred CCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhc-cCCCCCchhHHHH
Q 042220 14 KMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINK-QDVNGNTPLHVLA 92 (255)
Q Consensus 14 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~-~d~~G~TpLh~A~ 92 (255)
-..||.-+..+|..+-...|++.-.++ +.+|.+|.++|..|+..|+ .++++.++ +.|+++|. ++..+.||||.|+
T Consensus 12 ~~~~Lle~i~Kndt~~a~~LLs~vr~v-n~~D~sGMs~LahAaykGn--l~~v~lll-~~gaDvN~~qhg~~YTpLmFAA 87 (396)
T KOG1710|consen 12 PKSPLLEAIDKNDTEAALALLSTVRQV-NQRDPSGMSVLAHAAYKGN--LTLVELLL-ELGADVNDKQHGTLYTPLMFAA 87 (396)
T ss_pred hhhHHHHHHccCcHHHHHHHHHHhhhh-hccCCCcccHHHHHHhcCc--HHHHHHHH-HhCCCcCcccccccccHHHHHH
Confidence 468999999999999999999886666 8899999999999999999 99999999 89999995 5778999999999
Q ss_pred Hhhhhc
Q 042220 93 AVLQKE 98 (255)
Q Consensus 93 ~~~~~~ 98 (255)
..|+.+
T Consensus 88 LSGn~d 93 (396)
T KOG1710|consen 88 LSGNQD 93 (396)
T ss_pred HcCCch
Confidence 997765
No 93
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.45 E-value=2.1e-07 Score=53.66 Aligned_cols=33 Identities=24% Similarity=0.174 Sum_probs=30.8
Q ss_pred CCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCC
Q 042220 47 RGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDV 82 (255)
Q Consensus 47 ~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~ 82 (255)
+|+||||+|+++|+ .+++++|+ +.|++++.+|+
T Consensus 1 dG~TpLh~A~~~~~--~~~v~~Ll-~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGH--PDIVKLLL-KHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTC--HHHHHHHH-HTTSCTTCBCT
T ss_pred CcccHHHHHHHHHH--HHHHHHHH-HCcCCCCCCCC
Confidence 59999999999999 99999999 79999999885
No 94
>PF13606 Ank_3: Ankyrin repeat
Probab=98.38 E-value=3e-07 Score=51.79 Aligned_cols=30 Identities=20% Similarity=0.116 Sum_probs=27.0
Q ss_pred CCchHHHHHHHhCCchHHHHHHHhhhhhhhhhc
Q 042220 47 RGWNLLHFAMASSNLFQLHSRLRNRSVEMLINK 79 (255)
Q Consensus 47 ~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~ 79 (255)
+|+||||+|+++|+ .+++++|+ +.|+++|.
T Consensus 1 ~G~T~Lh~A~~~g~--~e~v~~Ll-~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGN--IEIVKYLL-EHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCC--HHHHHHHH-HcCCCCCC
Confidence 59999999999999 99999999 67888763
No 95
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.35 E-value=6.6e-07 Score=81.70 Aligned_cols=84 Identities=25% Similarity=0.275 Sum_probs=73.5
Q ss_pred eeecCCCCCcHHHHHHHcChHHHHHHHHHhCCC-cccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 7 CISDNDQKMTALLLAAGRGHIRVVNEIISTCPD-CCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 7 ~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~-~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
..++. +..+.||+|++.|+-|++++++.++|. +.+..|++|.|+||-|+..++ ..+.+++. +.|+.+...|..|.
T Consensus 893 l~~~~-~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~--r~vc~~lv-dagasl~ktd~kg~ 968 (1004)
T KOG0782|consen 893 LIQGP-DHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRN--RAVCQLLV-DAGASLRKTDSKGK 968 (1004)
T ss_pred EeeCc-chhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcc--hHHHHHHH-hcchhheecccCCC
Confidence 45666 788999999999999999999999985 336678999999999999999 88888888 88999999999999
Q ss_pred chhHHHHHh
Q 042220 86 TPLHVLAAV 94 (255)
Q Consensus 86 TpLh~A~~~ 94 (255)
||-.-|-+.
T Consensus 969 tp~eraqqa 977 (1004)
T KOG0782|consen 969 TPQERAQQA 977 (1004)
T ss_pred ChHHHHHhc
Confidence 997766554
No 96
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.29 E-value=1.5e-06 Score=78.90 Aligned_cols=61 Identities=25% Similarity=0.286 Sum_probs=42.8
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHh
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRN 70 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll 70 (255)
+..+|. .|+||||.|+..|+.+.++.|+..+++. ..+|++||+|||-|+..|+ .+++..++
T Consensus 48 id~~D~-~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv-~~kN~~gWs~L~EAv~~g~--~q~i~~vl 108 (560)
T KOG0522|consen 48 IDRRDP-PGRTPLHLAVRLGHVEAARILLSAGADV-SIKNNEGWSPLHEAVSTGN--EQIITEVL 108 (560)
T ss_pred eccccC-CCCccHHHHHHhcCHHHHHHHHhcCCCc-cccccccccHHHHHHHcCC--HHHHHHHH
Confidence 344566 6777777777777777777777777776 6677777777777777777 65554444
No 97
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.16 E-value=4.7e-06 Score=75.70 Aligned_cols=80 Identities=16% Similarity=0.184 Sum_probs=66.1
Q ss_pred cHHHHHHHcChHHHHHH-HHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHHHh
Q 042220 16 TALLLAAGRGHIRVVNE-IISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLAAV 94 (255)
Q Consensus 16 tpLh~Aa~~g~~~~v~~-Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~~~ 94 (255)
.|+|+++.....+-.+. +...-....+.+|..|+||||+|+..|+ ...++.|+ ..++++..+|++|++|||-|+..
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~--~~~a~~Ll-~a~Adv~~kN~~gWs~L~EAv~~ 98 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGH--VEAARILL-SAGADVSIKNNEGWSPLHEAVST 98 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcC--HHHHHHHH-hcCCCccccccccccHHHHHHHc
Confidence 45999998877766654 3333344457789999999999999999 99999998 78999999999999999999988
Q ss_pred hhhc
Q 042220 95 LQKE 98 (255)
Q Consensus 95 ~~~~ 98 (255)
+..+
T Consensus 99 g~~q 102 (560)
T KOG0522|consen 99 GNEQ 102 (560)
T ss_pred CCHH
Confidence 6553
No 98
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.15 E-value=2.9e-06 Score=77.66 Aligned_cols=59 Identities=24% Similarity=0.201 Sum_probs=51.2
Q ss_pred CCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhh
Q 042220 13 QKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEM 75 (255)
Q Consensus 13 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~ 75 (255)
+|+|+||.||+.|++.+.++|+.++.|+ ..+|.+|+|+|.||-+.|. .+++.+|+ ..|+
T Consensus 660 ~grt~LHLa~~~gnVvl~QLLiWyg~dv-~~rda~g~t~l~yar~a~s--qec~d~ll-q~gc 718 (749)
T KOG0705|consen 660 DGRTALHLAARKGNVVLAQLLIWYGVDV-MARDAHGRTALFYARQAGS--QECIDVLL-QYGC 718 (749)
T ss_pred CCcchhhhhhhhcchhHHHHHHHhCccc-eecccCCchhhhhHhhccc--HHHHHHHH-HcCC
Confidence 7889999999999999999999999888 7889999999999999988 89998888 4543
No 99
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.05 E-value=3e-06 Score=82.28 Aligned_cols=78 Identities=24% Similarity=0.276 Sum_probs=73.2
Q ss_pred CCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHH
Q 042220 13 QKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLA 92 (255)
Q Consensus 13 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~ 92 (255)
.|.|+||.|+..|....++.|++.++++ +.+|..|+||+|.+...|+ ......++ ++|++.+..|.+|.+||++|.
T Consensus 655 ~~~s~lh~a~~~~~~~~~e~ll~~ga~v-n~~d~~g~~plh~~~~~g~--~~~~~~ll-~~~a~~~a~~~~~~~~l~~a~ 730 (785)
T KOG0521|consen 655 IGCSLLHVAVGTGDSGAVELLLQNGADV-NALDSKGRTPLHHATASGH--TSIACLLL-KRGADPNAFDPDGKLPLDIAM 730 (785)
T ss_pred cccchhhhhhccchHHHHHHHHhcCCcc-hhhhccCCCcchhhhhhcc--cchhhhhc-cccccccccCccCcchhhHHh
Confidence 5799999999999999999999999997 9999999999999999999 88888887 799999999999999999997
Q ss_pred Hh
Q 042220 93 AV 94 (255)
Q Consensus 93 ~~ 94 (255)
..
T Consensus 731 ~~ 732 (785)
T KOG0521|consen 731 EA 732 (785)
T ss_pred hh
Confidence 76
No 100
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=97.92 E-value=3.4e-06 Score=82.47 Aligned_cols=81 Identities=16% Similarity=0.125 Sum_probs=64.1
Q ss_pred CCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhc-cCCCCCchhHHH
Q 042220 13 QKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINK-QDVNGNTPLHVL 91 (255)
Q Consensus 13 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~-~d~~G~TpLh~A 91 (255)
+-.|+|-.||..||.|.+++|+.+++++ +.+|+.|.+||.+|+..|| ..+++.|+ +..+++++ .|+.++|+|.+|
T Consensus 756 n~~t~LT~acaggh~e~vellv~rgani-ehrdkkgf~plImaatagh--~tvV~~ll-k~ha~veaQsdrtkdt~lSla 831 (2131)
T KOG4369|consen 756 NIKTNLTSACAGGHREEVELLVVRGANI-EHRDKKGFVPLIMAATAGH--ITVVQDLL-KAHADVEAQSDRTKDTMLSLA 831 (2131)
T ss_pred cccccccccccCccHHHHHHHHHhcccc-cccccccchhhhhhcccCc--hHHHHHHH-hhhhhhhhhcccccCceEEEe
Confidence 4568888888888888888888888887 8888888888888888888 88888887 55677765 477788888888
Q ss_pred HHhhhh
Q 042220 92 AAVLQK 97 (255)
Q Consensus 92 ~~~~~~ 97 (255)
+.-+..
T Consensus 832 csggr~ 837 (2131)
T KOG4369|consen 832 CSGGRT 837 (2131)
T ss_pred cCCCcc
Confidence 765443
No 101
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=97.86 E-value=7.3e-06 Score=73.60 Aligned_cols=62 Identities=26% Similarity=0.251 Sum_probs=56.0
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHh
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRN 70 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll 70 (255)
++.+|- +.+|+||.||..|+++++++|++.+....+.+|+.|+|||.-|...+| .+++++|-
T Consensus 532 ~~~~Dy-D~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h--~~v~k~L~ 593 (622)
T KOG0506|consen 532 LETKDY-DDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKH--KEVVKLLE 593 (622)
T ss_pred cccccc-ccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCc--HHHHHHHH
Confidence 456777 899999999999999999999998766558899999999999999999 99999885
No 102
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=97.83 E-value=7.9e-06 Score=79.98 Aligned_cols=89 Identities=21% Similarity=0.242 Sum_probs=81.5
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
+..+|+ .|.+||.+|+-.||..+++.|+++++++-.+.|+.+.|+|.+||..|+ .++++.|+ ..|++-..++....
T Consensus 783 iehrdk-kgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr--~~vvelLl-~~gankehrnvsDy 858 (2131)
T KOG4369|consen 783 IEHRDK-KGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGR--TRVVELLL-NAGANKEHRNVSDY 858 (2131)
T ss_pred cccccc-ccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCc--chHHHHHH-Hhhccccccchhhc
Confidence 456888 999999999999999999999999999967789999999999999999 99999999 88999999999999
Q ss_pred chhHHHHHhhhhc
Q 042220 86 TPLHVLAAVLQKE 98 (255)
Q Consensus 86 TpLh~A~~~~~~~ 98 (255)
|||.+|..-+..+
T Consensus 859 tPlsla~Sggy~~ 871 (2131)
T KOG4369|consen 859 TPLSLARSGGYTK 871 (2131)
T ss_pred CchhhhcCcchHH
Confidence 9999998765554
No 103
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=97.79 E-value=4.1e-05 Score=69.20 Aligned_cols=56 Identities=18% Similarity=0.138 Sum_probs=50.7
Q ss_pred CCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHh
Q 042220 12 DQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRN 70 (255)
Q Consensus 12 ~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll 70 (255)
+.|.||||.|++.|+..-++.|+-+|+|+ ...|.+|+||+.+|-..|| -++.+-|+
T Consensus 165 ekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~-~a~d~~GmtP~~~AR~~gH--~~laeRl~ 220 (669)
T KOG0818|consen 165 EKGNTPLHVAAKAGQILQAELLAVYGADP-GAQDSSGMTPVDYARQGGH--HELAERLV 220 (669)
T ss_pred ccCCchhHHHHhccchhhhhHHhhccCCC-CCCCCCCCcHHHHHHhcCc--hHHHHHHH
Confidence 36999999999999999999999999999 8899999999999999999 66665554
No 104
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.75 E-value=6.3e-05 Score=60.22 Aligned_cols=64 Identities=19% Similarity=0.086 Sum_probs=58.2
Q ss_pred CcceeecCCCCCcHHHHHHHcChHHHHHHHHHhC-CCcccccccCCchHHHHHHHhCCchHHHHHHHhh
Q 042220 4 SAACISDNDQKMTALLLAAGRGHIRVVNEIISTC-PDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNR 71 (255)
Q Consensus 4 ~~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~-~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~ 71 (255)
..+|.+|. .||||++.|+..|+.+.+.+|+.++ +++ ...|..|.+++.+|-+.|+ .++++.|.+
T Consensus 3 ~~in~rD~-fgWTalmcaa~eg~~eavsyllgrg~a~v-gv~d~ssldaaqlaek~g~--~~fvh~lfe 67 (223)
T KOG2384|consen 3 GNINARDA-FGWTALMCAAMEGSNEAVSYLLGRGVAFV-GVTDESSLDAAQLAEKGGA--QAFVHSLFE 67 (223)
T ss_pred CCccchhh-hcchHHHHHhhhcchhHHHHHhccCcccc-cccccccchHHHHHHhcCh--HHHHHHHHH
Confidence 35789999 9999999999999999999999999 555 8999999999999999999 998888863
No 105
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=97.59 E-value=1.7e-05 Score=75.71 Aligned_cols=65 Identities=20% Similarity=0.168 Sum_probs=57.8
Q ss_pred HHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCC-CCchhHHHHHhhhhc
Q 042220 31 NEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVN-GNTPLHVLAAVLQKE 98 (255)
Q Consensus 31 ~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~-G~TpLh~A~~~~~~~ 98 (255)
..+-+.|.+..+.+|..|||+||+++..++ .+++++|+ +.|++++.+|.+ |.||||-|...|+.+
T Consensus 35 ~F~~k~c~n~anikD~~GR~alH~~~S~~k--~~~l~wLl-qhGidv~vqD~ESG~taLHRaiyyG~id 100 (1267)
T KOG0783|consen 35 GFSEKSCQNLANIKDRYGRTALHIAVSENK--NSFLRWLL-QHGIDVFVQDEESGYTALHRAIYYGNID 100 (1267)
T ss_pred HHHHHhhhhhhhHHHhhccceeeeeeccch--hHHHHHHH-hcCceeeeccccccchHhhHhhhhchHH
Confidence 345556777778999999999999999999 99999999 679999999986 999999999998876
No 106
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.48 E-value=5e-05 Score=74.15 Aligned_cols=82 Identities=23% Similarity=0.213 Sum_probs=65.0
Q ss_pred CCCcHHHHHHHcChHHHHHHHHHh-CCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHH
Q 042220 13 QKMTALLLAAGRGHIRVVNEIIST-CPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVL 91 (255)
Q Consensus 13 ~G~tpLh~Aa~~g~~~~v~~Ll~~-~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A 91 (255)
.|++.+|.++..++...++.+++. +... ...|.+|...+|..+ .++ .+...++..-.+..++.+|.+|+||||+|
T Consensus 573 r~~lllhL~a~~lyawLie~~~e~~~~~~-~eld~d~qgV~hfca-~lg--~ewA~ll~~~~~~ai~i~D~~G~tpL~wA 648 (975)
T KOG0520|consen 573 RDMLLLHLLAELLYAWLIEKVIEWAGSGD-LELDRDGQGVIHFCA-ALG--YEWAFLPISADGVAIDIRDRNGWTPLHWA 648 (975)
T ss_pred cchHHHHHHHHHhHHHHHHHHhcccccCc-hhhcccCCChhhHhh-hcC--CceeEEEEeecccccccccCCCCcccchH
Confidence 689999999999999999999986 4333 567888999999944 444 45554444346788999999999999999
Q ss_pred HHhhhhc
Q 042220 92 AAVLQKE 98 (255)
Q Consensus 92 ~~~~~~~ 98 (255)
+..|+.+
T Consensus 649 a~~G~e~ 655 (975)
T KOG0520|consen 649 AFRGREK 655 (975)
T ss_pred hhcCHHH
Confidence 9998764
No 107
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=97.44 E-value=0.00021 Score=65.83 Aligned_cols=74 Identities=18% Similarity=0.160 Sum_probs=59.8
Q ss_pred HHHHHHcChHHHHHHHHHhCCCc--c-cccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHHHh
Q 042220 18 LLLAAGRGHIRVVNEIISTCPDC--C-KQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLAAV 94 (255)
Q Consensus 18 Lh~Aa~~g~~~~v~~Ll~~~~~~--~-~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~~~ 94 (255)
|..|....+...+-.|+.++... . ..-+.+|+|+||+|+..|+ ..+.+.|+ =.|.++..+|.+|+|+|.||-+.
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gn--Vvl~QLLi-Wyg~dv~~rda~g~t~l~yar~a 704 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGN--VVLAQLLI-WYGVDVMARDAHGRTALFYARQA 704 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcc--hhHHHHHH-HhCccceecccCCchhhhhHhhc
Confidence 45566667778888888887543 1 1235678999999999999 88888877 68999999999999999999887
No 108
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.37 E-value=0.00052 Score=60.45 Aligned_cols=68 Identities=16% Similarity=0.144 Sum_probs=59.7
Q ss_pred cHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCch
Q 042220 16 TALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTP 87 (255)
Q Consensus 16 tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~Tp 87 (255)
--|..||+.|..+.++.|++.|-++ |.+|+...+||.+|+..|| .+.+++|+ +.|+..+.-..+|.-.
T Consensus 38 ~elceacR~GD~d~v~~LVetgvnV-N~vD~fD~spL~lAsLcGH--e~vvklLL-enGAiC~rdtf~G~RC 105 (516)
T KOG0511|consen 38 GELCEACRAGDVDRVRYLVETGVNV-NAVDRFDSSPLYLASLCGH--EDVVKLLL-ENGAICSRDTFDGDRC 105 (516)
T ss_pred HHHHHHhhcccHHHHHHHHHhCCCc-chhhcccccHHHHHHHcCc--HHHHHHHH-HcCCcccccccCcchh
Confidence 3478999999999999999999888 8999999999999999999 99999999 7787776666666654
No 109
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.76 E-value=0.0025 Score=33.56 Aligned_cols=28 Identities=32% Similarity=0.420 Sum_probs=22.7
Q ss_pred CCCcHHHHHHHcChHHHHHHHHHhCCCc
Q 042220 13 QKMTALLLAAGRGHIRVVNEIISTCPDC 40 (255)
Q Consensus 13 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~ 40 (255)
+|.||+|+|+..|+.++++.|++.+.++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 3678888888888888888888877654
No 110
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=96.53 E-value=0.0028 Score=50.92 Aligned_cols=54 Identities=11% Similarity=0.071 Sum_probs=49.2
Q ss_pred cccccCCchHHHHHHHhCCchHHHHHHHhhhhh-hhhhccCCCCCchhHHHHHhhhhc
Q 042220 42 KQVDERGWNLLHFAMASSNLFQLHSRLRNRSVE-MLINKQDVNGNTPLHVLAAVLQKE 98 (255)
Q Consensus 42 ~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~-~~i~~~d~~G~TpLh~A~~~~~~~ 98 (255)
+.+|..|||+++.|+..|+ .+.+.+|+ .+| +.+...|..|++++.+|-+.++.+
T Consensus 6 n~rD~fgWTalmcaa~eg~--~eavsyll-grg~a~vgv~d~ssldaaqlaek~g~~~ 60 (223)
T KOG2384|consen 6 NARDAFGWTALMCAAMEGS--NEAVSYLL-GRGVAFVGVTDESSLDAAQLAEKGGAQA 60 (223)
T ss_pred cchhhhcchHHHHHhhhcc--hhHHHHHh-ccCcccccccccccchHHHHHHhcChHH
Confidence 7899999999999999999 99999999 667 899999999999999999886543
No 111
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=96.50 E-value=0.0046 Score=57.26 Aligned_cols=77 Identities=19% Similarity=0.148 Sum_probs=60.7
Q ss_pred HHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhh-hhhhhccCCCCCchhHHHHHhhh
Q 042220 18 LLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSV-EMLINKQDVNGNTPLHVLAAVLQ 96 (255)
Q Consensus 18 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~-~~~i~~~d~~G~TpLh~A~~~~~ 96 (255)
+..|+..++.--.++.-..+.+. -.++.+.++.||+|+..|+ .+++++++.+. ...++..|..|.|+||-|+..++
T Consensus 870 il~av~~~D~~klqE~h~~gg~l-l~~~~~~~sllh~a~~tg~--~eivkyildh~p~elld~~de~get~lhkaa~~~~ 946 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLNGGSL-LIQGPDHCSLLHYAAKTGN--GEIVKYILDHGPSELLDMADETGETALHKAACQRN 946 (1004)
T ss_pred HHHHHHhccHHHHHHHHhcCCce-EeeCcchhhHHHHHHhcCC--hHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcc
Confidence 45667777665556666667776 6789999999999999999 99999999432 24678899999999999988744
Q ss_pred h
Q 042220 97 K 97 (255)
Q Consensus 97 ~ 97 (255)
.
T Consensus 947 r 947 (1004)
T KOG0782|consen 947 R 947 (1004)
T ss_pred h
Confidence 3
No 112
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=96.49 E-value=0.00095 Score=65.49 Aligned_cols=85 Identities=15% Similarity=0.050 Sum_probs=58.5
Q ss_pred ecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhh------hhccCC
Q 042220 9 SDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEML------INKQDV 82 (255)
Q Consensus 9 ~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~------i~~~d~ 82 (255)
.|+ +|.--+|. |..++.+..-+++.......+.+|.+||||||+|+.+|+ ..++..|. +.|++ ....+-
T Consensus 604 ld~-d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~--e~l~a~l~-~lga~~~~~tdps~~~p 678 (975)
T KOG0520|consen 604 LDR-DGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFRGR--EKLVASLI-ELGADPGAVTDPSPETP 678 (975)
T ss_pred hcc-cCCChhhH-hhhcCCceeEEEEeecccccccccCCCCcccchHhhcCH--HHHHHHHH-HhccccccccCCCCCCC
Confidence 445 66666777 555555555555554444448899999999999999999 88888876 33332 334455
Q ss_pred CCCchhHHHHHhhhhc
Q 042220 83 NGNTPLHVLAAVLQKE 98 (255)
Q Consensus 83 ~G~TpLh~A~~~~~~~ 98 (255)
.|.|+-.+|..+|+..
T Consensus 679 ~g~ta~~la~s~g~~g 694 (975)
T KOG0520|consen 679 GGKTAADLARANGHKG 694 (975)
T ss_pred CCCchhhhhhcccccc
Confidence 6888888888776654
No 113
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.63 E-value=0.008 Score=54.83 Aligned_cols=40 Identities=23% Similarity=0.204 Sum_probs=19.4
Q ss_pred cHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHH
Q 042220 16 TALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAM 56 (255)
Q Consensus 16 tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~ 56 (255)
|+||+|+..|..+++.++|+.+.|+ ..+|..|+||..++.
T Consensus 432 T~LH~aa~qg~~k~v~~~Leeg~Dp-~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 432 TFLHYAAAQGARKCVKYFLEEGCDP-STKDGAGRTPYSLSA 471 (591)
T ss_pred hHHHHHHhcchHHHHHHHHHhcCCc-hhcccCCCCcccccc
Confidence 4455555555555555555544444 344445555544443
No 114
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.54 E-value=0.017 Score=52.82 Aligned_cols=64 Identities=16% Similarity=0.088 Sum_probs=51.1
Q ss_pred HHHHHHHHHhCCCcc-----cccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHHH
Q 042220 27 IRVVNEIISTCPDCC-----KQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLAA 93 (255)
Q Consensus 27 ~~~v~~Ll~~~~~~~-----~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~~ 93 (255)
...+++|.++..+.+ +..|.---|+||+|+.+|. .+++.+++ +-+++...+|..|.||..++..
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~--~k~v~~~L-eeg~Dp~~kd~~Grtpy~ls~n 472 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGA--RKCVKYFL-EEGCDPSTKDGAGRTPYSLSAN 472 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcch--HHHHHHHH-HhcCCchhcccCCCCccccccc
Confidence 566777777665442 2234556799999999999 99999999 5679999999999999999874
No 115
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=95.50 E-value=0.017 Score=30.11 Aligned_cols=27 Identities=22% Similarity=0.115 Sum_probs=22.6
Q ss_pred CCchHHHHHHHhCCchHHHHHHHhhhhhhh
Q 042220 47 RGWNLLHFAMASSNLFQLHSRLRNRSVEML 76 (255)
Q Consensus 47 ~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~ 76 (255)
+|.||+|+++..++ .++++.++ +.+.+
T Consensus 1 ~~~~~l~~~~~~~~--~~~~~~ll-~~~~~ 27 (30)
T smart00248 1 DGRTPLHLAAENGN--LEVVKLLL-DKGAD 27 (30)
T ss_pred CCCCHHHHHHHcCC--HHHHHHHH-HcCCC
Confidence 47899999999999 99999998 44443
No 116
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=95.12 E-value=0.027 Score=55.37 Aligned_cols=51 Identities=27% Similarity=0.249 Sum_probs=45.5
Q ss_pred ccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHHHhhhhc
Q 042220 45 DERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLAAVLQKE 98 (255)
Q Consensus 45 d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~~~~~~~ 98 (255)
-..|.|+||.|+..+. ....+.|+ +.|+++|.+|..|+||+|.+...|+..
T Consensus 653 ~~~~~s~lh~a~~~~~--~~~~e~ll-~~ga~vn~~d~~g~~plh~~~~~g~~~ 703 (785)
T KOG0521|consen 653 LCIGCSLLHVAVGTGD--SGAVELLL-QNGADVNALDSKGRTPLHHATASGHTS 703 (785)
T ss_pred hhcccchhhhhhccch--HHHHHHHH-hcCCcchhhhccCCCcchhhhhhcccc
Confidence 3567999999999999 88889888 789999999999999999999886654
No 117
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=93.77 E-value=0.082 Score=51.37 Aligned_cols=52 Identities=23% Similarity=0.205 Sum_probs=29.8
Q ss_pred HHHHHHHcChHHHHHHHHHhCCC---cccccccCCchHHHHHHHhCCchHHHHHHHh
Q 042220 17 ALLLAAGRGHIRVVNEIISTCPD---CCKQVDERGWNLLHFAMASSNLFQLHSRLRN 70 (255)
Q Consensus 17 pLh~Aa~~g~~~~v~~Ll~~~~~---~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll 70 (255)
-...|+++|+...++..++.... ..+.+|.-|+++||.|..+.+ .++.+.|+
T Consensus 28 ~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nen--le~~eLLl 82 (822)
T KOG3609|consen 28 GFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNEN--LELQELLL 82 (822)
T ss_pred HHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceeccccccc--HHHHHHHh
Confidence 34556666666666666655433 124556666666666666666 55555554
No 118
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=92.76 E-value=0.11 Score=50.58 Aligned_cols=67 Identities=12% Similarity=-0.027 Sum_probs=48.1
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCc-------------------------c----------cccccCCc
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDC-------------------------C----------KQVDERGW 49 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~-------------------------~----------~~~d~~G~ 49 (255)
.+|..|. -|+++||.|..+.|.|+.++|+++.-.. . ...-.-+.
T Consensus 54 ninc~d~-lGr~al~iai~nenle~~eLLl~~~~~~gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~di 132 (822)
T KOG3609|consen 54 NINCRDP-LGRLALHIAIDNENLELQELLLDTSSEEGDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDI 132 (822)
T ss_pred chhccCh-HhhhceecccccccHHHHHHHhcCccccchHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCc
Confidence 3567787 8889998888888888888888774111 0 01112356
Q ss_pred hHHHHHHHhCCchHHHHHHHhhhhhh
Q 042220 50 NLLHFAMASSNLFQLHSRLRNRSVEM 75 (255)
Q Consensus 50 t~Lh~A~~~g~~~~~~~~~Ll~~~~~ 75 (255)
||+.+||..++ .|++++|+ .+|.
T Consensus 133 tPliLAAh~Nn--yEil~~Ll-~kg~ 155 (822)
T KOG3609|consen 133 TPLMLAAHLNN--FEILQCLL-TRGH 155 (822)
T ss_pred cHHHHHHHhcc--hHHHHHHH-HcCC
Confidence 89999999999 99999998 4443
No 119
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=92.40 E-value=0.15 Score=45.38 Aligned_cols=52 Identities=23% Similarity=0.291 Sum_probs=41.7
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCccccccc-CCchHHHHHHHhCC
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDE-RGWNLLHFAMASSN 60 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~-~G~t~Lh~A~~~g~ 60 (255)
.+|..|+ ....||.+|+-.||.++++.|+++|+-| . +|. +|..+ |+++.+.+
T Consensus 61 nVN~vD~-fD~spL~lAsLcGHe~vvklLLenGAiC-~-rdtf~G~RC-~YgaLnd~ 113 (516)
T KOG0511|consen 61 NVNAVDR-FDSSPLYLASLCGHEDVVKLLLENGAIC-S-RDTFDGDRC-HYGALNDR 113 (516)
T ss_pred Ccchhhc-ccccHHHHHHHcCcHHHHHHHHHcCCcc-c-ccccCcchh-hhhhhhHH
Confidence 4688899 8899999999999999999999999987 3 444 45544 66666554
No 120
>COG4298 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=87.18 E-value=1.9 Score=29.90 Aligned_cols=50 Identities=20% Similarity=0.147 Sum_probs=34.6
Q ss_pred HHHhHhHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcC
Q 042220 157 AFVVSDVIAMVLSLSAVFIHFLTSTKTLRQIWFLFNVAHYSLMASMLAMVVAFVTGTYAMLAP 219 (255)
Q Consensus 157 ~F~~~n~~a~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~m~~af~~~~~~~~~~ 219 (255)
+++++|..||-.|...+.+.++-.+-+.+ .+ +..+|.++|.+|+-+.+.+
T Consensus 15 awi~f~waafg~s~~m~~~gi~~lPVD~w-~K------------Gy~~MG~lfltgSt~tL~K 64 (95)
T COG4298 15 AWIMFNWAAFGASYFMLGLGIWLLPVDLW-TK------------GYWAMGILFLTGSTVTLVK 64 (95)
T ss_pred hhHhHHHHHHHHHHHHHHHHhheechHHH-HH------------HHHHHHHHHHhcchhhhhH
Confidence 46889999999998888875555544311 11 4556777888888766654
No 121
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=80.01 E-value=4.5 Score=27.48 Aligned_cols=48 Identities=19% Similarity=0.171 Sum_probs=38.7
Q ss_pred CcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhh
Q 042220 15 MTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRS 72 (255)
Q Consensus 15 ~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~ 72 (255)
..-+..|...|+.|+++.+++.+ .. | ...+..|+...+ .+++++|+++
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~~~-~~----~---~~~l~~AI~~H~--n~i~~~l~~~ 54 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLKKN-KP----D---NDCLEYAIKSHN--NEIADWLIEN 54 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHh-cc----H---HHHHHHHHHHhh--HHHHHHHHHh
Confidence 34678999999999999998654 22 1 457999999999 9999999854
No 122
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=47.68 E-value=42 Score=27.22 Aligned_cols=44 Identities=18% Similarity=0.065 Sum_probs=32.1
Q ss_pred HHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHh
Q 042220 18 LLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRN 70 (255)
Q Consensus 18 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll 70 (255)
|..|+.+|-...+.+.++++.+. + .++|..|+.++| ..++.+++
T Consensus 147 l~~a~~kgll~F~letlkygg~~-~------~~vls~Av~ynh--RkIL~yfi 190 (192)
T PF03158_consen 147 LEKAAAKGLLPFVLETLKYGGNV-D------IIVLSQAVKYNH--RKILDYFI 190 (192)
T ss_pred HHHHHHCCCHHHHHHHHHcCCcc-c------HHHHHHHHHhhH--HHHHHHhh
Confidence 46788888888888888877665 2 278888888888 77776654
No 123
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=46.84 E-value=11 Score=31.00 Aligned_cols=49 Identities=20% Similarity=0.171 Sum_probs=36.6
Q ss_pred cccCCchHHHHHHHhCCchHHHHH-HHhh---hhhhhhhccCCCCCchhHHHHHh
Q 042220 44 VDERGWNLLHFAMASSNLFQLHSR-LRNR---SVEMLINKQDVNGNTPLHVLAAV 94 (255)
Q Consensus 44 ~d~~G~t~Lh~A~~~g~~~~~~~~-~Ll~---~~~~~i~~~d~~G~TpLh~A~~~ 94 (255)
.|.+..+|||-|+.-++ .+++- ++++ +....+|..|.+|..+|.+|-..
T Consensus 218 Id~kTe~~LHk~iki~R--EDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~ 270 (280)
T KOG4591|consen 218 IDGKTENPLHKAIKIER--EDVLFLYFIEMDAKIPGILNDADHNGALALDIALCR 270 (280)
T ss_pred HcCCCcchhHHhhhccc--cceeeehhhhccccccccccccCCCchHHHHHHHHH
Confidence 46777889999999998 76543 3332 23456788899999999998654
No 124
>PF12304 BCLP: Beta-casein like protein; InterPro: IPR020977 This entry represents eukaryotic proteins that are typically between 216 to 240 amino acids in length which have two conserved sequence motifs: VLR and TRIY. Beta-casein-like protein is associated with cell morphology and a regulation of growth pattern of tumours. It is found in adenocarcinomas of uterine cervical tissues[].
Probab=41.32 E-value=61 Score=26.16 Aligned_cols=24 Identities=17% Similarity=0.380 Sum_probs=20.2
Q ss_pred HHhHhHHHHHHHHHHHHHHHHhhc
Q 042220 158 FVVSDVIAMVLSLSAVFIHFLTST 181 (255)
Q Consensus 158 F~~~n~~a~~~S~~~~~~~~~~~~ 181 (255)
|.++|.+|..+-+.+|...+.++.
T Consensus 40 Y~vsNiisv~Sgll~I~~GI~AIv 63 (188)
T PF12304_consen 40 YAVSNIISVTSGLLSIICGIVAIV 63 (188)
T ss_pred hhHHHHHHHHHHHHHHHHhHHHHh
Confidence 568999999999999988777764
No 125
>TIGR01569 A_tha_TIGR01569 plant integral membrane protein TIGR01569. This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized.
Probab=40.67 E-value=1.7e+02 Score=22.75 Aligned_cols=35 Identities=26% Similarity=0.306 Sum_probs=28.9
Q ss_pred cccccCCchhhHHHhHhHHHHHHHHHHHHHHHHhh
Q 042220 146 TSILIKNAAFQAFVVSDVIAMVLSLSAVFIHFLTS 180 (255)
Q Consensus 146 ~~~~~~~~~f~~F~~~n~~a~~~S~~~~~~~~~~~ 180 (255)
+..+.+.+.|+.|+..|.++...|+..+...+...
T Consensus 35 ~a~f~d~~af~y~v~anai~~~Ysll~l~~~~~~~ 69 (154)
T TIGR01569 35 KAKFSDLPAFVYFVVANAIACGYSLLSLVVSIFGL 69 (154)
T ss_pred eeeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667789999999999999999999988755443
No 126
>PF07344 Amastin: Amastin surface glycoprotein; InterPro: IPR009944 This family contains the eukaryotic surface glycoprotein amastin (approximately 180 residues long).In Trypanosoma cruzi, amastin is particularly abundant during the amastigote stage.
Probab=40.34 E-value=1.7e+02 Score=22.66 Aligned_cols=22 Identities=18% Similarity=0.249 Sum_probs=9.9
Q ss_pred hhhHHHhHhHHHHHHHHHHHHH
Q 042220 154 AFQAFVVSDVIAMVLSLSAVFI 175 (255)
Q Consensus 154 ~f~~F~~~n~~a~~~S~~~~~~ 175 (255)
+|++=-.+..+|.+.+.++.++
T Consensus 61 ~f~aa~afaIisi~~~~~a~v~ 82 (155)
T PF07344_consen 61 RFRAAQAFAIISIFVYGAAFVL 82 (155)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444443
No 127
>PF01544 CorA: CorA-like Mg2+ transporter protein; InterPro: IPR002523 The CorA transport system is the primary Mg2+ influx system of Salmonella typhimurium and Escherichia coli [, ]. CorA is virtually ubiquitous in the Bacteria and Archaea. There are also eukaryotic relatives of this protein. Transporter ZntB mediates efflux of zinc ions [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 2HN1_A 3NWI_D 3NVO_B 3CK6_A 2IUB_E 2BBJ_E 2HN2_A 2BBH_A.
Probab=39.94 E-value=55 Score=27.70 Aligned_cols=21 Identities=19% Similarity=0.498 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHhHHHH
Q 042220 196 YSLMASMLAMVVAFVTGTYAM 216 (255)
Q Consensus 196 ~~~~~s~~~m~~af~~~~~~~ 216 (255)
.+.++++..+..+|++|+|-+
T Consensus 236 ~LT~~t~iflPlt~i~g~fGM 256 (292)
T PF01544_consen 236 VLTIVTAIFLPLTFITGIFGM 256 (292)
T ss_dssp HHHHHHHHHHHHHHHTTSTTS
T ss_pred HHHHHHHHHHHHHHHHHHhhC
Confidence 456678888999999999966
No 128
>PRK09546 zntB zinc transporter; Reviewed
Probab=39.10 E-value=93 Score=27.31 Aligned_cols=21 Identities=19% Similarity=0.430 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHhHHHH
Q 042220 196 YSLMASMLAMVVAFVTGTYAM 216 (255)
Q Consensus 196 ~~~~~s~~~m~~af~~~~~~~ 216 (255)
.+..+++.++..+|++|+|=+
T Consensus 266 ~Ltilt~IflPlT~IaGiyGM 286 (324)
T PRK09546 266 TMSLMAMVFLPTTFLTGLFGV 286 (324)
T ss_pred HHHHHHHHHHHHHHHHhhhcc
Confidence 455678899999999999963
No 129
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=38.30 E-value=2.2e+02 Score=23.21 Aligned_cols=33 Identities=6% Similarity=-0.027 Sum_probs=22.1
Q ss_pred HHHHHHHhhhhhhhhhccCCCCCchhHHHHHhhh
Q 042220 63 QLHSRLRNRSVEMLINKQDVNGNTPLHVLAAVLQ 96 (255)
Q Consensus 63 ~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~~~~~ 96 (255)
.|++..|++....-..++|-.| ||=.+|.+..+
T Consensus 32 ~eil~~LleaQk~G~tA~~lfG-~P~~~a~eli~ 64 (206)
T PF06570_consen 32 EEILPHLLEAQKKGKTARQLFG-DPKEYADELIK 64 (206)
T ss_pred HHHHHHHHHHHhCCCcHHHHcC-CHHHHHHHHhc
Confidence 4556666654445566778888 88888877633
No 130
>TIGR00383 corA magnesium Mg(2+) and cobalt Co(2+) transport protein (corA). The article in Microb Comp Genomics 1998;3(3):151-69 (Medline:98448512) discusses this family and suggests that some members may have functions other than Mg2+ transport.
Probab=34.13 E-value=1.3e+02 Score=26.04 Aligned_cols=21 Identities=24% Similarity=0.510 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHHhHHHH
Q 042220 196 YSLMASMLAMVVAFVTGTYAM 216 (255)
Q Consensus 196 ~~~~~s~~~m~~af~~~~~~~ 216 (255)
.+..+|+..+..+|++|+|=+
T Consensus 260 ~LTvvt~IflP~t~IaGiyGM 280 (318)
T TIGR00383 260 ILTVVSTIFIPLTFIAGIYGM 280 (318)
T ss_pred HHHHHHHHHHHHHHHHHHHhC
Confidence 456679999999999999974
No 131
>PF11026 DUF2721: Protein of unknown function (DUF2721); InterPro: IPR021279 This family is conserved in bacteria. The function is not known.
Probab=32.80 E-value=2.2e+02 Score=21.48 Aligned_cols=21 Identities=14% Similarity=0.346 Sum_probs=11.3
Q ss_pred hHhHHHHHHHHHHHHHHHHhh
Q 042220 160 VSDVIAMVLSLSAVFIHFLTS 180 (255)
Q Consensus 160 ~~n~~a~~~S~~~~~~~~~~~ 180 (255)
.+.++|+.++..+++.+|...
T Consensus 67 ~~~~~s~ll~~l~i~~lf~~~ 87 (130)
T PF11026_consen 67 TLATLSALLVCLVILLLFLSA 87 (130)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 445555555555555545543
No 132
>PF11241 DUF3043: Protein of unknown function (DUF3043); InterPro: IPR021403 Some members in this family of proteins with unknown function are annotated as membrane proteins. This cannot be confirmed.
Probab=30.14 E-value=1.5e+02 Score=23.77 Aligned_cols=19 Identities=21% Similarity=0.607 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 042220 192 NVAHYSLMASMLAMVVAFV 210 (255)
Q Consensus 192 ~~~~~~~~~s~~~m~~af~ 210 (255)
.++-.+|.+++..+++.|+
T Consensus 76 ~i~e~fmP~alv~lv~~~v 94 (170)
T PF11241_consen 76 NIGEFFMPVALVLLVLSFV 94 (170)
T ss_pred chHHHHHHHHHHHHHHHHH
Confidence 4555555555555555555
No 133
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=29.28 E-value=95 Score=26.24 Aligned_cols=21 Identities=24% Similarity=0.289 Sum_probs=11.4
Q ss_pred CcHHHHHHHcChHHHHHHHHH
Q 042220 15 MTALLLAAGRGHIRVVNEIIS 35 (255)
Q Consensus 15 ~tpLh~Aa~~g~~~~v~~Ll~ 35 (255)
.+++-++..++..++..+|++
T Consensus 180 ~~Am~~si~~~K~dva~~lls 200 (284)
T PF06128_consen 180 HQAMWLSIGNAKEDVALYLLS 200 (284)
T ss_pred HHHHHHHhcccHHHHHHHHHh
Confidence 445555555555555555554
No 134
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=26.48 E-value=48 Score=27.30 Aligned_cols=48 Identities=19% Similarity=0.108 Sum_probs=36.6
Q ss_pred CCCcHHHHHHHcChHHHHH-HHHHhC---CCcccccccCCchHHHHHHHhCC
Q 042220 13 QKMTALLLAAGRGHIRVVN-EIISTC---PDCCKQVDERGWNLLHFAMASSN 60 (255)
Q Consensus 13 ~G~tpLh~Aa~~g~~~~v~-~Ll~~~---~~~~~~~d~~G~t~Lh~A~~~g~ 60 (255)
.-..|||-|.+-++.+++- ++++.. |...+..|.+|-.+|.+|-....
T Consensus 221 kTe~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~~~ 272 (280)
T KOG4591|consen 221 KTENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALCREL 272 (280)
T ss_pred CCcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHHHHH
Confidence 5568999999999988764 455544 44557789999999999976554
No 135
>PF11286 DUF3087: Protein of unknown function (DUF3087); InterPro: IPR021438 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
Probab=22.66 E-value=4e+02 Score=21.21 Aligned_cols=48 Identities=19% Similarity=0.198 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcC----CcchhhHHHHHHHHH
Q 042220 187 IWFLFNVAHYSLMASMLAMVVAFVTGTYAMLAP----SVGLSVATCVLGLSF 234 (255)
Q Consensus 187 ~~~~~~~~~~~~~~s~~~m~~af~~~~~~~~~~----~~~~~~~~~~~~~~~ 234 (255)
.++.++.....+..++.....+|.+++....+. ..+|...-.++++..
T Consensus 11 YRk~~n~v~~~~v~~lai~sl~~s~llI~lFg~~~~~nf~~NllGVil~~~~ 62 (165)
T PF11286_consen 11 YRKHLNRVIVACVASLAILSLAFSQLLIALFGGESGGNFHWNLLGVILGLLL 62 (165)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCceeeeHHHHHHHHHH
Confidence 344555555555566677777888888877765 346654443444333
No 136
>PF11177 DUF2964: Protein of unknown function (DUF2964); InterPro: IPR021347 This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=22.46 E-value=2.4e+02 Score=18.53 Aligned_cols=22 Identities=5% Similarity=0.161 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhHH
Q 042220 193 VAHYSLMASMLAMVVAFVTGTY 214 (255)
Q Consensus 193 ~~~~~~~~s~~~m~~af~~~~~ 214 (255)
++....++++.++.++--..++
T Consensus 10 lAtiavFiaLagl~~~I~GlLf 31 (62)
T PF11177_consen 10 LATIAVFIALAGLAAVIHGLLF 31 (62)
T ss_pred HHHHHHHHHHHHHHHHhhhhhc
Confidence 4555566666666655444443
No 137
>PF03669 UPF0139: Uncharacterised protein family (UPF0139); InterPro: IPR005351 This is a small family of proteins of unknown function which appear to be related to the hypothetical protein CG10674 from Drosophila melanogaster (Fruit fly)(Q9VRJ8 from SWISSPROT).
Probab=21.68 E-value=2.6e+02 Score=20.30 Aligned_cols=16 Identities=13% Similarity=0.486 Sum_probs=13.3
Q ss_pred hHhHHHHHHHHHHHHH
Q 042220 160 VSDVIAMVLSLSAVFI 175 (255)
Q Consensus 160 ~~n~~a~~~S~~~~~~ 175 (255)
+.|++++++++..+++
T Consensus 34 y~~~L~~~~~m~gl~m 49 (103)
T PF03669_consen 34 YMSFLGMIFSMAGLMM 49 (103)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5788888888888887
No 138
>MTH00213 ND6 NADH dehydrogenase subunit 6; Provisional
Probab=21.06 E-value=2.6e+02 Score=23.26 Aligned_cols=9 Identities=22% Similarity=0.549 Sum_probs=3.8
Q ss_pred HhHHHHhcC
Q 042220 211 TGTYAMLAP 219 (255)
Q Consensus 211 ~~~~~~~~~ 219 (255)
+|+|..+..
T Consensus 38 AgLyilLgA 46 (239)
T MTH00213 38 SGLFIVLGM 46 (239)
T ss_pred HHHHHHhcc
Confidence 344444433
No 139
>PRK11085 magnesium/nickel/cobalt transporter CorA; Provisional
Probab=20.50 E-value=3e+02 Score=24.25 Aligned_cols=21 Identities=19% Similarity=0.314 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHhHHHH
Q 042220 196 YSLMASMLAMVVAFVTGTYAM 216 (255)
Q Consensus 196 ~~~~~s~~~m~~af~~~~~~~ 216 (255)
.+..+++..|.-++++|+|=+
T Consensus 258 ~lTv~s~if~pptliagiyGM 278 (316)
T PRK11085 258 IFSVVSVVFLPPTLVASSYGM 278 (316)
T ss_pred HHHHHHHHHHHHHHHHhhccc
Confidence 456679999999999999863
No 140
>PF14126 DUF4293: Domain of unknown function (DUF4293)
Probab=20.38 E-value=4.1e+02 Score=20.53 Aligned_cols=17 Identities=18% Similarity=0.098 Sum_probs=8.0
Q ss_pred chhHHHHHHHHHHHHHH
Q 042220 182 KTLRQIWFLFNVAHYSL 198 (255)
Q Consensus 182 ~~~~~~~~~~~~~~~~~ 198 (255)
.++|.++.++.....++
T Consensus 74 yKnR~lQ~~L~~~nill 90 (149)
T PF14126_consen 74 YKNRKLQIRLCVLNILL 90 (149)
T ss_pred cccHHHHHHHHHHHHHH
Confidence 45555555544433333
No 141
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=20.10 E-value=35 Score=29.67 Aligned_cols=9 Identities=22% Similarity=0.549 Sum_probs=0.0
Q ss_pred HHhhhhhhe
Q 042220 241 AMSKFEVVC 249 (255)
Q Consensus 241 ~l~~~~~~~ 249 (255)
|+.|-|++|
T Consensus 70 mlF~RrLLC 78 (381)
T PF05297_consen 70 MLFKRRLLC 78 (381)
T ss_dssp ---------
T ss_pred HHHHHhhcC
Confidence 334444433
Done!