Query 042220
Match_columns 255
No_of_seqs 323 out of 2684
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 06:33:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042220.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042220hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.8 2E-19 6.9E-24 143.1 8.7 128 6-138 30-163 (169)
2 1n0q_A 3ANK, 3 ankyrin repeats 99.8 2.8E-19 9.7E-24 127.5 8.2 81 13-97 1-81 (93)
3 4gpm_A Engineered protein OR26 99.8 1.7E-19 5.6E-24 143.6 7.3 87 6-97 63-149 (169)
4 2zgd_A 3 repeat synthetic anky 99.7 5.2E-18 1.8E-22 124.9 7.1 90 3-97 14-103 (110)
5 3aaa_C Myotrophin, protein V-1 99.7 6.1E-18 2.1E-22 126.5 7.3 81 13-97 6-86 (123)
6 2jab_A H10-2-G3; HER2, darpin, 99.7 1.1E-17 3.8E-22 127.4 8.5 81 13-97 13-93 (136)
7 3c5r_A BARD-1, BRCA1-associate 99.7 4E-17 1.4E-21 124.2 11.4 84 8-96 5-88 (137)
8 3v30_A DNA-binding protein rfx 99.7 4.7E-18 1.6E-22 134.1 6.0 90 3-97 26-115 (172)
9 3f6q_A Integrin-linked protein 99.7 8.1E-17 2.8E-21 128.0 12.6 89 3-96 29-117 (179)
10 2rfm_A Putative ankyrin repeat 99.7 5.8E-18 2E-22 136.1 5.8 139 5-148 27-171 (192)
11 1d9s_A Cyclin-dependent kinase 99.7 4.5E-18 1.5E-22 129.6 4.6 87 5-97 4-91 (136)
12 4b93_B Ankyrin repeat domain-c 99.7 1.1E-17 3.9E-22 142.4 7.5 142 5-151 78-225 (269)
13 3twr_A Tankyrase-2; ankyrin re 99.7 1.2E-16 4.2E-21 125.1 12.8 86 5-95 34-119 (165)
14 3aaa_C Myotrophin, protein V-1 99.7 8.6E-17 3E-21 120.2 10.8 85 5-94 32-116 (123)
15 3deo_A Signal recognition part 99.7 3.9E-17 1.3E-21 130.7 9.4 88 5-97 68-156 (183)
16 3c5r_A BARD-1, BRCA1-associate 99.7 2.1E-17 7.3E-22 125.7 7.2 88 5-97 35-122 (137)
17 2l6b_A NR1C; ankyrin, consensu 99.7 1.9E-17 6.5E-22 122.2 6.7 85 8-97 4-88 (115)
18 4b93_B Ankyrin repeat domain-c 99.7 1.2E-17 3.9E-22 142.4 6.2 85 6-95 145-229 (269)
19 1awc_B Protein (GA binding pro 99.7 3.5E-17 1.2E-21 126.8 8.4 85 9-98 30-114 (153)
20 1d9s_A Cyclin-dependent kinase 99.7 1.2E-17 4.2E-22 127.2 5.4 87 5-97 37-124 (136)
21 3v31_A Ankyrin repeat family A 99.7 4.9E-17 1.7E-21 127.7 8.6 84 6-94 29-112 (167)
22 1awc_B Protein (GA binding pro 99.7 4.2E-17 1.4E-21 126.4 7.9 79 15-98 3-81 (153)
23 1bd8_A P19INK4D CDK4/6 inhibit 99.7 5.3E-17 1.8E-21 125.9 8.5 88 5-98 28-115 (156)
24 3aji_A 26S proteasome non-ATPa 99.7 4.8E-17 1.6E-21 133.9 8.4 91 3-98 30-120 (231)
25 3hra_A Ankyrin repeat family p 99.7 3.5E-17 1.2E-21 132.0 7.1 90 5-98 31-120 (201)
26 1bd8_A P19INK4D CDK4/6 inhibit 99.7 4.3E-17 1.5E-21 126.5 7.3 85 6-96 61-145 (156)
27 2y1l_E Darpin-8.4; hydrolase-i 99.7 6.2E-17 2.1E-21 127.7 8.3 83 7-94 41-123 (169)
28 1dcq_A PYK2-associated protein 99.7 7.3E-17 2.5E-21 138.1 8.8 87 6-97 162-251 (278)
29 2rfm_A Putative ankyrin repeat 99.7 7.7E-17 2.6E-21 129.5 8.4 88 6-98 61-148 (192)
30 2jab_A H10-2-G3; HER2, darpin, 99.7 4.4E-17 1.5E-21 124.0 5.9 88 5-97 39-126 (136)
31 1ihb_A P18-INK4C(INK6), cyclin 99.7 1.3E-16 4.3E-21 124.4 8.4 87 6-98 31-117 (162)
32 1bi7_B P16INK4A, MTS1, multipl 99.7 2.6E-17 8.8E-22 128.3 4.4 136 6-147 5-147 (156)
33 3v30_A DNA-binding protein rfx 99.7 1.6E-16 5.4E-21 125.3 8.7 88 6-98 62-149 (172)
34 1n0r_A 4ANK, 4 ankyrin repeats 99.7 1.9E-16 6.6E-21 117.7 8.5 80 14-97 2-81 (126)
35 1yyh_A HN1;, notch 1, ankyrin 99.7 1.5E-16 5E-21 133.5 8.8 140 6-149 50-195 (253)
36 3d9h_A CDNA FLJ77766, highly s 99.7 9.2E-17 3.1E-21 137.5 7.6 139 5-149 51-195 (285)
37 4hbd_A KN motif and ankyrin re 99.7 1.8E-16 6.2E-21 135.2 9.1 87 7-97 177-263 (276)
38 1oy3_D Transcription factor in 99.7 7.5E-17 2.6E-21 136.2 6.5 89 6-98 2-92 (282)
39 3v31_A Ankyrin repeat family A 99.7 1.1E-16 3.7E-21 125.6 6.9 82 13-98 2-83 (167)
40 1n0r_A 4ANK, 4 ankyrin repeats 99.7 2.1E-16 7.1E-21 117.5 8.1 87 6-97 28-114 (126)
41 1oy3_D Transcription factor in 99.7 4.7E-16 1.6E-20 131.3 11.3 86 6-96 151-237 (282)
42 2f8y_A Notch homolog 1, transl 99.7 2.3E-16 7.8E-21 129.2 8.9 91 4-98 16-106 (223)
43 3ui2_A Signal recognition part 99.7 2.5E-16 8.6E-21 131.9 9.2 88 5-97 69-157 (244)
44 2y1l_E Darpin-8.4; hydrolase-i 99.7 2.9E-16 1E-20 123.7 8.7 87 6-97 73-159 (169)
45 1yyh_A HN1;, notch 1, ankyrin 99.7 1.4E-16 4.8E-21 133.6 7.3 140 6-149 83-228 (253)
46 3aji_A 26S proteasome non-ATPa 99.6 1.6E-16 5.6E-21 130.7 7.5 89 5-98 65-153 (231)
47 3twr_A Tankyrase-2; ankyrin re 99.6 1.9E-16 6.6E-21 124.0 7.4 84 5-93 67-150 (165)
48 1ikn_D Protein (I-kappa-B-alph 99.6 1.8E-16 6.1E-21 131.3 7.3 140 5-149 37-189 (236)
49 1ihb_A P18-INK4C(INK6), cyclin 99.6 1.7E-16 5.8E-21 123.6 6.7 81 13-98 4-84 (162)
50 2dzn_A Probable 26S proteasome 99.6 1.6E-16 5.6E-21 130.3 6.9 86 7-96 30-119 (228)
51 3f6q_A Integrin-linked protein 99.6 2.8E-16 9.6E-21 124.9 7.9 87 5-96 64-150 (179)
52 1bi7_B P16INK4A, MTS1, multipl 99.6 9.4E-17 3.2E-21 125.0 5.0 88 5-98 37-125 (156)
53 2xai_A ASB-9, ankyrin repeat a 99.6 1.5E-16 5.1E-21 134.2 6.5 82 13-98 2-83 (261)
54 2f8y_A Notch homolog 1, transl 99.6 3.3E-16 1.1E-20 128.2 8.2 139 6-148 51-195 (223)
55 2rfa_A Transient receptor pote 99.6 1.9E-16 6.6E-21 130.5 6.8 92 3-98 27-135 (232)
56 1k1a_A B-cell lymphoma 3-encod 99.6 3.2E-16 1.1E-20 129.5 7.9 88 6-98 2-93 (241)
57 3ehr_A Osteoclast-stimulating 99.6 2.5E-16 8.4E-21 129.5 6.9 89 6-98 66-154 (222)
58 1s70_B 130 kDa myosin-binding 99.6 1E-15 3.4E-20 130.8 10.8 87 6-97 66-152 (299)
59 3deo_A Signal recognition part 99.6 1.2E-16 4.1E-21 127.8 4.5 82 10-97 41-123 (183)
60 3b7b_A Euchromatic histone-lys 99.6 3.8E-16 1.3E-20 129.0 7.5 88 6-98 4-91 (237)
61 2vge_A RELA-associated inhibit 99.6 3.8E-16 1.3E-20 129.8 7.4 92 2-98 10-101 (229)
62 3ehr_A Osteoclast-stimulating 99.6 5.6E-16 1.9E-20 127.3 8.2 85 5-94 98-183 (222)
63 2dzn_A Probable 26S proteasome 99.6 5.8E-16 2E-20 127.0 8.2 136 9-149 68-213 (228)
64 1k1a_A B-cell lymphoma 3-encod 99.6 6.7E-16 2.3E-20 127.5 8.1 90 4-98 37-130 (241)
65 3b7b_A Euchromatic histone-lys 99.6 9.6E-16 3.3E-20 126.6 8.9 86 7-97 38-124 (237)
66 2vge_A RELA-associated inhibit 99.6 5.9E-16 2E-20 128.6 7.6 89 5-98 46-137 (229)
67 4hbd_A KN motif and ankyrin re 99.6 3.4E-16 1.2E-20 133.5 6.1 140 6-149 104-255 (276)
68 2xai_A ASB-9, ankyrin repeat a 99.6 8.9E-16 3E-20 129.4 8.4 141 6-151 29-206 (261)
69 1ycs_B 53BP2, P53BP2; ankyrin 99.6 6.7E-16 2.3E-20 128.7 7.6 82 13-98 36-117 (239)
70 1sw6_A Regulatory protein SWI6 99.6 2E-15 6.7E-20 131.8 10.8 86 6-93 123-210 (327)
71 1ikn_D Protein (I-kappa-B-alph 99.6 8.3E-16 2.9E-20 127.2 7.9 89 6-98 71-165 (236)
72 1ycs_B 53BP2, P53BP2; ankyrin 99.6 1.6E-15 5.6E-20 126.3 9.7 80 13-97 4-83 (239)
73 3jxi_A Vanilloid receptor-rela 99.6 7.5E-16 2.6E-20 129.2 7.6 85 7-96 87-188 (260)
74 3t8k_A Uncharacterized protein 99.6 2E-16 6.9E-21 127.5 3.9 80 11-93 36-124 (186)
75 2etb_A Transient receptor pote 99.6 1.2E-15 4.2E-20 127.8 8.9 81 14-98 136-235 (256)
76 2rfa_A Transient receptor pote 99.6 9.5E-16 3.3E-20 126.3 8.1 86 7-97 69-167 (232)
77 1n11_A Ankyrin; clathrin, BAND 99.6 7.7E-16 2.6E-20 138.7 7.5 88 6-98 7-94 (437)
78 2etb_A Transient receptor pote 99.6 1.3E-15 4.3E-20 127.7 8.2 82 9-94 86-182 (256)
79 3kea_A K1L; tropism, ANK repea 99.6 4.3E-16 1.5E-20 133.3 5.0 87 5-98 23-109 (285)
80 2pnn_A Transient receptor pote 99.6 1.7E-15 5.9E-20 128.1 8.4 84 9-96 97-196 (273)
81 3utm_A Tankyrase-1; tankyrase, 99.6 2.2E-15 7.6E-20 130.8 9.3 90 4-98 49-138 (351)
82 2b0o_E UPLC1; arfgap, structur 99.6 1.6E-15 5.5E-20 131.2 7.8 84 9-97 186-272 (301)
83 3ui2_A Signal recognition part 99.6 5E-16 1.7E-20 130.1 4.2 81 13-98 44-125 (244)
84 3ljn_A Hypothetical protein; a 99.6 1.8E-15 6.3E-20 133.1 7.7 88 6-98 131-225 (364)
85 1wdy_A 2-5A-dependent ribonucl 99.6 6.3E-15 2.1E-19 124.1 10.6 84 10-98 36-119 (285)
86 1n11_A Ankyrin; clathrin, BAND 99.6 1.7E-15 5.8E-20 136.5 7.4 88 6-98 40-127 (437)
87 3lvq_E ARF-GAP with SH3 domain 99.6 1.7E-15 5.9E-20 139.6 7.6 84 10-98 168-254 (497)
88 3jxi_A Vanilloid receptor-rela 99.6 4.3E-15 1.5E-19 124.6 9.3 85 11-98 138-239 (260)
89 3ljn_A Hypothetical protein; a 99.6 2.8E-15 9.5E-20 132.0 8.3 87 6-97 166-257 (364)
90 3jue_A Arfgap with coiled-coil 99.6 4.6E-15 1.6E-19 131.9 8.8 87 6-97 226-314 (368)
91 3t8k_A Uncharacterized protein 99.6 1.1E-15 3.6E-20 123.3 4.1 77 14-96 6-87 (186)
92 3d9h_A CDNA FLJ77766, highly s 99.6 4.3E-15 1.5E-19 127.0 8.1 86 6-97 85-170 (285)
93 3hra_A Ankyrin repeat family p 99.6 4.2E-15 1.4E-19 119.6 7.3 87 6-96 65-152 (201)
94 1sw6_A Regulatory protein SWI6 99.6 3.4E-15 1.2E-19 130.3 6.8 85 5-94 193-326 (327)
95 2pnn_A Transient receptor pote 99.5 1.2E-14 4.1E-19 122.9 8.3 83 13-97 147-246 (273)
96 2fo1_E LIN-12 protein; beta-ba 99.5 9.5E-15 3.3E-19 129.6 7.8 87 7-98 273-360 (373)
97 1s70_B 130 kDa myosin-binding 99.5 8.3E-15 2.8E-19 125.1 7.0 82 8-94 194-275 (299)
98 1wdy_A 2-5A-dependent ribonucl 99.5 1.9E-14 6.5E-19 121.1 8.9 82 13-96 147-231 (285)
99 3eu9_A Huntingtin-interacting 99.5 1.5E-14 5E-19 118.9 7.8 89 6-98 35-123 (240)
100 3utm_A Tankyrase-1; tankyrase, 99.5 1.8E-14 6.2E-19 125.0 8.2 85 9-98 207-294 (351)
101 3kea_A K1L; tropism, ANK repea 99.5 1.4E-14 4.8E-19 123.9 7.3 82 13-98 61-143 (285)
102 2fo1_E LIN-12 protein; beta-ba 99.5 9.1E-15 3.1E-19 129.7 5.9 86 5-95 158-246 (373)
103 3eu9_A Huntingtin-interacting 99.5 3.2E-14 1.1E-18 116.8 8.3 86 8-98 4-90 (240)
104 2l6b_A NR1C; ankyrin, consensu 99.5 1.6E-14 5.3E-19 106.4 5.0 79 5-88 34-112 (115)
105 2b0o_E UPLC1; arfgap, structur 99.5 3.7E-14 1.3E-18 122.6 7.2 82 5-97 218-299 (301)
106 1n0q_A 3ANK, 3 ankyrin repeats 99.4 1.7E-13 5.9E-18 97.1 7.0 66 5-75 27-92 (93)
107 4g8k_A 2-5A-dependent ribonucl 99.4 2.9E-13 9.8E-18 117.8 8.1 90 6-98 161-253 (337)
108 4g8k_A 2-5A-dependent ribonucl 99.4 6E-13 2.1E-17 115.8 9.4 82 13-98 24-139 (337)
109 3jue_A Arfgap with coiled-coil 99.4 2.4E-13 8.3E-18 120.8 6.0 82 13-98 198-282 (368)
110 3lvq_E ARF-GAP with SH3 domain 99.3 3.6E-12 1.2E-16 117.4 9.9 81 14-98 132-221 (497)
111 1dcq_A PYK2-associated protein 99.3 7.7E-12 2.6E-16 106.8 11.1 80 15-97 131-218 (278)
112 2aja_A Ankyrin repeat family p 99.3 1.4E-13 5E-18 122.6 -0.0 85 9-98 124-213 (376)
113 2zgd_A 3 repeat synthetic anky 99.2 2.5E-11 8.4E-16 88.7 7.0 61 5-69 49-109 (110)
114 2aja_A Ankyrin repeat family p 99.2 4.6E-12 1.6E-16 112.9 3.0 83 9-98 88-177 (376)
115 4ev6_A Magnesium transport pro 29.8 76 0.0026 26.8 5.3 21 196-216 281-301 (339)
116 2iub_A CORA, divalent cation t 27.0 45 0.0015 28.6 3.4 21 196-216 305-325 (363)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.79 E-value=2e-19 Score=143.10 Aligned_cols=128 Identities=26% Similarity=0.237 Sum_probs=89.8
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
+|.+|+ +|+||||+|+..|+.++++.|+++++++ +.+|.+|+||||+|+..|+ .+++++|+ +.|+++|.+|.+|+
T Consensus 30 vn~~d~-~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~g~--~~~v~~Ll-~~gadvn~~d~~G~ 104 (169)
T 4gpm_A 30 VNASDS-DGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGH--KEVVKLLI-SKGADVNAKDSDGR 104 (169)
T ss_dssp TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC--HHHHHHHH-HTTCCTTCCCTTSC
T ss_pred CCCcCC-CCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHcCC--HHHHHHHH-HCcCCCCCCCCCCC
Confidence 567788 8899999999999999999999888887 7888889999999999998 88888888 67888999999999
Q ss_pred chhHHHHHhhhhc------cchhhhHHHHhhccchHHHHHHHHHHHHHhccCCCCCccC
Q 042220 86 TPLHVLAAVLQKE------KTAVEEGEIKELKPRHTIVATLIATVTFAAGFTLPGGYWG 138 (255)
Q Consensus 86 TpLh~A~~~~~~~------~~~~~~~~~~~~~~~~~vvA~Liatvtf~a~l~~PGg~~~ 138 (255)
||||+|++.++.+ +...+.....+.+++++..|+.-........|-.-|+..+
T Consensus 105 TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 105 TPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163 (169)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-----
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 9999998887665 1111111122334555555554444444444444666654
No 2
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.79 E-value=2.8e-19 Score=127.47 Aligned_cols=81 Identities=31% Similarity=0.373 Sum_probs=75.3
Q ss_pred CCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHH
Q 042220 13 QKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLA 92 (255)
Q Consensus 13 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~ 92 (255)
+|+||||+|++.|+.+++++|++.++++ +.+|.+|+||||+|+..|+ .+++++|+ +.|++++.+|.+|+||||+|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~--~~~v~~Ll-~~ga~~~~~d~~g~t~l~~A~ 76 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGH--LEVVKLLL-EAGADVNAKDKNGRTPLHLAA 76 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC--HHHHHHHH-HTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCCCccCCCCCCHHHHHH
Confidence 4899999999999999999999999998 8899999999999999999 99999999 789999999999999999999
Q ss_pred Hhhhh
Q 042220 93 AVLQK 97 (255)
Q Consensus 93 ~~~~~ 97 (255)
+.++.
T Consensus 77 ~~~~~ 81 (93)
T 1n0q_A 77 RNGHL 81 (93)
T ss_dssp HTTCH
T ss_pred HcCCH
Confidence 98554
No 3
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.78 E-value=1.7e-19 Score=143.61 Aligned_cols=87 Identities=29% Similarity=0.307 Sum_probs=71.2
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
++.+|+ +|+||||+|+++|+.++++.|+++++++ +.+|.+|+||||+|+..|+ .+++++|+ +.|++++.+|.+|+
T Consensus 63 ~~~~d~-~g~TpLh~A~~~g~~~~v~~Ll~~gadv-n~~d~~G~TpLh~A~~~g~--~~~v~~Ll-~~gad~~~~d~~G~ 137 (169)
T 4gpm_A 63 VNAKDS-DGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGH--KEVVKLLI-SKGADVNTSDSDGR 137 (169)
T ss_dssp TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC--HHHHHHHH-HTTCCTTCCCTTSC
T ss_pred hhhhcc-CCCCHHHHHHHcCCHHHHHHHHHCcCCC-CCCCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCccccCCCCC
Confidence 466777 8888888888888888888888888887 7788888888888888888 88888888 67888888888888
Q ss_pred chhHHHHHhhhh
Q 042220 86 TPLHVLAAVLQK 97 (255)
Q Consensus 86 TpLh~A~~~~~~ 97 (255)
||||+|++.++.
T Consensus 138 TpL~~A~~~g~~ 149 (169)
T 4gpm_A 138 TPLDLAREHGNE 149 (169)
T ss_dssp CHHHHHHHTTCH
T ss_pred CHHHHHHHcCCH
Confidence 888888887554
No 4
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.73 E-value=5.2e-18 Score=124.88 Aligned_cols=90 Identities=19% Similarity=0.131 Sum_probs=77.7
Q ss_pred CCcceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCC
Q 042220 3 KSAACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDV 82 (255)
Q Consensus 3 ~~~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~ 82 (255)
|...+..|. +|+||||+|+..|+.+++++|++.++++ +.+|..|+||||+|+..|+ .+++++|+ +.|++++.+|.
T Consensus 14 ~~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~--~~~v~~Ll-~~ga~~~~~d~ 88 (110)
T 2zgd_A 14 VPRGSHMGS-DLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGH--LEVVKLLL-EAGADVXAQDK 88 (110)
T ss_dssp --------C-CHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTC--HHHHHHHH-HTTCCTTCCCT
T ss_pred CCcccccCC-ccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCcccccc
Confidence 345566778 9999999999999999999999999988 7889999999999999999 99999999 67999999999
Q ss_pred CCCchhHHHHHhhhh
Q 042220 83 NGNTPLHVLAAVLQK 97 (255)
Q Consensus 83 ~G~TpLh~A~~~~~~ 97 (255)
+|+||||+|++.++.
T Consensus 89 ~g~tpl~~A~~~~~~ 103 (110)
T 2zgd_A 89 FGKTAFDISIDNGNE 103 (110)
T ss_dssp TSCCHHHHHHHHTCH
T ss_pred CCCcHHHHHHHcCCH
Confidence 999999999998654
No 5
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.72 E-value=6.1e-18 Score=126.53 Aligned_cols=81 Identities=19% Similarity=0.116 Sum_probs=49.1
Q ss_pred CCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHH
Q 042220 13 QKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLA 92 (255)
Q Consensus 13 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~ 92 (255)
.|.||||+|++.|+.++++.|++.++++ +.+|.+|+||||+|+..++ .+++++|+ +.|.+++.+|.+|+||||+|+
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~g~~~~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQ--LEILEFLL-LKGADINAPDKHHITPLLSAV 81 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTC--HHHHHHHH-TTTCCTTCCCTTSCCHHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCC--HHHHHHHH-HcCCCCCcCCCCCCCHHHHHH
Confidence 4556666666666666666666666555 5556666666666666666 66666665 455666666666666666666
Q ss_pred Hhhhh
Q 042220 93 AVLQK 97 (255)
Q Consensus 93 ~~~~~ 97 (255)
..++.
T Consensus 82 ~~~~~ 86 (123)
T 3aaa_C 82 YEGHV 86 (123)
T ss_dssp HHTCH
T ss_pred HcCCH
Confidence 65443
No 6
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.72 E-value=1.1e-17 Score=127.42 Aligned_cols=81 Identities=26% Similarity=0.191 Sum_probs=47.5
Q ss_pred CCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHH
Q 042220 13 QKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLA 92 (255)
Q Consensus 13 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~ 92 (255)
.|.||||+|++.|+.+++++|+++++++ +.+|.+|+||||+|+..++ .+++++|+ +.|.+++.+|.+|+||||+|+
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~ 88 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGH--LEIVEVLL-KNGADVNAVDAIGFTPLHLAA 88 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTC--HHHHHHHH-HTTCCTTCCCTTCCCHHHHHH
T ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCCCcCCCCCCCHHHHHH
Confidence 4555666666666666666666655555 4555556666666666666 56666555 445556666666666666666
Q ss_pred Hhhhh
Q 042220 93 AVLQK 97 (255)
Q Consensus 93 ~~~~~ 97 (255)
+.++.
T Consensus 89 ~~~~~ 93 (136)
T 2jab_A 89 FIGHL 93 (136)
T ss_dssp HHTCH
T ss_pred HcCCH
Confidence 55443
No 7
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.72 E-value=4e-17 Score=124.21 Aligned_cols=84 Identities=24% Similarity=0.300 Sum_probs=78.8
Q ss_pred eecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCch
Q 042220 8 ISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTP 87 (255)
Q Consensus 8 ~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~Tp 87 (255)
.+|+ +|+||||+|+..|+.+++++|++.++++ +.+|..|+||||+|+..++ .+++++|+ +.|.+++.+|.+|+||
T Consensus 5 ~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~--~~~~~~Ll-~~g~~~~~~~~~g~t~ 79 (137)
T 3c5r_A 5 FTNH-RGETLLHIASIKGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGH--LKVVELLL-QHKALVNTTGYQNDSP 79 (137)
T ss_dssp CCCT-TCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTC--HHHHHHHH-HTTCCTTCCCGGGCCH
T ss_pred CcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCcccCcCCCCCCH
Confidence 4677 9999999999999999999999999998 8899999999999999999 99999999 7899999999999999
Q ss_pred hHHHHHhhh
Q 042220 88 LHVLAAVLQ 96 (255)
Q Consensus 88 Lh~A~~~~~ 96 (255)
||+|++.++
T Consensus 80 L~~A~~~~~ 88 (137)
T 3c5r_A 80 LHDAAKNGH 88 (137)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHcCC
Confidence 999999843
No 8
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.72 E-value=4.7e-18 Score=134.14 Aligned_cols=90 Identities=21% Similarity=0.147 Sum_probs=81.6
Q ss_pred CCcceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCC
Q 042220 3 KSAACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDV 82 (255)
Q Consensus 3 ~~~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~ 82 (255)
+..++.+|. +|+||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+..++ .+++++|+ +.|.+++.+|.
T Consensus 26 ~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~g~~~~~~~~ 100 (172)
T 3v30_A 26 DNLVNKPDE-RGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLASTGGY--TDIVGLLL-ERDVDINIYDW 100 (172)
T ss_dssp SGGGGCCCT-TSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTC--HHHHHHHH-TTTCCTTCCCT
T ss_pred cccccCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHHCCC--HHHHHHHH-HcCCCCCCCCC
Confidence 345678888 9999999999999999999999999988 7889999999999999999 99999998 78999999999
Q ss_pred CCCchhHHHHHhhhh
Q 042220 83 NGNTPLHVLAAVLQK 97 (255)
Q Consensus 83 ~G~TpLh~A~~~~~~ 97 (255)
+|+||||+|++.++.
T Consensus 101 ~g~t~L~~A~~~~~~ 115 (172)
T 3v30_A 101 NGGTPLLYAVRGNHV 115 (172)
T ss_dssp TSCCHHHHHHHTTCH
T ss_pred CCCCHHHHHHHcCCH
Confidence 999999999988554
No 9
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.71 E-value=8.1e-17 Score=128.03 Aligned_cols=89 Identities=20% Similarity=0.178 Sum_probs=80.2
Q ss_pred CCcceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCC
Q 042220 3 KSAACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDV 82 (255)
Q Consensus 3 ~~~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~ 82 (255)
+..++.+|. +|+||||+|+..|+.+++++|+++++++ +.+|.+|+||||+|+..|+ .+++++|+ +.|.+++.+|.
T Consensus 29 ~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~g~~~~~~d~ 103 (179)
T 3f6q_A 29 ENDLNQGDD-HGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHLAASHGH--RDIVQKLL-QYKADINAVNE 103 (179)
T ss_dssp TSCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTC--HHHHHHHH-HTTCCTTCCCT
T ss_pred cccccccCC-CCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCCCccCC
Confidence 445677888 9999999999999999999999999888 7889999999999999999 99999998 78999999999
Q ss_pred CCCchhHHHHHhhh
Q 042220 83 NGNTPLHVLAAVLQ 96 (255)
Q Consensus 83 ~G~TpLh~A~~~~~ 96 (255)
+|+||||+|+..++
T Consensus 104 ~g~t~L~~A~~~~~ 117 (179)
T 3f6q_A 104 HGNVPLHYACFWGQ 117 (179)
T ss_dssp TSCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCC
Confidence 99999999998844
No 10
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.71 E-value=5.8e-18 Score=136.11 Aligned_cols=139 Identities=16% Similarity=0.085 Sum_probs=99.7
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCC
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNG 84 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G 84 (255)
.++.+|+ +|+||||+|+..|+.+++++|++.++++ +.+|..|+||||+|+..|+ .+++++|+ +.|.+++.+|.+|
T Consensus 27 ~~n~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~g~~~~~~~~~g 101 (192)
T 2rfm_A 27 LRNYRDS-YNRTPLMVACMLGMENAIDKLVENFDKL-EDKDIEGSTALIWAVKNNR--LGIAEKLL-SKGSNVNTKDFSG 101 (192)
T ss_dssp HHTCCCT-TCCCHHHHHHHHTCGGGHHHHHHHHCCT-TCCCTTSCCHHHHHHHTTC--HHHHHHHH-HHTCCTTCCCTTS
T ss_pred HHhCcCC-CCCCHHHHHHHcCCHHHHHHHHHhcccc-ccccccCccHHHHHHHcCC--HHHHHHHH-HCCCCCCCCCCCC
Confidence 3567888 9999999999999999999999999887 7889999999999999999 99999998 7789999999999
Q ss_pred CchhHHHHHhhhhc------cchhhhHHHHhhccchHHHHHHHHHHHHHhccCCCCCccCCCCCCCcccc
Q 042220 85 NTPLHVLAAVLQKE------KTAVEEGEIKELKPRHTIVATLIATVTFAAGFTLPGGYWGKEGPIPGTSI 148 (255)
Q Consensus 85 ~TpLh~A~~~~~~~------~~~~~~~~~~~~~~~~~vvA~Liatvtf~a~l~~PGg~~~~~~~~~g~~~ 148 (255)
+||||+|+..++.+ +...........++++++.|+.-........+-.-|...+..+..+.+|+
T Consensus 102 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l 171 (192)
T 2rfm_A 102 KTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAE 171 (192)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence 99999999986654 11001011122345555555554433333333334554444334444554
No 11
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.71 E-value=4.5e-18 Score=129.58 Aligned_cols=87 Identities=17% Similarity=0.126 Sum_probs=80.4
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCC-
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVN- 83 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~- 83 (255)
.++.+|+ +|+||||+|++.|+.+++++|+++++++ +.+|..|+||||+|+. ++ .+++++|+ +.|.+++.+|.+
T Consensus 4 ~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~-~~--~~~v~~Ll-~~g~~~~~~~~~~ 77 (136)
T 1d9s_A 4 GIHMLGG-SSDAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMM-GS--AQVAELLL-LHGAEPNCADPAT 77 (136)
T ss_dssp CCSCCCC-CCSCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTT-SC--HHHHHHHH-HHTCCSSCCBTTT
T ss_pred CccCCCC-CCccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHc-CC--HHHHHHHH-HCCCCCCCcCCCC
Confidence 4577888 9999999999999999999999999988 7899999999999999 99 99999999 789999999999
Q ss_pred CCchhHHHHHhhhh
Q 042220 84 GNTPLHVLAAVLQK 97 (255)
Q Consensus 84 G~TpLh~A~~~~~~ 97 (255)
|+||||+|++.++.
T Consensus 78 g~t~L~~A~~~~~~ 91 (136)
T 1d9s_A 78 LTRPVHDAAREGFL 91 (136)
T ss_dssp TBCHHHHHHHHTCH
T ss_pred CCCHHHHHHHcCCH
Confidence 99999999998443
No 12
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.71 E-value=1.1e-17 Score=142.42 Aligned_cols=142 Identities=15% Similarity=0.080 Sum_probs=107.5
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCC
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNG 84 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G 84 (255)
.+|.+|+ +|+||||+|+..|+.+++++|++.++++ +.++.+|+||+|.|+..++ .++++.|+ +.|+++|.+|.+|
T Consensus 78 dvn~~d~-~G~TpLh~A~~~g~~~~v~~Ll~~~a~~-~~~~~~g~t~l~~a~~~~~--~~~~~~Ll-~~g~~~n~~d~~g 152 (269)
T 4b93_B 78 GVNVTSQ-DGSSPLHVAALHGRADLIPLLLKHGANA-GARNADQAVPLHLACQQGH--FQVVKCLL-DSNAKPNKKDLSG 152 (269)
T ss_dssp CTTCCCT-TSCCHHHHHHHTTCTTHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTC--HHHHHHHH-HTTCCSCCCCTTC
T ss_pred CCCCcCC-CCCCHHHHHHHcCcHHHHHHHHhcCCCc-CccCCCCCCccccccccCh--HHHHHHHH-HCCCCCCCCCCCC
Confidence 3577889 9999999999999999999999999998 7889999999999999999 99999998 7899999999999
Q ss_pred CchhHHHHHhhhhc------cchhhhHHHHhhccchHHHHHHHHHHHHHhccCCCCCccCCCCCCCccccccC
Q 042220 85 NTPLHVLAAVLQKE------KTAVEEGEIKELKPRHTIVATLIATVTFAAGFTLPGGYWGKEGPIPGTSILIK 151 (255)
Q Consensus 85 ~TpLh~A~~~~~~~------~~~~~~~~~~~~~~~~~vvA~Liatvtf~a~l~~PGg~~~~~~~~~g~~~~~~ 151 (255)
+||||+|++.++.+ +...........++++++.|+.-........|-.-|...+..+.++.||+...
T Consensus 153 ~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A 225 (269)
T 4b93_B 153 NTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCA 225 (269)
T ss_dssp CCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGS
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence 99999999997765 11111111222345555555544444444444446666665666677888744
No 13
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.71 E-value=1.2e-16 Score=125.09 Aligned_cols=86 Identities=26% Similarity=0.225 Sum_probs=72.1
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCC
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNG 84 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G 84 (255)
..+..|. +|+||||+|+..|+.+++++|+++++++ +.+|.+|+||||+|+..|+ .+++++|+ +.|.+++.+|.+|
T Consensus 34 ~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~g~~~~~~~~~g 108 (165)
T 3twr_A 34 NCRDIEG-RQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPLHNACSYGH--YEVAELLV-KHGAVVNVADLWK 108 (165)
T ss_dssp TCCCTTT-TCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC--HHHHHHHH-HTTCCTTCCCTTC
T ss_pred Ccccccc-CCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCHHHHHHHcCc--HHHHHHHH-hCCCCCCCcCCCC
Confidence 3445566 7888899988888888888888888887 7788888889999888888 88888888 6788888888888
Q ss_pred CchhHHHHHhh
Q 042220 85 NTPLHVLAAVL 95 (255)
Q Consensus 85 ~TpLh~A~~~~ 95 (255)
+||||+|++.+
T Consensus 109 ~t~L~~A~~~~ 119 (165)
T 3twr_A 109 FTPLHEAAAKG 119 (165)
T ss_dssp CCHHHHHHHTT
T ss_pred CCHHHHHHHcC
Confidence 89988888873
No 14
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.70 E-value=8.6e-17 Score=120.18 Aligned_cols=85 Identities=14% Similarity=0.049 Sum_probs=79.5
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCC
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNG 84 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G 84 (255)
.++.+|+ +|+||||+|+..|+.+++++|+++++++ +.+|.+|+||||+|+..++ .+++++|+ +.|++++.+|.+|
T Consensus 32 ~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~tpL~~A~~~~~--~~~v~~Ll-~~ga~~~~~~~~g 106 (123)
T 3aaa_C 32 DVNRTLE-GGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLSAVYEGH--VSCVKLLL-SKGADKTVKGPDG 106 (123)
T ss_dssp CTTSCCT-TSSCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHHTC--HHHHHHHH-HTTCCTTCCCTTS
T ss_pred CcCccCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCCCCcCCCC
Confidence 3567888 9999999999999999999999999998 8899999999999999999 99999999 7799999999999
Q ss_pred CchhHHHHHh
Q 042220 85 NTPLHVLAAV 94 (255)
Q Consensus 85 ~TpLh~A~~~ 94 (255)
+||||+|...
T Consensus 107 ~t~l~~A~~~ 116 (123)
T 3aaa_C 107 LTAFEATDNQ 116 (123)
T ss_dssp CCHHHHCCCH
T ss_pred CCHHHHhCCH
Confidence 9999999665
No 15
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.70 E-value=3.9e-17 Score=130.68 Aligned_cols=88 Identities=24% Similarity=0.243 Sum_probs=71.1
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccc-cCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCC
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVD-ERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVN 83 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d-~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~ 83 (255)
.++.+|+ +|+||||+|+..|+.+++++|+++++++ +.+| .+|+||||+|+..|+ .+++++|+ +.|++++.+|.+
T Consensus 68 ~~~~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~A~~~~~--~~~v~~Ll-~~ga~~~~~d~~ 142 (183)
T 3deo_A 68 DVDAVDE-NGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMAAGYVR--PEVVEALV-ELGADIEVEDER 142 (183)
T ss_dssp CTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSSCCHHHHHHHTTC--HHHHHHHH-HHTCCTTCCCTT
T ss_pred CCCCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHHhcCc--HHHHHHHH-HcCCCCcCCCCC
Confidence 3566777 8888888888888888888888888887 5566 778888888888888 88888888 678888888888
Q ss_pred CCchhHHHHHhhhh
Q 042220 84 GNTPLHVLAAVLQK 97 (255)
Q Consensus 84 G~TpLh~A~~~~~~ 97 (255)
|+||||+|++.++.
T Consensus 143 g~tpl~~A~~~~~~ 156 (183)
T 3deo_A 143 GLTALELAREILKT 156 (183)
T ss_dssp SCCHHHHHHHHHHT
T ss_pred CCCHHHHHHHhccC
Confidence 88888888887554
No 16
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.70 E-value=2.1e-17 Score=125.75 Aligned_cols=88 Identities=19% Similarity=0.139 Sum_probs=81.5
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCC
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNG 84 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G 84 (255)
.++.+|+ +|+||||+|+..|+.+++++|+++++++ +.+|.+|+||||+|+..++ .+++++|+ +.|++++.+|.+|
T Consensus 35 ~~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~ga~~~~~~~~g 109 (137)
T 3c5r_A 35 DPNVKDH-AGWTPLHEACNHGHLKVVELLLQHKALV-NTTGYQNDSPLHDAAKNGH--VDIVKLLL-SYGASRNAVNIFG 109 (137)
T ss_dssp CSCCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCGGGCCHHHHHHHTTC--HHHHHHHH-HTTCCTTCCCTTS
T ss_pred CCCcCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCcc-cCcCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCCCCCCCCC
Confidence 3567888 9999999999999999999999999998 8899999999999999999 99999999 7899999999999
Q ss_pred CchhHHHHHhhhh
Q 042220 85 NTPLHVLAAVLQK 97 (255)
Q Consensus 85 ~TpLh~A~~~~~~ 97 (255)
+||||+|+..++.
T Consensus 110 ~tpl~~A~~~~~~ 122 (137)
T 3c5r_A 110 LRPVDYTDDESMK 122 (137)
T ss_dssp CCGGGGCCCHHHH
T ss_pred CCHHHHHhhccHH
Confidence 9999999987543
No 17
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.70 E-value=1.9e-17 Score=122.23 Aligned_cols=85 Identities=24% Similarity=0.252 Sum_probs=79.5
Q ss_pred eecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCch
Q 042220 8 ISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTP 87 (255)
Q Consensus 8 ~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~Tp 87 (255)
.+|+ +|+||||+|+..|+.++++.|+++++++ +.+|..|+||||+|+..++ .+++++|+ +.|.+++.+|.+|+||
T Consensus 4 ~~d~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~--~~~~~~Ll-~~g~~~~~~d~~g~tp 78 (115)
T 2l6b_A 4 WGSK-DGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGH--AEIVKLLL-AKGADVNARSKDGNTP 78 (115)
T ss_dssp CCSC-SSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTC--HHHHHHHT-TTTCCTTCCCTTCCCT
T ss_pred ccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCc--HHHHHHHH-HcCCCCcccCCCCCCH
Confidence 4678 9999999999999999999999999998 8899999999999999999 99999999 7899999999999999
Q ss_pred hHHHHHhhhh
Q 042220 88 LHVLAAVLQK 97 (255)
Q Consensus 88 Lh~A~~~~~~ 97 (255)
||+|++.++.
T Consensus 79 l~~A~~~~~~ 88 (115)
T 2l6b_A 79 EHLAKKNGHH 88 (115)
T ss_dssp THHHHTTTCH
T ss_pred HHHHHHCCCH
Confidence 9999998543
No 18
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.70 E-value=1.2e-17 Score=142.36 Aligned_cols=85 Identities=15% Similarity=0.122 Sum_probs=57.6
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
++.+|. +|+||||+|++.|+.++++.|+++++++ +.+|.+|+||||+|+..|+ .+++++|+ +.|++++.+|.+|+
T Consensus 145 ~n~~d~-~g~TpL~~A~~~g~~~~v~~Ll~~gadv-n~~~~~g~t~Lh~A~~~g~--~~~v~~Ll-~~Gad~~~~d~~G~ 219 (269)
T 4b93_B 145 PNKKDL-SGNTPLIYACSGGHHELVALLLQHGASI-NASNNKGNTALHEAVIEKH--VFVVELLL-LHGASVQVLNKRQR 219 (269)
T ss_dssp SCCCCT-TCCCHHHHHHHTTCGGGHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTC--HHHHHHHH-HTTCCSCCCCTTSC
T ss_pred CCCCCC-CCCCHHHHHHHCCCHHHHHHHHHCCCCC-CccccCCCcHHHHHHHcCC--HHHHHHHH-HCCCCCCCcCCCCC
Confidence 345566 6677777777777777777777766666 5666667777777777777 67777666 56667777777777
Q ss_pred chhHHHHHhh
Q 042220 86 TPLHVLAAVL 95 (255)
Q Consensus 86 TpLh~A~~~~ 95 (255)
||||+|++++
T Consensus 220 TpL~~A~~~~ 229 (269)
T 4b93_B 220 TAVDCAEQNS 229 (269)
T ss_dssp CSGGGSCTTC
T ss_pred CHHHHHHhCC
Confidence 7777766553
No 19
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.70 E-value=3.5e-17 Score=126.85 Aligned_cols=85 Identities=19% Similarity=0.138 Sum_probs=76.8
Q ss_pred ecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchh
Q 042220 9 SDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPL 88 (255)
Q Consensus 9 ~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpL 88 (255)
+|. .|+||||+|+..|+.+++++|++.++++ +.+|..|+||||+|+..|+ .+++++|+ +.|.+++.+|.+|+|||
T Consensus 30 ~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~g~~~~~~~~~g~t~L 104 (153)
T 1awc_B 30 TDW-LGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASEGH--ANIVEVLL-KHGADVNAKDMLKMTAL 104 (153)
T ss_dssp CCT-TCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHTC--HHHHHHHH-TTTCCTTCCCTTSCCHH
T ss_pred cCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCh--HHHHHHHH-HcCCCCCCCCCCCCCHH
Confidence 466 8999999999999999999999999888 7889999999999999999 99999998 77999999999999999
Q ss_pred HHHHHhhhhc
Q 042220 89 HVLAAVLQKE 98 (255)
Q Consensus 89 h~A~~~~~~~ 98 (255)
|+|++.++.+
T Consensus 105 ~~A~~~~~~~ 114 (153)
T 1awc_B 105 HWATEHNHQE 114 (153)
T ss_dssp HHHHHTTCHH
T ss_pred HHHHHcCCHH
Confidence 9999987655
No 20
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.69 E-value=1.2e-17 Score=127.15 Aligned_cols=87 Identities=9% Similarity=-0.007 Sum_probs=80.8
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccC-CchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCC
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDER-GWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVN 83 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~-G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~ 83 (255)
.++.+|+ +|+||||+|+. |+.+++++|+++++++ +.+|.+ |+||||+|+..|+ .+++++|+ +.|++++.+|.+
T Consensus 37 ~~~~~~~-~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~ga~~~~~d~~ 110 (136)
T 1d9s_A 37 DPNALNR-FGRRPIQVMMM-GSAQVAELLLLHGAEP-NCADPATLTRPVHDAAREGF--LDTLVVLH-RAGARLDVCDAW 110 (136)
T ss_dssp CTTCCCT-TCCTTTTTSTT-SCHHHHHHHHHHTCCS-SCCBTTTTBCHHHHHHHHTC--HHHHHHHH-HTCCCCCCCSSS
T ss_pred CcCCcCC-CCCCHHHHHHc-CCHHHHHHHHHCCCCC-CCcCCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCCCccCCC
Confidence 3567788 99999999999 9999999999999998 889999 9999999999999 99999999 789999999999
Q ss_pred CCchhHHHHHhhhh
Q 042220 84 GNTPLHVLAAVLQK 97 (255)
Q Consensus 84 G~TpLh~A~~~~~~ 97 (255)
|+||||+|++.++.
T Consensus 111 g~tpl~~A~~~~~~ 124 (136)
T 1d9s_A 111 GRLPVDLAEEQGHR 124 (136)
T ss_dssp SSCHHHHHHHHTCH
T ss_pred CCCHHHHHHHcCCH
Confidence 99999999998553
No 21
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.69 E-value=4.9e-17 Score=127.65 Aligned_cols=84 Identities=23% Similarity=0.240 Sum_probs=48.1
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
++.+|+ +|+||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+..|+ .+++++|+ +.|.+++.+|.+|+
T Consensus 29 ~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~g~~~~~~~~~g~ 103 (167)
T 3v31_A 29 INHTDE-EGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRESALSLACSKGY--TDIVKMLL-DCGVDVNEYDWNGG 103 (167)
T ss_dssp TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTC--HHHHHHHH-HHTCCTTCCCTTSC
T ss_pred cCCCCC-CCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCC--HHHHHHHH-HCCCCCCcCCCCCC
Confidence 344555 5555555555555555555555555554 4555555555555555555 55555555 45555555555555
Q ss_pred chhHHHHHh
Q 042220 86 TPLHVLAAV 94 (255)
Q Consensus 86 TpLh~A~~~ 94 (255)
||||+|+..
T Consensus 104 t~L~~A~~~ 112 (167)
T 3v31_A 104 TPLLYAVHG 112 (167)
T ss_dssp CHHHHHHHT
T ss_pred CHHHHHHHc
Confidence 555555555
No 22
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.69 E-value=4.2e-17 Score=126.43 Aligned_cols=79 Identities=20% Similarity=0.142 Sum_probs=53.0
Q ss_pred CcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHHHh
Q 042220 15 MTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLAAV 94 (255)
Q Consensus 15 ~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~~~ 94 (255)
.+|||.|++.|+.+++++|++++++. + .|..|+||||+|+..|+ .+++++|+ +.|.+++.+|.+|+||||+|+..
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~-~-~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~ 77 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPF-T-TDWLGTSPLHLAAQYGH--FSTTEVLL-RAGVSRDARTKVDRTPLHMAASE 77 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCC-C-CCTTCCCHHHHHHHHTC--HHHHHHHH-TTTCCTTCCCTTCCCHHHHHHHH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCC-C-cCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHc
Confidence 46677777777777777777766654 2 46667777777777777 77777666 56666777777777777777766
Q ss_pred hhhc
Q 042220 95 LQKE 98 (255)
Q Consensus 95 ~~~~ 98 (255)
++.+
T Consensus 78 ~~~~ 81 (153)
T 1awc_B 78 GHAN 81 (153)
T ss_dssp TCHH
T ss_pred ChHH
Confidence 5543
No 23
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.69 E-value=5.3e-17 Score=125.91 Aligned_cols=88 Identities=16% Similarity=0.073 Sum_probs=73.7
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCC
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNG 84 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G 84 (255)
.++.+|+ +|+||||+ +..|+.+++++|+++++++ +.+|..|+||||+|+..|+ .+++++|+ +.|.+++.+|.+|
T Consensus 28 ~~~~~~~-~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~g~~~~~~~~~g 101 (156)
T 1bd8_A 28 HPDALNR-FGKTALQV-MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAARTGF--LDTLKVLV-EHGADVNVPDGTG 101 (156)
T ss_dssp CTTCCCT-TSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC--HHHHHHHH-HTTCCSCCCCTTS
T ss_pred CccccCC-CCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCc--HHHHHHHH-HcCCCCCCcCCCC
Confidence 4566777 88888888 8888888888888888887 7788888888888888888 88888888 6788888888888
Q ss_pred CchhHHHHHhhhhc
Q 042220 85 NTPLHVLAAVLQKE 98 (255)
Q Consensus 85 ~TpLh~A~~~~~~~ 98 (255)
+||||+|++.++.+
T Consensus 102 ~t~L~~A~~~~~~~ 115 (156)
T 1bd8_A 102 ALPIHLAVQEGHTA 115 (156)
T ss_dssp CCHHHHHHHHTCHH
T ss_pred CcHHHHHHHhChHH
Confidence 88888888886654
No 24
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.69 E-value=4.8e-17 Score=133.93 Aligned_cols=91 Identities=29% Similarity=0.359 Sum_probs=82.9
Q ss_pred CCcceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCC
Q 042220 3 KSAACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDV 82 (255)
Q Consensus 3 ~~~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~ 82 (255)
+...+.+|. +|+||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+..|+ .+++++|+ +.|.+++.+|.
T Consensus 30 ~~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~g~~~~~~~~ 104 (231)
T 3aji_A 30 KSLATRTDQ-DSRTALHWACSAGHTEIVEFLLQLGVPV-NDKDDAGWSPLHIAASAGX--DEIVKALL-VKGAHVNAVNQ 104 (231)
T ss_dssp GGGGGCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTC--HHHHHHHH-HTTCCTTCCCT
T ss_pred hhhhhcCCC-CCCCHHHHHHHcCcHHHHHHHHHhCCCC-CCcCCCCCCHHHHHHHcCH--HHHHHHHH-HcCCCCCCCCC
Confidence 455677888 9999999999999999999999999988 7889999999999999999 99999999 78999999999
Q ss_pred CCCchhHHHHHhhhhc
Q 042220 83 NGNTPLHVLAAVLQKE 98 (255)
Q Consensus 83 ~G~TpLh~A~~~~~~~ 98 (255)
+|.||||+|++.++.+
T Consensus 105 ~g~t~L~~A~~~~~~~ 120 (231)
T 3aji_A 105 NGCTPLHYAASKNRHE 120 (231)
T ss_dssp TSCCHHHHHHHTTCHH
T ss_pred CCCCHHHHHHHcCCHH
Confidence 9999999999986654
No 25
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.68 E-value=3.5e-17 Score=131.95 Aligned_cols=90 Identities=16% Similarity=0.069 Sum_probs=82.0
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCC
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNG 84 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G 84 (255)
.++.+|. +|+||||+|++.|+.+++++|+++++++ +.+|..|+||||+|+..|+ .+++++|+++.+.+++.+|.+|
T Consensus 31 ~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~--~~~~~~Ll~~~~~~~~~~~~~g 106 (201)
T 3hra_A 31 QVDEVDT-EGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYAGAQGR--TEILAYMLKHATPDLNKHNRYG 106 (201)
T ss_dssp CTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC--HHHHHHHHHHSCCCTTCCCTTS
T ss_pred CCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCC--HHHHHHHHhccCcccccccCCC
Confidence 5677888 9999999999999999999999999998 7899999999999999999 9999999966778999999999
Q ss_pred CchhHHHHHhhhhc
Q 042220 85 NTPLHVLAAVLQKE 98 (255)
Q Consensus 85 ~TpLh~A~~~~~~~ 98 (255)
+||||+|++.++.+
T Consensus 107 ~t~L~~A~~~~~~~ 120 (201)
T 3hra_A 107 GNALIPAAEKGHID 120 (201)
T ss_dssp CCSHHHHHHTTCHH
T ss_pred CcHHHHHHHcCCHH
Confidence 99999999986654
No 26
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.68 E-value=4.3e-17 Score=126.45 Aligned_cols=85 Identities=16% Similarity=0.212 Sum_probs=58.2
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
++.+|+ +|+||||+|+..|+.+++++|+++++++ +.+|.+|+||||+|+..|+ .+++++|+ +. .+++.+|.+|+
T Consensus 61 ~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~-~~~~~~~~~g~ 134 (156)
T 1bd8_A 61 PNVQDT-SGTSPVHDAARTGFLDTLKVLVEHGADV-NVPDGTGALPIHLAVQEGH--TAVVSFLA-AE-SDLHRRDARGL 134 (156)
T ss_dssp TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTC--HHHHHHHH-TT-SCTTCCCTTSC
T ss_pred CCCcCC-CCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHhCh--HHHHHHHH-hc-cCCCCcCCCCC
Confidence 345566 6777777777777777777777776666 5666777777777777777 77777766 33 66677777777
Q ss_pred chhHHHHHhhh
Q 042220 86 TPLHVLAAVLQ 96 (255)
Q Consensus 86 TpLh~A~~~~~ 96 (255)
||||+|++.++
T Consensus 135 t~l~~A~~~~~ 145 (156)
T 1bd8_A 135 TPLELALQRGA 145 (156)
T ss_dssp CHHHHHHHSCC
T ss_pred CHHHHHHHcCc
Confidence 77777776643
No 27
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.68 E-value=6.2e-17 Score=127.66 Aligned_cols=83 Identities=28% Similarity=0.339 Sum_probs=49.1
Q ss_pred eeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCc
Q 042220 7 CISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNT 86 (255)
Q Consensus 7 ~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~T 86 (255)
+.+|. +|+||||+|++.|+.+++++|+++++++ +.+|.+|+||||+|+..|+ .+++++|+ +.|.+++.+|.+|+|
T Consensus 41 ~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~--~~~~~~Ll-~~g~~~~~~~~~g~t 115 (169)
T 2y1l_E 41 NAEDA-SGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGMTPLRLAALFGH--LEIVEVLL-KNGADVNANDMEGHT 115 (169)
T ss_dssp TCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC--HHHHHHHH-HTTCCTTCCCTTSCC
T ss_pred CCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCCCCCCCCCCC
Confidence 44455 5666666666666666666666655555 4555556666666666666 66666555 455556666666666
Q ss_pred hhHHHHHh
Q 042220 87 PLHVLAAV 94 (255)
Q Consensus 87 pLh~A~~~ 94 (255)
|||+|++.
T Consensus 116 ~L~~A~~~ 123 (169)
T 2y1l_E 116 PLHLAAMF 123 (169)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 66666655
No 28
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.68 E-value=7.3e-17 Score=138.10 Aligned_cols=87 Identities=18% Similarity=0.249 Sum_probs=80.9
Q ss_pred ceeecCCCCCcHHHHHHHc---ChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCC
Q 042220 6 ACISDNDQKMTALLLAAGR---GHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDV 82 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~ 82 (255)
++..|+ .|+||||+|+.. |+.+++++|+++++++ +.+|.+|+||||+|+..|+ .+++++|+ +.|++++.+|.
T Consensus 162 l~~~~~-~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-n~~d~~g~TpLh~A~~~g~--~~~v~~Ll-~~gad~~~~d~ 236 (278)
T 1dcq_A 162 LANGHE-PDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGSTALHYCCLTDN--AECLKLLL-RGKASIEIANE 236 (278)
T ss_dssp CSSCSS-TTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCCHHHHHHHTTC--HHHHHHHH-HTTCCTTCCCT
T ss_pred cccccc-CCCCcchHHHHhcccchHHHHHHHHHCCCCc-cccCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCCCCccC
Confidence 455678 899999999999 8999999999999998 8899999999999999999 99999999 78999999999
Q ss_pred CCCchhHHHHHhhhh
Q 042220 83 NGNTPLHVLAAVLQK 97 (255)
Q Consensus 83 ~G~TpLh~A~~~~~~ 97 (255)
+|+||||+|++.++.
T Consensus 237 ~g~tpL~~A~~~~~~ 251 (278)
T 1dcq_A 237 SGETPLDIAKRLKHE 251 (278)
T ss_dssp TSCCHHHHHHHTTCH
T ss_pred CCCCHHHHHHHcCCH
Confidence 999999999998553
No 29
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.68 E-value=7.7e-17 Score=129.49 Aligned_cols=88 Identities=19% Similarity=0.197 Sum_probs=81.0
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
++.+|. +|+||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+..++ .+++++|+ +.|.+++.+|.+|+
T Consensus 61 ~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~g~~~~~~~~~g~ 135 (192)
T 2rfm_A 61 LEDKDI-EGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDFSGKTPLMWSIIFGY--SEMSYFLL-EHGANVNDRNLEGE 135 (192)
T ss_dssp TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTC--HHHHHHHH-HTTCCSSCCCTTCC
T ss_pred cccccc-cCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCC--HHHHHHHH-HCCCCCCCCCCCCC
Confidence 456788 8999999999999999999999999998 7889999999999999999 99999999 78999999999999
Q ss_pred chhHHHHHhhhhc
Q 042220 86 TPLHVLAAVLQKE 98 (255)
Q Consensus 86 TpLh~A~~~~~~~ 98 (255)
||||+|++.++.+
T Consensus 136 t~L~~A~~~~~~~ 148 (192)
T 2rfm_A 136 TPLIVASKYGRSE 148 (192)
T ss_dssp CHHHHHHHHTCHH
T ss_pred CHHHHHHHcCCHH
Confidence 9999999986654
No 30
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.67 E-value=4.4e-17 Score=124.03 Aligned_cols=88 Identities=23% Similarity=0.289 Sum_probs=81.9
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCC
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNG 84 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G 84 (255)
.++.+|+ +|+||||+|+..|+.+++++|+++++++ +.+|.+|+||||+|+..++ .+++++|+ +.|++++.+|.+|
T Consensus 39 ~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~--~~~v~~Ll-~~g~~~~~~~~~g 113 (136)
T 2jab_A 39 DVNAKDE-YGLTPLYLATAHGHLEIVEVLLKNGADV-NAVDAIGFTPLHLAAFIGH--LEIAEVLL-KHGADVNAQDKFG 113 (136)
T ss_dssp CTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTC--HHHHHHHH-HTTCCTTCCCTTS
T ss_pred CCCCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCCcCcCCCC
Confidence 3567888 9999999999999999999999999998 8899999999999999999 99999999 7899999999999
Q ss_pred CchhHHHHHhhhh
Q 042220 85 NTPLHVLAAVLQK 97 (255)
Q Consensus 85 ~TpLh~A~~~~~~ 97 (255)
+||||+|++.++.
T Consensus 114 ~tpl~~A~~~~~~ 126 (136)
T 2jab_A 114 KTAFDISIGNGNE 126 (136)
T ss_dssp CCHHHHHHHTTCH
T ss_pred CCHHHHHHHCCCH
Confidence 9999999998553
No 31
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.67 E-value=1.3e-16 Score=124.42 Aligned_cols=87 Identities=18% Similarity=0.167 Sum_probs=73.9
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
++.+|. +|+||||+|+. |+.+++++|+++++++ +.+|..|+||||+|+..|+ .+++++|+ +.|.+++.+|.+|+
T Consensus 31 ~~~~~~-~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~g~~~~~~~~~g~ 104 (162)
T 1ihb_A 31 VNAQNG-FGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDAARAGF--LDTLQTLL-EFQADVNIEDNEGN 104 (162)
T ss_dssp TTCCCT-TSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTC--HHHHHHHH-HTTCCTTCCCTTSC
T ss_pred ccccCc-cCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCCCCcCCCCC
Confidence 466777 88899999888 8899999999888887 7788889999999999888 88888888 67888888888899
Q ss_pred chhHHHHHhhhhc
Q 042220 86 TPLHVLAAVLQKE 98 (255)
Q Consensus 86 TpLh~A~~~~~~~ 98 (255)
||||+|++.++.+
T Consensus 105 t~L~~A~~~~~~~ 117 (162)
T 1ihb_A 105 LPLHLAAKEGHLR 117 (162)
T ss_dssp CHHHHHHHTTCHH
T ss_pred CHHHHHHHcCCHH
Confidence 9999988886654
No 32
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.67 E-value=2.6e-17 Score=128.27 Aligned_cols=136 Identities=15% Similarity=0.014 Sum_probs=92.5
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
....++ .|.||||+|++.|+.+++++|+++++++ +.+|..|+||||+|+ .|+ .+++++|+ +.|.+++.+|.+|+
T Consensus 5 ~~~~~~-~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~-~~~--~~~v~~Ll-~~g~~~~~~d~~g~ 78 (156)
T 1bi7_B 5 AGSSME-PSADWLATAAARGRVEEVRALLEAGANP-NAPNSYGRRPIQVMM-MGS--ARVAELLL-LHGAEPNCADPATL 78 (156)
T ss_dssp -----C-CSTTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCSSSCCTTTSSC-TTC--HHHHHHHH-TTTCCCCCCCTTTC
T ss_pred ccCCCc-cchHHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH-cCC--HHHHHHHH-HcCCCCCCcCCCCC
Confidence 345677 8999999999999999999999999887 788999999999985 888 99999999 77999999999999
Q ss_pred c-hhHHHHHhhhhc------cchhhhHHHHhhccchHHHHHHHHHHHHHhccCCCCCccCCCCCCCccc
Q 042220 86 T-PLHVLAAVLQKE------KTAVEEGEIKELKPRHTIVATLIATVTFAAGFTLPGGYWGKEGPIPGTS 147 (255)
Q Consensus 86 T-pLh~A~~~~~~~------~~~~~~~~~~~~~~~~~vvA~Liatvtf~a~l~~PGg~~~~~~~~~g~~ 147 (255)
| |||+|++.++.+ +...........+++.+..|+.-........|...|...+..+..+-+|
T Consensus 79 ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~ 147 (156)
T 1bi7_B 79 TRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDA 147 (156)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-------------
T ss_pred cHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcc
Confidence 9 999999986654 1100001112345667777776666666666666666654443333333
No 33
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.66 E-value=1.6e-16 Score=125.30 Aligned_cols=88 Identities=18% Similarity=0.172 Sum_probs=82.1
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
++.+|+ +|+||||+|+..|+.+++++|+++++++ +.+|.+|+||||+|+..|+ .+++++|+ +.|++++.+|.+|+
T Consensus 62 ~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~ga~~~~~~~~g~ 136 (172)
T 3v30_A 62 PHILAK-ERESALSLASTGGYTDIVGLLLERDVDI-NIYDWNGGTPLLYAVRGNH--VKCVEALL-ARGADLTTEADSGY 136 (172)
T ss_dssp TTCCCT-TCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTC--HHHHHHHH-HTTCCTTCCCTTSC
T ss_pred chhhcc-cCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCccccCCCCC
Confidence 566788 9999999999999999999999999998 8899999999999999999 99999999 78999999999999
Q ss_pred chhHHHHHhhhhc
Q 042220 86 TPLHVLAAVLQKE 98 (255)
Q Consensus 86 TpLh~A~~~~~~~ 98 (255)
||||+|++.++.+
T Consensus 137 t~l~~A~~~~~~~ 149 (172)
T 3v30_A 137 TPMDLAVALGYRK 149 (172)
T ss_dssp CHHHHHHHHTCHH
T ss_pred CHHHHHHHhCcHH
Confidence 9999999986543
No 34
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.66 E-value=1.9e-16 Score=117.66 Aligned_cols=80 Identities=31% Similarity=0.375 Sum_probs=47.3
Q ss_pred CCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHHH
Q 042220 14 KMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLAA 93 (255)
Q Consensus 14 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~~ 93 (255)
|+||||+|++.|+.+++++|+++++++ +.+|..|+||||+|+..++ .+++++|+ +.+.+++.+|.+|+||||+|++
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~--~~~~~~Ll-~~g~~~~~~~~~g~t~l~~A~~ 77 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGH--LEVVKLLL-EAGADVNAKDKNGRTPLHLAAR 77 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTC--HHHHHHHH-HTTCCTTCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCc--HHHHHHHH-HcCCCCcccCCCCCcHHHHHHH
Confidence 556666666666666666666665555 4555556666666666666 66666555 4555566666666666666665
Q ss_pred hhhh
Q 042220 94 VLQK 97 (255)
Q Consensus 94 ~~~~ 97 (255)
.++.
T Consensus 78 ~~~~ 81 (126)
T 1n0r_A 78 NGHL 81 (126)
T ss_dssp TTCH
T ss_pred cChH
Confidence 5443
No 35
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.66 E-value=1.5e-16 Score=133.53 Aligned_cols=140 Identities=19% Similarity=0.174 Sum_probs=99.7
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
.+..|+ +|+||||+|++.|+.++++.|+++++++ +.+|.+|+||||+|+..|+ .+++++|++....+++.+|.+|.
T Consensus 50 ~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~--~~~v~~Ll~~~~~~~~~~~~~g~ 125 (253)
T 1yyh_A 50 HNQTDR-TGETALHLAARYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVSADA--QGVFQILIRNRATDLDARMHDGT 125 (253)
T ss_dssp --CCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTC--HHHHHHHHHSTTSCTTCCCTTCC
T ss_pred ccccCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCC--HHHHHHHHHcCCCCccccCCCCC
Confidence 345678 9999999999999999999999999998 8899999999999999999 99999999433348999999999
Q ss_pred chhHHHHHhhhhc------cchhhhHHHHhhccchHHHHHHHHHHHHHhccCCCCCccCCCCCCCccccc
Q 042220 86 TPLHVLAAVLQKE------KTAVEEGEIKELKPRHTIVATLIATVTFAAGFTLPGGYWGKEGPIPGTSIL 149 (255)
Q Consensus 86 TpLh~A~~~~~~~------~~~~~~~~~~~~~~~~~vvA~Liatvtf~a~l~~PGg~~~~~~~~~g~~~~ 149 (255)
||||+|++.++.+ +...+.....+.+++.++.|+.-........+-.-|...+..+.++.+|+.
T Consensus 126 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~ 195 (253)
T 1yyh_A 126 TPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLF 195 (253)
T ss_dssp CHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred cHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 9999999987654 111111111223455565555544444444444455554444444455543
No 36
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.66 E-value=9.2e-17 Score=137.48 Aligned_cols=139 Identities=14% Similarity=0.024 Sum_probs=102.8
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCC
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNG 84 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G 84 (255)
..+.+|. +|+||||+|+..|+.++++.|++.++++ +.+|.+|+||||+|+..|+ .+++++|+ +.|++++.+|.+|
T Consensus 51 ~~~~~~~-~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~--~~~v~~Ll-~~ga~~~~~~~~g 125 (285)
T 3d9h_A 51 PLMGDAV-SDWSPMHEAAIHGHQLSLRNLISQGWAV-NIITADHVSPLHEACLGGH--LSCVKILL-KHGAQVNGVTADW 125 (285)
T ss_dssp TTCSSSC-CSCCHHHHHHHTTCHHHHHHHHHTTCCS-CEECTTCCCHHHHHHHTTC--HHHHHHHH-HTTCCSSCCCTTC
T ss_pred cccCCCc-cCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHCCc--HHHHHHHH-HCCCCCCCCCCCC
Confidence 3566788 9999999999999999999999999998 8899999999999999999 99999999 7799999999999
Q ss_pred CchhHHHHHhhhhc------cchhhhHHHHhhccchHHHHHHHHHHHHHhccCCCCCccCCCCCCCccccc
Q 042220 85 NTPLHVLAAVLQKE------KTAVEEGEIKELKPRHTIVATLIATVTFAAGFTLPGGYWGKEGPIPGTSIL 149 (255)
Q Consensus 85 ~TpLh~A~~~~~~~------~~~~~~~~~~~~~~~~~vvA~Liatvtf~a~l~~PGg~~~~~~~~~g~~~~ 149 (255)
+||||+|+..++.+ +.... ...++.+++.+..|+.-........+-..|...+..+.++.+|+.
T Consensus 126 ~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~ 195 (285)
T 3d9h_A 126 HTPLFNACVSGSWDCVNLLLQHGAS-VQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLY 195 (285)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC-SSCSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHH
T ss_pred CCHHHHHHHcCHHHHHHHHHHCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 99999999987654 00000 001122445555555444444444443355554444444555554
No 37
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.66 E-value=1.8e-16 Score=135.16 Aligned_cols=87 Identities=24% Similarity=0.243 Sum_probs=69.8
Q ss_pred eeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCc
Q 042220 7 CISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNT 86 (255)
Q Consensus 7 ~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~T 86 (255)
+..|. .|+||||+|+..|+.++++.|++.++++ +.+|.+|+||||+|+..|+ .+++++|++..|++++.+|.+|+|
T Consensus 177 ~~~~~-~g~tpLh~A~~~g~~~~v~~Ll~~gad~-n~~d~~G~TpLh~A~~~g~--~~iv~~Ll~~~gad~~~~d~~g~T 252 (276)
T 4hbd_A 177 AKASQ-AGQTALMLAVSHGRVDVVKALLACEADV-NVQDDDGSTALMCACEHGH--KEIAGLLLAVPSCDISLTDRDGST 252 (276)
T ss_dssp CCCTT-TCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTC--HHHHHHHHTSTTCCTTCCCTTSCC
T ss_pred cccCC-CCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHCCC--HHHHHHHHhcCCCCCcCcCCCCCC
Confidence 44566 7888888888888888888888888887 7788888888888888888 888888884378888888888888
Q ss_pred hhHHHHHhhhh
Q 042220 87 PLHVLAAVLQK 97 (255)
Q Consensus 87 pLh~A~~~~~~ 97 (255)
|||+|++.++.
T Consensus 253 pL~~A~~~g~~ 263 (276)
T 4hbd_A 253 ALMVALDAGQS 263 (276)
T ss_dssp HHHHHHHHTCH
T ss_pred HHHHHHHcCCH
Confidence 88888887554
No 38
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.66 E-value=7.5e-17 Score=136.24 Aligned_cols=89 Identities=17% Similarity=0.107 Sum_probs=75.5
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCc--ccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDC--CKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVN 83 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~--~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~ 83 (255)
++.+|+ +|+||||+|++.|+.+++++|++.+++. .+.+|..|+||||+|+..|+ .+++++|+ +.|++++.+|.+
T Consensus 2 ~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~--~~~v~~Ll-~~ga~~~~~~~~ 77 (282)
T 1oy3_D 2 FGYVTE-DGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGE--ASTVEKLY-AAGAGVLVAERG 77 (282)
T ss_dssp CCCCCT-TCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTC--HHHHHHHH-HTTCCSSCCCTT
T ss_pred CCccCC-CCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCCCCCCCC
Confidence 567788 8999999999999999999999888772 36788889999999999999 99999988 678899999999
Q ss_pred CCchhHHHHHhhhhc
Q 042220 84 GNTPLHVLAAVLQKE 98 (255)
Q Consensus 84 G~TpLh~A~~~~~~~ 98 (255)
|+||||+|++.++.+
T Consensus 78 g~tpL~~A~~~~~~~ 92 (282)
T 1oy3_D 78 GHTALHLACRVRAHT 92 (282)
T ss_dssp SCCHHHHHTTTTCHH
T ss_pred CCCHHHHHHHcCCcc
Confidence 999999998875543
No 39
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.66 E-value=1.1e-16 Score=125.64 Aligned_cols=82 Identities=12% Similarity=0.051 Sum_probs=77.2
Q ss_pred CCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHH
Q 042220 13 QKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLA 92 (255)
Q Consensus 13 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~ 92 (255)
+|.||||.|+..|+.++++.|++.++++ +.+|.+|+||||+|+..|+ .+++++|+ +.|.+++.+|..|+||||+|+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~ 77 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVI-NHTDEEGFTPLMWAAAHGQ--IAVVEFLL-QNGADPQLLGKGRESALSLAC 77 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTC--HHHHHHHH-HTTCCTTCCCTTCCCHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHCCC--HHHHHHHH-HcCCCCCCcCCCCCcHHHHHH
Confidence 6899999999999999999999999887 8899999999999999999 99999999 679999999999999999999
Q ss_pred Hhhhhc
Q 042220 93 AVLQKE 98 (255)
Q Consensus 93 ~~~~~~ 98 (255)
..++.+
T Consensus 78 ~~~~~~ 83 (167)
T 3v31_A 78 SKGYTD 83 (167)
T ss_dssp HHTCHH
T ss_pred HcCCHH
Confidence 987654
No 40
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.66 E-value=2.1e-16 Score=117.50 Aligned_cols=87 Identities=30% Similarity=0.360 Sum_probs=80.9
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
++.+|+ .|.||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+..++ .+++++|+ +.|.+++.+|.+|+
T Consensus 28 ~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~--~~~~~~Ll-~~g~~~~~~~~~g~ 102 (126)
T 1n0r_A 28 VNAKDK-NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGH--LEVVKLLL-EAGADVNAKDKNGR 102 (126)
T ss_dssp TTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC--HHHHHHHH-HTTCCTTCCCTTSC
T ss_pred CCCcCC-CCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCcHHHHHHHcCh--HHHHHHHH-HcCCCCcccCCCCC
Confidence 456788 9999999999999999999999999998 8899999999999999999 99999999 78999999999999
Q ss_pred chhHHHHHhhhh
Q 042220 86 TPLHVLAAVLQK 97 (255)
Q Consensus 86 TpLh~A~~~~~~ 97 (255)
||||+|++.++.
T Consensus 103 t~l~~A~~~~~~ 114 (126)
T 1n0r_A 103 TPLHLAARNGHL 114 (126)
T ss_dssp CHHHHHHHTTCH
T ss_pred CHHHHHHHcCcH
Confidence 999999998543
No 41
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.66 E-value=4.7e-16 Score=131.33 Aligned_cols=86 Identities=16% Similarity=0.076 Sum_probs=79.1
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCccccccc-CCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDE-RGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNG 84 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~-~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G 84 (255)
++.+|. +|+||||+|++.|+.+++++|+++++++ +.+|. .|+||||+|+..|+ .+++++|+ +.|++++.+|.+|
T Consensus 151 ~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~~A~~~~~--~~~v~~Ll-~~gad~~~~d~~g 225 (282)
T 1oy3_D 151 LEAENY-DGHTPLHVAVIHKDAEMVRLLRDAGADL-NKPEPTCGRTPLHLAVEAQA--ASVLELLL-KAGADPTARMYGG 225 (282)
T ss_dssp TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHHHTTC--HHHHHHHH-HTTCCTTCCCTTS
T ss_pred CCCcCC-CCcCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCcCHHHHHHHcCC--HHHHHHHH-HcCCCCcccccCC
Confidence 567788 9999999999999999999999999998 66664 59999999999999 99999999 7899999999999
Q ss_pred CchhHHHHHhhh
Q 042220 85 NTPLHVLAAVLQ 96 (255)
Q Consensus 85 ~TpLh~A~~~~~ 96 (255)
+||||+|++.++
T Consensus 226 ~tpL~~A~~~~~ 237 (282)
T 1oy3_D 226 RTPLGSALLRPN 237 (282)
T ss_dssp CCHHHHHHTSSC
T ss_pred CCHHHHHHHcCC
Confidence 999999998843
No 42
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.66 E-value=2.3e-16 Score=129.17 Aligned_cols=91 Identities=23% Similarity=0.221 Sum_probs=79.7
Q ss_pred CcceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCC
Q 042220 4 SAACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVN 83 (255)
Q Consensus 4 ~~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~ 83 (255)
+..+..|+ +|+||||+|++.|+.+++++|+++++++ +.+|.+|+||||+|+..|+ .+++++|++....+++.+|.+
T Consensus 16 ~~~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~--~~~v~~Ll~~~~~~~~~~~~~ 91 (223)
T 2f8y_A 16 SLHNQTDR-TGETALHLAARYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVSADA--QGVFQILIRNRATDLDARMHD 91 (223)
T ss_dssp CTTCCCTT-TCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC--HHHHHHHHHBTTSCTTCCCTT
T ss_pred CcccccCC-CCCchHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCC--HHHHHHHHHcCCCCcccCCCC
Confidence 33445578 8999999999999999999999999988 7889999999999999999 999999994444489999999
Q ss_pred CCchhHHHHHhhhhc
Q 042220 84 GNTPLHVLAAVLQKE 98 (255)
Q Consensus 84 G~TpLh~A~~~~~~~ 98 (255)
|.||||+|++.++.+
T Consensus 92 g~t~L~~A~~~~~~~ 106 (223)
T 2f8y_A 92 GTTPLILAARLAVEG 106 (223)
T ss_dssp CCCHHHHHHHHTCHH
T ss_pred CCcHHHHHHHhCcHH
Confidence 999999999986654
No 43
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.65 E-value=2.5e-16 Score=131.92 Aligned_cols=88 Identities=24% Similarity=0.243 Sum_probs=78.0
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccc-cCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCC
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVD-ERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVN 83 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d-~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~ 83 (255)
.++.+|+ +|+||||+|+..|+.++++.|+++++++ +.+| ..|+||||+|+..|+ .+++++|+ +.|++++.+|.+
T Consensus 69 ~~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~t~L~~A~~~g~--~~~v~~Ll-~~ga~~~~~d~~ 143 (244)
T 3ui2_A 69 DVDAVDE-NGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMAAGYVR--PEVVEALV-ELGADIEVEDER 143 (244)
T ss_dssp CTTCBCT-TSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHHHHHTTC--HHHHHHHH-HTTCCTTCCCTT
T ss_pred CCCCcCC-CCCCHHHHHHHCCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHHHcCC--HHHHHHHH-HCCCCCCCCCCC
Confidence 4577888 9999999999999999999999999998 6666 789999999999999 99999998 679999999999
Q ss_pred CCchhHHHHHhhhh
Q 042220 84 GNTPLHVLAAVLQK 97 (255)
Q Consensus 84 G~TpLh~A~~~~~~ 97 (255)
|+||||+|++.++.
T Consensus 144 g~t~l~~A~~~~~~ 157 (244)
T 3ui2_A 144 GLTALELAREILKT 157 (244)
T ss_dssp CCCHHHHHHHHHTT
T ss_pred CCcHHHHHHHHHhc
Confidence 99999999987443
No 44
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.65 E-value=2.9e-16 Score=123.73 Aligned_cols=87 Identities=24% Similarity=0.223 Sum_probs=81.3
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
++.+|+ +|+||||+|+..|+.+++++|+++++++ +.+|.+|+||||+|+..++ .+++++|+ +.|++++.+|.+|+
T Consensus 73 ~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~g~~~~~~~~~g~ 147 (169)
T 2y1l_E 73 VNAVDH-AGMTPLRLAALFGHLEIVEVLLKNGADV-NANDMEGHTPLHLAAMFGH--LEIVEVLL-KNGADVNAQDKFGK 147 (169)
T ss_dssp TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC--HHHHHHHH-HTTCCTTCCCTTSC
T ss_pred CCccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCCCCcCCCCC
Confidence 566788 9999999999999999999999999998 8899999999999999999 99999999 78999999999999
Q ss_pred chhHHHHHhhhh
Q 042220 86 TPLHVLAAVLQK 97 (255)
Q Consensus 86 TpLh~A~~~~~~ 97 (255)
||||+|++.++.
T Consensus 148 t~l~~A~~~~~~ 159 (169)
T 2y1l_E 148 TAFDISIDNGNE 159 (169)
T ss_dssp CHHHHHHHTTCH
T ss_pred CHHHHHHHhCCH
Confidence 999999998553
No 45
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.65 E-value=1.4e-16 Score=133.65 Aligned_cols=140 Identities=16% Similarity=-0.007 Sum_probs=103.0
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
++.+|. +|+||||+|+..|+.+++++|+++++...+.+|.+|+||||+|+..++ .+++++|+ +.|.+++.+|.+|+
T Consensus 83 ~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~g~~~~~~d~~g~ 158 (253)
T 1yyh_A 83 ANIQDN-MGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAV--EGMLEDLI-NSHADVNAVDDLGK 158 (253)
T ss_dssp TTCCCT-TSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTC--SSHHHHHH-HTTCCTTCBCTTSC
T ss_pred CCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCh--HHHHHHHH-HcCCCCCCcCCCCC
Confidence 466788 899999999999999999999999884448889999999999999999 99999999 78999999999999
Q ss_pred chhHHHHHhhhhc------cchhhhHHHHhhccchHHHHHHHHHHHHHhccCCCCCccCCCCCCCccccc
Q 042220 86 TPLHVLAAVLQKE------KTAVEEGEIKELKPRHTIVATLIATVTFAAGFTLPGGYWGKEGPIPGTSIL 149 (255)
Q Consensus 86 TpLh~A~~~~~~~------~~~~~~~~~~~~~~~~~vvA~Liatvtf~a~l~~PGg~~~~~~~~~g~~~~ 149 (255)
||||+|++.++.+ +...+.....+.+++.+..|+.-........|..-|...+..+..+.+|+.
T Consensus 159 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 228 (253)
T 1yyh_A 159 SALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRD 228 (253)
T ss_dssp BHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHH
Confidence 9999999987654 111111112233455666555544444444444456665555555556654
No 46
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.65 E-value=1.6e-16 Score=130.71 Aligned_cols=89 Identities=18% Similarity=0.186 Sum_probs=82.1
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCC
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNG 84 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G 84 (255)
.++.+|+ .|+||||+|+..|+.+++++|+++++++ +.+|.+|+||||+|+..++ .+++++|+ +.|.+++.+|..|
T Consensus 65 ~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~--~~~~~~Ll-~~g~~~~~~~~~g 139 (231)
T 3aji_A 65 PVNDKDD-AGWSPLHIAASAGXDEIVKALLVKGAHV-NAVNQNGCTPLHYAASKNR--HEIAVMLL-EGGANPDAKDHYD 139 (231)
T ss_dssp CSCCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC--HHHHHHHH-HTTCCTTCCCTTS
T ss_pred CCCCcCC-CCCCHHHHHHHcCHHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCCCCcCCCC
Confidence 3567788 9999999999999999999999999998 7889999999999999999 99999999 7899999999999
Q ss_pred CchhHHHHHhhhhc
Q 042220 85 NTPLHVLAAVLQKE 98 (255)
Q Consensus 85 ~TpLh~A~~~~~~~ 98 (255)
+||||+|++.++.+
T Consensus 140 ~t~L~~A~~~~~~~ 153 (231)
T 3aji_A 140 ATAMHRAAAKGNLK 153 (231)
T ss_dssp CCHHHHHHHHTCHH
T ss_pred CcHHHHHHHcCCHH
Confidence 99999999986654
No 47
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.65 E-value=1.9e-16 Score=123.97 Aligned_cols=84 Identities=21% Similarity=0.209 Sum_probs=79.0
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCC
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNG 84 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G 84 (255)
.++.+|+ +|+||||+|+..|+.+++++|+++++++ +.+|.+|+||||+|+..|+ .+++++|+ +.|++++.+|.+|
T Consensus 67 ~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~ga~~~~~~~~g 141 (165)
T 3twr_A 67 DVHAKDK-GGLVPLHNACSYGHYEVAELLVKHGAVV-NVADLWKFTPLHEAAAKGK--YEICKLLL-QHGADPTKKNRDG 141 (165)
T ss_dssp CTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTC--HHHHHHHH-HTTCCTTCCCTTS
T ss_pred CCCccCC-CCCCHHHHHHHcCcHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCCcccCCCC
Confidence 3567788 9999999999999999999999999998 8899999999999999999 99999999 7899999999999
Q ss_pred CchhHHHHH
Q 042220 85 NTPLHVLAA 93 (255)
Q Consensus 85 ~TpLh~A~~ 93 (255)
+||||+|.+
T Consensus 142 ~t~l~~a~~ 150 (165)
T 3twr_A 142 NTPLDLVKD 150 (165)
T ss_dssp CCTGGGSCT
T ss_pred CChhHhHhc
Confidence 999999876
No 48
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.65 E-value=1.8e-16 Score=131.29 Aligned_cols=140 Identities=14% Similarity=0.031 Sum_probs=102.5
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhh------hh
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEML------IN 78 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~------i~ 78 (255)
.++.+|+ +|+||||+|+..|+.+++++|+++++++ +.+|.+|+||||+|+..|+ .+++++|+ +.+.+ ++
T Consensus 37 ~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~~~~~~~~~~~~ 111 (236)
T 1ikn_D 37 FLNFQNN-LQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGNTPLHLACEQGC--LASVGVLT-QSCTTPHLHSILK 111 (236)
T ss_dssp CCCCCCT-TCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCCCHHHHHHHHTC--HHHHHHHH-HSTTTTSSSCGGG
T ss_pred HhhccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCC--HHHHHHHH-hcccchhHHHHhh
Confidence 5678888 9999999999999999999999999888 7889999999999999999 99999998 45443 67
Q ss_pred ccCCCCCchhHHHHHhhhhc------cchhhhHHHHh-hccchHHHHHHHHHHHHHhccCCCCCccCCCCCCCccccc
Q 042220 79 KQDVNGNTPLHVLAAVLQKE------KTAVEEGEIKE-LKPRHTIVATLIATVTFAAGFTLPGGYWGKEGPIPGTSIL 149 (255)
Q Consensus 79 ~~d~~G~TpLh~A~~~~~~~------~~~~~~~~~~~-~~~~~~vvA~Liatvtf~a~l~~PGg~~~~~~~~~g~~~~ 149 (255)
.+|.+|.||||+|+..++.+ +.........+ .+++.++.|+.-........|-.-|...+..+..+.+|+.
T Consensus 112 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~ 189 (236)
T 1ikn_D 112 ATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQ 189 (236)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGG
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHH
Confidence 88999999999999987654 11000011111 4556666666554444444454556665555555566765
No 49
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.64 E-value=1.7e-16 Score=123.65 Aligned_cols=81 Identities=16% Similarity=0.073 Sum_probs=62.7
Q ss_pred CCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHH
Q 042220 13 QKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLA 92 (255)
Q Consensus 13 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~ 92 (255)
...||||.|++.|+.++++.|+++++++ +.+|.+|+||||+|+. |+ .+++++|+ +.|.+++.+|.+|+||||+|+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~-~~--~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~ 78 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNV-NAQNGFGRTALQVMKL-GN--PEIARRLL-LRGANPDLKDRTGFAVIHDAA 78 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCT-TCCCTTSCCHHHHCCS-SC--HHHHHHHH-HTTCCTTCCCTTSCCHHHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCc-cccCccCccHHHHHHc-Cc--HHHHHHHH-HcCCCCCCCCCCCCCHHHHHH
Confidence 4567888888888888888888877776 6777788888888877 77 78888877 567788888888888888888
Q ss_pred Hhhhhc
Q 042220 93 AVLQKE 98 (255)
Q Consensus 93 ~~~~~~ 98 (255)
+.++.+
T Consensus 79 ~~~~~~ 84 (162)
T 1ihb_A 79 RAGFLD 84 (162)
T ss_dssp HHTCHH
T ss_pred HcCCHH
Confidence 776554
No 50
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.64 E-value=1.6e-16 Score=130.33 Aligned_cols=86 Identities=17% Similarity=0.130 Sum_probs=45.0
Q ss_pred eeecCCCCCcHHHHHHHcChHHHHHHHHHhC--CCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhh--hhhhccCC
Q 042220 7 CISDNDQKMTALLLAAGRGHIRVVNEIISTC--PDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVE--MLINKQDV 82 (255)
Q Consensus 7 ~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~--~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~--~~i~~~d~ 82 (255)
+.+|. +|+||||+|+..|+.+++++|++++ ++....+|..|+||||+|+..|+ .+++++|+ +.+ .+++.+|.
T Consensus 30 ~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~--~~~~~~Ll-~~g~~~~~~~~~~ 105 (228)
T 2dzn_A 30 LQKDQ-DGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGN--LEVVKSLY-DRPLKPDLNKITN 105 (228)
T ss_dssp TCCCT-TSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCC--HHHHHHHH-SSSSCCCTTCCCT
T ss_pred ccCCC-CCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCC--HHHHHHHH-hCCCCcccccCCc
Confidence 33455 5555555555555555555555555 33311144555555555555555 55555555 333 45555555
Q ss_pred CCCchhHHHHHhhh
Q 042220 83 NGNTPLHVLAAVLQ 96 (255)
Q Consensus 83 ~G~TpLh~A~~~~~ 96 (255)
+|.||||+|++.++
T Consensus 106 ~g~t~L~~A~~~~~ 119 (228)
T 2dzn_A 106 QGVTCLHLAVGKKW 119 (228)
T ss_dssp TCCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCC
Confidence 55555555555433
No 51
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.64 E-value=2.8e-16 Score=124.88 Aligned_cols=87 Identities=23% Similarity=0.256 Sum_probs=81.2
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCC
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNG 84 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G 84 (255)
.++.+|+ +|+||||+|+..|+.+++++|+++++++ +.+|.+|+||||+|+..++ .+++++|+ +.|++++.+|.+|
T Consensus 64 ~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~--~~~v~~Ll-~~ga~~~~~~~~g 138 (179)
T 3f6q_A 64 RINVMNR-GDDTPLHLAASHGHRDIVQKLLQYKADI-NAVNEHGNVPLHYACFWGQ--DQVAEDLV-ANGALVSICNKYG 138 (179)
T ss_dssp CTTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC--HHHHHHHH-HTTCCSSBCCTTS
T ss_pred CCCCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCC--HHHHHHHH-HCCCCcchhccCC
Confidence 3567788 9999999999999999999999999998 8899999999999999999 99999999 7899999999999
Q ss_pred CchhHHHHHhhh
Q 042220 85 NTPLHVLAAVLQ 96 (255)
Q Consensus 85 ~TpLh~A~~~~~ 96 (255)
+||||+|++.++
T Consensus 139 ~tpl~~A~~~~~ 150 (179)
T 3f6q_A 139 EMPVDKAKAPLR 150 (179)
T ss_dssp CCGGGGSCHHHH
T ss_pred CCcHHHHHHHHH
Confidence 999999988744
No 52
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.64 E-value=9.4e-17 Score=125.04 Aligned_cols=88 Identities=10% Similarity=0.089 Sum_probs=81.1
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCch-HHHHHHHhCCchHHHHHHHhhhhhhhhhccCCC
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWN-LLHFAMASSNLFQLHSRLRNRSVEMLINKQDVN 83 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t-~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~ 83 (255)
.++.+|. +|+||||+|+ .|+.+++++|+++++++ +.+|..|+| |||+|+..|+ .+++++|+ +.|++++.+|.+
T Consensus 37 ~~~~~~~-~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~~g~ttpL~~A~~~~~--~~~v~~Ll-~~ga~~~~~d~~ 110 (156)
T 1bi7_B 37 NPNAPNS-YGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRPVHDAAREGF--LDTLVVLH-RAGARLDVRDAW 110 (156)
T ss_dssp CTTCCCS-SSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCHHHHHHHHTC--HHHHHHHH-HHTCCSSCCCTT
T ss_pred CCCCCCC-CCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHHCCC--HHHHHHHH-HcCCCCcccCCC
Confidence 3567788 9999999985 99999999999999998 889999999 9999999999 99999999 789999999999
Q ss_pred CCchhHHHHHhhhhc
Q 042220 84 GNTPLHVLAAVLQKE 98 (255)
Q Consensus 84 G~TpLh~A~~~~~~~ 98 (255)
|+||||+|++.++.+
T Consensus 111 g~tpl~~A~~~~~~~ 125 (156)
T 1bi7_B 111 GRLPVDLAEELGHRD 125 (156)
T ss_dssp CCCHHHHHHHHTCHH
T ss_pred CCCHHHHHHHhCHHH
Confidence 999999999986654
No 53
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.64 E-value=1.5e-16 Score=134.17 Aligned_cols=82 Identities=16% Similarity=0.066 Sum_probs=70.5
Q ss_pred CCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHH
Q 042220 13 QKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLA 92 (255)
Q Consensus 13 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~ 92 (255)
+|+||||+|++.|+.++++.|+++++++ +.+|.+|+||||+|+..|+ .+++++|+ +.|++++.+|.+|+||||+|+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~--~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~ 77 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAV-NIITADHVSPLHEACLGGH--LSCVKILL-KHGAQVNGVTADWHTPLFNAC 77 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTC--HHHHHHHH-HTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCC--HHHHHHHH-HCCCCCCCCCCCCCCHHHHHH
Confidence 5889999999999999999999988887 7888899999999999999 99999888 678889999999999999999
Q ss_pred Hhhhhc
Q 042220 93 AVLQKE 98 (255)
Q Consensus 93 ~~~~~~ 98 (255)
..++.+
T Consensus 78 ~~~~~~ 83 (261)
T 2xai_A 78 VSGSWD 83 (261)
T ss_dssp HHTCHH
T ss_pred HcCCHH
Confidence 886654
No 54
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.64 E-value=3.3e-16 Score=128.16 Aligned_cols=139 Identities=17% Similarity=0.003 Sum_probs=98.3
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
++.+|. +|+||||+|+..|+.+++++|+++++...+.+|..|+||||+|+..++ .+++++|+ +.+.+++.+|.+|+
T Consensus 51 ~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~--~~~~~~Ll-~~g~~~~~~~~~g~ 126 (223)
T 2f8y_A 51 ANIQDN-MGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAV--EGMLEDLI-NSHADVNAVDDLGK 126 (223)
T ss_dssp TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTC--HHHHHHHH-HTTCCTTCBCTTSC
T ss_pred CCCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCc--HHHHHHHH-HcCCCCcCcCCCCC
Confidence 456788 899999999999999999999999884447889999999999999999 99999998 68899999999999
Q ss_pred chhHHHHHhhhhc------cchhhhHHHHhhccchHHHHHHHHHHHHHhccCCCCCccCCCCCCCcccc
Q 042220 86 TPLHVLAAVLQKE------KTAVEEGEIKELKPRHTIVATLIATVTFAAGFTLPGGYWGKEGPIPGTSI 148 (255)
Q Consensus 86 TpLh~A~~~~~~~------~~~~~~~~~~~~~~~~~vvA~Liatvtf~a~l~~PGg~~~~~~~~~g~~~ 148 (255)
||||+|+..++.+ +...+.......+++.+..|+.-........+-.-|...+..+..+.+|+
T Consensus 127 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l 195 (223)
T 2f8y_A 127 SALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPR 195 (223)
T ss_dssp BHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHH
Confidence 9999999986654 11111111122345555555544433333333334554443333334443
No 55
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.64 E-value=1.9e-16 Score=130.49 Aligned_cols=92 Identities=20% Similarity=0.163 Sum_probs=72.3
Q ss_pred CCcceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcc----cccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhh
Q 042220 3 KSAACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCC----KQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLIN 78 (255)
Q Consensus 3 ~~~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~----~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~ 78 (255)
+..++.+|+ +|+||||+|+..|+.+++++|++.+++.. +.+|.+|+||||+|+..|+ .+++++|+ +.|.+++
T Consensus 27 g~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~g~~~~ 102 (232)
T 2rfa_A 27 GCEVHQRGA-MGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQN--VNLVRALL-ARGASVS 102 (232)
T ss_dssp CSCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTC--HHHHHHHH-HTTCCTT
T ss_pred CCCcccCCC-CCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCC--HHHHHHHH-hCCCCCC
Confidence 344667788 88888888888888888888888887652 3456788888888888888 88888888 6678887
Q ss_pred ccCC-------------CCCchhHHHHHhhhhc
Q 042220 79 KQDV-------------NGNTPLHVLAAVLQKE 98 (255)
Q Consensus 79 ~~d~-------------~G~TpLh~A~~~~~~~ 98 (255)
.+|. +|+||||+|++.++.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 135 (232)
T 2rfa_A 103 ARATGSVFHYRPHNLIYYGEHPLSFAACVGSEE 135 (232)
T ss_dssp CCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHH
T ss_pred cccCCcceeecccccccCCCCHHHHHHHcCCHH
Confidence 7765 6888888888876654
No 56
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.64 E-value=3.2e-16 Score=129.46 Aligned_cols=88 Identities=18% Similarity=0.168 Sum_probs=75.4
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHH----hCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIIS----TCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQD 81 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~----~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d 81 (255)
++.+|+ +|+||||+|++.|+.+++++|++ .+.++ +.+|..|+||||+|+..|+ .+++++|+ +.|.+++.+|
T Consensus 2 ~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~g~~~~~~~ 76 (241)
T 1k1a_A 2 ATRADE-DGDTPLHIAVVQGNLPAVHRLVNLFQQGGREL-DIYNNLRQTPLHLAVITTL--PSVVRLLV-TAGASPMALD 76 (241)
T ss_dssp -----C-TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTC--HHHHHHHH-HTTCCTTCCC
T ss_pred ccccCC-CCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCC-CcccccCCCHHHHHHHcCC--HHHHHHHH-HcCCCccccC
Confidence 567889 99999999999999999999987 45566 7889999999999999999 99999999 7899999999
Q ss_pred CCCCchhHHHHHhhhhc
Q 042220 82 VNGNTPLHVLAAVLQKE 98 (255)
Q Consensus 82 ~~G~TpLh~A~~~~~~~ 98 (255)
.+|+||||+|++.++.+
T Consensus 77 ~~g~t~l~~A~~~~~~~ 93 (241)
T 1k1a_A 77 RHGQTAAHLACEHRSPT 93 (241)
T ss_dssp TTSCCHHHHHHHTTCHH
T ss_pred CCCCCHHHHHHHcCCHH
Confidence 99999999999986654
No 57
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.63 E-value=2.5e-16 Score=129.50 Aligned_cols=89 Identities=19% Similarity=0.172 Sum_probs=72.5
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
++.+|+ +|+||||+|+..|+.++++.|++.++++ +.+|..|+||||+|+..|+ .+++++|++..|++++.+|.+|+
T Consensus 66 v~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~--~~~v~~Ll~~~g~~~~~~d~~g~ 141 (222)
T 3ehr_A 66 VAEQAE-SIDNPLHEAAKRGNLSWLRECLDNRVGV-NGLDKAGSTALYWACHGGH--KDIVEMLFTQPNIELNQQNKLGD 141 (222)
T ss_dssp HHHHEE-EESCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC--HHHHHHHTTSTTCCCCCCCTTSC
T ss_pred cccccc-ccccccccccccCcHHHHHHHHhCCCCc-cccCCCCCCHHHHHHHcCC--HHHHHHHHcCCCCCccccCCCCC
Confidence 445566 7888888888888888888888888887 7788888888888888888 88888888433888888888888
Q ss_pred chhHHHHHhhhhc
Q 042220 86 TPLHVLAAVLQKE 98 (255)
Q Consensus 86 TpLh~A~~~~~~~ 98 (255)
||||+|++.++.+
T Consensus 142 tpL~~A~~~~~~~ 154 (222)
T 3ehr_A 142 TALHAAAWKGYAD 154 (222)
T ss_dssp CHHHHHHHHTCHH
T ss_pred CHHHHHHHcCCHH
Confidence 8888888886654
No 58
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.63 E-value=1e-15 Score=130.80 Aligned_cols=87 Identities=20% Similarity=0.235 Sum_probs=70.4
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
++.+|. +|+||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+..|+ .+++++|+ +.|.+++.+|.+|.
T Consensus 66 ~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~g~--~~~v~~Ll-~~g~~~~~~~~~g~ 140 (299)
T 1s70_B 66 INYANV-DGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPLHAAASCGY--LDIAEYLI-SQGAHVGAVNSEGD 140 (299)
T ss_dssp TTCBCT-TCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTC--HHHHHHHH-HTTCCTTCCCTTSC
T ss_pred CcccCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCC--HHHHHHHH-hCCCCCCCcCCCCC
Confidence 456677 7888888888888888888888888877 7778888888888888888 88888887 67888888888888
Q ss_pred chhHHHHHhhhh
Q 042220 86 TPLHVLAAVLQK 97 (255)
Q Consensus 86 TpLh~A~~~~~~ 97 (255)
||||+|+..++.
T Consensus 141 t~l~~A~~~~~~ 152 (299)
T 1s70_B 141 TPLDIAEEEAME 152 (299)
T ss_dssp CHHHHCCSHHHH
T ss_pred CHHHHHHhcchH
Confidence 888888776544
No 59
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.63 E-value=1.2e-16 Score=127.78 Aligned_cols=82 Identities=22% Similarity=0.272 Sum_probs=75.9
Q ss_pred cCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccC-CCCCchh
Q 042220 10 DNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQD-VNGNTPL 88 (255)
Q Consensus 10 d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d-~~G~TpL 88 (255)
|+ +|+||||+|++.|+.++++.|++ +.++ +.+|.+|+||||+|+..|+ .+++++|+ +.|+++|.+| .+|+|||
T Consensus 41 ~~-~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~~~--~~~v~~Ll-~~ga~~~~~~~~~g~tpL 114 (183)
T 3deo_A 41 VS-EYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGS--DKCVRLLA-EAGADLDHRDMRGGLTAL 114 (183)
T ss_dssp HH-HHHHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCTTSCCHHHHHHHHTC--HHHHHHHH-HTTCCTTCCCSSSSCCHH
T ss_pred CC-CCCCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCCCcCCCCCCCCHH
Confidence 55 78999999999999999999999 7777 8899999999999999999 99999999 7899999998 8899999
Q ss_pred HHHHHhhhh
Q 042220 89 HVLAAVLQK 97 (255)
Q Consensus 89 h~A~~~~~~ 97 (255)
|+|+..++.
T Consensus 115 ~~A~~~~~~ 123 (183)
T 3deo_A 115 HMAAGYVRP 123 (183)
T ss_dssp HHHHHTTCH
T ss_pred HHHHhcCcH
Confidence 999998554
No 60
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.63 E-value=3.8e-16 Score=128.99 Aligned_cols=88 Identities=19% Similarity=0.215 Sum_probs=79.9
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
.+.+|+ +|+||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+..|+ .+++++|+ +.|.+++.+|.+|.
T Consensus 4 ~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~g~~~~~~~~~g~ 78 (237)
T 3b7b_A 4 FKMEHQ-NKRSPLHAAAEAGHVDICHMLVQAGANI-DTCSEDQRTPLMEAAENNH--LEAVKYLI-KAGALVDPKDAEGS 78 (237)
T ss_dssp CCCSSC-CSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTC--HHHHHHHH-TTTCCCCCCCTTSC
T ss_pred cccccC-CCCCHHHHHHHcCcHHHHHHHHHcCCCc-CccCCCCCCHHHHHHHhCC--HHHHHHHH-hCCCCCCCCCCCCC
Confidence 356788 8999999999999999999999999988 7889999999999999999 99999998 78999999999999
Q ss_pred chhHHHHHhhhhc
Q 042220 86 TPLHVLAAVLQKE 98 (255)
Q Consensus 86 TpLh~A~~~~~~~ 98 (255)
||||+|+..++.+
T Consensus 79 t~L~~A~~~~~~~ 91 (237)
T 3b7b_A 79 TCLHLAAKKGHYE 91 (237)
T ss_dssp CHHHHHHHTTCHH
T ss_pred cHHHHHHHcCCHH
Confidence 9999999986654
No 61
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.63 E-value=3.8e-16 Score=129.81 Aligned_cols=92 Identities=26% Similarity=0.260 Sum_probs=75.4
Q ss_pred CCCcceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccC
Q 042220 2 DKSAACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQD 81 (255)
Q Consensus 2 d~~~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d 81 (255)
|+...+..+. +|.||||+|+..|+.++++.|++.++++ +.+|.+|+||||+|+..|+ .+++++|+ +.|+++|.+|
T Consensus 10 ~~~~~~~~~~-~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~tpLh~A~~~g~--~~~v~~Ll-~~ga~~n~~d 84 (229)
T 2vge_A 10 SPRKARRARL-NPLVLLLDAALTGELEVVQQAVKEMNDP-SQPNEEGITALHNAICGAN--YSIVDFLI-TAGANVNSPD 84 (229)
T ss_dssp CCCCCCCTTS-CHHHHHHHHHHHTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTC--HHHHHHHH-HTTCCTTCCC
T ss_pred CCcccccccc-chhHHHHHHHHcCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCC--HHHHHHHH-HCCCCCCCCC
Confidence 3444455555 7788889999999999999999888887 7788889999999999998 88888888 6788888888
Q ss_pred CCCCchhHHHHHhhhhc
Q 042220 82 VNGNTPLHVLAAVLQKE 98 (255)
Q Consensus 82 ~~G~TpLh~A~~~~~~~ 98 (255)
.+|+||||+|+..++.+
T Consensus 85 ~~g~tpLh~A~~~g~~~ 101 (229)
T 2vge_A 85 SHGWTPLHCAASCNDTV 101 (229)
T ss_dssp TTCCCHHHHHHHTTCHH
T ss_pred CCCCCHHHHHHHcCCHH
Confidence 88999999998876543
No 62
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.63 E-value=5.6e-16 Score=127.34 Aligned_cols=85 Identities=16% Similarity=0.112 Sum_probs=79.8
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHh-CCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCC
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIIST-CPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVN 83 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~-~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~ 83 (255)
.++.+|. +|+||||+|+..|+.++++.|++. +.++ +.+|.+|+||||+|+..|+ .+++++|+ +.|++++.+|.+
T Consensus 98 ~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~d~~g~tpL~~A~~~~~--~~~v~~Ll-~~ga~~~~~~~~ 172 (222)
T 3ehr_A 98 GVNGLDK-AGSTALYWACHGGHKDIVEMLFTQPNIEL-NQQNKLGDTALHAAAWKGY--ADIVQLLL-AKGARTDLRNIE 172 (222)
T ss_dssp CTTCCCT-TSCCHHHHHHHTTCHHHHHHHTTSTTCCC-CCCCTTSCCHHHHHHHHTC--HHHHHHHH-HHTCCSCCCCTT
T ss_pred CccccCC-CCCCHHHHHHHcCCHHHHHHHHcCCCCCc-cccCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCCccccCC
Confidence 3567888 999999999999999999999998 7777 8899999999999999999 99999999 789999999999
Q ss_pred CCchhHHHHHh
Q 042220 84 GNTPLHVLAAV 94 (255)
Q Consensus 84 G~TpLh~A~~~ 94 (255)
|+||||+|+..
T Consensus 173 g~t~l~~A~~~ 183 (222)
T 3ehr_A 173 KKLAFDMATNA 183 (222)
T ss_dssp SCCHHHHCCSH
T ss_pred CCCHHHHhcch
Confidence 99999999987
No 63
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.63 E-value=5.8e-16 Score=127.01 Aligned_cols=136 Identities=16% Similarity=0.085 Sum_probs=93.3
Q ss_pred ecCCCCCcHHHHHHHcChHHHHHHHHHhC--CCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCc
Q 042220 9 SDNDQKMTALLLAAGRGHIRVVNEIISTC--PDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNT 86 (255)
Q Consensus 9 ~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~--~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~T 86 (255)
+|. .|+||||+|+..|+.+++++|++++ ++. +.+|.+|+||||+|+..++ .+++++|+ +.|.+++.+|.+|+|
T Consensus 68 ~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~~g~t~L~~A~~~~~--~~~~~~Ll-~~g~~~~~~~~~g~t 142 (228)
T 2dzn_A 68 PDD-SGWTPFHIACSVGNLEVVKSLYDRPLKPDL-NKITNQGVTCLHLAVGKKW--FEVSQFLI-ENGASVRIKDKFNQI 142 (228)
T ss_dssp CCT-TSCCHHHHHHHHCCHHHHHHHHSSSSCCCT-TCCCTTCCCHHHHHHHTTC--HHHHHHHH-HTTCCSCCCCTTSCC
T ss_pred CCC-CCCCHHHHHHHcCCHHHHHHHHhCCCCccc-ccCCcCCCCHHHHHHHcCC--HhHHHHHH-HcCCCccccCCCCCC
Confidence 666 7888888888888888888888877 665 6777888888888888888 88888887 668888888888888
Q ss_pred hhHHHHHhhhhc------cch-hhhHHHHhhccchHHHHHHHHHHHHHhccC-CCCCccCCCCCCCccccc
Q 042220 87 PLHVLAAVLQKE------KTA-VEEGEIKELKPRHTIVATLIATVTFAAGFT-LPGGYWGKEGPIPGTSIL 149 (255)
Q Consensus 87 pLh~A~~~~~~~------~~~-~~~~~~~~~~~~~~vvA~Liatvtf~a~l~-~PGg~~~~~~~~~g~~~~ 149 (255)
|||+|++.++.+ +.. .........+++.+..|+.-........+- ..|...+..+.++.+|+.
T Consensus 143 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~ 213 (228)
T 2dzn_A 143 PLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAED 213 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGG
T ss_pred HHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHH
Confidence 888888876554 111 111222344566777776665555555554 555555444445556655
No 64
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.62 E-value=6.7e-16 Score=127.54 Aligned_cols=90 Identities=21% Similarity=0.169 Sum_probs=79.4
Q ss_pred CcceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhh----hhhc
Q 042220 4 SAACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEM----LINK 79 (255)
Q Consensus 4 ~~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~----~i~~ 79 (255)
..++.+|+ +|+||||+|+..|+.+++++|+++++++ +.+|.+|+||||+|+..++ .+++++|+ +.+. +++.
T Consensus 37 ~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~--~~~~~~Ll-~~~~~~~~~~~~ 111 (241)
T 1k1a_A 37 RELDIYNN-LRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHGQTAAHLACEHRS--PTCLRALL-DSAAPGTLDLEA 111 (241)
T ss_dssp CCSCCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC--HHHHHHHH-HHSCTTSCCTTC
T ss_pred CCCCcccc-cCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCccccccc
Confidence 45677888 8999999999999999999999999888 7889999999999999999 99999998 5554 8889
Q ss_pred cCCCCCchhHHHHHhhhhc
Q 042220 80 QDVNGNTPLHVLAAVLQKE 98 (255)
Q Consensus 80 ~d~~G~TpLh~A~~~~~~~ 98 (255)
+|.+|+||||+|++.++.+
T Consensus 112 ~~~~g~t~L~~A~~~~~~~ 130 (241)
T 1k1a_A 112 RNYDGLTALHVAVNTECQE 130 (241)
T ss_dssp CCTTSCCHHHHHHHHTCHH
T ss_pred cCcCCCcHHHHHHHcCCHH
Confidence 9999999999999886654
No 65
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.62 E-value=9.6e-16 Score=126.57 Aligned_cols=86 Identities=23% Similarity=0.186 Sum_probs=51.9
Q ss_pred eeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhh-hhhhccCCCCC
Q 042220 7 CISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVE-MLINKQDVNGN 85 (255)
Q Consensus 7 ~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~-~~i~~~d~~G~ 85 (255)
+.+|+ +|+||||+|+..|+.+++++|++++++. +.+|..|+||||+|+..|+ .+++++|+ +.+ .+++.+|..|.
T Consensus 38 ~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~--~~~~~~Ll-~~~~~~~~~~~~~g~ 112 (237)
T 3b7b_A 38 DTCSE-DQRTPLMEAAENNHLEAVKYLIKAGALV-DPKDAEGSTCLHLAAKKGH--YEVVQYLL-SNGQMDVNCQDDGGW 112 (237)
T ss_dssp TCCCT-TCCCHHHHHHHTTCHHHHHHHHTTTCCC-CCCCTTSCCHHHHHHHTTC--HHHHHHHH-TTTCCCTTCCCTTSC
T ss_pred CccCC-CCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCCcHHHHHHHcCC--HHHHHHHH-hCCCCCcccCCCCCC
Confidence 44555 6666666666666666666666666555 5556666666666666666 66666665 333 55666666666
Q ss_pred chhHHHHHhhhh
Q 042220 86 TPLHVLAAVLQK 97 (255)
Q Consensus 86 TpLh~A~~~~~~ 97 (255)
||||+|++.++.
T Consensus 113 t~L~~A~~~~~~ 124 (237)
T 3b7b_A 113 TPMIWATEYKHV 124 (237)
T ss_dssp CHHHHHHHTTCH
T ss_pred CHHHHHHHcCCH
Confidence 666666655443
No 66
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.62 E-value=5.9e-16 Score=128.65 Aligned_cols=89 Identities=17% Similarity=0.192 Sum_probs=81.2
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccC-CC
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQD-VN 83 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d-~~ 83 (255)
.++.+|. +|+||||+|+..|+.+++++|++.++++ +.+|.+|+||||+|+..|+ .+++++|+ +.|++++.+| .+
T Consensus 46 ~~~~~d~-~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-n~~d~~g~tpLh~A~~~g~--~~~v~~Ll-~~ga~~~~~~~~~ 120 (229)
T 2vge_A 46 DPSQPNE-EGITALHNAICGANYSIVDFLITAGANV-NSPDSHGWTPLHCAASCND--TVICMALV-QHGAAIFATTLSD 120 (229)
T ss_dssp CTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTC--HHHHHHHH-TTTCCTTCCCSST
T ss_pred CCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCcccccCCC
Confidence 3567888 9999999999999999999999999998 8899999999999999999 99999999 7899999987 69
Q ss_pred CCchhHHH--HHhhhhc
Q 042220 84 GNTPLHVL--AAVLQKE 98 (255)
Q Consensus 84 G~TpLh~A--~~~~~~~ 98 (255)
|+||||+| +..++.+
T Consensus 121 g~tpL~~A~a~~~~~~~ 137 (229)
T 2vge_A 121 GATAFEKCDPYREGYAD 137 (229)
T ss_dssp TCCTGGGCCTTSTTHHH
T ss_pred CCCHHHHHHHHhcChHH
Confidence 99999999 7765544
No 67
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.62 E-value=3.4e-16 Score=133.50 Aligned_cols=140 Identities=11% Similarity=0.077 Sum_probs=94.7
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHH-----HhCCchHHHHHHHhhhhhhhhhcc
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAM-----ASSNLFQLHSRLRNRSVEMLINKQ 80 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~-----~~g~~~~~~~~~Ll~~~~~~i~~~ 80 (255)
++.+|+ +|+||||+|+..|+.++++.|++.++...+.+|..|+||||+|+ ..++ .++++.|+ +.|.+.+..
T Consensus 104 ~n~~d~-~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~--~~~v~~Ll-~~g~~~~~~ 179 (276)
T 4hbd_A 104 VNIADS-NGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDD--IETVLQLF-RLGNINAKA 179 (276)
T ss_dssp HTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHH--HHHHHHHH-HHSCTTCCC
T ss_pred CcCCCC-CCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhh--HHHHHHHH-HcCCCcccc
Confidence 678899 99999999999999999999999998333777888888888877 4455 67777776 566777777
Q ss_pred CCCCCchhHHHHHhhhhc------cchhhhHHHHhhccchHHHHHHHHHHHHHhccCC-CCCccCCCCCCCccccc
Q 042220 81 DVNGNTPLHVLAAVLQKE------KTAVEEGEIKELKPRHTIVATLIATVTFAAGFTL-PGGYWGKEGPIPGTSIL 149 (255)
Q Consensus 81 d~~G~TpLh~A~~~~~~~------~~~~~~~~~~~~~~~~~vvA~Liatvtf~a~l~~-PGg~~~~~~~~~g~~~~ 149 (255)
|.+|+||||+|+..++.+ +...+.+...+.+++.++.|+.-........+-. +|...+..+.++.+|+.
T Consensus 180 ~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~ 255 (276)
T 4hbd_A 180 SQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALM 255 (276)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHH
Confidence 777888888887776544 1111111222345566666665554444444444 66665555555555553
No 68
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.61 E-value=8.9e-16 Score=129.39 Aligned_cols=141 Identities=13% Similarity=0.028 Sum_probs=76.1
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhh--------------
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNR-------------- 71 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~-------------- 71 (255)
++.+|+ +|+||||+|++.|+.++++.|+++++++ +.+|.+|+||||+|+..|+ .+++++|++
T Consensus 29 ~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~--~~~v~~Ll~~g~~~~~~~~g~t~ 104 (261)
T 2xai_A 29 VNIITA-DHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVSGS--WDCVNLLLQHGASVQPESDLASP 104 (261)
T ss_dssp SSCCCT-TCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTC--HHHHHHHHHTTCCSSCSCTTCCH
T ss_pred CCCcCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCC--HHHHHHHHHCCCCCCCCCCCCCH
Confidence 445555 6666666666666666666666666655 5556666666666666655 555555551
Q ss_pred -----------------hhhhhhhccCCCCCchhHHHHHhhhhc------cchhhhHHHHhhccchHHHHHHHHHHHHHh
Q 042220 72 -----------------SVEMLINKQDVNGNTPLHVLAAVLQKE------KTAVEEGEIKELKPRHTIVATLIATVTFAA 128 (255)
Q Consensus 72 -----------------~~~~~i~~~d~~G~TpLh~A~~~~~~~------~~~~~~~~~~~~~~~~~vvA~Liatvtf~a 128 (255)
+.|.+++.+|.+|+||||+|++.++.+ +...+.. ..+.+++.++.|+.-.......
T Consensus 105 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~g~t~Lh~A~~~~~~~~v~ 183 (261)
T 2xai_A 105 IHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN-QGKGQDSPLHAVARTASEELAC 183 (261)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTT-CCBTTBCHHHHHHHHTCHHHHH
T ss_pred HHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC-CCCCCCChHHHHHHcCCHHHHH
Confidence 334444444444555555554443332 0000000 1234556676666655555555
Q ss_pred ccCCCCCccCCCCCCCccccccC
Q 042220 129 GFTLPGGYWGKEGPIPGTSILIK 151 (255)
Q Consensus 129 ~l~~PGg~~~~~~~~~g~~~~~~ 151 (255)
.+-.-|...+..+.++-+|+...
T Consensus 184 ~Ll~~gad~~~~d~~g~tpl~~A 206 (261)
T 2xai_A 184 LLMDFGADTQAKNAEGKRPVELV 206 (261)
T ss_dssp HHHHTTCCTTCCCTTSCCGGGGS
T ss_pred HHHHcCCCCCCcCCCCCChhhhc
Confidence 55556766665666667777643
No 69
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.61 E-value=6.7e-16 Score=128.66 Aligned_cols=82 Identities=23% Similarity=0.290 Sum_probs=62.9
Q ss_pred CCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHH
Q 042220 13 QKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLA 92 (255)
Q Consensus 13 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~ 92 (255)
.|.||||.|+..|+.++++.|++.++++ +.+|.+|+||||+|+..|+ .+++++|+ +.|+++|.+|.+|+||||+|+
T Consensus 36 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~g~--~~~v~~Ll-~~ga~~~~~d~~g~tpL~~A~ 111 (239)
T 1ycs_B 36 LPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNAVCAGH--TEIVKFLV-QFGVNVNAADSDGWTPLHCAA 111 (239)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHHHHHTC--HHHHHHHH-HHTCCTTCCCTTCCCHHHHHH
T ss_pred hhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCCCccCCCCCCHHHHHH
Confidence 5677888888888888888888777776 6777778888888888888 78888777 567778888888888888887
Q ss_pred Hhhhhc
Q 042220 93 AVLQKE 98 (255)
Q Consensus 93 ~~~~~~ 98 (255)
..++.+
T Consensus 112 ~~~~~~ 117 (239)
T 1ycs_B 112 SCNNVQ 117 (239)
T ss_dssp HTTCHH
T ss_pred HcCCHH
Confidence 776554
No 70
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.61 E-value=2e-15 Score=131.79 Aligned_cols=86 Identities=17% Similarity=0.039 Sum_probs=74.0
Q ss_pred cee-ecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCc-hHHHHHHHhhhhhhhhhccCCC
Q 042220 6 ACI-SDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNL-FQLHSRLRNRSVEMLINKQDVN 83 (255)
Q Consensus 6 v~~-~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~-~~~~~~~Ll~~~~~~i~~~d~~ 83 (255)
++. +|+ +|+||||+|+..|+.+++++|+++++++ +.+|.+|+||||+|+..|+. -.+.++.+++....+++.+|.+
T Consensus 123 vn~~~d~-~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~ 200 (327)
T 1sw6_A 123 LNIPVDE-HGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSM 200 (327)
T ss_dssp SCSCCST-TCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTT
T ss_pred cccccCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCC
Confidence 566 788 9999999999999999999999999998 88999999999999998750 0245666664334789999999
Q ss_pred CCchhHHHHH
Q 042220 84 GNTPLHVLAA 93 (255)
Q Consensus 84 G~TpLh~A~~ 93 (255)
|+||||+|++
T Consensus 201 g~tpLh~A~~ 210 (327)
T 1sw6_A 201 NRTILHHIII 210 (327)
T ss_dssp CCCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 9999999998
No 71
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.61 E-value=8.3e-16 Score=127.23 Aligned_cols=89 Identities=25% Similarity=0.288 Sum_probs=69.9
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCc-----ccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhcc
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDC-----CKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQ 80 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~-----~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~ 80 (255)
++.+|. +|+||||+|+..|+.+++++|++.+++. .+..|..|+||||+|+..|+ .+++++|+ +.|++++.+
T Consensus 71 ~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~g~~~~~~ 146 (236)
T 1ikn_D 71 PELRDF-RGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGY--LGIVELLV-SLGADVNAQ 146 (236)
T ss_dssp SCCCCT-TCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTC--HHHHHHHH-HHTCCTTCC
T ss_pred CCCcCC-CCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCCCCC
Confidence 466777 8888888888888888888888877542 35667778888888888888 88888887 678888888
Q ss_pred CC-CCCchhHHHHHhhhhc
Q 042220 81 DV-NGNTPLHVLAAVLQKE 98 (255)
Q Consensus 81 d~-~G~TpLh~A~~~~~~~ 98 (255)
|. +|+||||+|++.++.+
T Consensus 147 ~~~~g~tpL~~A~~~~~~~ 165 (236)
T 1ikn_D 147 EPCNGRTALHLAVDLQNPD 165 (236)
T ss_dssp CTTTCCCHHHHHHHTTCHH
T ss_pred CCCCCCCHHHHHHHcCCHH
Confidence 87 8888888888876654
No 72
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.61 E-value=1.6e-15 Score=126.32 Aligned_cols=80 Identities=13% Similarity=-0.098 Sum_probs=26.5
Q ss_pred CCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHH
Q 042220 13 QKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLA 92 (255)
Q Consensus 13 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~ 92 (255)
.|.||||.|++.|+.+.++.|++++.++ + .+..|.||||.|+..|+ .++++.|+ +.|.++|.+|.+|+||||+|+
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~-~-~~~~~~t~L~~A~~~g~--~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~ 78 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRV-K-FNPLPLALLLDSSLEGE--FDLVQRII-YEVDDPSLPNDEGITALHNAV 78 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTC--HHHHHHHT-STTSSCCCCCTTSCCHHHHHH
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCc-c-cCchhhHHHHHHHHcCC--HHHHHHHH-HcCCCCCCcCCCCCCHHHHHH
Confidence 3555555555555555555555555554 2 23445555555555555 55555555 445555555555555555555
Q ss_pred Hhhhh
Q 042220 93 AVLQK 97 (255)
Q Consensus 93 ~~~~~ 97 (255)
..++.
T Consensus 79 ~~g~~ 83 (239)
T 1ycs_B 79 CAGHT 83 (239)
T ss_dssp HHTCH
T ss_pred HcCCH
Confidence 55443
No 73
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.61 E-value=7.5e-16 Score=129.23 Aligned_cols=85 Identities=22% Similarity=0.168 Sum_probs=77.5
Q ss_pred eeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccc--------------cCCchHHHHHHHhCCchHHHHHHHhhh
Q 042220 7 CISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVD--------------ERGWNLLHFAMASSNLFQLHSRLRNRS 72 (255)
Q Consensus 7 ~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d--------------~~G~t~Lh~A~~~g~~~~~~~~~Ll~~ 72 (255)
+.+|. +|+||||+|+..|+.++++.|+++++++ +.+| .+|+||||+|+..|+ .+++++|+ +
T Consensus 87 ~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~--~~~v~~Ll-~ 161 (260)
T 3jxi_A 87 RDVYY-RGQTALHIAIERRCKHYVELLVEKGADV-HAQARGRFFQPKDEGGYFYFGELPLSLAACTNQ--PHIVHYLT-E 161 (260)
T ss_dssp CCSSE-ESBCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTC--HHHHHHHH-H
T ss_pred ccccc-CCCCHHHHHHHcCCHHHHHHHHhCCCCc-CccccccccCcccccccccCCCCHHHHHHHcCC--HHHHHHHH-h
Confidence 44566 8999999999999999999999999998 6777 589999999999999 99999999 6
Q ss_pred ---hhhhhhccCCCCCchhHHHHHhhh
Q 042220 73 ---VEMLINKQDVNGNTPLHVLAAVLQ 96 (255)
Q Consensus 73 ---~~~~i~~~d~~G~TpLh~A~~~~~ 96 (255)
.|++++.+|.+|+||||+|++.++
T Consensus 162 ~~~~ga~~~~~d~~g~TpLh~A~~~~~ 188 (260)
T 3jxi_A 162 NGHKQADLRRQDSRGNTVLHALVAIAD 188 (260)
T ss_dssp CSSCCCCTTCCCTTSCCHHHHHHHHCC
T ss_pred ccccCCCCcccCCCCCcHHHHHHHhcc
Confidence 899999999999999999998643
No 74
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.61 E-value=2e-16 Score=127.53 Aligned_cols=80 Identities=10% Similarity=-0.039 Sum_probs=60.0
Q ss_pred CCCCCcHHHHHHHcC----hHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCc----hHHHHHHHhhhhhhhhhccCC
Q 042220 11 NDQKMTALLLAAGRG----HIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNL----FQLHSRLRNRSVEMLINKQDV 82 (255)
Q Consensus 11 ~~~G~tpLh~Aa~~g----~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~----~~~~~~~Ll~~~~~~i~~~d~ 82 (255)
. .|+||||+|+.+| +.+++++|+++++++ +.+|.+|+||||+|+..++. ..+++++|+ +.|+++|.+|.
T Consensus 36 ~-~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll-~~Gadin~~d~ 112 (186)
T 3t8k_A 36 V-LKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLFFPLFQGGGNDITGTTELCKIFL-EKGADITALYK 112 (186)
T ss_dssp H-HTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHH-HTTCCSSSCBG
T ss_pred c-CCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHH-HCCCCCCccCC
Confidence 5 6788888888776 377888888888877 77778888888888877751 135677777 67788888888
Q ss_pred CCC-chhHHHHH
Q 042220 83 NGN-TPLHVLAA 93 (255)
Q Consensus 83 ~G~-TpLh~A~~ 93 (255)
+|+ ||||+|+.
T Consensus 113 ~g~ttpLh~A~~ 124 (186)
T 3t8k_A 113 PYKIVVFKNIFN 124 (186)
T ss_dssp GGTBCTTGGGGG
T ss_pred CcCchHHHHHHH
Confidence 887 88888776
No 75
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.61 E-value=1.2e-15 Score=127.75 Aligned_cols=81 Identities=20% Similarity=0.126 Sum_probs=75.1
Q ss_pred CCcHHHHHHHcChHHHHHHHHH---hCCCcccccccCCchHHHHHHH--hCCchHH-------HHHHHhhhhhhhh----
Q 042220 14 KMTALLLAAGRGHIRVVNEIIS---TCPDCCKQVDERGWNLLHFAMA--SSNLFQL-------HSRLRNRSVEMLI---- 77 (255)
Q Consensus 14 G~tpLh~Aa~~g~~~~v~~Ll~---~~~~~~~~~d~~G~t~Lh~A~~--~g~~~~~-------~~~~Ll~~~~~~i---- 77 (255)
|+||||+|+..|+.+++++|++ +++++ +.+|.+|+||||+|+. .++ .+ ++++|+ +.|+++
T Consensus 136 g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~-n~~d~~g~TpLh~A~~~~~~~--~~~~~~~~~iv~~Ll-~~ga~~~~~~ 211 (256)
T 2etb_A 136 GELPLSLAACTKQWDVVTYLLENPHQPASL-EATDSLGNTVLHALVMIADNS--PENSALVIHMYDGLL-QMGARLCPTV 211 (256)
T ss_dssp CSSHHHHHHHTTCHHHHHHHHHCSSCCCCT-TCCCTTSCCHHHHHHHHCCSC--HHHHHHHHHHHHHHH-HHHHHHSTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHhccccCCCc-CccCCCCCCHHHHHHHcccCC--chhhHHHHHHHHHHH-HcCCCccccc
Confidence 9999999999999999999999 88888 8899999999999999 677 77 999998 789999
Q ss_pred ---hccCCCCCchhHHHHHhhhhc
Q 042220 78 ---NKQDVNGNTPLHVLAAVLQKE 98 (255)
Q Consensus 78 ---~~~d~~G~TpLh~A~~~~~~~ 98 (255)
+.+|.+|+||||+|++.++.+
T Consensus 212 ~~~~~~d~~g~tpL~~A~~~g~~~ 235 (256)
T 2etb_A 212 QLEEISNHQGLTPLKLAAKEGKIE 235 (256)
T ss_dssp CGGGCCCTTSCCHHHHHHHTTCHH
T ss_pred ccccccCCCCCCHHHHHHHhCCHH
Confidence 999999999999999996654
No 76
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.61 E-value=9.5e-16 Score=126.31 Aligned_cols=86 Identities=24% Similarity=0.198 Sum_probs=77.8
Q ss_pred eeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCccccccc-------------CCchHHHHHHHhCCchHHHHHHHhhhh
Q 042220 7 CISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDE-------------RGWNLLHFAMASSNLFQLHSRLRNRSV 73 (255)
Q Consensus 7 ~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~-------------~G~t~Lh~A~~~g~~~~~~~~~Ll~~~ 73 (255)
+.+|. +|+||||+|+..|+.+++++|+++++++ +.++. +|+||||+|+..|+ .+++++|+ +.
T Consensus 69 ~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~ 143 (232)
T 2rfa_A 69 TSELY-EGQTALHIAVINQNVNLVRALLARGASV-SARATGSVFHYRPHNLIYYGEHPLSFAACVGS--EEIVRLLI-EH 143 (232)
T ss_dssp CSTTT-TTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTC--HHHHHHHH-HT
T ss_pred cccCC-CCcCHHHHHHHcCCHHHHHHHHhCCCCC-CcccCCcceeecccccccCCCCHHHHHHHcCC--HHHHHHHH-HC
Confidence 45677 8999999999999999999999999987 55554 79999999999999 99999999 78
Q ss_pred hhhhhccCCCCCchhHHHHHhhhh
Q 042220 74 EMLINKQDVNGNTPLHVLAAVLQK 97 (255)
Q Consensus 74 ~~~i~~~d~~G~TpLh~A~~~~~~ 97 (255)
|++++.+|.+|+||||+|+..++.
T Consensus 144 ga~~~~~d~~g~t~L~~A~~~~~~ 167 (232)
T 2rfa_A 144 GADIRAQDSLGNTVLHILILQPNK 167 (232)
T ss_dssp TCCTTCCCTTSCCHHHHHHTCSCH
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCh
Confidence 999999999999999999998543
No 77
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.60 E-value=7.7e-16 Score=138.71 Aligned_cols=88 Identities=17% Similarity=0.202 Sum_probs=67.9
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
++.+|+ .|+||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+..|+ .+++++|+ +.|.++|.+|.+|+
T Consensus 7 ~~~~~~-~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~~~~~~t~L~~A~~~g~--~~~v~~Ll-~~g~~~~~~~~~g~ 81 (437)
T 1n11_A 7 GGGGGE-SGLTPLHVASFMGHLPIVKNLLQRGASP-NVSNVKVETPLHMAARAGH--TEVAKYLL-QNKAKVNAKAKDDQ 81 (437)
T ss_dssp ---------CCHHHHHHHHTCHHHHHHHHHTTCCS-CCSSSCCCCHHHHHHHHTC--HHHHHHHH-HHTCCSSCCCTTSC
T ss_pred ccccCC-CCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCC--HHHHHHHH-hCCCCCCCCCCCCC
Confidence 456777 8888888888888888888888888877 6778888888888888888 88888888 67888888888888
Q ss_pred chhHHHHHhhhhc
Q 042220 86 TPLHVLAAVLQKE 98 (255)
Q Consensus 86 TpLh~A~~~~~~~ 98 (255)
||||+|++.++.+
T Consensus 82 t~L~~A~~~g~~~ 94 (437)
T 1n11_A 82 TPLHCAARIGHTN 94 (437)
T ss_dssp CHHHHHHHHTCHH
T ss_pred CHHHHHHHCCCHH
Confidence 8888888886654
No 78
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.60 E-value=1.3e-15 Score=127.65 Aligned_cols=82 Identities=20% Similarity=0.141 Sum_probs=75.2
Q ss_pred ecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccC-------------CchHHHHHHHhCCchHHHHHHHhhh--h
Q 042220 9 SDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDER-------------GWNLLHFAMASSNLFQLHSRLRNRS--V 73 (255)
Q Consensus 9 ~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~-------------G~t~Lh~A~~~g~~~~~~~~~Ll~~--~ 73 (255)
+|. +|+||||+|+..|+.++++.|+++++++ +.+|.. |+||||+|+..|+ .+++++|++. .
T Consensus 86 ~d~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~--~~~v~~Ll~~~~~ 161 (256)
T 2etb_A 86 EFY-QGHSALHIAIEKRSLQCVKLLVENGADV-HLRACGRFFQKHQGTCFYFGELPLSLAACTKQ--WDVVTYLLENPHQ 161 (256)
T ss_dssp TTT-TTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTC--HHHHHHHHHCSSC
T ss_pred ccc-cCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcccccccccccccccccCCCCHHHHHHHcCC--HHHHHHHHhcccc
Confidence 345 7999999999999999999999999998 777776 9999999999999 9999999932 8
Q ss_pred hhhhhccCCCCCchhHHHHHh
Q 042220 74 EMLINKQDVNGNTPLHVLAAV 94 (255)
Q Consensus 74 ~~~i~~~d~~G~TpLh~A~~~ 94 (255)
|+++|.+|.+|+||||+|++.
T Consensus 162 ga~~n~~d~~g~TpLh~A~~~ 182 (256)
T 2etb_A 162 PASLEATDSLGNTVLHALVMI 182 (256)
T ss_dssp CCCTTCCCTTSCCHHHHHHHH
T ss_pred CCCcCccCCCCCCHHHHHHHc
Confidence 999999999999999999984
No 79
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.60 E-value=4.3e-16 Score=133.34 Aligned_cols=87 Identities=15% Similarity=0.051 Sum_probs=77.7
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCC
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNG 84 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G 84 (255)
.++.+|. +|+||||+|+..|+.++++.|+++++++ +.+ +|+||||+|+..|+ .+++++|+ +.|++++.+|.+|
T Consensus 23 ~~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~--~g~t~L~~A~~~g~--~~~v~~Ll-~~ga~~~~~d~~g 95 (285)
T 3kea_A 23 DTFKADV-HGHSASYYAIADNNVRLVCTLLNAGALK-NLL--ENEFPLHQAATLED--TKIVKILL-FSGLDDSQFDDKG 95 (285)
T ss_dssp TTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTGGG-SCC--TTCCHHHHHTTSSS--CHHHHHHH-HTTCCTTCCCTTS
T ss_pred CCCccCC-CCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCC--CCCCHHHHHHHcCC--HHHHHHHH-HCCCCCCCcCCCC
Confidence 3578888 9999999999999999999999998887 444 49999999999999 99999999 7899999999999
Q ss_pred CchhHHHHHhhhhc
Q 042220 85 NTPLHVLAAVLQKE 98 (255)
Q Consensus 85 ~TpLh~A~~~~~~~ 98 (255)
+||||+|+..++.+
T Consensus 96 ~t~L~~A~~~g~~~ 109 (285)
T 3kea_A 96 NTALYYAVDSGNMQ 109 (285)
T ss_dssp CCHHHHHHHTTCHH
T ss_pred CcHHHHHHHcCCHH
Confidence 99999999987655
No 80
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.60 E-value=1.7e-15 Score=128.15 Aligned_cols=84 Identities=24% Similarity=0.239 Sum_probs=77.1
Q ss_pred ecCCCCCcHHHHHHHcChHHHHHHHHHhCCCccccccc--------------CCchHHHHHHHhCCchHHHHHHHhhh--
Q 042220 9 SDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDE--------------RGWNLLHFAMASSNLFQLHSRLRNRS-- 72 (255)
Q Consensus 9 ~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~--------------~G~t~Lh~A~~~g~~~~~~~~~Ll~~-- 72 (255)
+|. +|+||||+|++.|+.+++++|+++++++ +.+|. .|+||||+|+..|+ .+++++|++.
T Consensus 97 ~d~-~g~tpL~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~--~~~v~~Ll~~~~ 172 (273)
T 2pnn_A 97 SYY-KGQTALHIAIERRNMTLVTLLVENGADV-QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQ--LAIVKFLLQNSW 172 (273)
T ss_dssp TTT-TTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTC--HHHHHHHHHCSS
T ss_pred ccC-CCCCHHHHHHHcCCHHHHHHHHHCCCCc-CccccccccccccccccccCCCCHHHHHHHcCC--HHHHHHHHhccc
Confidence 566 8999999999999999999999999998 67776 79999999999999 9999999932
Q ss_pred hhhhhhccCCCCCchhHHHHHhhh
Q 042220 73 VEMLINKQDVNGNTPLHVLAAVLQ 96 (255)
Q Consensus 73 ~~~~i~~~d~~G~TpLh~A~~~~~ 96 (255)
.|++++.+|.+|+||||+|++.++
T Consensus 173 ~gad~~~~d~~g~tpLh~A~~~~~ 196 (273)
T 2pnn_A 173 QPADISARDSVGNTVLHALVEVAD 196 (273)
T ss_dssp CCCCTTCCCTTSCCHHHHHHHHCC
T ss_pred CCCCceeeCCCCCcHHHHHHHccC
Confidence 899999999999999999999754
No 81
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.59 E-value=2.2e-15 Score=130.76 Aligned_cols=90 Identities=29% Similarity=0.279 Sum_probs=83.4
Q ss_pred CcceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCC
Q 042220 4 SAACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVN 83 (255)
Q Consensus 4 ~~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~ 83 (255)
..++.+|. +|+||||+|+..|+.+++++|+++++++ +.+|.+|+||||+|+..|+ .+++++|+ +.|.+++.+|.+
T Consensus 49 ~~~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~--~~iv~~Ll-~~g~~~~~~~~~ 123 (351)
T 3utm_A 49 VNCHASDG-RKSTPLHLAAGYNRVRIVQLLLQHGADV-HAKDKGGLVPLHNACSYGH--YEVTELLL-KHGACVNAMDLW 123 (351)
T ss_dssp TTCCCSST-TCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTC--HHHHHHHH-HTTCCTTCCCTT
T ss_pred CCcccCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHCCC--HHHHHHHH-HCCCCCCCCCCC
Confidence 34567888 9999999999999999999999999998 8899999999999999999 99999999 789999999999
Q ss_pred CCchhHHHHHhhhhc
Q 042220 84 GNTPLHVLAAVLQKE 98 (255)
Q Consensus 84 G~TpLh~A~~~~~~~ 98 (255)
|.||||+|++.++.+
T Consensus 124 g~t~L~~A~~~~~~~ 138 (351)
T 3utm_A 124 QFTPLHEAASKNRVE 138 (351)
T ss_dssp CCCHHHHHHHTTCHH
T ss_pred CCCHHHHHHHcCCHH
Confidence 999999999987654
No 82
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.59 E-value=1.6e-15 Score=131.22 Aligned_cols=84 Identities=19% Similarity=0.173 Sum_probs=78.8
Q ss_pred ecCCCCCcHHHHHHHc---ChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 9 SDNDQKMTALLLAAGR---GHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 9 ~d~~~G~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
+|. +|+||||+|+.. |+.+++++|+++++++ +.+|.+|+||||+|+..|+ .+++++|+ +.|++++.+|.+|+
T Consensus 186 ~~~-~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d~~G~TpLh~A~~~g~--~~~v~~Ll-~~gad~~~~d~~G~ 260 (301)
T 2b0o_E 186 AQA-PEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNTALHYAALYNQ--PDCLKLLL-KGRALVGTVNEAGE 260 (301)
T ss_dssp SCS-CEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCCTTCCCHHHHHHHTTC--HHHHHHHH-HTTCCCSCCCTTSC
T ss_pred cCC-CCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCCCCcCCCCC
Confidence 477 899999999997 8999999999999998 8899999999999999999 99999999 78999999999999
Q ss_pred chhHHHHHhhhh
Q 042220 86 TPLHVLAAVLQK 97 (255)
Q Consensus 86 TpLh~A~~~~~~ 97 (255)
||||+|+..++.
T Consensus 261 TpL~~A~~~~~~ 272 (301)
T 2b0o_E 261 TALDIARKKHHK 272 (301)
T ss_dssp CHHHHHHHHTCH
T ss_pred CHHHHHHHcCCH
Confidence 999999998554
No 83
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.59 E-value=5e-16 Score=130.07 Aligned_cols=81 Identities=23% Similarity=0.299 Sum_probs=75.5
Q ss_pred CCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccC-CCCCchhHHH
Q 042220 13 QKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQD-VNGNTPLHVL 91 (255)
Q Consensus 13 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d-~~G~TpLh~A 91 (255)
+|+||||+|++.|+.++++.|++ +.++ +.+|.+|+||||+|+..|+ .+++++|+ +.|+++|.+| .+|+||||+|
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~g~--~~~v~~Ll-~~ga~~~~~~~~~g~t~L~~A 118 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGS--DKCVRLLA-EAGADLDHRDMRGGLTALHMA 118 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCTTSCBHHHHHHHHTC--HHHHHHHH-HTTCCTTCCCSSSCCCHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCCCCCCHHHHHHHCCC--HHHHHHHH-HcCCCCCcCCCCCCCCHHHHH
Confidence 68999999999999999999999 8877 8899999999999999999 99999999 7899999998 8899999999
Q ss_pred HHhhhhc
Q 042220 92 AAVLQKE 98 (255)
Q Consensus 92 ~~~~~~~ 98 (255)
+..++.+
T Consensus 119 ~~~g~~~ 125 (244)
T 3ui2_A 119 AGYVRPE 125 (244)
T ss_dssp HHTTCHH
T ss_pred HHcCCHH
Confidence 9986654
No 84
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.58 E-value=1.8e-15 Score=133.13 Aligned_cols=88 Identities=17% Similarity=0.145 Sum_probs=76.5
Q ss_pred ceeecCCCCCcHHHHHHHcC--hHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhh-----hh
Q 042220 6 ACISDNDQKMTALLLAAGRG--HIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEML-----IN 78 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g--~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~-----i~ 78 (255)
.+.+|. +|+||||+|+..| +.+++++|+++++++ +.+|.+|+||||+|+..|+ .+++++|+ +.+.+ +|
T Consensus 131 ~~~~~~-~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~~~g~--~~~v~~Ll-~~g~~~~~~~~~ 205 (364)
T 3ljn_A 131 SHVKHC-KGQTALHWCVGLGPEYLEMIKILVQLGASP-TAKDKADETPLMRAMEFRN--REALDLMM-DTVPSKSSLRLD 205 (364)
T ss_dssp TEEEEE-SCCCHHHHHHHSCGGGHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHTTC--HHHHHHHH-HHCSCSSSCCTT
T ss_pred cccCCC-CCCCHHHHHHHcCCchHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCC--HHHHHHHH-hccccccccccc
Confidence 466788 8999999999999 899999999998888 7888899999999999999 99999988 66777 88
Q ss_pred ccCCCCCchhHHHHHhhhhc
Q 042220 79 KQDVNGNTPLHVLAAVLQKE 98 (255)
Q Consensus 79 ~~d~~G~TpLh~A~~~~~~~ 98 (255)
.+|.+|+||||+|++.++.+
T Consensus 206 ~~~~~g~t~L~~A~~~g~~~ 225 (364)
T 3ljn_A 206 YANKQGNSHLHWAILINWED 225 (364)
T ss_dssp CCCTTCCCTTHHHHTTTCHH
T ss_pred ccCCCCCcHHHHHHHcCCHH
Confidence 99999999999999887665
No 85
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.58 E-value=6.3e-15 Score=124.09 Aligned_cols=84 Identities=17% Similarity=0.050 Sum_probs=78.2
Q ss_pred cCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhH
Q 042220 10 DNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLH 89 (255)
Q Consensus 10 d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh 89 (255)
|. .|+||||+|++.|+.+++++|+++++++ +.+|.+|+||||+|+..|+ .+++++|+ +.|.+++.+|.+|.||||
T Consensus 36 ~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~g~~~~~~~~~g~t~L~ 110 (285)
T 1wdy_A 36 EE-GGWTPLHNAVQMSREDIVELLLRHGADP-VLRKKNGATPFLLAAIAGS--VKLLKLFL-SKGADVNECDFYGFTAFM 110 (285)
T ss_dssp TT-TCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTC--HHHHHHHH-HTTCCTTCBCTTCCBHHH
T ss_pred CC-CCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCCCccCcccCCHHH
Confidence 66 8999999999999999999999999988 7889999999999999999 99999999 789999999999999999
Q ss_pred HHHHhhhhc
Q 042220 90 VLAAVLQKE 98 (255)
Q Consensus 90 ~A~~~~~~~ 98 (255)
+|++.++.+
T Consensus 111 ~A~~~~~~~ 119 (285)
T 1wdy_A 111 EAAVYGKVK 119 (285)
T ss_dssp HHHHTTCHH
T ss_pred HHHHhCCHH
Confidence 999987654
No 86
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.58 E-value=1.7e-15 Score=136.46 Aligned_cols=88 Identities=23% Similarity=0.208 Sum_probs=81.4
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
++.+|. .|+||||+|++.|+.+++++|+++++++ +.+|.+|+||||+|+..|+ .+++++|+ +.|++++.+|..|.
T Consensus 40 ~~~~~~-~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~--~~~v~~Ll-~~ga~~~~~~~~g~ 114 (437)
T 1n11_A 40 PNVSNV-KVETPLHMAARAGHTEVAKYLLQNKAKV-NAKAKDDQTPLHCAARIGH--TNMVKLLL-ENNANPNLATTAGH 114 (437)
T ss_dssp SCCSSS-CCCCHHHHHHHHTCHHHHHHHHHHTCCS-SCCCTTSCCHHHHHHHHTC--HHHHHHHH-HHTCCTTCCCTTCC
T ss_pred CCCCCC-CCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHCCC--HHHHHHHH-hCCCCCCCCCCCCC
Confidence 456778 8999999999999999999999999998 8899999999999999999 99999999 78999999999999
Q ss_pred chhHHHHHhhhhc
Q 042220 86 TPLHVLAAVLQKE 98 (255)
Q Consensus 86 TpLh~A~~~~~~~ 98 (255)
||||+|++.++.+
T Consensus 115 t~L~~A~~~g~~~ 127 (437)
T 1n11_A 115 TPLHIAAREGHVE 127 (437)
T ss_dssp CHHHHHHHHTCHH
T ss_pred cHHHHHHHcCCHH
Confidence 9999999987765
No 87
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.58 E-value=1.7e-15 Score=139.59 Aligned_cols=84 Identities=20% Similarity=0.197 Sum_probs=79.2
Q ss_pred cCCCCCcHHHHHHH---cChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCc
Q 042220 10 DNDQKMTALLLAAG---RGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNT 86 (255)
Q Consensus 10 d~~~G~tpLh~Aa~---~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~T 86 (255)
|. +|+||||+|++ .|+.+++++|+++++++ +.+|.+|+||||+|+..|+ .+++++|+ +.|+++|.+|.+|+|
T Consensus 168 ~~-~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v-n~~d~~g~TpLh~A~~~g~--~~~v~~Ll-~~ga~~~~~d~~g~t 242 (497)
T 3lvq_E 168 QA-PEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNTALHYAALYNQ--PDCLKLLL-KGRALVGTVNEAGET 242 (497)
T ss_dssp CC-SCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-TCCCSSSCCHHHHHTTTTC--HHHHHHHH-HTCCCCSCCCTTCCC
T ss_pred cc-ccchHHHHHHHhcccccHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHcCC--HHHHHHHH-HcCCCCCCcCCCCCC
Confidence 67 89999999966 99999999999999998 8899999999999999999 99999999 789999999999999
Q ss_pred hhHHHHHhhhhc
Q 042220 87 PLHVLAAVLQKE 98 (255)
Q Consensus 87 pLh~A~~~~~~~ 98 (255)
|||+|+..++.+
T Consensus 243 pl~~A~~~~~~~ 254 (497)
T 3lvq_E 243 ALDIARKKHHKE 254 (497)
T ss_dssp HHHHHHHTTCHH
T ss_pred HHHHHHHcCCHH
Confidence 999999987655
No 88
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.58 E-value=4.3e-15 Score=124.58 Aligned_cols=85 Identities=20% Similarity=0.119 Sum_probs=75.3
Q ss_pred CCCCCcHHHHHHHcChHHHHHHHHH---hCCCcccccccCCchHHHHHHHhCCch-------HHHHHHHhhhhhhhh---
Q 042220 11 NDQKMTALLLAAGRGHIRVVNEIIS---TCPDCCKQVDERGWNLLHFAMASSNLF-------QLHSRLRNRSVEMLI--- 77 (255)
Q Consensus 11 ~~~G~tpLh~Aa~~g~~~~v~~Ll~---~~~~~~~~~d~~G~t~Lh~A~~~g~~~-------~~~~~~Ll~~~~~~i--- 77 (255)
. +|+||||+|+..|+.+++++|++ .+.++ +.+|.+|+||||+|+..++.. .+++++|+ +.|+++
T Consensus 138 ~-~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~-~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll-~~ga~~~~~ 214 (260)
T 3jxi_A 138 Y-FGELPLSLAACTNQPHIVHYLTENGHKQADL-RRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLL-IKCAKLFPD 214 (260)
T ss_dssp C-SCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT-TCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHH-HHHHHHCTT
T ss_pred c-CCCCHHHHHHHcCCHHHHHHHHhccccCCCC-cccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHH-HhCcccccc
Confidence 5 79999999999999999999999 88888 889999999999999877611 37888888 789998
Q ss_pred ----hccCCCCCchhHHHHHhhhhc
Q 042220 78 ----NKQDVNGNTPLHVLAAVLQKE 98 (255)
Q Consensus 78 ----~~~d~~G~TpLh~A~~~~~~~ 98 (255)
+.+|.+|+||||+|++.++.+
T Consensus 215 ~~~~~~~d~~g~tpL~~A~~~g~~~ 239 (260)
T 3jxi_A 215 TNLEALLNNDGLSPLMMAAKTGKIG 239 (260)
T ss_dssp CCGGGCCCTTSCCHHHHHHHTTCHH
T ss_pred cchhhcccCCCCCHHHHHHHcCCHH
Confidence 789999999999999996654
No 89
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.58 E-value=2.8e-15 Score=131.99 Aligned_cols=87 Identities=16% Similarity=0.164 Sum_probs=81.4
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCC-----cccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhcc
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPD-----CCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQ 80 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~-----~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~ 80 (255)
++.+|. +|+||||+|+..|+.+++++|++++++ + +.+|..|+||||+|+..|+ .+++++|+ +.|++++.+
T Consensus 166 ~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~~~~~~g~t~L~~A~~~g~--~~~v~~Ll-~~gad~~~~ 240 (364)
T 3ljn_A 166 PTAKDK-ADETPLMRAMEFRNREALDLMMDTVPSKSSLRL-DYANKQGNSHLHWAILINW--EDVAMRFV-EMGIDVNME 240 (364)
T ss_dssp TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCT-TCCCTTCCCTTHHHHTTTC--HHHHHHHH-TTTCCTTCC
T ss_pred CcccCC-CCCCHHHHHHHcCCHHHHHHHHhcccccccccc-cccCCCCCcHHHHHHHcCC--HHHHHHHH-HcCCCCCCC
Confidence 567788 999999999999999999999999988 6 7899999999999999999 99999999 789999999
Q ss_pred CCCCCchhHHHHHhhhh
Q 042220 81 DVNGNTPLHVLAAVLQK 97 (255)
Q Consensus 81 d~~G~TpLh~A~~~~~~ 97 (255)
|.+|+||||+|++.++.
T Consensus 241 d~~g~tpL~~A~~~g~~ 257 (364)
T 3ljn_A 241 DNEHTVPLYLSVRAAMV 257 (364)
T ss_dssp CTTSCCHHHHHHHTCCH
T ss_pred CCCCCCHHHHHHHhChH
Confidence 99999999999998543
No 90
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.57 E-value=4.6e-15 Score=131.90 Aligned_cols=87 Identities=16% Similarity=0.181 Sum_probs=75.8
Q ss_pred ceeec--CCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCC
Q 042220 6 ACISD--NDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVN 83 (255)
Q Consensus 6 v~~~d--~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~ 83 (255)
++.+| . +|+||||+|+..|+.+++++|+++++++ +.+|.+|+||||+|+..|+ .+++++|+ +.|++++.+|.+
T Consensus 226 vn~~~~~~-~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~~d~~G~TpLh~A~~~g~--~~~v~~LL-~~Gad~~~~d~~ 300 (368)
T 3jue_A 226 VNWVNGGQ-DNATPLIQATAANSLLACEFLLQNGANV-NQADSAGRGPLHHATILGH--TGLACLFL-KRGADLGARDSE 300 (368)
T ss_dssp TTCCCTTT-TCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTC--HHHHHHHH-HTTCCTTCCCTT
T ss_pred CCcccccc-CCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCc--HHHHHHHH-HCcCCCCCcCCC
Confidence 34555 6 7899999999999999999999999888 7889999999999999999 99999998 678999999999
Q ss_pred CCchhHHHHHhhhh
Q 042220 84 GNTPLHVLAAVLQK 97 (255)
Q Consensus 84 G~TpLh~A~~~~~~ 97 (255)
|+||||+|+..++.
T Consensus 301 G~TpL~~A~~~g~~ 314 (368)
T 3jue_A 301 GRDPLTIAMETANA 314 (368)
T ss_dssp SCCHHHHHHHTTCH
T ss_pred CCCHHHHHHHCCCH
Confidence 99999999988554
No 91
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.57 E-value=1.1e-15 Score=123.29 Aligned_cols=77 Identities=16% Similarity=0.017 Sum_probs=55.5
Q ss_pred CCcHHHHHHHcChHHHHHHHHHhCCCcccccc-cCCchHHHHHHHhCCchH----HHHHHHhhhhhhhhhccCCCCCchh
Q 042220 14 KMTALLLAAGRGHIRVVNEIISTCPDCCKQVD-ERGWNLLHFAMASSNLFQ----LHSRLRNRSVEMLINKQDVNGNTPL 88 (255)
Q Consensus 14 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d-~~G~t~Lh~A~~~g~~~~----~~~~~Ll~~~~~~i~~~d~~G~TpL 88 (255)
+.++||.|++.|+.+.++.+++.+++ .+| .+|+||||+|+.+++ . +++++|+ +.|+++|.+|.+|+|||
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~---~~~~~~g~T~Lh~A~~~~~--~~~~~~iv~~Ll-~~Gadvn~~d~~g~TpL 79 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYE---DKESVLKSNILYDVLRNNN--DEARYKISMFLI-NKGADIKSRTKEGTTLF 79 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSS---CHHHHHTTTHHHHHTTCSC--HHHHHHHHHHHH-HTTCCSSCCCTTCCCTH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcc---cccccCCCCHHHHHHHcCC--cchHHHHHHHHH-HCCCCCCCCCCCCCcHH
Confidence 45677888888888777777776643 233 667888888877776 4 3677777 67788888888888888
Q ss_pred HHHHHhhh
Q 042220 89 HVLAAVLQ 96 (255)
Q Consensus 89 h~A~~~~~ 96 (255)
|+|+..++
T Consensus 80 h~a~~~~~ 87 (186)
T 3t8k_A 80 FPLFQGGG 87 (186)
T ss_dssp HHHHHHCT
T ss_pred HHHHHcCC
Confidence 88777654
No 92
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.57 E-value=4.3e-15 Score=127.03 Aligned_cols=86 Identities=16% Similarity=0.090 Sum_probs=57.4
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
++.+|. +|+||||+|+..|+.+++++|+++++++ +.+|.+|+||||+|+..|+ .+++++|+ +.+.+++..+ +|.
T Consensus 85 ~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~g~~~~~~~-~g~ 158 (285)
T 3d9h_A 85 VNIITA-DHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVSGS--WDCVNLLL-QHGASVQPES-DLA 158 (285)
T ss_dssp SCEECT-TCCCHHHHHHHTTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTC--HHHHHHHH-HTTCCSSCSC-TTS
T ss_pred CCCcCC-CCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCH--HHHHHHHH-HCCCCCCCCC-CCC
Confidence 566677 7777777777777777777777777776 6667777777777777777 66666666 4555554433 356
Q ss_pred chhHHHHHhhhh
Q 042220 86 TPLHVLAAVLQK 97 (255)
Q Consensus 86 TpLh~A~~~~~~ 97 (255)
||||+|++.++.
T Consensus 159 t~L~~A~~~g~~ 170 (285)
T 3d9h_A 159 SPIHEAARRGHV 170 (285)
T ss_dssp CHHHHHHHHTCH
T ss_pred CHHHHHHHcCCH
Confidence 666666655443
No 93
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.56 E-value=4.2e-15 Score=119.64 Aligned_cols=87 Identities=15% Similarity=0.090 Sum_probs=77.4
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhh-hhhhccCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVE-MLINKQDVNG 84 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~-~~i~~~d~~G 84 (255)
++.+|. .|+||||+|+..|+.+++++|+++++...+.+|..|+||||+|+..|+ .+++++|+ +.+ .+++.+|.+|
T Consensus 65 ~~~~~~-~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~g~~~~~~~~~~g 140 (201)
T 3hra_A 65 INLQNS-ISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGH--IDNVKLLL-EDGREDIDFQNDFG 140 (201)
T ss_dssp TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTC--HHHHHHHH-HHCCCCTTCCCTTS
T ss_pred CCCCCC-CCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCC--HHHHHHHH-HcCCCCcCCCCCCC
Confidence 466788 999999999999999999999966654448899999999999999999 99999999 566 8999999999
Q ss_pred CchhHHHHHhhh
Q 042220 85 NTPLHVLAAVLQ 96 (255)
Q Consensus 85 ~TpLh~A~~~~~ 96 (255)
+||||+|+..++
T Consensus 141 ~t~L~~A~~~~~ 152 (201)
T 3hra_A 141 YTALIEAVGLRE 152 (201)
T ss_dssp CCHHHHHHHSSC
T ss_pred CCHHHHHHHhcc
Confidence 999999998743
No 94
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.56 E-value=3.4e-15 Score=130.29 Aligned_cols=85 Identities=14% Similarity=-0.012 Sum_probs=76.0
Q ss_pred cceeecCCCCCcHHHHHHH----cChHHHHHHHHHhCC------------------------------------------
Q 042220 5 AACISDNDQKMTALLLAAG----RGHIRVVNEIISTCP------------------------------------------ 38 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~----~g~~~~v~~Ll~~~~------------------------------------------ 38 (255)
.++.+|+ +|+||||+|++ .|+.++++.|++.+.
T Consensus 193 ~~~~~d~-~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~L 271 (327)
T 1sw6_A 193 CLILEDS-MNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWI 271 (327)
T ss_dssp GGGEECT-TCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHH
T ss_pred cccCCCC-CCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHH
Confidence 3678899 99999999999 899999999987632
Q ss_pred ---CcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhHHHHHh
Q 042220 39 ---DCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLHVLAAV 94 (255)
Q Consensus 39 ---~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh~A~~~ 94 (255)
++ +.+|.+|+||||+|+..|+ .+++++|+ +.|++++.+|.+|+||||+|++.
T Consensus 272 l~~~~-n~~d~~G~TpLh~A~~~g~--~~~v~~Ll-~~Gad~~~~d~~G~TpL~~A~~~ 326 (327)
T 1sw6_A 272 IANML-NAQDSNGDTCLNIAARLGN--ISIVDALL-DYGADPFIANKSGLRPVDFGAGL 326 (327)
T ss_dssp HHHTT-TCCCTTSCCHHHHHHHHCC--HHHHHHHH-HTTCCTTCCCTTSCCGGGGTCC-
T ss_pred HHhCC-CCCCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCCcccCCCCCCHHHHHHhc
Confidence 33 6789999999999999999 99999999 78999999999999999999875
No 95
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.54 E-value=1.2e-14 Score=122.93 Aligned_cols=83 Identities=18% Similarity=0.124 Sum_probs=73.5
Q ss_pred CCCcHHHHHHHcChHHHHHHHHH---hCCCcccccccCCchHHHHHHHhCCc-------hHHHHHHHhhhhhhhhh----
Q 042220 13 QKMTALLLAAGRGHIRVVNEIIS---TCPDCCKQVDERGWNLLHFAMASSNL-------FQLHSRLRNRSVEMLIN---- 78 (255)
Q Consensus 13 ~G~tpLh~Aa~~g~~~~v~~Ll~---~~~~~~~~~d~~G~t~Lh~A~~~g~~-------~~~~~~~Ll~~~~~~i~---- 78 (255)
+|+||||+|+..|+.+++++|++ .+.++ +.+|.+|+||||+|+..++. ..+++++|+ +.|+++|
T Consensus 147 ~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~-~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll-~~ga~~n~~~~ 224 (273)
T 2pnn_A 147 FGELPLSLAACTNQLAIVKFLLQNSWQPADI-SARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEIL-ILGAKLHPTLK 224 (273)
T ss_dssp SCBSHHHHHHHTTCHHHHHHHHHCSSCCCCT-TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHH-HHHHHHCTTCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcccCCCCc-eeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHH-Hhhhhcccccc
Confidence 79999999999999999999999 88888 88999999999999998861 136788888 7899997
Q ss_pred ---ccCCCCCchhHHHHHhhhh
Q 042220 79 ---KQDVNGNTPLHVLAAVLQK 97 (255)
Q Consensus 79 ---~~d~~G~TpLh~A~~~~~~ 97 (255)
.+|.+|+||||+|++.++.
T Consensus 225 ~~~~~d~~g~TpL~~A~~~g~~ 246 (273)
T 2pnn_A 225 LEEITNRKGLTPLALAASSGKI 246 (273)
T ss_dssp GGGCCCTTSCCHHHHHHHTTCH
T ss_pred cccccCCCCCCHHHHHHHhChH
Confidence 4899999999999998554
No 96
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.53 E-value=9.5e-15 Score=129.60 Aligned_cols=87 Identities=15% Similarity=0.079 Sum_probs=79.7
Q ss_pred eeecCCCCCcHHHHHHHcChHHHHHHHHHhC-CCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 7 CISDNDQKMTALLLAAGRGHIRVVNEIISTC-PDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 7 ~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~-~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
+.+|. .|+||||+|+..|+.+++++|++++ .++ +.+|.+|+||||+|+..|+ .+++++|+ +.|++++.+|.+|+
T Consensus 273 ~~~d~-~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~-n~~d~~g~TpL~~A~~~g~--~~iv~~Ll-~~gad~~~~d~~g~ 347 (373)
T 2fo1_E 273 DSEKY-KGRTALHYAAQVSNMPIVKYLVGEKGSNK-DKQDEDGKTPIMLAAQEGR--IEVVMYLI-QQGASVEAVDATDH 347 (373)
T ss_dssp SSSSC-CCCCTHHHHHSSCCHHHHHHHHHHSCCCT-TCCCTTCCCHHHHHHHHTC--HHHHHHHH-HTTCCSSCCCSSSC
T ss_pred Ccccc-cCCCHHHHHHHhCCHHHHHHHHHhcCCCc-cCcCCCCCCHHHHHHHcCC--HHHHHHHH-HcCCCccCCCCCCC
Confidence 34677 8999999999999999999999987 666 8899999999999999999 99999999 78999999999999
Q ss_pred chhHHHHHhhhhc
Q 042220 86 TPLHVLAAVLQKE 98 (255)
Q Consensus 86 TpLh~A~~~~~~~ 98 (255)
||||+|+++++.+
T Consensus 348 t~l~~A~~~g~~~ 360 (373)
T 2fo1_E 348 TARQLAQANNHHN 360 (373)
T ss_dssp CHHHHHHHTTCHH
T ss_pred CHHHHHHHcCCHH
Confidence 9999999986653
No 97
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.53 E-value=8.3e-15 Score=125.06 Aligned_cols=82 Identities=23% Similarity=0.213 Sum_probs=77.0
Q ss_pred eecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCch
Q 042220 8 ISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTP 87 (255)
Q Consensus 8 ~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~Tp 87 (255)
..|+ .|.||||+|+..|+.++++.|+++++++ +.+|.+|+||||+|+..|+ .+++++|+ +.|++++.+|.+|+||
T Consensus 194 ~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~d~-~~~d~~g~tpL~~A~~~~~--~~~v~~Ll-~~gad~~~~d~~g~t~ 268 (299)
T 1s70_B 194 RHAK-SGGTALHVAAAKGYTEVLKLLIQARYDV-NIKDYDGWTPLHAAAHWGK--EEACRILV-ENLCDMEAVNKVGQTA 268 (299)
T ss_dssp CCTT-TCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHTTC--HHHHHHHH-HTTCCTTCCCTTSCCT
T ss_pred hhcC-CCCCHHHHHHHCCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHhcCC--HHHHHHHH-HcCCCCCCcCCCCCCH
Confidence 3556 8999999999999999999999999998 8899999999999999999 99999999 7899999999999999
Q ss_pred hHHHHHh
Q 042220 88 LHVLAAV 94 (255)
Q Consensus 88 Lh~A~~~ 94 (255)
||+|.+.
T Consensus 269 l~~A~~~ 275 (299)
T 1s70_B 269 FDVADED 275 (299)
T ss_dssp TTSCCSG
T ss_pred HHHHHHH
Confidence 9999765
No 98
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.53 E-value=1.9e-14 Score=121.13 Aligned_cols=82 Identities=27% Similarity=0.308 Sum_probs=38.6
Q ss_pred CCCcHHHHHHHcChHHHHHHHHHh-CCCcccccccCCchHHHHHHHhCC--chHHHHHHHhhhhhhhhhccCCCCCchhH
Q 042220 13 QKMTALLLAAGRGHIRVVNEIIST-CPDCCKQVDERGWNLLHFAMASSN--LFQLHSRLRNRSVEMLINKQDVNGNTPLH 89 (255)
Q Consensus 13 ~G~tpLh~Aa~~g~~~~v~~Ll~~-~~~~~~~~d~~G~t~Lh~A~~~g~--~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh 89 (255)
.|.||||+|+..|+.+++++|+++ +.++ +.+|..|+||||+|+..++ ...+++++|+ +.|.+++.+|.+|+||||
T Consensus 147 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll-~~g~~~~~~~~~g~t~L~ 224 (285)
T 1wdy_A 147 GGATALMDAAEKGHVEVLKILLDEMGADV-NACDNMGRNALIHALLSSDDSDVEAITHLLL-DHGADVNVRGERGKTPLI 224 (285)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHTSCCCT-TCCCTTSCCHHHHHHHCSCTTTHHHHHHHHH-HTTCCSSCCCTTSCCHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCCCC-CccCCCCCCHHHHHHHccccchHHHHHHHHH-HcCCCCCCcCCCCCcHHH
Confidence 445555555555555555555544 3333 4444455555555554444 1123344444 344455555555555555
Q ss_pred HHHHhhh
Q 042220 90 VLAAVLQ 96 (255)
Q Consensus 90 ~A~~~~~ 96 (255)
+|++.++
T Consensus 225 ~A~~~~~ 231 (285)
T 1wdy_A 225 LAVEKKH 231 (285)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 5554433
No 99
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.53 E-value=1.5e-14 Score=118.92 Aligned_cols=89 Identities=18% Similarity=0.045 Sum_probs=71.6
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
++.+|+ +|.||||+|++.|+.+++++|++++++.....+..|+||||+|+..|+ .+++++|+ +.|.+++.+|..|.
T Consensus 35 ~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~--~~~v~~Ll-~~g~~~~~~~~~g~ 110 (240)
T 3eu9_A 35 VRQPDK-ENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH--LSMVVQLM-KYGADPSLIDGEGC 110 (240)
T ss_dssp TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTC--HHHHHHHH-HTTCCTTCCCTTSC
T ss_pred cCCCCC-CCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCC--HHHHHHHH-HcCCCCcccCCCCC
Confidence 456677 888888888888888888888888887755555668888888888888 88888888 67888888888888
Q ss_pred chhHHHHHhhhhc
Q 042220 86 TPLHVLAAVLQKE 98 (255)
Q Consensus 86 TpLh~A~~~~~~~ 98 (255)
||||+|++.++.+
T Consensus 111 t~l~~A~~~~~~~ 123 (240)
T 3eu9_A 111 SCIHLAAQFGHTS 123 (240)
T ss_dssp CHHHHHHHTTCHH
T ss_pred CHHHHHHHcCHHH
Confidence 8888888876544
No 100
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.52 E-value=1.8e-14 Score=124.99 Aligned_cols=85 Identities=18% Similarity=0.128 Sum_probs=63.6
Q ss_pred ecCCCCCcHHHHHHHc---ChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCC
Q 042220 9 SDNDQKMTALLLAAGR---GHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGN 85 (255)
Q Consensus 9 ~d~~~G~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~ 85 (255)
.+. .|+||||+|+.. +..++++.|++.+.++ +.+|.+|+||||+|+..|+ .+++++|+ +.|+++|.+|.+|+
T Consensus 207 ~~~-~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~--~~~v~~Ll-~~ga~~n~~d~~g~ 281 (351)
T 3utm_A 207 QPQ-SHETALHCAVASLHPKRKQVAELLLRKGANV-NEKNKDFMTPLHVAAERAH--NDVMEVLH-KHGAKMNALDSLGQ 281 (351)
T ss_dssp CTT-TCCCHHHHHHHCCSTTHHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTC--HHHHHHHH-HTTCCTTCCCTTSC
T ss_pred CCC-CCCCHHHHHHHHhCccHHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHHcCC--HHHHHHHH-HCCCCCCCcCCCCC
Confidence 445 677788887777 5567777777777776 6677777788888877777 77777777 66777777777778
Q ss_pred chhHHHHHhhhhc
Q 042220 86 TPLHVLAAVLQKE 98 (255)
Q Consensus 86 TpLh~A~~~~~~~ 98 (255)
||||+|++.++.+
T Consensus 282 t~L~~A~~~~~~~ 294 (351)
T 3utm_A 282 TALHRAALAGHLQ 294 (351)
T ss_dssp CHHHHHHHHTCHH
T ss_pred CHHHHHHHcCcHH
Confidence 8888877776654
No 101
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.52 E-value=1.4e-14 Score=123.90 Aligned_cols=82 Identities=18% Similarity=0.137 Sum_probs=76.8
Q ss_pred CCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCC-CchhHHH
Q 042220 13 QKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNG-NTPLHVL 91 (255)
Q Consensus 13 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G-~TpLh~A 91 (255)
+|+||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+..|+ .+++++|+ +.|++++.+|.+| +||||+|
T Consensus 61 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~~~g~--~~~v~~Ll-~~ga~~~~~~~~g~~t~L~~A 136 (285)
T 3kea_A 61 ENEFPLHQAATLEDTKIVKILLFSGLDD-SQFDDKGNTALYYAVDSGN--MQTVKLFV-KKNWRLMFYGKTGWKTSFYHA 136 (285)
T ss_dssp TTCCHHHHHTTSSSCHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC--HHHHHHHH-HHCGGGGGCSSSGGGSHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCcHHHHHHHcCC--HHHHHHHH-hcCCCCCccCCCCCCCHHHHH
Confidence 6899999999999999999999999998 7899999999999999999 99999999 6799999999999 8999999
Q ss_pred HHhhhhc
Q 042220 92 AAVLQKE 98 (255)
Q Consensus 92 ~~~~~~~ 98 (255)
+..++.+
T Consensus 137 ~~~~~~~ 143 (285)
T 3kea_A 137 VMLNDVS 143 (285)
T ss_dssp HHTTCHH
T ss_pred HHcCCHH
Confidence 9987655
No 102
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.51 E-value=9.1e-15 Score=129.73 Aligned_cols=86 Identities=22% Similarity=0.118 Sum_probs=79.8
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhh---hhhhccC
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVE---MLINKQD 81 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~---~~i~~~d 81 (255)
.++.+|. +|+||||+|+..|+.+++++|+++++++ +.+|.+|+||||+|+..|+ .+++++|+ +.+ .+++.+|
T Consensus 158 ~vn~~d~-~g~TpL~~A~~~g~~~iv~~Ll~~ga~~-~~~~~~g~t~L~~A~~~g~--~~~v~~Ll-~~~~~~~~~~~~d 232 (373)
T 2fo1_E 158 DVNAMDC-DENTPLMLAVLARRRRLVAYLMKAGADP-TIYNKSERSALHQAAANRD--FGMMVYML-NSTKLKGDIEELD 232 (373)
T ss_dssp CTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHTTC--HHHHHHHT-TSHHHHHTTSCCC
T ss_pred CCcCCCC-CCCCHHHHHHHcChHHHHHHHHHCCCCC-cccCCCCCCHHHHHHHCCC--HHHHHHHH-hcCccccChhhcC
Confidence 4577888 9999999999999999999999999998 7899999999999999999 99999999 555 7999999
Q ss_pred CCCCchhHHHHHhh
Q 042220 82 VNGNTPLHVLAAVL 95 (255)
Q Consensus 82 ~~G~TpLh~A~~~~ 95 (255)
.+|.||||+|+..+
T Consensus 233 ~~g~t~L~~A~~~~ 246 (373)
T 2fo1_E 233 RNGMTALMIVAHNE 246 (373)
T ss_dssp TTSCCHHHHHHHSC
T ss_pred CCCCCHHHHHHHhC
Confidence 99999999999875
No 103
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.51 E-value=3.2e-14 Score=116.85 Aligned_cols=86 Identities=19% Similarity=0.166 Sum_probs=71.2
Q ss_pred eecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccC-CCCCc
Q 042220 8 ISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQD-VNGNT 86 (255)
Q Consensus 8 ~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d-~~G~T 86 (255)
..|+ +|.||||.|++.|+.+++++|++.+.++ +.+|..|+||||+|+..|+ .+++++|+ +.+.+++..+ ..|+|
T Consensus 4 ~~d~-~~~~~l~~A~~~g~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~--~~~v~~Ll-~~~~~~~~~~~~~~~t 78 (240)
T 3eu9_A 4 HIDD-YSTWDIVKATQYGIYERCRELVEAGYDV-RQPDKENVTLLHWAAINNR--IDLVKYYI-SKGAIVDQLGGDLNST 78 (240)
T ss_dssp CCSC-GGGCCHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC--HHHHHHHH-HTTCCTTCCBTTTTBC
T ss_pred cccc-ccchHHHHHHHcCChHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHhCC--HHHHHHHH-HcCCcchhhcCCcCCC
Confidence 3466 7889999999999999999999988887 7788889999999999999 99999988 6677776544 45899
Q ss_pred hhHHHHHhhhhc
Q 042220 87 PLHVLAAVLQKE 98 (255)
Q Consensus 87 pLh~A~~~~~~~ 98 (255)
|||+|++.++.+
T Consensus 79 ~L~~A~~~~~~~ 90 (240)
T 3eu9_A 79 PLHWATRQGHLS 90 (240)
T ss_dssp HHHHHHHHTCHH
T ss_pred hhHHHHHcCCHH
Confidence 999999886654
No 104
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.49 E-value=1.6e-14 Score=106.39 Aligned_cols=79 Identities=18% Similarity=0.191 Sum_probs=71.7
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCC
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNG 84 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G 84 (255)
.++.+|. .|+||||+|+..|+.+++++|+++++++ +.+|.+|+||||+|+..++ .+++++|+ +.|+++|.+|..|
T Consensus 34 ~~~~~d~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~tpl~~A~~~~~--~~~~~~Ll-~~ga~~n~~~~~~ 108 (115)
T 2l6b_A 34 DVNARSK-DGNTPLHLAAKNGHAEIVKLLLAKGADV-NARSKDGNTPEHLAKKNGH--HEIVKLLD-AKGADVNARSWGS 108 (115)
T ss_dssp CSSCCCS-SSCCTTHHHHTTTCHHHHHHHTTTTCCT-TCCCTTCCCTTHHHHTTTC--HHHHHHHH-TTSSSHHHHSCCC
T ss_pred CCCCcCC-CCCCHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHCCC--HHHHHHHH-HcCCCCCcCCccc
Confidence 3567788 9999999999999999999999999998 8899999999999999999 99999999 7899999999999
Q ss_pred Cchh
Q 042220 85 NTPL 88 (255)
Q Consensus 85 ~TpL 88 (255)
.+|-
T Consensus 109 ~~~~ 112 (115)
T 2l6b_A 109 SHHH 112 (115)
T ss_dssp C---
T ss_pred cccc
Confidence 9983
No 105
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.48 E-value=3.7e-14 Score=122.62 Aligned_cols=82 Identities=18% Similarity=0.057 Sum_probs=68.1
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCC
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNG 84 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G 84 (255)
.++.+|. +|+||||+|+..|+.+++++|+++++++ +.+|.+|+||||+|+..++ .+++++|+ +.+.+ .|
T Consensus 218 dvn~~d~-~G~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~~~--~~iv~~Ll-~~ga~------~g 286 (301)
T 2b0o_E 218 HLDAKAA-DGNTALHYAALYNQPDCLKLLLKGRALV-GTVNEAGETALDIARKKHH--KECEELLE-QAQAG------TF 286 (301)
T ss_dssp CTTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCCC-SCCCTTSCCHHHHHHHHTC--HHHHHHHH-HHHHH------TT
T ss_pred CCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCC--HHHHHHHH-HhcCC------CC
Confidence 3577888 9999999999999999999999999998 8899999999999999999 99999998 66665 68
Q ss_pred CchhHHHHHhhhh
Q 042220 85 NTPLHVLAAVLQK 97 (255)
Q Consensus 85 ~TpLh~A~~~~~~ 97 (255)
.||||+|++.++.
T Consensus 287 ~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 287 AFPLHVDYSWVIS 299 (301)
T ss_dssp SSCCC--------
T ss_pred CChhHHHHhcCCc
Confidence 9999999998764
No 106
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.44 E-value=1.7e-13 Score=97.10 Aligned_cols=66 Identities=26% Similarity=0.307 Sum_probs=60.9
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHHhhhhhh
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEM 75 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~ 75 (255)
.++.+|+ +|+||||+|+..|+.+++++|+++++++ +.+|.+|+||||+|+..|+ .+++++|+ +.|+
T Consensus 27 ~~n~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~~~~--~~~~~~Ll-~~ga 92 (93)
T 1n0q_A 27 DVNAKDK-NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGH--LEVVKLLL-EAGA 92 (93)
T ss_dssp CTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC--HHHHHHHH-HTTC
T ss_pred CCcccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCC--HHHHHHHH-HcCC
Confidence 3577888 9999999999999999999999999998 8899999999999999999 99999998 5554
No 107
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.42 E-value=2.9e-13 Score=117.81 Aligned_cols=90 Identities=24% Similarity=0.243 Sum_probs=70.5
Q ss_pred ceeecCCCCCcHHHHHHHcChHHHHHHHHHh-CCCcccccccCCchHHHHHHHhCC--chHHHHHHHhhhhhhhhhccCC
Q 042220 6 ACISDNDQKMTALLLAAGRGHIRVVNEIIST-CPDCCKQVDERGWNLLHFAMASSN--LFQLHSRLRNRSVEMLINKQDV 82 (255)
Q Consensus 6 v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~-~~~~~~~~d~~G~t~Lh~A~~~g~--~~~~~~~~Ll~~~~~~i~~~d~ 82 (255)
....++ .|+||||+|+++|+.+++++|+++ +.++ +.+|..|+|++|.++..++ ...+++++|+ +.|+++|.+|.
T Consensus 161 ~~~~~~-~g~T~L~~A~~~g~~~~v~~LL~~~gad~-n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl-~~gad~n~~d~ 237 (337)
T 4g8k_A 161 QERLRK-GGATALMDAAEKGHVEVLKILLDEMGADV-NACDNMGRNALIHALLSSDDSDVEAITHLLL-DHGADVNVRGE 237 (337)
T ss_dssp ---CTT-CSCCHHHHHHHHTCHHHHHHHHHHSCCCT-TCCCTTSCCHHHHHHHHSCTTTHHHHHHHHH-HTTCCTTCCCG
T ss_pred cccccC-CCCcHHHHHHHCCCHHHHHHHHhccCCCc-CccCCCCCcHHHHHHHHcCcccHHHHHHHHH-HCCCCCCCcCC
Confidence 345667 899999999999999999999975 6676 7888889999988877654 1234667777 77888999998
Q ss_pred CCCchhHHHHHhhhhc
Q 042220 83 NGNTPLHVLAAVLQKE 98 (255)
Q Consensus 83 ~G~TpLh~A~~~~~~~ 98 (255)
+|+||||+|++.++.+
T Consensus 238 ~g~t~L~~a~~~~~~~ 253 (337)
T 4g8k_A 238 RGKTPLILAVEKKHLG 253 (337)
T ss_dssp GGCCHHHHHHHTTCHH
T ss_pred CCCCHHHHHHHhhhhH
Confidence 9999999998886654
No 108
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.40 E-value=6e-13 Score=115.76 Aligned_cols=82 Identities=20% Similarity=0.205 Sum_probs=66.0
Q ss_pred CCCcHHHHHHHcChHHHHHHHHHhCCCccccccc-CCchHHHHHHHhCCchHHHHHHHhhhhhhh---------------
Q 042220 13 QKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDE-RGWNLLHFAMASSNLFQLHSRLRNRSVEML--------------- 76 (255)
Q Consensus 13 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~-~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~--------------- 76 (255)
+|.||||.|+++|+.++++.|+++++++ +.+|. .|+||||+|+..|+ .+++++|+ +.|++
T Consensus 24 ~~~t~L~~Av~~g~~~~V~~LL~~Gadv-n~~~~~~g~TpLh~A~~~g~--~~iv~~Ll-~~ga~~~~~~~~~~~~~~~~ 99 (337)
T 4g8k_A 24 EDNHLLIKAVQNEDVDLVQQLLEGGANV-NFQEEEGGWTPLHNAVQMSR--EDIVELLL-RHGADPVLRKKNGATPFILA 99 (337)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHHHTTC--HHHHHHHH-HTTCCTTCCCTTCCCHHHHH
T ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCC-CccCCCCCcCHHHHHHHcCC--HHHHHHHH-HcCCchhhhccCCCchhHHH
Confidence 5789999999999999999999999998 65654 59999999999999 99999998 55554
Q ss_pred ------------------hhccCCCCCchhHHHHHhhhhc
Q 042220 77 ------------------INKQDVNGNTPLHVLAAVLQKE 98 (255)
Q Consensus 77 ------------------i~~~d~~G~TpLh~A~~~~~~~ 98 (255)
++.+|.+|.||||+|+..++.+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~ 139 (337)
T 4g8k_A 100 AIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVK 139 (337)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHH
T ss_pred HhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHH
Confidence 4455666777777777665443
No 109
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.39 E-value=2.4e-13 Score=120.77 Aligned_cols=82 Identities=18% Similarity=0.202 Sum_probs=75.4
Q ss_pred CCCcHHHHHHHc-ChHHHHHHHHHhCCCcccccc--cCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhccCCCCCchhH
Q 042220 13 QKMTALLLAAGR-GHIRVVNEIISTCPDCCKQVD--ERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINKQDVNGNTPLH 89 (255)
Q Consensus 13 ~G~tpLh~Aa~~-g~~~~v~~Ll~~~~~~~~~~d--~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~~d~~G~TpLh 89 (255)
.+.|+||.|+.. |+.++++.|+++++++ +.+| ..|+||||+|+..|+ .+++++|+ +.|+++|.+|.+|+||||
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~--~~iv~~LL-~~Gadvn~~d~~G~TpLh 273 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANS--LLACEFLL-QNGANVNQADSAGRGPLH 273 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTC--HHHHHHHH-HTTCCTTCCCTTSCCHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCC--HHHHHHHH-HcCCCCCCCCCCCCCHHH
Confidence 456899999999 9999999999999998 6777 889999999999999 99999999 789999999999999999
Q ss_pred HHHHhhhhc
Q 042220 90 VLAAVLQKE 98 (255)
Q Consensus 90 ~A~~~~~~~ 98 (255)
+|+..++.+
T Consensus 274 ~A~~~g~~~ 282 (368)
T 3jue_A 274 HATILGHTG 282 (368)
T ss_dssp HHHHHTCHH
T ss_pred HHHHcCcHH
Confidence 999986653
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.33 E-value=3.6e-12 Score=117.37 Aligned_cols=81 Identities=20% Similarity=0.127 Sum_probs=73.4
Q ss_pred CCcHHHHHHHcChHHHHHHHHHhCCCccccc------ccCCchHHHHHHH---hCCchHHHHHHHhhhhhhhhhccCCCC
Q 042220 14 KMTALLLAAGRGHIRVVNEIISTCPDCCKQV------DERGWNLLHFAMA---SSNLFQLHSRLRNRSVEMLINKQDVNG 84 (255)
Q Consensus 14 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~------d~~G~t~Lh~A~~---~g~~~~~~~~~Ll~~~~~~i~~~d~~G 84 (255)
..+.||.|+..|+.+.++.|++.++++ +.+ |..|+||||+|+. .|+ .+++++|+ +.|+++|.+|.+|
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~-n~~~~~~~~~~~g~t~Lh~A~~~a~~g~--~~~v~~Ll-~~ga~vn~~d~~g 207 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQAS--LPLVDFII-QNGGHLDAKAADG 207 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCS-SSCBCCSSSCCSCBCHHHHHHHTCCTTT--HHHHHHHH-HHSCCTTCCCSSS
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccc-cCCCCCcccccccchHHHHHHHhccccc--HHHHHHHH-HcCCCCCccCCCC
Confidence 346799999999999999999999997 555 8899999999976 888 99999999 7899999999999
Q ss_pred CchhHHHHHhhhhc
Q 042220 85 NTPLHVLAAVLQKE 98 (255)
Q Consensus 85 ~TpLh~A~~~~~~~ 98 (255)
+||||+|+..++.+
T Consensus 208 ~TpLh~A~~~g~~~ 221 (497)
T 3lvq_E 208 NTALHYAALYNQPD 221 (497)
T ss_dssp CCHHHHHTTTTCHH
T ss_pred CcHHHHHHHcCCHH
Confidence 99999999997654
No 111
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.32 E-value=7.7e-12 Score=106.77 Aligned_cols=80 Identities=19% Similarity=0.084 Sum_probs=72.1
Q ss_pred CcHHHHHHHcChHHHHHHHHHhCCCcc-----cccccCCchHHHHHHHh---CCchHHHHHHHhhhhhhhhhccCCCCCc
Q 042220 15 MTALLLAAGRGHIRVVNEIISTCPDCC-----KQVDERGWNLLHFAMAS---SNLFQLHSRLRNRSVEMLINKQDVNGNT 86 (255)
Q Consensus 15 ~tpLh~Aa~~g~~~~v~~Ll~~~~~~~-----~~~d~~G~t~Lh~A~~~---g~~~~~~~~~Ll~~~~~~i~~~d~~G~T 86 (255)
.++||.|++.|+.+.++.+++.+++.. +..|..|+||||+|+.. ++ .+++++|+ +.|+++|.+|.+|+|
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~--~~~v~~Ll-~~ga~in~~d~~g~T 207 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTS--LHIVDFLV-QNSGNLDKQTGKGST 207 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTT--HHHHHHHH-HHCSCTTCCCTTCCC
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccch--HHHHHHHH-HCCCCccccCCCCCC
Confidence 468999999999999999999999852 34588999999999999 88 99999999 789999999999999
Q ss_pred hhHHHHHhhhh
Q 042220 87 PLHVLAAVLQK 97 (255)
Q Consensus 87 pLh~A~~~~~~ 97 (255)
|||+|+..++.
T Consensus 208 pLh~A~~~g~~ 218 (278)
T 1dcq_A 208 ALHYCCLTDNA 218 (278)
T ss_dssp HHHHHHHTTCH
T ss_pred HHHHHHHcCCH
Confidence 99999998554
No 112
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.32 E-value=1.4e-13 Score=122.58 Aligned_cols=85 Identities=14% Similarity=0.122 Sum_probs=65.2
Q ss_pred ecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcc--cccccCCchHHHHHHHhCCchHHHHHHHhhhhhhhhhc--cCCCC
Q 042220 9 SDNDQKMTALLLAAGRGHIRVVNEIISTCPDCC--KQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEMLINK--QDVNG 84 (255)
Q Consensus 9 ~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~--~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~~i~~--~d~~G 84 (255)
.|. .|.||||+|+++|+.+++++|++++++.. +..+.+ +||||+|+.+|+ .+++++|+ +.|++++. +|.+|
T Consensus 124 ~~~-~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~--~eiv~~Ll-~~ga~~~~~~~d~~g 198 (376)
T 2aja_A 124 IQA-ENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGH--LHVLNRLC-ELAPTEATAMIQAEN 198 (376)
T ss_dssp -CH-HHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTC--HHHHHHHH-HSCGGGHHHHHHHHH
T ss_pred hcc-CCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCC--HHHHHHHH-HcCCccchhccCCCC
Confidence 344 57788888888888888888888887521 222233 888888888888 88888888 67888777 88888
Q ss_pred CchhHHHH-Hhhhhc
Q 042220 85 NTPLHVLA-AVLQKE 98 (255)
Q Consensus 85 ~TpLh~A~-~~~~~~ 98 (255)
.||||+|+ +.|+.+
T Consensus 199 ~TpL~~Aa~~~G~~e 213 (376)
T 2aja_A 199 YYAFRWAAVGRGHHN 213 (376)
T ss_dssp HHHHHHHHSTTCCHH
T ss_pred CCHHHHHHHHCCCHH
Confidence 88888888 887765
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.21 E-value=2.5e-11 Score=88.75 Aligned_cols=61 Identities=23% Similarity=0.322 Sum_probs=56.4
Q ss_pred cceeecCCCCCcHHHHHHHcChHHHHHHHHHhCCCcccccccCCchHHHHHHHhCCchHHHHHHH
Q 042220 5 AACISDNDQKMTALLLAAGRGHIRVVNEIISTCPDCCKQVDERGWNLLHFAMASSNLFQLHSRLR 69 (255)
Q Consensus 5 ~v~~~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~~~~~~L 69 (255)
.++.+|. .|+||||+|+..|+.+++++|+++++++ +.+|.+|+||||+|+..|+ .+++++|
T Consensus 49 ~i~~~d~-~g~tpLh~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~--~~~~~~L 109 (110)
T 2zgd_A 49 DVAAKDK-NGSTPLHLAARNGHLEVVKLLLEAGADV-XAQDKFGKTAFDISIDNGN--EDLAEIL 109 (110)
T ss_dssp CTTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTC--HHHHHHH
T ss_pred CCCccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccccCCCcHHHHHHHcCC--HHHHHHh
Confidence 3567888 9999999999999999999999999998 8899999999999999999 9998875
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.20 E-value=4.6e-12 Score=112.86 Aligned_cols=83 Identities=8% Similarity=0.055 Sum_probs=66.0
Q ss_pred ecCCCCCcHHHHHHHcChHHHHHHHHHhCCCc--ccccccCCchHHHHHHHhCCchHHHHHHHhhhhhh-----hhhccC
Q 042220 9 SDNDQKMTALLLAAGRGHIRVVNEIISTCPDC--CKQVDERGWNLLHFAMASSNLFQLHSRLRNRSVEM-----LINKQD 81 (255)
Q Consensus 9 ~d~~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~--~~~~d~~G~t~Lh~A~~~g~~~~~~~~~Ll~~~~~-----~i~~~d 81 (255)
++. +++||||+|++.|+.+++++|+++++.. .+..|.+|+||||+|+.+|+ .+++++|+ +.|+ +++.+|
T Consensus 88 ~g~-~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~--~eiv~~Ll-~~gad~~~~~i~~~~ 163 (376)
T 2aja_A 88 KGI-KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGH--LHVLNRLC-ELAPTEIMAMIQAEN 163 (376)
T ss_dssp HTC-CHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTC--HHHHHHHH-HSCTTTHHHHHSHHH
T ss_pred cCC-CcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCC--HHHHHHHH-hCCCCccccccCCCC
Confidence 445 6789999999999999999999988632 12456789999999999999 99999999 6674 344444
Q ss_pred CCCCchhHHHHHhhhhc
Q 042220 82 VNGNTPLHVLAAVLQKE 98 (255)
Q Consensus 82 ~~G~TpLh~A~~~~~~~ 98 (255)
.||||+|++.|+.+
T Consensus 164 ---~TpLh~Aa~~G~~e 177 (376)
T 2aja_A 164 ---YHAFRLAAENGHLH 177 (376)
T ss_dssp ---HHHHHHHHHTTCHH
T ss_pred ---CCHHHHHHHCCCHH
Confidence 89999999998876
No 115
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=29.79 E-value=76 Score=26.77 Aligned_cols=21 Identities=29% Similarity=0.472 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHhHHHH
Q 042220 196 YSLMASMLAMVVAFVTGTYAM 216 (255)
Q Consensus 196 ~~~~~s~~~m~~af~~~~~~~ 216 (255)
.+..+++..+..+|++|+|=+
T Consensus 281 ~LTiit~IflP~T~IaGiyGM 301 (339)
T 4ev6_A 281 ILTMVTTIFAVPMWITGIYGM 301 (339)
T ss_dssp HHHHHHHHSSHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhhccC
Confidence 456678999999999999964
No 116
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=27.01 E-value=45 Score=28.57 Aligned_cols=21 Identities=24% Similarity=0.515 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHhHHHH
Q 042220 196 YSLMASMLAMVVAFVTGTYAM 216 (255)
Q Consensus 196 ~~~~~s~~~m~~af~~~~~~~ 216 (255)
.+..++...+..+|++|+|=+
T Consensus 305 ~LTiit~IflP~T~IaGiyGM 325 (363)
T 2iub_A 305 VLTIIATIFMPLTFIAGIYGM 325 (363)
T ss_dssp HHHHHHHHHHHHHHHTTSCC-
T ss_pred HHHHHHHHHHHHHHHHhhhcc
Confidence 456679999999999999854
Done!