Query 042223
Match_columns 376
No_of_seqs 210 out of 1681
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 06:34:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042223.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042223hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vte_A Tetrahydrocannabinolic 100.0 1.6E-68 5.6E-73 537.0 35.5 368 1-368 118-515 (518)
2 3fw9_A Reticuline oxidase; BI- 100.0 8.4E-66 2.9E-70 516.0 33.1 365 1-367 110-495 (495)
3 3tsh_A Pollen allergen PHL P 4 100.0 2.7E-64 9.4E-69 508.7 28.7 363 1-368 119-498 (500)
4 3rja_A Carbohydrate oxidase; p 100.0 4.4E-60 1.5E-64 473.5 29.8 349 1-366 102-472 (473)
5 3pop_A GILR oxidase; FAD bindi 100.0 1.6E-58 5.6E-63 464.2 29.2 354 1-365 98-501 (501)
6 1zr6_A Glucooligosaccharide ox 100.0 3.2E-55 1.1E-59 442.0 30.9 352 1-371 106-484 (503)
7 2ipi_A Aclacinomycin oxidoredu 100.0 1.1E-54 3.8E-59 439.5 33.5 356 1-366 119-520 (521)
8 2y3s_A TAML; oxidoreductase; H 100.0 6.3E-55 2.2E-59 441.6 31.2 358 1-366 122-528 (530)
9 2wdx_A Putative hexose oxidase 100.0 1E-54 3.5E-59 439.7 29.7 356 1-365 121-523 (523)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 1.5E-52 5.3E-57 418.6 25.8 340 1-365 101-456 (459)
11 1w1o_A Cytokinin dehydrogenase 100.0 1.3E-30 4.5E-35 264.7 22.3 116 1-119 140-257 (534)
12 2exr_A Cytokinin dehydrogenase 99.9 1.1E-23 3.7E-28 213.0 27.1 115 2-119 133-250 (524)
13 3pm9_A Putative oxidoreductase 99.9 1.3E-24 4.5E-29 216.9 16.7 131 1-132 116-252 (476)
14 4bby_A Alkyldihydroxyacetoneph 99.9 6.6E-24 2.3E-28 220.0 15.1 118 1-119 274-396 (658)
15 1wvf_A 4-cresol dehydrogenase 99.9 3.7E-22 1.3E-26 201.9 24.9 133 1-135 123-268 (520)
16 4feh_A Oxidoreductase DPRE1; a 99.9 1.3E-21 4.5E-26 195.4 25.2 129 1-133 108-238 (481)
17 2uuu_A Alkyldihydroxyacetoneph 99.9 5.7E-23 2E-27 209.6 15.7 131 1-135 205-339 (584)
18 2vfr_A Xylitol oxidase, aldito 99.9 2.6E-21 8.9E-26 190.9 26.3 105 1-111 81-187 (422)
19 1e8g_A Vanillyl-alcohol oxidas 99.8 1.5E-19 5.2E-24 184.2 22.0 133 1-135 138-300 (560)
20 2yvs_A Glycolate oxidase subun 99.8 8.6E-21 3E-25 170.1 10.4 107 1-113 8-120 (219)
21 3js8_A Cholesterol oxidase; ch 99.7 7E-17 2.4E-21 161.7 8.7 103 2-110 101-220 (540)
22 1f0x_A DLDH, D-lactate dehydro 99.7 2.5E-17 8.7E-22 167.0 5.1 117 1-119 114-284 (571)
23 2i0k_A Oxidoreductase; MIX alp 99.6 2.7E-16 9.2E-21 160.0 10.3 106 1-111 106-225 (561)
24 3tx1_A UDP-N-acetylenolpyruvoy 99.4 1.4E-13 4.8E-18 130.2 7.7 99 2-109 116-217 (322)
25 3i99_A UDP-N-acetylenolpyruvoy 99.4 5.1E-13 1.7E-17 127.7 10.1 99 2-109 94-199 (357)
26 1uxy_A MURB, uridine diphospho 99.3 8.9E-12 3.1E-16 118.7 10.2 99 2-109 78-183 (340)
27 1hsk_A UDP-N-acetylenolpyruvoy 99.2 4.4E-12 1.5E-16 120.5 5.6 95 1-107 109-209 (326)
28 2gqt_A UDP-N-acetylenolpyruvyl 99.2 9.2E-12 3.1E-16 114.6 6.3 95 4-108 77-173 (268)
29 1f0x_A DLDH, D-lactate dehydro 92.4 0.24 8.2E-06 50.0 7.3 78 260-367 487-564 (571)
30 3js8_A Cholesterol oxidase; ch 77.8 3.6 0.00012 41.0 6.5 23 338-360 511-533 (540)
31 2i0k_A Oxidoreductase; MIX alp 64.1 2.9 9.9E-05 41.9 2.3 22 339-360 533-554 (561)
32 1ffv_C CUTM, flavoprotein of c 31.3 47 0.0016 29.8 4.6 93 2-107 69-177 (287)
33 2gvs_A Chemosensory protein CS 31.2 17 0.00059 27.8 1.3 15 344-358 83-97 (109)
34 1k19_A Chemosensory protein CS 28.5 20 0.00068 27.6 1.2 14 345-358 82-95 (112)
35 2dt7_A Splicing factor 3A subu 20.6 42 0.0014 20.4 1.4 14 338-351 13-26 (38)
No 1
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=1.6e-68 Score=536.95 Aligned_cols=368 Identities=51% Similarity=0.962 Sum_probs=305.5
Q ss_pred CeEEEcCCCcHHHHHHHHHHcCCceeccCCCCCcccccccccCCCCCccccccccccccEeEEEEEcCCCcEEecCCCCc
Q 042223 1 KIECGQSGATLGQLYYRIAERSKNLGFPAGVCPTVGVGGHFSGGGYGFMMGKFGLAADHVVDAHLIDAEGRLLDRKSMGE 80 (376)
Q Consensus 1 ~~~~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~lggG~g~~s~~~G~~~D~v~~~~vV~a~G~~~~~~~~~~ 80 (376)
++|+||+|+++++|+++|.++|+++.+++|.|++|||||+++|||+|+++++||+++|||+++|||++||++++.+.+|+
T Consensus 118 ~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~gGg~G~~s~~~G~~~D~V~~~evV~adG~iv~~~~~~~ 197 (518)
T 3vte_A 118 QTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFSGGGYGALMRNYGLAADNIIDAHLVNVDGKVLDRKSMGE 197 (518)
T ss_dssp TEEEEETTCBHHHHHHHHHHHCTTEECCCCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCH
T ss_pred CEEEEeCCccHHHHHHHHHHhCCCceecCCCCCCeeeeeeeCCCCCccccCCCCchhheEEEEEEEccCCeEEEeecccc
Confidence 47999999999999999999987788999999999999999999999999999999999999999999999997444689
Q ss_pred chhhhhhcCCCCCeeEEEEEEEEEeecCceEEEEEEEeccc-hhHHHHHHHHHHHHhhcCCCceEEEEEec---------
Q 042223 81 DLFWSIRGGGGASFGVVVAWKVRLVTVPSTVTLFTVIRNMK-QNATKIVNEWQYIANKLHEGLFIDVVLIR--------- 150 (376)
Q Consensus 81 dLfwalrG~Gg~~fGvVt~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 150 (376)
|||||+||||+|+|||||+++||++|.|+.++.|.+.+.++ +++.+++.+|+++.+.+|+++++.+.+..
T Consensus 198 DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~l~~~~~~~~~~~~p~~~~ 277 (518)
T 3vte_A 198 DLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIHGLVKLFNKWQNIAYKYDKDLVLMTHFITKNITDNHGK 277 (518)
T ss_dssp HHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHHHHHHHHHHHHHHGGGSCTTEEEEEEEEEESCC-----
T ss_pred chhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHHHHHHHHHHHHHHHHcCCHhHeEEEEEcccCCCCCCCc
Confidence 99999999877899999999999999998777777776654 45778999999999999999998877652
Q ss_pred CCCeeEEEEEEEEeCCccCchhhhhccCcccCCCcccceecchHHHHHhhcCCCCC-Cc-------------ccccc-cC
Q 042223 151 ANSTMVAAFSSLFLGGIDRLLPLMQESFPELGLKKEDCTEMNWIESAHSLAGFQKE-EP-------------LHLLL-DR 215 (376)
Q Consensus 151 ~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g-~~-------------~~~~~-~~ 215 (376)
....+.+.+.++|.|+.+++.+.+.+.|++++.....+.+++|++...+++.++.+ .+ ...++ .+
T Consensus 278 ~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~k 357 (518)
T 3vte_A 278 NKTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEFSWIDTTIFYSGVVNFNTANFKKEILLDRSAGKKTAFSIK 357 (518)
T ss_dssp --CEEEEEEEEEEESCHHHHHHHHHHHCGGGCCCGGGEEEECHHHHHHHTSSSCCC-----CGGGGGCTTCSCCBEEEEE
T ss_pred CCCceEEEEEEEEeCCHHHHhhhhhhhhhhcCCCccceeecchhhhhhhhhcCCccCCccchhhhhccCCcCcccceeee
Confidence 11235677888999999998888877777777666678899999987766543321 11 01111 11
Q ss_pred C----CCCCHHHHHHHHHHHHhccCCceEEEEEecCCCCCCCCCCCCCCcccCCceEEEEEEEEeCCCCchhHHHHHHHH
Q 042223 216 N----SSNSKGAFEGIYDMFAEEEGQSAFIALIPYGGKMNEISESEIPFPYRAGNIYKILYVVAWGEDGASQRYINWIRK 291 (376)
Q Consensus 216 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ta~~~R~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 291 (376)
+ ..+++++++.+++.+.+.+...+.+.+.++||+++++++++|||+||++..|.+++...|.+++.+++..+|+++
T Consensus 358 s~~~~~~l~~~~i~~l~~~~~~~~~~~~~v~~~~~GGa~~~v~~~~TAf~hR~~~~~~~~~~~~w~~~~~~~~~~~w~~~ 437 (518)
T 3vte_A 358 LDYVKKPIPETAMVKILEKLYEEDVGAGMYVLYPYGGIMEEISESAIPFPHRAGIMYELWYTASWEKQEDNEKHINWVRS 437 (518)
T ss_dssp EEEESSCCCHHHHHHHHHGGGGSCTTTEEEEEEECCGGGGTSCTTSSSCCCCTTCCEEEEEEEEECCTTTHHHHHHHHHH
T ss_pred chhcccCCCHHHHHHHHHHHHhCCCCCeEEEEeecCccccCCCCCCCcccccCcceEEEEEEEecCCcchhHHHHHHHHH
Confidence 1 135899999999988654333578899999999999999999999998448999999999888888899999999
Q ss_pred HHhccccCCCCCCCceeccCCCCCCC-CCCCCCCcccccchhhhhhhhhcHHHHHHhHhccCCCCCCCCCCCCCCCCC
Q 042223 292 LYGYMTPYVSKNPREAYLNYRDLDSG-TNNQGYTSYKKDSIWGKKYFKNNFDRLVHVKTTVDPHNFFRNEQSIPPLSS 368 (376)
Q Consensus 292 ~~~~l~~~~~~~~~g~Y~N~~d~~~~-~~~~~~~~~~~~~~~~~~y~g~n~~rL~~iK~kyDP~nvF~~~~~I~p~~~ 368 (376)
+++.|.||.+..+.|+|+||.|.+++ .+....++|+.+..|++.|||+||+||++||+||||+|+|+++|+|+|.++
T Consensus 438 ~~~~~~p~~~~~~~g~YvNy~D~dl~~~~~~~~~~~~~~~~w~~~Yyg~N~~RL~~vK~~yDP~n~F~~~QsI~p~~~ 515 (518)
T 3vte_A 438 VYNFTTPYVSQNPRLAYLNYRDLDLGKTNHASPNNYTQARIWGEKYFGKNFNRLVKVKTKVDPNNFFRNEQSIPPLPP 515 (518)
T ss_dssp HHHHTGGGSCCTTCCCCTTSCCGGGCCCCTTSCCCHHHHHHHHHHHSSTHHHHHHHHHHHHCTTCCSCCTTCCCCCCT
T ss_pred HHHHhccccCCCCccccccCCCccccccccccccchhhhhhHHHHHhHhHHHHHHHHHhhcCchhcccCCCCCCCCCC
Confidence 99999999765567999999997765 211123444555679999999999999999999999999999999999876
No 2
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=8.4e-66 Score=516.03 Aligned_cols=365 Identities=42% Similarity=0.788 Sum_probs=299.2
Q ss_pred CeEEEcCCCcHHHHHHHHHHcCCceeccCCCCCcccccccccCCCCCccccccccccccEeEEEEEcCCCcEEecCCCCc
Q 042223 1 KIECGQSGATLGQLYYRIAERSKNLGFPAGVCPTVGVGGHFSGGGYGFMMGKFGLAADHVVDAHLIDAEGRLLDRKSMGE 80 (376)
Q Consensus 1 ~~~~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~lggG~g~~s~~~G~~~D~v~~~~vV~a~G~~~~~~~~~~ 80 (376)
++|+||||+++.+|+++|.+++.++.+++|.|++|||||+++|||+|.++++||+++|+|+++|||++||++++++.+|+
T Consensus 110 ~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgigG~~~gGg~G~~~~~~G~~~D~v~~~~vV~adG~i~~~~~~~~ 189 (495)
T 3fw9_A 110 ETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGGFGMMSRKYGLAADNVVDAILIDANGAILDRQAMGE 189 (495)
T ss_dssp TEEEEETTCBHHHHHHHHHHHCSSEECCCCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCH
T ss_pred CEEEEcCCCCHHHHHHHHHHhcCCceeccCCCCCCeEeeeccCCCCcccccCCCchhheEEEEEEEcCCCCEEEcCCCCh
Confidence 47999999999999999999966688999999999999999999999999999999999999999999999998445689
Q ss_pred chhhhhhcCCCCCeeEEEEEEEEEeecCceEEEEEEEeccc-hhHHHHHHHHHHHHhhcCCCceEEEEEecCCCeeEEEE
Q 042223 81 DLFWSIRGGGGASFGVVVAWKVRLVTVPSTVTLFTVIRNMK-QNATKIVNEWQYIANKLHEGLFIDVVLIRANSTMVAAF 159 (376)
Q Consensus 81 dLfwalrG~Gg~~fGvVt~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (376)
|||||+||||+|+|||||+++||++|.|+.+..+.+.++++ +++.+++.+|+++++.+|+++++.+...+..+.+.+.+
T Consensus 190 DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 269 (495)
T 3fw9_A 190 DVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSLLHKWQFVAEELEEDFTLSVLGGADEKQVWLTM 269 (495)
T ss_dssp HHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHHHHHHHHHHHHHSCTTEEEEEEEEEETTEEEEEE
T ss_pred hhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHHHHHHHHHHHhcCChhHeEEEEEcCCCCceEEEE
Confidence 99999999668899999999999999998777777666553 45778999999999999999998776543334556778
Q ss_pred EEEEeCCccCchhhhhccCcccCCCcccceecchHHHHHhhcCCCC-------CC--cccccccCC----CCCCHHHHHH
Q 042223 160 SSLFLGGIDRLLPLMQESFPELGLKKEDCTEMNWIESAHSLAGFQK-------EE--PLHLLLDRN----SSNSKGAFEG 226 (376)
Q Consensus 160 ~~~~~g~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------g~--~~~~~~~~~----~~~~~~~~~~ 226 (376)
.++|.|+.+++.+.+.+.|+++++....+.+++|.+...+++..+. .. ....+..++ ..+++++++.
T Consensus 270 ~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ks~~~~~~l~~~~i~~ 349 (495)
T 3fw9_A 270 LGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGESFAYLAGLETVSQLNNRFLKFDERAFKTKVDLTKEPLPSKAFYG 349 (495)
T ss_dssp EEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHHTTCSCGGGGGCTTSCSCCCEEEEEEEECSSCCCHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHhhhhcCCCccceEEcCHHHHHHHHhcccchhhhcCCCCCccCcceeEeehhhcCCCCHHHHHH
Confidence 8899999998888877767777766677889999997766543221 00 001111111 1258999999
Q ss_pred HHHHHHhccCCceEEEEEecCCCCCCCCCCCCCCcccCCceEEEEEEEEeCCC--CchhHHHHHHHHHHhccccCCCCCC
Q 042223 227 IYDMFAEEEGQSAFIALIPYGGKMNEISESEIPFPYRAGNIYKILYVVAWGED--GASQRYINWIRKLYGYMTPYVSKNP 304 (376)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ta~~~R~~~~~~~~~~~~w~~~--~~~~~~~~~~~~~~~~l~~~~~~~~ 304 (376)
+++.+.+.+ .+.+.++++||++++++.++|||+||++.+|.+++...|.++ +.+++..+|++++++.+.||.+..+
T Consensus 350 l~~~~~~~~--~~~~~~~~~GGa~~~v~~~~TAf~hR~~~~~~~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~p~~~~~~ 427 (495)
T 3fw9_A 350 LLERLSKEP--NGFIALNGFGGQMSKISSDFTPFPHRSGTRLMVEYIVAWNQSEQKKKTEFLDWLEKVYEFMKPFVSKNP 427 (495)
T ss_dssp HHHHHHHCT--TEEEEEEECCGGGGTSCTTTSSCCCCTTCCEEEEEEEEECGGGGGGHHHHHHHHHHHHHHHGGGSCCSS
T ss_pred HHHHHhhCC--CcEEEecccCCccccCCCCCCCccccCccceEEEEEEecCCCCcchhHHHHHHHHHHHHHHhhhccCCC
Confidence 999887554 367889999999999999999999998558999999999864 5677889999999999999976556
Q ss_pred CceeccCCCCCCCCCCC-----CCCcccccchhhhhhhhhcHHHHHHhHhccCCCCCCCCCCCCCCCC
Q 042223 305 REAYLNYRDLDSGTNNQ-----GYTSYKKDSIWGKKYFKNNFDRLVHVKTTVDPHNFFRNEQSIPPLS 367 (376)
Q Consensus 305 ~g~Y~N~~d~~~~~~~~-----~~~~~~~~~~~~~~y~g~n~~rL~~iK~kyDP~nvF~~~~~I~p~~ 367 (376)
+++|+||.|.+++.++. +.++|+.+..|++.|||+||+||++||+||||+|+|+++|+|+|..
T Consensus 428 ~~~Y~Ny~d~dl~~~~~~~~~~~~~~~~~~~~w~~~Yyg~n~~RL~~vK~~yDP~n~F~~~qsI~p~~ 495 (495)
T 3fw9_A 428 RLGYVNHIDLDLGGIDWGNKTVVNNAIEISRSWGESYFLSNYERLIRAKTLIDPNNVFNHPQSIPPMA 495 (495)
T ss_dssp CCCCGGGCCGGGCCCCTTCHHHHHTHHHHHHHHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCCC
T ss_pred cccccCccCccccccccccccccccccchhhhhHHHHhHhHHHHHHHHHHhhCcHhhCCCCCCCCCCC
Confidence 78999999977542110 0123333457999999999999999999999999999999999863
No 3
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=2.7e-64 Score=508.66 Aligned_cols=363 Identities=45% Similarity=0.893 Sum_probs=287.9
Q ss_pred CeEEEcCCCcHHHHHHHHHHcCCceeccCCCCCcccccccccCCCCCccccccccccccEeEEEEEcCCCcEEecCCCCc
Q 042223 1 KIECGQSGATLGQLYYRIAERSKNLGFPAGVCPTVGVGGHFSGGGYGFMMGKFGLAADHVVDAHLIDAEGRLLDRKSMGE 80 (376)
Q Consensus 1 ~~~~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~lggG~g~~s~~~G~~~D~v~~~~vV~a~G~~~~~~~~~~ 80 (376)
++|+||+|++|+||+++|.++|..+.+++|+|++||+||+++|||+|+++++||+++|||+++|||||||+|+++.++|+
T Consensus 119 ~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vV~a~G~i~~~~~~~~ 198 (500)
T 3tsh_A 119 RTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNFAGGGFGMLLRKYGIAAENVIDVKLVDANGKLHDKKSMGD 198 (500)
T ss_dssp TEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTSCEECHHHHCH
T ss_pred CEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCccccccCCccccccCChhhheeeEEEECCCceEEECCCCCh
Confidence 48999999999999999999998888999999999999999999999999999999999999999999999998556789
Q ss_pred chhhhhhcCCCCCeeEEEEEEEEEeecCceEEEEEEEeccchhHHHHHHHHHHHHhhcCCCceEEEEEecCCCeeEEEEE
Q 042223 81 DLFWSIRGGGGASFGVVVAWKVRLVTVPSTVTLFTVIRNMKQNATKIVNEWQYIANKLHEGLFIDVVLIRANSTMVAAFS 160 (376)
Q Consensus 81 dLfwalrG~Gg~~fGvVt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (376)
|||||+||||||||||||++++|++|.|+.+..+...+...+.+.+++.+|+.+.+.+|+++...+.... +...+.
T Consensus 199 dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~ 274 (500)
T 3tsh_A 199 DHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSEGAVDIINKWQVVAPQLPADLMIRIIAQG----PKATFE 274 (500)
T ss_dssp HHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETTTTHHHHHHHHHHHGGGSCTTEEEEEEESS----SEEEEE
T ss_pred HHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcHHHHHHHHHHHHHhhhccChhhEEEEEecC----CCcEEE
Confidence 9999999988899999999999999999977777766665555778999999999999999877665432 234566
Q ss_pred EEEeCCccCchhhhhccCcccCCCcccceecchHHHHHhhcCCCCCC-------------cccccccC--CCCCCHHHHH
Q 042223 161 SLFLGGIDRLLPLMQESFPELGLKKEDCTEMNWIESAHSLAGFQKEE-------------PLHLLLDR--NSSNSKGAFE 225 (376)
Q Consensus 161 ~~~~g~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~-------------~~~~~~~~--~~~~~~~~~~ 225 (376)
.+|.|+.+++.+.+...++.++.....+..++|.+...+........ ....+... ...++.+.++
T Consensus 275 ~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (500)
T 3tsh_A 275 AMYLGTCKTLTPLMSSKFPELGMNPSHCNEMSWIQSIPFVHLGHRDALEDDLLNRQNSFKPFAEYKSDYVYQPFPKTVWE 354 (500)
T ss_dssp EEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHHHHCCSSCHHHHHHCCCCCCCCEEEEEEEEECSCCCHHHHH
T ss_pred EEEecchhhhhhhhhhcchhccCCccccchhhhhccchhhhhccccccccccccccccccchhhhhhhhhcccCcHHHHH
Confidence 78899988777666666666666556667777777544321110000 00000000 0123566677
Q ss_pred HHHHHHHhccCCceEEEEEecCCCCCCCCCCCCCCcccCCceEEEEEEEEeCCCCchhHHHHHHHHHHhccccCCCCCCC
Q 042223 226 GIYDMFAEEEGQSAFIALIPYGGKMNEISESEIPFPYRAGNIYKILYVVAWGEDGASQRYINWIRKLYGYMTPYVSKNPR 305 (376)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ta~~~R~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 305 (376)
.+++.+...+. ...+.++++||+++++++++++|+||++.++++++...|.+++++++..+|++++++.+.++....+.
T Consensus 355 ~~~~~~~~~~~-~~~~~~~~~Gga~~~~~~~ata~~~R~~~l~~i~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (500)
T 3tsh_A 355 QILNTWLVKPG-AGIMIFDPYGATISATPESATPFPHRKGVLFNIQYVNYWFAPGAAAAPLSWSKDIYNYMEPYVSKNPR 433 (500)
T ss_dssp HHHHTGGGSTT-CCEEEEEECCHHHHHSCTTSSSCCCCTTCCEEEEEEEEECSTTCCHHHHHHHHHHHHHHGGGSCCSSC
T ss_pred HHHHHhhcCCC-ceEEEEcccCccccCCCCccCcCcccCCcEEEEEEEEecCCcchhHHHHHHHHHHHHHHHHHhcCCCC
Confidence 77665543332 35667889999999999999999999977788889999999999999999999999999999776677
Q ss_pred ceeccCCCCCCCCCCC--CCCcccccchhhhhhhhhcHHHHHHhHhccCCCCCCCCCCCCCCCCC
Q 042223 306 EAYLNYRDLDSGTNNQ--GYTSYKKDSIWGKKYFKNNFDRLVHVKTTVDPHNFFRNEQSIPPLSS 368 (376)
Q Consensus 306 g~Y~N~~d~~~~~~~~--~~~~~~~~~~~~~~y~g~n~~rL~~iK~kyDP~nvF~~~~~I~p~~~ 368 (376)
++|+||+|.+++.++. ...+|...++|++.|||+||+||++||+||||+|+|+++|+|+|+..
T Consensus 434 ~aY~Ny~D~dlg~~~~~~~~~~~~~~~~w~~~Y~g~Ny~RL~~IK~kyDP~nvF~~~qsI~Pl~~ 498 (500)
T 3tsh_A 434 QAYANYRDIDLGRNEVVNDVSTYASGKVWGQKYFKGNFERLAITKGKVDPTDYFRNEQSIPPLIK 498 (500)
T ss_dssp CCCTTSCCGGGCCCCEETTEECHHHHHHHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTSCCCCCC
T ss_pred eEEeccccccccccccccccccccccchHHHHhhhHHHHHHHHHHHHhCcccccCCCCCCCCCCC
Confidence 8999999987653210 01112233589999999999999999999999999999999999853
No 4
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=4.4e-60 Score=473.48 Aligned_cols=349 Identities=26% Similarity=0.442 Sum_probs=274.5
Q ss_pred CeEEEcCCCcHHHHHHHHHHcCCceeccCCCCCcccccccccCCCCCccccccccccccEeEEEEEcCCCcEEe-cCCCC
Q 042223 1 KIECGQSGATLGQLYYRIAERSKNLGFPAGVCPTVGVGGHFSGGGYGFMMGKFGLAADHVVDAHLIDAEGRLLD-RKSMG 79 (376)
Q Consensus 1 ~~~~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~lggG~g~~s~~~G~~~D~v~~~~vV~a~G~~~~-~~~~~ 79 (376)
++|+||+|+++.+|+++|.++| .+.+++|.|++|||||+++|||+|+++++||+.+|+|+++|||++||++++ +.++|
T Consensus 102 ~~v~v~aG~~~~~l~~~l~~~G-~~~~p~G~~~~vgvgG~~~ggg~G~~~~~~G~~~D~v~~~~vV~a~G~v~~~~~~~~ 180 (473)
T 3rja_A 102 GIAHVEPGARLGHLATVLNDKY-GRAISHGTCPGVGISGHFAHGGFGFSSHMHGLAVDSVVGVTVVLADGRIVEASATEN 180 (473)
T ss_dssp TEEEECTTCBHHHHHHHHHHHH-SEECCCCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTSCEEEEETTBS
T ss_pred CEEEECCCCCHHHHHHHHHHcC-CEEeccCCCCCcEeeeeccCCCCCcccccccchHhheeeEEEEecCCeEEEeCCCCC
Confidence 4799999999999999999997 377899999999999999999999999999999999999999999999998 77789
Q ss_pred cchhhhhhcCCCCCeeEEEEEEEEEeecCceEEEEEEEeccc-h-hHHHHHHHHHHHHh-hcCCCceEEEEEecCCCeeE
Q 042223 80 EDLFWSIRGGGGASFGVVVAWKVRLVTVPSTVTLFTVIRNMK-Q-NATKIVNEWQYIAN-KLHEGLFIDVVLIRANSTMV 156 (376)
Q Consensus 80 ~dLfwalrG~Gg~~fGvVt~~~~~~~p~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 156 (376)
+|||||+||+ +|+|||||+++||++|.|+.+..+...+++. . ++.+++.+|+++.. ++|+++++.+.+.+. . .
T Consensus 181 ~dLf~a~rG~-~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~-~--~ 256 (473)
T 3rja_A 181 ADLFWGIKGA-GSNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTSALKGIEAVEDYARWVAPREVNFRIGDYGA-G--N 256 (473)
T ss_dssp HHHHHHHHHH-GGGTCEEEEEEEECEECCSCEEEEEEECCCCSHHHHHHHHHHHHHHHHHTCCTTEEEEEEESSS-S--C
T ss_pred cchhhcccCC-CCceEEEEEEEEEEEeCCCceEEEEEEecCccHHHHHHHHHHHHHHhhhCCChhHEEEEEEcCC-C--c
Confidence 9999999999 6899999999999999998777777777664 2 36789999999987 899999988776522 1 2
Q ss_pred EEEEEEEeCCccCchhhhhccCcccC-CCcccce-ecchHHHHHhhcCC----CCCCc-ccccccCC---CCCCHHHHHH
Q 042223 157 AAFSSLFLGGIDRLLPLMQESFPELG-LKKEDCT-EMNWIESAHSLAGF----QKEEP-LHLLLDRN---SSNSKGAFEG 226 (376)
Q Consensus 157 ~~~~~~~~g~~~~~~~~l~~~~~~l~-~~~~~~~-~~~~~~~~~~~~~~----~~g~~-~~~~~~~~---~~~~~~~~~~ 226 (376)
+.+.++|.|+.+++.+.+.+.+...+ +....+. +++|.+...+++.. +.+.. ...++.++ ..+++++++.
T Consensus 257 ~~~~~~~~G~~~~~~~~l~pl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ks~~~~~l~~~~~~~ 336 (473)
T 3rja_A 257 PGIEGLYYGTPEQWRAAFQPLLDTLPAGYVVNPTTSLNWIESVLSYSNFDHVDFITPQPVENFYAKSLTLKSIKGDAVKN 336 (473)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHTTSCTTCEECCCEEECHHHHHHHTSSSSCCCCSSCCCCBEEEEEEEEESCCTTHHHHH
T ss_pred EEEEEEecCCHHHHHHHHHHHHHhCCCCcceeeecccCHHHHHHhhhcCCCcccccCCCCCcceEeccccCCCCHHHHHH
Confidence 56678899999888776665332222 3445677 89999976654321 11100 01111111 2358889999
Q ss_pred HHHHHHhcc-C---CceEEEEEecCC---CCCCCCCCCCCCcccCCceEEEEEEEEeCC-CCchhHHHHHHHHHHhcccc
Q 042223 227 IYDMFAEEE-G---QSAFIALIPYGG---KMNEISESEIPFPYRAGNIYKILYVVAWGE-DGASQRYINWIRKLYGYMTP 298 (376)
Q Consensus 227 ~~~~~~~~~-~---~~~~~~~~~~gg---~~~~~~~~~ta~~~R~~~~~~~~~~~~w~~-~~~~~~~~~~~~~~~~~l~~ 298 (376)
+++.+.+.. . ..+.++++++|| +++++++++|||+||+ ..|.+++...|.+ ++.+++..+|++++++.+.+
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ai~~v~~~~TAf~hR~-~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 415 (473)
T 3rja_A 337 FVDYYFDVSNKVKDRFWFYQLDVHGGKNSQVTKVTNAETAYPHRD-KLWLIQFYDRYDNNQTYPETSFKFLDGWVNSVTK 415 (473)
T ss_dssp HHHHHHHTGGGCCSSEEEEEEEECCSTTCGGGGSCTTTSSCCCTT-CSEEEEEEEEECTTSCCCTTTHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCCCCcceEEEEEecCCcchhhcCCCCCCCccccCC-ccEEEEEEEEeCCCCccchHHHHHHHHHHHHHHh
Confidence 988875422 1 235678999998 6788888999999999 7888888889964 44555666777777666654
Q ss_pred CCCCCCCceeccCCCCCCCCCCCCCCcccccchhhhhhhhhcHHHHHHhHhccCCCCCCCCCCCCCCC
Q 042223 299 YVSKNPREAYLNYRDLDSGTNNQGYTSYKKDSIWGKKYFKNNFDRLVHVKTTVDPHNFFRNEQSIPPL 366 (376)
Q Consensus 299 ~~~~~~~g~Y~N~~d~~~~~~~~~~~~~~~~~~~~~~y~g~n~~rL~~iK~kyDP~nvF~~~~~I~p~ 366 (376)
.....+.++|+||+|.+++ ..+|++.|||+||+||++||+||||+|+|+++|+|+|.
T Consensus 416 ~~~~~~~g~YvNy~d~~~~-----------~~~~~~~yyg~n~~RL~~vK~kyDP~n~F~~~qsI~p~ 472 (473)
T 3rja_A 416 ALPKSDWGMYINYADPRMD-----------RDYATKVYYGENLARLQKLKAKFDPTDRFYYPQAVRPV 472 (473)
T ss_dssp TSCGGGEECCGGGCCCSSC-----------HHHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCC
T ss_pred hCCCCCCceEecCCCcccc-----------chhHHHHHHHHHHHHHHHHhhccCchhhCCCCcCCCCC
Confidence 4322235899999998743 13799999999999999999999999999999999986
No 5
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=1.6e-58 Score=464.20 Aligned_cols=354 Identities=22% Similarity=0.378 Sum_probs=264.5
Q ss_pred CeEEEcCCCcHHHHHHHHH-HcCCceeccCCCCCcccccccccCCCCCccccccccccccEeEEEEEc--CCCc--EEe-
Q 042223 1 KIECGQSGATLGQLYYRIA-ERSKNLGFPAGVCPTVGVGGHFSGGGYGFMMGKFGLAADHVVDAHLID--AEGR--LLD- 74 (376)
Q Consensus 1 ~~~~v~~G~~~~~v~~~l~-~~~~~~~~~~g~~~~vgvgG~~lggG~g~~s~~~G~~~D~v~~~~vV~--a~G~--~~~- 74 (376)
++|+||+|+++.||+++|. ++| +.+++|.|++|||||+++|||+|+++++||+++|||+++|||+ +||+ +++
T Consensus 98 ~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~~evV~~da~G~~~~v~~ 175 (501)
T 3pop_A 98 AGVRVGSGATVDQVQKALFRRWN--AALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVDHLHAVEVAVVDESRTVRLVTA 175 (501)
T ss_dssp SSEEEETTCBHHHHHHHHHHHHS--BCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEE
T ss_pred CEEEEECCcCHHHHHHHHHhhcC--eEeCCCCCCCceEeeccccCCCcccccccccHHHhEEEEEEEEecCCCCEEEEEe
Confidence 4799999999999999997 466 6788999999999999999999999999999999999999999 8999 454
Q ss_pred c---CCCCcchhhhhhcCCCCCeeEEEEEEEEE----------eecC-ceEEEEEEEeccch----hHHHHHHHHHHHHh
Q 042223 75 R---KSMGEDLFWSIRGGGGASFGVVVAWKVRL----------VTVP-STVTLFTVIRNMKQ----NATKIVNEWQYIAN 136 (376)
Q Consensus 75 ~---~~~~~dLfwalrG~Gg~~fGvVt~~~~~~----------~p~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 136 (376)
+ +.+|+|||||+||||+|+|||||+++||+ +|.+ ..++.+.+.|+... .+.+++..|+++..
T Consensus 176 ~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (501)
T 3pop_A 176 RADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFPWAMIDETSFVTVMRRFFEWHE 255 (501)
T ss_dssp ETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEEGGGCCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEchhhcCHHHHHHHHHHHHHHHh
Confidence 2 46789999999999779999999999999 6654 34555666665432 24578888888765
Q ss_pred --hcCCC----ceEEEEEecC-CCeeEEEEEEEEeCCccCchhhhhccCcc------cCCCcccceecchHHHHHhhcCC
Q 042223 137 --KLHEG----LFIDVVLIRA-NSTMVAAFSSLFLGGIDRLLPLMQESFPE------LGLKKEDCTEMNWIESAHSLAGF 203 (376)
Q Consensus 137 --~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~l~~~~~~------l~~~~~~~~~~~~~~~~~~~~~~ 203 (376)
..|++ +...+.+... .+ .+.+...|.|+.+++.+.+.+.+.. +.+... +.+++|.+...+.. .
T Consensus 256 ~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~l~~~~~~~~~~~g~~p~~~-~~~~~~~~~~~~~~-~ 331 (501)
T 3pop_A 256 RHSEPGSPESSLFATFFVNHVSSG--VLQLMVQQDADVDPEGEILARFVASLTEGTGVVGIPR-GGVMSWLTGTRYMS-Q 331 (501)
T ss_dssp HSCCTTCGGGGEEEEEEEECGGGC--EEEEEEEEETTTCTTCHHHHHHHHHHHTTSSCCCEEE-EEEEEHHHHHHHTC-B
T ss_pred hccCCCccccceEEEEEecCCCCC--eEEEEEEEeCChHHHHHHHHHHHHhhhhccCCCccce-eEEeCHHHHHhhhc-C
Confidence 34554 2333333321 22 2445567789887765555443221 233333 77889988765432 2
Q ss_pred CCCCcc--cccccCC----CCCCHHHHHHHHHHHHhc-cCCceEEEEEecCCCCCCCCCCCCCCcccCCceEEEEEEEEe
Q 042223 204 QKEEPL--HLLLDRN----SSNSKGAFEGIYDMFAEE-EGQSAFIALIPYGGKMNEISESEIPFPYRAGNIYKILYVVAW 276 (376)
Q Consensus 204 ~~g~~~--~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~gg~~~~~~~~~ta~~~R~~~~~~~~~~~~w 276 (376)
+.+.+. .++..++ ..+++++++.+++.+.+. +.+.+.+.++++||+++++++++|||+||+ ..|++++...|
T Consensus 332 ~~~~~~~~~~~~~ks~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~GGav~~v~~~~TAf~hR~-~~~~~~~~~~w 410 (501)
T 3pop_A 332 ADCGDVMGARSASKSAYHRAAPTDEQLSVLHRHLHADHPGQASYVMFNSYGGEINRRGPSDAAVPQRD-SVVKSSWFSAW 410 (501)
T ss_dssp CSCGGGTTCEEEEEEEEESSCCCHHHHHHHHHHHTSSSCCTTEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEE
T ss_pred CCCCcccccccceecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEEecCcccccCCCCCCCccCcC-ccEEEEEEEEe
Confidence 211110 1111111 135888999999888653 334578889999999999999999999999 78999999999
Q ss_pred CCCCchhHHHHHHHHHHhccccCCCC------CCCceeccCCCCCCCCCCCCCCcccccchhhhhhhhhcHHHHHHhHhc
Q 042223 277 GEDGASQRYINWIRKLYGYMTPYVSK------NPREAYLNYRDLDSGTNNQGYTSYKKDSIWGKKYFKNNFDRLVHVKTT 350 (376)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~g~Y~N~~d~~~~~~~~~~~~~~~~~~~~~~y~g~n~~rL~~iK~k 350 (376)
.+++.+++..+|++++++.+.++... .+.++|+||+|.+++..+ ..+ .+..|++.|||+||+||++||+|
T Consensus 411 ~~~~~~~~~~~w~~~~~~~~~~~~~g~p~~~~~~~gaYvNy~d~dl~~~~-~~~---~~~~w~~~Yyg~N~~RL~~vK~k 486 (501)
T 3pop_A 411 QDAELDELHLGWLRGLYEEFFAGTGGVPVTGGRTDGCYINYPDADLLDPA-RNR---SGEPWHHLYYKDNYARLRSAKRA 486 (501)
T ss_dssp SCGGGHHHHHHHHHHHHHHHTGGGTTSCCTTSSBCCCCTTSCCGGGGCTT-TCC---SSCCHHHHHHGGGHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCceeccCCCccccccc-ccc---ccchHHHHHhHhHHHHHHHHHHH
Confidence 98888888999999999988765321 246899999998754211 011 12349999999999999999999
Q ss_pred cCCCCCCCCCCCCCC
Q 042223 351 VDPHNFFRNEQSIPP 365 (376)
Q Consensus 351 yDP~nvF~~~~~I~p 365 (376)
|||+|+|+++|+|+|
T Consensus 487 yDP~n~F~~~qsI~p 501 (501)
T 3pop_A 487 WDPLNTFHHSMSIGL 501 (501)
T ss_dssp HCTTCCSCCTTCCCC
T ss_pred hCcccccCCCCCCCC
Confidence 999999999999987
No 6
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=3.2e-55 Score=441.98 Aligned_cols=352 Identities=21% Similarity=0.409 Sum_probs=261.6
Q ss_pred CeEEEcCCCcHHHHHHHHHHcCCceeccCCCCCcccccccccCCCCCccccccccccccEeEEEEEcCCCcEEe-cCCCC
Q 042223 1 KIECGQSGATLGQLYYRIAERSKNLGFPAGVCPTVGVGGHFSGGGYGFMMGKFGLAADHVVDAHLIDAEGRLLD-RKSMG 79 (376)
Q Consensus 1 ~~~~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~lggG~g~~s~~~G~~~D~v~~~~vV~a~G~~~~-~~~~~ 79 (376)
++|+||||+++.+|+++|.+++ ++.+|+|.|++||+||+++|||+|+++++||+++|+|+++|||++||++++ ++++|
T Consensus 106 ~~v~v~aG~~~~~l~~~l~~~~-gl~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~~vV~a~G~i~~~~~~~~ 184 (503)
T 1zr6_A 106 NVATIQGGARLGYTALELLDQG-NRALSHGTCPAVGVGGHVLGGGYGFATHTHGLTLDWLIGATVVLADASIVHVSETEN 184 (503)
T ss_dssp SCEEEETTCBHHHHHHHHHHTT-SEECCCCSCTTSBHHHHHHHCCCSTTHHHHCCGGGGEEEEEEECTTSCEEEEBTTBS
T ss_pred CeEEEecCCCHHHHHHHHHHcC-CEEeCCCCCCcCchhhhhcCCCCCcccccccChhheEEEEEEEecCCCEEEeCCCCC
Confidence 4799999999999999997775 478899999999999999999999999999999999999999999999998 77789
Q ss_pred cchhhhhhcCCCCCeeEEEEEEEEEeecCceEEEEEEEeccc-hhHHHHHHHHHHHHhh-cCCCceEEEEEecCCCeeEE
Q 042223 80 EDLFWSIRGGGGASFGVVVAWKVRLVTVPSTVTLFTVIRNMK-QNATKIVNEWQYIANK-LHEGLFIDVVLIRANSTMVA 157 (376)
Q Consensus 80 ~dLfwalrG~Gg~~fGvVt~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 157 (376)
+|||||+|||| |+|||||+++||++|.|+....+.+.+.+. +.+.+++.+|+++... .|++++..+.+... .+
T Consensus 185 ~dL~~a~rG~~-g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----~~ 259 (503)
T 1zr6_A 185 ADLFWALRGGG-GGFAIVSEFEFNTFEAPEIITTYQVTTTWNRKQHVAGLKALQDWAQNTMPRELSMRLEINAN----AL 259 (503)
T ss_dssp HHHHHHHTTCC-SSSCEEEEEEECCEECCSCEEEEEEEECCCHHHHHHHHHHHHHHHHHTCCTTBCCEEEEETT----EE
T ss_pred ccHHHHHhccC-CCcEEEEEEEEEEEecCceeEEEEEEEeCCHHHHHHHHHHHHHHHhhcCChhHEEEEEEeCC----eE
Confidence 99999999994 699999999999999988665566655543 3356888999998876 88888877666532 35
Q ss_pred EEEEEEeCCccCchhhhhccCcccCC--CcccceecchHHHHHhhc-C------CCCCCcccccccCC---CCCCHHHHH
Q 042223 158 AFSSLFLGGIDRLLPLMQESFPELGL--KKEDCTEMNWIESAHSLA-G------FQKEEPLHLLLDRN---SSNSKGAFE 225 (376)
Q Consensus 158 ~~~~~~~g~~~~~~~~l~~~~~~l~~--~~~~~~~~~~~~~~~~~~-~------~~~g~~~~~~~~~~---~~~~~~~~~ 225 (376)
.+..+|+|+.++..+.+.+.+..++. ..+.+..++|.+....+. . .+.+.. ..+..++ ..++++.++
T Consensus 260 ~~~~~~~g~~~~~~~~l~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~-~~~~~~s~~~~~l~~~~~~ 338 (503)
T 1zr6_A 260 NWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVETDWYGQINTYLYGADLNITYNYDVH-EYFYANSLTAPRLSDEAIQ 338 (503)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHHTTSCEEEEEEEEECHHHHHTTSCTTCCSSCSSCCCCC-BCEEEEEEEESSCCHHHHH
T ss_pred EEEEEEECCHHHHHHHHHHHHHhcCcCCCcCceeeCCHHHHHHHHcCCCcccccCCCCcc-ccceecccchhhCCHHHHH
Confidence 56678899987766655543322333 123455677876543221 1 111111 0011111 115778888
Q ss_pred HHHHHHH-hccC---CceEEEEEecCC---CCCCCCCCCCCCcccCCceEEEEEEEEe-----CCCCchhHHHHHHHHHH
Q 042223 226 GIYDMFA-EEEG---QSAFIALIPYGG---KMNEISESEIPFPYRAGNIYKILYVVAW-----GEDGASQRYINWIRKLY 293 (376)
Q Consensus 226 ~~~~~~~-~~~~---~~~~~~~~~~gg---~~~~~~~~~ta~~~R~~~~~~~~~~~~w-----~~~~~~~~~~~~~~~~~ 293 (376)
.+++.+. +.+. ..+.+.++++|| ++++++.++++|+||+ +.+++++...| .+++.++...+|++++.
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~av~~~~~~~ta~~~R~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (503)
T 1zr6_A 339 AFVDYKFDNSSVRPGRGWWIQWDFHGGKNSALAAVSNDETAYAHRD-QLWLWQFYDSIYDYENNTSPYPESGFEFMQGFV 417 (503)
T ss_dssp HHHHHHHHSCCCCTTEEEEEEEEECCSTTCSGGGSCTTTSSCCCTT-CSEEEEEEEEETTTTTCCTTTTTSCHHHHHHHH
T ss_pred HHHHHHHhhCCCCCCcceEEEEEEcCCchhhhcCCCcccCCccccc-ceeEEEEEeeeccccCCCccchHHHHHHHHHHH
Confidence 8888876 4322 124678899999 8888888899999998 67887776676 34444555567777766
Q ss_pred hccccCCCCCCCceeccCCCCCCCCCCCCCCcccccchhhhhhhhhcHHHHHHhHhccCCCCCCCCCCCCCCCCCCCC
Q 042223 294 GYMTPYVSKNPREAYLNYRDLDSGTNNQGYTSYKKDSIWGKKYFKNNFDRLVHVKTTVDPHNFFRNEQSIPPLSSRVP 371 (376)
Q Consensus 294 ~~l~~~~~~~~~g~Y~N~~d~~~~~~~~~~~~~~~~~~~~~~y~g~n~~rL~~iK~kyDP~nvF~~~~~I~p~~~~~~ 371 (376)
+.+.........|+|+||+|.+++ .++|++.|||+||+||++||+||||+|+|+++|+|+|..-.+.
T Consensus 418 ~~l~~~~~~~~~g~Y~Nyad~~~~-----------~~~~~~~~yG~n~~RL~~iK~kyDP~~vF~~~~~i~~~~w~~~ 484 (503)
T 1zr6_A 418 ATIEDTLPEDRKGKYFNYADTTLT-----------KEEAQKLYWRGNLEKLQAIKAKYDPEDVFGNVVSVEPIAYLEQ 484 (503)
T ss_dssp HHHHTTSCGGGCBCCGGGCCTTCC-----------HHHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCCCC---
T ss_pred HHHHhhCCCCCCceeccCCCcccc-----------cchHHHHHHHhHHHHHHHHHHHhCchhhcCCCCCCCchhhhhh
Confidence 655543211113799999997622 1379999999999999999999999999999999998865544
No 7
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=1.1e-54 Score=439.50 Aligned_cols=356 Identities=24% Similarity=0.424 Sum_probs=260.2
Q ss_pred CeEEEcCCCcHHHHHHHHH-HcCCceeccCCCCCcccccccccCCCCCccccccccccccEeEEEEEcCC--CcEE--e-
Q 042223 1 KIECGQSGATLGQLYYRIA-ERSKNLGFPAGVCPTVGVGGHFSGGGYGFMMGKFGLAADHVVDAHLIDAE--GRLL--D- 74 (376)
Q Consensus 1 ~~~~v~~G~~~~~v~~~l~-~~~~~~~~~~g~~~~vgvgG~~lggG~g~~s~~~G~~~D~v~~~~vV~a~--G~~~--~- 74 (376)
++|+||+|++|.||+++|. ++| +.+++|.|++|||||+++|||+|+++++||+++|||+++|||++| |+++ +
T Consensus 119 ~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV~~d~~G~i~~~~~ 196 (521)
T 2ipi_A 119 RAFAVEPGATLGETYRALYLDWG--VTIPAGVCPQVGVGGHVLGGGYGPLSRRDGVVADHLYAVEVVVVDASGRARKVVA 196 (521)
T ss_dssp TEEEECTTSBHHHHHHHHHHHHS--BCCCCCSCTTCBHHHHTTTTCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEE
T ss_pred CEEEEeCCcCHHHHHHHHHHhcC--ceeCCCCCCCcccCCcccCCCCCccccccccHhhcEEEEEEEEecCCccEEEEec
Confidence 4799999999999999997 677 678899999999999999999999999999999999999999977 9964 3
Q ss_pred cCC-CCcc--hhhhhhcCCCCCeeEEEEEEEEE-----------eecCc-eEEEEEEEeccc----hhHHHHHHHHHHHH
Q 042223 75 RKS-MGED--LFWSIRGGGGASFGVVVAWKVRL-----------VTVPS-TVTLFTVIRNMK----QNATKIVNEWQYIA 135 (376)
Q Consensus 75 ~~~-~~~d--LfwalrG~Gg~~fGvVt~~~~~~-----------~p~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~ 135 (376)
+.. +|+| ||||+||||+|||||||+++||+ +|.|+ .+..+.+.|+.+ +.+.+++++|+++.
T Consensus 197 ~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 276 (521)
T 2ipi_A 197 TSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLLPKAPTSTLRHIVTWDWSALTEEAFTRIIDNHGAWH 276 (521)
T ss_dssp ECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSSCBCCSCEEEEEEEEESTTCCHHHHHHHHHHHHHHH
T ss_pred ccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcccccCCCCceEEEEEEEecccccCHHHHHHHHHHHHHHH
Confidence 332 5665 99999998678999999999999 99875 344455555442 12458888888877
Q ss_pred hh--cCCC----ceEEEEEecCCCeeEEEEEEEEeCCccCchhhhhccC---cc-cC-CCcccceecchHHHHHhhcCCC
Q 042223 136 NK--LHEG----LFIDVVLIRANSTMVAAFSSLFLGGIDRLLPLMQESF---PE-LG-LKKEDCTEMNWIESAHSLAGFQ 204 (376)
Q Consensus 136 ~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~---~~-l~-~~~~~~~~~~~~~~~~~~~~~~ 204 (376)
.. .|++ +...+.+...... .+.+...|.|+.++..+.+.+.+ .. ++ +....+..++|.+........+
T Consensus 277 ~~~~~p~~~~~~l~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 355 (521)
T 2ipi_A 277 QSNSAAGTPYASMHSVFYLNSRAAG-QILLDIQIDGGLDGAEALLNDFVAAVNEGTGVEPAVQRSTEPWLRATLANKFDT 355 (521)
T ss_dssp HHSCSSSSGGGGCEEEEEEECTTSC-EEEEEEEEETTSTTHHHHHHHHHHHHTTTCSSCCEEEEEEECHHHHHTCCCCCC
T ss_pred HhccCCCccccceEEEEEeccCCCC-ceEEEEEeccCHHHHHHHHHHHHHHHHhhcCCCccceeeecCHHHHHHhhcCCC
Confidence 54 4554 3433334332111 23445568888776554443321 11 23 3334556678888654333222
Q ss_pred CCC-c---ccccccCCCCCCHHHHHHHHHHHHhccCCceEEEEEecCCCCCCCCCCCCCCcccCCceEEEEEEEEeCCCC
Q 042223 205 KEE-P---LHLLLDRNSSNSKGAFEGIYDMFAEEEGQSAFIALIPYGGKMNEISESEIPFPYRAGNIYKILYVVAWGEDG 280 (376)
Q Consensus 205 ~g~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ta~~~R~~~~~~~~~~~~w~~~~ 280 (376)
.+. . .+.++. ..++.+.++++++.+.+.+...+.+.++++||++++++.++++|+||+ +.+++++...|.+++
T Consensus 356 ~~~~~~~~~s~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~ 432 (521)
T 2ipi_A 356 GGFDRTKSKGAYLR--KPWTAAQAATLYRHLSADSQVWGEVSLYSYGGKVNSVPETATATAQRD-SIIKVWMSATWMDPA 432 (521)
T ss_dssp TTCCEEEEEEEEES--SCCCHHHHHHHHHHHHSCCSSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCGG
T ss_pred CCCccceeeccccc--cCCCHHHHHHHHHHHHhCCCCceEEEEEecCCcccCCCCccccccccc-hhhhcceeEecCCCC
Confidence 221 1 011111 134778888898888765444577889999999999988899999999 788889999999888
Q ss_pred chhHHHHHHHHHHhccccCCCC------CCCceeccCCCCCCCCCCCCCCcccccchhhhhhhhhcHHHHHHhHhccCCC
Q 042223 281 ASQRYINWIRKLYGYMTPYVSK------NPREAYLNYRDLDSGTNNQGYTSYKKDSIWGKKYFKNNFDRLVHVKTTVDPH 354 (376)
Q Consensus 281 ~~~~~~~~~~~~~~~l~~~~~~------~~~g~Y~N~~d~~~~~~~~~~~~~~~~~~~~~~y~g~n~~rL~~iK~kyDP~ 354 (376)
++++..+|++++++.+.+.... ...|+|+||+|.+++. +....+ ...|++.|||+||+||++||+||||+
T Consensus 433 ~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~-~~~~~~---~~~~~~~y~g~n~~RL~~iK~kyDP~ 508 (521)
T 2ipi_A 433 HDDANLAWIREIYREIFATTGGVPVPDDRTEGTFINYPDVDLVD-ERWNTS---GVPWYTLYYKGNYPRLQKVKARWDPR 508 (521)
T ss_dssp GHHHHHHHHHHHHHHHTTTTTSSCCSSSSBCCCCTTSCCGGGGC-TTTSCC---SCCHHHHHHGGGHHHHHHHHHHHCTT
T ss_pred chHHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCCCccccc-cccccc---hhhHHHhhhhhHHHHHHHHHHHhCCc
Confidence 8888999999999888733211 1257999999987431 000111 11499999999999999999999999
Q ss_pred CCCCCCCCCCCC
Q 042223 355 NFFRNEQSIPPL 366 (376)
Q Consensus 355 nvF~~~~~I~p~ 366 (376)
|+|+++|+|+|.
T Consensus 509 ~vF~~~qsI~p~ 520 (521)
T 2ipi_A 509 DVFRHALSVRPP 520 (521)
T ss_dssp CCSCCTTCCCCC
T ss_pred CEecCCCCCCCC
Confidence 999999999985
No 8
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=6.3e-55 Score=441.57 Aligned_cols=358 Identities=26% Similarity=0.446 Sum_probs=258.0
Q ss_pred CeEEEcCCCcHHHHHHHHHH-cCCceeccCCCCCcccccccccCCCCCccccccccccccEeEEEEEc--CCCcEE--e-
Q 042223 1 KIECGQSGATLGQLYYRIAE-RSKNLGFPAGVCPTVGVGGHFSGGGYGFMMGKFGLAADHVVDAHLID--AEGRLL--D- 74 (376)
Q Consensus 1 ~~~~v~~G~~~~~v~~~l~~-~~~~~~~~~g~~~~vgvgG~~lggG~g~~s~~~G~~~D~v~~~~vV~--a~G~~~--~- 74 (376)
++|+||+|++|.||+++|.+ +| +.+++|.|++||+||+++|||+|+++++||+++|+|+++|||+ +||+++ +
T Consensus 122 ~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV~~d~~G~i~~v~~ 199 (530)
T 2y3s_A 122 GAFAVEAGATLGAVYKTLFRVWG--VTLPGGACPDVGAGGHILGGGYGPLSRMHGSIVDYLHAVEVVVVDASGDARTVIA 199 (530)
T ss_dssp TEEEEETTCBHHHHHHHHHHHHS--CCCCCCSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHhhcC--eEEeCCCCCCCCcCCCcCCCCCCcccccccchhhheeeEEEEEecCCCcEEEEec
Confidence 47999999999999999985 77 5688899999999999999999999999999999999999999 559974 3
Q ss_pred cCC-CCcc--hhhhhhcCCCCCeeEEEEEEEEE------------eecCc-eEEEEEEEeccc----hhHHHHHHHHHHH
Q 042223 75 RKS-MGED--LFWSIRGGGGASFGVVVAWKVRL------------VTVPS-TVTLFTVIRNMK----QNATKIVNEWQYI 134 (376)
Q Consensus 75 ~~~-~~~d--LfwalrG~Gg~~fGvVt~~~~~~------------~p~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~ 134 (376)
+.+ +|+| ||||+||||+|||||||+++||+ +|.|+ .+..+.+.|+.. ..+.+++..|+++
T Consensus 200 ~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 279 (530)
T 2y3s_A 200 TREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVWPWEGLDEAAFARLVRNHGRW 279 (530)
T ss_dssp ESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEEESTTCCHHHHHHHHHHHHHH
T ss_pred cccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEecccccCHHHHHHHHHHHHHH
Confidence 443 5665 99999998778999999999999 99875 444555555442 2245788888887
Q ss_pred Hhh--cCCC----ceEEEEEecCCCeeEEEEEEEEeCCccCchhhhhcc---Ccc-cC-CCcccceecchHHHHHhhcCC
Q 042223 135 ANK--LHEG----LFIDVVLIRANSTMVAAFSSLFLGGIDRLLPLMQES---FPE-LG-LKKEDCTEMNWIESAHSLAGF 203 (376)
Q Consensus 135 ~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~---~~~-l~-~~~~~~~~~~~~~~~~~~~~~ 203 (376)
... .|++ +...+.+.... ...+.+...|.|+.++..+.+.+. +.. ++ +....+..++|.+........
T Consensus 280 ~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~l~p~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 358 (530)
T 2y3s_A 280 FEQNSGPDSPWCDLYSVLALTRSQ-SGALAMTTQLDATGPDAEKRLETYLAAVSEGVGVQPHSDTRRLPWLHSTRWPGIA 358 (530)
T ss_dssp HHHSCSTTCGGGGEEEEEEEECGG-GSEEEEEEEEECCSTTHHHHHHHHHHHHHTTCSSCCEEEEEEEEHHHHTTCHHHH
T ss_pred hhhcCCCCcccceeEEEEEeccCC-CCcEEEEEEEeCCHHHHHHHHHHHHHHHHhhcCCCccceeeeccHHHHHHhhcCC
Confidence 654 4544 33333333211 112444556888877655444432 211 23 233455677887754332211
Q ss_pred CCCCcccccccCC----CCCCHHHHHHHHHHHHhcc--CCceEEEEEecCCCCCCCCCCCCCCcccCCceEEEEEEEEeC
Q 042223 204 QKEEPLHLLLDRN----SSNSKGAFEGIYDMFAEEE--GQSAFIALIPYGGKMNEISESEIPFPYRAGNIYKILYVVAWG 277 (376)
Q Consensus 204 ~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gg~~~~~~~~~ta~~~R~~~~~~~~~~~~w~ 277 (376)
+.+....++..++ ..++++.++.+++.+.+.+ ...+.+.++++||++++++.++++|+||+ +.+++++...|.
T Consensus 359 ~~~~~~~r~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~GGav~~~~~~~ta~~~R~-~~~~~~~~~~w~ 437 (530)
T 2y3s_A 359 GDGDMTGRAKIKAAYARRSFDDRQIGTLYTRLTSTDYDNPAGVVALIAYGGKVNAVPADRTAVAQRD-SILKIVYVTTWE 437 (530)
T ss_dssp CCCCCCSEEEEEEEEESSCCCHHHHHHHHHHHHCSSSCCTTCEEEEEECCGGGGGSCTTSSSCCCCS-CSEEEEEEEEEC
T ss_pred CCCcccccceeeccccccCCCHHHHHHHHHHHHhcCCCCCceEEEEEecCCccccCCCCcCcccccc-cceeEEEEEecC
Confidence 2221001111111 1347788888888886532 23467888999999999998999999999 788899999999
Q ss_pred CCCchhHHHHHHHHHHhccccCCCC------CCCceeccCCCCCCCCCCCCCCcccccchhhhhhhhhcHHHHHHhHhcc
Q 042223 278 EDGASQRYINWIRKLYGYMTPYVSK------NPREAYLNYRDLDSGTNNQGYTSYKKDSIWGKKYFKNNFDRLVHVKTTV 351 (376)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~l~~~~~~------~~~g~Y~N~~d~~~~~~~~~~~~~~~~~~~~~~y~g~n~~rL~~iK~ky 351 (376)
++++++...+|++++++.+.+.... ...|+|+||+|.+++..+ ..+|+ ..|++.|||+||+||++||+||
T Consensus 438 ~~~~~~~~~~w~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~~~-~~~s~---~~~~~~yyg~n~~RL~~iK~ky 513 (530)
T 2y3s_A 438 DPAQDPVHVRWIRELYRDVYADTGGVPVPGGAADGAYVNYPDVDLADEE-WNTSG---VPWSELYYKDAYPRLQAVKARW 513 (530)
T ss_dssp CTTCHHHHHHHHHHHHHHHTGGGTTSCCTTTTBCCCCTTSCCGGGGCTT-TCCSS---CCHHHHHHGGGHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCcCccccccc-cccch---hHHHHHHHHHHHHHHHHHHHHh
Confidence 8888888999999999888732211 125799999998743100 01111 1499999999999999999999
Q ss_pred CCCCCCCCCCCCCCC
Q 042223 352 DPHNFFRNEQSIPPL 366 (376)
Q Consensus 352 DP~nvF~~~~~I~p~ 366 (376)
||+|+|+++|+|+|.
T Consensus 514 DP~nvF~~~q~I~p~ 528 (530)
T 2y3s_A 514 DPRNVFRHALSVRVP 528 (530)
T ss_dssp CTTCCSCCTTCCCCC
T ss_pred CchhhcCCCCCCCCC
Confidence 999999999999986
No 9
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=1e-54 Score=439.66 Aligned_cols=356 Identities=25% Similarity=0.433 Sum_probs=255.8
Q ss_pred CeEEEcCCCcHHHHHHHHHH-cCCceeccCCCCCcccccccccCCCCCccccccccccccEeEEEEEcCC--CcEE--e-
Q 042223 1 KIECGQSGATLGQLYYRIAE-RSKNLGFPAGVCPTVGVGGHFSGGGYGFMMGKFGLAADHVVDAHLIDAE--GRLL--D- 74 (376)
Q Consensus 1 ~~~~v~~G~~~~~v~~~l~~-~~~~~~~~~g~~~~vgvgG~~lggG~g~~s~~~G~~~D~v~~~~vV~a~--G~~~--~- 74 (376)
++|+||+|++|.||+++|.+ +| +.+++|+|++|||||+++|||+|+++++||+++|||+++|||++| |+++ +
T Consensus 121 ~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV~~d~~G~v~~~~~ 198 (523)
T 2wdx_A 121 NAFLIEPGNTLSEVYEKLYLGWN--VTIPGGVCGGVGVGGHICGGGYGPLSRQFGSVVDYLYAVEVVVVNKQGKARVIVA 198 (523)
T ss_dssp TEEEECTTCBHHHHHHHHHHHHS--CCCCCCCCTTCBHHHHHHHTCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEE
T ss_pred CEEEEcCCCCHHHHHHHHHHhcC--eEEccCCCCCCeeCccccCCCCCcccccccChhheEEEEEEEEecCCccEEEEec
Confidence 47999999999999999984 77 568889999999999999999999999999999999999999955 9974 2
Q ss_pred cCC-CCcc--hhhhhhcCCCCCeeEEEEEEEEE-----------eecCc-eEEEEEEEeccc----hhHHHHHHHHHHHH
Q 042223 75 RKS-MGED--LFWSIRGGGGASFGVVVAWKVRL-----------VTVPS-TVTLFTVIRNMK----QNATKIVNEWQYIA 135 (376)
Q Consensus 75 ~~~-~~~d--LfwalrG~Gg~~fGvVt~~~~~~-----------~p~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~ 135 (376)
+.. +|+| ||||+||||+|||||||+++||+ +|.|+ .+..+.+.|+.. +.+.+++++|+++.
T Consensus 199 ~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 278 (523)
T 2wdx_A 199 TRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPPATLLTSTVTFDWAGMTEAAFSRLLRNHGEWY 278 (523)
T ss_dssp ESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCCSEEEEEEEECCGGGCCHHHHHHHHHHHHHHH
T ss_pred ccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCCcccEEEEEEEecccccCHHHHHHHHHHHHHHH
Confidence 433 5666 99999998679999999999999 99876 355566666542 22457888888877
Q ss_pred hh--cCCC----ceEEEEEec-CCC--eeEEEEEEEEeCCccCchhhhhccC---cc-cC-CCcccceecchHHHHHhhc
Q 042223 136 NK--LHEG----LFIDVVLIR-ANS--TMVAAFSSLFLGGIDRLLPLMQESF---PE-LG-LKKEDCTEMNWIESAHSLA 201 (376)
Q Consensus 136 ~~--~~~~----~~~~~~~~~-~~~--~~~~~~~~~~~g~~~~~~~~l~~~~---~~-l~-~~~~~~~~~~~~~~~~~~~ 201 (376)
.. .|++ +...+.+.. ..+ .+.+.+..+|.|+.++..+.+.+.+ .+ ++ +....+..++|.+......
T Consensus 279 ~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (523)
T 2wdx_A 279 ERNSGPDSPYTGLWSQLMIGNEVPGMGESGFMMPIQVDATRPDARRLLDAHIEAVIDGVPPAEVPEPIEQRWLASTPGRG 358 (523)
T ss_dssp HHSCSTTCGGGGEEEEEEEECCCTTCTTCSEEEEEEEETTSTTHHHHHHHHHHHHHTTCTTCBCCCCEEEETTSSCCCCC
T ss_pred hhcCCCCccccceEEEEEeccCCCCCcceeEEEEEEEeCCHHHHHHHHHHHHHHHHhhcCCCccccceeccHHHHHHhhc
Confidence 54 4555 333333332 111 2345556678888876555444322 11 23 3334445567665322111
Q ss_pred CC-CCCCcccccccCCCCCCHHHHHHHHHHHHhcc-CCceEEEEEecCCCCCCCCCCCCCCcccCCceEEEEEEEEeCCC
Q 042223 202 GF-QKEEPLHLLLDRNSSNSKGAFEGIYDMFAEEE-GQSAFIALIPYGGKMNEISESEIPFPYRAGNIYKILYVVAWGED 279 (376)
Q Consensus 202 ~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gg~~~~~~~~~ta~~~R~~~~~~~~~~~~w~~~ 279 (376)
.. +.....+.+.. ..++.+.++.+++.+.+.. ...+.+.++.+||++++++.++++|+||+ ..+++++...|.++
T Consensus 359 ~~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~ 435 (523)
T 2wdx_A 359 GRGPASKTKAGYLR--KRLTDRQIQAVYENMTHMDGIDYGAVWLIGYGGKVNTVDPAATALPQRD-AILKVNYITGWANP 435 (523)
T ss_dssp SSCCEEEEEEEEES--SCCCHHHHHHHHHHHTCCTTCSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESSG
T ss_pred CCCCceeeeccccc--CCCCHHHHHHHHHHHHhcCCCCceEEEEEecCCccccCCCccccccccC-ceEEEEEEEEcCCC
Confidence 10 00000011111 1247788888888876432 23467788899999999998999999999 78889999999988
Q ss_pred CchhHHHHHHHHHHhccccCCCC------CCCceeccCCCCCCCCCCCCCCcccccchhhhhhhhhcHHHHHHhHhccCC
Q 042223 280 GASQRYINWIRKLYGYMTPYVSK------NPREAYLNYRDLDSGTNNQGYTSYKKDSIWGKKYFKNNFDRLVHVKTTVDP 353 (376)
Q Consensus 280 ~~~~~~~~~~~~~~~~l~~~~~~------~~~g~Y~N~~d~~~~~~~~~~~~~~~~~~~~~~y~g~n~~rL~~iK~kyDP 353 (376)
++++...+|++++++.+.+.... ...|+|+||+|.+++. +...+|+. .|++.|||+||+||++||+||||
T Consensus 436 ~~~~~~~~~~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~-~~~~~s~~---~~~~~yyg~n~~RL~~iK~kyDP 511 (523)
T 2wdx_A 436 GNEAKHLTWVRKLYADVYAETGGVPVPNDVSDGAYINYPDSDLAD-PGLNTSGV---PWHDLYYKGNHPRLRKVKAAYDP 511 (523)
T ss_dssp GGHHHHHHHHHHHHHHHTGGGTTSCCSCSSBCCCCTTSCCGGGGC-TTTCCSSC---CHHHHHHGGGHHHHHHHHHHHCT
T ss_pred ccHHHHHHHHHHHHHHHHhhhcCCCccCCCCCcceecCCcccccc-cccccchh---HHHHHHHHHHHHHHHHHHHHhCc
Confidence 88888999999998888732111 1257999999987431 00011111 38999999999999999999999
Q ss_pred CCCCCCCCCCCC
Q 042223 354 HNFFRNEQSIPP 365 (376)
Q Consensus 354 ~nvF~~~~~I~p 365 (376)
+|+|+++|+|+|
T Consensus 512 ~~vF~~~qsI~p 523 (523)
T 2wdx_A 512 RNHFHHALSIRP 523 (523)
T ss_dssp TCCSCCTTCCCC
T ss_pred HhhcCCCCCCCC
Confidence 999999999987
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=1.5e-52 Score=418.64 Aligned_cols=340 Identities=23% Similarity=0.328 Sum_probs=251.2
Q ss_pred CeEEEcCCCcHHHHHHHHHHcCCceeccCCCCCcccccccccCCCCCccccccccccccEeEEEEEcCCCcEEe-cCCCC
Q 042223 1 KIECGQSGATLGQLYYRIAERSKNLGFPAGVCPTVGVGGHFSGGGYGFMMGKFGLAADHVVDAHLIDAEGRLLD-RKSMG 79 (376)
Q Consensus 1 ~~~~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~lggG~g~~s~~~G~~~D~v~~~~vV~a~G~~~~-~~~~~ 79 (376)
++|+||||++|.||+++|.++| +.+++|.|++|||+|+++|||+|+++++||+.+|+|+++|||++||++++ +..+|
T Consensus 101 ~~v~v~aG~~~~~l~~~l~~~G--l~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~~~vV~~~G~i~~~~~~~~ 178 (459)
T 2bvf_A 101 SRARIGGGVISGDLVKEAAKFG--LAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNILGATLVTATGDVIYCSDDER 178 (459)
T ss_dssp TEEEEETTCBHHHHHHHHHTTT--EEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEEEEEECTTSCEEEEESSSS
T ss_pred CEEEECCCCCHHHHHHHHHHcC--CEecCCCCCCcccceeecCCCCccccccccCHhHhEEEEEEEcCCCeEEEeCCCCC
Confidence 4799999999999999999987 77888999999999999999999999999999999999999999999998 77789
Q ss_pred cchhhhhhcCCCCCeeEEEEEEEEEeecCceEEEEEEEeccchhHH--HHHHHHHHHHhhcCCCceEEEEEe-cCCCeeE
Q 042223 80 EDLFWSIRGGGGASFGVVVAWKVRLVTVPSTVTLFTVIRNMKQNAT--KIVNEWQYIANKLHEGLFIDVVLI-RANSTMV 156 (376)
Q Consensus 80 ~dLfwalrG~Gg~~fGvVt~~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 156 (376)
+|||||+||| +|+|||||+++||++|.|+.+....+.++.. ... +++.+|+++....|+.+...+... ...+...
T Consensus 179 ~dLf~a~rg~-~g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (459)
T 2bvf_A 179 PELFWAVRGA-GPNFGVVTEVEVQLYELPRKMLAGFITWAPS-VSELAGLLTSLLDALNEMADHIYPSVFVGVDENRAPS 256 (459)
T ss_dssp HHHHHHHHHH-GGGTCEEEEEEEEEEECCCCEEEEEEEECCC-HHHHHHHHHHHHHHHHHTTTTCCCEEEEEECTTCCEE
T ss_pred hhhHhHhhcc-CCccEEEEEEEEEEEECCCcEEEEEEEechH-HhhHHHHHHHHHHHHHhCcHhhccccccCcccCCCce
Confidence 9999999998 6899999999999999966555555556543 245 788889998877777764333221 1223344
Q ss_pred EEEEEEEeCCccCchhhhhccCcccC-CCcccceecchHHHHHhhc---CCCCCCccccccc-CCCCCC----HHHHHHH
Q 042223 157 AAFSSLFLGGIDRLLPLMQESFPELG-LKKEDCTEMNWIESAHSLA---GFQKEEPLHLLLD-RNSSNS----KGAFEGI 227 (376)
Q Consensus 157 ~~~~~~~~g~~~~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~~~~~---~~~~g~~~~~~~~-~~~~~~----~~~~~~~ 227 (376)
+.+...|.|+.++..+.+.+ |.+++ +....+..++|.+...... .++.+.. .+.. ++..++ .+.++++
T Consensus 257 ~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~~~~~~~~~~~~~~l 333 (459)
T 2bvf_A 257 VTVCVGHLGGLDIAERDIAR-LRGLGRTVSDSIAVRSYDEVVALNAEVGSFEDGMS--NLWIDREIAMPNARFAEAIAGN 333 (459)
T ss_dssp EEEEEECCSCHHHHHHHHHH-HHTTSCCSEECCEEECHHHHHHHHHHHSCCCCSCE--EEEEEEEECSCHHHHHHHHHTT
T ss_pred EEEEEEEeCCHHHHHHHHHH-HHHhCcchhcceeecCHHHHHhcccccccCCCCCc--ceEeccccccCCCCCHHHHHHH
Confidence 55566788987665554443 33443 3334556678876443311 2233321 1221 222223 3445555
Q ss_pred HHHHHhcc-CCceEEEEEecCCCCCCCCCCCCCCcccCCceEEEEEEEEeCCCC-chhHHHHHHHHHHhccccCCCCCCC
Q 042223 228 YDMFAEEE-GQSAFIALIPYGGKMNEISESEIPFPYRAGNIYKILYVVAWGEDG-ASQRYINWIRKLYGYMTPYVSKNPR 305 (376)
Q Consensus 228 ~~~~~~~~-~~~~~~~~~~~gg~~~~~~~~~ta~~~R~~~~~~~~~~~~w~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~ 305 (376)
++.+.+.+ ... .+.++..||++.+ .+.+||+||+ ..+ +.+...|.+++ +++...+|++++.+.++++......
T Consensus 334 ~~~~~~~~~~~~-~~~~~~~gg~~~~--~~~ta~~~R~-~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~ 408 (459)
T 2bvf_A 334 LDKFVSEPASGG-SVKLEIEGMPFGN--PKRTPARHRD-AMG-VLALAEWSGAAPGSEKYPELARELDAALLRAGVTTSG 408 (459)
T ss_dssp GGGCEEETTTTE-EEEEEEECCCCCC--TTCCSSCCCS-SCE-EEEEEEECTTSTTTTHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhhCCCCCc-eeEEEEeCCccCC--CCCCCcccCC-cce-EEEEEEeCCCccchHHHHHHHHHHHHHhcccccCCCC
Confidence 55444333 221 2334444888776 5678999999 567 88888999876 6777899999999999988421124
Q ss_pred ceeccCCCCCCCCCCCCCCcccccchhhhhhhhhc-HHHHHHhHhccCCCCCCCCCCCCCC
Q 042223 306 EAYLNYRDLDSGTNNQGYTSYKKDSIWGKKYFKNN-FDRLVHVKTTVDPHNFFRNEQSIPP 365 (376)
Q Consensus 306 g~Y~N~~d~~~~~~~~~~~~~~~~~~~~~~y~g~n-~~rL~~iK~kyDP~nvF~~~~~I~p 365 (376)
|+|+||+|.+. ++|.+.|||+| |+||++||+||||+|+|+++|+|+|
T Consensus 409 g~Y~N~~d~~~-------------~~~~~~~yG~~n~~rL~~iK~kyDP~~vF~~~~~I~p 456 (459)
T 2bvf_A 409 FGLLNNNSEVT-------------AEMVAEVYKPEVYSRLAAVKREYDPENRFRHNYNIDP 456 (459)
T ss_dssp ECCGGGCSSCC-------------HHHHHHHHCHHHHHHHHHHHHHHCTTCCCCSSSCCCC
T ss_pred CeeeCCCCCcc-------------hHHHHHHhCcchHHHHHHHHHHhCcccccCCCCCCCC
Confidence 79999998751 37999999986 9999999999999999999999998
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=99.97 E-value=1.3e-30 Score=264.67 Aligned_cols=116 Identities=17% Similarity=0.256 Sum_probs=101.5
Q ss_pred CeEEEcCCCcHHHHHHHHHHcCCceeccC-CCCCcccccccccCCCCCccccccccccccEeEEEEEcCCCcEEe-cCCC
Q 042223 1 KIECGQSGATLGQLYYRIAERSKNLGFPA-GVCPTVGVGGHFSGGGYGFMMGKFGLAADHVVDAHLIDAEGRLLD-RKSM 78 (376)
Q Consensus 1 ~~~~v~~G~~~~~v~~~l~~~~~~~~~~~-g~~~~vgvgG~~lggG~g~~s~~~G~~~D~v~~~~vV~a~G~~~~-~~~~ 78 (376)
++|+||||++|.+|++++.++|+ ..+. +.+++++|||++.++|.|..+++||+.+|+|+++||||+||++++ +..+
T Consensus 140 ~~v~v~aGv~~~~l~~~~~~~Gl--~~~~~~~~~~~tvGG~v~~~g~g~~~~~yG~~~d~v~~~evV~~dG~v~~~~~~~ 217 (534)
T 1w1o_A 140 RYVDAGGEQVWIDVLRASLARGV--APRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQL 217 (534)
T ss_dssp SEEEEETTCBHHHHHHHHHTTTE--EESCCCSSCCSBHHHHHTTCCCSTTHHHHCCGGGSEEEEEEEETTSCEEEEESSS
T ss_pred CEEEECCCcCHHHHHHHHHHCCC--cccCCCCCCCEEeceeccCCCccccccccccHhhhEEEEEEEeCCccEEEECCCC
Confidence 37999999999999999999884 4443 455678899999999999999999999999999999999999998 7778
Q ss_pred CcchhhhhhcCCCCCeeEEEEEEEEEeecCceEEEEEEEec
Q 042223 79 GEDLFWSIRGGGGASFGVVVAWKVRLVTVPSTVTLFTVIRN 119 (376)
Q Consensus 79 ~~dLfwalrG~Gg~~fGvVt~~~~~~~p~~~~~~~~~~~~~ 119 (376)
|+||||++||+ +|+|||||+++||++|.|+....+.+.+.
T Consensus 218 ~~dL~~~~rGs-~G~~GIVt~~~l~l~p~~~~~~~~~~~~~ 257 (534)
T 1w1o_A 218 NADLFDAVLGG-LGQFGVITRARIAVEPAPARARWVRFVYT 257 (534)
T ss_dssp SHHHHHHHTTC-TTCSEEEEEEEEEEEECCSEEEEEEEEES
T ss_pred ChhhHhhhcCC-CCCcEEEEEEEEEEEECCcceEEEEEEeC
Confidence 99999999999 67999999999999999986544444443
No 12
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=99.92 E-value=1.1e-23 Score=212.99 Aligned_cols=115 Identities=21% Similarity=0.323 Sum_probs=98.2
Q ss_pred eEEEcCCCcHHHHHHH-HHHcCCceecc-CCCCCcccccccccCCCCCccccccccccccEeEEEEEcCCCcEEe-cCCC
Q 042223 2 IECGQSGATLGQLYYR-IAERSKNLGFP-AGVCPTVGVGGHFSGGGYGFMMGKFGLAADHVVDAHLIDAEGRLLD-RKSM 78 (376)
Q Consensus 2 ~~~v~~G~~~~~v~~~-l~~~~~~~~~~-~g~~~~vgvgG~~lggG~g~~s~~~G~~~D~v~~~~vV~a~G~~~~-~~~~ 78 (376)
+|+||||++|.+++++ ++++|+ ..+ .+.++.++|||++.++|.|..+.+||.++|+|+++|||++||++++ +..+
T Consensus 133 ~v~v~aGv~~~~l~~~~l~~~Gl--~~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~~~~~~~ 210 (524)
T 2exr_A 133 FVDVSGGALWEDVLKRCVSEYGL--APRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTCSEIE 210 (524)
T ss_dssp EEEEETTCBHHHHHHHHHHHHSE--ECSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEEEEESSS
T ss_pred EEEEeCCcCHHHHHHHHHHHcCC--CCCCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEEEECCCC
Confidence 7999999999998655 558874 333 3455678899999999999999999999999999999999999998 6667
Q ss_pred CcchhhhhhcCCCCCeeEEEEEEEEEeecCceEEEEEEEec
Q 042223 79 GEDLFWSIRGGGGASFGVVVAWKVRLVTVPSTVTLFTVIRN 119 (376)
Q Consensus 79 ~~dLfwalrG~Gg~~fGvVt~~~~~~~p~~~~~~~~~~~~~ 119 (376)
|+||||++||+ +|+|||||+++||++|.|+......+.|.
T Consensus 211 ~~dL~~~~~Gs-~GtlGiIt~~tl~l~p~p~~~~~~~~~f~ 250 (524)
T 2exr_A 211 NSELFFSVLGG-LGQFGIITRARVLLQPAPDMVRWIRVVYT 250 (524)
T ss_dssp SHHHHHHHTTC-TTSSEEEEEEEEEEEECCSEEEEEEEEES
T ss_pred ChhHHhHhhcC-CCccEEEEEEEEEEEEcCCeeEEEEEEeC
Confidence 89999999999 68999999999999999986544445554
No 13
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=99.92 E-value=1.3e-24 Score=216.90 Aligned_cols=131 Identities=23% Similarity=0.304 Sum_probs=105.5
Q ss_pred CeEEEcCCCcHHHHHHHHHHcCCceeccCCCCCcccccccccCCCCCccccccccccccEeEEEEEcCCCcEEe-c----
Q 042223 1 KIECGQSGATLGQLYYRIAERSKNLGFPAGVCPTVGVGGHFSGGGYGFMMGKFGLAADHVVDAHLIDAEGRLLD-R---- 75 (376)
Q Consensus 1 ~~~~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~lggG~g~~s~~~G~~~D~v~~~~vV~a~G~~~~-~---- 75 (376)
++|+||||++|.+|+++|.++|+.+.+..+++.+++|||++..++.|..+.+||.++|+|+++|||++||++++ +
T Consensus 116 ~~v~V~aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV~~dG~v~~~~~~~~ 195 (476)
T 3pm9_A 116 NTITVEAGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVMNLLSKLK 195 (476)
T ss_dssp TEEEEETTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEECTTSCEEECCCCCS
T ss_pred CeEEECCCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEEccCCeEEEcCCccc
Confidence 47999999999999999999985444445777788999999988888889999999999999999999999996 2
Q ss_pred -CCCCcchhhhhhcCCCCCeeEEEEEEEEEeecCceEEEEEEEeccchhHHHHHHHHH
Q 042223 76 -KSMGEDLFWSIRGGGGASFGVVVAWKVRLVTVPSTVTLFTVIRNMKQNATKIVNEWQ 132 (376)
Q Consensus 76 -~~~~~dLfwalrG~Gg~~fGvVt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (376)
...+.||+|+++|+ +|+|||||+++||++|.|+......+.++..+++.+++..+.
T Consensus 196 k~~~g~dl~~l~~Gs-~GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~ 252 (476)
T 3pm9_A 196 KDNTGYDLRDLFIGA-EGTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQ 252 (476)
T ss_dssp CCCSSCCCHHHHTTS-TTSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCCcCHHHHhccC-CCCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHH
Confidence 23457999999999 789999999999999999865444444543223334444443
No 14
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=99.90 E-value=6.6e-24 Score=220.02 Aligned_cols=118 Identities=20% Similarity=0.242 Sum_probs=103.7
Q ss_pred CeEEEcCCCcHHHHHHHHHHcCCceeccCCCCCcccccccccCCCCCccccccccccccEeEEEEEcCCCcEEe-c----
Q 042223 1 KIECGQSGATLGQLYYRIAERSKNLGFPAGVCPTVGVGGHFSGGGYGFMMGKFGLAADHVVDAHLIDAEGRLLD-R---- 75 (376)
Q Consensus 1 ~~~~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~lggG~g~~s~~~G~~~D~v~~~~vV~a~G~~~~-~---- 75 (376)
++|+||||+++.||+++|.++|+.+.+..++....+|||++.+++.|..+.+||.+.|+|+++||||+||++++ .
T Consensus 274 ~~atVeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~~~~k 353 (658)
T 4bby_A 274 LTAHVEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSCQGPR 353 (658)
T ss_dssp TEEEEETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSCCCSS
T ss_pred CEEEEecCchHHHHHHHHHHcCCccCCCCCCccccEEeehhhcCCCCCCccCcCCHHHheeeEEEEeCCCcccccccccc
Confidence 47999999999999999999996655566788888899999999999999999999999999999999999985 2
Q ss_pred CCCCcchhhhhhcCCCCCeeEEEEEEEEEeecCceEEEEEEEec
Q 042223 76 KSMGEDLFWSIRGGGGASFGVVVAWKVRLVTVPSTVTLFTVIRN 119 (376)
Q Consensus 76 ~~~~~dLfwalrG~Gg~~fGvVt~~~~~~~p~~~~~~~~~~~~~ 119 (376)
....+||+|+++|+ .|||||||++++|++|.|+......+.|+
T Consensus 354 ~~aGyDL~~L~iGS-EGTLGIITeatLrL~P~P~~~~~~~~~f~ 396 (658)
T 4bby_A 354 MSTGPDIHHFIMGS-EGTLGVITEATIKIRPTPEYQKYGSVAFP 396 (658)
T ss_dssp CCSSSCTHHHHTTC-TTSSCEEEEEEEECEECCSEEEEEEEEES
T ss_pred cCCCcCHHHHhccC-CCcCcceeeeeeeeccCCccccccccccC
Confidence 23357999999999 89999999999999999987655555554
No 15
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.90 E-value=3.7e-22 Score=201.94 Aligned_cols=133 Identities=20% Similarity=0.290 Sum_probs=104.1
Q ss_pred CeEEEcCCCcHHHHHHHHHHcCCceecc-CCCCCcccccccccCCCCCccccccccccccEeEEEEEcCCCcEEe-c--C
Q 042223 1 KIECGQSGATLGQLYYRIAERSKNLGFP-AGVCPTVGVGGHFSGGGYGFMMGKFGLAADHVVDAHLIDAEGRLLD-R--K 76 (376)
Q Consensus 1 ~~~~v~~G~~~~~v~~~l~~~~~~~~~~-~g~~~~vgvgG~~lggG~g~~s~~~G~~~D~v~~~~vV~a~G~~~~-~--~ 76 (376)
++|+||||+++.+|+++|.++|+.+... .+....+||||+++++|.|+. +||..+|+|+++|||++||++++ + .
T Consensus 123 ~~v~v~aGv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~igG~~~~~g~g~~--~yG~~~d~v~~~evV~~dG~v~~~~~~~ 200 (520)
T 1wvf_A 123 CYALVEPGVTFGQMYDYIQENNLPVMLSFSAPSAIAGPVGNTMDRGVGYT--PYGEHFMMQCGMEVVLANGDVYRTGMGG 200 (520)
T ss_dssp TEEEECTTCCHHHHHHHHHHTTCSEECCCCSSCTTCCHHHHHHTTCBCSS--TTCBGGGGEEEEEEECTTSCEEECGGGG
T ss_pred CEEEECCCCCHHHHHHHHHHcCCcccCCCCCCCCeeeeeecccCCCcCCc--cccchhhcEeeeEEEcCCCcEEEeCCCc
Confidence 4799999999999999999998653221 123337889999999998886 99999999999999999999997 3 3
Q ss_pred CCCcchhhhhhcCCC---------CCeeEEEEEEEEEeecCceEEEEEEEeccchhHHHHHHHHHHHH
Q 042223 77 SMGEDLFWSIRGGGG---------ASFGVVVAWKVRLVTVPSTVTLFTVIRNMKQNATKIVNEWQYIA 135 (376)
Q Consensus 77 ~~~~dLfwalrG~Gg---------~~fGvVt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (376)
.+|+|||++.||+.| ++|||||+++||++|.|+....+.+.|+..+++.+++.+++++.
T Consensus 201 ~~~~~l~~~~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~~~~~~~~~~~~~~~ 268 (520)
T 1wvf_A 201 VPGSNTWQIFKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVEIVDALRPLR 268 (520)
T ss_dssp STTCSCTTTCSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCGGGHHHHHHHHHHHH
T ss_pred CCCchhHhhhcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 468999777777632 59999999999999999866555566654344555565666654
No 16
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=99.89 E-value=1.3e-21 Score=195.37 Aligned_cols=129 Identities=18% Similarity=0.227 Sum_probs=104.9
Q ss_pred CeEEEcCCCcHHHHHHHHHHcCCceeccCCCCCcccccccccCCCCCccccccccccccEeEEEEEcCCCcEEe-cCC-C
Q 042223 1 KIECGQSGATLGQLYYRIAERSKNLGFPAGVCPTVGVGGHFSGGGYGFMMGKFGLAADHVVDAHLIDAEGRLLD-RKS-M 78 (376)
Q Consensus 1 ~~~~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~lggG~g~~s~~~G~~~D~v~~~~vV~a~G~~~~-~~~-~ 78 (376)
++|+||||+++.+|+++|.++|+.+...+|. +.++|||.+.+|++|..++.||..+|+|+++|||++||++++ +.+ +
T Consensus 108 ~~v~v~aGv~l~~L~~~l~~~Gl~l~~~~g~-~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~~~~ 186 (481)
T 4feh_A 108 KLVDIDAGVNLDQLMKAALPFGLWVPVLPGT-RQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPTGE 186 (481)
T ss_dssp TEEEEETTCBHHHHHHHHGGGTEECSCCCSC-SCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECSSST
T ss_pred CEEEEcCCccHHHHHHHHHHcCCEEEEeCCc-CccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCCCCC
Confidence 3799999999999999999998543222344 567899999999999999999999999999999999999998 766 8
Q ss_pred CcchhhhhhcCCCCCeeEEEEEEEEEeecCceEEEEEEEeccchhHHHHHHHHHH
Q 042223 79 GEDLFWSIRGGGGASFGVVVAWKVRLVTVPSTVTLFTVIRNMKQNATKIVNEWQY 133 (376)
Q Consensus 79 ~~dLfwalrG~Gg~~fGvVt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (376)
|+|||||+||| +|+|||||+++||++|.|+...... .+... +..++++.+.+
T Consensus 187 ~~dLf~a~rgs-~G~~GIIt~~tl~l~p~~~~~~~~~-~~~~~-~l~~~~~~~~~ 238 (481)
T 4feh_A 187 DAELFWATVGG-NGLTGIIMRATIEMTPTSTAYFIAD-GDVTA-SLDETIALHSD 238 (481)
T ss_dssp THHHHHHHTTC-TTTTCEEEEEEEECEECSCSEEEEE-EEECS-SHHHHHHHHSS
T ss_pred ChHHHHHhhcc-CCCceEEEEEEEEEEeCCccEEEEE-EEeCC-CHHHHHHHHHH
Confidence 99999999999 6899999999999999986432221 12222 35566666554
No 17
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.89 E-value=5.7e-23 Score=209.60 Aligned_cols=131 Identities=20% Similarity=0.273 Sum_probs=103.5
Q ss_pred CeEEEcCCCcHHHHHHHHHHcCCceeccCCCCCcccccccccCCCCCccccccccccccEeEEEEEcCCCcEEe----cC
Q 042223 1 KIECGQSGATLGQLYYRIAERSKNLGFPAGVCPTVGVGGHFSGGGYGFMMGKFGLAADHVVDAHLIDAEGRLLD----RK 76 (376)
Q Consensus 1 ~~~~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~lggG~g~~s~~~G~~~D~v~~~~vV~a~G~~~~----~~ 76 (376)
++|+||||+++.+|+++|.++|+.+....++...++|||++.+++.|..+.+||.++|+|+++|||++||++++ +.
T Consensus 205 ~~v~v~aGv~~~~l~~~l~~~Gl~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~~~~ 284 (584)
T 2uuu_A 205 MTACIQVGIMGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARS 284 (584)
T ss_dssp TEEEEETTCBHHHHHHHHHHTTEECCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC-----
T ss_pred CEEEECCCCcHHHHHHHHHHcCCeeCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEEECCcccc
Confidence 47999999999999999999985332222334567899999999999999999999999999999999999885 34
Q ss_pred CCCcchhhhhhcCCCCCeeEEEEEEEEEeecCceEEEEEEEeccchhHHHHHHHHHHHH
Q 042223 77 SMGEDLFWSIRGGGGASFGVVVAWKVRLVTVPSTVTLFTVIRNMKQNATKIVNEWQYIA 135 (376)
Q Consensus 77 ~~~~dLfwalrG~Gg~~fGvVt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (376)
..++||+|+++|+ +|+|||||+++||++|.|+....+.+.++. ..+++.+++++.
T Consensus 285 ~~g~dl~~~~~Gs-eGtlGIIT~~tlrl~p~p~~~~~~~~~f~~---~~~a~~~~~~~~ 339 (584)
T 2uuu_A 285 GAGINYKHIILGS-EGTLGIITEAVMKVHAVPQAVEYYGFLFPT---FAHAVSALQQIR 339 (584)
T ss_dssp --CCCTHHHHTTC-TTSSCEEEEEEEECEECCSEEEEEEEEESS---HHHHHHHHHHHH
T ss_pred CCCcchhhhhccC-CCCcEEEEEEEEEEEecccceEEEEEEcCC---HHHHHHHHHHHH
Confidence 5689999999999 689999999999999999865555555542 334444444443
No 18
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=99.89 E-value=2.6e-21 Score=190.95 Aligned_cols=105 Identities=19% Similarity=0.212 Sum_probs=94.7
Q ss_pred CeEEEcCCCcHHHHHHHHHHcCCceecc-CCCCCcccccccccCCCCCccccccccccccEeEEEEEcCCCcEEe-cCCC
Q 042223 1 KIECGQSGATLGQLYYRIAERSKNLGFP-AGVCPTVGVGGHFSGGGYGFMMGKFGLAADHVVDAHLIDAEGRLLD-RKSM 78 (376)
Q Consensus 1 ~~~~v~~G~~~~~v~~~l~~~~~~~~~~-~g~~~~vgvgG~~lggG~g~~s~~~G~~~D~v~~~~vV~a~G~~~~-~~~~ 78 (376)
++|+||||+++.+|+++|.++|+ .++ .+.++.++|||++.+|+||.. .+||..+|+|+++|||++||++++ +..+
T Consensus 81 ~~v~v~aG~~l~~l~~~l~~~Gl--~l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~~ 157 (422)
T 2vfr_A 81 RTVRVGGGVRYAELARVVHARGL--ALPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARGD 157 (422)
T ss_dssp TEEEEETTCBHHHHHHHHHHTTE--ECSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETTS
T ss_pred CEEEEcCCCCHHHHHHHHHHcCC--cccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCCC
Confidence 47999999999999999999985 455 488899999999999999965 799999999999999999999998 6667
Q ss_pred CcchhhhhhcCCCCCeeEEEEEEEEEeecCceE
Q 042223 79 GEDLFWSIRGGGGASFGVVVAWKVRLVTVPSTV 111 (376)
Q Consensus 79 ~~dLfwalrG~Gg~~fGvVt~~~~~~~p~~~~~ 111 (376)
|+ ||+++|+ .|+|||||++++|++|.|+..
T Consensus 158 ~~--f~~~~g~-~G~lGvit~~~l~l~p~~~~~ 187 (422)
T 2vfr_A 158 ER--FGGAVTS-LGALGVVTSLTLDLEPAYEME 187 (422)
T ss_dssp TT--GGGTSSC-TTTTCEEEEEEEECEECCEEE
T ss_pred CC--cceEEec-CCCCEEEEEEEEEEEecCceE
Confidence 76 9999998 689999999999999998754
No 19
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.84 E-value=1.5e-19 Score=184.16 Aligned_cols=133 Identities=14% Similarity=0.105 Sum_probs=102.8
Q ss_pred CeEEEcCCCcHHHHHHHHHHcCCc--eeccCCCCCcccccccccCCCCCccccccccccccEeEEEEEcCCCcEEe-cC-
Q 042223 1 KIECGQSGATLGQLYYRIAERSKN--LGFPAGVCPTVGVGGHFSGGGYGFMMGKFGLAADHVVDAHLIDAEGRLLD-RK- 76 (376)
Q Consensus 1 ~~~~v~~G~~~~~v~~~l~~~~~~--~~~~~g~~~~vgvgG~~lggG~g~~s~~~G~~~D~v~~~~vV~a~G~~~~-~~- 76 (376)
++|+||||+++.+|+++|.++|+. +.+..+.....|+||++.++|.|+. +||..+|+|+++|||++||++++ +.
T Consensus 138 ~~v~v~aGv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~ 215 (560)
T 1e8g_A 138 AYCVVEPGVTYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMG 215 (560)
T ss_dssp TEEEECTTCBHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGG
T ss_pred CEEEEeCCCCHHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCcc--cceeHHHheeeeEEEeCCCCEEEecCc
Confidence 479999999999999999999865 4433344446779999998888875 99999999999999999999997 43
Q ss_pred -CCCc---------------chhhhhhcCC----------CCCeeEEEEEEEEEeecCceEEEEEEEeccchhHHHHHHH
Q 042223 77 -SMGE---------------DLFWSIRGGG----------GASFGVVVAWKVRLVTVPSTVTLFTVIRNMKQNATKIVNE 130 (376)
Q Consensus 77 -~~~~---------------dLfwalrG~G----------g~~fGvVt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 130 (376)
.+|+ +++|+++++| +|+|||||++++|++|.|+....+.+.|+..+++.+++.+
T Consensus 216 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~ 295 (560)
T 1e8g_A 216 ALPDPKRPETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQAVDI 295 (560)
T ss_dssp GSCCCCCGGGTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEEEECSTTHHHHHHHH
T ss_pred ccCcccccccccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHHHHHH
Confidence 2332 6778877542 4799999999999999998765555666543345555656
Q ss_pred HHHHH
Q 042223 131 WQYIA 135 (376)
Q Consensus 131 ~~~~~ 135 (376)
+.++.
T Consensus 296 ~~~~~ 300 (560)
T 1e8g_A 296 IRPLR 300 (560)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66554
No 20
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.83 E-value=8.6e-21 Score=170.06 Aligned_cols=107 Identities=23% Similarity=0.266 Sum_probs=90.8
Q ss_pred CeEEEcCCCcHHHHHHHHHHcCCceeccCCCCCcccccccccCCCCCccccccccccccEeEEEEEcCCCcEEe-cCC--
Q 042223 1 KIECGQSGATLGQLYYRIAERSKNLGFPAGVCPTVGVGGHFSGGGYGFMMGKFGLAADHVVDAHLIDAEGRLLD-RKS-- 77 (376)
Q Consensus 1 ~~~~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~lggG~g~~s~~~G~~~D~v~~~~vV~a~G~~~~-~~~-- 77 (376)
++|+||+|+++.+|+++|.++|+.+....|+++. +|||++.+|++| ++||.. |+|++++||++||++++ +..
T Consensus 8 ~~v~V~aGv~l~~L~~~l~~~Gl~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~i~~~~~~~~ 82 (219)
T 2yvs_A 8 QYLVAPGEADLLEVHARLAGTGLFPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGRRVRAGGVVV 82 (219)
T ss_dssp TEEEEETTCCHHHHHHHHTTTTEECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSCEEEEECSSC
T ss_pred CEEEEcCCCcHHHHHHHHHHcCCEEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCCEEEECCccc
Confidence 4799999999999999999988433222366666 999999999999 999999 99999999999999996 432
Q ss_pred ---CCcchhhhhhcCCCCCeeEEEEEEEEEeecCceEEE
Q 042223 78 ---MGEDLFWSIRGGGGASFGVVVAWKVRLVTVPSTVTL 113 (376)
Q Consensus 78 ---~~~dLfwalrG~Gg~~fGvVt~~~~~~~p~~~~~~~ 113 (376)
.++||||+++|+ +|+|||||+++||++|.++....
T Consensus 83 kn~~gydl~~~~~Gs-~G~lGIVt~~tlrl~p~~~~~~~ 120 (219)
T 2yvs_A 83 KNVQGYDLVRLFVGS-FGLLGRAEEVVLRLRPGRAQAFL 120 (219)
T ss_dssp SSSSCSCHHHHHTTC-TTTTCEEEEEEEECEECSEEEEE
T ss_pred cCCCCcchHHHhccC-CCceEEEEEEEEEEEECCcccEE
Confidence 347999999998 68999999999999999875433
No 21
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.67 E-value=7e-17 Score=161.71 Aligned_cols=103 Identities=14% Similarity=0.142 Sum_probs=86.6
Q ss_pred eEEEcCCCcHHHHHHHHHHcCCceecc-CCCCCcccccccccCCCCCcc----------ccccccccccEeEEEEEcCCC
Q 042223 2 IECGQSGATLGQLYYRIAERSKNLGFP-AGVCPTVGVGGHFSGGGYGFM----------MGKFGLAADHVVDAHLIDAEG 70 (376)
Q Consensus 2 ~~~v~~G~~~~~v~~~l~~~~~~~~~~-~g~~~~vgvgG~~lggG~g~~----------s~~~G~~~D~v~~~~vV~a~G 70 (376)
+|+||||+++.+|+++|.++|+ .++ .+.++.++|||++.+|++|.. +++||+.+|+|++++||++||
T Consensus 101 tVtV~AGv~l~~L~~~L~~~GL--~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~~D~V~~levV~adG 178 (540)
T 3js8_A 101 KVTAQAGITMEALLTGLEKAGL--GVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISNLVLSLTAVVYDK 178 (540)
T ss_dssp EEEEETTSBHHHHHHHHHHTTE--ECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGGGEEEEEEEEEET
T ss_pred EEEEccCCCHHHHHHHHHHcCC--EEEecCCCCCeEEcccccCCCCcccccccccccccccccccHHHhEEEEEEEcCCC
Confidence 7999999999999999999984 444 244577899999998888875 689999999999999999999
Q ss_pred c-----EEe-cCCCCcchhhhhhcCCCCCeeEEEEEEEEEeecCce
Q 042223 71 R-----LLD-RKSMGEDLFWSIRGGGGASFGVVVAWKVRLVTVPST 110 (376)
Q Consensus 71 ~-----~~~-~~~~~~dLfwalrG~Gg~~fGvVt~~~~~~~p~~~~ 110 (376)
+ +++ ++ +|+||||+++|+ |+ ||||+++||++|.++.
T Consensus 179 ~~~~~~i~~~s~-~~~DL~a~r~G~--G~-gIVTevtlrl~P~~~l 220 (540)
T 3js8_A 179 ASGAYALRKFAR-NDPQIAPLLAHV--GR-SLIVEATLQAAPNQRL 220 (540)
T ss_dssp TTTEEEEEEEET-TSGGGHHHHTCT--TS-SCEEEEEEEEEECCEE
T ss_pred CCceeeEEEeCC-CChhHHHHHhcC--CC-eEEEEEEEEEEECCce
Confidence 8 666 54 689996665554 35 6999999999999864
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.66 E-value=2.5e-17 Score=167.03 Aligned_cols=117 Identities=14% Similarity=0.103 Sum_probs=96.1
Q ss_pred CeEEEcCCCcHHHHHHHHHHcCCceec-cCCCCCcccccccccCCCCCccccccccccc----------------cEeEE
Q 042223 1 KIECGQSGATLGQLYYRIAERSKNLGF-PAGVCPTVGVGGHFSGGGYGFMMGKFGLAAD----------------HVVDA 63 (376)
Q Consensus 1 ~~~~v~~G~~~~~v~~~l~~~~~~~~~-~~g~~~~vgvgG~~lggG~g~~s~~~G~~~D----------------~v~~~ 63 (376)
++|+||||+++.+|+++|.++|+.+.. ++++|..++|||.+..+++|..+.+||..+| ||+++
T Consensus 114 ~~v~v~aGv~l~~L~~~l~~~Gl~~p~~~g~s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~~~~~~l~~~~vl~l 193 (571)
T 1f0x_A 114 EQVLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGI 193 (571)
T ss_dssp TEEEECTTCBHHHHHHHHGGGTEECSCCCGGGGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEECTTSCEEEEECSSB
T ss_pred CeEEEcCCcCHHHHHHHHHhcCccCCcCCCccCCCceecccccCCCCcccccCCCchhhhhhhheeccCCceEEEEeeeE
Confidence 479999999999999999999853212 2345666789999999999999999999999 99999
Q ss_pred EEEcCCCcEEe-cC---------------CCCc-------------------chhhhh--hcCCCCCeeEEEEEEEEEee
Q 042223 64 HLIDAEGRLLD-RK---------------SMGE-------------------DLFWSI--RGGGGASFGVVVAWKVRLVT 106 (376)
Q Consensus 64 ~vV~a~G~~~~-~~---------------~~~~-------------------dLfwal--rG~Gg~~fGvVt~~~~~~~p 106 (376)
|||++||++++ +. .+|+ ||+|++ +|+ +|+||| |++++|++|
T Consensus 194 evVl~dG~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~Gs-eGtlGV-t~~tl~l~p 271 (571)
T 1f0x_A 194 DLGETPEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGC-AGKLAV-FAVRLDTFE 271 (571)
T ss_dssp CCCSSHHHHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTC-TTSSEE-EEEEEECEE
T ss_pred EEEcCCCcEEEecCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCC-CCceeE-EEEEEEEEe
Confidence 99999999986 31 2333 988888 998 789999 999999999
Q ss_pred cCceEEEEEEEec
Q 042223 107 VPSTVTLFTVIRN 119 (376)
Q Consensus 107 ~~~~~~~~~~~~~ 119 (376)
.|+....+.+.++
T Consensus 272 ~p~~~~~~~~~~~ 284 (571)
T 1f0x_A 272 AEKNQQVFYIGTN 284 (571)
T ss_dssp CCSSCEEEEEEES
T ss_pred cCCeEEEEEEEeC
Confidence 9986555555454
No 23
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.65 E-value=2.7e-16 Score=160.05 Aligned_cols=106 Identities=9% Similarity=0.070 Sum_probs=84.3
Q ss_pred CeEEEcCCCcHHHHHHHHHHcCCceeccCCCCCcccccccccC---------CCCCcc-ccccccccccEeEEEEEcCCC
Q 042223 1 KIECGQSGATLGQLYYRIAERSKNLGFPAGVCPTVGVGGHFSG---------GGYGFM-MGKFGLAADHVVDAHLIDAEG 70 (376)
Q Consensus 1 ~~~~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~lg---------gG~g~~-s~~~G~~~D~v~~~~vV~a~G 70 (376)
++|+||||+++.+|+++|.++|+.+.+. +..+.++|||.+.. ||+|++ +++||..+|+|+++|||++||
T Consensus 106 ~~v~v~aGv~l~~L~~~l~~~Gl~l~~~-~~~~~~TvGG~i~~~~~G~~l~~gG~~~~s~~~~G~~~d~V~~~evV~~dG 184 (561)
T 2i0k_A 106 ATVTAGAGASIEAIVTELQKHDLGWANL-PAPGVLSIGGALAVNAHGAALPAVGQTTLPGHTYGSLSNLVTELTAVVWNG 184 (561)
T ss_dssp CEEEEETTSBHHHHHHHHHHTTEECSSC-CSCTTCBHHHHHHTTCCCSCCCCTTCCCCTTCCSSCGGGGEEEEEEEEECS
T ss_pred cEEEEcCCCCHHHHHHHHHHcCCccccc-CCCCCcccCCCcccCCcccccccCCcccccccccccHhheEEEEEEEeCCC
Confidence 4799999999999999999998543322 33355667776654 555555 557999999999999999999
Q ss_pred c---EEe-cCCCCcchhhhhhcCCCCCeeEEEEEEEEEeecCceE
Q 042223 71 R---LLD-RKSMGEDLFWSIRGGGGASFGVVVAWKVRLVTVPSTV 111 (376)
Q Consensus 71 ~---~~~-~~~~~~dLfwalrG~Gg~~fGvVt~~~~~~~p~~~~~ 111 (376)
+ +++ ++ +|+||+|+++|. |. ||||+++||++|.++..
T Consensus 185 ~~~~~~~~~~-~~~dl~~a~~g~-G~--giIt~~tl~l~p~~~~~ 225 (561)
T 2i0k_A 185 TTYALETYQR-NDPRITPLLTNL-GR--CFLTSVTMQAGPNFRQR 225 (561)
T ss_dssp SSEEEEEEET-TSGGGHHHHSCT-TS--SCEEEEEEECEECCEEE
T ss_pred CEEEeeeccC-CCccHHHHHhcC-CC--EEEEEEEEEEEECCceE
Confidence 9 666 43 489999999977 33 89999999999998743
No 24
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.43 E-value=1.4e-13 Score=130.18 Aligned_cols=99 Identities=22% Similarity=0.219 Sum_probs=76.3
Q ss_pred eEEEcCCCcHHHHHHHHHHcCC-ceeccCCCCCcccccccccCCCCCccccccccccccEeEEEEEcCCCcEEe-cCCCC
Q 042223 2 IECGQSGATLGQLYYRIAERSK-NLGFPAGVCPTVGVGGHFSGGGYGFMMGKFGLAADHVVDAHLIDAEGRLLD-RKSMG 79 (376)
Q Consensus 2 ~~~v~~G~~~~~v~~~l~~~~~-~~~~~~g~~~~vgvgG~~lggG~g~~s~~~G~~~D~v~~~~vV~a~G~~~~-~~~~~ 79 (376)
+|+||||++|.+|++++.++|+ ++-+..|.+.+||-+...-.||+| |..+|+|++++||++||++++ + +
T Consensus 116 ~v~v~aG~~~~~l~~~l~~~Gl~Gle~~~giPgTVGGav~~NaGgyG------g~~~d~v~~vevV~~~G~i~~~~---~ 186 (322)
T 3tx1_A 116 QIVAMSGAKLIDTAKFALNESLSGLEFACGIPGSIGGALHMNAGAYG------GEISDVLEAATVLTQTGELKKLK---R 186 (322)
T ss_dssp EEEEETTSBHHHHHHHHHHTTEESCGGGTTCCSBHHHHHHHTCEETT------EEHHHHEEEEEEECTTSCEEEEE---G
T ss_pred EEEEecCcCHHHHHHHHHHcCCcccccCCCCcchhHHHHHhCccCcc------cchHhhEEEEEEEcCCCCEEEec---h
Confidence 7899999999999999999984 223566777665532223355544 799999999999999999997 4 3
Q ss_pred cchhhhhhcCCC-CCeeEEEEEEEEEeecCc
Q 042223 80 EDLFWSIRGGGG-ASFGVVVAWKVRLVTVPS 109 (376)
Q Consensus 80 ~dLfwalrG~Gg-~~fGvVt~~~~~~~p~~~ 109 (376)
+|++|++|++.- +++||||+++||++|.|+
T Consensus 187 ~~~~~~yR~s~~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 187 SELKAAYRFSTIAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp GGCC--CC-CTTTGGGCEEEEEEEECEECCH
T ss_pred HHcCcchhhcccCCCCEEEEEEEEEEEeCCH
Confidence 699999999843 368999999999999874
No 25
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.41 E-value=5.1e-13 Score=127.71 Aligned_cols=99 Identities=15% Similarity=0.072 Sum_probs=86.2
Q ss_pred eEEEcCCCcHHHHHHHHHHcCCceeccCCCCCcccccccccCCCCCcccccccc-ccccEeEEEEEcC-CCcEEe-cCCC
Q 042223 2 IECGQSGATLGQLYYRIAERSKNLGFPAGVCPTVGVGGHFSGGGYGFMMGKFGL-AADHVVDAHLIDA-EGRLLD-RKSM 78 (376)
Q Consensus 2 ~~~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~lggG~g~~s~~~G~-~~D~v~~~~vV~a-~G~~~~-~~~~ 78 (376)
+++||||+.|.+|.+++.++|+ .|....+|+.| ++||+...+.+.||. .+|+|++++||++ ||++++ +
T Consensus 94 ~v~v~AG~~~~~l~~~a~~~Gl-----~GlE~l~gIPG-tVGGav~~NaGaYG~e~~d~v~~vevv~~~~G~i~~~~--- 164 (357)
T 3i99_A 94 RLHVAGGEDWPSLVSWCVEQGI-----GGLENLALIPG-CAGSAPIQNIGAYGVEFKDVCDYVEYLCLETGTVKRLT--- 164 (357)
T ss_dssp EEEEETTSBHHHHHHHHHHTTC-----TTCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE---
T ss_pred EEEEeCCCcHHHHHHHHHHcCC-----cCccccCCCCc-hhHHHHHhchhhhhhhHHhhEeEEEEEECCCCcEEEEe---
Confidence 6899999999999999999984 36666677766 788999999999997 8999999999999 999997 4
Q ss_pred CcchhhhhhcCCC----CCeeEEEEEEEEEeecCc
Q 042223 79 GEDLFWSIRGGGG----ASFGVVVAWKVRLVTVPS 109 (376)
Q Consensus 79 ~~dLfwalrG~Gg----~~fGvVt~~~~~~~p~~~ 109 (376)
+.||+|+.|+++. +++||||+++||++|.++
T Consensus 165 ~~dl~f~YR~s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 165 MEECQFGYRDSIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp TGGGCCBTTBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred HHHcCcccccccCCCccCCCEEEEEEEEEEEeCCc
Confidence 3699999999843 379999999999999764
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.28 E-value=8.9e-12 Score=118.66 Aligned_cols=99 Identities=13% Similarity=0.083 Sum_probs=85.3
Q ss_pred eEEEcCCCcHHHHHHHHHHcCCceeccCCCCCcccccccccCCCCCcccccccc-ccccEeEEEEEcC-CCcEEe-cCCC
Q 042223 2 IECGQSGATLGQLYYRIAERSKNLGFPAGVCPTVGVGGHFSGGGYGFMMGKFGL-AADHVVDAHLIDA-EGRLLD-RKSM 78 (376)
Q Consensus 2 ~~~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~lggG~g~~s~~~G~-~~D~v~~~~vV~a-~G~~~~-~~~~ 78 (376)
+++||||++|.+|.+++.++|+ .|....+|+.| ++||+...+.+.||. .+|+|++++||++ +|++++ +
T Consensus 78 ~v~vgAG~~~~~l~~~~~~~Gl-----~Gle~~~gIPG-tVGGa~~~NaGayG~ei~d~v~~v~vv~~~~G~v~~~~--- 148 (340)
T 1uxy_A 78 YLHVGAGENWHRLVKYTLQEGM-----PGLENLALIPG-CVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLT--- 148 (340)
T ss_dssp EEEEETTSBHHHHHHHHHHTTC-----CSCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE---
T ss_pred EEEEecCCCHHHHHHHHHHCCC-----CccccccCCcc-chhHHHHhccccchhhHHhheeEEEEEECCCCcEEEEe---
Confidence 6899999999999999999884 35666677766 889999999999995 8999999999996 999997 4
Q ss_pred CcchhhhhhcCC----CCCeeEEEEEEEEEeecCc
Q 042223 79 GEDLFWSIRGGG----GASFGVVVAWKVRLVTVPS 109 (376)
Q Consensus 79 ~~dLfwalrG~G----g~~fGvVt~~~~~~~p~~~ 109 (376)
+.|++|+.|++. ++++||||+++||++|.+.
T Consensus 149 ~~d~~~gYR~s~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 149 AKECRFGYRDSIFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp TGGGTCBTTBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred HHHhccccCcCccCCcCCCCEEEEEEEEEEEcCCC
Confidence 369999999873 1369999999999999864
No 27
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.24 E-value=4.4e-12 Score=120.47 Aligned_cols=95 Identities=19% Similarity=0.205 Sum_probs=72.9
Q ss_pred CeEEEcCCCcHHHHHHHHHHcCC-ceeccCCCCCcccccccccCCCCCccccccc-cccccEeEEEEEcCCCcEEe-cCC
Q 042223 1 KIECGQSGATLGQLYYRIAERSK-NLGFPAGVCPTVGVGGHFSGGGYGFMMGKFG-LAADHVVDAHLIDAEGRLLD-RKS 77 (376)
Q Consensus 1 ~~~~v~~G~~~~~v~~~l~~~~~-~~~~~~g~~~~vgvgG~~lggG~g~~s~~~G-~~~D~v~~~~vV~a~G~~~~-~~~ 77 (376)
++++||||++|.+|++++.++|+ ++....+... .|||.+..+..| || ..+|+|++++||++||++++ +.
T Consensus 109 ~~v~v~aGv~~~~l~~~l~~~Gl~gLe~~~~~Pg--tvGG~i~~nagg-----yG~~~~d~v~~v~vv~~~G~i~~~~~- 180 (326)
T 1hsk_A 109 DAIIAGSGAAIIDVSRVARDYALTGLEFACGIPG--SIGGAVYMNAGA-----YGGEVKDCIDYALCVNEQGSLIKLTT- 180 (326)
T ss_dssp TEEEEETTSBHHHHHHHHHHTTEESCGGGTTCCS--BHHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSCEEEEET-
T ss_pred CEEEEeCCCcHHHHHHHHHHCCCccccccCCCcc--hhhHHHhccccc-----CchhhhhhEEEEEEEeCCCCEEEECh-
Confidence 47999999999999999999985 1112233333 366666544333 88 99999999999999999997 43
Q ss_pred CCcchhhhhhcCC---CCCeeEEEEEEEEEeec
Q 042223 78 MGEDLFWSIRGGG---GASFGVVVAWKVRLVTV 107 (376)
Q Consensus 78 ~~~dLfwalrG~G---g~~fGvVt~~~~~~~p~ 107 (376)
.|++|+.|+.. .| ||||+++||++|.
T Consensus 181 --~~~~~gyr~~~l~s~g--gIIt~~~l~l~p~ 209 (326)
T 1hsk_A 181 --KELELDYRNSIIQKEH--LVVLEAAFTLAPG 209 (326)
T ss_dssp --TTTTCBTTBCHHHHTT--CEEEEEEEECEEC
T ss_pred --HHcCCCccccccCCCC--EEEEEEEEEEEcC
Confidence 38889998741 23 9999999999998
No 28
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.22 E-value=9.2e-12 Score=114.58 Aligned_cols=95 Identities=21% Similarity=0.222 Sum_probs=81.0
Q ss_pred EEcCCCcHHHHHHHHHHcCCceeccCCCCCcccccccccCCCCCccccccc-cccccEeEEEEEcCCCcEEe-cCCCCcc
Q 042223 4 CGQSGATLGQLYYRIAERSKNLGFPAGVCPTVGVGGHFSGGGYGFMMGKFG-LAADHVVDAHLIDAEGRLLD-RKSMGED 81 (376)
Q Consensus 4 ~v~~G~~~~~v~~~l~~~~~~~~~~~g~~~~vgvgG~~lggG~g~~s~~~G-~~~D~v~~~~vV~a~G~~~~-~~~~~~d 81 (376)
+||||+.|.+|.+++.++| + .|.+..+|+.| ++||+...+.+.|| ..+|+|++++|| +||++++ + +.|
T Consensus 77 ~v~aG~~~~~l~~~~~~~G--l---~Gle~~~giPG-tvGGav~~NaGayG~e~~d~v~~v~vv-~~G~v~~~~---~~~ 146 (268)
T 2gqt_A 77 WVGAGTLLPLLVQEAARAG--L---SGLEGLLGIPA-QVGGAVKMNAGTRFGEMADALEAVEVF-HDGAFHVYC---PEE 146 (268)
T ss_dssp EEETTSBHHHHHHHHHHTT--E---ESCGGGTTCCC-BHHHHHHTTCEETTEEGGGGEEEEEEE-ETTEEEEEC---GGG
T ss_pred EEECCCCHHHHHHHHHHcC--C---cCCccccCccc-hhHHHHHhccccCchhHHhheeEEEEE-CCCcEEEEc---hHH
Confidence 6999999999999999987 4 26677778877 89999999999999 699999999999 9999997 4 368
Q ss_pred hhhhhhcCCCCCeeEEEEEEEEEeecC
Q 042223 82 LFWSIRGGGGASFGVVVAWKVRLVTVP 108 (376)
Q Consensus 82 LfwalrG~Gg~~fGvVt~~~~~~~p~~ 108 (376)
|+|+.|+++-..=||||+++||++|.+
T Consensus 147 l~~~YR~s~~~~~gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 147 LGFGYRKSHLPPGGIVTRVRLKLKERP 173 (268)
T ss_dssp SCCBTTBCCCSTTCEEEEEEECCEECC
T ss_pred cccccCCCCcCCCceEEEEEEEEEeCC
Confidence 999999984111149999999999974
No 29
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=92.37 E-value=0.24 Score=49.98 Aligned_cols=78 Identities=10% Similarity=0.106 Sum_probs=48.9
Q ss_pred CcccCCceEEEEEEEEeCCCCchhHHHHHHHHHHhccccCCCCCCCceeccCCCCCCCCCCCCCCcccccchhhhhhhhh
Q 042223 260 FPYRAGNIYKILYVVAWGEDGASQRYINWIRKLYGYMTPYVSKNPREAYLNYRDLDSGTNNQGYTSYKKDSIWGKKYFKN 339 (376)
Q Consensus 260 ~~~R~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~Y~N~~d~~~~~~~~~~~~~~~~~~~~~~y~g~ 339 (376)
|.|-....+|+.+.. +...+ ..+..+++.+.+..+ +|+|..|++... . |++
T Consensus 487 ~GH~g~g~~H~~~~~--~~~~~---~~~i~~~~~~~v~~~-----GGsisaEHGvG~--------------~-----~~~ 537 (571)
T 1f0x_A 487 YGHFMCYVFHQDYIV--KKGVD---VHALKEQMLELLQQR-----GAQYPAEHNVGH--------------L-----YKA 537 (571)
T ss_dssp EEETTTTEEEEEEEE--ETTCC---HHHHHHHHHHHHHHT-----TCBSCSSSCCTT--------------T-----SCC
T ss_pred EEEEcCCceEEeeec--CCchh---HHHHHHHHHHHHHHc-----CCeEEeeccCCc--------------c-----cCC
Confidence 555544556665543 22112 334444455555555 688988887651 1 233
Q ss_pred cHHHHHHhHhccCCCCCCCCCCCCCCCC
Q 042223 340 NFDRLVHVKTTVDPHNFFRNEQSIPPLS 367 (376)
Q Consensus 340 n~~rL~~iK~kyDP~nvF~~~~~I~p~~ 367 (376)
..+ |++||+.+||+|+|+....+.|..
T Consensus 538 ~~~-m~~iK~~~DP~~ilNPGk~~t~~~ 564 (571)
T 1f0x_A 538 PET-LQKFYRENDPTNSMNPGIGKTSKR 564 (571)
T ss_dssp CHH-HHHHHHHHCTTCCBSTTTTTCCCS
T ss_pred HHH-HHHHHHHhCCCCCCCCCcCcCCcc
Confidence 344 999999999999999998777643
No 30
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=77.83 E-value=3.6 Score=41.04 Aligned_cols=23 Identities=22% Similarity=0.361 Sum_probs=21.2
Q ss_pred hhcHHHHHHhHhccCCCCCCCCC
Q 042223 338 KNNFDRLVHVKTTVDPHNFFRNE 360 (376)
Q Consensus 338 g~n~~rL~~iK~kyDP~nvF~~~ 360 (376)
|+|++..+++++++||+++|.++
T Consensus 511 ~~~~~~~~~~~~~~DP~~~F~n~ 533 (540)
T 3js8_A 511 AANWDAAKAALAAYDPYRLFSSP 533 (540)
T ss_dssp GGSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCCHHHHHHHHHhcCCCcccCCH
Confidence 58999999999999999999864
No 31
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=64.15 E-value=2.9 Score=41.94 Aligned_cols=22 Identities=32% Similarity=0.558 Sum_probs=20.6
Q ss_pred hcHHHHHHhHhccCCCCCCCCC
Q 042223 339 NNFDRLVHVKTTVDPHNFFRNE 360 (376)
Q Consensus 339 ~n~~rL~~iK~kyDP~nvF~~~ 360 (376)
.++++.+++|+++||+++|.+.
T Consensus 533 p~~~~f~~~r~~~DP~g~F~n~ 554 (561)
T 2i0k_A 533 ENWDTARARYNQIDPHRVFTNG 554 (561)
T ss_dssp SSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCHHHHHHHHHhcCCCCccCCH
Confidence 8999999999999999999864
No 32
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=31.35 E-value=47 Score=29.83 Aligned_cols=93 Identities=17% Similarity=0.103 Sum_probs=52.5
Q ss_pred eEEEcCCCcHHHHHH--HHHHcCCc-ee----ccCCC-CC-cccccccccCCCCCccccccccccccEe-------EEEE
Q 042223 2 IECGQSGATLGQLYY--RIAERSKN-LG----FPAGV-CP-TVGVGGHFSGGGYGFMMGKFGLAADHVV-------DAHL 65 (376)
Q Consensus 2 ~~~v~~G~~~~~v~~--~l~~~~~~-~~----~~~g~-~~-~vgvgG~~lggG~g~~s~~~G~~~D~v~-------~~~v 65 (376)
.++||+|+++.+|.+ .+.+. +. +. ..+|. .- ..++||.+..+- + ..|.+. .+++
T Consensus 69 ~l~iGA~~tl~~l~~~~~~~~~-~~~L~~a~~~~a~~qiRN~gTvGGni~~~~-~--------~~D~~~~l~Al~A~v~~ 138 (287)
T 1ffv_C 69 TVVIGAMTVENDLISSPIVQAR-LPLLAEAAKLIADPQVRNRGTIGGDIAHGD-P--------GNDHPALSIAVEAHFVL 138 (287)
T ss_dssp EEEEETTCBHHHHHHCHHHHHH-CHHHHHHGGGSSCTTGGGTCBHHHHHHTCC-T--------TCSHHHHHHHTTCEEEE
T ss_pred EEEEccCCcHHHHhhChHHHHH-hHHHHHHHHHhCCHHHhcceechhhhccCC-C--------cHHHHHHHHHcCcEEEE
Confidence 578999999999985 44332 21 11 11121 11 235788887652 1 345544 5888
Q ss_pred EcCCCcEEecCCCCcchhhhhhcCCCCCeeEEEEEEEEEeec
Q 042223 66 IDAEGRLLDRKSMGEDLFWSIRGGGGASFGVVVAWKVRLVTV 107 (376)
Q Consensus 66 V~a~G~~~~~~~~~~dLfwalrG~Gg~~fGvVt~~~~~~~p~ 107 (376)
..++|+..-. -.|+|..-|=---..=-|||+++|...+.
T Consensus 139 ~~~~G~r~i~---~~df~~g~~~t~l~~~eii~~i~ip~~~~ 177 (287)
T 1ffv_C 139 EGPNGRRTVP---ADGFFLGTYMTLLEENEVMVEIRVPAFAQ 177 (287)
T ss_dssp EETTEEEEEE---STTTEEETTEESCCTTCEEEEEEEECCCT
T ss_pred EcCCceEEEE---HHHHhcCcccccCCCCCEEEEEEecCCCC
Confidence 8999932212 14777654311000014899999987654
No 33
>2gvs_A Chemosensory protein CSP-SG4; alpha-coil, lipid binding protein; NMR {Schistocerca gregaria}
Probab=31.16 E-value=17 Score=27.82 Aligned_cols=15 Identities=20% Similarity=0.468 Sum_probs=12.2
Q ss_pred HHHhHhccCCCCCCC
Q 042223 344 LVHVKTTVDPHNFFR 358 (376)
Q Consensus 344 L~~iK~kyDP~nvF~ 358 (376)
-.+|++||||++-+.
T Consensus 83 W~~L~~KyDP~g~y~ 97 (109)
T 2gvs_A 83 WAQLKAKYDPDGTYS 97 (109)
T ss_dssp HHHHHHHHCTTCTTT
T ss_pred HHHHHHHHCCCchHH
Confidence 356789999999876
No 34
>1k19_A Chemosensory protein CSP2; pheromone, lipid transport; NMR {Mamestra brassicae} SCOP: a.118.21.1 PDB: 1kx8_A 1kx9_A 1n8u_A* 1n8v_A* 2jnt_A
Probab=28.48 E-value=20 Score=27.62 Aligned_cols=14 Identities=21% Similarity=0.418 Sum_probs=11.4
Q ss_pred HHhHhccCCCCCCC
Q 042223 345 VHVKTTVDPHNFFR 358 (376)
Q Consensus 345 ~~iK~kyDP~nvF~ 358 (376)
.+|++||||++-+.
T Consensus 82 ~~L~~KyDP~g~y~ 95 (112)
T 1k19_A 82 RELTAKYDPTGNWR 95 (112)
T ss_dssp HHHHHSSTTTCSSH
T ss_pred HHHHHHHCCCchHH
Confidence 35789999999875
No 35
>2dt7_A Splicing factor 3A subunit 3; structure genomics, SF3A120, SF3A60, SURP domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.57 E-value=42 Score=20.39 Aligned_cols=14 Identities=21% Similarity=0.356 Sum_probs=10.9
Q ss_pred hhcHHHHHHhHhcc
Q 042223 338 KNNFDRLVHVKTTV 351 (376)
Q Consensus 338 g~n~~rL~~iK~ky 351 (376)
.+=|+||++||.-+
T Consensus 13 ~~FY~rlk~Ike~H 26 (38)
T 2dt7_A 13 AEFYNRLKQIKEFH 26 (38)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 35699999999754
Done!