Query 042226
Match_columns 216
No_of_seqs 300 out of 1757
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 06:40:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042226.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042226hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fi2_A Oxalate oxidase, germin 100.0 5E-51 1.7E-55 338.3 21.7 194 22-216 1-197 (201)
2 3kgl_A Cruciferin; 11S SEED gl 100.0 4.5E-32 1.5E-36 248.9 14.5 145 66-215 297-443 (466)
3 3ksc_A LEGA class, prolegumin; 100.0 7.3E-31 2.5E-35 242.5 17.2 153 57-214 322-477 (496)
4 3qac_A 11S globulin SEED stora 100.0 3.3E-31 1.1E-35 243.2 13.5 147 64-215 295-443 (465)
5 2e9q_A 11S globulin subunit be 100.0 1.2E-30 4.2E-35 239.8 14.0 147 64-215 294-442 (459)
6 3fz3_A Prunin; TREE NUT allerg 100.0 3.1E-30 1.1E-34 238.6 13.2 154 57-215 358-514 (531)
7 2cav_A Protein (canavalin); vi 100.0 3.6E-29 1.2E-33 229.4 15.3 157 52-214 242-411 (445)
8 1uij_A Beta subunit of beta co 100.0 5.1E-29 1.7E-33 226.8 16.1 159 51-215 209-383 (416)
9 3c3v_A Arachin ARAH3 isoform; 100.0 6.9E-29 2.4E-33 230.1 16.7 147 64-215 344-492 (510)
10 1fxz_A Glycinin G1; proglycini 100.0 9.7E-29 3.3E-33 228.1 17.5 147 64-215 310-458 (476)
11 2d5f_A Glycinin A3B4 subunit; 100.0 7.9E-29 2.7E-33 229.5 13.6 146 64-215 339-484 (493)
12 2ea7_A 7S globulin-1; beta bar 100.0 2.4E-28 8.2E-33 223.4 15.4 158 51-214 226-398 (434)
13 3s7i_A Allergen ARA H 1, clone 99.9 1.6E-27 5.6E-32 216.8 13.4 154 55-214 226-407 (418)
14 1dgw_A Canavalin; duplicated s 99.9 2.2E-26 7.4E-31 187.1 14.7 149 56-214 3-166 (178)
15 2phl_A Phaseolin; plant SEED s 99.9 2.2E-25 7.4E-30 201.6 14.0 137 70-215 223-371 (397)
16 2vqa_A SLL1358 protein, MNCA; 99.9 7.8E-24 2.7E-28 187.9 16.8 158 49-215 194-351 (361)
17 2e9q_A 11S globulin subunit be 99.9 3.5E-24 1.2E-28 196.9 14.1 139 71-215 43-235 (459)
18 2ea7_A 7S globulin-1; beta bar 99.9 1.5E-23 5E-28 191.7 14.6 152 54-213 20-185 (434)
19 2cav_A Protein (canavalin); vi 99.9 3.2E-23 1.1E-27 190.0 16.3 153 54-214 46-211 (445)
20 1uij_A Beta subunit of beta co 99.9 1.7E-23 5.9E-28 190.4 13.3 152 54-213 8-173 (416)
21 1fxz_A Glycinin G1; proglycini 99.9 2.3E-23 7.7E-28 192.3 13.4 138 71-215 28-227 (476)
22 2phl_A Phaseolin; plant SEED s 99.9 2.5E-23 8.6E-28 188.1 13.1 152 54-213 11-181 (397)
23 3qac_A 11S globulin SEED stora 99.9 3.3E-23 1.1E-27 190.2 13.5 138 71-214 30-236 (465)
24 3ksc_A LEGA class, prolegumin; 99.9 1.1E-22 3.7E-27 188.0 14.1 137 71-213 26-214 (496)
25 3s7i_A Allergen ARA H 1, clone 99.9 2.3E-22 7.8E-27 182.9 15.0 135 70-213 19-168 (418)
26 2d5f_A Glycinin A3B4 subunit; 99.9 4.4E-22 1.5E-26 184.3 13.6 140 71-215 25-230 (493)
27 3kgl_A Cruciferin; 11S SEED gl 99.9 7.4E-22 2.5E-26 181.2 12.8 140 70-214 22-244 (466)
28 3c3v_A Arachin ARAH3 isoform; 99.9 2.5E-21 8.5E-26 179.5 13.5 139 71-214 28-268 (510)
29 2vqa_A SLL1358 protein, MNCA; 99.8 2.5E-20 8.5E-25 165.3 17.1 148 57-214 21-171 (361)
30 3fz3_A Prunin; TREE NUT allerg 99.8 1.9E-20 6.6E-25 173.3 13.5 140 70-214 27-296 (531)
31 1j58_A YVRK protein; cupin, de 99.8 5.7E-19 2E-23 158.0 17.2 153 53-215 222-374 (385)
32 1j58_A YVRK protein; cupin, de 99.8 7.2E-19 2.5E-23 157.4 12.9 147 57-214 48-196 (385)
33 1dgw_X Canavalin; duplicated s 99.8 6E-19 2.1E-23 125.4 5.4 74 58-132 3-76 (79)
34 3h8u_A Uncharacterized conserv 99.6 1.1E-14 3.9E-19 109.8 10.5 84 91-180 38-121 (125)
35 2xlg_A SLL1785 protein, CUCA; 99.5 2.5E-14 8.6E-19 121.2 10.4 117 52-172 7-137 (239)
36 3l2h_A Putative sugar phosphat 99.5 7.3E-14 2.5E-18 110.4 11.8 85 91-182 45-131 (162)
37 1lr5_A Auxin binding protein 1 99.5 1.2E-13 4E-18 109.4 12.0 116 91-211 40-158 (163)
38 2fqp_A Hypothetical protein BP 99.5 5.4E-14 1.8E-18 102.2 8.8 78 90-172 16-93 (97)
39 1v70_A Probable antibiotics sy 99.5 1.9E-13 6.6E-18 98.5 10.4 79 89-174 25-103 (105)
40 3ibm_A Cupin 2, conserved barr 99.5 9E-13 3.1E-17 105.5 15.0 117 50-175 12-132 (167)
41 2oa2_A BH2720 protein; 1017534 99.5 5.6E-13 1.9E-17 104.1 12.7 85 90-175 41-125 (148)
42 3i7d_A Sugar phosphate isomera 99.5 3.1E-13 1.1E-17 107.7 11.0 86 90-182 41-129 (163)
43 3lag_A Uncharacterized protein 99.5 5E-14 1.7E-18 103.5 5.1 79 89-171 14-92 (98)
44 3es1_A Cupin 2, conserved barr 99.5 3.1E-13 1.1E-17 109.2 10.2 80 90-177 77-156 (172)
45 3ht1_A REMF protein; cupin fol 99.4 7.4E-13 2.5E-17 101.7 11.1 84 90-181 37-122 (145)
46 2gu9_A Tetracenomycin polyketi 99.4 9.2E-13 3.1E-17 96.6 11.0 78 90-174 19-98 (113)
47 1x82_A Glucose-6-phosphate iso 99.4 2E-12 6.8E-17 105.6 14.0 83 91-175 66-156 (190)
48 3fjs_A Uncharacterized protein 99.4 6.7E-13 2.3E-17 99.5 8.7 76 89-172 33-108 (114)
49 3kgz_A Cupin 2 conserved barre 99.4 1.1E-12 3.7E-17 104.1 10.1 79 90-176 42-120 (156)
50 4e2g_A Cupin 2 conserved barre 99.4 1E-12 3.5E-17 99.0 9.3 77 90-175 39-115 (126)
51 2bnm_A Epoxidase; oxidoreducta 99.4 2.6E-12 8.9E-17 104.2 12.3 83 86-172 111-197 (198)
52 1o4t_A Putative oxalate decarb 99.4 2E-12 6.7E-17 99.3 10.2 77 89-172 54-130 (133)
53 3jzv_A Uncharacterized protein 99.4 1.5E-12 5.2E-17 104.3 9.9 78 90-175 51-128 (166)
54 2b8m_A Hypothetical protein MJ 99.4 2.3E-12 8E-17 96.1 10.1 74 91-172 26-100 (117)
55 2f4p_A Hypothetical protein TM 99.4 9.3E-12 3.2E-16 97.3 13.5 98 89-201 45-143 (147)
56 2ozi_A Hypothetical protein RP 99.4 6.2E-13 2.1E-17 97.8 6.0 78 91-172 16-93 (98)
57 4i4a_A Similar to unknown prot 99.3 8.2E-12 2.8E-16 94.2 11.4 76 90-173 32-107 (128)
58 2pfw_A Cupin 2, conserved barr 99.3 4.3E-12 1.5E-16 94.1 9.7 76 91-176 33-108 (116)
59 1vj2_A Novel manganese-contain 99.3 2.4E-12 8.3E-17 97.7 8.3 77 89-173 45-121 (126)
60 2o8q_A Hypothetical protein; c 99.3 5.7E-12 1.9E-16 96.1 9.5 78 92-176 43-120 (134)
61 3cew_A Uncharacterized cupin p 99.3 6.4E-12 2.2E-16 94.8 9.5 80 89-175 23-103 (125)
62 1yhf_A Hypothetical protein SP 99.3 1.2E-11 4.2E-16 91.5 10.3 74 90-173 38-111 (115)
63 1y9q_A Transcriptional regulat 99.3 9.7E-12 3.3E-16 100.6 10.3 77 88-173 100-178 (192)
64 2vpv_A Protein MIF2, MIF2P; nu 99.3 8.4E-12 2.9E-16 100.1 9.7 74 92-172 88-162 (166)
65 1rc6_A Hypothetical protein YL 99.3 9.7E-12 3.3E-16 105.8 9.7 78 89-173 176-254 (261)
66 3h7j_A Bacilysin biosynthesis 99.3 1.3E-11 4.3E-16 104.1 9.8 78 92-177 145-223 (243)
67 2q30_A Uncharacterized protein 99.2 3.5E-11 1.2E-15 87.9 9.6 76 90-173 31-107 (110)
68 2ozj_A Cupin 2, conserved barr 99.2 5.6E-11 1.9E-15 88.1 10.0 72 92-173 38-109 (114)
69 1sef_A Conserved hypothetical 99.2 9E-11 3.1E-15 100.6 12.4 90 72-173 166-257 (274)
70 1y3t_A Hypothetical protein YX 99.2 7.5E-11 2.6E-15 102.7 10.8 78 90-175 44-121 (337)
71 3lwc_A Uncharacterized protein 99.2 1E-10 3.5E-15 88.6 8.7 74 90-173 38-111 (119)
72 1sq4_A GLXB, glyoxylate-induce 99.2 1.1E-10 3.7E-15 100.6 9.9 76 90-173 66-143 (278)
73 3h7j_A Bacilysin biosynthesis 99.2 8.3E-11 2.8E-15 99.1 9.0 73 93-173 35-108 (243)
74 1sfn_A Conserved hypothetical 99.2 2.8E-10 9.6E-15 96.1 12.2 77 89-173 162-239 (246)
75 2d40_A Z3393, putative gentisa 99.1 8.2E-11 2.8E-15 104.7 8.6 77 90-173 98-174 (354)
76 1juh_A Quercetin 2,3-dioxygena 99.1 3.9E-10 1.3E-14 100.0 12.7 80 92-175 48-130 (350)
77 2i45_A Hypothetical protein; n 99.1 1.2E-10 4.1E-15 85.4 7.7 69 94-171 30-98 (107)
78 2d40_A Z3393, putative gentisa 99.1 2.4E-10 8.1E-15 101.7 11.1 89 72-172 249-338 (354)
79 2opk_A Hypothetical protein; p 99.1 3.6E-10 1.2E-14 84.3 10.3 75 90-173 29-109 (112)
80 1rc6_A Hypothetical protein YL 99.1 1.6E-10 5.4E-15 98.2 9.2 77 90-173 57-134 (261)
81 1y3t_A Hypothetical protein YX 99.1 5.7E-10 2E-14 97.1 13.0 75 94-176 219-294 (337)
82 4e2q_A Ureidoglycine aminohydr 99.1 4.8E-10 1.6E-14 96.2 11.3 107 48-173 36-142 (266)
83 2pyt_A Ethanolamine utilizatio 99.1 2.1E-10 7.3E-15 88.6 7.6 71 91-173 56-126 (133)
84 3d82_A Cupin 2, conserved barr 99.1 3.5E-10 1.2E-14 81.4 8.3 70 88-170 29-98 (102)
85 3rns_A Cupin 2 conserved barre 99.1 3.4E-10 1.2E-14 94.4 9.1 73 91-172 152-224 (227)
86 4b29_A Dimethylsulfoniopropion 99.1 4.3E-10 1.5E-14 93.4 9.6 78 88-173 128-205 (217)
87 4h7l_A Uncharacterized protein 99.1 8.7E-10 3E-14 87.5 10.9 71 92-175 47-119 (157)
88 4e2q_A Ureidoglycine aminohydr 99.1 1.2E-09 4.2E-14 93.6 12.5 87 73-171 171-258 (266)
89 1sef_A Conserved hypothetical 99.1 3.7E-10 1.3E-14 96.7 9.2 77 90-173 60-137 (274)
90 3bu7_A Gentisate 1,2-dioxygena 99.1 8.3E-10 2.8E-14 99.6 11.5 78 89-173 120-198 (394)
91 3nw4_A Gentisate 1,2-dioxygena 99.1 4.2E-10 1.4E-14 100.6 9.0 78 89-173 100-177 (368)
92 1sq4_A GLXB, glyoxylate-induce 99.0 1.1E-09 3.8E-14 94.3 11.1 82 84-173 183-265 (278)
93 3bu7_A Gentisate 1,2-dioxygena 99.0 2.5E-09 8.5E-14 96.4 13.6 92 73-173 276-368 (394)
94 3rns_A Cupin 2 conserved barre 99.0 1E-09 3.6E-14 91.4 10.3 73 91-173 36-108 (227)
95 4axo_A EUTQ, ethanolamine util 99.0 1.6E-09 5.4E-14 85.6 8.3 73 91-175 65-137 (151)
96 1vr3_A Acireductone dioxygenas 98.9 1.3E-08 4.3E-13 83.3 12.5 84 93-180 75-168 (191)
97 1o5u_A Novel thermotoga mariti 98.9 4.6E-09 1.6E-13 77.3 6.7 64 96-168 35-98 (101)
98 1dgw_Y Canavalin; duplicated s 98.8 3E-08 1E-12 72.0 10.3 72 138-214 6-81 (93)
99 3ebr_A Uncharacterized RMLC-li 98.8 1.4E-08 4.9E-13 80.7 8.9 87 72-173 27-115 (159)
100 2q1z_B Anti-sigma factor CHRR, 98.8 1.2E-08 4E-13 83.6 8.4 70 92-173 125-194 (195)
101 1yfu_A 3-hydroxyanthranilate-3 98.8 4.4E-08 1.5E-12 78.5 11.3 69 89-162 33-101 (174)
102 1sfn_A Conserved hypothetical 98.8 1.4E-08 4.9E-13 85.6 9.0 72 90-173 48-119 (246)
103 3bcw_A Uncharacterized protein 98.8 1.2E-08 4.1E-13 77.8 6.4 73 91-172 48-120 (123)
104 2o1q_A Putative acetyl/propion 98.7 8.6E-09 3E-13 80.5 4.7 91 72-175 29-120 (145)
105 1zrr_A E-2/E-2' protein; nicke 98.7 9.7E-09 3.3E-13 83.2 4.1 70 105-179 93-162 (179)
106 3cjx_A Protein of unknown func 98.7 5.6E-08 1.9E-12 77.7 7.7 74 91-173 42-117 (165)
107 1juh_A Quercetin 2,3-dioxygena 98.7 1.4E-07 4.6E-12 83.6 10.9 79 87-173 244-325 (350)
108 3eqe_A Putative cystein deoxyg 98.6 6.6E-07 2.2E-11 71.9 13.7 87 91-178 68-157 (171)
109 2y0o_A Probable D-lyxose ketol 98.6 1.1E-07 3.7E-12 76.7 9.0 82 92-175 53-154 (175)
110 3nw4_A Gentisate 1,2-dioxygena 98.5 6.5E-07 2.2E-11 79.9 12.0 88 73-172 260-349 (368)
111 1zvf_A 3-hydroxyanthranilate 3 98.5 4.2E-07 1.4E-11 72.8 9.2 62 99-161 41-103 (176)
112 2gm6_A Cysteine dioxygenase ty 98.5 1.7E-06 5.8E-11 71.5 13.0 83 91-174 78-167 (208)
113 3st7_A Capsular polysaccharide 98.5 5.1E-07 1.8E-11 79.0 10.3 78 93-173 273-354 (369)
114 3d0j_A Uncharacterized protein 98.5 3.7E-07 1.3E-11 70.7 8.0 80 92-173 25-109 (140)
115 2arc_A ARAC, arabinose operon 98.4 2.3E-06 7.9E-11 65.9 10.5 59 106-172 32-91 (164)
116 3o14_A Anti-ecfsigma factor, C 98.4 1.4E-06 4.7E-11 72.8 9.6 85 72-174 27-111 (223)
117 2qnk_A 3-hydroxyanthranilate 3 98.4 2E-06 6.9E-11 73.7 10.3 72 100-177 39-110 (286)
118 3bal_A Acetylacetone-cleaving 98.4 5E-07 1.7E-11 71.3 6.0 90 72-173 31-120 (153)
119 3eln_A Cysteine dioxygenase ty 98.3 1.4E-05 4.8E-10 65.6 13.8 87 92-178 70-163 (200)
120 2pa7_A DTDP-6-deoxy-3,4-keto-h 98.0 7.9E-05 2.7E-09 57.9 11.9 94 73-172 17-112 (141)
121 3uss_A Putative uncharacterize 98.0 0.00016 5.4E-09 59.8 13.7 85 91-176 72-163 (211)
122 3myx_A Uncharacterized protein 97.9 6.8E-05 2.3E-09 63.1 10.3 81 91-182 46-130 (238)
123 3ejk_A DTDP sugar isomerase; Y 97.9 0.00017 5.7E-09 57.9 11.4 75 99-173 60-141 (174)
124 3es4_A Uncharacterized protein 97.8 0.00012 4.2E-09 55.0 9.1 64 92-163 42-105 (116)
125 3myx_A Uncharacterized protein 97.6 0.00041 1.4E-08 58.3 9.7 64 91-162 166-229 (238)
126 1yud_A Hypothetical protein SO 97.5 0.0027 9.3E-08 50.6 13.1 132 70-213 26-165 (170)
127 3gbg_A TCP pilus virulence reg 97.3 0.00079 2.7E-08 56.3 8.9 75 91-171 6-84 (276)
128 3o14_A Anti-ecfsigma factor, C 97.2 0.0013 4.4E-08 54.6 8.6 78 72-170 133-210 (223)
129 2vec_A YHAK, pirin-like protei 97.2 0.0019 6.4E-08 54.8 9.7 73 94-172 66-141 (256)
130 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 97.1 0.0054 1.9E-07 49.5 10.8 72 100-172 56-135 (185)
131 2ixk_A DTDP-4-dehydrorhamnose 97.0 0.0072 2.5E-07 48.7 10.5 72 100-172 57-136 (184)
132 3kmh_A D-lyxose isomerase; cup 96.9 0.0028 9.6E-08 53.0 8.0 80 92-171 106-206 (246)
133 1vrb_A Putative asparaginyl hy 96.9 0.0091 3.1E-07 52.4 11.3 74 97-171 145-251 (342)
134 1tq5_A Protein YHHW; bicupin, 96.9 0.0066 2.3E-07 50.9 9.9 73 94-172 43-118 (242)
135 3ryk_A DTDP-4-dehydrorhamnose 96.8 0.0088 3E-07 49.1 9.9 70 100-170 78-156 (205)
136 4gjz_A Lysine-specific demethy 96.7 0.0039 1.3E-07 50.5 7.4 67 96-163 127-226 (235)
137 1dzr_A DTDP-4-dehydrorhamnose 96.7 0.016 5.5E-07 46.6 10.9 71 100-171 55-134 (183)
138 3bb6_A Uncharacterized protein 96.7 0.011 3.7E-07 44.9 9.3 68 100-169 22-95 (127)
139 1wlt_A 176AA long hypothetical 96.7 0.017 5.8E-07 47.0 10.8 71 100-171 73-152 (196)
140 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 96.6 0.012 4.1E-07 48.0 9.3 71 100-172 68-142 (197)
141 1oi6_A PCZA361.16; epimerase, 96.5 0.03 1E-06 45.8 11.1 72 100-172 55-135 (205)
142 3d8c_A Hypoxia-inducible facto 96.4 0.015 5.1E-07 51.2 9.4 75 97-172 187-296 (349)
143 2c0z_A NOVW; isomerase, epimer 96.4 0.031 1.1E-06 46.1 10.4 70 100-170 63-141 (216)
144 1upi_A DTDP-4-dehydrorhamnose 96.3 0.047 1.6E-06 45.3 11.2 70 100-170 74-152 (225)
145 4hn1_A Putative 3-epimerase in 96.2 0.059 2E-06 44.0 11.1 72 100-171 52-132 (201)
146 2qdr_A Uncharacterized protein 96.0 0.081 2.8E-06 44.9 11.1 86 70-173 75-161 (303)
147 3al5_A HTYW5, JMJC domain-cont 95.8 0.031 1E-06 48.8 8.5 72 97-171 171-271 (338)
148 2p17_A Pirin-like protein; GK1 95.6 0.099 3.4E-06 44.5 10.4 71 94-172 42-115 (277)
149 2xdv_A MYC-induced nuclear ant 95.5 0.059 2E-06 48.9 9.4 65 97-162 143-223 (442)
150 4diq_A Lysine-specific demethy 95.3 0.15 5.1E-06 46.9 11.3 74 97-171 168-261 (489)
151 1e5r_A Proline oxidase; oxidor 95.0 0.032 1.1E-06 48.0 5.7 74 92-169 91-172 (290)
152 2yu1_A JMJC domain-containing 95.0 0.041 1.4E-06 50.2 6.5 77 100-176 204-304 (451)
153 3k2o_A Bifunctional arginine d 94.8 0.12 4E-06 45.3 8.7 67 97-163 176-281 (336)
154 1j1l_A Pirin; beta sandwich, c 94.7 0.2 6.8E-06 43.0 9.9 84 93-183 41-135 (290)
155 3kv5_D JMJC domain-containing 94.5 0.062 2.1E-06 49.5 6.6 64 100-163 274-361 (488)
156 1eyb_A Homogentisate 1,2-dioxy 94.4 0.16 5.5E-06 46.3 8.9 57 106-171 171-227 (471)
157 2qjv_A Uncharacterized IOLB-li 94.4 0.35 1.2E-05 41.1 10.4 81 92-175 153-248 (270)
158 3kv4_A PHD finger protein 8; e 94.3 0.13 4.6E-06 46.7 8.2 65 100-164 239-327 (447)
159 2qnk_A 3-hydroxyanthranilate 3 94.3 0.12 4.2E-06 44.1 7.5 61 99-171 214-275 (286)
160 3k3o_A PHF8, PHD finger protei 93.9 0.1 3.5E-06 46.4 6.5 64 100-163 155-242 (371)
161 1xru_A 4-deoxy-L-threo-5-hexos 93.7 0.81 2.8E-05 39.1 11.3 80 91-175 179-265 (282)
162 2oyz_A UPF0345 protein VPA0057 93.4 0.4 1.4E-05 34.3 7.6 64 98-171 29-92 (94)
163 3kv9_A JMJC domain-containing 93.3 0.095 3.3E-06 47.0 5.2 64 100-163 183-270 (397)
164 3rcq_A Aspartyl/asparaginyl be 93.2 0.31 1.1E-05 39.5 7.8 88 82-177 91-184 (197)
165 3pua_A GRC5, PHD finger protei 92.7 0.21 7.3E-06 44.6 6.6 64 100-163 182-269 (392)
166 3pur_A Lysine-specific demethy 91.9 0.21 7.1E-06 46.3 5.6 64 100-163 304-391 (528)
167 3hqx_A UPF0345 protein aciad03 91.8 0.84 2.9E-05 33.6 7.7 67 98-172 43-109 (111)
168 1ywk_A 4-deoxy-L-threo-5-hexos 91.7 0.96 3.3E-05 38.7 9.2 81 91-176 179-266 (289)
169 2rg4_A Uncharacterized protein 91.4 0.52 1.8E-05 38.4 7.1 79 93-173 104-204 (216)
170 3dl3_A Tellurite resistance pr 91.0 1.3 4.6E-05 32.9 8.3 57 104-160 28-86 (119)
171 1pmi_A PMI, phosphomannose iso 90.7 0.91 3.1E-05 41.1 8.6 76 91-172 356-437 (440)
172 3loi_A Putative uncharacterize 88.2 8.1 0.00028 30.4 14.9 129 70-213 24-168 (172)
173 1qwr_A Mannose-6-phosphate iso 88.1 1.5 5.1E-05 37.9 7.6 56 92-157 251-306 (319)
174 1tq5_A Protein YHHW; bicupin, 87.6 5 0.00017 33.2 10.3 70 90-172 158-227 (242)
175 2wfp_A Mannose-6-phosphate iso 87.4 0.65 2.2E-05 41.4 5.0 56 91-156 323-378 (394)
176 3eo6_A Protein of unknown func 86.7 1.1 3.6E-05 32.8 4.9 55 98-160 42-96 (106)
177 3m3i_A Putative uncharacterize 86.5 12 0.00042 30.7 14.0 132 70-213 33-210 (225)
178 2pqq_A Putative transcriptiona 85.3 2.4 8.1E-05 30.5 6.5 53 94-148 28-80 (149)
179 1zx5_A Mannosephosphate isomer 84.9 3.8 0.00013 35.0 8.4 57 91-159 229-286 (300)
180 2vec_A YHAK, pirin-like protei 83.8 7.6 0.00026 32.4 9.7 72 90-170 180-251 (256)
181 3mdp_A Cyclic nucleotide-bindi 83.5 2.4 8.3E-05 30.2 5.8 54 94-149 29-85 (142)
182 2ypd_A Probable JMJC domain-co 83.5 1.1 3.7E-05 40.0 4.4 41 136-176 291-331 (392)
183 1j1l_A Pirin; beta sandwich, c 82.9 10 0.00036 32.1 10.3 79 89-174 166-244 (290)
184 3dn7_A Cyclic nucleotide bindi 81.5 4.8 0.00017 30.5 7.2 53 95-149 31-83 (194)
185 2p17_A Pirin-like protein; GK1 81.2 7.7 0.00026 32.7 8.8 73 90-173 165-242 (277)
186 2oz6_A Virulence factor regula 81.2 5 0.00017 30.7 7.2 53 95-149 14-66 (207)
187 4ev0_A Transcription regulator 80.8 4.7 0.00016 31.0 6.9 53 95-149 23-75 (216)
188 1zx5_A Mannosephosphate isomer 80.5 1.2 4.2E-05 38.1 3.6 46 113-158 117-178 (300)
189 3fx3_A Cyclic nucleotide-bindi 80.2 5.3 0.00018 31.4 7.1 52 95-148 35-86 (237)
190 2z69_A DNR protein; beta barre 79.8 2.2 7.7E-05 30.9 4.5 53 94-148 35-87 (154)
191 3ryp_A Catabolite gene activat 79.8 6 0.0002 30.3 7.2 53 95-149 20-72 (210)
192 3idb_B CAMP-dependent protein 79.5 6 0.00021 29.1 6.9 52 94-148 61-112 (161)
193 3iwz_A CAP-like, catabolite ac 79.5 5.7 0.00019 30.9 7.1 53 95-149 35-87 (230)
194 3d0s_A Transcriptional regulat 79.2 6.4 0.00022 30.7 7.3 53 95-149 30-82 (227)
195 1qwr_A Mannose-6-phosphate iso 78.9 1.5 5E-05 37.9 3.6 46 113-158 117-178 (319)
196 3e97_A Transcriptional regulat 78.6 5.6 0.00019 31.1 6.8 54 94-149 29-82 (231)
197 3gyd_A CNMP-BD protein, cyclic 78.1 5.7 0.00019 30.4 6.6 53 94-148 62-114 (187)
198 1zyb_A Transcription regulator 77.5 5 0.00017 31.7 6.2 53 94-148 43-95 (232)
199 3b02_A Transcriptional regulat 77.2 5.5 0.00019 30.4 6.3 50 98-149 3-52 (195)
200 2gau_A Transcriptional regulat 77.2 4.7 0.00016 31.6 6.0 53 94-148 33-85 (232)
201 3la7_A Global nitrogen regulat 76.3 7.5 0.00026 30.9 7.0 55 93-149 42-96 (243)
202 3kcc_A Catabolite gene activat 76.0 8.1 0.00028 31.1 7.2 54 94-149 69-122 (260)
203 1xsq_A Ureidoglycolate hydrola 76.0 5.8 0.0002 31.1 6.0 69 104-172 68-140 (168)
204 1o5l_A Transcriptional regulat 75.7 6.2 0.00021 30.6 6.3 53 94-148 22-74 (213)
205 2bdr_A Ureidoglycolate hydrola 75.0 8.2 0.00028 30.4 6.7 69 104-172 70-142 (175)
206 2qjv_A Uncharacterized IOLB-li 74.4 34 0.0011 28.8 10.7 70 92-172 29-109 (270)
207 2fmy_A COOA, carbon monoxide o 74.4 10 0.00035 29.3 7.2 70 95-171 28-97 (220)
208 3dv8_A Transcriptional regulat 73.8 8.4 0.00029 29.6 6.6 52 95-148 27-78 (220)
209 2wfp_A Mannose-6-phosphate iso 73.3 2.7 9.4E-05 37.3 3.9 23 137-159 239-261 (394)
210 1znp_A Hypothetical protein AT 73.1 30 0.001 26.7 12.5 97 70-171 19-122 (154)
211 2zcw_A TTHA1359, transcription 72.9 7.4 0.00025 29.8 6.0 52 96-149 7-60 (202)
212 3e6c_C CPRK, cyclic nucleotide 72.4 9.6 0.00033 30.3 6.8 54 94-149 32-85 (250)
213 1ft9_A Carbon monoxide oxidati 72.2 19 0.00066 27.8 8.4 70 94-170 23-92 (222)
214 2qcs_B CAMP-dependent protein 71.4 12 0.0004 30.3 7.2 54 94-148 180-233 (291)
215 4f8a_A Potassium voltage-gated 69.3 14 0.00048 26.7 6.6 49 95-150 51-99 (160)
216 2ptm_A Hyperpolarization-activ 68.5 12 0.0004 28.6 6.2 49 94-148 94-142 (198)
217 3pna_A CAMP-dependent protein 65.9 19 0.00066 26.0 6.8 48 94-148 61-108 (154)
218 2bgc_A PRFA; bacterial infecti 65.5 15 0.00052 28.9 6.5 72 96-171 20-98 (238)
219 1ywk_A 4-deoxy-L-threo-5-hexos 64.5 19 0.00063 30.7 7.0 68 97-171 62-132 (289)
220 3ocp_A PRKG1 protein; serine/t 64.4 22 0.00077 25.0 6.8 48 94-148 46-93 (139)
221 3bpz_A Potassium/sodium hyperp 64.2 8.5 0.00029 29.6 4.6 48 94-148 95-142 (202)
222 4ava_A Lysine acetyltransferas 63.7 15 0.00051 30.5 6.4 52 94-148 36-87 (333)
223 1pmi_A PMI, phosphomannose iso 63.2 5.8 0.0002 35.8 3.9 22 139-160 267-288 (440)
224 2xxz_A Lysine-specific demethy 61.0 9.1 0.00031 33.3 4.6 33 137-169 278-310 (332)
225 3shr_A CGMP-dependent protein 60.2 19 0.00066 29.2 6.4 53 94-148 180-233 (299)
226 3dkw_A DNR protein; CRP-FNR, H 59.1 4.6 0.00016 31.4 2.2 54 95-150 33-86 (227)
227 3ukn_A Novel protein similar t 57.6 18 0.00061 27.9 5.5 49 94-149 98-146 (212)
228 3tnp_B CAMP-dependent protein 57.1 28 0.00097 30.4 7.3 52 94-148 168-219 (416)
229 3g7d_A PHPD; non heme Fe(II) d 57.0 1E+02 0.0035 27.1 13.1 43 114-159 355-397 (443)
230 1o7f_A CAMP-dependent RAP1 gua 52.0 30 0.001 30.1 6.6 56 94-150 65-121 (469)
231 3of1_A CAMP-dependent protein 51.9 17 0.00059 28.2 4.6 47 95-148 31-77 (246)
232 2d93_A RAP guanine nucleotide 51.0 17 0.00057 25.6 4.0 48 94-148 39-87 (134)
233 1vp6_A CNBD, cyclic-nucleotide 49.8 18 0.00062 25.4 4.0 45 95-148 35-79 (138)
234 2qcs_B CAMP-dependent protein 49.4 40 0.0014 27.0 6.6 48 94-148 62-109 (291)
235 1xe7_A YML079WP, hypothetical 46.7 1.1E+02 0.0038 24.5 12.9 109 92-213 79-198 (203)
236 4ask_A Lysine-specific demethy 44.9 22 0.00077 32.6 4.6 81 82-166 229-341 (510)
237 4din_B CAMP-dependent protein 44.8 34 0.0012 29.3 5.7 51 97-148 274-324 (381)
238 1s4c_A Protein HI0227; double- 44.3 70 0.0024 24.0 6.8 56 105-160 60-134 (155)
239 3shr_A CGMP-dependent protein 44.0 42 0.0015 27.1 5.9 48 94-148 62-109 (299)
240 3of1_A CAMP-dependent protein 43.5 38 0.0013 26.1 5.4 49 94-148 148-196 (246)
241 3avr_A Lysine-specific demethy 43.3 36 0.0012 31.4 5.7 33 137-169 337-369 (531)
242 1wgp_A Probable cyclic nucleot 42.9 6.8 0.00023 27.7 0.7 49 97-148 32-82 (137)
243 1xru_A 4-deoxy-L-threo-5-hexos 39.1 46 0.0016 28.1 5.4 52 113-171 78-132 (282)
244 3tnp_B CAMP-dependent protein 33.3 61 0.0021 28.2 5.5 54 94-148 290-348 (416)
245 2qdr_A Uncharacterized protein 31.7 1E+02 0.0035 26.0 6.2 66 91-176 216-289 (303)
246 1yll_A PA5104, conserved hypot 31.3 97 0.0033 24.6 5.9 88 53-153 87-174 (200)
247 4f7z_A RAP guanine nucleotide 29.7 1.1E+02 0.0036 29.9 7.0 56 93-149 64-120 (999)
248 4din_B CAMP-dependent protein 27.9 55 0.0019 28.0 4.2 48 94-148 153-200 (381)
249 1o7f_A CAMP-dependent RAP1 gua 27.5 99 0.0034 26.7 5.9 46 97-148 364-409 (469)
250 2opw_A Phyhd1 protein; double- 25.2 85 0.0029 25.5 4.7 28 136-163 226-254 (291)
251 2dkz_A Hypothetical protein LO 24.3 48 0.0016 22.9 2.4 29 183-214 46-74 (84)
252 3nnf_A CURA; non-HAEM Fe(II)/a 22.2 94 0.0032 26.9 4.4 22 138-159 234-255 (344)
253 3dkq_A PKHD-type hydroxylase S 21.6 1.1E+02 0.0038 25.0 4.6 63 94-161 101-181 (243)
254 1iyc_A Scarabaecin; antifungal 20.7 18 0.0006 20.3 -0.3 10 40-49 23-32 (36)
255 1tc3_C Protein (TC3 transposas 20.2 1.1E+02 0.0036 16.8 3.2 23 193-215 22-44 (51)
No 1
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=100.00 E-value=5e-51 Score=338.26 Aligned_cols=194 Identities=49% Similarity=0.856 Sum_probs=182.4
Q ss_pred cCCCCCcceeeeCCCCC-ceecCcccCCCccccCCcccccc-cCCCCCccCCCCceEEEeeccCCCCCccCceEEEEEEE
Q 042226 22 FEPSPLQDFCVADPSGS-VRVNGFACMDPKLAQASHFSFSG-LHVAGNTENPLGSRVTPVTVAQIPGLNTLGVSLARIDY 99 (216)
Q Consensus 22 ~d~~~~~dfcv~~~~~~-~~~~g~~ck~~~~~~~~dF~~~~-~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gvs~~~~~l 99 (216)
+||||||||||||++++ +++|||+|| |+.++++||+|++ +.+++++.|..|+.++.++..++|+++++++++.++++
T Consensus 1 ~~~~~~~d~c~~~~~~~~~~~~g~~c~-~~~~~~~df~~~~~~~~~~~~~~~~G~~v~~~~~~~~p~l~~~~~~~~~~~l 79 (201)
T 1fi2_A 1 TDPDPLQDFCVADLDGKAVSVNGHTCK-PMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDF 79 (201)
T ss_dssp CCCCCSSSCCCBCCCTTSCCCSSCCBC-CGGGCCSCTTCCCTTSSCCCCCSTTSEEEEEESTTTCGGGTTSSCEEEEEEE
T ss_pred CCCcccceeEEecCCCCcccccCcccc-cCcccccceEEeeeecCCCCccCCCCcEEEEEecccCCCcccCceEEEEEEE
Confidence 59999999999999998 999999999 9999999999999 99999888899999999999999999999999999999
Q ss_pred cCCcccCCccCCCccEEEEEEeCeEEEEEEecCC-CCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEEEeCCCCc
Q 042226 100 APWGVVPPHVHPRATEILTVIEGSLEVGFVTSNP-ENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISALSSQNPG 178 (216)
Q Consensus 100 ~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~-~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg 178 (216)
+||+..++|||++++|++||++|++++++.+.++ +++++++.|++||+++||+|.+|++.|.|++++++++++++++|+
T Consensus 80 ~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~~~p~ 159 (201)
T 1fi2_A 80 APGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPG 159 (201)
T ss_dssp CTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESSSCCC
T ss_pred CCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCCC
Confidence 9999999999998899999999999999975310 045568899999999999999999999999999999999999999
Q ss_pred eeEeehhhhcCCCCCCHHHHHHHcCCCHHHHHHHhhcC
Q 042226 179 VITIANAVFGSNPAIAADILAKAFQVDKSVVDQLQTKF 216 (216)
Q Consensus 179 ~~~~~~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~~~ 216 (216)
.+.++.++|+.+|++++++|+++|++++++|++||++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~vl~~af~~~~~~v~~l~~~~ 197 (201)
T 1fi2_A 160 IVFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKSKF 197 (201)
T ss_dssp CEEHHHHHHHCSSCCCHHHHHHHHTSCHHHHHHHHHHS
T ss_pred eEehhhHHhcCCCCCCHHHHHHHHCcCHHHHHHHHHhh
Confidence 99999999999999999999999999999999999876
No 2
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.97 E-value=4.5e-32 Score=248.94 Aligned_cols=145 Identities=17% Similarity=0.282 Sum_probs=135.4
Q ss_pred CCccCCCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCC
Q 042226 66 GNTENPLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKG 145 (216)
Q Consensus 66 ~~~~~~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~G 145 (216)
.++.++.|++++.+++.+||+|++++|++++++|.||++++|||||+++||+||++|+++++++++++ ++++.++|++|
T Consensus 297 ~d~~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g-~~~f~~~l~~G 375 (466)
T 3kgl_A 297 ADVYKPQLGYISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNG-DRVFDGQVSQG 375 (466)
T ss_dssp EEEEETTTEEEEEECTTTCTTHHHHTCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTS-CEEEEEEEETT
T ss_pred CCcccCCCceEEEechhhCcccccCceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCC-cEEEEeEecCC
Confidence 34446789999999999999999999999999999999999999999999999999999999998763 67789999999
Q ss_pred cEEEEcCCCeEEEEECCCCcEEEEEEEeCCCCceeEee--hhhhcCCCCCCHHHHHHHcCCCHHHHHHHhhc
Q 042226 146 DVFVFPIGLVHFQRNVGHGNAFSISALSSQNPGVITIA--NAVFGSNPAIAADILAKAFQVDKSVVDQLQTK 215 (216)
Q Consensus 146 Dv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~~ 215 (216)
|+++||+|.+|++ |.|++++.+++++++++|+.+.++ .++|++ +|++||+++|+++.+++++||++
T Consensus 376 DV~v~P~G~~H~~-~ag~e~~~~l~~f~s~np~~~~LaG~~s~~~~---lP~eVla~aF~v~~~~v~~Lk~~ 443 (466)
T 3kgl_A 376 QLLSIPQGFSVVK-RATSEQFRWIEFKTNANAQINTLAGRTSVLRG---LPLEVISNGYQISLEEARRVKFN 443 (466)
T ss_dssp CEEEECTTCEEEE-EECSSEEEEEEEESSSSCCEEESSSTTCTGGG---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred cEEEECCCCeEEE-EcCCCCEEEEEEECCCCCccccccchhhhhhh---CCHHHHHHHhCcCHHHHHHHHhc
Confidence 9999999999998 789999999999999999999998 688998 99999999999999999999874
No 3
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.97 E-value=7.3e-31 Score=242.50 Aligned_cols=153 Identities=18% Similarity=0.295 Sum_probs=137.7
Q ss_pred ccccccC-CCCCccCCCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCC
Q 042226 57 FSFSGLH-VAGNTENPLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPEN 135 (216)
Q Consensus 57 F~~~~~~-~~~~~~~~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~ 135 (216)
+.|+..+ ...++.++.|++++.+++.+||+|+++||++++++|.||++.+|||||+++||+||++|+++++++++++ +
T Consensus 322 l~~Ni~~p~~~di~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g-~ 400 (496)
T 3ksc_A 322 LRLNIGPSSSPDIYNPEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNG-N 400 (496)
T ss_dssp CEEECSTTSCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTS-C
T ss_pred hhccccccccCCcccCCCeeEEEeCHHHCccccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCC-c
Confidence 4555442 3345557789999999999999999999999999999999999999999999999999999999998763 6
Q ss_pred ceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEEEeCCCCceeEee--hhhhcCCCCCCHHHHHHHcCCCHHHHHHHh
Q 042226 136 RLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISALSSQNPGVITIA--NAVFGSNPAIAADILAKAFQVDKSVVDQLQ 213 (216)
Q Consensus 136 ~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~lf~~~p~~p~~vl~~af~~~~~~v~~l~ 213 (216)
+++.++|++||+++||+|.+|++.|. ++++.+++++++++|+.+.++ .++|+. +|++||+++|+++.+++++|+
T Consensus 401 ~~f~~~l~~GDV~v~P~G~~H~~~a~-~e~~~~l~f~~s~np~~~~LaG~~sv~~~---~p~eVLa~aF~v~~~~v~~Lk 476 (496)
T 3ksc_A 401 TVFDGELEAGRALTVPQNYAVAAKSL-SDRFSYVAFKTNDRAGIARLAGTSSVINN---LPLDVVAATFNLQRNEARQLK 476 (496)
T ss_dssp EEEEEEEETTCEEEECTTCEEEEEEC-SSEEEEEEEESSTTCCEEESSSTTCTTTT---SCHHHHHHHHTCCHHHHHHHH
T ss_pred EEEEEEecCCeEEEECCCCEEEEEeC-CCCEEEEEEECCCCCccccccchhhhhhh---CCHHHHHHHHCcCHHHHHHHH
Confidence 77888999999999999999998775 788999999999999999997 788987 999999999999999999998
Q ss_pred h
Q 042226 214 T 214 (216)
Q Consensus 214 ~ 214 (216)
+
T Consensus 477 ~ 477 (496)
T 3ksc_A 477 S 477 (496)
T ss_dssp H
T ss_pred h
Confidence 7
No 4
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.97 E-value=3.3e-31 Score=243.16 Aligned_cols=147 Identities=18% Similarity=0.264 Sum_probs=136.4
Q ss_pred CCCCccCCCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEec
Q 042226 64 VAGNTENPLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQ 143 (216)
Q Consensus 64 ~~~~~~~~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~ 143 (216)
..+++.++.|++++.+++.+||+|+++||++++++|.||++.+|||||+++||+||++|+++++++++++ ++++.++|+
T Consensus 295 ~~~dv~~~~gG~v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g-~~~f~~~l~ 373 (465)
T 3qac_A 295 SKADVYTPEAGRLTTVNSFNLPILRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQG-QSVFDEELS 373 (465)
T ss_dssp TTCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS-CEEEEEEEE
T ss_pred ccCCcccCCCceEEEeCHHHCCCccccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCC-cEEEEEEec
Confidence 4455567889999999999999999999999999999999999999999999999999999999998763 678889999
Q ss_pred CCcEEEEcCCCeEEEEECCCCcEEEEEEEeCCCCceeEee--hhhhcCCCCCCHHHHHHHcCCCHHHHHHHhhc
Q 042226 144 KGDVFVFPIGLVHFQRNVGHGNAFSISALSSQNPGVITIA--NAVFGSNPAIAADILAKAFQVDKSVVDQLQTK 215 (216)
Q Consensus 144 ~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~~ 215 (216)
+||+++||+|.+|++. .|++++.+++++++++|+.+.++ .++|+. +|++||+++|++|.+++++||++
T Consensus 374 ~GDVfvvP~g~~h~~~-ag~e~~~~l~f~~s~np~~~~LaG~~sv~~~---ip~eVla~aF~v~~e~v~~Lk~~ 443 (465)
T 3qac_A 374 RGQLVVVPQNFAIVKQ-AFEDGFEWVSFKTSENAMFQSLAGRTSAIRS---LPIDVVSNIYQISREEAFGLKFN 443 (465)
T ss_dssp TTCEEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSSSBHHHH---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred CCeEEEECCCcEEEEE-cCCCCeEEEEEecCCCCcccccccchhhhhh---CCHHHHHHHhCCCHHHHHHHHhc
Confidence 9999999999999985 67889999999999999999997 789987 99999999999999999999874
No 5
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.97 E-value=1.2e-30 Score=239.77 Aligned_cols=147 Identities=16% Similarity=0.255 Sum_probs=136.7
Q ss_pred CCCCccCCCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEec
Q 042226 64 VAGNTENPLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQ 143 (216)
Q Consensus 64 ~~~~~~~~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~ 143 (216)
..+++.++.|++++.+++.+||+|+++++++++++|.||++.+||||++++|++||++|+++++++++++ ++++..+|+
T Consensus 294 ~~~~~~~~~gG~v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g-~~~~~~~l~ 372 (459)
T 2e9q_A 294 ERADVFNPRGGRISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFG-QSVFDGEVR 372 (459)
T ss_dssp SCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS-CEEEEEEEE
T ss_pred ccCCcccCCCeeEEEeccccCccccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCC-CEEEeeEEe
Confidence 3445557889999999999999999999999999999999999999999999999999999999998763 677778899
Q ss_pred CCcEEEEcCCCeEEEEECCCCcEEEEEEEeCCCCceeEee--hhhhcCCCCCCHHHHHHHcCCCHHHHHHHhhc
Q 042226 144 KGDVFVFPIGLVHFQRNVGHGNAFSISALSSQNPGVITIA--NAVFGSNPAIAADILAKAFQVDKSVVDQLQTK 215 (216)
Q Consensus 144 ~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~~ 215 (216)
+||+++||+|.+|++.| |++++.+++++++++|+.+.++ .++|++ +|++||+++|+++.+++++|+++
T Consensus 373 ~GDv~v~P~G~~H~~~n-g~~~~~~l~~~~s~~~~~~~laG~~s~~~~---~p~~Vla~af~v~~~~v~~l~~~ 442 (459)
T 2e9q_A 373 EGQVLMIPQNFVVIKRA-SDRGFEWIAFKTNDNAITNLLAGRVSQMRM---LPLGVLSNMYRISREEAQRLKYG 442 (459)
T ss_dssp TTCEEEECTTCEEEEEE-EEEEEEEEEEESSSSCCEEESSSSSSHHHH---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred CCcEEEECCCCEEEEEe-CCCCeEEEEEecCCCCcceeecchhHHHHh---CCHHHHHHHHCcCHHHHHHHHhc
Confidence 99999999999999999 7889999999999999999998 889998 99999999999999999999874
No 6
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.97 E-value=3.1e-30 Score=238.59 Aligned_cols=154 Identities=21% Similarity=0.318 Sum_probs=135.8
Q ss_pred ccccccC-CCCCccCCCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCC
Q 042226 57 FSFSGLH-VAGNTENPLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPEN 135 (216)
Q Consensus 57 F~~~~~~-~~~~~~~~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~ 135 (216)
+.|+..+ ...++.|+.|++++.+++.+||+|++++|++++++|.||++++|||||+++||+||++|+++++++++++ +
T Consensus 358 l~~Ni~~ps~~d~~n~~GG~v~~a~~~~fP~L~~LgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G-~ 436 (531)
T 3fz3_A 358 LKENIGNPERADIFSPRAGRISTLNSHNLPILRFLRLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENG-D 436 (531)
T ss_dssp CEEECCCGGGCSEEETTTEEEEEESTTTCTHHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS-C
T ss_pred eeeccCCcccCCcccCCCeEEEEeccccCCccccCceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCCC-c
Confidence 4555542 3445668889999999999999999999999999999999999999999999999999999999998752 5
Q ss_pred ceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEEEeCCCCceeEee--hhhhcCCCCCCHHHHHHHcCCCHHHHHHHh
Q 042226 136 RLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISALSSQNPGVITIA--NAVFGSNPAIAADILAKAFQVDKSVVDQLQ 213 (216)
Q Consensus 136 ~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~lf~~~p~~p~~vl~~af~~~~~~v~~l~ 213 (216)
++++++|++||+++||+|++|++. .+++.+.++++.++++|+...++ .++|++ +|++||+++|+++.+++++||
T Consensus 437 ~v~~~~L~~GDV~v~P~G~~H~~~-ag~e~l~flaF~ss~np~~~~LaG~~svf~~---lP~eVLa~aF~v~~e~v~kLk 512 (531)
T 3fz3_A 437 AILDQEVQQGQLFIVPQNHGVIQQ-AGNQGFEYFAFKTEENAFINTLAGRTSFLRA---LPDEVLANAYQISREQARQLK 512 (531)
T ss_dssp EEEEEEEETTCEEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSTTCHHHH---SCHHHHHHHHTCCHHHHHHHH
T ss_pred EEEEEEecCCeEEEECCCCeEEEe-cCCCCEEEEEEecCCCCcceeccchhHHHHh---CCHHHHHHHhCcCHHHHHHHH
Confidence 778999999999999999999875 56777777755466999999998 889998 999999999999999999998
Q ss_pred hc
Q 042226 214 TK 215 (216)
Q Consensus 214 ~~ 215 (216)
++
T Consensus 513 ~~ 514 (531)
T 3fz3_A 513 YN 514 (531)
T ss_dssp HS
T ss_pred hc
Confidence 74
No 7
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.96 E-value=3.6e-29 Score=229.44 Aligned_cols=157 Identities=18% Similarity=0.184 Sum_probs=136.0
Q ss_pred ccCCcccccccCCCCCccCCCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEec
Q 042226 52 AQASHFSFSGLHVAGNTENPLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTS 131 (216)
Q Consensus 52 ~~~~dF~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~ 131 (216)
.....+.|+.+.+++.++ ..|++++.+++.+||+|+++|++++++++.||++.+|||||+++|++||++|+++++++++
T Consensus 242 ~~~~~~~~~l~~~~p~~~-~~~G~v~~~~~~~fP~L~~l~is~~~v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~ 320 (445)
T 2cav_A 242 LSSQDKPFNLRSRDPIYS-NNYGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGL 320 (445)
T ss_dssp ----CCCEETTSSCCSEE-SSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC
T ss_pred CCCcccceeccccCCCcc-CCCceEEEeChHHCcccccCCCceEEEEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEeC
Confidence 344578899888877764 5667999999999999999999999999999999999999999999999999999999987
Q ss_pred CC-------CCc--eEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEEE-eCCCCceeEee---hhhhcCCCCCCHHHH
Q 042226 132 NP-------ENR--LITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISAL-SSQNPGVITIA---NAVFGSNPAIAADIL 198 (216)
Q Consensus 132 ~~-------~~~--~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~-~s~~pg~~~~~---~~lf~~~p~~p~~vl 198 (216)
++ +++ ++..+|++||+++||+|.+|++.|. +++.++++. ++++|+.+.++ .++|++ +|++||
T Consensus 321 ~~~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~~---~p~~vl 395 (445)
T 2cav_A 321 EQQQQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAA--SDLNMVGIGVNAENNERNFLAGHKENVIRQ---IPRQVS 395 (445)
T ss_dssp -----------CCEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEESCTTCCEEESSSSTTBSGGG---SCHHHH
T ss_pred CCcccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcC--CCeEEEEEEccCCCCCcEEcccchhhhhhh---CCHHHH
Confidence 52 124 6899999999999999999999998 467777755 56689999998 789998 999999
Q ss_pred HHHcCCCHHHHHHHhh
Q 042226 199 AKAFQVDKSVVDQLQT 214 (216)
Q Consensus 199 ~~af~~~~~~v~~l~~ 214 (216)
+++|++|.+++++|++
T Consensus 396 a~af~v~~~~v~~l~~ 411 (445)
T 2cav_A 396 DLTFPGSGEEVEELLE 411 (445)
T ss_dssp HHHSSSCHHHHHHHHH
T ss_pred HHHHCcCHHHHHHHHh
Confidence 9999999999999986
No 8
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.96 E-value=5.1e-29 Score=226.84 Aligned_cols=159 Identities=20% Similarity=0.211 Sum_probs=140.1
Q ss_pred cccCCcccccccCCCCCccCCCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEe
Q 042226 51 LAQASHFSFSGLHVAGNTENPLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVT 130 (216)
Q Consensus 51 ~~~~~dF~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~ 130 (216)
......+.|+.+.+++.+.|. +++++.+++.+||+|++++++++++++.||++.+||||++++|++||++|++++++++
T Consensus 209 g~~~~~~~~~l~~~~p~~~~~-~G~~~~~~~~~~P~L~~l~is~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~ 287 (416)
T 1uij_A 209 TISSEDEPFNLRSRNPIYSNN-FGKFFEITPEKNPQLRDLDIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVG 287 (416)
T ss_dssp GGGCSSSCEETTSSCCSEECS-SEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEE
T ss_pred CCCCcccceeccccCCCccCC-CceEEEEChHHCccchhcCcceEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEc
Confidence 344567889988877766554 4579999999999999999999999999999999999999999999999999999998
Q ss_pred cCCC----------C--ceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEEEeC-CCCceeEee---hhhhcCCCCCC
Q 042226 131 SNPE----------N--RLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISALSS-QNPGVITIA---NAVFGSNPAIA 194 (216)
Q Consensus 131 ~~~~----------~--~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s-~~pg~~~~~---~~lf~~~p~~p 194 (216)
+++. + +++..+|++||+++||+|.+|++.|. +++.+++++++ ++|+.+.++ .++|++ +|
T Consensus 288 ~~g~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~l~f~~~~~~~~~~~laG~~~sv~~~---~p 362 (416)
T 1uij_A 288 IKEQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT--SNLNFLAFGINAENNQRNFLAGEKDNVVRQ---IE 362 (416)
T ss_dssp EC------------CCEEEEEEEEETTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBSGGG---SC
T ss_pred CCCccccccccccccceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEEcCCCCCcceecccchhhHHHh---CC
Confidence 7520 1 46777999999999999999999998 67999988854 599999997 789998 99
Q ss_pred HHHHHHHcCCCHHHHHHHhhc
Q 042226 195 ADILAKAFQVDKSVVDQLQTK 215 (216)
Q Consensus 195 ~~vl~~af~~~~~~v~~l~~~ 215 (216)
++||+++|+++.+++++|++.
T Consensus 363 ~~vla~af~~~~~~v~~l~~~ 383 (416)
T 1uij_A 363 RQVQELAFPGSAQDVERLLKK 383 (416)
T ss_dssp HHHHHHHSSSCHHHHHHHTTS
T ss_pred HHHHHHHHCcCHHHHHHHHhc
Confidence 999999999999999999863
No 9
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.96 E-value=6.9e-29 Score=230.11 Aligned_cols=147 Identities=21% Similarity=0.321 Sum_probs=135.6
Q ss_pred CCCCccCCCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEec
Q 042226 64 VAGNTENPLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQ 143 (216)
Q Consensus 64 ~~~~~~~~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~ 143 (216)
..+++.++.|++++.+++.+||+|++++++++++++.||++.+||||++++|++||++|+++++++++++ ++++..+|+
T Consensus 344 ~~~~~~~~~gG~v~~~~~~~fP~L~~l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G-~~~~~~~l~ 422 (510)
T 3c3v_A 344 RSPDIYNPQAGSLKTANELNLLILRWLGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNG-NRVYDEELQ 422 (510)
T ss_dssp SCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTS-CEEEEEEEE
T ss_pred ccCCcccCCCeEEEEeccccCcccccceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCC-CEEEeEEEc
Confidence 3445567889999999999999999999999999999999999999999999999999999999998752 576778899
Q ss_pred CCcEEEEcCCCeEEEEECCCCcEEEEEEEeCCCCceeEee--hhhhcCCCCCCHHHHHHHcCCCHHHHHHHhhc
Q 042226 144 KGDVFVFPIGLVHFQRNVGHGNAFSISALSSQNPGVITIA--NAVFGSNPAIAADILAKAFQVDKSVVDQLQTK 215 (216)
Q Consensus 144 ~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~~ 215 (216)
+||+++||+|.+|++.| +++.+.+++++.+++|+...++ .++|++ +|.+||+++|+++.+++++|+++
T Consensus 423 ~GDv~viP~G~~H~~~N-g~e~l~~l~f~~s~~p~~~~LaG~~svf~~---lp~eVla~aF~v~~e~v~~L~~~ 492 (510)
T 3c3v_A 423 EGHVLVVPQNFAVAGKS-QSDNFEYVAFKTDSRPSIANLAGENSVIDN---LPEEVVANSYGLPREQARQLKNN 492 (510)
T ss_dssp TTCEEEECTTCEEEEEE-CSSEEEEEEEESSSSCCEEESSSTTSTTTT---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred CCcEEEECCCCeEEEEe-CCCCEEEEEEECCCCcceeecccHhHHHHh---CCHHHHHHHHCcCHHHHHHHHhh
Confidence 99999999999999999 8888999988878899999998 889998 99999999999999999999975
No 10
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.96 E-value=9.7e-29 Score=228.12 Aligned_cols=147 Identities=22% Similarity=0.329 Sum_probs=135.3
Q ss_pred CCCCccCCCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEec
Q 042226 64 VAGNTENPLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQ 143 (216)
Q Consensus 64 ~~~~~~~~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~ 143 (216)
..+++.++.|++++.++..+||+|+++++++++++++||++.+||||++++|++||++|+++++++++++ ++++..+|+
T Consensus 310 ~~~~~~~~~gG~v~~~~~~~~P~L~~l~is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G-~~~~~~~l~ 388 (476)
T 1fxz_A 310 SSPDIYNPQAGSVTTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNG-ERVFDGELQ 388 (476)
T ss_dssp SCCSEEETTTEEEEEECTTTSGGGTTTTCCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTS-CEEEEEEEE
T ss_pred ccCCcccCCCeEEEEeccccCcccccCcceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCC-CEEeeeEEc
Confidence 3345557889999999999999999999999999999999999999999999999999999999998652 566778899
Q ss_pred CCcEEEEcCCCeEEEEECCCCcEEEEEEEeCCCCceeEee--hhhhcCCCCCCHHHHHHHcCCCHHHHHHHhhc
Q 042226 144 KGDVFVFPIGLVHFQRNVGHGNAFSISALSSQNPGVITIA--NAVFGSNPAIAADILAKAFQVDKSVVDQLQTK 215 (216)
Q Consensus 144 ~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~~ 215 (216)
+||+++||+|.+|++.| |++.+.+++++.+++|+...++ .++|++ +|.+||+++|+++++++++|++.
T Consensus 389 ~GDv~viP~G~~H~~~n-g~~~l~~l~f~~s~~p~~~~laG~~s~~~~---~p~~Vla~af~~~~~~v~~l~~~ 458 (476)
T 1fxz_A 389 EGRVLIVPQNFVVAARS-QSDNFEYVSFKTNDTPMIGTLAGANSLLNA---LPEEVIQHTFNLKSQQARQIKNN 458 (476)
T ss_dssp TTCEEEECTTCEEEEEE-CSTTEEEEEEESSSSCCEEESSSTTCTGGG---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred CCCEEEECCCCeEEEEe-CCCCEEEEEEECCCCCceeEccchhHHHHh---CCHHHHHHHhCcCHHHHHHHHhh
Confidence 99999999999999999 8889999998888899999998 889998 99999999999999999999875
No 11
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.96 E-value=7.9e-29 Score=229.49 Aligned_cols=146 Identities=22% Similarity=0.365 Sum_probs=135.2
Q ss_pred CCCCccCCCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEec
Q 042226 64 VAGNTENPLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQ 143 (216)
Q Consensus 64 ~~~~~~~~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~ 143 (216)
.++++.++.|++++.+++.+||+|+++++++++++++||++.+||||++++|++||++|+++++++++++ ++++..+|+
T Consensus 339 ~~~~~~~~~gG~v~~~~~~~~P~L~~lgls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g-~~~~~~~l~ 417 (493)
T 2d5f_A 339 SRADFYNPKAGRISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQG-NAVFDGELR 417 (493)
T ss_dssp GGCSEEETTTEEEEEESTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS-CEEEEEEEE
T ss_pred CCCCcccCCCeEEEEeccccCccccccceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCC-CEEEeEEEc
Confidence 5566668899999999999999999999999999999999999999999999999999999999998652 566668899
Q ss_pred CCcEEEEcCCCeEEEEECCCCcEEEEEEEeCCCCceeEeehhhhcCCCCCCHHHHHHHcCCCHHHHHHHhhc
Q 042226 144 KGDVFVFPIGLVHFQRNVGHGNAFSISALSSQNPGVITIANAVFGSNPAIAADILAKAFQVDKSVVDQLQTK 215 (216)
Q Consensus 144 ~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~~ 215 (216)
+||+++||+|.+|++.| +++++.+++++++++|+.+.+ .++|++ +|++||+++|+++.+++++|+++
T Consensus 418 ~GDv~vvP~G~~H~~~n-~~e~~~~l~~~ts~~p~~~~l-~s~~~~---~p~eVla~aF~v~~~~v~~l~~~ 484 (493)
T 2d5f_A 418 RGQLLVVPQNFVVAEQG-GEQGLEYVVFKTHHNAVSSYI-KDVFRA---IPSEVLSNSYNLGQSQVRQLKYQ 484 (493)
T ss_dssp TTCEEEECTTCEEEEEE-EEEEEEEEEEESSTTCCEEEH-HHHHHH---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred CCCEEEECCCCeEeeee-CCCCEEEEEEECCCCCcceeH-HHHHHh---CCHHHHHHHHCcCHHHHHHHHhc
Confidence 99999999999999998 558999999999999999999 889998 99999999999999999999875
No 12
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.96 E-value=2.4e-28 Score=223.40 Aligned_cols=158 Identities=19% Similarity=0.198 Sum_probs=139.1
Q ss_pred cccCCcccccccCCCCCccCCCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEe
Q 042226 51 LAQASHFSFSGLHVAGNTENPLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVT 130 (216)
Q Consensus 51 ~~~~~dF~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~ 130 (216)
......+.|+.+.+++.+. ..|++++.+++.+||+|+++|++++++++.||++.+||||++++|++||++|++++++++
T Consensus 226 g~~~~~~~~~l~~~~p~~~-~~gG~v~~~~~~~~P~L~~l~is~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~ 304 (434)
T 2ea7_A 226 ELSSQDEPFNLRNSKPIYS-NKFGRWYEMTPEKNPQLKDLDVFISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELVG 304 (434)
T ss_dssp CTTCSSSCEETTSSCCSEE-ETTEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEE
T ss_pred CCCCcccceeeccCCCcee-CCCcEEEEEChhhCccccccCcceEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEEe
Confidence 3445678899887777664 556789999999999999999999999999999999999999999999999999999998
Q ss_pred cCCC---------C--ceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEEEe-CCCCceeEee---hhhhcCCCCCCH
Q 042226 131 SNPE---------N--RLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISALS-SQNPGVITIA---NAVFGSNPAIAA 195 (216)
Q Consensus 131 ~~~~---------~--~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~-s~~pg~~~~~---~~lf~~~p~~p~ 195 (216)
+++. + +++..+|++||+++||+|.+|++.|. +++.+++++. +++++.+.++ .++|++ +|+
T Consensus 305 ~~g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~~---~p~ 379 (434)
T 2ea7_A 305 LSDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINAT--SNLNFFAFGINAENNRRNFLAGGKDNVMSE---IPT 379 (434)
T ss_dssp EEECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBGGGG---SCH
T ss_pred cCccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEECCCCCCCceecccchhhhhhh---CCH
Confidence 7410 1 26677999999999999999999998 5788888764 5689999998 789998 999
Q ss_pred HHHHHHcCCCHHHHHHHhh
Q 042226 196 DILAKAFQVDKSVVDQLQT 214 (216)
Q Consensus 196 ~vl~~af~~~~~~v~~l~~ 214 (216)
+||+++|+++.+++++|++
T Consensus 380 ~vla~af~v~~~~v~~l~~ 398 (434)
T 2ea7_A 380 EVLEVSFPASGKKVEKLIK 398 (434)
T ss_dssp HHHHHHSSSCHHHHHHHHT
T ss_pred HHHHHHHCcCHHHHHHHHh
Confidence 9999999999999999986
No 13
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.95 E-value=1.6e-27 Score=216.77 Aligned_cols=154 Identities=20% Similarity=0.215 Sum_probs=134.4
Q ss_pred CcccccccCCCCCccCCCCceEEEeeccCC-CCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCC
Q 042226 55 SHFSFSGLHVAGNTENPLGSRVTPVTVAQI-PGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNP 133 (216)
Q Consensus 55 ~dF~~~~~~~~~~~~~~~g~~~~~~~~~~~-P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~ 133 (216)
..+.|+.+.+.+.++|. +++++.+++.+| |+|+++|+++++++|.||++.+|||||+++|++||++|+++++++++++
T Consensus 226 ~~~~~nl~~~~p~~~n~-~G~~~~~~~~~~~p~L~~~gis~~r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~ 304 (418)
T 3s7i_A 226 ITNPINLREGEPDLSNN-FGKLFEVKPDKKNPQLQDLDMMLTCVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRK 304 (418)
T ss_dssp CCCCEETTCSCCSEEET-TEEEEEECSBTTBHHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEE
T ss_pred CCcccccccCCCceeCC-CCeEEEechHHcchhhccCCeeEEEEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCC
Confidence 47889998888776544 456899999999 9999999999999999999999999999999999999999999997641
Q ss_pred C-----------------------CceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEEE-eCCCCceeEeeh---hh
Q 042226 134 E-----------------------NRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISAL-SSQNPGVITIAN---AV 186 (216)
Q Consensus 134 ~-----------------------~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~-~s~~pg~~~~~~---~l 186 (216)
. .+++...|++||+++||+|++|++.|.+ ++.+++.. ++++|+.+.++- ++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~~~--~l~~v~f~~~~~~~~~~~LAG~~~sv 382 (418)
T 3s7i_A 305 EQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINASS--ELHLLGFGINAENNHRIFLAGDKDNV 382 (418)
T ss_dssp C-------------------CCEEEEEEEEEECTTCEEEECTTCCEEEEESS--CEEEEEEEESCTTCCEEESSSSTTBH
T ss_pred ccccccccccccccccccccccccceEEEeeeCCCCEEEECCCCEEEEECCC--CEEEEEEEcCCCCCcceEccCchhhh
Confidence 0 0567899999999999999999998864 47776644 567999999984 78
Q ss_pred hcCCCCCCHHHHHHHcCCCHHHHHHHhh
Q 042226 187 FGSNPAIAADILAKAFQVDKSVVDQLQT 214 (216)
Q Consensus 187 f~~~p~~p~~vl~~af~~~~~~v~~l~~ 214 (216)
|++ +|++||+++|++|.+++++|++
T Consensus 383 ~~~---~~~evla~af~v~~~~v~~L~~ 407 (418)
T 3s7i_A 383 IDQ---IEKQAKDLAFPGSGEQVEKLIK 407 (418)
T ss_dssp HHH---SCHHHHHHHSSSCHHHHHHHHH
T ss_pred hhc---CCHHHHHHHhCCCHHHHHHHHh
Confidence 998 9999999999999999999986
No 14
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.94 E-value=2.2e-26 Score=187.08 Aligned_cols=149 Identities=14% Similarity=0.219 Sum_probs=124.5
Q ss_pred cccccccCCCCCccCCCCceEEEeec-----cCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEe
Q 042226 56 HFSFSGLHVAGNTENPLGSRVTPVTV-----AQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVT 130 (216)
Q Consensus 56 dF~~~~~~~~~~~~~~~g~~~~~~~~-----~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~ 130 (216)
.|+|+........ ...|++++.++. ..+|+++ ++++.+++++||+..+|| |++++|++||++|++++++++
T Consensus 3 p~~f~~~~~~~~~-~~~~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~pg~~~~pH-h~~a~E~~yVl~G~~~v~v~~ 78 (178)
T 1dgw_A 3 PYLFRSNKFLTLF-KNQHGSLRLLQRFNEDTEKLENLR--DYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVN 78 (178)
T ss_dssp TTEECGGGEEEEE-EETTEEEEEECCTTSSCGGGGGGT--TEEEEEEEECTTEEEEEE-EESSEEEEEEEESEEEEEEEE
T ss_pred Cceechhhcccce-EcCCCEEEEEcccCCcchhcCCcC--cEEEEEEEecCCcEecCc-CCCCCEEEEEEeEEEEEEEEe
Confidence 4777765544333 467888999887 6788887 479999999999999999 888999999999999999987
Q ss_pred cCCCCceEEEEecCCcEEEEcCCCeEEEEECCCC-cEEEEEEE-eCCCCceeE---ee-----hhhhcCCCCCCHHHHHH
Q 042226 131 SNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHG-NAFSISAL-SSQNPGVIT---IA-----NAVFGSNPAIAADILAK 200 (216)
Q Consensus 131 ~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~-~a~~l~~~-~s~~pg~~~---~~-----~~lf~~~p~~p~~vl~~ 200 (216)
++ + ...+.|++||+++||+|.+|++.|.|++ +++++++. ++++||.+. ++ .++|++ +|++||++
T Consensus 79 ~~--~-~~~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v~~~~~~~g~~~~~~l~g~~~~~~~~~~---~p~~vla~ 152 (178)
T 1dgw_A 79 PD--G-RDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLSA---FSKNFLEA 152 (178)
T ss_dssp TT--E-EEEEEEETTEEEEECTTCCEEEEECCSSSCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGGG---SCHHHHHH
T ss_pred CC--C-cEEEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEEECCCCCCCceEEeeccCCcCcchhhhh---CCHHHHHH
Confidence 63 2 2478999999999999999999999986 78888875 567787433 32 578998 99999999
Q ss_pred HcCCCHHHHHHHhh
Q 042226 201 AFQVDKSVVDQLQT 214 (216)
Q Consensus 201 af~~~~~~v~~l~~ 214 (216)
+|+++++++++|+.
T Consensus 153 af~v~~~~~~~l~~ 166 (178)
T 1dgw_A 153 SYDSPYDEIEQTLL 166 (178)
T ss_dssp HHTSCHHHHHHHTT
T ss_pred HHCcCHHHHHHHhc
Confidence 99999999999983
No 15
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.93 E-value=2.2e-25 Score=201.60 Aligned_cols=137 Identities=26% Similarity=0.222 Sum_probs=120.2
Q ss_pred CCCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEec------CCCCceEEEEec
Q 042226 70 NPLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTS------NPENRLITKVLQ 143 (216)
Q Consensus 70 ~~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~------~~~~~~~~~~L~ 143 (216)
+..+++++.+++.+ ++++++++++.||++.+||||++++|++||++|+++++++++ + +++++..+|+
T Consensus 223 ~n~~G~~~~v~~~~------l~is~a~v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~-g~~~~~~~l~ 295 (397)
T 2phl_A 223 GNEFGNLTERTDNS------LNVLISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETL-EYESYRAELS 295 (397)
T ss_dssp EETTEEEEEEEETT------TTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCS-CEEEEEEEEE
T ss_pred cCCCCeEEEEeecc------CCeeEEEEEEcCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCC-CceEEEEEec
Confidence 34566689999887 899999999999999999999999999999999999999987 3 2588899999
Q ss_pred CCcEEEEcCCCeEEEEECCCCcEEEEEEEe-CCCCceeEee---hhhhcCCC-CCC-HHHHHHHcCCCHHHHHHHhhc
Q 042226 144 KGDVFVFPIGLVHFQRNVGHGNAFSISALS-SQNPGVITIA---NAVFGSNP-AIA-ADILAKAFQVDKSVVDQLQTK 215 (216)
Q Consensus 144 ~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~-s~~pg~~~~~---~~lf~~~p-~~p-~~vl~~af~~~~~~v~~l~~~ 215 (216)
+||+++||+|.+|++.|.+ ++.++++.. +++|+.+.++ .++|++-| +|| .+||+++|+++++++++|+++
T Consensus 296 ~GDV~vvP~G~~h~~~n~~--~l~~l~f~~~s~~~~~~~laG~~~sv~~~~p~~~~~~eVla~af~v~~~~v~~l~~~ 371 (397)
T 2phl_A 296 KDDVFVIPAAYPVAIKATS--NVNFTGFGINANNNNRNLLAGKTDNVISSIGRALDGKDVLGLTFSGSGDEVMKLINK 371 (397)
T ss_dssp TTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSSSBHHHHHHTSTTHHHHHHHHSSSCHHHHHHHHTT
T ss_pred CCCEEEECCCCeEEEEeCC--CeEEEEEECCCCCCcceecccchhhHHhhCCCccchHHHHHHHhCcCHHHHHHHHhc
Confidence 9999999999999999986 788887654 5699999988 88999822 233 999999999999999999874
No 16
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.91 E-value=7.8e-24 Score=187.87 Aligned_cols=158 Identities=20% Similarity=0.249 Sum_probs=138.8
Q ss_pred CccccCCcccccccCCCCCccCCCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEE
Q 042226 49 PKLAQASHFSFSGLHVAGNTENPLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGF 128 (216)
Q Consensus 49 ~~~~~~~dF~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~ 128 (216)
+...+.++|+|+.+..++. .+..|+.++.+...++|++++ +++.+++++||+..++|||+++.|++||++|++++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~-~~~~gg~~~~~~~~~~~~~~~--~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v 270 (361)
T 2vqa_A 194 QTAKIEVPHTHNLLGQQPL-VSLGGNELRLASAKEFPGSFN--MTGALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTV 270 (361)
T ss_dssp CCCBCCSCCEEECTTSCCS-EEETTEEEEEECTTTCTTSTT--CEEEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEE
T ss_pred cCCCCCcceEeccccCCCc-ccCCCceEEEEehhhCcCccc--ceEEEEEECCCcccccccCCCCCEEEEEEeCEEEEEE
Confidence 4566788999998877663 356788899999999998875 5788999999999999999977999999999999998
Q ss_pred EecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEEEeCCCCceeEeehhhhcCCCCCCHHHHHHHcCCCHHH
Q 042226 129 VTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISALSSQNPGVITIANAVFGSNPAIAADILAKAFQVDKSV 208 (216)
Q Consensus 129 ~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~~~lf~~~p~~p~~vl~~af~~~~~~ 208 (216)
++++ ++...+.|++||++++|+|..|++.|.|++++++++++.+++++...++. ++++ +|++||+++|++++++
T Consensus 271 ~~~~--g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~~~~~~~~~~~-~~~~---~~~~vl~~~f~~~~~~ 344 (361)
T 2vqa_A 271 FASE--GKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFNDGDYQSIDLST-WLAS---NPSSVLGNTFQISPEL 344 (361)
T ss_dssp ECST--TCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESSSSCCCEEHHH-HHHT---SCHHHHHHHHTCCHHH
T ss_pred EcCC--CcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECCCCcceeeHHH-Hhhh---CCHHHHHHHHCcCHHH
Confidence 7654 45457899999999999999999999999999999999999999988876 5776 9999999999999999
Q ss_pred HHHHhhc
Q 042226 209 VDQLQTK 215 (216)
Q Consensus 209 v~~l~~~ 215 (216)
+++||++
T Consensus 345 ~~~l~~~ 351 (361)
T 2vqa_A 345 TKKLPVQ 351 (361)
T ss_dssp HTTSCCS
T ss_pred HHhhhcc
Confidence 9999875
No 17
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.91 E-value=3.5e-24 Score=196.89 Aligned_cols=139 Identities=22% Similarity=0.330 Sum_probs=117.9
Q ss_pred CCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCce-------------
Q 042226 71 PLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRL------------- 137 (216)
Q Consensus 71 ~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~------------- 137 (216)
..++.+.. ...+.|+|+++|++++|++|+||++.+||||+ ++|++||++|+++++++.+++ .+.
T Consensus 43 se~G~~~~-~~~~~~~l~~~gvs~~r~~i~pggl~~Ph~h~-a~ei~yVl~G~g~vg~v~p~~-~~tf~~~~~~~~~~~~ 119 (459)
T 2e9q_A 43 AEAGFTEV-WDQDNDEFQCAGVNMIRHTIRPKGLLLPGFSN-APKLIFVAQGFGIRGIAIPGC-AETYQTDLRRSQSAGS 119 (459)
T ss_dssp ETTEEEEE-CCTTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTC-CCCEEECCC-------
T ss_pred cCCcEEEe-cCCCChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEeeEEEEEEEeCCC-cchhccchhhcccccc
Confidence 44665555 55666999999999999999999999999998 899999999999999986641 111
Q ss_pred -------EEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEEEeCCC--------CceeEee-------------------
Q 042226 138 -------ITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISALSSQN--------PGVITIA------------------- 183 (216)
Q Consensus 138 -------~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~--------pg~~~~~------------------- 183 (216)
..+.|++||+++||+|++||++|.|++++++++++++.+ +..+.++
T Consensus 120 ~~~d~~q~~~~l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ 199 (459)
T 2e9q_A 120 AFKDQHQKIRPFREGDLLVVPAGVSHWMYNRGQSDLVLIVFADTRNVANQIDPYLRKFYLAGRPEQVERGVEEWERSSRK 199 (459)
T ss_dssp CCCEEECCCEEEETTEEEEECTTCCEEEEECSSSCEEEEEEEESSSTTCCSCSSCCEEESSSCCCCCSSTTCC-------
T ss_pred ccccccceeEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEecCCCcccccCcccceeeccCCccccchhhhcccccccc
Confidence 156999999999999999999999999999999998554 3344443
Q ss_pred -------hhhhcCCCCCCHHHHHHHcCCCHHHHHHHhhc
Q 042226 184 -------NAVFGSNPAIAADILAKAFQVDKSVVDQLQTK 215 (216)
Q Consensus 184 -------~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~~ 215 (216)
.++|++ +++++|+++|++|.+++++|+++
T Consensus 200 ~~~~~~~~nif~g---f~~evLa~aF~v~~~~v~kL~~~ 235 (459)
T 2e9q_A 200 GSSGEKSGNIFSG---FADEFLEEAFQIDGGLVRKLKGE 235 (459)
T ss_dssp -----CCCCTTTT---SCHHHHHHHHTCCHHHHHHHHTT
T ss_pred ccccccccchhhc---CCHHHHHhhcCCCHHHHHhhhhc
Confidence 379998 99999999999999999999865
No 18
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.90 E-value=1.5e-23 Score=191.73 Aligned_cols=152 Identities=17% Similarity=0.253 Sum_probs=125.2
Q ss_pred CCcccccccC-CCCCccCCCCceEEEeec--cCCCCCccCc-eEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEE
Q 042226 54 ASHFSFSGLH-VAGNTENPLGSRVTPVTV--AQIPGLNTLG-VSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFV 129 (216)
Q Consensus 54 ~~dF~~~~~~-~~~~~~~~~g~~~~~~~~--~~~P~l~~~g-vs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~ 129 (216)
.+.|+|+... ..... ...|++++.++. .+.|.|++++ +++++++++||+..+|| |++++|++||++|+++++++
T Consensus 20 ~~p~~f~~~~~~~~~~-~se~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~Ei~yVl~G~g~v~~v 97 (434)
T 2ea7_A 20 NNPFYFNSDRWFRTLY-RNEWGHIRVLQRFDQRSKQMQNLENYRVVEFKSKPNTLLLPH-HADADFLLVVLNGTAVLTLV 97 (434)
T ss_dssp GCTTEECTTTSEEEEE-EETTEEEEEECCSTTTCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEE
T ss_pred CCCeEEeccccccceE-EcCCEEEEEEeccCCcccccCccccEEEEEEEecCCcCccCc-cCCCceEEEEEecEEEEEEE
Confidence 3457776433 22222 356788888743 5668899998 99999999999999999 77799999999999999998
Q ss_pred ecCCCCceEEEEecCCcEEEEcCCCeEEEEECC-CCcEEEEEEEe-CCCCce---eEeeh-----hhhcCCCCCCHHHHH
Q 042226 130 TSNPENRLITKVLQKGDVFVFPIGLVHFQRNVG-HGNAFSISALS-SQNPGV---ITIAN-----AVFGSNPAIAADILA 199 (216)
Q Consensus 130 ~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g-~~~a~~l~~~~-s~~pg~---~~~~~-----~lf~~~p~~p~~vl~ 199 (216)
++ ++..++.|++||+++||+|..|+++|.| ++++++++++. +++||. +.++. ++|++ +|++||+
T Consensus 98 ~~---~~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e~l~~l~~~~~s~~pg~~~~f~l~g~~~~~~~~~~---~~~~vLa 171 (434)
T 2ea7_A 98 NP---DSRDSYILEQGHAQKIPAGTTFFLVNPDDNENLRIIKLAIPVNNPHRFQDFFLSSTEAQQSYLRG---FSKNILE 171 (434)
T ss_dssp CS---SCEEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEECSCCSSCCCGGGG---SCHHHHH
T ss_pred eC---CCCEEEEeCCCCEEEECCCccEEEEeCCCCCCeEEEEEecCCCCCCceeeeeecCCcchhhhhhc---CCHHHHH
Confidence 75 3456899999999999999999999998 78999999874 667653 23443 48887 9999999
Q ss_pred HHcCCCHHHHHHHh
Q 042226 200 KAFQVDKSVVDQLQ 213 (216)
Q Consensus 200 ~af~~~~~~v~~l~ 213 (216)
++|++|.+++++|+
T Consensus 172 ~af~v~~~~v~~l~ 185 (434)
T 2ea7_A 172 ASFDSDFKEINRVL 185 (434)
T ss_dssp HHHTSCHHHHHHHH
T ss_pred HHhCCCHHHHHhhh
Confidence 99999999999998
No 19
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.90 E-value=3.2e-23 Score=189.95 Aligned_cols=153 Identities=15% Similarity=0.212 Sum_probs=125.7
Q ss_pred CCcccccccCCCCCccCCCCceEEEeec--cCCCCCccCc-eEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEe
Q 042226 54 ASHFSFSGLHVAGNTENPLGSRVTPVTV--AQIPGLNTLG-VSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVT 130 (216)
Q Consensus 54 ~~dF~~~~~~~~~~~~~~~g~~~~~~~~--~~~P~l~~~g-vs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~ 130 (216)
.+.|+|+........ ...++.++.++. .+.|.++++| +++++++++||+..+|| |++++|++||++|++++++++
T Consensus 46 ~~p~vf~~~~~~~~i-~~e~G~i~~l~~~~~~~~~l~~~g~~s~~~~~l~Pgg~~~pH-h~~a~E~~yVl~G~g~v~~v~ 123 (445)
T 2cav_A 46 NNPYLFRSNKFLTLF-KNQHGSLRLLQRFNEDTEKLENLRDYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVN 123 (445)
T ss_dssp CCTTEECGGGEEEEE-EETTEEEEEECCTTSSCSTTGGGTTEEEEEEEECSSEEEEEE-EESSEEEEEEEESEEEEEEEE
T ss_pred CCCeEEchhhcCceE-EcCCEEEEEEeccCcccccccccCcEEEEEEEECCCcCccCc-CCCCceEEEEEeCEEEEEEEe
Confidence 455666654322122 235777888754 5567899988 99999999999999999 667999999999999999987
Q ss_pred cCCCCceEEEEecCCcEEEEcCCCeEEEEECC-CCcEEEEEEEe-CCCCcee---Eee-----hhhhcCCCCCCHHHHHH
Q 042226 131 SNPENRLITKVLQKGDVFVFPIGLVHFQRNVG-HGNAFSISALS-SQNPGVI---TIA-----NAVFGSNPAIAADILAK 200 (216)
Q Consensus 131 ~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g-~~~a~~l~~~~-s~~pg~~---~~~-----~~lf~~~p~~p~~vl~~ 200 (216)
++ ++ +++.+++||+++||+|..|+++|.| +++++++++++ +++||.+ .++ .++|++ +|++||++
T Consensus 124 ~~--~~-~~~~l~~GDv~~~P~G~~H~~~N~g~~~~l~~l~v~~~~~~pg~~~~F~laG~~~~~~~~~~---~~~~vLa~ 197 (445)
T 2cav_A 124 PD--GR-DTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLSA---FSKNFLEA 197 (445)
T ss_dssp TT--EE-EEEEEETTEEEEECTTCCEEEEECCSSCCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGGG---SCHHHHHH
T ss_pred CC--CC-EEEEecCCCEEEECCCCcEEEEECCCCCCEEEEEEeccCCCCCceeeeeccCCCchhhhhhc---CCHHHHHH
Confidence 63 44 6899999999999999999999999 79999999987 5667632 343 378998 99999999
Q ss_pred HcCCCHHHHHHHhh
Q 042226 201 AFQVDKSVVDQLQT 214 (216)
Q Consensus 201 af~~~~~~v~~l~~ 214 (216)
+|++|.+++++|++
T Consensus 198 af~v~~~~v~~l~~ 211 (445)
T 2cav_A 198 SYDSPYDEIEQTLL 211 (445)
T ss_dssp HHTSCHHHHHHHTT
T ss_pred HhCCCHHHHHhhhc
Confidence 99999999999984
No 20
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.90 E-value=1.7e-23 Score=190.40 Aligned_cols=152 Identities=19% Similarity=0.280 Sum_probs=123.3
Q ss_pred CCccccc-ccCCCCCccCCCCceEEEeec--cCCCCCccCc-eEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEE
Q 042226 54 ASHFSFS-GLHVAGNTENPLGSRVTPVTV--AQIPGLNTLG-VSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFV 129 (216)
Q Consensus 54 ~~dF~~~-~~~~~~~~~~~~g~~~~~~~~--~~~P~l~~~g-vs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~ 129 (216)
.+.|+|+ -.... ......|+.++.++. ...+.+++++ +++++++++||+..+|| |++++|++||++|+++++++
T Consensus 8 ~~p~~f~~~~~~~-~~~~~e~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~E~~yVl~G~g~v~~v 85 (416)
T 1uij_A 8 NNPFYFRSSNSFQ-TLFENQNGRIRLLQRFNKRSPQLENLRDYRIVQFQSKPNTILLPH-HADADFLLFVLSGRAILTLV 85 (416)
T ss_dssp SCTTEECGGGSEE-EEEECSSEEEEEECCHHHHCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESCEEEEEE
T ss_pred CCCeEeccccccc-ceEEcCCEEEEEEeccCCccccccCcccEEEEEEEeccCcCcccc-cCCCceEEEEEeeEEEEEEE
Confidence 3456666 32211 112456788888743 4457888888 99999999999999999 66799999999999999998
Q ss_pred ecCCCCceEEEEecCCcEEEEcCCCeEEEEECC-CCcEEEEEEEe-CCCCcee---Eeeh-----hhhcCCCCCCHHHHH
Q 042226 130 TSNPENRLITKVLQKGDVFVFPIGLVHFQRNVG-HGNAFSISALS-SQNPGVI---TIAN-----AVFGSNPAIAADILA 199 (216)
Q Consensus 130 ~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g-~~~a~~l~~~~-s~~pg~~---~~~~-----~lf~~~p~~p~~vl~ 199 (216)
++ ++..++.+++||+++||+|..|+++|.| ++++++++++. +++||.+ .++. ++|++ +|++||+
T Consensus 86 ~~---~~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e~l~~l~~~~~~~~pg~~~~f~l~g~~~~~~~~~~---~~~~vLa 159 (416)
T 1uij_A 86 NN---DDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQNLKMIWLAIPVNKPGRYDDFFLSSTQAQQSYLQG---FSHNILE 159 (416)
T ss_dssp CS---SCEEEEEECTTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEESSCBSSCCCGGGG---SCHHHHH
T ss_pred EC---CCCeEEEecCCCEEEECCCCeEEEEecCCCCCEEEEEEeccCCCCCcceeeeecCCcccchhhhc---CCHHHHH
Confidence 76 3445899999999999999999999995 99999999986 5666633 3432 48887 9999999
Q ss_pred HHcCCCHHHHHHHh
Q 042226 200 KAFQVDKSVVDQLQ 213 (216)
Q Consensus 200 ~af~~~~~~v~~l~ 213 (216)
++|++|.+++++|+
T Consensus 160 ~af~v~~~~v~~l~ 173 (416)
T 1uij_A 160 TSFHSEFEEINRVL 173 (416)
T ss_dssp HHHTSCHHHHHHHH
T ss_pred HHhCcCHHHHHhhh
Confidence 99999999999998
No 21
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.90 E-value=2.3e-23 Score=192.32 Aligned_cols=138 Identities=17% Similarity=0.280 Sum_probs=117.6
Q ss_pred CCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCc--------------
Q 042226 71 PLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENR-------------- 136 (216)
Q Consensus 71 ~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~-------------- 136 (216)
..++.+...+ .+.|+|+++|+++++++++||++.+||||+ ++|++||++|+++++++.++ ++
T Consensus 28 se~G~~e~~~-~~~~~l~~~gvs~~r~~l~Pggl~~Ph~~~-a~ei~yV~~G~g~~g~v~pg--~~et~~~~~~~~~~~~ 103 (476)
T 1fxz_A 28 SEGGLIETWN-PNNKPFQCAGVALSRCTLNRNALRRPSYTN-GPQEIYIQQGKGIFGMIYPG--CPSTFEEPQQPQQRGQ 103 (476)
T ss_dssp ETTEEEEECC-TTSHHHHHHTCEEEEEEECTTEEEEEEEES-SCEEEEEEECCEEEEEECTT--CCCC------------
T ss_pred cCCceEEeeC-CCChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEecEEEEEEEcCC--Ccchhhcccccccccc
Confidence 4566666654 555999999999999999999999999999 89999999999999999764 21
Q ss_pred --------eEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEEEeCCCC--------ceeEee-----------------
Q 042226 137 --------LITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISALSSQNP--------GVITIA----------------- 183 (216)
Q Consensus 137 --------~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~p--------g~~~~~----------------- 183 (216)
-..+.|++||+++||+|++||++|.|++++++++++++.++ ..+.++
T Consensus 104 ~~~~~d~~qk~~~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~ 183 (476)
T 1fxz_A 104 SSRPQDRHQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFLKYQQEQGGH 183 (476)
T ss_dssp ------CCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTHHHHC-----
T ss_pred ccccccccceEEEEeCCCEEEECCCCcEEEEeCCCCCEEEEEEecCCCcccccCCccceeeccCCccccccccccccccc
Confidence 02679999999999999999999999999999999985442 344443
Q ss_pred ---------------hhhhcCCCCCCHHHHHHHcCCCHHHHHHHhhc
Q 042226 184 ---------------NAVFGSNPAIAADILAKAFQVDKSVVDQLQTK 215 (216)
Q Consensus 184 ---------------~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~~ 215 (216)
.++|++ +++++|+++|++|.++++||+++
T Consensus 184 ~~~~~~~~~~~~~~~~~if~g---f~~~vLa~af~v~~~~~~kl~~~ 227 (476)
T 1fxz_A 184 QSQKGKHQQEEENEGGSILSG---FTLEFLEHAFSVDKQIAKNLQGE 227 (476)
T ss_dssp --------------CCCGGGG---SCHHHHHHHHTCCHHHHHHHSCC
T ss_pred cccccccccccccccchhhhc---CCHHHHHhhhCCCHHHHHhhhcc
Confidence 479988 99999999999999999999864
No 22
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.90 E-value=2.5e-23 Score=188.12 Aligned_cols=152 Identities=16% Similarity=0.182 Sum_probs=125.9
Q ss_pred CCcccccccC-CCCCccCCCCceEEEe--eccCCCCCccCc-eEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEE
Q 042226 54 ASHFSFSGLH-VAGNTENPLGSRVTPV--TVAQIPGLNTLG-VSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFV 129 (216)
Q Consensus 54 ~~dF~~~~~~-~~~~~~~~~g~~~~~~--~~~~~P~l~~~g-vs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~ 129 (216)
.+.|+|.-.. .. ......++.++.+ ...+.|+|+++| +++++++++||++.+||||. ++|++||++|+++++++
T Consensus 11 ~~p~~f~~~~~~~-~~~~~e~G~i~~l~~~~~~~~~l~~~~~~s~~~~~l~pgg~~~ph~~~-a~ei~yVl~G~~~v~~v 88 (397)
T 2phl_A 11 DNPFYFNSDNSWN-TLFKNQYGHIRVLQRFDQQSKRLQNLEDYRLVEFRSKPETLLLPQQAD-AELLLVVRSGSAILVLV 88 (397)
T ss_dssp CCTTEECGGGTEE-EEEEETTEEEEEECCHHHHCGGGGGGTTCEEEEEEECSSEEEEEEEES-EEEEEEEEESEEEEEEE
T ss_pred CCCcEeccchhcc-ceEEcCCEEEEEecccCCCChhhcccccEEEEEEEECCCcCccCEecC-CCeEEEEEeeeEEEEEE
Confidence 3456666433 11 1224678888887 446669999998 99999999999999999995 99999999999999999
Q ss_pred ecCCCCceEEEEecCCcE------EEEcCCCeEEEEECC-CCcEEEEEEEeCCC-C--ceeEee-----hhhhcCCCCCC
Q 042226 130 TSNPENRLITKVLQKGDV------FVFPIGLVHFQRNVG-HGNAFSISALSSQN-P--GVITIA-----NAVFGSNPAIA 194 (216)
Q Consensus 130 ~~~~~~~~~~~~L~~GDv------~~~P~G~~H~~~N~g-~~~a~~l~~~~s~~-p--g~~~~~-----~~lf~~~p~~p 194 (216)
+++ ++ .++.|++||+ ++||+|++||++|.| ++++++++++++.+ | ..+.++ .++|++ +|
T Consensus 89 ~~~--~~-~~~~l~~GDv~~~~~~~~iP~G~~h~~~N~g~~~~l~~i~~~~~~~~~~~~~f~L~G~~~~~s~~~~---~~ 162 (397)
T 2phl_A 89 KPD--DR-REYFFLTSDNPIFSDHQKIPAGTIFYLVNPDPKEDLRIIQLAMPVNNPQIHEFFLSSTEAQQSYLQE---FS 162 (397)
T ss_dssp ETT--TE-EEEEEEESSCTTSCSEEEECTTCEEEEEECCSSCCEEEEEEEEESSSSSCCEEECCCBTTBCCGGGG---SC
T ss_pred eCC--Cc-EEEEECCCCcccccceEEECCCCcEEEEeCCCCCCeEEEEeecCCCCccceeeeccCCCchhHHhhc---CC
Confidence 874 45 5899999999 999999999999999 78999999987443 3 334443 358887 99
Q ss_pred HHHHHHHcCCCHHHHHHHh
Q 042226 195 ADILAKAFQVDKSVVDQLQ 213 (216)
Q Consensus 195 ~~vl~~af~~~~~~v~~l~ 213 (216)
++||+++|+++.+++++|+
T Consensus 163 ~~vLa~af~v~~~~v~~l~ 181 (397)
T 2phl_A 163 KHILEASFNSKFEEINRVL 181 (397)
T ss_dssp HHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHhhh
Confidence 9999999999999999998
No 23
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.89 E-value=3.3e-23 Score=190.17 Aligned_cols=138 Identities=22% Similarity=0.401 Sum_probs=119.2
Q ss_pred CCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceE------------
Q 042226 71 PLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLI------------ 138 (216)
Q Consensus 71 ~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~------------ 138 (216)
..|+.+...+..+ +.|+++|++++|++|+||++.+|||| +++|++||++|+++++++.++. ++.+
T Consensus 30 se~G~~e~~d~~~-~~l~~~gvs~~R~~i~P~gl~~Ph~h-~a~ei~yV~qG~g~~g~v~pgc-~etf~~~~~~~~~~~~ 106 (465)
T 3qac_A 30 AERGLTEVWDSNE-QEFRCAGVSVIRRTIEPHGLLLPSFT-SAPELIYIEQGNGITGMMIPGC-PETYESGSQQFQGGED 106 (465)
T ss_dssp ETTEEEEECCTTS-HHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECEEEEEEECTTC-CCCC------------
T ss_pred CCCcEEEEECCCC-hhhcccceEEEEEEEcCCcCcccEEc-CCCEEEEEEECcEEEEEecCCC-Cceeecchhccccccc
Confidence 5678788887555 68999999999999999999999999 6999999999999999987632 2222
Q ss_pred ------------------------EEEecCCcEEEEcCCCeEEEEECCCCcEEEEEEEeCCC---------CceeEee--
Q 042226 139 ------------------------TKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISALSSQN---------PGVITIA-- 183 (216)
Q Consensus 139 ------------------------~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~---------pg~~~~~-- 183 (216)
.+.+++||+++||+|+.||++|.|++++++++++++.| +..+.++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~n~~nqld~~~~r~F~LaG~ 186 (465)
T 3qac_A 107 ERIREQGSRKFGMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILIDTANHANQLDKNFPTRFYLAGK 186 (465)
T ss_dssp ------------------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEECTTSTTCCSCSSSCCEEESSSC
T ss_pred cccccccccccccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCCCcccccccccceeEEecCC
Confidence 46999999999999999999999999999999997643 4445554
Q ss_pred ----------------------hhhhcCCCCCCHHHHHHHcCCCHHHHHHHhh
Q 042226 184 ----------------------NAVFGSNPAIAADILAKAFQVDKSVVDQLQT 214 (216)
Q Consensus 184 ----------------------~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~ 214 (216)
.++|++ +++++|++||+++.++++||++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~ni~sg---F~~e~La~Af~v~~~~~~kl~~ 236 (465)
T 3qac_A 187 PQQEHSGEHQFSRESRRGERNTGNIFRG---FETRLLAESFGVSEEIAQKLQA 236 (465)
T ss_dssp CCCSCC--------------CCCCGGGG---SCHHHHHHHHTCCHHHHHHHHT
T ss_pred Cccccccccccccccccccccccchhhc---CCHHHHHHHhCCCHHHHHHhhh
Confidence 379998 9999999999999999999975
No 24
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.89 E-value=1.1e-22 Score=188.00 Aligned_cols=137 Identities=21% Similarity=0.322 Sum_probs=116.3
Q ss_pred CCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceE------------
Q 042226 71 PLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLI------------ 138 (216)
Q Consensus 71 ~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~------------ 138 (216)
..|+. +.+...+.|+|+++|++++|++|.||++++|||| +++|++||++|++.++++.++. ++.+
T Consensus 26 se~G~-~e~~~~~~~~L~~~gvs~~R~~i~pggl~lPh~~-~A~ei~~V~qG~g~~G~v~p~~-~e~f~~~~~~~~~~~~ 102 (496)
T 3ksc_A 26 SEGGL-IETWNPNNKQFRCAGVALSRATLQRNALRRPYYS-NAPQEIFIQQGNGYFGMVFPGC-PETFEEPQESEQGEGR 102 (496)
T ss_dssp ETTEE-EEECCTTSHHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECCEEEEEECTTC-CCC-------------
T ss_pred CCCcE-EEeccccchhhccCCceEEEEEecCCCEeCceEc-CCCEEEEEEeCceEEEEEeCCC-Cccchhhhhccccccc
Confidence 34554 4445578899999999999999999999999999 6999999999999999987641 2222
Q ss_pred --------EEEecCCcEEEEcCCCeEEEEECCCCcEEEEEEEeCCCC--------ceeEee-------------------
Q 042226 139 --------TKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISALSSQNP--------GVITIA------------------- 183 (216)
Q Consensus 139 --------~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~p--------g~~~~~------------------- 183 (216)
.+.|++||+|+||+|++||++|.|+++++++++++..++ ..+.++
T Consensus 103 ~~~d~~qk~~~l~~GDV~viPaG~~h~~~N~G~~~lv~v~~~d~~n~~NQld~~~r~F~LaG~~~~~~~~~~~~~~~~~~ 182 (496)
T 3ksc_A 103 RYRDRHQKVNRFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDIRSSNNQLDQMPRRFYLAGNHEQEFLQYQHQQGGKQE 182 (496)
T ss_dssp --CCCCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTGGGCC-------
T ss_pred ccccchheeeccCCCCEEEECCCCcEEEEcCCCCCEEEEEEeccCcccccCCCceeeeEecCCCcccccccccccccccc
Confidence 459999999999999999999999999999999975543 233333
Q ss_pred -----hhhhcCCCCCCHHHHHHHcCCCHHHHHHHh
Q 042226 184 -----NAVFGSNPAIAADILAKAFQVDKSVVDQLQ 213 (216)
Q Consensus 184 -----~~lf~~~p~~p~~vl~~af~~~~~~v~~l~ 213 (216)
.++|+. ++.++|+.||+++.++++||+
T Consensus 183 ~~~~~~ni~sg---F~~e~La~Af~v~~e~~~kl~ 214 (496)
T 3ksc_A 183 QENEGNNIFSG---FKRDFLEDAFNVNRHIVDRLQ 214 (496)
T ss_dssp ----CCSGGGG---SCHHHHHHHHTCCHHHHHHHT
T ss_pred ccccCCCchhh---cCHHHHHHHHCCCHHHHHHHH
Confidence 479998 999999999999999999998
No 25
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.88 E-value=2.3e-22 Score=182.90 Aligned_cols=135 Identities=19% Similarity=0.314 Sum_probs=112.5
Q ss_pred CCCCceEEEee-----ccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecC
Q 042226 70 NPLGSRVTPVT-----VAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQK 144 (216)
Q Consensus 70 ~~~g~~~~~~~-----~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~ 144 (216)
...++.++.+. ...+|+|++. ++++++++||++.+|| |++++|++||++|+++++++++ ++.+.+.|++
T Consensus 19 ~se~G~i~~l~~f~~~s~~l~~l~~~--~l~~~~l~p~gl~~Ph-h~~A~ei~yV~~G~g~~g~V~~---~~~~~~~l~~ 92 (418)
T 3s7i_A 19 GNQNGRIRVLQRFDQRSRQFQNLQNH--RIVQIEAKPNTLVLPK-HADADNILVIQQGQATVTVANG---NNRKSFNLDE 92 (418)
T ss_dssp ECSSEEEEEECCHHHHCGGGGGGTTC--EEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEECS---SCEEEEEEET
T ss_pred EcCCcEEEEecccCCcchhcccccce--EEEEEEecCCceeeee-eCCCCeEEEEEEeeEEEEEEec---CCEEEEEecC
Confidence 45677788874 3577777755 6678889999999999 8899999999999999999987 4556899999
Q ss_pred CcEEEEcCCCeEEEEECCCC-cEEEEE-EEeCCCCceeEe--------ehhhhcCCCCCCHHHHHHHcCCCHHHHHHHh
Q 042226 145 GDVFVFPIGLVHFQRNVGHG-NAFSIS-ALSSQNPGVITI--------ANAVFGSNPAIAADILAKAFQVDKSVVDQLQ 213 (216)
Q Consensus 145 GDv~~~P~G~~H~~~N~g~~-~a~~l~-~~~s~~pg~~~~--------~~~lf~~~p~~p~~vl~~af~~~~~~v~~l~ 213 (216)
||+++||+|++||++|.|+. .+++++ ..++++||.+.. ..++|++ +|++||+++|+++.+++++|+
T Consensus 93 GDv~~~P~G~~h~~~N~g~~~~l~i~~l~~~s~~pg~~~~f~laG~~~~~s~~~g---f~~evLa~af~v~~~~v~kl~ 168 (418)
T 3s7i_A 93 GHALRIPSGFISYILNRHDNQNLRVAKISMPVNTPGQFEDFFPASSRDQSSYLQG---FSRNTLEAAFNAEFNEIRRVL 168 (418)
T ss_dssp TEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEECSSCCSSCCCGGGG---SCHHHHHHHHTSCHHHHHHHT
T ss_pred CCEEEECCCCeEEEEecCCCccEEEEEeecCcCCCCccceeeccCCcchhHHhhc---CCHHHHHHHHCcCHHHHHhhh
Confidence 99999999999999998764 556555 356778876433 1368987 999999999999999999997
No 26
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.87 E-value=4.4e-22 Score=184.35 Aligned_cols=140 Identities=24% Similarity=0.433 Sum_probs=115.6
Q ss_pred CCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCC----------------
Q 042226 71 PLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPE---------------- 134 (216)
Q Consensus 71 ~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~---------------- 134 (216)
..|+.+.. ...+.|+|+++|+++++++|.||++.+||||+ +.|++||++|+++++++.+++.
T Consensus 25 se~G~~e~-~~~~~~~l~~~gv~~~r~~i~pggl~~Ph~~~-~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~ 102 (493)
T 2d5f_A 25 SEGGLIET-WNSQHPELQCAGVTVSKRTLNRNGLHLPSYSP-YPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSR 102 (493)
T ss_dssp CSSEEEEE-CCTTSHHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECEEEEEECCTTCCCCEEECC---------
T ss_pred cCCcEEEE-eCCCChhhccCCEEEEEEEeCCCcEeCceecC-CCeEEEEEeCEEEEEEEeCCCccccccccccccccccc
Confidence 34664444 55666999999999999999999999999999 6899999999999999954310
Q ss_pred C-------ceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEEEeCC---C-----CceeEee----------------
Q 042226 135 N-------RLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISALSSQ---N-----PGVITIA---------------- 183 (216)
Q Consensus 135 ~-------~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~---~-----pg~~~~~---------------- 183 (216)
. .-..+.|++||+++||+|++||++|.|+++++++++++.. | +..+.++
T Consensus 103 ~~~~~~d~~qkv~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~ 182 (493)
T 2d5f_A 103 SQQQLQDSHQKIRHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDTSNFNNQLDQNPRVFYLAGNPDIEHPETMQQQQQ 182 (493)
T ss_dssp ----CSEEESCEEEEETTEEEEECTTCCEEEEECSSSCEEEEEEECTTCTTCCSCSSCCCEESSSCCCCSCGGGTC----
T ss_pred cccccccccceEEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEecCcCcccccccccceeeccCCccccchhhhhhccc
Confidence 0 0025699999999999999999999999999999999733 2 2333443
Q ss_pred -------------------hhhhcCCCCCCHHHHHHHcCCCHHHHHHHhhc
Q 042226 184 -------------------NAVFGSNPAIAADILAKAFQVDKSVVDQLQTK 215 (216)
Q Consensus 184 -------------------~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~~ 215 (216)
.++|++ +++++|+++|+++.+++++|+++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~nif~g---f~~e~La~aF~v~~~~v~kl~~~ 230 (493)
T 2d5f_A 183 QKSHGGRKQGQHQQQEEEGGSVLSG---FSKHFLAQSFNTNEDTAEKLRSP 230 (493)
T ss_dssp -----------------CCCCGGGG---SCHHHHHHHTTCCHHHHHHTTCT
T ss_pred ccccccccccccccccccccchhhc---CCHHHHHhHhCCCHHHHHHhhhc
Confidence 478987 99999999999999999999864
No 27
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.87 E-value=7.4e-22 Score=181.22 Aligned_cols=140 Identities=22% Similarity=0.321 Sum_probs=118.5
Q ss_pred CCCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCce------------
Q 042226 70 NPLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRL------------ 137 (216)
Q Consensus 70 ~~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~------------ 137 (216)
...++.+...+..+ |+|+++|++++++++.||++++||||+ ++|++||++|+++++++.++.....
T Consensus 22 ~se~G~~e~w~~~~-~~L~~~gvs~~r~~i~p~Gl~lPh~~~-a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~ 99 (466)
T 3kgl_A 22 KAEAGRIEVWDHHA-PQLRCSGVSFVRYIIESKGLYLPSFFS-TAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGS 99 (466)
T ss_dssp EETTEEEEECCTTS-HHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC--
T ss_pred eCCCcEEEEECCCC-hhhccCCeEEEEEEECCCCEeCCeeCC-CCeEEEEEeCeEEEEEecCCCcchhhccccccccccc
Confidence 35677788877666 999999999999999999999999998 9999999999999999976310100
Q ss_pred ---------------------------------------------EEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEEE
Q 042226 138 ---------------------------------------------ITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISAL 172 (216)
Q Consensus 138 ---------------------------------------------~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~ 172 (216)
..+.|++||+++||+|++||++|.|++++++++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~ 179 (466)
T 3kgl_A 100 PFGEGQGQGQQGQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVL 179 (466)
T ss_dssp ---------------------------------------CCEEESCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccceeeccccCCCEEEECCCCcEEEEeCCCCcEEEEEEE
Confidence 02489999999999999999999999999999999
Q ss_pred eCCC--------CceeEee------------------hhhhcCCCCCCHHHHHHHcCCCHHHHHHHhh
Q 042226 173 SSQN--------PGVITIA------------------NAVFGSNPAIAADILAKAFQVDKSVVDQLQT 214 (216)
Q Consensus 173 ~s~~--------pg~~~~~------------------~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~ 214 (216)
+..| +..+.++ .++|++ ++.++|++||+++.++++||++
T Consensus 180 d~~n~~nQld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ni~sG---F~~e~La~Af~v~~e~~~kL~~ 244 (466)
T 3kgl_A 180 DLASHQNQLDRNPRPFYLAGNNPQGQVWIEGREQQPQKNILNG---FTPEVLAKAFKIDVRTAQQLQN 244 (466)
T ss_dssp ESSSTTCCSCSSCCEEESSCCBTTCCTTSTTCTTCCBCCGGGG---SCHHHHHHHHTSCHHHHHHHTC
T ss_pred cCCCcccccCCceeeeEecCCCccccccccccccccCCCcccc---CCHHHHHHHhCCCHHHHHHHhc
Confidence 6544 2445554 278987 9999999999999999999975
No 28
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.86 E-value=2.5e-21 Score=179.54 Aligned_cols=139 Identities=20% Similarity=0.337 Sum_probs=115.3
Q ss_pred CCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCC----------c----
Q 042226 71 PLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPEN----------R---- 136 (216)
Q Consensus 71 ~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~----------~---- 136 (216)
..++.+... ..+.|+|+++|+++++++|.||++.+||||+ +.|++||++|+++++++.+++.+ +
T Consensus 28 se~G~~e~~-~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~-a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~ 105 (510)
T 3c3v_A 28 SEGGYIETW-NPNNQEFECAGVALSRLVLRRNALRRPFYSN-APQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQ 105 (510)
T ss_dssp ETTEEEEEC-CTTSHHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECCEEEEEECTTCCCCEEEECCC-------
T ss_pred cCCceEEEe-CCCCcccccCcEEEEEEEECCCCCccceecC-CCeEEEEEeCEEEEEEEeCCCccccccccccccccccc
Confidence 456655554 4555999999999999999999999999999 89999999999999999753100 0
Q ss_pred -------------------eEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEEEeCCCC--------ceeEee------
Q 042226 137 -------------------LITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISALSSQNP--------GVITIA------ 183 (216)
Q Consensus 137 -------------------~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~p--------g~~~~~------ 183 (216)
-..+.|++||+++||+|++||++|.|+++++++++++..++ ..+.++
T Consensus 106 ~~~~~~~~~~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~n~~nqld~~~r~F~LaG~~~~~ 185 (510)
T 3c3v_A 106 RPPRRLQEEDQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTNNNDNQLDQFPRRFNLAGNHEQE 185 (510)
T ss_dssp -------------CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTBTTCCSCSCCCCEESSCCCCCT
T ss_pred cccccccccccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCCCcccccccccceeEecCCcccc
Confidence 01378999999999999999999999999999999976542 223332
Q ss_pred ------------------------------------------------------hhhhcCCCCCCHHHHHHHcCCC-HHH
Q 042226 184 ------------------------------------------------------NAVFGSNPAIAADILAKAFQVD-KSV 208 (216)
Q Consensus 184 ------------------------------------------------------~~lf~~~p~~p~~vl~~af~~~-~~~ 208 (216)
.++|++ ++.++|+++|+++ .++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~sg---F~~~~La~af~v~~~~~ 262 (510)
T 3c3v_A 186 FLRYQQQSRQSRRRSLPYSPYSPQSQPRQEEREFSPRGQHSRRERAGQEEEHEGGNIFSG---FTPEFLAQAFQVDDRQI 262 (510)
T ss_dssp TGGGCC------------------------------------------------CCTGGG---SCHHHHHHHHTCCCHHH
T ss_pred cchhhhccccccccccccccccccccccccccccccccccccccccccccccccccceec---CCHHHHHHHhCCCHHHH
Confidence 268998 9999999999999 999
Q ss_pred HHHHhh
Q 042226 209 VDQLQT 214 (216)
Q Consensus 209 v~~l~~ 214 (216)
+++|++
T Consensus 263 ~~~l~~ 268 (510)
T 3c3v_A 263 VQNLRG 268 (510)
T ss_dssp HHHHTT
T ss_pred HHHhhc
Confidence 999975
No 29
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.85 E-value=2.5e-20 Score=165.30 Aligned_cols=148 Identities=16% Similarity=0.192 Sum_probs=125.0
Q ss_pred ccccccCCCCCccCCCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCc
Q 042226 57 FSFSGLHVAGNTENPLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENR 136 (216)
Q Consensus 57 F~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~ 136 (216)
|.|+....++. ...|+.++.++..++|.+.+ +++.++++.||+..++|||+++.|++||++|++++++++++ ++
T Consensus 21 ~~~~~~~~~~~--~~~~G~~~~~~~~~~p~~~~--~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~--g~ 94 (361)
T 2vqa_A 21 FTYAFSKTPLV--LYDGGTTKQVGTYNFPVSKG--MAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPE--GK 94 (361)
T ss_dssp SEECGGGSCCE--EETTEEEEEESTTTCTTCCS--CEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTT--SC
T ss_pred eEEEcccCCce--ecCCceEEEeChhhCccccc--eeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCC--Cc
Confidence 66776555433 24688899999999999874 58899999999999999999889999999999999998754 33
Q ss_pred eEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEEEeCCCCc---eeEeehhhhcCCCCCCHHHHHHHcCCCHHHHHHHh
Q 042226 137 LITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISALSSQNPG---VITIANAVFGSNPAIAADILAKAFQVDKSVVDQLQ 213 (216)
Q Consensus 137 ~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg---~~~~~~~lf~~~p~~p~~vl~~af~~~~~~v~~l~ 213 (216)
...+.|++||+++||+|.+|++.|.++++++++.+++..++. .+. ..++|+. +|.++|+++|+++.+.+++|+
T Consensus 95 ~~~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v~~~~~~~~~~~~~-~~~~~~~---~p~~vLa~~~~v~~~~~~~l~ 170 (361)
T 2vqa_A 95 VEIADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLVFNDGTFSEGATFS-VTDWLSH---TPIAWVEENLGWTAAQVAQLP 170 (361)
T ss_dssp EEEEEEETTEEEEECTTCEEEEEECSSSCEEEEEEESSTTCCTTSSEE-HHHHHHT---SCHHHHHHHHTCCHHHHTTSC
T ss_pred EEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCccccceec-HhHHHHh---CCHHHHHHHhCcCHHHHHhcc
Confidence 236899999999999999999999999999999999877664 344 3567887 999999999999999999886
Q ss_pred h
Q 042226 214 T 214 (216)
Q Consensus 214 ~ 214 (216)
+
T Consensus 171 ~ 171 (361)
T 2vqa_A 171 K 171 (361)
T ss_dssp S
T ss_pred c
Confidence 4
No 30
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.83 E-value=1.9e-20 Score=173.31 Aligned_cols=140 Identities=21% Similarity=0.355 Sum_probs=116.3
Q ss_pred CCCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCC--------------
Q 042226 70 NPLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPEN-------------- 135 (216)
Q Consensus 70 ~~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~-------------- 135 (216)
...|+.+...+ .++|+|+++|++++|++|.|+|+++||+|+ ++|++||++|++.++++.+....
T Consensus 27 ~se~G~~e~w~-~~~p~l~~~Gvs~~R~~i~p~Gl~lPh~~~-a~el~yV~qG~g~~G~v~Pgcpet~~~~~~~~~~~~~ 104 (531)
T 3fz3_A 27 QAEAGQIETWN-FNQGDFQCAGVAASRITIQRNGLHLPSYSN-APQLIYIVQGRGVLGAVFSGCPETFEESQQSSQQGRQ 104 (531)
T ss_dssp EETTEEEEECC-TTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTCCCCEECCCC-------
T ss_pred ccCCceEEEeC-CCChhhccCcceEEEEEecCCCEeCCccCC-CCeEEEEEECcEEEEEEcCCCcccccccccccccccc
Confidence 35567566555 679999999999999999999999999998 99999999999999998764100
Q ss_pred -----------------------------------------------------------------ceEEEEecCCcEEEE
Q 042226 136 -----------------------------------------------------------------RLITKVLQKGDVFVF 150 (216)
Q Consensus 136 -----------------------------------------------------------------~~~~~~L~~GDv~~~ 150 (216)
.-....+++||++.|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~vr~GDviai 184 (531)
T 3fz3_A 105 QEQEQERQQQQQGEQGRQQGQQEQQQERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFRQLDRHQKTRRIREGDVVAI 184 (531)
T ss_dssp ------------------------------------------------------------CCSCEESCCEEEETTEEEEE
T ss_pred ccccccccccccccccccccccccccccccccccchhccccccccccccccccccccccccccccceeeecccCCcEEEE
Confidence 011457899999999
Q ss_pred cCCCeEEEEECCCCcEEEEEEEeCCC--------CceeEee---------------------------------------
Q 042226 151 PIGLVHFQRNVGHGNAFSISALSSQN--------PGVITIA--------------------------------------- 183 (216)
Q Consensus 151 P~G~~H~~~N~g~~~a~~l~~~~s~~--------pg~~~~~--------------------------------------- 183 (216)
|+|+.||++|.|+++++++++++..| |..+.++
T Consensus 185 PaG~~~w~yN~G~~~l~iv~~~Dt~n~~NQld~~~r~F~LAGn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (531)
T 3fz3_A 185 PAGVAYWSYNDGDQELVAVNLFHVSSDHNQLDQNPRKFYLAGNPENEFNQQGQSQPRQQGEQGRPGQHQQPFGRPRQQEQ 264 (531)
T ss_dssp CTTCCEEEECCSSSCEEEEEEEETTCTTCCSCSSCCEEESSSCCCCTTCC------------------------------
T ss_pred CCCCeEEEEeCCCceEEEEEEEccccccccCCCccceeEEcCCCcccccccccccccccccccccccccccccccchhhh
Confidence 99999999999999999999995432 2222222
Q ss_pred ----hhhhcCCCCCCHHHHHHHcCCCHHHHHHHhh
Q 042226 184 ----NAVFGSNPAIAADILAKAFQVDKSVVDQLQT 214 (216)
Q Consensus 184 ----~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~ 214 (216)
.++|+. ++.++|+.||+++.++++||++
T Consensus 265 ~~~~~nifsG---Fs~e~La~A~~v~~~~a~kLq~ 296 (531)
T 3fz3_A 265 QGNGNNVFSG---FNTQLLAQALNVNEETARNLQG 296 (531)
T ss_dssp --CCSSGGGG---SCHHHHHHHHTSCHHHHHHHHT
T ss_pred cccCCCeeec---CCHHHHHHHHCCCHHHHHHHhc
Confidence 379998 9999999999999999999975
No 31
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.81 E-value=5.7e-19 Score=158.03 Aligned_cols=153 Identities=17% Similarity=0.234 Sum_probs=126.4
Q ss_pred cCCcccccccCCCCCccCCCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecC
Q 042226 53 QASHFSFSGLHVAGNTENPLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSN 132 (216)
Q Consensus 53 ~~~dF~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~ 132 (216)
.+..|+|+....++ .. ..++.++.+....+++.+ ++++.+++++||+..++|||+.+.|++||++|++++.+.+.+
T Consensus 222 ~~~~~v~~~~~~~~-~~-~~~g~~~~~~~~~~~~~~--~~~~~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~ 297 (385)
T 1j58_A 222 VPYPFTYRLLEQEP-IE-SEGGKVYIADSTNFKVSK--TIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASD 297 (385)
T ss_dssp CSSCSEEEGGGSCC-EE-CSSEEEEEESTTTSTTCC--SCEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEET
T ss_pred CCCCeeeecccCCC-ee-CCCceEEEeecccCCccc--ceEEEEEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcCC
Confidence 45678888765554 22 346677888877777644 468899999999999999999669999999999999987543
Q ss_pred CCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEEEeCCCCceeEeehhhhcCCCCCCHHHHHHHcCCCHHHHHHH
Q 042226 133 PENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISALSSQNPGVITIANAVFGSNPAIAADILAKAFQVDKSVVDQL 212 (216)
Q Consensus 133 ~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~~~lf~~~p~~p~~vl~~af~~~~~~v~~l 212 (216)
++-.++.|++||++++|+|..|++.|.|++++++++++....+....+.++ ++. +|.++++++|+++++++++|
T Consensus 298 --g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~~~~~~d~~~~~~-l~~---~~~~v~~~~f~~~~~~~~~l 371 (385)
T 1j58_A 298 --GHARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKDDHYADVSLNQW-LAM---LPETFVQAHLDLGKDFTDVL 371 (385)
T ss_dssp --TEEEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEEESSSSCCCEEHHHH-HHT---SCHHHHHHHHTCCHHHHTTC
T ss_pred --CcEEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEECCCCccccCHHHH-HHh---CCHHHHHHHhCCCHHHHHhh
Confidence 322478999999999999999999999999999999998877777766544 676 99999999999999999999
Q ss_pred hhc
Q 042226 213 QTK 215 (216)
Q Consensus 213 ~~~ 215 (216)
++.
T Consensus 372 ~~~ 374 (385)
T 1j58_A 372 SKE 374 (385)
T ss_dssp CSS
T ss_pred hcc
Confidence 764
No 32
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.79 E-value=7.2e-19 Score=157.38 Aligned_cols=147 Identities=20% Similarity=0.249 Sum_probs=122.4
Q ss_pred ccccccCCCCCccCCCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCc
Q 042226 57 FSFSGLHVAGNTENPLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENR 136 (216)
Q Consensus 57 F~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~ 136 (216)
+.|+........ ..|++++.++...+|+++ ++++.++++.||+..++|||+ +.|++||++|++++++++++ ++
T Consensus 48 ~~~~~~~~~~~~--~~~G~~~~~~~~~lp~~~--~~~~~~~~l~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~--g~ 120 (385)
T 1j58_A 48 MKFSFSDTHNRL--EKGGYAREVTVRELPISE--NLASVNMRLKPGAIRELHWHK-EAEWAYMIYGSARVTIVDEK--GR 120 (385)
T ss_dssp CEECGGGSCCEE--ETTEEEEEECTTTCTTCS--SCEEEEEEECTTCEEEEEEES-SCEEEEEEEEEEEEEEECTT--SC
T ss_pred eEEEcccCCccc--cCCcEEEEeccccCcccC--ceEEEEEEECCCCCCCCccCC-hheEEEEEeeeEEEEEEeCC--Cc
Confidence 666665444432 468889999999999988 678999999999999999999 89999999999999998754 45
Q ss_pred eEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEEEeCCCCcee--EeehhhhcCCCCCCHHHHHHHcCCCHHHHHHHhh
Q 042226 137 LITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISALSSQNPGVI--TIANAVFGSNPAIAADILAKAFQVDKSVVDQLQT 214 (216)
Q Consensus 137 ~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg~~--~~~~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~ 214 (216)
.+.+.|++||+++||+|.+|++.|.+ ++++++.+++...+... ....++|+. +|.++|+++|+++.++++++++
T Consensus 121 ~~~~~l~~GD~~~ip~g~~H~~~n~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~---~p~evla~~~~vs~~~~~~l~~ 196 (385)
T 1j58_A 121 SFIDDVGEGDLWYFPSGLPHSIQALE-EGAEFLLVFDDGSFSENSTFQLTDWLAH---TPKEVIAANFGVTKEEISNLPG 196 (385)
T ss_dssp EEEEEEETTEEEEECTTCCEEEEEEE-EEEEEEEEESCTTCCGGGEEEHHHHHHT---SCHHHHHHHHTCCTGGGTTSCS
T ss_pred EEEEEeCCCCEEEECCCCeEEEEECC-CCEEEEEEECCCCccccchhhhhhhhhc---ccHHHHHHHhCCCHHHHHhccc
Confidence 44569999999999999999999997 46899999987766532 123677887 9999999999999998888754
No 33
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=99.75 E-value=6e-19 Score=125.42 Aligned_cols=74 Identities=26% Similarity=0.269 Sum_probs=68.4
Q ss_pred cccccCCCCCccCCCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecC
Q 042226 58 SFSGLHVAGNTENPLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSN 132 (216)
Q Consensus 58 ~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~ 132 (216)
.|+.+++.+.++|..|. ++.+++.++|+|+++|+|++|+++.||++.+||||++++|++||++|++++++++++
T Consensus 3 pfnl~~~~p~~~n~~G~-~~~~~~~~~P~Ln~lgls~~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~V~~~ 76 (79)
T 1dgw_X 3 PFNLRSRDPIYSNNYGK-LYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLE 76 (79)
T ss_dssp CEETTSSCCSEECSSEE-EEEECTTTCHHHHTTTEEEEEEEECTTCEEEEEEESSCEEEEEEEESCEEEEEEEEC
T ss_pred ccccccCCCCccCCCCc-EEEEChhhCcccCcCCcceEEEEEcCCcCcCCccCCCCcEEEEEEeceEEEEEecCC
Confidence 37888888888877776 499999999999999999999999999999999999999999999999999999864
No 34
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.58 E-value=1.1e-14 Score=109.84 Aligned_cols=84 Identities=25% Similarity=0.293 Sum_probs=72.5
Q ss_pred ceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEE
Q 042226 91 GVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSIS 170 (216)
Q Consensus 91 gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 170 (216)
++.+.+++++||+..++|||+...|++||++|++++.+.+ ++ ...|++||++++|+|..|.+.|.+++++++++
T Consensus 38 ~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~----~~--~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~ 111 (125)
T 3h8u_A 38 DSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQGN----GI--VTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVS 111 (125)
T ss_dssp SCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEECST----TC--EEEEETTEEEEECTTCCCEEEECSSSCEEEEE
T ss_pred CEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEECC----Ce--EEEeCCCCEEEECCCCEEEeEeCCCCCEEEEE
Confidence 4678899999999999999996699999999999997622 33 68999999999999999999999999999999
Q ss_pred EEeCCCCcee
Q 042226 171 ALSSQNPGVI 180 (216)
Q Consensus 171 ~~~s~~pg~~ 180 (216)
++....++..
T Consensus 112 v~~p~~~~~~ 121 (125)
T 3h8u_A 112 VVAPGNAGFA 121 (125)
T ss_dssp EEESTTCCCC
T ss_pred EECCCcccch
Confidence 9876665543
No 35
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=99.54 E-value=2.5e-14 Score=121.18 Aligned_cols=117 Identities=15% Similarity=0.079 Sum_probs=85.2
Q ss_pred ccCCcccccccCCCCCccCCCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEE---
Q 042226 52 AQASHFSFSGLHVAGNTENPLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGF--- 128 (216)
Q Consensus 52 ~~~~dF~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~--- 128 (216)
-+.+||.+..+..+....++.|.....+.. ...+.++++.+++++||+..++|+|+++.|++||++|++++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~ 82 (239)
T 2xlg_A 7 HTFDDIPMPKLADPLLIYTPANEIFDIASC----SAKDIGFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTK 82 (239)
T ss_dssp CBCSCCCCCCCSSCEEEECTTCCEEEEEEE----EETTEEEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEE
T ss_pred cchhhCCCccccccceeecCCceEEEEecc----CCCCCCEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEec
Confidence 455666666554443333343333322221 2234467899999999999999999999999999999999987
Q ss_pred -----Eec-----CCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEE-EEEE
Q 042226 129 -----VTS-----NPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFS-ISAL 172 (216)
Q Consensus 129 -----~~~-----~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~-l~~~ 172 (216)
.+. .++++.+...+++||++++|+|.+|.+.|.+++++++ +..+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H~~~N~~~~~~~~~l~~~ 137 (239)
T 2xlg_A 83 QYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFVNPTDKTLPIVFVWM 137 (239)
T ss_dssp ECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEEEEEECCSSSCEEEEEEEE
T ss_pred ccccCCCcccccccccCceeEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEEE
Confidence 322 0113445789999999999999999999999999998 6666
No 36
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=99.53 E-value=7.3e-14 Score=110.38 Aligned_cols=85 Identities=19% Similarity=0.220 Sum_probs=73.2
Q ss_pred ceEEEEEEEcCCc-ccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCC-CeEEEEECCCCcEEE
Q 042226 91 GVSLARIDYAPWG-VVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIG-LVHFQRNVGHGNAFS 168 (216)
Q Consensus 91 gvs~~~~~l~pG~-~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G-~~H~~~N~g~~~a~~ 168 (216)
++.+.+++++||+ ..++|||+...|++||++|++++.+. ++ .+.|++||+++||+| ..|.+.|.+++++++
T Consensus 45 ~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~~-----~~--~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~ 117 (162)
T 3l2h_A 45 HMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTME-----ND--QYPIAPGDFVGFPCHAAAHSISNDGTETLVC 117 (162)
T ss_dssp SEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEET-----TE--EEEECTTCEEEECTTSCCEEEECCSSSCEEE
T ss_pred eEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEEC-----CE--EEEeCCCCEEEECCCCceEEeEeCCCCCEEE
Confidence 5688899999999 58999997689999999999999873 33 689999999999998 999999999999999
Q ss_pred EEEEeCCCCceeEe
Q 042226 169 ISALSSQNPGVITI 182 (216)
Q Consensus 169 l~~~~s~~pg~~~~ 182 (216)
+.+.....+....+
T Consensus 118 l~v~~p~~~~~~~~ 131 (162)
T 3l2h_A 118 LVIGQRLDQDVVDY 131 (162)
T ss_dssp EEEEECCSEEEEEE
T ss_pred EEEECCCCCCeEec
Confidence 99887665444444
No 37
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=99.52 E-value=1.2e-13 Score=109.44 Aligned_cols=116 Identities=17% Similarity=0.169 Sum_probs=83.9
Q ss_pred ceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCC--CCceEEEEecCCcEEEEcCCCeEEEEECC-CCcEE
Q 042226 91 GVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNP--ENRLITKVLQKGDVFVFPIGLVHFQRNVG-HGNAF 167 (216)
Q Consensus 91 gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~--~~~~~~~~L~~GDv~~~P~G~~H~~~N~g-~~~a~ 167 (216)
++.+.+++++||...++|+|+ ..|++||++|++++.+.+... .++.....+++||++++|+|..|...|.+ +++++
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~ 118 (163)
T 1lr5_A 40 EVEVWLQTISPGQRTPIHRHS-CEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQ 118 (163)
T ss_dssp SEEEEEEEECTTCBCCEEEES-SCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEE
T ss_pred cEEEEEEEECCCCcCCCeECC-CCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEE
Confidence 578888999999999999998 689999999999999865210 01123789999999999999999999999 89999
Q ss_pred EEEEEeCCCCceeEeehhhhcCCCCCCHHHHHHHcCCCHHHHHH
Q 042226 168 SISALSSQNPGVITIANAVFGSNPAIAADILAKAFQVDKSVVDQ 211 (216)
Q Consensus 168 ~l~~~~s~~pg~~~~~~~lf~~~p~~p~~vl~~af~~~~~~v~~ 211 (216)
+++++........... .+... +....+...+.++.+.+++
T Consensus 119 ~l~i~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~ 158 (163)
T 1lr5_A 119 VLVIISRPPAKIFLYD-DWSMP---HTAAVLKFPFVWDEDCFEA 158 (163)
T ss_dssp EEEEEESSSCCEEEES-STTSC---GGGCEEESSCTTTHHHHHH
T ss_pred EEEEECCCCccccccc-ccccC---CcCccceeccccccccccc
Confidence 9998865543333333 22222 3333344444555555544
No 38
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=99.51 E-value=5.4e-14 Score=102.24 Aligned_cols=78 Identities=18% Similarity=0.201 Sum_probs=67.7
Q ss_pred CceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEE
Q 042226 90 LGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSI 169 (216)
Q Consensus 90 ~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 169 (216)
..+.+.+++++||+..++|.|+...|++||++|++++.+.+ +. ....|++||++++|+|..|...|.|+++++++
T Consensus 16 ~~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~----g~-~~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l 90 (97)
T 2fqp_A 16 ERVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLETPE----GS-VTSQLTRGVSYTRPEGVEHNVINPSDTEFVFV 90 (97)
T ss_dssp SSEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEETT----EE-EEEEECTTCCEEECTTCEEEEECCSSSCEEEE
T ss_pred CeEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEEeCC----CC-EEEEEcCCCEEEeCCCCcccCEeCCCCcEEEE
Confidence 35788999999999999999996567999999999998742 11 26899999999999999999999999999988
Q ss_pred EEE
Q 042226 170 SAL 172 (216)
Q Consensus 170 ~~~ 172 (216)
.+-
T Consensus 91 ~v~ 93 (97)
T 2fqp_A 91 EIE 93 (97)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 39
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.49 E-value=1.9e-13 Score=98.54 Aligned_cols=79 Identities=19% Similarity=0.196 Sum_probs=69.7
Q ss_pred cCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEE
Q 042226 89 TLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFS 168 (216)
Q Consensus 89 ~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~ 168 (216)
+.++.+.++.++||...++|+|+...|++||++|++++.+. ++ ...+++||++++|+|..|...|.+++++++
T Consensus 25 ~~~~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~~-----~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~ 97 (105)
T 1v70_A 25 SERMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRVG-----EE--EALLAPGMAAFAPAGAPHGVRNESASPALL 97 (105)
T ss_dssp ETTEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEET-----TE--EEEECTTCEEEECTTSCEEEECCSSSCEEE
T ss_pred CCceEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEEC-----CE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEE
Confidence 34578899999999999999999668999999999999873 33 789999999999999999999999999999
Q ss_pred EEEEeC
Q 042226 169 ISALSS 174 (216)
Q Consensus 169 l~~~~s 174 (216)
+.+...
T Consensus 98 ~~v~~p 103 (105)
T 1v70_A 98 LVVTAP 103 (105)
T ss_dssp EEEEES
T ss_pred EEEeCC
Confidence 988753
No 40
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=99.49 E-value=9e-13 Score=105.52 Aligned_cols=117 Identities=15% Similarity=0.187 Sum_probs=86.9
Q ss_pred ccccCCcccccccCCCC---CccCCCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEE
Q 042226 50 KLAQASHFSFSGLHVAG---NTENPLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEV 126 (216)
Q Consensus 50 ~~~~~~dF~~~~~~~~~---~~~~~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~ 126 (216)
.-+..+++.+....... .-....|...+.+..... +....++.+.+++++||+..++|||+ ..|++||++|++++
T Consensus 12 ~iv~~~~~~W~~~~~~~~~~~~~~~~g~~~~~L~~~~~-g~~~~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~~ 89 (167)
T 3ibm_A 12 RVLRERDYRWEGTEEEAYKAEGTHFSGARRQTLVGRPA-GQEAPAFETRYFEVEPGGYTTLERHE-HTHVVMVVRGHAEV 89 (167)
T ss_dssp EEECEETTEETTCCCC---------CCEEEEEEECTTT-TCCSSSEEEEEEEECTTCBCCCBBCS-SCEEEEEEESEEEE
T ss_pred ceeecCCcccccceeeeccCCCCcCCCcEEEEEECCCC-CCCCCcEEEEEEEECCCCCCCCccCC-CcEEEEEEeCEEEE
Confidence 44556666666643211 001134555555543332 22345678999999999999999998 79999999999999
Q ss_pred EEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECC-CCcEEEEEEEeCC
Q 042226 127 GFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVG-HGNAFSISALSSQ 175 (216)
Q Consensus 127 ~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g-~~~a~~l~~~~s~ 175 (216)
.+. ++ .+.|++||+++||+|..|.+.|.+ +++++++++....
T Consensus 90 ~i~-----~~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 132 (167)
T 3ibm_A 90 VLD-----DR--VEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSD 132 (167)
T ss_dssp EET-----TE--EEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEESS
T ss_pred EEC-----CE--EEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeCC
Confidence 874 33 789999999999999999999999 9999999988654
No 41
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=99.47 E-value=5.6e-13 Score=104.08 Aligned_cols=85 Identities=18% Similarity=0.147 Sum_probs=71.1
Q ss_pred CceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEE
Q 042226 90 LGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSI 169 (216)
Q Consensus 90 ~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 169 (216)
.++.+.++.++||...++|||+...|++||++|++++.+.+... ...++..|++||+++||+|..|.+.|.++++++++
T Consensus 41 ~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~-~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l 119 (148)
T 2oa2_A 41 DHLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQD-NLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLY 119 (148)
T ss_dssp SSCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTT-BCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEE
T ss_pred CceEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCccc-cceeeEEECCCCEEEECCCCcEEEEECCCCCEEEE
Confidence 34678889999999999999997779999999999999865310 00123899999999999999999999999999999
Q ss_pred EEEeCC
Q 042226 170 SALSSQ 175 (216)
Q Consensus 170 ~~~~s~ 175 (216)
+++...
T Consensus 120 ~i~~~~ 125 (148)
T 2oa2_A 120 SIYAPP 125 (148)
T ss_dssp EEEESC
T ss_pred EEECCC
Confidence 887644
No 42
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=99.47 E-value=3.1e-13 Score=107.69 Aligned_cols=86 Identities=19% Similarity=0.128 Sum_probs=73.8
Q ss_pred CceEEEEEEEcCCccc-CCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCC--CeEEEEECCCCcE
Q 042226 90 LGVSLARIDYAPWGVV-PPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIG--LVHFQRNVGHGNA 166 (216)
Q Consensus 90 ~gvs~~~~~l~pG~~~-ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G--~~H~~~N~g~~~a 166 (216)
..+.+.+++++||+.. ++|||+..+|++||++|++++.+. ++ .+.|++||+++||+| ..|.+.|.+++++
T Consensus 41 ~~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~-----~~--~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~ 113 (163)
T 3i7d_A 41 SQFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDD-----QG--EHPMVPGDCAAFPAGDPNGHQFVNRTDAPA 113 (163)
T ss_dssp CSEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEET-----TE--EEEECTTCEEEECTTCCCCBEEECCSSSCE
T ss_pred CeEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEEC-----CE--EEEeCCCCEEEECCCCCcceEEEECCCCCE
Confidence 3578889999999965 899999667999999999999884 33 789999999999999 9999999999999
Q ss_pred EEEEEEeCCCCceeEe
Q 042226 167 FSISALSSQNPGVITI 182 (216)
Q Consensus 167 ~~l~~~~s~~pg~~~~ 182 (216)
+++.+..........+
T Consensus 114 ~~l~v~~p~~~d~~~y 129 (163)
T 3i7d_A 114 TFLVVGTRTPTETAYY 129 (163)
T ss_dssp EEEEEEECCSCEEEEE
T ss_pred EEEEEECCCCCCcccC
Confidence 9999987665544444
No 43
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=99.46 E-value=5e-14 Score=103.49 Aligned_cols=79 Identities=14% Similarity=0.162 Sum_probs=68.0
Q ss_pred cCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEE
Q 042226 89 TLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFS 168 (216)
Q Consensus 89 ~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~ 168 (216)
+-.+.+.|++++||+..++|+|+...|+.+|++|++++...+ ++.....+++||++++|+|..|...|.|++++++
T Consensus 14 n~~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~~d----~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~ 89 (98)
T 3lag_A 14 NDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPD----GTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVF 89 (98)
T ss_dssp SSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECTT----SCEECCCBCTTCCEEECTTCEEEEBCCSSSCEEE
T ss_pred CCeEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEeCC----CceEEEEecCCcEEEEcCCCcEECEECCCCeEEE
Confidence 345789999999999999999998789999999999987643 3333567999999999999999999999999999
Q ss_pred EEE
Q 042226 169 ISA 171 (216)
Q Consensus 169 l~~ 171 (216)
+.+
T Consensus 90 IeV 92 (98)
T 3lag_A 90 LEI 92 (98)
T ss_dssp EEE
T ss_pred EEE
Confidence 986
No 44
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=99.45 E-value=3.1e-13 Score=109.16 Aligned_cols=80 Identities=19% Similarity=0.242 Sum_probs=72.3
Q ss_pred CceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEE
Q 042226 90 LGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSI 169 (216)
Q Consensus 90 ~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 169 (216)
.|..+.+++++||+..++|.|+ ..|++||++|++++.+.+ ++ .+.|++||++ ||+|..|.+.|.|+++++++
T Consensus 77 ~G~~~~~v~l~PG~~~~~H~H~-~eE~~~VLeGel~l~ld~----ge--~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l 148 (172)
T 3es1_A 77 GGSVIRVVDMLPGKESPMHRTN-SIDYGIVLEGEIELELDD----GA--KRTVRQGGII-VQRGTNHLWRNTTDKPCRIA 148 (172)
T ss_dssp CSEEEEEEEECTTCBCCCBCCS-EEEEEEEEESCEEEECGG----GC--EEEECTTCEE-EECSCCBEEECCSSSCEEEE
T ss_pred CCeEEEEEEECCCCCCCCeecC-ceEEEEEEeCEEEEEECC----Ce--EEEECCCCEE-EeCCCcEEEEeCCCCCEEEE
Confidence 4788999999999999999998 789999999999998752 22 6899999999 99999999999999999999
Q ss_pred EEEeCCCC
Q 042226 170 SALSSQNP 177 (216)
Q Consensus 170 ~~~~s~~p 177 (216)
+++....|
T Consensus 149 ~V~~P~~p 156 (172)
T 3es1_A 149 FILIEAPA 156 (172)
T ss_dssp EEEEECCC
T ss_pred EEEcCCCc
Confidence 99987776
No 45
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=99.44 E-value=7.4e-13 Score=101.71 Aligned_cols=84 Identities=23% Similarity=0.272 Sum_probs=72.9
Q ss_pred CceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEE--EEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEE
Q 042226 90 LGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVG--FVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAF 167 (216)
Q Consensus 90 ~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~--~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~ 167 (216)
..+++.+++++||+..++|+|+ ..|++||++|++++. +. ++ ...+++||++++|+|..|...|.++++++
T Consensus 37 ~~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~~~~-----~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~ 108 (145)
T 3ht1_A 37 DRFVLTEFEVSPNGSTPPHFHE-WEHEIYVLEGSMGLVLPDQ-----GR--TEEVGPGEAIFIPRGEPHGFVTGPGQTCR 108 (145)
T ss_dssp CSEEEEEEEEEEEEECCCEECS-SCEEEEEEEECEEEEEGGG-----TE--EEEECTTCEEEECTTCCBEEECCTTCCEE
T ss_pred CcEEEEEEEECCCCcCCCccCC-CceEEEEEEeEEEEEEeEC-----CE--EEEECCCCEEEECCCCeEEeEcCCCCCEE
Confidence 3678899999999999999999 578889999999998 52 33 78999999999999999999999999999
Q ss_pred EEEEEeCCCCceeE
Q 042226 168 SISALSSQNPGVIT 181 (216)
Q Consensus 168 ~l~~~~s~~pg~~~ 181 (216)
++.+.....+....
T Consensus 109 ~l~i~~~~~~~~~~ 122 (145)
T 3ht1_A 109 FLVVAPCERPPVRN 122 (145)
T ss_dssp EEEEEESCCCCCEE
T ss_pred EEEEECCCCCCeeE
Confidence 99998766655443
No 46
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=99.44 E-value=9.2e-13 Score=96.61 Aligned_cols=78 Identities=24% Similarity=0.220 Sum_probs=69.4
Q ss_pred CceEEEEEEEcCCcccCCc--cCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEE
Q 042226 90 LGVSLARIDYAPWGVVPPH--VHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAF 167 (216)
Q Consensus 90 ~gvs~~~~~l~pG~~~ppH--~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~ 167 (216)
.++.+.+++++||...++| +|+...|++||++|++++.+. ++ ...+++||++++|+|..|.+.|.++++++
T Consensus 19 ~~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~~-----~~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~ 91 (113)
T 2gu9_A 19 RQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIVD-----GH--TQALQAGSLIAIERGQAHEIRNTGDTPLK 91 (113)
T ss_dssp TTEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEET-----TE--EEEECTTEEEEECTTCCEEEECCSSSCEE
T ss_pred CcEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEEC-----CE--EEEeCCCCEEEECCCCcEEeEcCCCCCEE
Confidence 4578899999999998888 998679999999999999873 33 68999999999999999999999999999
Q ss_pred EEEEEeC
Q 042226 168 SISALSS 174 (216)
Q Consensus 168 ~l~~~~s 174 (216)
++.++..
T Consensus 92 ~~~v~~~ 98 (113)
T 2gu9_A 92 TVNFYHP 98 (113)
T ss_dssp EEEEEES
T ss_pred EEEEECC
Confidence 9988754
No 47
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=99.44 E-value=2e-12 Score=105.55 Aligned_cols=83 Identities=17% Similarity=0.210 Sum_probs=72.5
Q ss_pred ceEEEEEEEcCCcc------cCCccCCC--ccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECC
Q 042226 91 GVSLARIDYAPWGV------VPPHVHPR--ATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVG 162 (216)
Q Consensus 91 gvs~~~~~l~pG~~------~ppH~Hp~--a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g 162 (216)
.+.+..++++||+. .++|+|+. ..|++||++|++.+.+.+.. ++.+...+++||++++|+|..|...|.|
T Consensus 66 ~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~--g~~~~~~l~~GD~v~ip~g~~H~~~N~g 143 (190)
T 1x82_A 66 DLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTPE--GDAKWISMEPGTVVYVPPYWAHRTVNIG 143 (190)
T ss_dssp CEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECTT--CCEEEEEECTTCEEEECTTCEEEEEECS
T ss_pred CeEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcCcC--CcEEEEEECCCcEEEECCCCeEEEEECC
Confidence 57788889999988 88999983 47999999999999987653 4556689999999999999999999999
Q ss_pred CCcEEEEEEEeCC
Q 042226 163 HGNAFSISALSSQ 175 (216)
Q Consensus 163 ~~~a~~l~~~~s~ 175 (216)
++++++++++...
T Consensus 144 ~~~~~~l~v~~~~ 156 (190)
T 1x82_A 144 DEPFIFLAIYPAD 156 (190)
T ss_dssp SSCEEEEEEEETT
T ss_pred cccEEEEEEECCC
Confidence 9999999988653
No 48
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.41 E-value=6.7e-13 Score=99.48 Aligned_cols=76 Identities=17% Similarity=0.282 Sum_probs=64.4
Q ss_pred cCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEE
Q 042226 89 TLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFS 168 (216)
Q Consensus 89 ~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~ 168 (216)
+.++.+.++.++||...++|||+ ..|++||++|++++.+. ++ .+.|++||++++|+|..|...|.++....+
T Consensus 33 ~~~~~v~~~~l~~G~~~~~H~H~-~~e~~~Vl~G~~~~~i~-----~~--~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~ 104 (114)
T 3fjs_A 33 EHRLEVMRMVLPAGKQVGSHSVA-GPSTIQCLEGEVEIGVD-----GA--QRRLHQGDLLYLGAGAAHDVNAITNTSLLV 104 (114)
T ss_dssp ETTEEEEEEEECTTCEEEEECCS-SCEEEEEEESCEEEEET-----TE--EEEECTTEEEEECTTCCEEEEESSSEEEEE
T ss_pred CCCEEEEEEEECCCCccCceeCC-CcEEEEEEECEEEEEEC-----CE--EEEECCCCEEEECCCCcEEEEeCCCcEEEE
Confidence 34678999999999999999999 58999999999999883 33 789999999999999999999987655544
Q ss_pred EEEE
Q 042226 169 ISAL 172 (216)
Q Consensus 169 l~~~ 172 (216)
+.++
T Consensus 105 ~~v~ 108 (114)
T 3fjs_A 105 TVVL 108 (114)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 4443
No 49
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=99.40 E-value=1.1e-12 Score=104.11 Aligned_cols=79 Identities=11% Similarity=0.056 Sum_probs=71.2
Q ss_pred CceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEE
Q 042226 90 LGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSI 169 (216)
Q Consensus 90 ~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 169 (216)
..+.+.+++++||+..++|+|+ ..|++||++|++++.+. ++ .+.+++||++++|+|..|...|.++++++++
T Consensus 42 ~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~v~v~-----g~--~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l 113 (156)
T 3kgz_A 42 LACEWRYFEVDEGGYSTLERHA-HVHAVMIHRGHGQCLVG-----ET--ISDVAQGDLVFIPPMTWHQFRANRGDCLGFL 113 (156)
T ss_dssp CSEEEEEEEEEEEEECCCBBCS-SCEEEEEEEEEEEEEET-----TE--EEEEETTCEEEECTTCCEEEECCSSSCEEEE
T ss_pred CcEEEEEEEECCCCccCceeCC-CcEEEEEEeCEEEEEEC-----CE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 5678889999999999999999 58999999999999873 33 7899999999999999999999999999999
Q ss_pred EEEeCCC
Q 042226 170 SALSSQN 176 (216)
Q Consensus 170 ~~~~s~~ 176 (216)
++++.+.
T Consensus 114 ~i~~~~~ 120 (156)
T 3kgz_A 114 CVVNAAR 120 (156)
T ss_dssp EEEESSC
T ss_pred EEEeCCC
Confidence 9987554
No 50
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=99.40 E-value=1e-12 Score=99.02 Aligned_cols=77 Identities=25% Similarity=0.431 Sum_probs=68.2
Q ss_pred CceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEE
Q 042226 90 LGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSI 169 (216)
Q Consensus 90 ~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 169 (216)
.++.+.++.++||...++|+|+ ..|++||++|++++.+. ++ ...+++||++++|+|..|...|.++ +++++
T Consensus 39 ~~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~~-----~~--~~~l~~Gd~~~ip~~~~H~~~~~~~-~~~~l 109 (126)
T 4e2g_A 39 KNLMLNWVRIEPNTEMPAHEHP-HEQAGVMLEGTLELTIG-----EE--TRVLRPGMAYTIPGGVRHRARTFED-GCLVL 109 (126)
T ss_dssp SSCEEEEEEECTTCEEEEECCS-SEEEEEEEEECEEEEET-----TE--EEEECTTEEEEECTTCCEEEECCTT-CEEEE
T ss_pred CCeEEEEEEECCCCcCCCccCC-CceEEEEEEeEEEEEEC-----CE--EEEeCCCCEEEECCCCcEEeEECCC-CEEEE
Confidence 3578999999999999999999 59999999999999873 33 6899999999999999999999987 88888
Q ss_pred EEEeCC
Q 042226 170 SALSSQ 175 (216)
Q Consensus 170 ~~~~s~ 175 (216)
.++...
T Consensus 110 ~v~~p~ 115 (126)
T 4e2g_A 110 DIFSPP 115 (126)
T ss_dssp EEEESC
T ss_pred EEECCC
Confidence 887643
No 51
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=99.40 E-value=2.6e-12 Score=104.25 Aligned_cols=83 Identities=17% Similarity=0.141 Sum_probs=69.7
Q ss_pred CCccCceEEEEEEEcCCcccC---CccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEEC-
Q 042226 86 GLNTLGVSLARIDYAPWGVVP---PHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNV- 161 (216)
Q Consensus 86 ~l~~~gvs~~~~~l~pG~~~p---pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~- 161 (216)
...+..+.+.+++++||+..+ +|+|+ ..|++||++|++++.+.+. +....+.|++||+++||++.+|.+.|.
T Consensus 111 ~~~~~~~~~~~~~~~pg~~~~~~~~h~h~-~~E~~~Vl~G~~~~~~~~~---~~~~~~~l~~GD~~~~~~~~~H~~~n~~ 186 (198)
T 2bnm_A 111 TKRAPSLVPLVVDVLTDNPDDAKFNSGHA-GNEFLFVLEGEIHMKWGDK---ENPKEALLPTGASMFVEEHVPHAFTAAK 186 (198)
T ss_dssp CTTSTTCEEEEEEECCCCGGGCCCCCCCS-SCEEEEEEESCEEEEESCT---TSCEEEEECTTCEEEECTTCCEEEEEST
T ss_pred CCCCCcceEEEEEEcCCCCCcccccccCC-CeEEEEEEeeeEEEEECCc---CCcccEEECCCCEEEeCCCCceEEEecC
Confidence 344556889999999998765 79999 5999999999999998541 111278999999999999999999999
Q ss_pred CCCcEEEEEEE
Q 042226 162 GHGNAFSISAL 172 (216)
Q Consensus 162 g~~~a~~l~~~ 172 (216)
+++++++++++
T Consensus 187 ~~~~~~~l~v~ 197 (198)
T 2bnm_A 187 GTGSAKLIAVN 197 (198)
T ss_dssp TSCCEEEEEEE
T ss_pred CCCCeEEEEEe
Confidence 99999998875
No 52
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.39 E-value=2e-12 Score=99.30 Aligned_cols=77 Identities=21% Similarity=0.203 Sum_probs=68.1
Q ss_pred cCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEE
Q 042226 89 TLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFS 168 (216)
Q Consensus 89 ~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~ 168 (216)
+..+.+.+++++||+..++|+|+...|++||++|++++.+. ++ .+.|++||++++|+|..|.+.|.+++++++
T Consensus 54 ~~~~~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~-----~~--~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~ 126 (133)
T 1o4t_A 54 NKARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHDN-----GK--DVPIKAGDVCFTDSGESHSIENTGNTDLEF 126 (133)
T ss_dssp TSEEEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEET-----TE--EEEEETTEEEEECTTCEEEEECCSSSCEEE
T ss_pred CceEEEEEEEECCCCccCceECCCccEEEEEEeCEEEEEEC-----CE--EEEeCCCcEEEECCCCcEEeEECCCCCEEE
Confidence 34567889999999999999998568999999999999873 33 789999999999999999999999999999
Q ss_pred EEEE
Q 042226 169 ISAL 172 (216)
Q Consensus 169 l~~~ 172 (216)
+++.
T Consensus 127 l~v~ 130 (133)
T 1o4t_A 127 LAVI 130 (133)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8765
No 53
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=99.39 E-value=1.5e-12 Score=104.31 Aligned_cols=78 Identities=13% Similarity=0.063 Sum_probs=70.5
Q ss_pred CceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEE
Q 042226 90 LGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSI 169 (216)
Q Consensus 90 ~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 169 (216)
.++.+.+++++||+..++|||+ ..|++||++|++++.+. ++ .+.+++||++++|+|..|.+.|.++++++++
T Consensus 51 ~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~~~v~-----g~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l 122 (166)
T 3jzv_A 51 LTGELRYFEVGPGGHSTLERHQ-HAHGVMILKGRGHAMVG-----RA--VSAVAPYDLVTIPGWSWHQFRAPADEALGFL 122 (166)
T ss_dssp CSEEEEEEEEEEEEECCCBBCS-SCEEEEEEEECEEEEET-----TE--EEEECTTCEEEECTTCCEEEECCTTSCEEEE
T ss_pred CeEEEEEEEECCCCccCceeCC-CcEEEEEEeCEEEEEEC-----CE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 5678889999999999999999 58999999999999873 33 7899999999999999999999999999999
Q ss_pred EEEeCC
Q 042226 170 SALSSQ 175 (216)
Q Consensus 170 ~~~~s~ 175 (216)
++....
T Consensus 123 ~i~~~~ 128 (166)
T 3jzv_A 123 CMVNAE 128 (166)
T ss_dssp EEEESS
T ss_pred EEEccC
Confidence 988754
No 54
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=99.38 E-value=2.3e-12 Score=96.05 Aligned_cols=74 Identities=14% Similarity=0.205 Sum_probs=65.6
Q ss_pred ceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEE-EecCCcEEEEcCCCeEEEEECCCCcEEEE
Q 042226 91 GVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITK-VLQKGDVFVFPIGLVHFQRNVGHGNAFSI 169 (216)
Q Consensus 91 gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~-~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 169 (216)
++.+.++.+.||...++|||+ ..|++||++|++++.+.+ + .. .+++||++++|+|..|...|.+++++.++
T Consensus 26 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~i~~-----~--~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l 97 (117)
T 2b8m_A 26 HVQINHIVLPRGEQMPKHYSN-SYVHLIIIKGEMTLTLED-----Q--EPHNYKEGNIVYVPFNVKMLIQNINSDILEFF 97 (117)
T ss_dssp SCEEEEEEEETTCBCCCEECS-SCEEEEEEESEEEEEETT-----S--CCEEEETTCEEEECTTCEEEEECCSSSEEEEE
T ss_pred ceEEEEEEECCCCcCCCEeCC-CcEEEEEEeCEEEEEECC-----E--EEEEeCCCCEEEECCCCcEEeEcCCCCCEEEE
Confidence 457788899999999999998 799999999999998742 2 45 99999999999999999999999999888
Q ss_pred EEE
Q 042226 170 SAL 172 (216)
Q Consensus 170 ~~~ 172 (216)
.+.
T Consensus 98 ~i~ 100 (117)
T 2b8m_A 98 VVK 100 (117)
T ss_dssp EEE
T ss_pred EEE
Confidence 774
No 55
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.37 E-value=9.3e-12 Score=97.31 Aligned_cols=98 Identities=22% Similarity=0.314 Sum_probs=78.1
Q ss_pred cCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEE-EEecCCcEEEEcCCCeEEEEECCCCcEE
Q 042226 89 TLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLIT-KVLQKGDVFVFPIGLVHFQRNVGHGNAF 167 (216)
Q Consensus 89 ~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~-~~L~~GDv~~~P~G~~H~~~N~g~~~a~ 167 (216)
..++.+.++.++||...++|+|+. .|++||++|++++.+.+ + . ..+++||++++|+|..|+..|.++++++
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~~-~E~~~Vl~G~~~~~~~~-----~--~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~ 116 (147)
T 2f4p_A 45 VFNTQVYDVVFEPGARTHWHSHPG-GQILIVTRGKGFYQERG-----K--PARILKKGDVVEIPPNVVHWHGAAPDEELV 116 (147)
T ss_dssp SSSCEEEEEEECTTCEECSEECTT-CEEEEEEEEEEEEEETT-----S--CCEEEETTCEEEECTTCCEEEEEBTTBCEE
T ss_pred CCcEEEEEEEECCCCccCceECCC-ceEEEEEeCEEEEEECC-----E--EEEEECCCCEEEECCCCcEEeEeCCCCCEE
Confidence 346789999999999999999994 99999999999998742 3 4 7999999999999999999999999999
Q ss_pred EEEEEeCCCCceeEeehhhhcCCCCCCHHHHHHH
Q 042226 168 SISALSSQNPGVITIANAVFGSNPAIAADILAKA 201 (216)
Q Consensus 168 ~l~~~~s~~pg~~~~~~~lf~~~p~~p~~vl~~a 201 (216)
++++......... .++.. +.++...++
T Consensus 117 ~l~v~~~~~~~~~----~wl~~---v~~e~~~~~ 143 (147)
T 2f4p_A 117 HIGISTQVHLGPA----EWLGS---VTEEEYRKA 143 (147)
T ss_dssp EEEEECCGGGCCC----EECCC---CCHHHHHHH
T ss_pred EEEEEccCCCCCc----eeccc---CCHHHhhhc
Confidence 9988765332211 23444 666655544
No 56
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=99.37 E-value=6.2e-13 Score=97.76 Aligned_cols=78 Identities=14% Similarity=0.167 Sum_probs=65.2
Q ss_pred ceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEE
Q 042226 91 GVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSIS 170 (216)
Q Consensus 91 gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 170 (216)
.+.+.+++++||+..++|.|+...+++|+++|++++...+ ++.....+++||++++|+|..|...|.|+++++++.
T Consensus 16 ~v~v~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~~~d----G~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~ 91 (98)
T 2ozi_A 16 EVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPD----GTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLE 91 (98)
T ss_dssp SEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECTT----SCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEEE
T ss_pred cEEEEEEEECCCCccCcEeCCCCEEEEEEeeEEEEEEeCC----CcEEEEEECCCCEEEECCCCceeCEECCCCCEEEEE
Confidence 5789999999999999999997667777789998886522 331246899999999999999999999999999998
Q ss_pred EE
Q 042226 171 AL 172 (216)
Q Consensus 171 ~~ 172 (216)
+-
T Consensus 92 vE 93 (98)
T 2ozi_A 92 IE 93 (98)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 57
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=99.35 E-value=8.2e-12 Score=94.22 Aligned_cols=76 Identities=18% Similarity=0.162 Sum_probs=67.6
Q ss_pred CceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEE
Q 042226 90 LGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSI 169 (216)
Q Consensus 90 ~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 169 (216)
..+.+.+.+++||...++|||+ ..|++||++|++++.+. ++ ...+++||++++|+|..|...|.+++++.++
T Consensus 32 ~~~~~~~~~~~pg~~~~~H~H~-~~Ei~~v~~G~~~~~i~-----~~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~ 103 (128)
T 4i4a_A 32 TPFGGAWCIVRPETKSFRHSHN-EYELFIVIQGNAIIRIN-----DE--DFPVTKGDLIIIPLDSEHHVINNNQEDFHFY 103 (128)
T ss_dssp CSSEEEEEEECTTEECCCBCCS-SEEEEEEEESEEEEEET-----TE--EEEEETTCEEEECTTCCEEEEECSSSCEEEE
T ss_pred CCcEEEEEEECCCCccCCEecC-CeEEEEEEeCEEEEEEC-----CE--EEEECCCcEEEECCCCcEEeEeCCCCCEEEE
Confidence 4577888999999999999997 79999999999999883 33 7899999999999999999999999998888
Q ss_pred EEEe
Q 042226 170 SALS 173 (216)
Q Consensus 170 ~~~~ 173 (216)
++.-
T Consensus 104 ~i~f 107 (128)
T 4i4a_A 104 TIWW 107 (128)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7653
No 58
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=99.35 E-value=4.3e-12 Score=94.07 Aligned_cols=76 Identities=22% Similarity=0.243 Sum_probs=66.3
Q ss_pred ceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEE
Q 042226 91 GVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSIS 170 (216)
Q Consensus 91 gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 170 (216)
++.+.+++++||...++|+|+ ..|++||++|++++.+. ++ ...+++||++++|+|..|...|.+ +++++.
T Consensus 33 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~~-----~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l~ 102 (116)
T 2pfw_A 33 ELMAVKIWFDKGAEGYVHAHR-HSQVSYVVEGEFHVNVD-----GV--IKVLTAGDSFFVPPHVDHGAVCPT--GGILID 102 (116)
T ss_dssp TEEEEEEEECTTEEEEEECCS-SEEEEEEEEECEEEEET-----TE--EEEECTTCEEEECTTCCEEEEESS--CEEEEE
T ss_pred ceEEEEEEECCCCcCCcEECC-cceEEEEEeeEEEEEEC-----CE--EEEeCCCCEEEECcCCceeeEeCC--CcEEEE
Confidence 478899999999999999999 79999999999999873 33 689999999999999999999987 678888
Q ss_pred EEeCCC
Q 042226 171 ALSSQN 176 (216)
Q Consensus 171 ~~~s~~ 176 (216)
++....
T Consensus 103 v~~p~~ 108 (116)
T 2pfw_A 103 TFSPAR 108 (116)
T ss_dssp EEESCC
T ss_pred EECCch
Confidence 876443
No 59
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=99.35 E-value=2.4e-12 Score=97.69 Aligned_cols=77 Identities=17% Similarity=0.193 Sum_probs=69.0
Q ss_pred cCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEE
Q 042226 89 TLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFS 168 (216)
Q Consensus 89 ~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~ 168 (216)
..++.+.+++++||...++|+|+ ..|++||++|++++.+. ++ ...+++||++++|+|..|...|.+++++++
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~i~-----~~--~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~ 116 (126)
T 1vj2_A 45 APNFVMRLFTVEPGGLIDRHSHP-WEHEIFVLKGKLTVLKE-----QG--EETVEEGFYIFVEPNEIHGFRNDTDSEVEF 116 (126)
T ss_dssp CSSEEEEEEEEEEEEEEEEECCS-SCEEEEEEESEEEEECS-----SC--EEEEETTEEEEECTTCCEEEECCSSSCEEE
T ss_pred CCCEEEEEEEECCCCcCCceeCC-CcEEEEEEEeEEEEEEC-----CE--EEEECCCCEEEECCCCcEEeEeCCCCCEEE
Confidence 45678999999999999999999 79999999999999874 23 689999999999999999999999999999
Q ss_pred EEEEe
Q 042226 169 ISALS 173 (216)
Q Consensus 169 l~~~~ 173 (216)
++++.
T Consensus 117 l~v~~ 121 (126)
T 1vj2_A 117 LCLIP 121 (126)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 88764
No 60
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=99.33 E-value=5.7e-12 Score=96.10 Aligned_cols=78 Identities=15% Similarity=0.143 Sum_probs=60.0
Q ss_pred eEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEE
Q 042226 92 VSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISA 171 (216)
Q Consensus 92 vs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~ 171 (216)
+.+.++.++||+..++|+|+...|++||++|++++.+.+ ++ ...+++||++++|+|..|.+.|.+++ ++++++
T Consensus 43 ~~~~~~~~~~g~~~~~H~H~~~~E~~~vl~G~~~~~~~~----~~--~~~l~~Gd~~~ip~g~~H~~~~~~~~-~~~l~~ 115 (134)
T 2o8q_A 43 AHVIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEYED----IG--AVMLEAGGSAFQPPGVRHRELRHSDD-LEVLEI 115 (134)
T ss_dssp EEEEEECC-----CCCEEECCSCEEEEEEESEEEEEETT----TE--EEEEETTCEEECCTTCCEEEEEECTT-CEEEEE
T ss_pred EEEEEEecCCCCCCCCEECCCCcEEEEEEeCEEEEEECC----cE--EEEecCCCEEEECCCCcEEeEeCCCC-eEEEEE
Confidence 356666677888899999996699999999999998842 13 78999999999999999999998774 677777
Q ss_pred EeCCC
Q 042226 172 LSSQN 176 (216)
Q Consensus 172 ~~s~~ 176 (216)
+....
T Consensus 116 ~~p~~ 120 (134)
T 2o8q_A 116 VSPAG 120 (134)
T ss_dssp ESSTT
T ss_pred ECCCc
Confidence 75444
No 61
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=99.32 E-value=6.4e-12 Score=94.80 Aligned_cols=80 Identities=15% Similarity=0.082 Sum_probs=66.6
Q ss_pred cCceEEEEEEEcCCcccC-CccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEE
Q 042226 89 TLGVSLARIDYAPWGVVP-PHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAF 167 (216)
Q Consensus 89 ~~gvs~~~~~l~pG~~~p-pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~ 167 (216)
..++.+.+..++||...+ +|+|+...+++||++|++++.+. ++ ...+++||++++|+|..|...|.++++++
T Consensus 23 ~~~~~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i~-----~~--~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~ 95 (125)
T 3cew_A 23 LTGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITID-----GE--KIELQAGDWLRIAPDGKRQISAASDSPIG 95 (125)
T ss_dssp CSSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEET-----TE--EEEEETTEEEEECTTCCEEEEEBTTBCEE
T ss_pred CCCcEEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEEC-----CE--EEEeCCCCEEEECCCCcEEEEcCCCCCEE
Confidence 445678888999999888 89999544455599999999873 33 68999999999999999999999999999
Q ss_pred EEEEEeCC
Q 042226 168 SISALSSQ 175 (216)
Q Consensus 168 ~l~~~~s~ 175 (216)
++++....
T Consensus 96 ~~~i~~~~ 103 (125)
T 3cew_A 96 FLCIQVKA 103 (125)
T ss_dssp EEEEEEET
T ss_pred EEEEEcCC
Confidence 88876543
No 62
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=99.31 E-value=1.2e-11 Score=91.47 Aligned_cols=74 Identities=16% Similarity=0.258 Sum_probs=63.7
Q ss_pred CceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEE
Q 042226 90 LGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSI 169 (216)
Q Consensus 90 ~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 169 (216)
.++.+.++.++||...++|+|+ ..|++||++|++++.+. ++ ...+++||++++|+|..|...|.+ +++++
T Consensus 38 ~~~~~~~~~~~~g~~~~~H~H~-~~e~~~vl~G~~~~~~~-----~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~~ 107 (115)
T 1yhf_A 38 QDLGITVFSLDKGQEIGRHSSP-GDAMVTILSGLAEITID-----QE--TYRVAEGQTIVMPAGIPHALYAVE--AFQML 107 (115)
T ss_dssp TTEEEEEEEECTTCEEEEECCS-SEEEEEEEESEEEEEET-----TE--EEEEETTCEEEECTTSCEEEEESS--CEEEE
T ss_pred CceEEEEEEECCCCccCCEECC-CcEEEEEEeCEEEEEEC-----CE--EEEECCCCEEEECCCCCEEEEECC--CceEE
Confidence 3568889999999999999999 69999999999999873 33 689999999999999999999987 46666
Q ss_pred EEEe
Q 042226 170 SALS 173 (216)
Q Consensus 170 ~~~~ 173 (216)
.++-
T Consensus 108 ~v~~ 111 (115)
T 1yhf_A 108 LVVV 111 (115)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6554
No 63
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=99.31 E-value=9.7e-12 Score=100.60 Aligned_cols=77 Identities=21% Similarity=0.203 Sum_probs=65.9
Q ss_pred ccCceEEEEEEEcCCcccC--CccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCc
Q 042226 88 NTLGVSLARIDYAPWGVVP--PHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGN 165 (216)
Q Consensus 88 ~~~gvs~~~~~l~pG~~~p--pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~ 165 (216)
.+..+.+.+++++||+..+ +|+|+ ..|++||++|++++.+. ++ .+.|++||+++||+|.+|.+.|.++++
T Consensus 100 ~~~~~~~~~~~~~pg~~~~~~~H~h~-~~E~~~Vl~G~~~~~~~-----~~--~~~l~~GD~i~i~~~~~H~~~n~~~~~ 171 (192)
T 1y9q_A 100 ADTGLEIFEITLLDHHQQMSSPHALG-VIEYIHVLEGIMKVFFD-----EQ--WHELQQGEHIRFFSDQPHGYAAVTEKA 171 (192)
T ss_dssp TTTTEEEEEEEECTTCEEEECCCSTT-CEEEEEEEESCEEEEET-----TE--EEEECTTCEEEEECSSSEEEEESSSCE
T ss_pred CCCcEEEEEEEECCCCCccCCCCCCC-CEEEEEEEEeEEEEEEC-----CE--EEEeCCCCEEEEcCCCCeEeECCCCCc
Confidence 3456788999999998765 78777 69999999999999873 33 689999999999999999999999999
Q ss_pred EEEEEEEe
Q 042226 166 AFSISALS 173 (216)
Q Consensus 166 a~~l~~~~ 173 (216)
+ ++.++.
T Consensus 172 ~-~l~v~~ 178 (192)
T 1y9q_A 172 V-FQNIVA 178 (192)
T ss_dssp E-EEEEEE
T ss_pred E-EEEEEe
Confidence 9 777664
No 64
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=99.31 E-value=8.4e-12 Score=100.14 Aligned_cols=74 Identities=19% Similarity=0.106 Sum_probs=64.6
Q ss_pred eEEEEEEEcC-CcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEE
Q 042226 92 VSLARIDYAP-WGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSIS 170 (216)
Q Consensus 92 vs~~~~~l~p-G~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 170 (216)
+...+++++| |+...+|.|..+.|++||++|++.+.+. ++ .+.|++||+++||+|..|.+.|.++++++++.
T Consensus 88 ~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl~-----g~--~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll~ 160 (166)
T 2vpv_A 88 FASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTVC-----KN--KFLSVKGSTFQIPAFNEYAIANRGNDEAKMFF 160 (166)
T ss_dssp CEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEET-----TE--EEEEETTCEEEECTTCEEEEEECSSSCEEEEE
T ss_pred ceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEEC-----CE--EEEEcCCCEEEECCCCCEEEEECCCCCEEEEE
Confidence 5677899999 7776666566689999999999999984 33 78999999999999999999999999999987
Q ss_pred EE
Q 042226 171 AL 172 (216)
Q Consensus 171 ~~ 172 (216)
+.
T Consensus 161 Vq 162 (166)
T 2vpv_A 161 VQ 162 (166)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 65
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.29 E-value=9.7e-12 Score=105.76 Aligned_cols=78 Identities=13% Similarity=0.046 Sum_probs=66.7
Q ss_pred cCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCC-CcEE
Q 042226 89 TLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGH-GNAF 167 (216)
Q Consensus 89 ~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~-~~a~ 167 (216)
...+.+.+++++||+..++|+|+...|++||++|++++.+. ++ .+.|++||++++|+|..|.+.|.|+ ++++
T Consensus 176 ~~~~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~-----~~--~~~l~~GD~i~~~~~~~H~~~n~g~~~~~~ 248 (261)
T 1rc6_A 176 GFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLD-----NN--WIPVKKGDYIFMGAYSLQAGYGVGRGEAFS 248 (261)
T ss_dssp TCSEEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEESS-----SC--EEEEETTCEEEECSSEEEEEEEC----CEE
T ss_pred CCceEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEEC-----CE--EEEeCCCCEEEECCCCcEEeEeCCCCcCEE
Confidence 44678899999999999999998789999999999999874 23 7899999999999999999999999 9999
Q ss_pred EEEEEe
Q 042226 168 SISALS 173 (216)
Q Consensus 168 ~l~~~~ 173 (216)
++...+
T Consensus 249 ~l~~~d 254 (261)
T 1rc6_A 249 YIYSKD 254 (261)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 987654
No 66
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.28 E-value=1.3e-11 Score=104.10 Aligned_cols=78 Identities=18% Similarity=0.127 Sum_probs=68.8
Q ss_pred eEEEEEEEcC-CcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEE
Q 042226 92 VSLARIDYAP-WGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSIS 170 (216)
Q Consensus 92 vs~~~~~l~p-G~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 170 (216)
+.+..++++| |+..++|||+ ..|++||++|++++.+. ++ ...+++||++++|+|..|...|.|+++++++.
T Consensus 145 ~~~~~~~~~p~g~~~~~H~H~-~~e~~~Vl~G~~~~~i~-----~~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~ 216 (243)
T 3h7j_A 145 VEIMLAKIPGNGGEMPFHKHR-NEQIGICIGGGYDMTVE-----GC--TVEMKFGTAYFCEPREDHGAINRSEKESKSIN 216 (243)
T ss_dssp EEEEEEEECTTTEEEEEECCS-SEEEEEECSSCEEEEET-----TE--EEEECTTCEEEECTTCCEEEEECSSSCEEEEE
T ss_pred eEEEEEEECCCCCcCCCEeCC-CcEEEEEEECEEEEEEC-----CE--EEEECCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 5667788999 8889999999 68999999999999874 33 67899999999999999999999999999999
Q ss_pred EEeCCCC
Q 042226 171 ALSSQNP 177 (216)
Q Consensus 171 ~~~s~~p 177 (216)
++.....
T Consensus 217 v~~p~~~ 223 (243)
T 3h7j_A 217 IFFPPRY 223 (243)
T ss_dssp EEESCSS
T ss_pred EEcCChh
Confidence 9975443
No 67
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=99.25 E-value=3.5e-11 Score=87.91 Aligned_cols=76 Identities=21% Similarity=0.242 Sum_probs=62.9
Q ss_pred CceEEEEEEEcCCcccCCccCCCccEE-EEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEE
Q 042226 90 LGVSLARIDYAPWGVVPPHVHPRATEI-LTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFS 168 (216)
Q Consensus 90 ~gvs~~~~~l~pG~~~ppH~Hp~a~Ei-~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~ 168 (216)
.++.+.++.+.||...++|+|+...|+ +||++|++++.+.+ ++ ...+++||++++|+|..|...|.++ +.+
T Consensus 31 ~~~~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~~~----~~--~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~ 102 (110)
T 2q30_A 31 ENFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVGDG----DA--VIPAPRGAVLVAPISTPHGVRAVTD--MKV 102 (110)
T ss_dssp SSCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEECGG----GC--EEEECTTEEEEEETTSCEEEEESSS--EEE
T ss_pred CCEEEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEeCC----CE--EEEECCCCEEEeCCCCcEEEEEcCC--cEE
Confidence 356788899999999999999954788 89999999998741 12 6899999999999999999999865 556
Q ss_pred EEEEe
Q 042226 169 ISALS 173 (216)
Q Consensus 169 l~~~~ 173 (216)
+.++.
T Consensus 103 l~~~~ 107 (110)
T 2q30_A 103 LVTIA 107 (110)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 66654
No 68
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=99.23 E-value=5.6e-11 Score=88.07 Aligned_cols=72 Identities=15% Similarity=0.185 Sum_probs=61.4
Q ss_pred eEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEE
Q 042226 92 VSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISA 171 (216)
Q Consensus 92 vs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~ 171 (216)
+.+..+.+.||...++|+|+ ..|++||++|++++.+. ++ .+.|++||++++|+|.+|...|. ++++++.+
T Consensus 38 ~~~~~~~~~~g~~~~~H~h~-~~e~~~vl~G~~~~~i~-----~~--~~~l~~Gd~i~i~~~~~H~~~~~--~~~~~~~i 107 (114)
T 2ozj_A 38 VQISLFSFADGESVSEEEYF-GDTLYLILQGEAVITFD-----DQ--KIDLVPEDVLMVPAHKIHAIAGK--GRFKMLQI 107 (114)
T ss_dssp EEEEEEEEETTSSCCCBCCS-SCEEEEEEEEEEEEEET-----TE--EEEECTTCEEEECTTCCBEEEEE--EEEEEEEE
T ss_pred ceEEEEEECCCCccccEECC-CCeEEEEEeCEEEEEEC-----CE--EEEecCCCEEEECCCCcEEEEeC--CCcEEEEE
Confidence 56777788999999999999 69999999999999883 33 78999999999999999999996 46677665
Q ss_pred Ee
Q 042226 172 LS 173 (216)
Q Consensus 172 ~~ 173 (216)
..
T Consensus 108 ~~ 109 (114)
T 2ozj_A 108 TL 109 (114)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 69
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.22 E-value=9e-11 Score=100.56 Aligned_cols=90 Identities=11% Similarity=0.060 Sum_probs=73.6
Q ss_pred CCceEEEeeccCCCCCccCceEEEEEEEcCCcccCC-ccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEE
Q 042226 72 LGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPP-HVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVF 150 (216)
Q Consensus 72 ~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~pp-H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~ 150 (216)
.|...+.+.. ...+..+.+.+++++||+..+. |+|+ ..|++||++|++++.+. ++ .+.|++||+++|
T Consensus 166 ~g~~~~~l~~----~~~~~~~~~~~~~l~pg~~~~~~H~H~-~~E~~yVl~G~~~~~i~-----~~--~~~l~~GD~i~i 233 (274)
T 1sef_A 166 TDVLLWSLLP----KEFDFDMNMHILSFEPGASHAYIETHV-QEHGAYLISGQGMYNLD-----NE--WYPVEKGDYIFM 233 (274)
T ss_dssp TTEEEEECSC----SSTTCSEEEEEEEECTTCBCSSCBCCS-CCEEEEEEECEEEEEET-----TE--EEEEETTCEEEE
T ss_pred CCeEEEEeCC----cccCCCEEEEEEEECCCCccCcceecc-CeEEEEEEeCEEEEEEC-----CE--EEEECCCCEEEE
Confidence 4555554432 2233467889999999998888 9998 68999999999999884 33 689999999999
Q ss_pred cCCCeEEEEECCC-CcEEEEEEEe
Q 042226 151 PIGLVHFQRNVGH-GNAFSISALS 173 (216)
Q Consensus 151 P~G~~H~~~N~g~-~~a~~l~~~~ 173 (216)
|++.+|...|.++ +++++++..+
T Consensus 234 ~~~~~H~~~n~~~~~~~~~l~~~~ 257 (274)
T 1sef_A 234 SAYVPQAAYAVGREEPLMYVYSKD 257 (274)
T ss_dssp CTTCCEEEEEECSSSCEEEEEEEE
T ss_pred CCCCCEEEEeCCCCCCEEEEEEEc
Confidence 9999999999999 9999887743
No 70
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.20 E-value=7.5e-11 Score=102.68 Aligned_cols=78 Identities=23% Similarity=0.238 Sum_probs=68.8
Q ss_pred CceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEE
Q 042226 90 LGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSI 169 (216)
Q Consensus 90 ~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 169 (216)
..+++.++.+.||+..++|||++..|++||++|++++.+. ++ .+.|++||++++|+|..|.+.|.++ +++++
T Consensus 44 ~~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~~-----~~--~~~l~~Gd~~~~p~~~~H~~~n~~~-~~~~~ 115 (337)
T 1y3t_A 44 DLFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTLD-----GE--RYLLISGDYANIPAGTPHSYRMQSH-RTRLV 115 (337)
T ss_dssp SSEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEET-----TE--EEEECTTCEEEECTTCCEEEEECST-TEEEE
T ss_pred CeEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEEC-----CE--EEEECCCCEEEECCCCcEEEEECCC-CeEEE
Confidence 3578899999999999999999789999999999999873 33 6899999999999999999999987 68888
Q ss_pred EEEeCC
Q 042226 170 SALSSQ 175 (216)
Q Consensus 170 ~~~~s~ 175 (216)
.++...
T Consensus 116 ~~~~p~ 121 (337)
T 1y3t_A 116 SYTMKG 121 (337)
T ss_dssp EEEETT
T ss_pred EEECCC
Confidence 887654
No 71
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.16 E-value=1e-10 Score=88.62 Aligned_cols=74 Identities=19% Similarity=0.226 Sum_probs=61.4
Q ss_pred CceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEE
Q 042226 90 LGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSI 169 (216)
Q Consensus 90 ~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 169 (216)
..+++..++++||...++| ....|++||++|++++.+. ++ ...|++||+++||+|..|.+.|.+ ++++++
T Consensus 38 ~~~~~~~~~~~pG~~~~~H--~~~~E~~~Vl~G~~~~~~~-----g~--~~~l~~GD~v~ip~g~~H~~~~~~-~~~~~l 107 (119)
T 3lwc_A 38 GPITIGYGRYAPGQSLTET--MAVDDVMIVLEGRLSVSTD-----GE--TVTAGPGEIVYMPKGETVTIRSHE-EGALTA 107 (119)
T ss_dssp CCCEEEEEEECTTCEEEEE--CSSEEEEEEEEEEEEEEET-----TE--EEEECTTCEEEECTTCEEEEEEEE-EEEEEE
T ss_pred CCEEEEEEEECCCCCcCcc--CCCCEEEEEEeCEEEEEEC-----CE--EEEECCCCEEEECCCCEEEEEcCC-CCeEEE
Confidence 3578889999999876555 4589999999999999883 33 689999999999999999998875 677777
Q ss_pred EEEe
Q 042226 170 SALS 173 (216)
Q Consensus 170 ~~~~ 173 (216)
.+..
T Consensus 108 ~v~~ 111 (119)
T 3lwc_A 108 YVTY 111 (119)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 7664
No 72
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.16 E-value=1.1e-10 Score=100.64 Aligned_cols=76 Identities=22% Similarity=0.190 Sum_probs=67.1
Q ss_pred CceEEEEEEEcCCccc--CCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEE
Q 042226 90 LGVSLARIDYAPWGVV--PPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAF 167 (216)
Q Consensus 90 ~gvs~~~~~l~pG~~~--ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~ 167 (216)
..+.+.+++++||+.. +.|.|+ ..|++||++|++++.+.+ + ++.|++||.++||+|..|.+.|.|+++++
T Consensus 66 ~~~~~~~~~l~PG~~~~~~~h~H~-~eE~~~Vl~G~l~v~v~g-----~--~~~L~~GD~i~ip~~~~H~~~N~g~~~~~ 137 (278)
T 1sq4_A 66 ETFSQYIVELAPNGGSDKPEQDPN-AEAVLFVVEGELSLTLQG-----Q--VHAMQPGGYAFIPPGADYKVRNTTGQHTR 137 (278)
T ss_dssp CSCEEEEEEEEEEEEESSCCCCTT-EEEEEEEEESCEEEEESS-----C--EEEECTTEEEEECTTCCEEEECCSSSCEE
T ss_pred CcEEEEEEEECCCCccCCCCcCCC-ceEEEEEEeCEEEEEECC-----E--EEEECCCCEEEECCCCcEEEEECCCCCEE
Confidence 4578999999999876 567787 799999999999998843 3 68999999999999999999999999999
Q ss_pred EEEEEe
Q 042226 168 SISALS 173 (216)
Q Consensus 168 ~l~~~~ 173 (216)
++.+..
T Consensus 138 ~l~v~~ 143 (278)
T 1sq4_A 138 FHWIRK 143 (278)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 998874
No 73
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.16 E-value=8.3e-11 Score=99.05 Aligned_cols=73 Identities=21% Similarity=0.191 Sum_probs=65.1
Q ss_pred EEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEE-EcCCCeEEEEECCCCcEEEEEE
Q 042226 93 SLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFV-FPIGLVHFQRNVGHGNAFSISA 171 (216)
Q Consensus 93 s~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~-~P~G~~H~~~N~g~~~a~~l~~ 171 (216)
.+.+..++||...++|||+ ..|++||++|++++.+. ++ ...|++||.++ +|+|..|...|.++++++++.+
T Consensus 35 ~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~~~-----~~--~~~l~~Gd~i~~ip~~~~H~~~n~~~~~~~~l~i 106 (243)
T 3h7j_A 35 EVLMSYVPPHTNVEPHQHK-EVQIGMVVSGELMMTVG-----DV--TRKMTALESAYIAPPHVPHGARNDTDQEVIAIDI 106 (243)
T ss_dssp EEEEEEECTTEEEEEECCS-SEEEEEEEESEEEEEET-----TE--EEEEETTTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred EEEEEEECCCCccCCEECC-CcEEEEEEEeEEEEEEC-----CE--EEEECCCCEEEEcCCCCcEeeEeCCCCcEEEEEE
Confidence 5677789999999999999 79999999999999873 33 68999999995 9999999999999999999887
Q ss_pred Ee
Q 042226 172 LS 173 (216)
Q Consensus 172 ~~ 173 (216)
..
T Consensus 107 ~r 108 (243)
T 3h7j_A 107 KR 108 (243)
T ss_dssp EE
T ss_pred ec
Confidence 54
No 74
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=99.16 E-value=2.8e-10 Score=96.14 Aligned_cols=77 Identities=14% Similarity=0.169 Sum_probs=67.5
Q ss_pred cCceEEEEEEEcCCcccCC-ccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEE
Q 042226 89 TLGVSLARIDYAPWGVVPP-HVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAF 167 (216)
Q Consensus 89 ~~gvs~~~~~l~pG~~~pp-H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~ 167 (216)
+..+.+.+++++||+..+. |.|. .+|.+||++|++.+.+. ++ .+.|++||+++++++.+|++.|.|+++++
T Consensus 162 ~~~~~~~~~tl~PG~~~~~~~~h~-~ee~~~vLeG~~~~~~~-----~~--~~~l~~GD~~~~~~~~pH~~~n~g~~~~~ 233 (246)
T 1sfn_A 162 AFDFMVSTMSFAPGASLPYAEVHY-MEHGLLMLEGEGLYKLE-----EN--YYPVTAGDIIWMGAHCPQWYGALGRNWSK 233 (246)
T ss_dssp TCSEEEEEEEECTTCBCSSCBCCS-SCEEEEEEECEEEEEET-----TE--EEEEETTCEEEECTTCCEEEEEESSSCEE
T ss_pred CCCeEEEEEEECCCCccCcccCCC-ceEEEEEEECEEEEEEC-----CE--EEEcCCCCEEEECCCCCEEEEcCCCCCEE
Confidence 5578899999999999887 5565 78999999999999874 33 68999999999999999999999999999
Q ss_pred EEEEEe
Q 042226 168 SISALS 173 (216)
Q Consensus 168 ~l~~~~ 173 (216)
++..-+
T Consensus 234 yl~~kd 239 (246)
T 1sfn_A 234 YLLYKD 239 (246)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 987654
No 75
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.14 E-value=8.2e-11 Score=104.70 Aligned_cols=77 Identities=19% Similarity=0.219 Sum_probs=67.8
Q ss_pred CceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEE
Q 042226 90 LGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSI 169 (216)
Q Consensus 90 ~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 169 (216)
..+.+....++||+..++|+|+ ..|++||++|++++..++ ++ ...+++||++++|+|..|...|.++++++++
T Consensus 98 ~~l~~~~~~l~PG~~~~~H~H~-~~e~~yVl~G~g~~t~v~----g~--~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l 170 (354)
T 2d40_A 98 ATLYAGLQLIMPGEVAPSHRHN-QSALRFIVEGKGAFTAVD----GE--RTPMNEGDFILTPQWRWHDHGNPGDEPVIWL 170 (354)
T ss_dssp SSCEEEEEEECTTCEEEEEEES-SCEEEEEEECSSCEEEET----TE--EEECCTTCEEEECTTSCEEEECCSSSCEEEE
T ss_pred CcEEEEEEEECCCCCcCCeecC-cceEEEEEEEEEEEEEEC----CE--EEEEcCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 3578899999999999999998 689999999999884443 33 6899999999999999999999999999998
Q ss_pred EEEe
Q 042226 170 SALS 173 (216)
Q Consensus 170 ~~~~ 173 (216)
.+.+
T Consensus 171 ~v~d 174 (354)
T 2d40_A 171 DGLD 174 (354)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 8864
No 76
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=99.14 E-value=3.9e-10 Score=100.05 Aligned_cols=80 Identities=21% Similarity=0.245 Sum_probs=63.7
Q ss_pred eEEEEEEEcCCc-ccC--CccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEE
Q 042226 92 VSLARIDYAPWG-VVP--PHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFS 168 (216)
Q Consensus 92 vs~~~~~l~pG~-~~p--pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~ 168 (216)
+++. ..+.|++ ..+ +|+|++..|++||++|++++.+.+.+ ++...+.|++||+++||+|.+|.+.|.++++ ++
T Consensus 48 ~~~~-~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~--g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~-~~ 123 (350)
T 1juh_A 48 FTLM-GTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGN--ETQQTRVLSSGDYGSVPRNVTHTFQIQDPDT-EM 123 (350)
T ss_dssp CEEE-EEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEETT--SCCEEEEEETTCEEEECTTEEEEEEECSTTE-EE
T ss_pred EEEE-EEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEECCcC--CceEEEEECCCCEEEECCCCcEEEEeCCCCC-EE
Confidence 4555 4455555 455 89999889999999999999987632 2224789999999999999999999999876 77
Q ss_pred EEEEeCC
Q 042226 169 ISALSSQ 175 (216)
Q Consensus 169 l~~~~s~ 175 (216)
+.++...
T Consensus 124 l~v~~p~ 130 (350)
T 1juh_A 124 TGVIVPG 130 (350)
T ss_dssp EEEEESS
T ss_pred EEEEcCc
Confidence 7777543
No 77
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=99.13 E-value=1.2e-10 Score=85.41 Aligned_cols=69 Identities=17% Similarity=0.239 Sum_probs=53.9
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISA 171 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~ 171 (216)
..++.+.||. .++|+|+...|++||++|++++.+.+ ++ ...+++||++++|+|..|...|. ++++++.+
T Consensus 30 ~~~~~~~~g~-~~~H~H~~~~E~~~Vl~G~~~~~~~~----~~--~~~l~~Gd~~~ip~~~~H~~~~~--~~~~~l~i 98 (107)
T 2i45_A 30 QFHLVKLLGD-YGWHTHGYSDKVLFAVEGDMAVDFAD----GG--SMTIREGEMAVVPKSVSHRPRSE--NGCSLVLI 98 (107)
T ss_dssp EEEEEEEEEE-CCCBCC--CCEEEEESSSCEEEEETT----SC--EEEECTTEEEEECTTCCEEEEEE--EEEEEEEE
T ss_pred EEEEEECCCC-CcceeCCCCCEEEEEEeCEEEEEECC----Cc--EEEECCCCEEEECCCCcEeeEeC--CCeEEEEE
Confidence 4556677776 56999995599999999999998743 13 68999999999999999999995 45666644
No 78
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.13 E-value=2.4e-10 Score=101.73 Aligned_cols=89 Identities=18% Similarity=0.044 Sum_probs=73.2
Q ss_pred CCceEEEeec-cCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEE
Q 042226 72 LGSRVTPVTV-AQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVF 150 (216)
Q Consensus 72 ~g~~~~~~~~-~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~ 150 (216)
.|+.+..++. ...+.+.+++. ....++||...++|||+. +|++||++|++++.+. ++ +..+++||++++
T Consensus 249 ~G~~~~~~np~t~~~~~~ti~~--~~~~l~pG~~~~~H~h~~-~ev~~v~~G~g~~~v~-----~~--~~~~~~GD~~~v 318 (354)
T 2d40_A 249 DGYKMRYVNPVTGGYPMPSMGA--FLQLLPKGFASRVARTTD-STIYHVVEGSGQVIIG-----NE--TFSFSAKDIFVV 318 (354)
T ss_dssp TBEEEEECCTTTSSCSSSSCEE--EEEEECTTCBCCCBEESS-CEEEEEEEEEEEEEET-----TE--EEEEETTCEEEE
T ss_pred CCeEEEEeCCCcCCCCCCccee--EEEEECCCCCCCceecCC-cEEEEEEeCeEEEEEC-----CE--EEEEcCCCEEEE
Confidence 4667888774 35667777654 455899999999999995 5999999999999983 33 789999999999
Q ss_pred cCCCeEEEEECCCCcEEEEEEE
Q 042226 151 PIGLVHFQRNVGHGNAFSISAL 172 (216)
Q Consensus 151 P~G~~H~~~N~g~~~a~~l~~~ 172 (216)
|++..|.+.|. ++++++++.
T Consensus 319 P~~~~H~~~n~--e~~~l~~~~ 338 (354)
T 2d40_A 319 PTWHGVSFQTT--QDSVLFSFS 338 (354)
T ss_dssp CTTCCEEEEEE--EEEEEEEEE
T ss_pred CCCCeEEEEeC--CCEEEEEEc
Confidence 99999999994 778888764
No 79
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=99.13 E-value=3.6e-10 Score=84.31 Aligned_cols=75 Identities=23% Similarity=0.288 Sum_probs=58.7
Q ss_pred CceEEEEEEEcCCcccCC---ccCCCccEEEEEEeCeEEEEEEecCCCCceEE--EEecCCcEEEEcCCCeEEEEECCCC
Q 042226 90 LGVSLARIDYAPWGVVPP---HVHPRATEILTVIEGSLEVGFVTSNPENRLIT--KVLQKGDVFVFPIGLVHFQRNVGHG 164 (216)
Q Consensus 90 ~gvs~~~~~l~pG~~~pp---H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~--~~L~~GDv~~~P~G~~H~~~N~g~~ 164 (216)
.++.+.++. .+|...++ |.|+ ..|++||++|++++.+.+ + . ..|++||+++||+|..|...|.+++
T Consensus 29 ~~~~i~~i~-~~g~~~~~~~~~~~~-~~E~~~Vl~G~~~l~~~~-----~--~~~~~l~~Gd~i~ipa~~~H~~~n~~~~ 99 (112)
T 2opk_A 29 KGLKIERII-SNGQASPPGFWYDSP-QDEWVMVVSGSAGIECEG-----D--TAPRVMRPGDWLHVPAHCRHRVAWTDGG 99 (112)
T ss_dssp TTEEEEEEE-ESSCCCCTTCCBCCS-SEEEEEEEESCEEEEETT-----C--SSCEEECTTEEEEECTTCCEEEEEECSS
T ss_pred CCEEEEEEE-eCCccCCCCccccCC-ccEEEEEEeCeEEEEECC-----E--EEEEEECCCCEEEECCCCcEEEEeCCCC
Confidence 355677764 45655554 4455 799999999999998843 2 4 7999999999999999999999976
Q ss_pred -cEEEEEEEe
Q 042226 165 -NAFSISALS 173 (216)
Q Consensus 165 -~a~~l~~~~ 173 (216)
++++++++.
T Consensus 100 ~~~~~l~v~~ 109 (112)
T 2opk_A 100 EPTVWLAVHC 109 (112)
T ss_dssp SCEEEEEEEE
T ss_pred CCEEEEEEEE
Confidence 677777764
No 80
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.13 E-value=1.6e-10 Score=98.24 Aligned_cols=77 Identities=14% Similarity=0.050 Sum_probs=66.2
Q ss_pred CceEEEEEEEcCCcccCCccC-CCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEE
Q 042226 90 LGVSLARIDYAPWGVVPPHVH-PRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFS 168 (216)
Q Consensus 90 ~gvs~~~~~l~pG~~~ppH~H-p~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~ 168 (216)
..+.+.+++++||+....|.| +..+|++||++|++++.+. ++ .+.|++||+++||++.+|.+.|.+++++++
T Consensus 57 ~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~-----~~--~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~ 129 (261)
T 1rc6_A 57 ASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAE-----GK--TFALSEGGYLYCPPGSLMTFVNAQAEDSQI 129 (261)
T ss_dssp CSSEEEEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEET-----TE--EEEEETTEEEEECTTCCCEEEECSSSCEEE
T ss_pred CcEEEEEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEEC-----CE--EEEECCCCEEEECCCCCEEEEeCCCCCEEE
Confidence 356788999999987766554 4568899999999999883 33 789999999999999999999999999999
Q ss_pred EEEEe
Q 042226 169 ISALS 173 (216)
Q Consensus 169 l~~~~ 173 (216)
+.+..
T Consensus 130 l~v~~ 134 (261)
T 1rc6_A 130 FLYKR 134 (261)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99874
No 81
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.13 E-value=5.7e-10 Score=97.05 Aligned_cols=75 Identities=21% Similarity=0.219 Sum_probs=63.1
Q ss_pred EEEEEEcC-CcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEEE
Q 042226 94 LARIDYAP-WGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISAL 172 (216)
Q Consensus 94 ~~~~~l~p-G~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~ 172 (216)
...+.+.| |...++|||+.+.|++||++|++++.+. ++ .+.|++||++++|++..|++.|.++ +++++.++
T Consensus 219 ~~~~~~~p~g~~~~~h~H~~~~e~~~vl~G~~~~~i~-----~~--~~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v~ 290 (337)
T 1y3t_A 219 IVVSSEGPKGDRIVDHYHEYHTETFYCLEGQMTMWTD-----GQ--EIQLNPGDFLHVPANTVHSYRLDSH-YTKMVGVL 290 (337)
T ss_dssp EEEEEEECSCCCCCCEECSSCEEEEEEEESCEEEEET-----TE--EEEECTTCEEEECTTCCEEEEECSS-SEEEEEEE
T ss_pred EEEEEEcCCCCCCCCcCCCCCcEEEEEEeCEEEEEEC-----CE--EEEECCCCEEEECCCCeEEEEECCC-CeEEEEEE
Confidence 34455656 5678999999779999999999999883 33 7899999999999999999999998 89999988
Q ss_pred eCCC
Q 042226 173 SSQN 176 (216)
Q Consensus 173 ~s~~ 176 (216)
+...
T Consensus 291 ~~~~ 294 (337)
T 1y3t_A 291 VPGL 294 (337)
T ss_dssp ESST
T ss_pred cCcc
Confidence 6543
No 82
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.11 E-value=4.8e-10 Score=96.19 Aligned_cols=107 Identities=12% Similarity=0.051 Sum_probs=80.6
Q ss_pred CCccccCCcccccccCCCCCccCCCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEE
Q 042226 48 DPKLAQASHFSFSGLHVAGNTENPLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVG 127 (216)
Q Consensus 48 ~~~~~~~~dF~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~ 127 (216)
+.+.++.+|++.+.+ |+ -.|..++.+-.... +-.+.+.+++++||+..+.|.|. ++|++||++|++++.
T Consensus 36 ~~avI~~~~iv~s~l--Pg----~~~~~~~vL~sP~~----G~~f~~~lv~l~PGg~s~~~~h~-~EEfiyVleG~l~l~ 104 (266)
T 4e2q_A 36 DHALITPESHVYSPL--PD----WTNTLGAYLITPAT----GSHFVMYLAKMKEMSSSGLPPQD-IERLIFVVEGAVTLT 104 (266)
T ss_dssp SEEEECGGGCCCEEC--TT----SSSEEEEEEECGGG----TCSSEEEEEEECSSEECCCCCTT-EEEEEEEEEECEEEE
T ss_pred CeEEECccceEEeeC--CC----CcCEEEEEEcCCCC----CCcEEEEEEEECcCCcCCCCCCC-CeEEEEEEEEEEEEE
Confidence 345666788888764 22 23445555443332 23578999999999988888776 899999999999998
Q ss_pred EEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEEEe
Q 042226 128 FVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISALS 173 (216)
Q Consensus 128 ~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~ 173 (216)
+.+ ++ +++|++||.++||++..|.+.|. ++++++.+..
T Consensus 105 l~~----g~--~~~L~~Gds~y~p~~~~H~~~N~--~~Ar~l~V~k 142 (266)
T 4e2q_A 105 NTS----SS--SKKLTVDSYAYLPPNFHHSLDCV--ESATLVVFER 142 (266)
T ss_dssp C------CC--CEEECTTEEEEECTTCCCEEEES--SCEEEEEEEE
T ss_pred ECC----Cc--EEEEcCCCEEEECCCCCEEEEeC--CCEEEEEEEe
Confidence 852 22 68999999999999999999995 6888888764
No 83
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=99.09 E-value=2.1e-10 Score=88.57 Aligned_cols=71 Identities=18% Similarity=0.105 Sum_probs=59.7
Q ss_pred ceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEE
Q 042226 91 GVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSIS 170 (216)
Q Consensus 91 gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 170 (216)
.+++.+++++|| ..|||....|++||++|++++.+. ++ .+.|++||+++||+|..|.+.| .++++++.
T Consensus 56 ~~~~~~~~~~pG---~~~~h~~~~E~~~VLeG~~~l~~~-----g~--~~~l~~GD~i~~p~g~~h~~~~--~~~~~~l~ 123 (133)
T 2pyt_A 56 SMAAGFMQWDNA---FFPWTLNYDEIDMVLEGELHVRHE-----GE--TMIAKAGDVMFIPKGSSIEFGT--PTSVRFLY 123 (133)
T ss_dssp SSEEEEEEEEEE---EEEEECSSEEEEEEEEEEEEEEET-----TE--EEEEETTCEEEECTTCEEEEEE--EEEEEEEE
T ss_pred cEEEEEEEECCC---CccccCCCCEEEEEEECEEEEEEC-----CE--EEEECCCcEEEECCCCEEEEEe--CCCEEEEE
Confidence 578888999999 356776689999999999999874 33 6799999999999999999987 46788887
Q ss_pred EEe
Q 042226 171 ALS 173 (216)
Q Consensus 171 ~~~ 173 (216)
+..
T Consensus 124 v~~ 126 (133)
T 2pyt_A 124 VAW 126 (133)
T ss_dssp EEE
T ss_pred EEc
Confidence 764
No 84
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=99.09 E-value=3.5e-10 Score=81.39 Aligned_cols=70 Identities=26% Similarity=0.478 Sum_probs=54.1
Q ss_pred ccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEE
Q 042226 88 NTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAF 167 (216)
Q Consensus 88 ~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~ 167 (216)
++..+.+.++. +..++|+|+...|++||++|++++.+. ++ ...+++||++++|+|..|...|.+ ++.
T Consensus 29 ~~~~~~~~~~~----~~~~~H~H~~~~e~~~v~~G~~~~~~~-----~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~ 95 (102)
T 3d82_A 29 NDYQFKLVKVE----GEFVWHEHADTDEVFIVMEGTLQIAFR-----DQ--NITLQAGEMYVIPKGVEHKPMAKE--ECK 95 (102)
T ss_dssp TTEEEEEEEEE----EECCCBCCTTCCEEEEEEESEEEEECS-----SC--EEEEETTEEEEECTTCCBEEEEEE--EEE
T ss_pred CCCEEEEEEEC----CCCCceeCCCCcEEEEEEeCEEEEEEC-----CE--EEEEcCCCEEEECCCCeEeeEcCC--CCE
Confidence 33344444443 458999999659999999999999874 23 689999999999999999999974 455
Q ss_pred EEE
Q 042226 168 SIS 170 (216)
Q Consensus 168 ~l~ 170 (216)
++.
T Consensus 96 ~l~ 98 (102)
T 3d82_A 96 IMI 98 (102)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 85
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.08 E-value=3.4e-10 Score=94.42 Aligned_cols=73 Identities=18% Similarity=0.282 Sum_probs=63.2
Q ss_pred ceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEE
Q 042226 91 GVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSIS 170 (216)
Q Consensus 91 gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 170 (216)
.+++.++.++||...++|+|+ ..|++||++|++++.+. ++ .+.+++||.+++|+|.+|+..|. .++++++.
T Consensus 152 ~~~~~~~~~~~G~~~~~H~H~-~~e~~~Vl~G~~~~~i~-----g~--~~~l~~Gd~i~ip~~~~H~~~~~-~~~~~~ll 222 (227)
T 3rns_A 152 NLVMTIMSFWKGESLDPHKAP-GDALVTVLDGEGKYYVD-----GK--PFIVKKGESAVLPANIPHAVEAE-TENFKMLL 222 (227)
T ss_dssp TEEEEEEEECTTCEEEEECCS-SEEEEEEEEEEEEEEET-----TE--EEEEETTEEEEECTTSCEEEECC-SSCEEEEE
T ss_pred CeEEEEEEECCCCccCCEECC-CcEEEEEEeEEEEEEEC-----CE--EEEECCCCEEEECCCCcEEEEeC-CCCEEEEE
Confidence 468889999999999999999 68999999999999874 33 78999999999999999999983 56677766
Q ss_pred EE
Q 042226 171 AL 172 (216)
Q Consensus 171 ~~ 172 (216)
++
T Consensus 223 ~~ 224 (227)
T 3rns_A 223 IL 224 (227)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 86
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=99.08 E-value=4.3e-10 Score=93.44 Aligned_cols=78 Identities=14% Similarity=0.095 Sum_probs=68.6
Q ss_pred ccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEE
Q 042226 88 NTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAF 167 (216)
Q Consensus 88 ~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~ 167 (216)
....+.+..+.++||...|.|.|+ .+|+.||++|++++.+.+ ++ .+.+++||++++|+|..|.+. ++++|+.
T Consensus 128 ~s~~l~lG~v~l~PG~~yP~HsHp-~EEiy~VLsG~~e~~v~~----g~--~~~l~pGd~v~ipsgv~Ha~r-t~dePll 199 (217)
T 4b29_A 128 LTQSLRVTVGYWGPGLDYGWHEHL-PEELYSVVSGRALFHLRN----AP--DLMLEPGQTRFHPANAPHAMT-TLTDPIL 199 (217)
T ss_dssp ECSSCEEEEEEECSSCEEEEEECS-SEEEEEEEEECEEEEETT----SC--CEEECTTCEEEECTTCCEEEE-CCSSCEE
T ss_pred CCCeEEEEEEEECCCCcCCCCCCC-CceEEEEEeCCEEEEECC----CC--EEecCCCCEEEcCCCCceeEE-ECCccEE
Confidence 445688999999999999999999 799999999999998853 22 689999999999999999997 5889998
Q ss_pred EEEEEe
Q 042226 168 SISALS 173 (216)
Q Consensus 168 ~l~~~~ 173 (216)
.+.+..
T Consensus 200 alwvW~ 205 (217)
T 4b29_A 200 TLVLWR 205 (217)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 888775
No 87
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=99.08 E-value=8.7e-10 Score=87.52 Aligned_cols=71 Identities=21% Similarity=0.186 Sum_probs=58.2
Q ss_pred eEEEEEEEcCCcccCCccCCCccEEEEEEe--CeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEE
Q 042226 92 VSLARIDYAPWGVVPPHVHPRATEILTVIE--GSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSI 169 (216)
Q Consensus 92 vs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~--G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 169 (216)
+++.++++ +...++|||+...|++||++ |++++.+. ++ .+.+++||+++||+|..|.+. + +++++
T Consensus 47 ~sv~~v~~--g~~~~~H~H~~~~E~~yVLe~~G~g~v~id-----ge--~~~l~~GD~v~IPpg~~H~i~--g--~l~~L 113 (157)
T 4h7l_A 47 VSVHYTQI--TKAARTHYHREHQEIYVVLDHAAHATIELN-----GQ--SYPLTKLLAISIPPLVRHRIV--G--EATII 113 (157)
T ss_dssp CEEEEEEE--CSCCCCBBCSSCEEEEEEEEECTTCEEEET-----TE--EEECCTTEEEEECTTCCEEEE--S--CEEEE
T ss_pred EEEEEEeC--CCCccceECCCCcEEEEEEecCcEEEEEEC-----CE--EEEeCCCCEEEECCCCeEeeE--C--CEEEE
Confidence 45665555 44568999997889999999 99999883 33 689999999999999999997 2 69999
Q ss_pred EEEeCC
Q 042226 170 SALSSQ 175 (216)
Q Consensus 170 ~~~~s~ 175 (216)
+++...
T Consensus 114 ~I~~Pp 119 (157)
T 4h7l_A 114 NIVSPP 119 (157)
T ss_dssp EEEESS
T ss_pred EEECCC
Confidence 987643
No 88
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.08 E-value=1.2e-09 Score=93.63 Aligned_cols=87 Identities=14% Similarity=0.136 Sum_probs=72.1
Q ss_pred CceEEEeeccCCCCCccCceEEEEEEEcCCcccCC-ccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEc
Q 042226 73 GSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPP-HVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFP 151 (216)
Q Consensus 73 g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~pp-H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P 151 (216)
+...+.+...+. ...+.+.+++++||+..+. |.|. .+|.+||++|++.+.+. ++ .+.+++||+++++
T Consensus 171 ~~~~r~l~p~~~----~~d~~~~~~t~~PG~~~p~~e~H~-~eh~~~vL~G~g~y~l~-----~~--~~~V~~GD~i~~~ 238 (266)
T 4e2q_A 171 VFELRKLLPMSV----AYDFNIHTMDFQPGEFLNVKEVHY-NQHGLLLLEGQGIYRLG-----DN--WYPVQAGDVIWMA 238 (266)
T ss_dssp CSEEEESSCCST----TCSEEEEEEEECTTCBCSSCCCCS-CCEEEEEEECEEEEEET-----TE--EEEEETTCEEEEC
T ss_pred cEEEEEccCccc----ccceEEEEEEECCCcCcCCceEcc-cceEEEEEeceEEEEEC-----CE--EEEecCCCEEEEC
Confidence 344555544442 5567899999999999996 7777 68999999999999874 33 7899999999999
Q ss_pred CCCeEEEEECCCCcEEEEEE
Q 042226 152 IGLVHFQRNVGHGNAFSISA 171 (216)
Q Consensus 152 ~G~~H~~~N~g~~~a~~l~~ 171 (216)
++.+|++.|.|+++++++.-
T Consensus 239 ~~~~h~~~n~G~e~~~yl~y 258 (266)
T 4e2q_A 239 PFVPQWYAALGKTRSRYLLY 258 (266)
T ss_dssp TTCCEEEEEESSSCEEEEEE
T ss_pred CCCcEEEEeCCCCCEEEEEE
Confidence 99999999999999999864
No 89
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.07 E-value=3.7e-10 Score=96.73 Aligned_cols=77 Identities=14% Similarity=0.081 Sum_probs=65.7
Q ss_pred CceEEEEEEEcCCcccCCcc-CCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEE
Q 042226 90 LGVSLARIDYAPWGVVPPHV-HPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFS 168 (216)
Q Consensus 90 ~gvs~~~~~l~pG~~~ppH~-Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~ 168 (216)
..+.+.+++++||+....|. |+..+|++||++|++++.+. ++ ++.|++||.++||++.+|.+.|.+++++++
T Consensus 60 ~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~-----~~--~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~ 132 (274)
T 1sef_A 60 ATFVDYIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSDG-----QE--THELEAGGYAYFTPEMKMYLANAQEADTEV 132 (274)
T ss_dssp CSSEEEEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEECS-----SC--EEEEETTEEEEECTTSCCEEEESSSSCEEE
T ss_pred CcEEEEEEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEEC-----CE--EEEECCCCEEEECCCCCEEEEeCCCCCEEE
Confidence 35678899999998766554 45568999999999999874 23 789999999999999999999999999999
Q ss_pred EEEEe
Q 042226 169 ISALS 173 (216)
Q Consensus 169 l~~~~ 173 (216)
+.+..
T Consensus 133 l~v~~ 137 (274)
T 1sef_A 133 FLYKK 137 (274)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 98873
No 90
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.06 E-value=8.3e-10 Score=99.56 Aligned_cols=78 Identities=17% Similarity=0.066 Sum_probs=69.0
Q ss_pred cCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEE-CCCCcEE
Q 042226 89 TLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRN-VGHGNAF 167 (216)
Q Consensus 89 ~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N-~g~~~a~ 167 (216)
+..+.+....+.||...++|.|. .+|+.||++|++.+..++ ++ +..+++||++++|+|..|...| .|+++++
T Consensus 120 t~~L~a~~~~l~PG~~~~~HrH~-~~ev~~IleG~G~~t~v~----G~--~~~~~~GD~i~~P~g~~H~~~N~~gde~l~ 192 (394)
T 3bu7_A 120 CGWLFSGIQTMKAGERAGAHRHA-ASALRFIMEGSGAYTIVD----GH--KVELGANDFVLTPNGTWHEHGILESGTECI 192 (394)
T ss_dssp BTTBEEEEEEECTTCBCCCEEES-SCEEEEEEECSCEEEEET----TE--EEEECTTCEEEECTTCCEEEEECTTCCCEE
T ss_pred CCeeEEEEEEECCCCCcCCccCC-cceEEEEEEeeEEEEEEC----CE--EEEEcCCCEEEECcCCCEEEEcCCCCCCEE
Confidence 45688999999999999999999 579999999999764443 34 7899999999999999999999 9999999
Q ss_pred EEEEEe
Q 042226 168 SISALS 173 (216)
Q Consensus 168 ~l~~~~ 173 (216)
++++.+
T Consensus 193 ~l~v~d 198 (394)
T 3bu7_A 193 WQDGLD 198 (394)
T ss_dssp EEEEEC
T ss_pred EEEccc
Confidence 998774
No 91
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=99.05 E-value=4.2e-10 Score=100.57 Aligned_cols=78 Identities=21% Similarity=0.164 Sum_probs=68.3
Q ss_pred cCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEE
Q 042226 89 TLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFS 168 (216)
Q Consensus 89 ~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~ 168 (216)
+-.+.+....+.||...++|.|. .+|+.||++|++.+..++ ++ +..+++||++++|+|..|...|.|++++++
T Consensus 100 t~~L~a~~~~l~PG~~~~~HrH~-~~ev~~VleG~G~~~~vd----G~--~~~~~~GD~v~iP~g~~H~~~N~gde~l~~ 172 (368)
T 3nw4_A 100 SPTMWAAIQYLGPRETAPEHRHS-QNAFRFVVEGEGVWTVVN----GD--PVRMSRGDLLLTPGWCFHGHMNDTDQPMAW 172 (368)
T ss_dssp SSSCEEEEEEECTTCEEEEEEES-SCEEEECSSCEEEEEEET----TE--EEEEETTCEEEECTTCCEEEEECSSSCEEE
T ss_pred CCceEEEEEEECCCCccCceecc-cceEEEEEecceEEEEEC----CE--EEEEeCCCEEEECCCCcEEeEeCCCCCeEE
Confidence 34678999999999999999999 689999999999533332 33 789999999999999999999999999999
Q ss_pred EEEEe
Q 042226 169 ISALS 173 (216)
Q Consensus 169 l~~~~ 173 (216)
+.+++
T Consensus 173 l~v~D 177 (368)
T 3nw4_A 173 IDGLD 177 (368)
T ss_dssp EEEEC
T ss_pred EEecc
Confidence 99885
No 92
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.05 E-value=1.1e-09 Score=94.28 Aligned_cols=82 Identities=16% Similarity=0.096 Sum_probs=70.6
Q ss_pred CCCCccCceEEEEEEEcCCcccCC-ccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECC
Q 042226 84 IPGLNTLGVSLARIDYAPWGVVPP-HVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVG 162 (216)
Q Consensus 84 ~P~l~~~gvs~~~~~l~pG~~~pp-H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g 162 (216)
.|.-....+.+.+++++||+..+. |.|. .+|.+||++|++.+.+. ++ .+.|++||+++++.+..|.+.|.|
T Consensus 183 ~p~~~~~~~~~~~~~l~pG~~i~~~~~h~-~e~~~~il~G~~~~~~~-----~~--~~~v~~GD~~~~~~~~~h~~~n~g 254 (278)
T 1sq4_A 183 DMSDMRHDMHVNIVNFEPGGVIPFAETHV-MEHGLYVLEGKAVYRLN-----QD--WVEVEAGDFMWLRAFCPQACYSGG 254 (278)
T ss_dssp CTTCTTCSEEEEEEEECSSSEESCCCCCS-EEEEEEEEECEEEEEET-----TE--EEEEETTCEEEEEESCCEEEECCS
T ss_pred cCCCcCCCeEEEEEEECCCCCcCCCCCCC-ccEEEEEEeCEEEEEEC-----CE--EEEeCCCCEEEECCCCCEEEEcCC
Confidence 343345678999999999999997 4555 68999999999999874 33 789999999999999999999999
Q ss_pred CCcEEEEEEEe
Q 042226 163 HGNAFSISALS 173 (216)
Q Consensus 163 ~~~a~~l~~~~ 173 (216)
+++++++.+.+
T Consensus 255 ~~~~~yl~~~d 265 (278)
T 1sq4_A 255 PGRFRYLLYKD 265 (278)
T ss_dssp SSCEEEEEEEE
T ss_pred CCCEEEEEEEE
Confidence 99999999886
No 93
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.04 E-value=2.5e-09 Score=96.43 Aligned_cols=92 Identities=17% Similarity=0.081 Sum_probs=73.5
Q ss_pred CceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcC
Q 042226 73 GSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPI 152 (216)
Q Consensus 73 g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~ 152 (216)
|..+..++... .+-....+.+....++||...++|.|. ..|++||++|++++.+. ++ +..+++||++++|+
T Consensus 276 ~~~l~l~nP~~-g~~~~~tl~~~~~~l~PG~~~~~HrH~-~~~v~~VleG~G~~~V~-----ge--~~~~~~GD~~~iP~ 346 (394)
T 3bu7_A 276 GLILRYTNPQT-GGHPMLTMGASMQMLRPGEHTKAHRHT-GNVIYNVAKGQGYSIVG-----GK--RFDWSEHDIFCVPA 346 (394)
T ss_dssp BEEEEECCTTT-SSCSSSSCEEEEEEECTTCBCCCEEES-SCEEEEEEECCEEEEET-----TE--EEEECTTCEEEECT
T ss_pred ceEEEEeCCCC-CCCCCCeeeEEEEEECCCCcCCCcccC-CcEEEEEEeCeEEEEEC-----CE--EEEEeCCCEEEECC
Confidence 44555555443 121233467888899999999999999 68999999999988773 33 78999999999999
Q ss_pred CCeEEEEECC-CCcEEEEEEEe
Q 042226 153 GLVHFQRNVG-HGNAFSISALS 173 (216)
Q Consensus 153 G~~H~~~N~g-~~~a~~l~~~~ 173 (216)
|..|.+.|.| +++++++++.+
T Consensus 347 g~~H~~~N~g~~e~~~ll~i~D 368 (394)
T 3bu7_A 347 WTWHEHCNTQERDDACLFSFND 368 (394)
T ss_dssp TCCEEEEECCSSCCEEEEEEES
T ss_pred CCeEEeEeCCCCCCeEEEEeeC
Confidence 9999999999 79999988753
No 94
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.04 E-value=1e-09 Score=91.43 Aligned_cols=73 Identities=11% Similarity=0.017 Sum_probs=64.6
Q ss_pred ceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEE
Q 042226 91 GVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSIS 170 (216)
Q Consensus 91 gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 170 (216)
+..+.++.++||...++|.|+ .+|++||++|++++.+.+ + +..|++||++++|+|.+|...+. ++++++.
T Consensus 36 ~~~~~~~~~~~G~~~~~h~h~-~~~~~~Vl~G~~~~~i~~-----~--~~~l~~Gd~~~~p~~~~H~~~a~--~~~~~l~ 105 (227)
T 3rns_A 36 NSYISLFSLAKDEEITAEAML-GNRYYYCFNGNGEIFIEN-----N--KKTISNGDFLEITANHNYSIEAR--DNLKLIE 105 (227)
T ss_dssp SEEEEEEEECTTCEEEECSCS-SCEEEEEEESEEEEEESS-----C--EEEEETTEEEEECSSCCEEEEES--SSEEEEE
T ss_pred CcEEEEEEECCCCccCccccC-CCEEEEEEeCEEEEEECC-----E--EEEECCCCEEEECCCCCEEEEEC--CCcEEEE
Confidence 568899999999999999999 799999999999999853 3 68999999999999999999986 4688887
Q ss_pred EEe
Q 042226 171 ALS 173 (216)
Q Consensus 171 ~~~ 173 (216)
+..
T Consensus 106 i~~ 108 (227)
T 3rns_A 106 IGE 108 (227)
T ss_dssp EEE
T ss_pred EEe
Confidence 754
No 95
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=98.97 E-value=1.6e-09 Score=85.62 Aligned_cols=73 Identities=16% Similarity=0.077 Sum_probs=59.1
Q ss_pred ceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEE
Q 042226 91 GVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSIS 170 (216)
Q Consensus 91 gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 170 (216)
.+++..+++. ++ +.|||...+|+.||++|++++.+. ++ ...+++||+++||+|..|.+.|. +++++++
T Consensus 65 ~~s~g~~~~e-~~--~~~~~~~~eE~~yVLeG~~~l~i~-----g~--~~~l~~GD~i~iP~G~~h~~~n~--~~a~~l~ 132 (151)
T 4axo_A 65 RLGCGMMEMK-ET--TFDWTLNYDEIDYVIDGTLDIIID-----GR--KVSASSGELIFIPKGSKIQFSVP--DYARFIY 132 (151)
T ss_dssp SCEEEEEEEE-EE--EEEEECSSEEEEEEEEEEEEEEET-----TE--EEEEETTCEEEECTTCEEEEEEE--EEEEEEE
T ss_pred cEEEEEEEEc-Cc--cccEeCCCcEEEEEEEeEEEEEEC-----CE--EEEEcCCCEEEECCCCEEEEEeC--CCEEEEE
Confidence 4677777776 43 356677789999999999999872 33 78999999999999999999997 6788888
Q ss_pred EEeCC
Q 042226 171 ALSSQ 175 (216)
Q Consensus 171 ~~~s~ 175 (216)
+....
T Consensus 133 V~~P~ 137 (151)
T 4axo_A 133 VTYPA 137 (151)
T ss_dssp EEECS
T ss_pred EECCC
Confidence 77543
No 96
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=98.93 E-value=1.3e-08 Score=83.33 Aligned_cols=84 Identities=19% Similarity=0.231 Sum_probs=66.7
Q ss_pred EEEEEEEcCCc----------ccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECC
Q 042226 93 SLARIDYAPWG----------VVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVG 162 (216)
Q Consensus 93 s~~~~~l~pG~----------~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g 162 (216)
+...+.+.|+. ..++|+|+ ..|++||++|++.+.+.+.+ ++.+...+++||++++|+|+.|+..+..
T Consensus 75 ~~D~v~~~p~~~p~~~~k~~~~~~~H~H~-~~Ei~yVleG~G~f~i~d~~--d~~~~i~v~~GDlIiIPaG~~H~f~~~~ 151 (191)
T 1vr3_A 75 WMDIITICKDTLPNYEEKIKMFFEEHLHL-DEEIRYILEGSGYFDVRDKE--DKWIRISMEKGDMITLPAGIYHRFTLDE 151 (191)
T ss_dssp EEEEEEESTTTSTTHHHHHHHHHSCEECS-SCEEEEEEEEEEEEEEECTT--SCEEEEEEETTEEEEECTTCCEEEEECT
T ss_pred ceeEEEECCCcCcchhhhhccCCcceECC-cceEEEEEeceEEEEECCCC--CeEEEEEECCCCEEEECcCCcCCcccCC
Confidence 45566677775 24899999 59999999999999997642 4455679999999999999999999877
Q ss_pred CCcEEEEEEEeCCCCcee
Q 042226 163 HGNAFSISALSSQNPGVI 180 (216)
Q Consensus 163 ~~~a~~l~~~~s~~pg~~ 180 (216)
+...+.+-+|..+ |+..
T Consensus 152 ~~~~~airlF~~~-~~W~ 168 (191)
T 1vr3_A 152 KNYVKAMRLFVGE-PVWT 168 (191)
T ss_dssp TCCEEEEEEESSS-CCCC
T ss_pred CCCEEEEEEECCC-CCcc
Confidence 7778888787644 4443
No 97
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.86 E-value=4.6e-09 Score=77.33 Aligned_cols=64 Identities=20% Similarity=0.182 Sum_probs=50.9
Q ss_pred EEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEE
Q 042226 96 RIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFS 168 (216)
Q Consensus 96 ~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~ 168 (216)
...+.||.. ++| |+ ..|++||++|++++.+.+ ++ ...|++||+++||+|.+|.+.|.++....+
T Consensus 35 ~~~~~pg~~-~~h-H~-~~E~~~Vl~G~~~~~i~~----g~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~~y 98 (101)
T 1o5u_A 35 IWEKEVSEF-DWY-YD-TNETCYILEGKVEVTTED----GK--KYVIEKGDLVTFPKGLRCRWKVLEPVRKHY 98 (101)
T ss_dssp EEEECSEEE-EEE-CS-SCEEEEEEEEEEEEEETT----CC--EEEEETTCEEEECTTCEEEEEEEEEEEEEE
T ss_pred EEEeCCCcc-ccc-CC-ceEEEEEEeCEEEEEECC----CC--EEEECCCCEEEECCCCcEEEEeCCCeeEEE
Confidence 556778763 456 77 799999999999998841 22 689999999999999999999987654433
No 98
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=98.83 E-value=3e-08 Score=72.03 Aligned_cols=72 Identities=17% Similarity=0.216 Sum_probs=63.1
Q ss_pred EEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEEE-eCCCCceeEee---hhhhcCCCCCCHHHHHHHcCCCHHHHHHHh
Q 042226 138 ITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISAL-SSQNPGVITIA---NAVFGSNPAIAADILAKAFQVDKSVVDQLQ 213 (216)
Q Consensus 138 ~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~-~s~~pg~~~~~---~~lf~~~p~~p~~vl~~af~~~~~~v~~l~ 213 (216)
+...|++||+++||+|.+-.+.+.+ ...+++.- +.+++....++ .++++. +|.++|+.+|+++.+++++|+
T Consensus 6 ~~~~l~~G~v~vVPq~~~v~~~A~~--~le~v~F~tna~~~~~~~LAG~~~Svl~~---l~~evla~aF~~s~ee~~~l~ 80 (93)
T 1dgw_Y 6 YAATLSEGDIIVIPSSFPVALKAAS--DLNMVGIGVNAENNERNFLAGHKENVIRQ---IPRQVSDLTFPGSGEEVEELL 80 (93)
T ss_dssp EEEEECTTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSTTBSTTT---SCHHHHHHHSSSCTHHHHHHT
T ss_pred hhceecCCcEEEECCCCceeEEecC--CeEEEEEEecCCCCeeeeccCCcccHHHh---CCHHHHHHHcCCCHHHHHHHH
Confidence 4679999999999999999998874 48888874 44588888886 589998 999999999999999999997
Q ss_pred h
Q 042226 214 T 214 (216)
Q Consensus 214 ~ 214 (216)
.
T Consensus 81 ~ 81 (93)
T 1dgw_Y 81 E 81 (93)
T ss_dssp T
T ss_pred h
Confidence 5
No 99
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=98.82 E-value=1.4e-08 Score=80.67 Aligned_cols=87 Identities=15% Similarity=0.177 Sum_probs=68.7
Q ss_pred CCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEc
Q 042226 72 LGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFP 151 (216)
Q Consensus 72 ~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P 151 (216)
.|.+++.+..+.- .+..+.+++++||+..+.|+|+ ..|.+||++|++.+. + + ..++++||.++.|
T Consensus 27 ~Gv~~~~L~~d~~-----~g~~v~lvr~~pG~~~p~H~H~-g~ee~~VL~G~~~~~---e---~---~~~~~~Gd~~~~P 91 (159)
T 3ebr_A 27 NDVMVKYFKIDPV-----RGETITLLKAPAGMEMPRHHHT-GTVIVYTVQGSWRYK---E---H---DWVAHAGSVVYET 91 (159)
T ss_dssp SSSEEEEEEEETT-----TTEEEEEEEECSSCBCCCEEES-SCEEEEEEESCEEET---T---S---SCCBCTTCEEEEC
T ss_pred CCEEEEEeeEcCC-----CCeEEEEEEECCCCCcccccCC-CCEEEEEEEeEEEEe---C---C---CeEECCCeEEEEC
Confidence 4666666642211 2457888999999999999999 688899999998862 2 1 2379999999999
Q ss_pred CCCeEEEEEC--CCCcEEEEEEEe
Q 042226 152 IGLVHFQRNV--GHGNAFSISALS 173 (216)
Q Consensus 152 ~G~~H~~~N~--g~~~a~~l~~~~ 173 (216)
+|..|...+. ++++++++.+..
T Consensus 92 ~g~~H~~~~~~~~~e~~~~~~~~~ 115 (159)
T 3ebr_A 92 ASTRHTPQSAYAEGPDIITFNIVA 115 (159)
T ss_dssp SSEEECEEESSSSSSCEEEEEEEE
T ss_pred CCCcceeEeCCCCCCCEEEEEEec
Confidence 9999999998 778998888654
No 100
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=98.81 E-value=1.2e-08 Score=83.57 Aligned_cols=70 Identities=19% Similarity=0.182 Sum_probs=61.0
Q ss_pred eEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEE
Q 042226 92 VSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISA 171 (216)
Q Consensus 92 vs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~ 171 (216)
..+..+.++||+..|.|+|+ +.|+.||++|++. ++ ..++++||++++|+|..|...+.+++.++.+++
T Consensus 125 ~~v~l~~~~pG~~~p~H~H~-g~E~~~VL~G~f~----de-------~~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~~ 192 (195)
T 2q1z_B 125 AIARLLWIPGGQAVPDHGHR-GLELTLVLQGAFR----DE-------TDRFGAGDIEIADQELEHTPVAERGLDCICLAA 192 (195)
T ss_dssp SEEEEEEECTTCBCCCCCCS-SCEEEEEEESEEE----CS-------SSEEETTCEEEECSSCCCCCEECSSSCEEEEEE
T ss_pred cEEEEEEECCCCCCCCcCCC-CeEEEEEEEEEEE----CC-------cEEECCCeEEEeCcCCccCCEeCCCCCEEEEEE
Confidence 35678899999999999998 7999999999965 32 248999999999999999999987889999887
Q ss_pred Ee
Q 042226 172 LS 173 (216)
Q Consensus 172 ~~ 173 (216)
.+
T Consensus 193 ~d 194 (195)
T 2q1z_B 193 TD 194 (195)
T ss_dssp EC
T ss_pred ec
Confidence 64
No 101
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.80 E-value=4.4e-08 Score=78.52 Aligned_cols=69 Identities=17% Similarity=0.211 Sum_probs=55.8
Q ss_pred cCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECC
Q 042226 89 TLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVG 162 (216)
Q Consensus 89 ~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g 162 (216)
+..+.+.. .-.|++...+|.|+ .+|++||++|++++.+.+. ++.....|++||++++|+|+.|.-...+
T Consensus 33 d~~~~V~~-v~Gpn~r~d~H~h~-~dE~FyvlkG~m~i~v~d~---g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 33 DSDFIVTV-VGGPNHRTDYHDDP-LEEFFYQLRGNAYLNLWVD---GRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp SCSEEEEE-ECSCBCCCCEEECS-SCEEEEEEESCEEEEEEET---TEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred CCcEEEEE-EcCCCcCccCcCCC-CceEEEEEeeEEEEEEEcC---CceeeEEECCCCEEEeCCCCCcCccccC
Confidence 33444443 34677889999887 8999999999999999874 4455789999999999999999987654
No 102
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.80 E-value=1.4e-08 Score=85.61 Aligned_cols=72 Identities=15% Similarity=0.110 Sum_probs=61.7
Q ss_pred CceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEE
Q 042226 90 LGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSI 169 (216)
Q Consensus 90 ~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 169 (216)
..+.+.+++++||+....|+ .+|++||++|++++.+.+ + .+.|++||.++||++..|.+.|. ++++++
T Consensus 48 ~~~~~~~~~l~Pg~~~~~~~---~ee~~~Vl~G~~~~~~~~-----~--~~~l~~Gd~~~~p~~~~H~~~n~--~~~~~l 115 (246)
T 1sfn_A 48 ARFVQFTAEMPAGAQATESV---YQRFAFVLSGEVDVAVGG-----E--TRTLREYDYVYLPAGEKHMLTAK--TDARVS 115 (246)
T ss_dssp CSSEEEEEEECTTCEEECCS---SEEEEEEEEEEEEEECSS-----C--EEEECTTEEEEECTTCCCEEEEE--EEEEEE
T ss_pred CcEEEEEEEECCCCcCCCCc---eeEEEEEEECEEEEEECC-----E--EEEECCCCEEEECCCCCEEEEeC--CCEEEE
Confidence 35678899999998877774 789999999999998743 3 68999999999999999999998 778888
Q ss_pred EEEe
Q 042226 170 SALS 173 (216)
Q Consensus 170 ~~~~ 173 (216)
.+..
T Consensus 116 ~v~~ 119 (246)
T 1sfn_A 116 VFEK 119 (246)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7763
No 103
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.76 E-value=1.2e-08 Score=77.76 Aligned_cols=73 Identities=15% Similarity=0.093 Sum_probs=56.8
Q ss_pred ceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEE
Q 042226 91 GVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSIS 170 (216)
Q Consensus 91 gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 170 (216)
.++....+..||... .|+|. ..|++||++|++++.+.+ ++ ...|++||+++||+|..|.+.|.+... ++++
T Consensus 48 ~~~~g~w~~~pG~~~-~~~~~-~~E~~~Vl~G~~~l~~~~----g~--~~~l~~GD~~~ip~g~~h~~~~~~~~r-K~yv 118 (123)
T 3bcw_A 48 KVESGVWESTSGSFQ-SNTTG-YIEYCHIIEGEARLVDPD----GT--VHAVKAGDAFIMPEGYTGRWEVDRHVK-KIYF 118 (123)
T ss_dssp TEEEEEEEEEEEEEE-CCCTT-EEEEEEEEEEEEEEECTT----CC--EEEEETTCEEEECTTCCCEEEEEEEEE-EEEE
T ss_pred CEEEEEEEECCCcee-eEcCC-CcEEEEEEEEEEEEEECC----Ce--EEEECCCCEEEECCCCeEEEEECCcee-EEEE
Confidence 467888888998654 57665 489999999999998622 33 679999999999999999999986544 3343
Q ss_pred EE
Q 042226 171 AL 172 (216)
Q Consensus 171 ~~ 172 (216)
++
T Consensus 119 ~~ 120 (123)
T 3bcw_A 119 VT 120 (123)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 104
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=98.72 E-value=8.6e-09 Score=80.45 Aligned_cols=91 Identities=13% Similarity=-0.031 Sum_probs=64.8
Q ss_pred CCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEc
Q 042226 72 LGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFP 151 (216)
Q Consensus 72 ~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P 151 (216)
.|...+.+.... ..|-.+.+++++||+..+.|+|+ ..|.+||++|++..... .......+++||.+++|
T Consensus 29 ~Gv~~~~L~~~~-----~~g~~~~~~~~~pG~~~p~H~H~-~~ee~~VL~G~~~~~~g-----~~~~~~~~~~Gd~~~~p 97 (145)
T 2o1q_A 29 GGIRWKLLHVSP-----EMGSWTAIFDCPAGSSFAAHVHV-GPGEYFLTKGKMDVRGG-----KAAGGDTAIAPGYGYES 97 (145)
T ss_dssp SCCEEEEEEEET-----TTTEEEEEEEECTTEEECCEEES-SCEEEEEEEEEEEETTC-----GGGTSEEEESSEEEEEC
T ss_pred CCcEEEEeeECC-----CcccEEEEEEECCCCCCCccCCC-CCEEEEEEEeEEEEcCC-----CEecceEeCCCEEEEEC
Confidence 455555553322 12335788999999999999999 46669999999996421 11012789999999999
Q ss_pred CCCeEE-EEECCCCcEEEEEEEeCC
Q 042226 152 IGLVHF-QRNVGHGNAFSISALSSQ 175 (216)
Q Consensus 152 ~G~~H~-~~N~g~~~a~~l~~~~s~ 175 (216)
+|..|. ..+ .+.++++.+++..
T Consensus 98 ~g~~H~p~~~--~e~~~~l~~~~gp 120 (145)
T 2o1q_A 98 ANARHDKTEF--PVASEFYMSFLGP 120 (145)
T ss_dssp TTCEESCCEE--EEEEEEEEEEESC
T ss_pred cCCccCCeEC--CCCeEEEEEECCc
Confidence 999999 433 3557777777644
No 105
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.69 E-value=9.7e-09 Score=83.23 Aligned_cols=70 Identities=17% Similarity=0.226 Sum_probs=56.1
Q ss_pred cCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEEEeCCCCce
Q 042226 105 VPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISALSSQNPGV 179 (216)
Q Consensus 105 ~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg~ 179 (216)
.++|+|+ ..|+.||++|++.+.+.. + ++.+...+++||++++|+|+.|++.+..+...+.+-+|..+ |+.
T Consensus 93 ~~~H~H~-~~Ei~~Vl~G~g~~~i~~-~--d~~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~~-~~w 162 (179)
T 1zrr_A 93 LNEHTHG-EDEVRFFVEGAGLFCLHI-G--DEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDNP-EGW 162 (179)
T ss_dssp HSCBEES-SCEEEEEEESCCCCCEEC-S--SCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECCG-GGE
T ss_pred ccceECC-hheEEEEEcceEEEEEEe-C--CEEEEEEECCCCEEEECCCCeEeeecCCCceEEEEEeccCC-CCc
Confidence 5899999 599999999999998752 2 45556779999999999999999987666667777777544 443
No 106
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=98.66 E-value=5.6e-08 Score=77.70 Aligned_cols=74 Identities=24% Similarity=0.259 Sum_probs=59.9
Q ss_pred ceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECC--CCcEEE
Q 042226 91 GVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVG--HGNAFS 168 (216)
Q Consensus 91 gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g--~~~a~~ 168 (216)
|..+.++.++||+..++|+|+ ..|.+||++|++... . .. ...+++||.++.|+|..|...+.. +++++.
T Consensus 42 g~~v~lvr~~pG~~~p~H~H~-g~ee~~VL~G~f~~~---~---~~--~~~~~aGd~~~~P~g~~H~~~a~~~~~~gci~ 112 (165)
T 3cjx_A 42 GLMVMRASFAPGLTLPLHFHT-GTVHMYTISGCWYYT---E---YP--GQKQTAGCYLYEPGGSIHQFNTPRDNEGQTEV 112 (165)
T ss_dssp TEEEEEEEECTTCBCCEEEES-SCEEEEEEESEEEET---T---CT--TSCEETTEEEEECTTCEECEECCTTCSSCEEE
T ss_pred CcEEEEEEECCCCcCCcccCC-CCEEEEEEEEEEEEC---C---Cc--eEEECCCeEEEeCCCCceeeEeCCCCCCCcEE
Confidence 456889999999999999999 689999999999862 1 11 247899999999999999998865 347766
Q ss_pred EEEEe
Q 042226 169 ISALS 173 (216)
Q Consensus 169 l~~~~ 173 (216)
+.+..
T Consensus 113 l~v~~ 117 (165)
T 3cjx_A 113 IFMLS 117 (165)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 66554
No 107
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.65 E-value=1.4e-07 Score=83.63 Aligned_cols=79 Identities=20% Similarity=0.149 Sum_probs=63.8
Q ss_pred CccCceEEEEEEEcCC---cccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCC
Q 042226 87 LNTLGVSLARIDYAPW---GVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGH 163 (216)
Q Consensus 87 l~~~gvs~~~~~l~pG---~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~ 163 (216)
.+...+++.++++.++ +..+.|.|+ ..|++||++|++++.+.+. + ...|++||++++|+|.+|.+.|.++
T Consensus 244 ~~~~~f~~~~i~~~~~~~g~~~~~h~~~-~~~~~~vleG~~~i~i~g~----~--~~~l~~Gd~~~iPag~~h~~~~~~~ 316 (350)
T 1juh_A 244 AQDTNYTLSTISMSTTPSTVTVPTWSFP-GACAFQVQEGRVVVQIGDY----A--ATELGSGDVAFIPGGVEFKYYSEAY 316 (350)
T ss_dssp HGGGCEEEEEEEECCCCTTSCCCCBCCS-SCEEEEEEESCEEEEETTS----C--CEEECTTCEEEECTTCCEEEEESSS
T ss_pred CceeEEEEEEEeeccccCCCCCCcccCC-CcEEEEEEeeEEEEEECCe----E--EEEeCCCCEEEECCCCCEEEEecCC
Confidence 3444568888888884 478889898 7999999999999998531 3 6799999999999999999999865
Q ss_pred CcEEEEEEEe
Q 042226 164 GNAFSISALS 173 (216)
Q Consensus 164 ~~a~~l~~~~ 173 (216)
. +.++.+.+
T Consensus 317 ~-~~~l~~~~ 325 (350)
T 1juh_A 317 F-SKVLFVSS 325 (350)
T ss_dssp S-EEEEEEEE
T ss_pred e-EEEEEEec
Confidence 4 66666654
No 108
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=98.64 E-value=6.6e-07 Score=71.89 Aligned_cols=87 Identities=18% Similarity=0.225 Sum_probs=72.7
Q ss_pred ceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCc---eEEEEecCCcEEEEcCCCeEEEEECCCCcEE
Q 042226 91 GVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENR---LITKVLQKGDVFVFPIGLVHFQRNVGHGNAF 167 (216)
Q Consensus 91 gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~---~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~ 167 (216)
++++..+...||...++|-|..+..+++|++|+++..+.... +++ ..+..+++||++++|++.+|.+.|.++++++
T Consensus 68 ~~~v~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~-~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~~~aV 146 (171)
T 3eqe_A 68 ELEIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRST-GEHAELSNSYFVHEGECLISTKGLIHKMSNPTSERMV 146 (171)
T ss_dssp SCEEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEEC-SSSEEEEEEEEEETTCEEEECTTCEEEEECCSSSCEE
T ss_pred CeEEEEEEECCCCCcccccCCCceEEEEEEeeeEEEEEeecC-CCceeecceEEeCCCcEEEeCCCCEEEEECCCCCCEE
Confidence 467889999999999999999778899999999998754322 121 1367899999999999999999999999999
Q ss_pred EEEEEeCCCCc
Q 042226 168 SISALSSQNPG 178 (216)
Q Consensus 168 ~l~~~~s~~pg 178 (216)
-+-++..+..+
T Consensus 147 SlHvY~pp~~~ 157 (171)
T 3eqe_A 147 SLHVYSPPLED 157 (171)
T ss_dssp EEEEEESCCCC
T ss_pred EEEEeCCCccc
Confidence 99999866543
No 109
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=98.64 E-value=1.1e-07 Score=76.72 Aligned_cols=82 Identities=17% Similarity=0.234 Sum_probs=61.7
Q ss_pred eEEEEEEEcCCcccCCccCCC------ccEEEEEEeCeEEEEEEecCCC--------Cc------eEEEEecCCcEEEEc
Q 042226 92 VSLARIDYAPWGVVPPHVHPR------ATEILTVIEGSLEVGFVTSNPE--------NR------LITKVLQKGDVFVFP 151 (216)
Q Consensus 92 vs~~~~~l~pG~~~ppH~Hp~------a~Ei~yVl~G~~~~~~~~~~~~--------~~------~~~~~L~~GDv~~~P 151 (216)
...-++.+.||...|.|.|+. -.|-++|++|++++.+.+..-+ ++ .....|++||++.+|
T Consensus 53 Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvtIp 132 (175)
T 2y0o_A 53 YCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTIP 132 (175)
T ss_dssp EEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEESSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEEEC
T ss_pred ceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEECCccccCcceeccCCceeeecCCcEEEECCCCEEEEC
Confidence 567888899999999999998 8899999999999877332100 00 024699999999999
Q ss_pred CCCeEEEEECCCCcEEEEEEEeCC
Q 042226 152 IGLVHFQRNVGHGNAFSISALSSQ 175 (216)
Q Consensus 152 ~G~~H~~~N~g~~~a~~l~~~~s~ 175 (216)
+|+.|+++| +.+. +++.-+++.
T Consensus 133 pg~~H~f~a-geeg-vli~EvSt~ 154 (175)
T 2y0o_A 133 PNTKHWFQA-GEEG-AVVTEMSST 154 (175)
T ss_dssp TTCCEEEEE-EEEE-EEEEEEEEC
T ss_pred CCCcEEEEe-CCCC-EEEEEEeCC
Confidence 999999999 3344 444445443
No 110
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.54 E-value=6.5e-07 Score=79.92 Aligned_cols=88 Identities=18% Similarity=0.096 Sum_probs=69.0
Q ss_pred Cce-EEEeecc-CCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEE
Q 042226 73 GSR-VTPVTVA-QIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVF 150 (216)
Q Consensus 73 g~~-~~~~~~~-~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~ 150 (216)
|.. +..+|.. .-+.+.++ .+....++||...++|.|. .+++++|++|++++.+. ++ +...++||+|++
T Consensus 260 g~~~~~y~NP~tg~~~~pti--~~~~~~L~pG~~t~~hRht-~s~Vy~V~eG~G~~~I~-----~~--~~~w~~gD~fvv 329 (368)
T 3nw4_A 260 GHAAIRYVNPTTGGDVMPTL--RCEFHRLRAGTETATRNEV-GSTVFQVFEGAGAVVMN-----GE--TTKLEKGDMFVV 329 (368)
T ss_dssp TEEEEECBCTTTSSBSSSSC--EEEEEEECTTCBCCCEEES-SCEEEEEEESCEEEEET-----TE--EEEECTTCEEEE
T ss_pred ceEEEEEeCCCCCCCcchhH--HhheEEECCCCccCCeecc-ccEEEEEEeCcEEEEEC-----CE--EEEecCCCEEEE
Confidence 444 5666643 23345555 4555668999999999999 68999999999999884 33 789999999999
Q ss_pred cCCCeEEEEECCCCcEEEEEEE
Q 042226 151 PIGLVHFQRNVGHGNAFSISAL 172 (216)
Q Consensus 151 P~G~~H~~~N~g~~~a~~l~~~ 172 (216)
|++..|...|. +++.++++-
T Consensus 330 P~w~~h~~~n~--~~a~Lf~~~ 349 (368)
T 3nw4_A 330 PSWVPWSLQAE--TQFDLFRFS 349 (368)
T ss_dssp CTTCCEEEEES--SSEEEEEEE
T ss_pred CCCCcEEEEeC--CCEEEEEEe
Confidence 99999999996 577777653
No 111
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.52 E-value=4.2e-07 Score=72.84 Aligned_cols=62 Identities=21% Similarity=0.363 Sum_probs=50.5
Q ss_pred EcCCcccCCccCCCccEEEEEEeCeEEEEEEecC-CCCceEEEEecCCcEEEEcCCCeEEEEEC
Q 042226 99 YAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSN-PENRLITKVLQKGDVFVFPIGLVHFQRNV 161 (216)
Q Consensus 99 l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~-~~~~~~~~~L~~GDv~~~P~G~~H~~~N~ 161 (216)
=.|+....+|.|+ .+|++|+++|++.+.+.+.+ .+.+.....|++||++++|+|++|+-...
T Consensus 41 gGPn~r~D~H~~~-~eE~Fy~lkG~m~l~v~d~g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~ 103 (176)
T 1zvf_A 41 GGPNERTDYHINP-TPEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYLLPGNVPHSPVRF 103 (176)
T ss_dssp CSSBCCSCEEECS-SCEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEEECTTCCEEEEEC
T ss_pred cCCCcCCcCcCCC-CceEEEEEeCEEEEEEEcCCCcccceeeEEECCCCEEEcCCCCCcCCccc
Confidence 3566778999666 89999999999999998731 00145678999999999999999998664
No 112
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=98.51 E-value=1.7e-06 Score=71.47 Aligned_cols=83 Identities=18% Similarity=0.187 Sum_probs=68.3
Q ss_pred ceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCce----EEEEecCCcEEEEcC--CCeEEEEEC-CC
Q 042226 91 GVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRL----ITKVLQKGDVFVFPI--GLVHFQRNV-GH 163 (216)
Q Consensus 91 gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~----~~~~L~~GDv~~~P~--G~~H~~~N~-g~ 163 (216)
.+.+..+...||...++|-|.. ..+++|++|+++..+..-..+++. .+.++++||+.++++ |.+|.+.|. ++
T Consensus 78 ~~~v~~l~w~PGq~spiHdH~~-~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~ 156 (208)
T 2gm6_A 78 RFSIVSFVWGPGQRTPIHDHTV-WGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDD 156 (208)
T ss_dssp SCEEEEEEECTTCBCCSBCCSS-CEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEeCCCcccCcccCCc-ceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCC
Confidence 4578889999999999999994 999999999998876542111211 257999999999999 999999999 68
Q ss_pred CcEEEEEEEeC
Q 042226 164 GNAFSISALSS 174 (216)
Q Consensus 164 ~~a~~l~~~~s 174 (216)
++++.+-++..
T Consensus 157 ~~avsLHvY~~ 167 (208)
T 2gm6_A 157 RVSISIHVYGA 167 (208)
T ss_dssp SCEEEEEEESS
T ss_pred CcEEEEEEEcC
Confidence 89999988854
No 113
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=98.50 E-value=5.1e-07 Score=79.00 Aligned_cols=78 Identities=21% Similarity=0.247 Sum_probs=64.1
Q ss_pred EEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecC-C---cEEEEcCCCeEEEEECCCCcEEE
Q 042226 93 SLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQK-G---DVFVFPIGLVHFQRNVGHGNAFS 168 (216)
Q Consensus 93 s~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~-G---Dv~~~P~G~~H~~~N~g~~~a~~ 168 (216)
.....+..||....+|||....|.++|++|++.+.+.+.. .++ ...+.. | +.+++|+|..|.+.|.|++++++
T Consensus 273 q~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~ 349 (369)
T 3st7_A 273 QVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVN-DDE--IIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVT 349 (369)
T ss_dssp EEEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETT-CCC--CEEEEEETTBCCEEEECTTEEEEEEECSSSCEEE
T ss_pred eEEEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCC-CCc--EEEEEecCCcceEEEeCCCceEEeEEcCCCcEEE
Confidence 3455678999999999999999999999999999776543 244 445555 7 99999999999999999999988
Q ss_pred EEEEe
Q 042226 169 ISALS 173 (216)
Q Consensus 169 l~~~~ 173 (216)
+..-+
T Consensus 350 ~~~~~ 354 (369)
T 3st7_A 350 IMWVN 354 (369)
T ss_dssp EEEES
T ss_pred EEecC
Confidence 87654
No 114
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.49 E-value=3.7e-07 Score=70.69 Aligned_cols=80 Identities=11% Similarity=0.162 Sum_probs=58.7
Q ss_pred eEEEEEEEcCC----cccCCccCCCccEEEEEEeCeEEEEEEecC-CCCceEEEEecCCcEEEEcCCCeEEEEECCCCcE
Q 042226 92 VSLARIDYAPW----GVVPPHVHPRATEILTVIEGSLEVGFVTSN-PENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNA 166 (216)
Q Consensus 92 vs~~~~~l~pG----~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~-~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a 166 (216)
-.++...+.|. ++..+|.|+...|+++|++|++++.+.+.. +..+.....+++|++++||+|+.|..... +.+
T Consensus 25 W~Va~~n~~~~~~~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~--~e~ 102 (140)
T 3d0j_A 25 WLVCIKNWKPDNDIEGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQ--KDT 102 (140)
T ss_dssp EEEEEEECCGGGBTTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEEC--TTC
T ss_pred EEEEEEeccCcCCcccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCC--Cce
Confidence 34555555554 577899999999999999999999987421 00112368999999999999999998774 445
Q ss_pred EEEEEEe
Q 042226 167 FSISALS 173 (216)
Q Consensus 167 ~~l~~~~ 173 (216)
+++.+=.
T Consensus 103 ~vLLiEp 109 (140)
T 3d0j_A 103 KMMYVQD 109 (140)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 5555443
No 115
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.40 E-value=2.3e-06 Score=65.88 Aligned_cols=59 Identities=20% Similarity=0.197 Sum_probs=49.0
Q ss_pred CCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCC-CcEEEEEEE
Q 042226 106 PPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGH-GNAFSISAL 172 (216)
Q Consensus 106 ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~-~~a~~l~~~ 172 (216)
.||.|+ .-|++||++|++++.+. ++ .+.+++||++++|+|.+|...+.++ ++...+.+.
T Consensus 32 ~p~~h~-~~~i~~v~~G~~~~~i~-----~~--~~~l~~Gd~~~i~p~~~H~~~~~~~~~~~~~~~i~ 91 (164)
T 2arc_A 32 RPLGMK-GYILNLTIRGQGVVKNQ-----GR--EFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVY 91 (164)
T ss_dssp ETTCCS-SEEEEEEEEECEEEEET-----TE--EEEECTTCEEEECTTCCEEEEECTTSSEEEEEEEE
T ss_pred cccCCC-ceEEEEEEEeEEEEEEC-----CE--EEEecCCeEEEEcCCCCEEEEeCCCCCcEEEEEEE
Confidence 489998 69999999999999883 33 7899999999999999999988763 656655544
No 116
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=98.39 E-value=1.4e-06 Score=72.78 Aligned_cols=85 Identities=16% Similarity=0.192 Sum_probs=65.4
Q ss_pred CCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEc
Q 042226 72 LGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFP 151 (216)
Q Consensus 72 ~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P 151 (216)
.|...+.+.... . ..+....++.++||...|.|+|+ ..|.+||++|++. ++ ...+.+||.++.|
T Consensus 27 ~Gv~~~~L~~~~--~--e~g~~~~lvr~~pG~~~p~H~H~-g~Ee~~VL~G~f~----d~-------~~~~~~Gd~~~~P 90 (223)
T 3o14_A 27 KGVERRMLDRIG--G--EVARATSIVRYAPGSRFSAHTHD-GGEEFIVLDGVFQ----DE-------HGDYPAGTYVRNP 90 (223)
T ss_dssp TTEEEEEEEEES--S--SSCEEEEEEEECTTEECCCEECT-TCEEEEEEEEEEE----ET-------TEEEETTEEEEEC
T ss_pred CCEEEEEeecCC--C--ccccEEEEEEECCCCCcccccCC-CCEEEEEEEeEEE----EC-------CeEECCCeEEEeC
Confidence 455566554322 1 22446778899999999999999 6899999999976 22 3489999999999
Q ss_pred CCCeEEEEECCCCcEEEEEEEeC
Q 042226 152 IGLVHFQRNVGHGNAFSISALSS 174 (216)
Q Consensus 152 ~G~~H~~~N~g~~~a~~l~~~~s 174 (216)
+|..|.... ++.|.+++.+..
T Consensus 91 ~g~~H~p~a--~~gc~~~vk~~~ 111 (223)
T 3o14_A 91 PTTSHVPGS--AEGCTIFVKLWQ 111 (223)
T ss_dssp TTCEECCEE--SSCEEEEEEESC
T ss_pred CCCccccEe--CCCCEEEEEecC
Confidence 999998876 577888887753
No 117
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.37 E-value=2e-06 Score=73.66 Aligned_cols=72 Identities=15% Similarity=0.302 Sum_probs=57.3
Q ss_pred cCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEEEeCCCC
Q 042226 100 APWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISALSSQNP 177 (216)
Q Consensus 100 ~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~p 177 (216)
.|+....+| |...+|++|+++|.+.+.+.+. ++.....|++||++++|+|+.|.-.... .++.+.+=....+
T Consensus 39 GpN~R~d~H-~~~~dE~FyqlkG~m~l~~~d~---g~~~~V~i~eGemfllP~gv~HsP~r~~--et~gLviE~~R~~ 110 (286)
T 2qnk_A 39 GPNTRKDYH-IEEGEEVFYQLEGDMVLRVLEQ---GKHRDVVIRQGEIFLLPARVPHSPQRFA--NTVGLVVERRRLE 110 (286)
T ss_dssp SCBCCCCEE-ECSSCEEEEEEESCEEEEEEET---TEEEEEEECTTEEEEECTTCCEEEEECT--TCEEEEEEECCCT
T ss_pred CCCcCccCc-CCCCCeEEEEEeCeEEEEEEeC---CceeeEEECCCeEEEeCCCCCcCCcccC--CeEEEEEeecCCC
Confidence 455568999 8889999999999999999874 5566889999999999999999987743 4555555443333
No 118
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=98.37 E-value=5e-07 Score=71.30 Aligned_cols=90 Identities=11% Similarity=-0.035 Sum_probs=65.3
Q ss_pred CCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEc
Q 042226 72 LGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFP 151 (216)
Q Consensus 72 ~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P 151 (216)
.|..++.+..+ | ..|-...+++++||+..++|+|+ ..|.+||++|++..+..+. .....+++|+.++-|
T Consensus 31 ~Gv~~k~L~~~--~---e~g~~t~lvr~~pG~~~p~H~H~-g~ee~~VL~G~~~~~~Gd~-----~~~~~~~aGsYv~eP 99 (153)
T 3bal_A 31 GGITWQLLHSS--P---ETSSWTAIFNCPAGSSFASHIHA-GPGEYFLTKGKMEVRGGEQ-----EGGSTAYAPSYGFES 99 (153)
T ss_dssp SCCEEEEEEEE--T---TTTEEEEEEEECTTEEECCEEES-SCEEEEEEESEEEETTCGG-----GTSEEEESSEEEEEC
T ss_pred CCeEEEEEEEC--C---ccceEEEEEEeCCCCCccCccCC-CCEEEEEEEEEEEecCccc-----cCccccCCCeEEEcC
Confidence 46667766333 2 24678899999999999999999 6888999999998753221 114688999999999
Q ss_pred CCCeEEEEECCCCcEEEEEEEe
Q 042226 152 IGLVHFQRNVGHGNAFSISALS 173 (216)
Q Consensus 152 ~G~~H~~~N~g~~~a~~l~~~~ 173 (216)
+|..|...-. +++.+++.+..
T Consensus 100 pGs~H~p~~~-~~~~~~~~~~~ 120 (153)
T 3bal_A 100 SGALHGKTFF-PVESQFYMTFL 120 (153)
T ss_dssp TTCEESCCEE-SSCEEEEEEEE
T ss_pred CCCcccceeC-CCCeEEEEEEE
Confidence 9999985332 23344444443
No 119
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=98.32 E-value=1.4e-05 Score=65.59 Aligned_cols=87 Identities=15% Similarity=0.113 Sum_probs=71.0
Q ss_pred eEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCC-----ceEEEEecCCcEEEE-cCCCeEEEEECC-CC
Q 042226 92 VSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPEN-----RLITKVLQKGDVFVF-PIGLVHFQRNVG-HG 164 (216)
Q Consensus 92 vs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~-----~~~~~~L~~GDv~~~-P~G~~H~~~N~g-~~ 164 (216)
+++..+...||...++|-|..+..+++|++|+++....+-.+++ .....++++||+.++ |++.+|.+.|.+ ++
T Consensus 70 ~~l~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~~ 149 (200)
T 3eln_A 70 FNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHTE 149 (200)
T ss_dssp CEEEEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSSC
T ss_pred eEEEEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCCC
Confidence 57888899999999999999888999999999998764421001 123689999999999 888899999999 78
Q ss_pred cEEEEEEEeCCCCc
Q 042226 165 NAFSISALSSQNPG 178 (216)
Q Consensus 165 ~a~~l~~~~s~~pg 178 (216)
+++-+=++.....+
T Consensus 150 ~avSlHvY~pp~~~ 163 (200)
T 3eln_A 150 PAVSLHLYSPPFDT 163 (200)
T ss_dssp CEEEEEEEESCCSE
T ss_pred CEEEEEeCCCCccc
Confidence 99998888766554
No 120
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=98.03 E-value=7.9e-05 Score=57.88 Aligned_cols=94 Identities=13% Similarity=0.071 Sum_probs=64.9
Q ss_pred CceEEEeec-cCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCC-cEEEE
Q 042226 73 GSRVTPVTV-AQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKG-DVFVF 150 (216)
Q Consensus 73 g~~~~~~~~-~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~G-Dv~~~ 150 (216)
.+.++.+.. ...|- . ..-.....+.+||....+|.|.+..|++++++|++.+.+.+. ....+..|... ..+.|
T Consensus 17 RG~L~~~e~~~~ipf-~-ikRvy~~~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg---~~~~~~~L~~~~~gL~I 91 (141)
T 2pa7_A 17 RGSLVAIEENKNIPF-S-IKRVYYIFDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDDG---NIIQEITLDSPAVGLYV 91 (141)
T ss_dssp TEEEEEEETTTTSSS-C-CCEEEEEESCCSSCCEEEEEESSCCEEEEEEESCEEEEEECS---SCEEEEEECCTTEEEEE
T ss_pred CCcEEEEeccCCCCC-C-ccEEEEEEecCCCCEECcCcCCCceEEEEEEccEEEEEEECC---cEEEEEEECCCCcEEEe
Confidence 344565554 34443 1 111223334568889999999999999999999999988543 23345666544 45899
Q ss_pred cCCCeEEEEECCCCcEEEEEEE
Q 042226 151 PIGLVHFQRNVGHGNAFSISAL 172 (216)
Q Consensus 151 P~G~~H~~~N~g~~~a~~l~~~ 172 (216)
|+|++|.+.+.+.+ ++++.+-
T Consensus 92 ppgvWh~~~~~s~~-avllvla 112 (141)
T 2pa7_A 92 GPAVWHEMHDFSSD-CVMMVLA 112 (141)
T ss_dssp CTTCEEEEECCCTT-CEEEEEE
T ss_pred CCCEEEEEEEcCCC-eEEEEEC
Confidence 99999999999876 6666543
No 121
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=97.99 E-value=0.00016 Score=59.80 Aligned_cols=85 Identities=18% Similarity=0.190 Sum_probs=67.8
Q ss_pred ceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCce----EEEEecCCcEEEEcCC--CeEEEEECC-C
Q 042226 91 GVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRL----ITKVLQKGDVFVFPIG--LVHFQRNVG-H 163 (216)
Q Consensus 91 gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~----~~~~L~~GDv~~~P~G--~~H~~~N~g-~ 163 (216)
.+++..+...||...++|=|. +.-++.|++|+++..+..-.++++. ...++++||+.++.++ .+|.+.|.+ +
T Consensus 72 ~f~v~~l~W~PGq~spiHDH~-swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d 150 (211)
T 3uss_A 72 RFSVVSFVWGPGQITPVHDHR-VWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSD 150 (211)
T ss_dssp SCEEEEEEECTTCBCCSBCCS-SCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEECCCCcCCCCCCC-eeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccCCCC
Confidence 357888899999999999999 8999999999998766432111221 1378999999999987 899999985 7
Q ss_pred CcEEEEEEEeCCC
Q 042226 164 GNAFSISALSSQN 176 (216)
Q Consensus 164 ~~a~~l~~~~s~~ 176 (216)
++++-+=++....
T Consensus 151 ~~avSLHvYg~pl 163 (211)
T 3uss_A 151 RTSISIHVYGANI 163 (211)
T ss_dssp SCEEEEEEESSCG
T ss_pred CCEEEEEEcCCCC
Confidence 8888888886443
No 122
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.91 E-value=6.8e-05 Score=63.10 Aligned_cols=81 Identities=16% Similarity=0.256 Sum_probs=58.8
Q ss_pred ceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEE
Q 042226 91 GVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSIS 170 (216)
Q Consensus 91 gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 170 (216)
++++..+.+ .|.... -.+| .+|++||++|++++.. + ++ ..++++||+++||+|..|.+...+.. -.+++
T Consensus 46 ~~~~G~~~~-~g~~~v-~~~p-~dE~~~VleG~~~lt~-~----g~--~~~~~~Gd~~~ip~G~~~~w~~~~~~-~~~y~ 114 (238)
T 3myx_A 46 GIAAGIVEF-GTALSV-EAYP-YTEMLVMHRGSVTLTS-G----TD--SVTLSTGESAVIGRGTQVRIDAQPES-LWAFC 114 (238)
T ss_dssp SEEEEEEEE-CSEEEE-SSCS-SEEEEEEEESEEEEEE-T----TE--EEEEETTCEEEECTTCCEEEEECTTE-EEEEE
T ss_pred CeEEEEEEe-cccccc-ccCC-CcEEEEEEEeEEEEEC-C----Ce--EEEEcCCCEEEECCCCEEEEEecCCe-EEEEE
Confidence 578888888 554332 2244 4899999999999986 2 33 78999999999999999999887654 44556
Q ss_pred EEe-CCC---CceeEe
Q 042226 171 ALS-SQN---PGVITI 182 (216)
Q Consensus 171 ~~~-s~~---pg~~~~ 182 (216)
.+. ... +|...+
T Consensus 115 ~~~~~~~p~~~~~~~i 130 (238)
T 3myx_A 115 ASTQASGPDKSGITAL 130 (238)
T ss_dssp EECSCCSCCCCSEEEE
T ss_pred eccCCCCCCCCccEEe
Confidence 666 233 454444
No 123
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=97.86 E-value=0.00017 Score=57.94 Aligned_cols=75 Identities=17% Similarity=0.144 Sum_probs=61.1
Q ss_pred EcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCC----CceEEEEec---CCcEEEEcCCCeEEEEECCCCcEEEEEE
Q 042226 99 YAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPE----NRLITKVLQ---KGDVFVFPIGLVHFQRNVGHGNAFSISA 171 (216)
Q Consensus 99 l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~----~~~~~~~L~---~GDv~~~P~G~~H~~~N~g~~~a~~l~~ 171 (216)
-.+|....+|+|....++++|++|++...+++-..+ ++.....|. ....++||+|..|.+.+.++++++++..
T Consensus 60 s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~~av~ly~ 139 (174)
T 3ejk_A 60 VLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALVANC 139 (174)
T ss_dssp ECBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTSCEEEEEE
T ss_pred CCCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccCCCEEEEEE
Confidence 478889999999888999999999999988774311 234677887 5689999999999999999877777665
Q ss_pred Ee
Q 042226 172 LS 173 (216)
Q Consensus 172 ~~ 173 (216)
.+
T Consensus 140 ~s 141 (174)
T 3ejk_A 140 TD 141 (174)
T ss_dssp ES
T ss_pred CC
Confidence 54
No 124
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.81 E-value=0.00012 Score=54.99 Aligned_cols=64 Identities=13% Similarity=0.014 Sum_probs=47.6
Q ss_pred eEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCC
Q 042226 92 VSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGH 163 (216)
Q Consensus 92 vs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~ 163 (216)
.....-+..||... .+++. ..|++||++|++++...+ ++ ..++++||+++||+|....+.-...
T Consensus 42 ~~~GvWe~tPG~~~-~~~~~-~~E~~~iLeG~~~lt~dd----G~--~~~l~aGD~~~~P~G~~gtWev~e~ 105 (116)
T 3es4_A 42 TIVAVWMAEPGIYN-YAGRD-LEETFVVVEGEALYSQAD----AD--PVKIGPGSIVSIAKGVPSRLEILSS 105 (116)
T ss_dssp CEEEEEEECSEEEE-ECCCS-EEEEEEEEECCEEEEETT----CC--CEEECTTEEEEECTTCCEEEEECSC
T ss_pred EEEEEEecCCceeE-CeeCC-CcEEEEEEEeEEEEEeCC----Ce--EEEECCCCEEEECCCCeEEEEEeEE
Confidence 34556688998643 33343 359999999999997632 33 6799999999999999988866543
No 125
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.56 E-value=0.00041 Score=58.34 Aligned_cols=64 Identities=17% Similarity=0.300 Sum_probs=49.7
Q ss_pred ceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECC
Q 042226 91 GVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVG 162 (216)
Q Consensus 91 gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g 162 (216)
.++....+..||...+.++ . ..|++||++|++++... + ++ ..++++||+++||+|..-.+.-..
T Consensus 166 ~~~~GiW~~tpG~~~~~~~-~-~~E~~~ILeG~v~lt~~--~--G~--~~~~~aGD~~~~P~G~~~tWev~e 229 (238)
T 3myx_A 166 TLRIGVWDSTPYERISRPH-K-IHELMNLIEGRVVLSLE--N--GS--SLTVNTGDTVFVAQGAPCKWTSTG 229 (238)
T ss_dssp SCEEEEEEECCEEBCCEEC-S-SCEEEEEEECCEEEEET--T--SC--EEEECTTCEEEECTTCEEEEEESS
T ss_pred CEEEeEEEeCCCEEECCcC-C-CCEEEEEEEeEEEEEeC--C--CC--EEEECCCCEEEECCCCEEEEEECc
Confidence 4678888889987554432 3 57999999999999753 2 33 689999999999999988776653
No 126
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=97.49 E-value=0.0027 Score=50.63 Aligned_cols=132 Identities=18% Similarity=0.169 Sum_probs=87.6
Q ss_pred CCCCceEEEeeccCCC-CCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCe-EEEEEEecCCCCceEEEE----ec
Q 042226 70 NPLGSRVTPVTVAQIP-GLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGS-LEVGFVTSNPENRLITKV----LQ 143 (216)
Q Consensus 70 ~~~g~~~~~~~~~~~P-~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~-~~~~~~~~~~~~~~~~~~----L~ 143 (216)
.+.|+..+....+.-+ +-.....+..+.-+.+|....+|... +.|+.|...|. +++.+..++ ++..+.+ +.
T Consensus 26 HPEGG~yret~rs~~~~~~~R~~~T~IYfLL~~g~~S~~HRv~-sdEiW~~~~G~pL~l~l~~~d--g~~~~~~LG~dv~ 102 (170)
T 1yud_A 26 HVEGGFYRSSYRSETAFDPSRQLWSSIYFLLRTGEVSHFHRLT-ADEMWYFHAGQSLTIYMISPE--GELTTAQLGLDLA 102 (170)
T ss_dssp CTTSSEEEEEEECSSBSSSSSBSCEEEEEEEETTCCEEEEECS-SCEEEEEEEESCEEEEEECTT--SCEEEEEESSCTT
T ss_pred CCCCceEEEeecCCCCCCCCCccceEEEEEECCCCCCeeEEcC-CCEEEEEEcCCCEEEEEEcCC--CCEEEEEeCCCcc
Confidence 4677777776655411 11222357788889999988888876 89999999998 477777664 4544444 56
Q ss_pred CCcE--EEEcCCCeEEEEECCCCcEEEEEEEeCCCCceeEeehhhhcCCCCCCHHHHHHHcCCCHHHHHHHh
Q 042226 144 KGDV--FVFPIGLVHFQRNVGHGNAFSISALSSQNPGVITIANAVFGSNPAIAADILAKAFQVDKSVVDQLQ 213 (216)
Q Consensus 144 ~GDv--~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~~~lf~~~p~~p~~vl~~af~~~~~~v~~l~ 213 (216)
+|+. ++||+|..+...+.+.+.+.+-++. .||+..-. |.- .+.+-|.+-|.--++.|++|-
T Consensus 103 ~Ge~pQ~vVP~G~wqaa~~~~g~~~LV~C~V---aPGF~f~d---fel---~~~~~L~~~~P~~~~~I~~lt 165 (170)
T 1yud_A 103 AGERPQFLVPKGCIFGSAMNQDGFSLVGCMV---SPGFTFDD---FEL---FSQEALLAMYPQHKAVVQKLS 165 (170)
T ss_dssp TTEESCEEECTTCEEEEEESSSSEEEEEEEE---SSCCCGGG---CCB---CBHHHHHHSCCTTHHHHTTSC
T ss_pred cCceeEEEECCCCEEEEEECCCCcEEEEEEE---CCCccCCc---eEE---cCHHHHHhHCchhHHHHHHhh
Confidence 7999 9999999999999833444444443 45543321 333 455666666766677777663
No 127
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.35 E-value=0.00079 Score=56.29 Aligned_cols=75 Identities=5% Similarity=-0.005 Sum_probs=54.4
Q ss_pred ceEEEEEEEcCCc--ccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEEC--CCCcE
Q 042226 91 GVSLARIDYAPWG--VVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNV--GHGNA 166 (216)
Q Consensus 91 gvs~~~~~l~pG~--~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~--g~~~a 166 (216)
++-+...++.... ..++|||. .-|++||.+|++. .+.+ .....+.+++||++++|+|..|.+... ++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~v~~G~~~-~i~~----~~~~~~~l~~g~l~~i~p~~~h~~~~~~~~~~~~ 79 (276)
T 3gbg_A 6 SFQTNVYRMSKFDTYIFNNLYIN-DYKMFWIDSGIAK-LIDK----NCLVSYEINSSSIILLKKNSIQRFSLTSLSDENI 79 (276)
T ss_dssp TEEEEEEEECTTCEEEEEEEECS-SCEEEEESSSCEE-EEET----TTTEEEEECTTEEEEECTTCEEEEEEEECCSSCE
T ss_pred hhhhhhhhhhcccchhccHhhhc-ceEEEEEecCceE-EECC----ccceeEEEcCCCEEEEcCCCceeeccccCCCcce
Confidence 3455666666654 35889999 6999999999999 7643 211157999999999999999998765 34444
Q ss_pred EEEEE
Q 042226 167 FSISA 171 (216)
Q Consensus 167 ~~l~~ 171 (216)
..+.+
T Consensus 80 ~~~~i 84 (276)
T 3gbg_A 80 NVSVI 84 (276)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44443
No 128
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=97.21 E-value=0.0013 Score=54.64 Aligned_cols=78 Identities=15% Similarity=0.192 Sum_probs=59.5
Q ss_pred CCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEc
Q 042226 72 LGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFP 151 (216)
Q Consensus 72 ~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P 151 (216)
.|..+..+.... +-.+..+.++||...++|.| .+.|+ +|++|++.- . ..++.+|+.+..|
T Consensus 133 ~Gv~~~~L~~~~-------~E~v~l~r~~~G~~~~~~~h-gG~Ei-lVL~G~~~d----~-------~~~~~~GsWlR~P 192 (223)
T 3o14_A 133 EGISTSLLHEDE-------RETVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVTV----N-------DEVLGRNAWLRLP 192 (223)
T ss_dssp TTEEEEEEEECS-------SCEEEEEEECTTCEEEECCS-SCEEE-EEEEEEEEE----T-------TEEECTTEEEEEC
T ss_pred CCeEEEEEecCC-------CcEEEEEEECCCCccCCCCC-CcEEE-EEEEeEEEE----C-------CceECCCeEEEeC
Confidence 455556665443 12456677899999999999 68997 999999763 2 2489999999999
Q ss_pred CCCeEEEEECCCCcEEEEE
Q 042226 152 IGLVHFQRNVGHGNAFSIS 170 (216)
Q Consensus 152 ~G~~H~~~N~g~~~a~~l~ 170 (216)
.|..|.... |++.+.++.
T Consensus 193 ~gs~h~~~a-g~~g~~i~~ 210 (223)
T 3o14_A 193 EGEALSATA-GARGAKIWM 210 (223)
T ss_dssp TTCCEEEEE-EEEEEEEEE
T ss_pred CCCccCcEE-CCCCeEEEE
Confidence 999999877 667777664
No 129
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=97.20 E-value=0.0019 Score=54.79 Aligned_cols=73 Identities=16% Similarity=0.263 Sum_probs=57.0
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcC--CCeEEEEECCC-CcEEEEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPI--GLVHFQRNVGH-GNAFSIS 170 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~--G~~H~~~N~g~-~~a~~l~ 170 (216)
+....+.||.-.++|-|..-+.+.||++|+++.. |+.+ + ..++++||+-+..+ |+.|...|..+ +++.++-
T Consensus 66 ln~~~~~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~G-n---~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~lQ 139 (256)
T 2vec_A 66 LNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYR--DSEG-N---HVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQ 139 (256)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEEESEEEEE--ETTS-C---EEEEETTEEEEECCCTTCCEEEEECCSSSCEEEEE
T ss_pred ccccccCCCCccCCcCCCCcEEEEEEEeeEEEEE--eCCC-C---EEEECCCeEEEEECCCCeEEEEEECCCCceEEEEE
Confidence 4566789998889999995444789999998875 4431 3 67999999999955 68999999764 6777776
Q ss_pred EE
Q 042226 171 AL 172 (216)
Q Consensus 171 ~~ 172 (216)
+.
T Consensus 140 lW 141 (256)
T 2vec_A 140 LW 141 (256)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 130
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=97.07 E-value=0.0054 Score=49.50 Aligned_cols=72 Identities=14% Similarity=0.068 Sum_probs=54.8
Q ss_pred cCCcccCCccC--CCccEEEEEEeCeEEEEEEecCCC----CceEEEEecC--CcEEEEcCCCeEEEEECCCCcEEEEEE
Q 042226 100 APWGVVPPHVH--PRATEILTVIEGSLEVGFVTSNPE----NRLITKVLQK--GDVFVFPIGLVHFQRNVGHGNAFSISA 171 (216)
Q Consensus 100 ~pG~~~ppH~H--p~a~Ei~yVl~G~~~~~~~~~~~~----~~~~~~~L~~--GDv~~~P~G~~H~~~N~g~~~a~~l~~ 171 (216)
.+|....+|+| ....++++|++|++.-.+++-..+ ++.....|.+ +..++||+|..|.+.+.+++ ++++..
T Consensus 56 ~~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~ 134 (185)
T 1ep0_A 56 VRGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDE-CIVNYK 134 (185)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEE
T ss_pred cCCeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEEe
Confidence 37888999999 667899999999986555554211 2456777765 68999999999999999877 555544
Q ss_pred E
Q 042226 172 L 172 (216)
Q Consensus 172 ~ 172 (216)
.
T Consensus 135 ~ 135 (185)
T 1ep0_A 135 C 135 (185)
T ss_dssp E
T ss_pred c
Confidence 3
No 131
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=96.96 E-value=0.0072 Score=48.74 Aligned_cols=72 Identities=13% Similarity=-0.003 Sum_probs=54.4
Q ss_pred cCCcccCCccC--CCccEEEEEEeCeEEEEEEecCCC----CceEEEEecC--CcEEEEcCCCeEEEEECCCCcEEEEEE
Q 042226 100 APWGVVPPHVH--PRATEILTVIEGSLEVGFVTSNPE----NRLITKVLQK--GDVFVFPIGLVHFQRNVGHGNAFSISA 171 (216)
Q Consensus 100 ~pG~~~ppH~H--p~a~Ei~yVl~G~~~~~~~~~~~~----~~~~~~~L~~--GDv~~~P~G~~H~~~N~g~~~a~~l~~ 171 (216)
.+|....+|+| .....+++|++|++.-.+++-..+ ++.....|.+ +..++||+|..|.+.+.+++ ++++..
T Consensus 57 ~~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~ 135 (184)
T 2ixk_A 57 ARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEY-AEFLYK 135 (184)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEE
T ss_pred CCCceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC-EEEEEe
Confidence 47888999999 667899999999986555553210 2456777765 68999999999999999877 555544
Q ss_pred E
Q 042226 172 L 172 (216)
Q Consensus 172 ~ 172 (216)
.
T Consensus 136 ~ 136 (184)
T 2ixk_A 136 T 136 (184)
T ss_dssp E
T ss_pred C
Confidence 3
No 132
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=96.93 E-value=0.0028 Score=52.99 Aligned_cols=80 Identities=19% Similarity=0.142 Sum_probs=57.0
Q ss_pred eEEEEEEEcCCcccCCccCCCccEEEEEEeC-eEEEEEEecCC-------------CCceE------EEEecCCcEEEEc
Q 042226 92 VSLARIDYAPWGVVPPHVHPRATEILTVIEG-SLEVGFVTSNP-------------ENRLI------TKVLQKGDVFVFP 151 (216)
Q Consensus 92 vs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G-~~~~~~~~~~~-------------~~~~~------~~~L~~GDv~~~P 151 (216)
..--.+.+.+|...|.|.|+.-.|-++..-| ++.+.+..+.+ +++.+ ...|++|+.+-++
T Consensus 106 YaeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl~ 185 (246)
T 3kmh_A 106 YAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICLP 185 (246)
T ss_dssp EEEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEEC
T ss_pred ceeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEecC
Confidence 4556677899999999999999999999888 55444333321 11111 3488999999999
Q ss_pred CCCeEEEEECCCC-cEEEEEE
Q 042226 152 IGLVHFQRNVGHG-NAFSISA 171 (216)
Q Consensus 152 ~G~~H~~~N~g~~-~a~~l~~ 171 (216)
+|+.|+++..+.. ++.+--+
T Consensus 186 Pg~~H~F~ae~g~G~vligEV 206 (246)
T 3kmh_A 186 PGLYHSFWAEAGFGDVLVGEV 206 (246)
T ss_dssp TTEEEEEEECTTSCCEEEEEE
T ss_pred CCCEEEEEecCCCccEEEEEc
Confidence 9999999887653 4444333
No 133
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=96.86 E-value=0.0091 Score=52.43 Aligned_cols=74 Identities=20% Similarity=0.191 Sum_probs=54.5
Q ss_pred EEEcC-CcccCCccCCCccEEEEEEeCeEEEEEE-ecCC-------------------------------CCceEEEEec
Q 042226 97 IDYAP-WGVVPPHVHPRATEILTVIEGSLEVGFV-TSNP-------------------------------ENRLITKVLQ 143 (216)
Q Consensus 97 ~~l~p-G~~~ppH~Hp~a~Ei~yVl~G~~~~~~~-~~~~-------------------------------~~~~~~~~L~ 143 (216)
+-+.| |+..++|+.+ ..-++..++|+=++.+. .+.. ....+..+|+
T Consensus 145 ~~~gp~g~~~~~H~D~-~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~ 223 (342)
T 1vrb_A 145 VYAAKNGGGFKAHFDA-YTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLT 223 (342)
T ss_dssp EEEECSSCCCCSEECS-SEEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEEC
T ss_pred EEEeCCCCCCCCeECC-hhcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEEC
Confidence 44555 7789999988 46788889999888776 3210 0123578999
Q ss_pred CCcEEEEcCCCeEEEEECCCCcEEEEEE
Q 042226 144 KGDVFVFPIGLVHFQRNVGHGNAFSISA 171 (216)
Q Consensus 144 ~GDv~~~P~G~~H~~~N~g~~~a~~l~~ 171 (216)
+||++++|+|.+|+..+.++++..-+++
T Consensus 224 pGD~LyiP~gwwH~v~s~~~~~slsvsi 251 (342)
T 1vrb_A 224 PGTMLYLPRGLWHSTKSDQATLALNITF 251 (342)
T ss_dssp TTCEEEECTTCEEEEECSSCEEEEEEEE
T ss_pred CCcEEEeCCCccEEEEECCCCceEEEEE
Confidence 9999999999999999986555555544
No 134
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=96.86 E-value=0.0066 Score=50.94 Aligned_cols=73 Identities=16% Similarity=0.149 Sum_probs=56.7
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcC--CCeEEEEECCC-CcEEEEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPI--GLVHFQRNVGH-GNAFSIS 170 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~--G~~H~~~N~g~-~~a~~l~ 170 (216)
+....+.||.-.++|-|..-+.+.||++|++.-. |+.+ + ..++++||+-..-+ |+.|.-.|..+ +++.++-
T Consensus 43 ~n~d~i~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~G-n---~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~lQ 116 (242)
T 1tq5_A 43 INDDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQ--DSMG-N---KEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQ 116 (242)
T ss_dssp EEEEEECTTCEEEEEEECSCEEEEEEEESEEEEE--ESSS-C---EEEEETTCEEEEECTTCEEEEEECCCSSCCEEEEE
T ss_pred eccceeCCCCcCCCcCCCCcEEEEEEEEeEEEEE--eCCC-C---cEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEE
Confidence 4456688998889999996555899999998875 4431 3 67999999999955 58999999764 6777776
Q ss_pred EE
Q 042226 171 AL 172 (216)
Q Consensus 171 ~~ 172 (216)
+.
T Consensus 117 lW 118 (242)
T 1tq5_A 117 IW 118 (242)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 135
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=96.80 E-value=0.0088 Score=49.06 Aligned_cols=70 Identities=13% Similarity=0.159 Sum_probs=53.7
Q ss_pred cCCcccCCccCC---CccEEEEEEeCeEEEEEEecCCC----CceEEEEecC--CcEEEEcCCCeEEEEECCCCcEEEEE
Q 042226 100 APWGVVPPHVHP---RATEILTVIEGSLEVGFVTSNPE----NRLITKVLQK--GDVFVFPIGLVHFQRNVGHGNAFSIS 170 (216)
Q Consensus 100 ~pG~~~ppH~Hp---~a~Ei~yVl~G~~~~~~~~~~~~----~~~~~~~L~~--GDv~~~P~G~~H~~~N~g~~~a~~l~ 170 (216)
.+|.+..+|+|. ...++++|++|++.-.+++-..+ ++.....|.+ +..++||+|..|.+.+.+++ +.++.
T Consensus 78 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~-a~~~Y 156 (205)
T 3ryk_A 78 EAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPH-TIVMY 156 (205)
T ss_dssp STTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSS-EEEEE
T ss_pred CCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCC-EEEEE
Confidence 578899999995 36899999999976656653211 3456778875 79999999999999999876 44443
No 136
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=96.74 E-value=0.0039 Score=50.53 Aligned_cols=67 Identities=16% Similarity=0.411 Sum_probs=49.4
Q ss_pred EEEEcCC-cccCCccCCCccEEEEEEeCeEEEEEEecCC--------------------------------CCceEEEEe
Q 042226 96 RIDYAPW-GVVPPHVHPRATEILTVIEGSLEVGFVTSNP--------------------------------ENRLITKVL 142 (216)
Q Consensus 96 ~~~l~pG-~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~--------------------------------~~~~~~~~L 142 (216)
.+-+.++ +..++|+.+ ..-++.+++|+=+..+..+.. ..+.++.+|
T Consensus 127 ~~wiG~~gs~t~~H~D~-~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l 205 (235)
T 4gjz_A 127 NAWFGPQGTISPLHQDP-QQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCIL 205 (235)
T ss_dssp EEEEECTTCEEEEECCS-SEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEE
T ss_pred EEEEeCCCCCceeeecc-ccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEE
Confidence 3445554 456778777 467888999998888764320 012356799
Q ss_pred cCCcEEEEcCCCeEEEEECCC
Q 042226 143 QKGDVFVFPIGLVHFQRNVGH 163 (216)
Q Consensus 143 ~~GDv~~~P~G~~H~~~N~g~ 163 (216)
++||+++||+|..|...|.+.
T Consensus 206 ~pGD~LyiP~gW~H~V~~l~~ 226 (235)
T 4gjz_A 206 SPGEILFIPVKYWHYVRALDL 226 (235)
T ss_dssp CTTCEEEECTTCEEEEEESSS
T ss_pred CCCCEEEeCCCCcEEEEECCC
Confidence 999999999999999999853
No 137
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=96.74 E-value=0.016 Score=46.62 Aligned_cols=71 Identities=13% Similarity=0.013 Sum_probs=53.6
Q ss_pred cCCcccCCccCC---CccEEEEEEeCeEEEEEEecCCC----CceEEEEecC--CcEEEEcCCCeEEEEECCCCcEEEEE
Q 042226 100 APWGVVPPHVHP---RATEILTVIEGSLEVGFVTSNPE----NRLITKVLQK--GDVFVFPIGLVHFQRNVGHGNAFSIS 170 (216)
Q Consensus 100 ~pG~~~ppH~Hp---~a~Ei~yVl~G~~~~~~~~~~~~----~~~~~~~L~~--GDv~~~P~G~~H~~~N~g~~~a~~l~ 170 (216)
.+|....+|+|. ....+++|++|++.-.+++-..+ ++.....|.+ +..++||+|..|.+.+.+++ ++++.
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (183)
T 1dzr_A 55 KKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEY-AEFLY 133 (183)
T ss_dssp ETTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred CCCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEE
Confidence 378889999995 57899999999986555553211 3456677765 58999999999999999877 44444
Q ss_pred E
Q 042226 171 A 171 (216)
Q Consensus 171 ~ 171 (216)
.
T Consensus 134 ~ 134 (183)
T 1dzr_A 134 K 134 (183)
T ss_dssp E
T ss_pred E
Confidence 3
No 138
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=96.74 E-value=0.011 Score=44.91 Aligned_cols=68 Identities=19% Similarity=0.264 Sum_probs=51.8
Q ss_pred cCCcccCCc----cCCCccEEEEEEeCeEEEEEEecCCCC-c-eEEEEecCCcEEEEcCCCeEEEEECCCCcEEEE
Q 042226 100 APWGVVPPH----VHPRATEILTVIEGSLEVGFVTSNPEN-R-LITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSI 169 (216)
Q Consensus 100 ~pG~~~ppH----~Hp~a~Ei~yVl~G~~~~~~~~~~~~~-~-~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 169 (216)
-|++..+.| +|+...+.+.|++|++++...++++ + . .......+|+..++|++.+|.++-.++ ++.+.
T Consensus 22 lP~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g-~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsd-d~~f~ 95 (127)
T 3bb6_A 22 APAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEH-SAEPDQVILIEAGQFAVFPPEKWHNIEAMTD-DTYFN 95 (127)
T ss_dssp SCGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTT-CSSCSEEEEEEBTBEEECCSSCEEEEEESST-TCEEE
T ss_pred ChHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCC-CcceeEEEEeCCCCceEECCCCcEEEEEcCC-CEEEE
Confidence 356778899 5887778999999999998655432 2 1 235677999999999999999998665 55553
No 139
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=96.70 E-value=0.017 Score=47.04 Aligned_cols=71 Identities=14% Similarity=0.080 Sum_probs=53.4
Q ss_pred cCCcccCCccCCC---ccEEEEEEeCeEEEEEEecCCC----CceEEEEecC--CcEEEEcCCCeEEEEECCCCcEEEEE
Q 042226 100 APWGVVPPHVHPR---ATEILTVIEGSLEVGFVTSNPE----NRLITKVLQK--GDVFVFPIGLVHFQRNVGHGNAFSIS 170 (216)
Q Consensus 100 ~pG~~~ppH~Hp~---a~Ei~yVl~G~~~~~~~~~~~~----~~~~~~~L~~--GDv~~~P~G~~H~~~N~g~~~a~~l~ 170 (216)
.+|.+..+|+|.. ...+++|++|++...+++-..+ ++.....|.+ +..++||+|..|.+.+.+++ +.++.
T Consensus 73 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~-a~~ly 151 (196)
T 1wlt_A 73 RKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDS-IVIYF 151 (196)
T ss_dssp CTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSE-EEEEE
T ss_pred CCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEE
Confidence 5788899999974 5899999999996555553211 3356778875 79999999999999999874 44443
Q ss_pred E
Q 042226 171 A 171 (216)
Q Consensus 171 ~ 171 (216)
.
T Consensus 152 ~ 152 (196)
T 1wlt_A 152 I 152 (196)
T ss_dssp E
T ss_pred E
Confidence 3
No 140
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=96.60 E-value=0.012 Score=47.96 Aligned_cols=71 Identities=11% Similarity=0.081 Sum_probs=55.0
Q ss_pred cCCcccCCccCCCccEEEEEEe-CeEEEEEEecCCC---CceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEEE
Q 042226 100 APWGVVPPHVHPRATEILTVIE-GSLEVGFVTSNPE---NRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISAL 172 (216)
Q Consensus 100 ~pG~~~ppH~Hp~a~Ei~yVl~-G~~~~~~~~~~~~---~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~ 172 (216)
.+|.+..+|.|+ ...+++|++ |++...+++-.++ ++.....|..+..++||+|..|.+.+.+++ ++++...
T Consensus 68 ~~GvlRGlH~h~-q~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~-a~~~y~~ 142 (197)
T 1nxm_A 68 RKNVLRGLHAEP-WDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDF-VAYSYLV 142 (197)
T ss_dssp ETTBEEEEEECS-SCEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSE-EEEEEEE
T ss_pred CCCCcceeeecc-cceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCC-eEEEEEC
Confidence 678889999996 789999999 9975555553110 345678999999999999999999998766 5554443
No 141
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=96.48 E-value=0.03 Score=45.80 Aligned_cols=72 Identities=10% Similarity=0.030 Sum_probs=53.8
Q ss_pred cCCcccCCccCCC---ccEEEEEEeCeEEEEEEecCCC----CceEEEEecC--CcEEEEcCCCeEEEEECCCCcEEEEE
Q 042226 100 APWGVVPPHVHPR---ATEILTVIEGSLEVGFVTSNPE----NRLITKVLQK--GDVFVFPIGLVHFQRNVGHGNAFSIS 170 (216)
Q Consensus 100 ~pG~~~ppH~Hp~---a~Ei~yVl~G~~~~~~~~~~~~----~~~~~~~L~~--GDv~~~P~G~~H~~~N~g~~~a~~l~ 170 (216)
.+|.+..+|+|.. ...+++|++|++.-.+++-..+ ++.....|.+ +..++||+|..|.+.+.+++ ++++.
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (205)
T 1oi6_A 55 KRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDD-TVMSY 133 (205)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTT-EEEEE
T ss_pred CCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCC-eEEEE
Confidence 5788899999964 5899999999986555553211 2356778866 58999999999999999877 44444
Q ss_pred EE
Q 042226 171 AL 172 (216)
Q Consensus 171 ~~ 172 (216)
..
T Consensus 134 ~~ 135 (205)
T 1oi6_A 134 ML 135 (205)
T ss_dssp EE
T ss_pred ec
Confidence 33
No 142
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=96.40 E-value=0.015 Score=51.16 Aligned_cols=75 Identities=17% Similarity=0.242 Sum_probs=55.1
Q ss_pred EEEcC-CcccCCccCCCccEEEEEEeCeEEEEEEecC------------------------CC---------CceEEEEe
Q 042226 97 IDYAP-WGVVPPHVHPRATEILTVIEGSLEVGFVTSN------------------------PE---------NRLITKVL 142 (216)
Q Consensus 97 ~~l~p-G~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~------------------------~~---------~~~~~~~L 142 (216)
+-+.+ |...++|+.+ ..-+..+++|+=++.+..+. ++ .+.+..+|
T Consensus 187 l~iG~~gs~t~~H~D~-~~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l 265 (349)
T 3d8c_A 187 LLIGMEGNVTPAHYGE-QQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVV 265 (349)
T ss_dssp EEEECTTCEEEEECCS-EEEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEE
T ss_pred EEEECCCCCccceECC-hhcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEE
Confidence 44554 5678999988 47788899999888765432 00 13468899
Q ss_pred cCCcEEEEcCCCeEEEEECCC-CcEEEEEEE
Q 042226 143 QKGDVFVFPIGLVHFQRNVGH-GNAFSISAL 172 (216)
Q Consensus 143 ~~GDv~~~P~G~~H~~~N~g~-~~a~~l~~~ 172 (216)
++||+++||+|..|...|.++ +..+.+...
T Consensus 266 ~pGD~LyiP~gWwH~V~~l~d~~~sisvn~w 296 (349)
T 3d8c_A 266 GPGDVLYIPMYWWHHIESLLNGGITITVNFW 296 (349)
T ss_dssp CTTCEEEECTTCEEEEEECTTSCCEEEEEEE
T ss_pred CCCCEEEECCCCcEEEEEcCCCCcEEEEEEE
Confidence 999999999999999999873 444555443
No 143
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=96.35 E-value=0.031 Score=46.14 Aligned_cols=70 Identities=13% Similarity=-0.034 Sum_probs=52.6
Q ss_pred cCCcccCCccCCC---ccEEEEEEeCeEEEEEEecCCC----CceEEEEecC--CcEEEEcCCCeEEEEECCCCcEEEEE
Q 042226 100 APWGVVPPHVHPR---ATEILTVIEGSLEVGFVTSNPE----NRLITKVLQK--GDVFVFPIGLVHFQRNVGHGNAFSIS 170 (216)
Q Consensus 100 ~pG~~~ppH~Hp~---a~Ei~yVl~G~~~~~~~~~~~~----~~~~~~~L~~--GDv~~~P~G~~H~~~N~g~~~a~~l~ 170 (216)
.+|.+..+|+|.. ...+++|++|++.-.+++-..+ ++.....|.+ +..++||+|..|.+.+.+++ ++++.
T Consensus 63 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a~~ly 141 (216)
T 2c0z_A 63 VRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDE-ATLCY 141 (216)
T ss_dssp ETTBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred CCCcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCC-eEEEE
Confidence 4788899999974 5899999999986555553211 3456777766 48999999999999999877 44444
No 144
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=96.29 E-value=0.047 Score=45.33 Aligned_cols=70 Identities=14% Similarity=0.065 Sum_probs=52.6
Q ss_pred cCCcccCCccCCC---ccEEEEEEeCeEEEEEEecCCC----CceEEEEecC--CcEEEEcCCCeEEEEECCCCcEEEEE
Q 042226 100 APWGVVPPHVHPR---ATEILTVIEGSLEVGFVTSNPE----NRLITKVLQK--GDVFVFPIGLVHFQRNVGHGNAFSIS 170 (216)
Q Consensus 100 ~pG~~~ppH~Hp~---a~Ei~yVl~G~~~~~~~~~~~~----~~~~~~~L~~--GDv~~~P~G~~H~~~N~g~~~a~~l~ 170 (216)
.+|.+..+|+|.. ...+++|++|++.-.+++-..+ ++.....|.+ +..++||+|..|.+.+.+++ ++++.
T Consensus 74 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a~vly 152 (225)
T 1upi_A 74 SAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDN-STVMY 152 (225)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSS-EEEEE
T ss_pred CCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCC-EEEEE
Confidence 5788899999964 5899999999986555543210 3356677765 58999999999999999877 44444
No 145
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=96.18 E-value=0.059 Score=43.97 Aligned_cols=72 Identities=7% Similarity=-0.044 Sum_probs=54.3
Q ss_pred cCCcccCCccCC---CccEEEEEEeCeEEEEEEecCCC----CceEEEEecC--CcEEEEcCCCeEEEEECCCCcEEEEE
Q 042226 100 APWGVVPPHVHP---RATEILTVIEGSLEVGFVTSNPE----NRLITKVLQK--GDVFVFPIGLVHFQRNVGHGNAFSIS 170 (216)
Q Consensus 100 ~pG~~~ppH~Hp---~a~Ei~yVl~G~~~~~~~~~~~~----~~~~~~~L~~--GDv~~~P~G~~H~~~N~g~~~a~~l~ 170 (216)
.+|.+..+|+|. ....+++|++|++.-.++|-..+ ++.....|.+ +..++||+|..|.+.+.+++...++-
T Consensus 52 ~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~a~~~Y~ 131 (201)
T 4hn1_A 52 HRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDDATLVFL 131 (201)
T ss_dssp CTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTTEEEEEE
T ss_pred CCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCCeEEEEe
Confidence 678889999985 57899999999987767663211 3445677765 78999999999999999876443333
Q ss_pred E
Q 042226 171 A 171 (216)
Q Consensus 171 ~ 171 (216)
+
T Consensus 132 ~ 132 (201)
T 4hn1_A 132 C 132 (201)
T ss_dssp E
T ss_pred C
Confidence 3
No 146
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=95.95 E-value=0.081 Score=44.85 Aligned_cols=86 Identities=21% Similarity=0.206 Sum_probs=66.3
Q ss_pred CCCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEE
Q 042226 70 NPLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFV 149 (216)
Q Consensus 70 ~~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~ 149 (216)
|...++.+.++. .+-|-|-.++.++|+-..|+-.|.-..| +||++|++.++ ...+.+|...+
T Consensus 75 ~~~~gs~RlLs~------~d~GaSTl~V~fpp~~~~P~Gi~~ad~E-~fVL~G~i~~G-----------~~~l~~h~Y~f 136 (303)
T 2qdr_A 75 NIAPGSRRLLTW------HDSGASTSRVVLPPKFEAPSGIFTADLE-IFVIKGAIQLG-----------EWQLNKHSYSF 136 (303)
T ss_dssp TSCCEEEEEEEE------CTTSCEEEEEEECTTCEECCBEESSCEE-EEEEESEEEET-----------TEEECTTEEEE
T ss_pred CcCccceeeccc------CCCCcceEEEEecCCCCCCCcccccceE-EEEEEeEEEeC-----------CEEecCCceEE
Confidence 445566666654 3346788999999999999988886677 89999999983 25899999999
Q ss_pred EcCCCeE-EEEECCCCcEEEEEEEe
Q 042226 150 FPIGLVH-FQRNVGHGNAFSISALS 173 (216)
Q Consensus 150 ~P~G~~H-~~~N~g~~~a~~l~~~~ 173 (216)
+|+|+.- .+.-.|++++.++...+
T Consensus 137 ~PaGV~~~~~kv~~~~g~~iL~fe~ 161 (303)
T 2qdr_A 137 IPAGVRIGSWKVLGGEEAEILWMEN 161 (303)
T ss_dssp ECTTCCBCCEEEETTSCEEEEEEEC
T ss_pred ecCCCccCceeecCCCCcEEEEEec
Confidence 9999844 44555888888887743
No 147
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=95.83 E-value=0.031 Score=48.84 Aligned_cols=72 Identities=17% Similarity=0.189 Sum_probs=52.4
Q ss_pred EEEcC-CcccCCccCCCccEEEEEEeCeEEEEEEecC-------------------CC---------CceEEEEecCCcE
Q 042226 97 IDYAP-WGVVPPHVHPRATEILTVIEGSLEVGFVTSN-------------------PE---------NRLITKVLQKGDV 147 (216)
Q Consensus 97 ~~l~p-G~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~-------------------~~---------~~~~~~~L~~GDv 147 (216)
+-+.| |+..++|+.+ ..-++..++|+=++.+..+. ++ .+.++.+|++||+
T Consensus 171 l~~g~~g~~~~~H~D~-~~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD~ 249 (338)
T 3al5_A 171 FRISSPGLQLWTHYDV-MDNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDV 249 (338)
T ss_dssp EEEECTTCEEEEECCS-SEEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTCE
T ss_pred eEECCCCCCccceECC-cccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCCE
Confidence 33444 5567889888 46778889999888766431 00 1246889999999
Q ss_pred EEEcCCCeEEEEECCCCcEEEEEE
Q 042226 148 FVFPIGLVHFQRNVGHGNAFSISA 171 (216)
Q Consensus 148 ~~~P~G~~H~~~N~g~~~a~~l~~ 171 (216)
++||+|..|...|.+ ..+.+.+
T Consensus 250 LyiP~gWwH~v~~l~--~sisvn~ 271 (338)
T 3al5_A 250 LFIPALWFHNVISEE--FGVGVNI 271 (338)
T ss_dssp EEECTTCEEEEEESS--CEEEEEE
T ss_pred EEECCCCeEEEeeCC--CEEEEEE
Confidence 999999999999984 4555554
No 148
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=95.56 E-value=0.099 Score=44.54 Aligned_cols=71 Identities=28% Similarity=0.312 Sum_probs=55.5
Q ss_pred EEEEEEcCCcccCCccCCCccE-EEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcC--CCeEEEEECCCCcEEEEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATE-ILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPI--GLVHFQRNVGHGNAFSIS 170 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~E-i~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~--G~~H~~~N~g~~~a~~l~ 170 (216)
+.. ...++.-.++|-|.. .| +.||++|++.-. |+. +. ..++++||+=..-+ |+.|.-.|..++++..+-
T Consensus 42 ld~-~~~~~~gf~~HPHrg-~EtVTyvl~G~~~H~--DS~--Gn--~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQ 113 (277)
T 2p17_A 42 LME-DIFERGTFDVHPHRG-IETVTYVISGELEHF--DSK--AG--HSTLGPGDVQWMTAGRGVVHKEDPASGSTVHSLQ 113 (277)
T ss_dssp EEE-EEECTTCCCCEEECS-EEEEEEEEESCEEEE--ETT--TE--EEEECTTCEEEEECTTCEEEEEEECTTCCEEEEE
T ss_pred Eec-CCCCCCCCCCCCCCC-cEEEEEEEEeEEEEe--eCC--CC--ceEECCCeEEEEeCCCCEEEEeecCCCCCEEEEE
Confidence 344 567788899999995 56 699999998874 443 22 67999999999987 578999998777777776
Q ss_pred EE
Q 042226 171 AL 172 (216)
Q Consensus 171 ~~ 172 (216)
+.
T Consensus 114 lW 115 (277)
T 2p17_A 114 LW 115 (277)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 149
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=95.53 E-value=0.059 Score=48.94 Aligned_cols=65 Identities=22% Similarity=0.389 Sum_probs=48.1
Q ss_pred EEEcCCc-c-cCCccCCCccEEEEEEeCeEEEEEEecCC--------------CCceEEEEecCCcEEEEcCCCeEEEEE
Q 042226 97 IDYAPWG-V-VPPHVHPRATEILTVIEGSLEVGFVTSNP--------------ENRLITKVLQKGDVFVFPIGLVHFQRN 160 (216)
Q Consensus 97 ~~l~pG~-~-~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~--------------~~~~~~~~L~~GDv~~~P~G~~H~~~N 160 (216)
+-+.|++ . .++|+-. ..-++..++|+=+..+..+.. ....+..+|++||++|+|+|.+|+...
T Consensus 143 ~y~~~~g~~g~~~H~D~-~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~s 221 (442)
T 2xdv_A 143 VYITPAGSQGLPPHYDD-VEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADT 221 (442)
T ss_dssp EEEECTTCBCSCSEECS-SEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEEC
T ss_pred eEECCCCCCCccceECC-cceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEEe
Confidence 3445554 3 3799977 577888899998887765420 011357899999999999999999988
Q ss_pred CC
Q 042226 161 VG 162 (216)
Q Consensus 161 ~g 162 (216)
.+
T Consensus 222 ~~ 223 (442)
T 2xdv_A 222 PA 223 (442)
T ss_dssp CS
T ss_pred cC
Confidence 75
No 150
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=95.32 E-value=0.15 Score=46.91 Aligned_cols=74 Identities=18% Similarity=0.325 Sum_probs=51.8
Q ss_pred EEEcCCcc--cCCccCCCccEEEEEEeCeEEEEEEecCC------------------CCceEEEEecCCcEEEEcCCCeE
Q 042226 97 IDYAPWGV--VPPHVHPRATEILTVIEGSLEVGFVTSNP------------------ENRLITKVLQKGDVFVFPIGLVH 156 (216)
Q Consensus 97 ~~l~pG~~--~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~------------------~~~~~~~~L~~GDv~~~P~G~~H 156 (216)
+-+.|++. .++|+-+ -.-++.-++|+=+..+..+.. .......+|++||++++|+|.+|
T Consensus 168 ~Y~tp~Gs~g~~pH~D~-~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~H 246 (489)
T 4diq_A 168 VYLTPPNSQGFAPHYDD-IEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFIH 246 (489)
T ss_dssp EEEECSSBCCSCCBCCS-SEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCEE
T ss_pred EEecCCCcccccCccCC-cceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCce
Confidence 44555553 5799888 466777788887777765320 01235789999999999999999
Q ss_pred EEEECCCCcEEEEEE
Q 042226 157 FQRNVGHGNAFSISA 171 (216)
Q Consensus 157 ~~~N~g~~~a~~l~~ 171 (216)
+..+.+++...-+.+
T Consensus 247 ~~~s~~~~~SlhlTi 261 (489)
T 4diq_A 247 QAECQDGVHSLHLTL 261 (489)
T ss_dssp EEEBCSSCCEEEEEE
T ss_pred EEEecCCCceEEEee
Confidence 999987654444443
No 151
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=95.05 E-value=0.032 Score=48.03 Aligned_cols=74 Identities=18% Similarity=0.227 Sum_probs=49.5
Q ss_pred eEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecC-C------CCceEEEEecCCcEEEEcCCCeEEEEECCCC
Q 042226 92 VSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSN-P------ENRLITKVLQKGDVFVFPIGLVHFQRNVGHG 164 (216)
Q Consensus 92 vs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~-~------~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~ 164 (216)
+..+|+.+.||+.+.+|.=+ .|+....+|..++.+.-.. + +++ .+.+++|+++++....+|+..|.|++
T Consensus 91 l~~vRlrL~PG~~I~~HrD~--~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~--~~~m~~GE~w~~d~~~~H~v~N~g~~ 166 (290)
T 1e5r_A 91 LQMARSRNLKNAIVIPHRDF--VELDREVDRYFRTFMVLEDSPLAFHSNEDT--VIHMRPGEIWFLDAATVHSAVNFSEI 166 (290)
T ss_dssp EEEEEEEEEESEEEEEECCC----------CBCCEEEECSCCTTEEEEETTE--EECCCTTEEEECCTTSCEEEEESSSS
T ss_pred hheEEEEeCCCCEeeCccCc--cccccccCCceEEEeeEecCCCcEEEECCE--EEecCCCCEEEEcCCCeeEEEcCCCC
Confidence 47788899999999998544 3555455777766553221 1 133 67899999999999999999999985
Q ss_pred c-EEEE
Q 042226 165 N-AFSI 169 (216)
Q Consensus 165 ~-a~~l 169 (216)
+ ..++
T Consensus 167 ~RIhLv 172 (290)
T 1e5r_A 167 SRQSLC 172 (290)
T ss_dssp CCCEEE
T ss_pred CeEEEE
Confidence 4 3443
No 152
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=94.96 E-value=0.041 Score=50.19 Aligned_cols=77 Identities=19% Similarity=0.136 Sum_probs=54.5
Q ss_pred cCCcccCCccCCCcc-EEEEEEeCeEEEEEEecCC-----------------------CCceEEEEecCCcEEEEcCCCe
Q 042226 100 APWGVVPPHVHPRAT-EILTVIEGSLEVGFVTSNP-----------------------ENRLITKVLQKGDVFVFPIGLV 155 (216)
Q Consensus 100 ~pG~~~ppH~Hp~a~-Ei~yVl~G~~~~~~~~~~~-----------------------~~~~~~~~L~~GDv~~~P~G~~ 155 (216)
.+|...+.|+.+.++ -+..+++|+=+..+..+.. ..+.+..++++||+++||.|..
T Consensus 204 p~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~~~v~l~pGE~LfIPsGWw 283 (451)
T 2yu1_A 204 VRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDCQRIELKQGYTFVIPSGWI 283 (451)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCCEEEEECTTCEEEECTTCE
T ss_pred cCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccceEEEECCCcEEEeCCCce
Confidence 446678999998654 4678999998887765431 0134678999999999999999
Q ss_pred EEEEECCCCcEEEEEEEeCCC
Q 042226 156 HFQRNVGHGNAFSISALSSQN 176 (216)
Q Consensus 156 H~~~N~g~~~a~~l~~~~s~~ 176 (216)
|...|..+.-++---.+++.|
T Consensus 284 H~V~nledsIait~NF~~~~n 304 (451)
T 2yu1_A 284 HAVYTPTDTLVFGGNFLHSFN 304 (451)
T ss_dssp EEEECSSCEEEEEEEECCSSS
T ss_pred EEEecCCCeEEEeeeeCCccc
Confidence 999998654333223334443
No 153
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=94.79 E-value=0.12 Score=45.34 Aligned_cols=67 Identities=16% Similarity=0.245 Sum_probs=49.4
Q ss_pred EEEcC-CcccCCccCCCcc-EEEEEEeCeEEEEEEecCC-------------------------------------CCce
Q 042226 97 IDYAP-WGVVPPHVHPRAT-EILTVIEGSLEVGFVTSNP-------------------------------------ENRL 137 (216)
Q Consensus 97 ~~l~p-G~~~ppH~Hp~a~-Ei~yVl~G~~~~~~~~~~~-------------------------------------~~~~ 137 (216)
+-+.+ |...++|+++..+ -+..++.|+=++.+..+.. ..+.
T Consensus 176 ~~~G~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~~~~~~~~~~~~w~~~~~P~~~~~~~p~~~~~ 255 (336)
T 3k2o_A 176 FVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFKP 255 (336)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHHHHGGGTTCHHHHHHHTGGGGGSTTSCGGGCC
T ss_pred EEECCCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCcccccCCCccchhhhhhhhCcchhhhcccccCce
Confidence 33444 4567899998543 5888999987777654320 0122
Q ss_pred EEEEecCCcEEEEcCCCeEEEEECCC
Q 042226 138 ITKVLQKGDVFVFPIGLVHFQRNVGH 163 (216)
Q Consensus 138 ~~~~L~~GDv~~~P~G~~H~~~N~g~ 163 (216)
+..++++||++++|+|..|...|.++
T Consensus 256 ~~~~l~pGd~l~iP~gw~H~v~~~~~ 281 (336)
T 3k2o_A 256 LEILQKPGETVFVPGGWWHVVLNLDT 281 (336)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSC
T ss_pred EEEEECCCCEEEeCCCCcEEEecCCC
Confidence 57889999999999999999999875
No 154
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=94.75 E-value=0.2 Score=42.98 Aligned_cols=84 Identities=18% Similarity=0.220 Sum_probs=61.7
Q ss_pred EEEEEEEcCCcccCCccCCCccE-EEEEE-eCeEEEEEEecCCCCceEEEEecCCcEEEEcC--CCeEEEEECCCCcEEE
Q 042226 93 SLARIDYAPWGVVPPHVHPRATE-ILTVI-EGSLEVGFVTSNPENRLITKVLQKGDVFVFPI--GLVHFQRNVGHGNAFS 168 (216)
Q Consensus 93 s~~~~~l~pG~~~ppH~Hp~a~E-i~yVl-~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~--G~~H~~~N~g~~~a~~ 168 (216)
-+....+.|+.-.++|-|. ..| +.||+ +|++.-. |+.+ + ..++++||+-..-+ |+.|.-.|..++++..
T Consensus 41 ~ld~~~~~~~~Gf~~HPHr-g~EtVTyvl~~G~~~H~--DS~G-n---~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~ 113 (290)
T 1j1l_A 41 LFDEFKGGRPGGFPDHPHR-GFETVSYLLEGGSMAHE--DFCG-H---TGKMNPGDLQWMTAGRGILHAEMPCSEEPAHG 113 (290)
T ss_dssp EEEEEEECTTCBEEEEEEB-SEEEEEEECSSSCEEEE--ETTS-C---EEEECTTCEEEEECTTCEEEEEEECSSSCEEE
T ss_pred EEEccccCCCCCCCCCCCC-CeEEEEEECcceEEEEe--eCCC-C---ceEECCCcEEEEeCCCCEEEEeEcCCCCCEEE
Confidence 4455567888778999999 466 68999 9999875 4442 3 67999999999986 5789999987777777
Q ss_pred EEEEe---C----CCCceeEee
Q 042226 169 ISALS---S----QNPGVITIA 183 (216)
Q Consensus 169 l~~~~---s----~~pg~~~~~ 183 (216)
+-+.- . ..|..+.+.
T Consensus 114 lQlWvnLP~~~k~~~P~y~~~~ 135 (290)
T 1j1l_A 114 LQLWVNLRSSEKMVEPQYQELK 135 (290)
T ss_dssp EEEEEECCGGGTTSCCEEEEEC
T ss_pred EEEEecCChhhcCCCCcceecc
Confidence 76552 1 236666653
No 155
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=94.53 E-value=0.062 Score=49.45 Aligned_cols=64 Identities=14% Similarity=0.153 Sum_probs=49.5
Q ss_pred cCCcccCCccCCCcc-EEEEEEeCeEEEEEEecCC-----------------------CCceEEEEecCCcEEEEcCCCe
Q 042226 100 APWGVVPPHVHPRAT-EILTVIEGSLEVGFVTSNP-----------------------ENRLITKVLQKGDVFVFPIGLV 155 (216)
Q Consensus 100 ~pG~~~ppH~Hp~a~-Ei~yVl~G~~~~~~~~~~~-----------------------~~~~~~~~L~~GDv~~~P~G~~ 155 (216)
.+|...+.|..+.++ -+..+++|+=++.+..+.. ..+.+..++++||+++||.|.+
T Consensus 274 ~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIPsGWw 353 (488)
T 3kv5_D 274 VQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWI 353 (488)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeCCCce
Confidence 446678999998544 3568999998888775420 0234678999999999999999
Q ss_pred EEEEECCC
Q 042226 156 HFQRNVGH 163 (216)
Q Consensus 156 H~~~N~g~ 163 (216)
|+..|..+
T Consensus 354 H~V~nled 361 (488)
T 3kv5_D 354 HAVLTSQD 361 (488)
T ss_dssp EEEEEEEE
T ss_pred EEeeCCCC
Confidence 99999744
No 156
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=94.42 E-value=0.16 Score=46.27 Aligned_cols=57 Identities=9% Similarity=0.031 Sum_probs=44.9
Q ss_pred CCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEE
Q 042226 106 PPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISA 171 (216)
Q Consensus 106 ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~ 171 (216)
..-...+++|++++-+|++++.- +- + ...+++||+++||+|+.+.+.-.+ +++.+++
T Consensus 171 ~~f~NaDGD~Livpq~G~l~i~T--Ef--G---~L~v~pgei~VIPRGi~frv~l~~--p~Rgyi~ 227 (471)
T 1eyb_A 171 RCFYNSDGDFLIVPQKGNLLIYT--EF--G---KMLVQPNEICVIQRGMRFSIDVFE--ETRGYIL 227 (471)
T ss_dssp EEEEESSEEEEEEEEESCEEEEE--TT--E---EEEECTTEEEEECTTCCEEEECSS--SEEEEEE
T ss_pred ceeecCCCCEEEEEEeCCEEEEE--ec--c---cEEeccCCEEEECCccEEEEeeCC--CceEEEE
Confidence 34456679999999999999864 22 3 568999999999999999986655 7766654
No 157
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=94.35 E-value=0.35 Score=41.08 Aligned_cols=81 Identities=17% Similarity=0.251 Sum_probs=52.3
Q ss_pred eEEEEEEEcCCcc---cCCccCCCc--c------EEEEE-Ee---CeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeE
Q 042226 92 VSLARIDYAPWGV---VPPHVHPRA--T------EILTV-IE---GSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVH 156 (216)
Q Consensus 92 vs~~~~~l~pG~~---~ppH~Hp~a--~------Ei~yV-l~---G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H 156 (216)
+-+..+ +.|||. -|||.|++. . |+.|. +. |-+...+..++++.. ....++-||++.+|+|. |
T Consensus 153 LlvgEv-~tpgG~WSSyPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d~~~d-e~~~V~~~d~VlvP~Gy-H 229 (270)
T 2qjv_A 153 LLVVEV-YTNAGATSSWPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDRSLD-ECMAVYNRDVVXVPXGY-H 229 (270)
T ss_dssp CEEEEE-EECTTCEESCSCEECEEEETTTEEECEEEEEEEEESTTCEEEEEEECTTSSSE-EEEEEETTCEEEESSSB-C
T ss_pred EEEEEE-EcCCCccccCCCcccccccCcccccceeEEEEECCCCCCEEEEEEeCCCCCCc-eEEEEECCCEEecCCCc-C
Confidence 455655 777764 499999964 4 88765 33 455444433221111 26899999999999999 9
Q ss_pred EEEECCCCcEEEEEEEeCC
Q 042226 157 FQRNVGHGNAFSISALSSQ 175 (216)
Q Consensus 157 ~~~N~g~~~a~~l~~~~s~ 175 (216)
.....-.....++-++-.+
T Consensus 230 p~~a~pGy~~YylwvMaG~ 248 (270)
T 2qjv_A 230 PVATIAGYDNYYLNVMAGP 248 (270)
T ss_dssp CEEECTTCEEEEEEEEECS
T ss_pred CCcCCCCcccEEEEEEECC
Confidence 8655534455566666543
No 158
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=94.33 E-value=0.13 Score=46.73 Aligned_cols=65 Identities=12% Similarity=0.131 Sum_probs=49.7
Q ss_pred cCCcccCCccCCCcc-EEEEEEeCeEEEEEEecCC-----------------------CCceEEEEecCCcEEEEcCCCe
Q 042226 100 APWGVVPPHVHPRAT-EILTVIEGSLEVGFVTSNP-----------------------ENRLITKVLQKGDVFVFPIGLV 155 (216)
Q Consensus 100 ~pG~~~ppH~Hp~a~-Ei~yVl~G~~~~~~~~~~~-----------------------~~~~~~~~L~~GDv~~~P~G~~ 155 (216)
++|+..+.|..+.++ -+..|++|+=+..+..+.. ..+.+..++++||++++|.|..
T Consensus 239 ~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGetlfIPsGWw 318 (447)
T 3kv4_A 239 VRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWI 318 (447)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCcEEecCCCCe
Confidence 445678999988554 4578999998887765431 0234678999999999999999
Q ss_pred EEEEECCCC
Q 042226 156 HFQRNVGHG 164 (216)
Q Consensus 156 H~~~N~g~~ 164 (216)
|+..|..+.
T Consensus 319 H~V~nleds 327 (447)
T 3kv4_A 319 HAVLTPVDC 327 (447)
T ss_dssp EEEEESSCE
T ss_pred EEEecCCCE
Confidence 999998553
No 159
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=94.32 E-value=0.12 Score=44.13 Aligned_cols=61 Identities=18% Similarity=0.095 Sum_probs=43.6
Q ss_pred EcCCccc-CCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEE
Q 042226 99 YAPWGVV-PPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISA 171 (216)
Q Consensus 99 l~pG~~~-ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~ 171 (216)
+.+|... ..-. .+-++++++|+..+.+. ++ ++.|++||++.||+|..|.+.-..+ .+++.+
T Consensus 214 ~G~Ges~~~~~~---~d~wiWqLEGss~Vt~~-----~q--~~~L~~~DsLLIpa~~~y~~~r~~g--sv~L~I 275 (286)
T 2qnk_A 214 YGQGSSEGLRQN---VDVWLWQLEGSSVVTMG-----GR--RLSLAPDDSLLVLAGTSYAWERTQG--SVALSV 275 (286)
T ss_dssp ECSEEEEECCCS---SCEEEEEEESCEEEEET-----TE--EEEECTTEEEEECTTCCEEEEECTT--CEEEEE
T ss_pred EcCCccccccCc---CcEEEEEEcCceEEEEC-----Ce--EEeccCCCEEEecCCCeEEEEecCC--eEEEEE
Confidence 7777432 2221 25689999999988773 33 7899999999999999999866433 344443
No 160
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=93.93 E-value=0.1 Score=46.37 Aligned_cols=64 Identities=13% Similarity=0.155 Sum_probs=49.3
Q ss_pred cCCcccCCccCCCccE-EEEEEeCeEEEEEEecCC-----------------------CCceEEEEecCCcEEEEcCCCe
Q 042226 100 APWGVVPPHVHPRATE-ILTVIEGSLEVGFVTSNP-----------------------ENRLITKVLQKGDVFVFPIGLV 155 (216)
Q Consensus 100 ~pG~~~ppH~Hp~a~E-i~yVl~G~~~~~~~~~~~-----------------------~~~~~~~~L~~GDv~~~P~G~~ 155 (216)
++|+..+.|..+.++- +..+++|+=+..+..+.. ..+.+..++++||++++|.|..
T Consensus 155 p~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtLfIPsGWw 234 (371)
T 3k3o_A 155 VRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWI 234 (371)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCceEEEEECCCcEEEeCCCCe
Confidence 4566789999986554 567999998887764320 0234688999999999999999
Q ss_pred EEEEECCC
Q 042226 156 HFQRNVGH 163 (216)
Q Consensus 156 H~~~N~g~ 163 (216)
|+..|..+
T Consensus 235 H~V~nled 242 (371)
T 3k3o_A 235 HAVLTPVD 242 (371)
T ss_dssp EEEEEEEE
T ss_pred EEEecCCC
Confidence 99999744
No 161
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=93.66 E-value=0.81 Score=39.06 Aligned_cols=80 Identities=18% Similarity=0.197 Sum_probs=52.0
Q ss_pred ceEEEEEEEcCCc---ccCCccCCCccEEEEEEe----CeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCC
Q 042226 91 GVSLARIDYAPWG---VVPPHVHPRATEILTVIE----GSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGH 163 (216)
Q Consensus 91 gvs~~~~~l~pG~---~~ppH~Hp~a~Ei~yVl~----G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~ 163 (216)
.+-+....+.||+ .-|||.|.+..|..|-.+ |.+...+ .+. ++.+...++-||++++|.+.+|.. .|.
T Consensus 179 qllmg~evltpgg~WSSyPpHkHDrr~EeyyYF~l~~~gfv~q~~-g~p--~Etrhi~V~n~daVlvP~wh~h~~--~G~ 253 (282)
T 1xru_A 179 QLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACVFHMM-GQP--QETRHIVMHNEQAVISPSWSIHSG--VGT 253 (282)
T ss_dssp SCEEEEEEECTTCCEESCSEEECTTEEEEEEEESCCTTCCEEEEE-EET--TEEEEEEECSSEEEEECTTCEEEE--EES
T ss_pred hEEEEEEEEeCCCCcCCCCCccCCCCceEEEEEEeCCCCEEEEEe-CCC--CCeeEEEEECCCEEEeCCCCCCCC--CCc
Confidence 3457777788886 359999997677665543 4443334 332 344456789999999997677774 466
Q ss_pred CcEEEEEEEeCC
Q 042226 164 GNAFSISALSSQ 175 (216)
Q Consensus 164 ~~a~~l~~~~s~ 175 (216)
+.-.++.+.-.+
T Consensus 254 ~~Y~ylwvMAG~ 265 (282)
T 1xru_A 254 KAYTFIWGMVGE 265 (282)
T ss_dssp SCCEEEEEEEES
T ss_pred cceEEEEEEEcC
Confidence 665555555433
No 162
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=93.40 E-value=0.4 Score=34.33 Aligned_cols=64 Identities=17% Similarity=0.084 Sum_probs=46.4
Q ss_pred EEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEE
Q 042226 98 DYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISA 171 (216)
Q Consensus 98 ~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~ 171 (216)
.+.||. .+..-.+.|++-|++|++++.+.+++ . .+++++||.|.+|++.--.++-. ++...++.
T Consensus 29 Vm~pGe---ytF~T~~~E~M~vvsG~~~V~lpg~~---e--w~~~~aGesF~Vpans~F~l~v~--~~~~YlC~ 92 (94)
T 2oyz_A 29 VMLPGE---YTFGTQAPERMTVVKGALVVKRVGEA---D--WTTYSSGESFDVEGNSSFELQVK--DATAYLCE 92 (94)
T ss_dssp EECSEE---EEEEESSCEEEEEEESEEEEEETTCS---S--CEEEETTCEEEECSSEEEEEEES--SCEEEEEE
T ss_pred EEeceE---EEEcCCCeEEEEEEEeEEEEEcCCCC---c--CEEECCCCEEEECCCCEEEEEEc--ccEeEEEE
Confidence 456664 23333468999999999999986542 2 68999999999999987766553 44555554
No 163
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=93.31 E-value=0.095 Score=46.98 Aligned_cols=64 Identities=14% Similarity=0.164 Sum_probs=49.1
Q ss_pred cCCcccCCccCCCccE-EEEEEeCeEEEEEEecCC-----------------------CCceEEEEecCCcEEEEcCCCe
Q 042226 100 APWGVVPPHVHPRATE-ILTVIEGSLEVGFVTSNP-----------------------ENRLITKVLQKGDVFVFPIGLV 155 (216)
Q Consensus 100 ~pG~~~ppH~Hp~a~E-i~yVl~G~~~~~~~~~~~-----------------------~~~~~~~~L~~GDv~~~P~G~~ 155 (216)
+.|+..+.|+.+.++- +..+++|+=+..+..+.. ..+.+..++++||++++|.|.+
T Consensus 183 p~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~~v~l~pGe~lfIPsGW~ 262 (397)
T 3kv9_A 183 VQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWI 262 (397)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceEEEEECCCCEEEeCCCCe
Confidence 4466789999986553 578999998887775420 0234678999999999999999
Q ss_pred EEEEECCC
Q 042226 156 HFQRNVGH 163 (216)
Q Consensus 156 H~~~N~g~ 163 (216)
|+..|..+
T Consensus 263 H~V~nled 270 (397)
T 3kv9_A 263 HAVLTSQD 270 (397)
T ss_dssp EEEEEEEE
T ss_pred EEccCCcC
Confidence 99999743
No 164
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=93.22 E-value=0.31 Score=39.47 Aligned_cols=88 Identities=18% Similarity=0.209 Sum_probs=56.7
Q ss_pred cCCCCCccCce-EEEEEEEcCCcccCCccCCCccEEEE----EEeC-eEEEEEEecCCCCceEEEEecCCcEEEEcCCCe
Q 042226 82 AQIPGLNTLGV-SLARIDYAPWGVVPPHVHPRATEILT----VIEG-SLEVGFVTSNPENRLITKVLQKGDVFVFPIGLV 155 (216)
Q Consensus 82 ~~~P~l~~~gv-s~~~~~l~pG~~~ppH~Hp~a~Ei~y----Vl~G-~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~ 155 (216)
+++|++..... ++....+.||+.++||..+....+-+ ++-. ...+.+. ++ ....++|++++|.-...
T Consensus 91 ~~ip~~~~~~~~~a~fs~L~pG~~I~pH~g~~n~~lR~HL~L~~p~~~~~i~V~-----~~--~~~w~eGe~~~fDds~~ 163 (197)
T 3rcq_A 91 EKFPETTGCRRGQIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKIRCA-----NE--TKTWEEGKVLIFDDSFE 163 (197)
T ss_dssp TTCHHHHTCTTCEEEEEEECTTEEEEEECCSCTTEEEEEEEEECCSSSEEEEET-----TE--EECCCBTCEEEECTTSC
T ss_pred HhCcccccCCcceEEEEEeCCCCCcCCeeCCCCCeEEEEEEEEeCCCCcEEEEC-----CE--EEEeeCCcEEEEcCCeE
Confidence 55665442221 45666799999999999985444321 2222 2334332 33 67899999999999999
Q ss_pred EEEEECCCCcEEEEEEEeCCCC
Q 042226 156 HFQRNVGHGNAFSISALSSQNP 177 (216)
Q Consensus 156 H~~~N~g~~~a~~l~~~~s~~p 177 (216)
|...|.++++-+.+ +++-..|
T Consensus 164 Hev~N~~d~~RvvL-~~D~~rP 184 (197)
T 3rcq_A 164 HEVWQDASSFRLIF-IVDVWHP 184 (197)
T ss_dssp EEEEECSSSCEEEE-EEEEECT
T ss_pred EEEEECCCCCEEEE-EEeeeCC
Confidence 99999988754443 4443333
No 165
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=92.74 E-value=0.21 Score=44.60 Aligned_cols=64 Identities=9% Similarity=0.163 Sum_probs=49.3
Q ss_pred cCCcccCCccCCCcc-EEEEEEeCeEEEEEEecCC-----------------------CCceEEEEecCCcEEEEcCCCe
Q 042226 100 APWGVVPPHVHPRAT-EILTVIEGSLEVGFVTSNP-----------------------ENRLITKVLQKGDVFVFPIGLV 155 (216)
Q Consensus 100 ~pG~~~ppH~Hp~a~-Ei~yVl~G~~~~~~~~~~~-----------------------~~~~~~~~L~~GDv~~~P~G~~ 155 (216)
+.|+..+.|..+.++ -+..+++|+=+..+..+.. ..+.+..++++||++++|.|.+
T Consensus 182 p~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtlfIPsGWw 261 (392)
T 3pua_A 182 VKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKCYKCIVKQGQTLFIPSGWI 261 (392)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccceEEEEECCCcEEeeCCCce
Confidence 456678999998554 4678999998887765431 0133678999999999999999
Q ss_pred EEEEECCC
Q 042226 156 HFQRNVGH 163 (216)
Q Consensus 156 H~~~N~g~ 163 (216)
|+..|..+
T Consensus 262 H~V~nled 269 (392)
T 3pua_A 262 YATLTPVD 269 (392)
T ss_dssp EEEEEEEE
T ss_pred EEEecCCC
Confidence 99999744
No 166
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=91.93 E-value=0.21 Score=46.28 Aligned_cols=64 Identities=13% Similarity=0.174 Sum_probs=49.0
Q ss_pred cCCcccCCccCCCcc-EEEEEEeCeEEEEEEecCC-----------------------CCceEEEEecCCcEEEEcCCCe
Q 042226 100 APWGVVPPHVHPRAT-EILTVIEGSLEVGFVTSNP-----------------------ENRLITKVLQKGDVFVFPIGLV 155 (216)
Q Consensus 100 ~pG~~~ppH~Hp~a~-Ei~yVl~G~~~~~~~~~~~-----------------------~~~~~~~~L~~GDv~~~P~G~~ 155 (216)
+.|+...+|..+.++ -+..|++|+=+..+..+.+ +.+.+..++++||++++|+|.+
T Consensus 304 ~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~w~~s~~~~~wfgd~l~~~~~~v~l~pGEtlfIPsGW~ 383 (528)
T 3pur_A 304 MAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVIKEGQTLLIPAGWI 383 (528)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSSCCSCCGGGGTTTCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhhhccCCchhhhhcccccccEEEEEECCCCEEEecCCce
Confidence 445678999988554 5678999998887775431 1233568999999999999999
Q ss_pred EEEEECCC
Q 042226 156 HFQRNVGH 163 (216)
Q Consensus 156 H~~~N~g~ 163 (216)
|+..|..+
T Consensus 384 HaV~tleD 391 (528)
T 3pur_A 384 HAVLTPVD 391 (528)
T ss_dssp EEEEEEEE
T ss_pred EEEecCCC
Confidence 99999743
No 167
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=91.79 E-value=0.84 Score=33.59 Aligned_cols=67 Identities=16% Similarity=0.194 Sum_probs=49.4
Q ss_pred EEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEEE
Q 042226 98 DYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISAL 172 (216)
Q Consensus 98 ~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~ 172 (216)
.+.||. .|.+..-.+.|++-|++|++++.+.++. . .+++++|+.|.+|++.--.++-. ++..+++.+
T Consensus 43 Vm~PGe-~~YtF~T~~~E~MevvsG~l~V~Lpg~~---e--W~~~~aGesF~VpanssF~lkv~--~~~~Y~C~y 109 (111)
T 3hqx_A 43 VILPTE-QPLTFETHVPERMEIISGECRVKIADST---E--SELFRAGQSFYVPGNSLFKIETD--EVLDYVCHL 109 (111)
T ss_dssp EECCCS-SCEEEECSSCEEEEEEESEEEEEETTCS---S--CEEEETTCEEEECTTCEEEEECS--SCEEEEEEE
T ss_pred EEeccc-cceEEcCCCcEEEEEEEeEEEEEcCCcc---c--CEEeCCCCEEEECCCCcEEEEEC--cceeEEEEc
Confidence 467762 2344455578999999999999986542 2 68999999999999988776543 556666654
No 168
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=91.68 E-value=0.96 Score=38.72 Aligned_cols=81 Identities=19% Similarity=0.230 Sum_probs=44.1
Q ss_pred ceEEEEEEEcCCcc---cCCccCCCccEEEEEEe----CeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCC
Q 042226 91 GVSLARIDYAPWGV---VPPHVHPRATEILTVIE----GSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGH 163 (216)
Q Consensus 91 gvs~~~~~l~pG~~---~ppH~Hp~a~Ei~yVl~----G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~ 163 (216)
.+-+....+.||+. -|||.|.+..|..|-.+ |.+ +.+.++- ++.+...++-||++++|+|-.|.. .|.
T Consensus 179 qllmg~evltpGg~WSSyPpHkHDrr~E~yyYF~l~p~~~v-~h~~g~p--dEtrh~~V~n~daVlvP~wgyHp~--~Gt 253 (289)
T 1ywk_A 179 QLQMGYTILEPGSAWNTMPCHTHERRMEAYVYFDMEEDTRI-FHMMGKP--DETKHLVMSNEQAAISPSWSIHSG--VGT 253 (289)
T ss_dssp SCEEEEEEECTTCCCCC--------CEEEEEEESCCTTCCE-EEEESST--TSCEEEEECTTEEEEECTTSCCCE--EES
T ss_pred eEEEEEEEEeCCCCcCCCCCccCCCCCeeEEEEEeCCCCeE-EEECCCC--CceEEEEEECCCEEEeCCCcccCC--CCC
Confidence 34577777888863 59999997677665433 322 2333332 344456889999999999988962 344
Q ss_pred CcEEEEEEEeCCC
Q 042226 164 GNAFSISALSSQN 176 (216)
Q Consensus 164 ~~a~~l~~~~s~~ 176 (216)
..-.++.+.-.+|
T Consensus 254 ~~Y~ylwvMAG~n 266 (289)
T 1ywk_A 254 SNYSFIWAMCGEN 266 (289)
T ss_dssp SCCEEEEEEECC-
T ss_pred cCeEEEEEEEcCC
Confidence 4444555554443
No 169
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=91.44 E-value=0.52 Score=38.40 Aligned_cols=79 Identities=15% Similarity=0.086 Sum_probs=47.3
Q ss_pred EEEEEEEcCCcccCCccCCCccE--EEEEE----eCeEEEEEEecCC-----------C-----CceEEEEecCCcEEEE
Q 042226 93 SLARIDYAPWGVVPPHVHPRATE--ILTVI----EGSLEVGFVTSNP-----------E-----NRLITKVLQKGDVFVF 150 (216)
Q Consensus 93 s~~~~~l~pG~~~ppH~Hp~a~E--i~yVl----~G~~~~~~~~~~~-----------~-----~~~~~~~L~~GDv~~~ 150 (216)
......+++|+...+|.|+++.- ++|+- .|++.+ .++.. + .......-++|++++|
T Consensus 104 ~~W~~~~~~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f--~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlF 181 (216)
T 2rg4_A 104 DIWINILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKL--EDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLW 181 (216)
T ss_dssp EEEEEEECTTCCEEEECCTTCSEEEEEEEECCSCSCCEEE--ECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEE
T ss_pred eEEEEEcCCCCcccCccCCCCeEEEEEEEECCCCCccEEE--eCCccccccccCcccccCcccCCCeeEecCCCCeEEEE
Confidence 35556689999999999985321 23332 234443 33210 0 1112445699999999
Q ss_pred cCCCeEEEEECCCCcEEEEEEEe
Q 042226 151 PIGLVHFQRNVGHGNAFSISALS 173 (216)
Q Consensus 151 P~G~~H~~~N~g~~~a~~l~~~~ 173 (216)
|+.+.|...-...+.-++-.+||
T Consensus 182 pS~l~H~V~p~~~~~~RiSIsFN 204 (216)
T 2rg4_A 182 ESWLRHEVPMNMAEEDRISVSFN 204 (216)
T ss_dssp ETTSCEEECCCCSSSCEEEEEEE
T ss_pred CCCCEEeccCCCCCCCEEEEEEE
Confidence 99999998554333334444554
No 170
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=91.05 E-value=1.3 Score=32.92 Aligned_cols=57 Identities=16% Similarity=0.109 Sum_probs=38.9
Q ss_pred ccCCccCCCc-cEEEEEEeCeEEEEEEecCCC-CceEEEEecCCcEEEEcCCCeEEEEE
Q 042226 104 VVPPHVHPRA-TEILTVIEGSLEVGFVTSNPE-NRLITKVLQKGDVFVFPIGLVHFQRN 160 (216)
Q Consensus 104 ~~ppH~Hp~a-~Ei~yVl~G~~~~~~~~~~~~-~~~~~~~L~~GDv~~~P~G~~H~~~N 160 (216)
...-|.-..+ ...+-|++|++++....++++ .-.....+.+|+..++|+...|.+.-
T Consensus 28 l~~~HnTK~GtWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~ 86 (119)
T 3dl3_A 28 LLTHHNTAVDVFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIEL 86 (119)
T ss_dssp HHSSBCCCTTEEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEE
T ss_pred HHhccCCCCcEEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEE
Confidence 3445544322 334789999999986543311 01135688999999999999999993
No 171
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=90.72 E-value=0.91 Score=41.09 Aligned_cols=76 Identities=13% Similarity=0.067 Sum_probs=47.6
Q ss_pred ceEEEEEEEc--CCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEE-EEecCCcEEEEcCCCeEEEEEC---CCC
Q 042226 91 GVSLARIDYA--PWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLIT-KVLQKGDVFVFPIGLVHFQRNV---GHG 164 (216)
Q Consensus 91 gvs~~~~~l~--pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~-~~L~~GDv~~~P~G~~H~~~N~---g~~ 164 (216)
.+++.++++. ++.....-.+. +..+++|++|++++...+ .+. . ..|++||++++|++..-.+.+. +.+
T Consensus 356 eF~v~~~~~~~~~~~~~~~~~~~-~~~illv~~G~g~i~~~~----~~~-~~~~l~~G~~~fvpa~~~~~i~g~~~~~~~ 429 (440)
T 1pmi_A 356 EFSVLQTIFDKSKGGKQVIEGLN-GPSIVIATNGKGTIQITG----DDS-TKQKIDTGYVFFVAPGSSIELTADSANQDQ 429 (440)
T ss_dssp SCEEEEEECCTTTCCEEEECCCS-SCEEEEEEESEEEEEETT----CGG-GCEEEETTCEEEECTTCCEEEEECSSCCSS
T ss_pred eEEEEEEEecCCCCceeEEecCC-CcEEEEEEeCeEEEEeCC----ccc-ceEEeccCCEEEEeCCCcEEEEEecccCCC
Confidence 3577888887 44221111223 678999999999987521 211 1 5899999999999954444554 144
Q ss_pred cEEEEEEE
Q 042226 165 NAFSISAL 172 (216)
Q Consensus 165 ~a~~l~~~ 172 (216)
.+.++.++
T Consensus 430 ~~~~~~a~ 437 (440)
T 1pmi_A 430 DFTTYRAF 437 (440)
T ss_dssp CCEEEEEE
T ss_pred cEEEEEEE
Confidence 55555544
No 172
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=88.25 E-value=8.1 Score=30.44 Aligned_cols=129 Identities=15% Similarity=0.150 Sum_probs=80.3
Q ss_pred CCC-CceEEEeeccC-------CCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCe-EEEEEEecCCCCceEEE
Q 042226 70 NPL-GSRVTPVTVAQ-------IPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGS-LEVGFVTSNPENRLITK 140 (216)
Q Consensus 70 ~~~-g~~~~~~~~~~-------~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~-~~~~~~~~~~~~~~~~~ 140 (216)
.+. |+..+....+. ..+-+ ...+..+.-+.+|....+|.- ++.|+.+-..|. +++.+..++ ++..+.
T Consensus 24 HPEEGG~yrEt~rs~~~v~~~~~~~~R-~~~TaIYfLL~~~~~S~~HRv-~sdEiW~~~~G~pL~l~~~~~d--G~~~~~ 99 (172)
T 3loi_A 24 HPASGGWFRETYRSDVQVEAEGFDGKR-SVLTMIYYLMQAGQPDPFHRV-KSDETFVHNLGGSMKIHMIHPD--GSYSCS 99 (172)
T ss_dssp CTTSSSEEEEEEECSCEECCTTSSSCE-ESCEEEEEEEETTCCEEEEEC-SSEEEEEEEEESCEEEEEECTT--SCEEEE
T ss_pred CCcCCCeEEEEEECcCcccCCCCCCCc-ccceEEEEEEcCCCCccCEEe-cCCEEEEEEcCCCEEEEEEcCC--CceEEE
Confidence 455 66666665542 11211 124566666888875555544 489999988886 678887765 565566
Q ss_pred Eec----CCc---EEEEcCCCeEEEEECCCCcEEEEEEEeCCCCceeEeehhhhcCCCCCCHHHHHHHcCCCHHHHHHHh
Q 042226 141 VLQ----KGD---VFVFPIGLVHFQRNVGHGNAFSISALSSQNPGVITIANAVFGSNPAIAADILAKAFQVDKSVVDQLQ 213 (216)
Q Consensus 141 ~L~----~GD---v~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~~~lf~~~p~~p~~vl~~af~~~~~~v~~l~ 213 (216)
.|. +|+ .++||+|....... | .-.+++.. -.||+..-. |.- .+.+-|.+.|.--++.|++|-
T Consensus 100 ~LG~d~~~Ge~~pQ~vVP~G~WqaA~~-~--~~~LVsct--VaPGF~f~d---fel---~~~~~L~~~~P~~~~~I~~lt 168 (172)
T 3loi_A 100 ILGNPLEHPEARHQVVVPRRVWFAQEV-D--GYCLASVL--VAPGFDFKD---FSL---GKREELIKEYPQHRDVIMRCT 168 (172)
T ss_dssp EESCTTTSTTCBSEEEECTTCEEEEEE-S--SEEEEEEE--EESCCCGGG---CEE---CCHHHHHHHCGGGHHHHHHTS
T ss_pred EeCCCcccCCcceEEEECCCEEEEEEe-C--CcEEEEEE--EcCCccchh---cEE---cCHHHHHHHCchHHHHHHHhc
Confidence 664 577 78999999988877 2 33444432 235543321 333 456666777777778888774
No 173
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=88.08 E-value=1.5 Score=37.85 Aligned_cols=56 Identities=29% Similarity=0.404 Sum_probs=40.1
Q ss_pred eEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEE
Q 042226 92 VSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHF 157 (216)
Q Consensus 92 vs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~ 157 (216)
+++.++++.++... ....+..++.|++|++++.. . ++ ...|++||.+++|++.-.+
T Consensus 251 F~~~~~~~~~~~~~---~~~~~~~il~v~~G~~~l~~--~---~~--~~~l~~G~~~~vpa~~~~~ 306 (319)
T 1qwr_A 251 FSVYKWDINGEAEM---AQDESFLICSVIEGSGLLKY--E---DK--TCPLKKGDHFILPAQMPDF 306 (319)
T ss_dssp CEEEEEEEEEEEEE---CCCSSCEEEEEEEEEEEEEE--T---TE--EEEEETTCEEEECTTCCCE
T ss_pred EEEEEEEECCceEE---ccCCccEEEEEEcCeEEEEE--C---CE--EEEEcCCcEEEEeCCCceE
Confidence 46777777654322 22246889999999999865 1 23 5689999999999987433
No 174
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=87.56 E-value=5 Score=33.19 Aligned_cols=70 Identities=7% Similarity=-0.039 Sum_probs=47.1
Q ss_pred CceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEE
Q 042226 90 LGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSI 169 (216)
Q Consensus 90 ~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 169 (216)
..+.+..+.+++|.....-..+.-.-++||++|++.+. + ..|++||.+++..+..-.+.+ .++++++
T Consensus 158 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~v~~G~v~v~-------g----~~l~~gd~~~~~~~~~l~l~a--~~~a~~L 224 (242)
T 1tq5_A 158 QDMELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTIN-------G----VKASTSDGLAIWDEQAISIHA--DSDSEVL 224 (242)
T ss_dssp SSCEEEEEEECTTCEEEECCCTTCEEEEEEEESEEEET-------T----EEEETTCEEEEESCSCEEEEE--SSSEEEE
T ss_pred CCCEEEEEEECCCCEEEeecCCCcEEEEEEccCcEEEC-------C----EEeCCCCEEEECCCCeEEEEe--CCCCEEE
Confidence 35678888999998653333343345799999999871 2 369999999998765444444 3456665
Q ss_pred EEE
Q 042226 170 SAL 172 (216)
Q Consensus 170 ~~~ 172 (216)
.+-
T Consensus 225 l~~ 227 (242)
T 1tq5_A 225 LFD 227 (242)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 175
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=87.39 E-value=0.65 Score=41.40 Aligned_cols=56 Identities=16% Similarity=0.096 Sum_probs=40.2
Q ss_pred ceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeE
Q 042226 91 GVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVH 156 (216)
Q Consensus 91 gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H 156 (216)
.+++.++++.++... ..+. +..++.|++|++++... ++ +..|++||++++|++...
T Consensus 323 ~F~v~~~~l~~~~~~--~~~~-~~~il~v~~G~~~l~~~-----~~--~~~l~~G~~~fvpa~~~~ 378 (394)
T 2wfp_A 323 DFAFSLHDLALQETS--IGQH-SAAILFCVEGEAVLRKD-----EQ--RLVLKPGESAFIGADESP 378 (394)
T ss_dssp SCEEEEEECCSSCEE--ECCS-SCEEEEEEEEEEEEEET-----TE--EEEECTTCEEEECGGGCC
T ss_pred EEEEEEEEEcCCeEE--ecCC-CcEEEEEEeceEEEEEC-----Ce--EEEEccCcEEEEeCCCce
Confidence 457788888755321 2334 67899999999987542 22 579999999999998533
No 176
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=86.74 E-value=1.1 Score=32.77 Aligned_cols=55 Identities=18% Similarity=0.134 Sum_probs=41.8
Q ss_pred EEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEE
Q 042226 98 DYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRN 160 (216)
Q Consensus 98 ~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N 160 (216)
.+.||. .+..-.+.|++-|++|++++.+.+++ . .+++++||.|.+|++.--.++-
T Consensus 42 Vm~PGe---Y~F~T~~~E~MevvsG~l~V~LpG~~---e--W~~~~aGesF~VpanssF~lkv 96 (106)
T 3eo6_A 42 LLHPGV---YTLSSEVAETIRVLSGMAYYHAEGAN---D--VQELHAGDSMVIPANQSYRLEV 96 (106)
T ss_dssp EECSEE---EEECCSSCEEEEEEEEEEEEECTTCS---S--CEEEETTCEEEECSSSCEEEEE
T ss_pred EEeeeE---EEecCCCcEEEEEEEeEEEEECCCCc---c--CEEECCCCEEEECCCCcEEEEE
Confidence 356663 33444578999999999999886542 2 6899999999999998766644
No 177
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=86.51 E-value=12 Score=30.66 Aligned_cols=132 Identities=16% Similarity=0.235 Sum_probs=79.5
Q ss_pred CCCCceEEEeeccCCC-----CCccCceEEEEEEEcCCcccCCccCC-CccEEEEEEeCe-EEEEEEecCCCC-------
Q 042226 70 NPLGSRVTPVTVAQIP-----GLNTLGVSLARIDYAPWGVVPPHVHP-RATEILTVIEGS-LEVGFVTSNPEN------- 135 (216)
Q Consensus 70 ~~~g~~~~~~~~~~~P-----~l~~~gvs~~~~~l~pG~~~ppH~Hp-~a~Ei~yVl~G~-~~~~~~~~~~~~------- 135 (216)
.+.|+..+....+... +-.....+..+.-+.+|.. -|||. ++.|+.+...|. +++.+..++ +
T Consensus 33 HPEGG~yrEt~Rs~~~v~~~~~~~R~~~TaIYfLL~~g~~--S~~HRv~sdEiW~~h~G~pL~l~li~~d--G~~~~~~~ 108 (225)
T 3m3i_A 33 HPEGGYYSEVVRSAHKVDNEEGNRRHAYTTIYFLCTPESP--SHLHRLCSDETWMYHAGDPLQLHVILKD--PQDEDRIA 108 (225)
T ss_dssp CTTSSEEEEEEECSSEEECTTSCEEESCEEEEEEECSSSC--EEEEECSSEEEEEEEEESCEEEEEEESS--STTTTC--
T ss_pred CCCCceEEEEEECCCcccCCCCCCcccceeEEEEecCCCC--cccEEecCCEEEEEECCCCEEEEEEcCC--Cccccccc
Confidence 4567777666654331 1111123566666788875 45553 589999988888 577777654 3
Q ss_pred ---------------------ceEEEEec----CCc--EEEEcCCCeEEEEECCCC-----cEEEEEEEeCCCCceeEee
Q 042226 136 ---------------------RLITKVLQ----KGD--VFVFPIGLVHFQRNVGHG-----NAFSISALSSQNPGVITIA 183 (216)
Q Consensus 136 ---------------------~~~~~~L~----~GD--v~~~P~G~~H~~~N~g~~-----~a~~l~~~~s~~pg~~~~~ 183 (216)
+..+..|. +|+ .++||+|.+......+++ .-.+++..- .||+..-.
T Consensus 109 ~~~~~~P~~~~~~~~~~~~~~~~~~~~LG~d~~~Ge~pQ~vVP~G~WqaA~~~~~~~~~~~~~sLVsCtV--aPGFdF~D 186 (225)
T 3m3i_A 109 AQPPAAPQAETDTADARPKYQVYRRVLVGARVERGELLQYTVPGGAIFGSSVAADGADGQAGYSLVSCIV--SPGFDYRD 186 (225)
T ss_dssp ----------------CCSSCEEEEEEESSCGGGTCBSEEEECTTCEEEEECCSSSTTCSSSCEEEEEEE--ESCCCGGG
T ss_pred ccccccccccccccccccccCceEEEEeCCCccCCceeEEEeCCCEEEEEEECCCCcCcCCCeEEEEEEE--cCCccchh
Confidence 34456664 465 579999999988876643 344444332 34543321
Q ss_pred hhhhcCCCCCCHHHHHHHcCCCHHHHHHHh
Q 042226 184 NAVFGSNPAIAADILAKAFQVDKSVVDQLQ 213 (216)
Q Consensus 184 ~~lf~~~p~~p~~vl~~af~~~~~~v~~l~ 213 (216)
|.- .+.+-|.+-|.--++.|++|-
T Consensus 187 ---Fel---~~~~~L~~~~P~~~~~I~~lt 210 (225)
T 3m3i_A 187 ---FEI---FTQAQLMELYPQHEAVIKQMA 210 (225)
T ss_dssp ---CEE---CBHHHHHHHCGGGHHHHHHHS
T ss_pred ---cEe---cCHHHHHHHCchHHHHHHHhc
Confidence 333 456666667766677777763
No 178
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=85.27 E-value=2.4 Score=30.52 Aligned_cols=53 Identities=11% Similarity=0.219 Sum_probs=36.5
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVF 148 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 148 (216)
+....+++|...-..-.+ ...+.+|++|++.+...++++ .+.....+.+||++
T Consensus 28 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~g~~~ 80 (149)
T 2pqq_A 28 MSEVTLARGDTLFHEGDP-GDRLYVVTEGKVKLHRTSPDG-RENMLAVVGPSELI 80 (149)
T ss_dssp CEEEEECTTCEEECTTSE-ECEEEEEEESCEEEEEECTTS-SEEEEEEECTTCEE
T ss_pred ceEEEeCCCCEEECCCCC-CCeEEEEEecEEEEEEECCCC-cEEEEEEcCCcCEe
Confidence 346678888754322222 577999999999998766542 34456788999987
No 179
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=84.86 E-value=3.8 Score=35.00 Aligned_cols=57 Identities=19% Similarity=0.185 Sum_probs=39.9
Q ss_pred ceEEEEEEEcCCcccCCccCCCcc-EEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEE
Q 042226 91 GVSLARIDYAPWGVVPPHVHPRAT-EILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQR 159 (216)
Q Consensus 91 gvs~~~~~l~pG~~~ppH~Hp~a~-Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~ 159 (216)
.+++.++++.+.... .. .+. .++.|++| +++.. + ++ ...+++||++++|++...+..
T Consensus 229 ~F~v~~~~~~~~~~~---~~-~~~~~il~v~~G-~~i~~-~----~~--~~~l~~G~~~~ipa~~~~~~i 286 (300)
T 1zx5_A 229 NFGLEVVDVTGTAEI---KT-GGVMNILYAAEG-YFILR-G----KE--TADLHRGYSCLVPASTDSFTV 286 (300)
T ss_dssp SEEEEEEEEEEEEEE---EC-CSBCEEEEEEES-CEEEE-S----SS--EEEECTTCEEEECTTCCEEEE
T ss_pred eEEEEEEEECCceEE---ec-CCceEEEEEccc-EEEEe-C----Ce--EEEEccceEEEEeCCCceEEE
Confidence 356777777643222 23 467 89999999 88765 2 22 568999999999998855443
No 180
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=83.81 E-value=7.6 Score=32.40 Aligned_cols=72 Identities=15% Similarity=-0.006 Sum_probs=46.9
Q ss_pred CceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEE
Q 042226 90 LGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSI 169 (216)
Q Consensus 90 ~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 169 (216)
..+.+..+.+++|........+.. -++||++|++.+. +.+ + -...|++||.+++-.+..-.+.. .++++++
T Consensus 180 ~~~~~~~~~L~~g~~~~~~~~~~~-~~l~v~~G~v~v~--g~~--~--~~~~l~~gd~~~l~~~~~l~l~a--~~~a~~L 250 (256)
T 2vec_A 180 QQVWLHHIVLDKGESANFQLHGPR-AYLQSIHGKFHAL--THH--E--EKAALTCGDGAFIRDEANITLVA--DSPLRAL 250 (256)
T ss_dssp SSCEEEEEEECTTCEEEEECSSSE-EEEEEEESCEEEE--ETT--E--EEEEECTTCEEEEESCSEEEEEE--SSSEEEE
T ss_pred CCcEEEEEEECCCCEEEEecCCCe-EEEEEEECEEEEC--Ccc--c--cceEECCCCEEEECCCCeEEEEe--CCCCEEE
Confidence 356788889999986544443433 6899999999874 211 1 13579999999997665434443 2455554
Q ss_pred E
Q 042226 170 S 170 (216)
Q Consensus 170 ~ 170 (216)
.
T Consensus 251 L 251 (256)
T 2vec_A 251 L 251 (256)
T ss_dssp E
T ss_pred E
Confidence 3
No 181
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=83.53 E-value=2.4 Score=30.24 Aligned_cols=54 Identities=13% Similarity=0.268 Sum_probs=32.8
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceE---EEEecCCcEEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLI---TKVLQKGDVFV 149 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~---~~~L~~GDv~~ 149 (216)
+....+++|...-.- ......+.+|++|++.+...++++ ++.. ...+.+||++=
T Consensus 29 ~~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~~~~G~~fG 85 (142)
T 3mdp_A 29 SEEKSFPTGSVIFKE-NSKADNLMLLLEGGVELFYSNGGA-GSAANSTVCSVVPGAIFG 85 (142)
T ss_dssp EEEEEECTTCEEECT-TSBCCEEEEEEESCEEEECC----------CEEEEECTTCEEC
T ss_pred hcEEecCCCCEEEeC-CCCCCcEEEEEeCEEEEEEECCCC-CceEeeeEEEecCCCEec
Confidence 455667888654222 223678999999999997655431 2333 56789999874
No 182
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=83.46 E-value=1.1 Score=39.97 Aligned_cols=41 Identities=24% Similarity=0.298 Sum_probs=31.0
Q ss_pred ceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEEEeCCC
Q 042226 136 RLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISALSSQN 176 (216)
Q Consensus 136 ~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~ 176 (216)
+.++..-++||.++||+|.+|...|..+.-.+..-.++.++
T Consensus 291 ~~~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~spe~ 331 (392)
T 2ypd_A 291 RTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEH 331 (392)
T ss_dssp CCEEEEEETTCEEEECTTCEEEEEESSEEEEEEEEECCGGG
T ss_pred eeEEEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcChhh
Confidence 34677889999999999999999999865444444554444
No 183
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=82.94 E-value=10 Score=32.13 Aligned_cols=79 Identities=10% Similarity=0.058 Sum_probs=51.0
Q ss_pred cCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEE
Q 042226 89 TLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFS 168 (216)
Q Consensus 89 ~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~ 168 (216)
...+.+..+.+++|........+.-.-++||++|++.+. +. .. ...+.++.++++..|..-.+.+.+.+++++
T Consensus 166 ~~~~~~~~~~l~~g~~~~~~l~~~~~~~lyv~~G~v~v~--g~---~~--~~~~~~~~~~~l~~gd~~~i~~~a~~~a~~ 238 (290)
T 1j1l_A 166 RTPTLYLDFKLDPGAKHSQPIPKGWTSFIYTISGDVYIG--PD---DA--QQKIEPHHTAVLGEGDSVQVENKDPKRSHF 238 (290)
T ss_dssp SSCEEEEEEEECTTCEEEEECCTTCEEEEEEEESCEEES--CT---TS--CEEECTTEEEEECSCSEEEEECCSSSCEEE
T ss_pred cCCcEEEEEEECCCCEEEeecCCCCEEEEEEEeCeEEEC--Cc---cc--ceeccCceEEEecCCCEEEEEEcCCCCcEE
Confidence 345778889999998763333332356799999999872 11 10 145777777777777665555545667777
Q ss_pred EEEEeC
Q 042226 169 ISALSS 174 (216)
Q Consensus 169 l~~~~s 174 (216)
+.+-..
T Consensus 239 LLl~G~ 244 (290)
T 1j1l_A 239 VLIAGE 244 (290)
T ss_dssp EEEEEC
T ss_pred EEEEcc
Confidence 765543
No 184
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=81.49 E-value=4.8 Score=30.53 Aligned_cols=53 Identities=9% Similarity=-0.045 Sum_probs=36.6
Q ss_pred EEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEE
Q 042226 95 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFV 149 (216)
Q Consensus 95 ~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~ 149 (216)
....+++|...-.- ......+.+|++|.+++...++++ .+.....+.+||++-
T Consensus 31 ~~~~~~~g~~l~~~-G~~~~~~y~i~~G~v~~~~~~~~G-~e~~~~~~~~g~~~g 83 (194)
T 3dn7_A 31 QLKKVRKKETLLKT-GEICRINYFVVKGCLRLFFIDEKG-IEQTTQFAIENWWLS 83 (194)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEESEEEEEEECTTS-CEEEEEEEETTCEEC
T ss_pred EEEEEcCCCEEECC-CCeeeEEEEeecCeEEEEEECCCC-CEEEEEEccCCcEEe
Confidence 45667887654222 222578999999999998876552 444566789999985
No 185
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=81.21 E-value=7.7 Score=32.65 Aligned_cols=73 Identities=14% Similarity=0.075 Sum_probs=48.1
Q ss_pred CceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcC-C----CeEEEEECCCC
Q 042226 90 LGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPI-G----LVHFQRNVGHG 164 (216)
Q Consensus 90 ~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~-G----~~H~~~N~g~~ 164 (216)
..+.+..+.+++|........+.-.-++||++|++.+. +. ...+++||.+++.. + ..-.+.+. +
T Consensus 165 ~~~~~~~~~L~~g~~~~~~~~~~~~~~lyv~~G~v~v~-------g~--~~~l~~~d~~~~~~~~~~~~~~l~l~a~--~ 233 (277)
T 2p17_A 165 VPVTMVEMIVEPGTTVVQDLPGHYNGFLYILEGSGVFG-------AD--NIEGKAGQALFFSRHNRGEETELNVTAR--E 233 (277)
T ss_dssp SCEEEEEEEECTTCEEEEEEETTCEEEEEEEESEEEET-------TT--TEEEETTEEEEECCCCTTCEEEEEEEES--S
T ss_pred CCCEEEEEEECCCCEEEeccCCCCEEEEEEEeCeEEEC-------CC--ceEeCCCcEEEEcCCCCCccceEEEEeC--C
Confidence 46788889999998764443332346899999998772 21 24799999999986 5 33334443 3
Q ss_pred cEEEEEEEe
Q 042226 165 NAFSISALS 173 (216)
Q Consensus 165 ~a~~l~~~~ 173 (216)
+++++.+-.
T Consensus 234 ~a~~Ll~~G 242 (277)
T 2p17_A 234 KLRLLLYAG 242 (277)
T ss_dssp SEEEEEEEE
T ss_pred CcEEEEEec
Confidence 566665443
No 186
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=81.16 E-value=5 Score=30.69 Aligned_cols=53 Identities=21% Similarity=0.323 Sum_probs=36.3
Q ss_pred EEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEE
Q 042226 95 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFV 149 (216)
Q Consensus 95 ~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~ 149 (216)
....+++|...-.- ......+++|++|.+.+...++++ .+.....+.+||++-
T Consensus 14 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~G-~~~~~~~~~~g~~~G 66 (207)
T 2oz6_A 14 HRRRYTAKSTIIYA-GDRCETLFFIIKGSVTILIEDDDG-REMIIGYLNSGDFFG 66 (207)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEESEEEEEEECTTS-CEEEEEEEETTCEES
T ss_pred ceEEECCCCEEEcC-CCCCCeEEEEEeCEEEEEEECCCC-CEEEEEEcCCCCCcc
Confidence 34567787654222 222578999999999998776542 444567889999884
No 187
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=80.75 E-value=4.7 Score=31.04 Aligned_cols=53 Identities=13% Similarity=0.068 Sum_probs=36.9
Q ss_pred EEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEE
Q 042226 95 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFV 149 (216)
Q Consensus 95 ~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~ 149 (216)
....+++|...-..-.+ ...+++|++|.+.+...++++ .+.....+.+||++-
T Consensus 23 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~g~~~G 75 (216)
T 4ev0_A 23 QRRLYPQGKPIFYQGDL-GQALYLVASGKVRLFRTHLGG-QERTLALLGPGELFG 75 (216)
T ss_dssp EEEEECTTCEEECTTCB-CCEEEEEEESCEEEEEECSSS-CEEEEEEECTTCEEC
T ss_pred eEEEeCCCCEEEeCCCC-CCEEEEEEeCEEEEEEECCCC-CEEEEEEecCCCEEe
Confidence 45567888654332233 578999999999998775542 344567889999873
No 188
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=80.47 E-value=1.2 Score=38.09 Aligned_cols=46 Identities=26% Similarity=0.254 Sum_probs=34.0
Q ss_pred ccEEEEEEe-CeEEEEEEecCC---------CCc------eEEEEecCCcEEEEcCCCeEEE
Q 042226 113 ATEILTVIE-GSLEVGFVTSNP---------ENR------LITKVLQKGDVFVFPIGLVHFQ 158 (216)
Q Consensus 113 a~Ei~yVl~-G~~~~~~~~~~~---------~~~------~~~~~L~~GDv~~~P~G~~H~~ 158 (216)
-+|..|+++ .++.+|+..... +++ +....+++||.+++|+|.+|..
T Consensus 117 KpE~~y~L~~~~~~~Gf~~~~~~~~~~~~l~~~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~ 178 (300)
T 1zx5_A 117 VESAWLVFNKGKAYAGFKEDVKIEELEEKLKEEDFDFKTLLNTFETTPYDTFVIRPGIPHAG 178 (300)
T ss_dssp CCEEEEECSSCEEEEEESSCCCHHHHHHHHTSSSCCGGGGEEEEECCTTCEEEECTTCCEEE
T ss_pred CcEEEEEcccHHHhhCCCCCCCHHHHHHHHHhCchhHHHHhceeECCCCCEEEcCCCCceEc
Confidence 379999998 566677643210 123 4577899999999999999997
No 189
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=80.17 E-value=5.3 Score=31.39 Aligned_cols=52 Identities=19% Similarity=0.243 Sum_probs=36.5
Q ss_pred EEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEE
Q 042226 95 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVF 148 (216)
Q Consensus 95 ~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 148 (216)
....+++|...-.--.+ ...+++|++|.+.+...++++ .+.....+.+||++
T Consensus 35 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G-~~~~~~~~~~G~~~ 86 (237)
T 3fx3_A 35 VWRSYDRGETLFLQEEK-AQAIHVVIDGWVKLFRMTPTG-SEAVVSVFTRGESF 86 (237)
T ss_dssp EEEEECTTCEEECTTSC-CCEEEEEEESEEEEEEECTTS-CEEEEEEEETTEEE
T ss_pred EEEEECCCCEEEcCCCc-cceEEEEEeeEEEEEEECCCC-CEEEEEEeCCCCEe
Confidence 45667888654322233 578999999999998876542 34456788999988
No 190
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=79.80 E-value=2.2 Score=30.90 Aligned_cols=53 Identities=17% Similarity=0.201 Sum_probs=34.1
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVF 148 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 148 (216)
+....+++|...-.--.+ ...+.+|++|.+.+...++++ .+.....+.+||++
T Consensus 35 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~G~~~ 87 (154)
T 2z69_A 35 SDLVNLDKGAYVFRQGEP-AHAFYYLISGCVKIYRLTPEG-QEKILEVTNERNTF 87 (154)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEESCEEEECCCC------CCEEECTTEEE
T ss_pred CcEEEecCCCEEecCCCc-cceEEEEEeCEEEEEEECCCC-CEEEEEEccCCCee
Confidence 455668888754333233 578999999999997654431 33345688999987
No 191
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=79.79 E-value=6 Score=30.29 Aligned_cols=53 Identities=17% Similarity=0.230 Sum_probs=36.5
Q ss_pred EEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEE
Q 042226 95 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFV 149 (216)
Q Consensus 95 ~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~ 149 (216)
....+++|...-..-.+ ...+++|++|.+.+...++++ .+.....+.+||++-
T Consensus 20 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~g~~~G 72 (210)
T 3ryp_A 20 HIHKYPSKSTLIHQGEK-AETLYYIVKGSVAVLIKDEEG-KEMILSYLNQGDFIG 72 (210)
T ss_dssp EEEEECTTCEEECTTSB-CCEEEEEEESEEEEEEECTTC-CEEEEEEEETTCEES
T ss_pred EEEEeCCCCEEECCCCC-CCeEEEEEeCEEEEEEECCCC-CEEEEEEcCCCCEee
Confidence 44567787654322223 578999999999998776542 344567789999984
No 192
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=79.54 E-value=6 Score=29.11 Aligned_cols=52 Identities=6% Similarity=-0.013 Sum_probs=34.9
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVF 148 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 148 (216)
+....+.+|..+--- ...+..+++|++|++.+.. ..+ +.......+.+||++
T Consensus 61 ~~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~-~~~-g~~~~~~~~~~G~~f 112 (161)
T 3idb_B 61 MFEKLVKEGEHVIDQ-GDDGDNFYVIDRGTFDIYV-KCD-GVGRCVGNYDNRGSF 112 (161)
T ss_dssp CEEEEECTTCEEECT-TSCCCEEEEEEESEEEEEE-EET-TEEEEEEEEESCCEE
T ss_pred cceeEeCCCCEEEeC-CCCCcEEEEEEeCEEEEEE-cCC-CCeEEEEEcCCCCEe
Confidence 345677888654322 3336789999999999987 433 133445678999966
No 193
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=79.52 E-value=5.7 Score=30.91 Aligned_cols=53 Identities=21% Similarity=0.219 Sum_probs=37.1
Q ss_pred EEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEE
Q 042226 95 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFV 149 (216)
Q Consensus 95 ~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~ 149 (216)
....+++|...-..-.+ ...+++|++|.+.+...++++ .+.....+.+||++-
T Consensus 35 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~G-~~~~~~~~~~g~~~G 87 (230)
T 3iwz_A 35 HRRRYPTRTDVFRPGDP-AGTLYYVISGSVSIIAEEDDD-RELVLGYFGSGEFVG 87 (230)
T ss_dssp EEEEECTTCEEECTTSB-CCEEEEEEESCEEEEEECTTS-CEEEEEEECTTCEES
T ss_pred eEEEeCCCCEEECCCCC-CCeEEEEEeeEEEEEEECCCC-CEEEEEEecCCCEEE
Confidence 45667888654322223 578999999999998776542 444567889999984
No 194
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=79.24 E-value=6.4 Score=30.66 Aligned_cols=53 Identities=15% Similarity=0.322 Sum_probs=36.3
Q ss_pred EEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEE
Q 042226 95 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFV 149 (216)
Q Consensus 95 ~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~ 149 (216)
....+++|...-.--.+ ...+++|++|.+.+...++++ .+.....+.+||++-
T Consensus 30 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~G~~~G 82 (227)
T 3d0s_A 30 QPVDFPRGHTVFAEGEP-GDRLYIIISGKVKIGRRAPDG-RENLLTIMGPSDMFG 82 (227)
T ss_dssp CEEEECTTCEEECTTCC-CCEEEEEEESCEEEEEECTTS-CEEEEEEECTTCEES
T ss_pred eEEEeCCCCEEEcCCCc-CCEEEEEEeeEEEEEEECCCC-cEEEEEEecCCCEEe
Confidence 35567887654322223 578999999999998776542 344567889999873
No 195
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=78.94 E-value=1.5 Score=37.90 Aligned_cols=46 Identities=22% Similarity=0.351 Sum_probs=31.1
Q ss_pred ccEEEEEEeC----eEEEEEEecCC--------CCc----eEEEEecCCcEEEEcCCCeEEE
Q 042226 113 ATEILTVIEG----SLEVGFVTSNP--------ENR----LITKVLQKGDVFVFPIGLVHFQ 158 (216)
Q Consensus 113 a~Ei~yVl~G----~~~~~~~~~~~--------~~~----~~~~~L~~GDv~~~P~G~~H~~ 158 (216)
-+|..|+++. ++.++...... ++. +....+++||.+++|+|.+|..
T Consensus 117 KpE~~y~L~~~~~~~~~~G~~~~~~e~l~~~i~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~ 178 (319)
T 1qwr_A 117 KTECWYIIDCKENAEIIYGHTARSKTELVTMINSGDWEGLLRRIKIKPGDFYYVPSGTLHAL 178 (319)
T ss_dssp CCEEEEEEEECTTCEEEEEECCSSHHHHHHHHHTTCHHHHEEEEECCTTCEEEECTTCCEEE
T ss_pred CCEEEEEccCCCchhheeCCCCCCHHHHHHHHHcCCHHHhceEEEcCCCCEEEcCCCCceEe
Confidence 4899999985 34444211100 000 1467999999999999999997
No 196
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=78.63 E-value=5.6 Score=31.10 Aligned_cols=54 Identities=13% Similarity=0.110 Sum_probs=37.3
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFV 149 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~ 149 (216)
+....+++|...-.--.+ ...+++|++|.+.+...++++ .+.....+.+||++-
T Consensus 29 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~g~~~G 82 (231)
T 3e97_A 29 VTERNFQPDELVVEQDAE-GEALHLVTTGVVRVSRVSLGG-RERVLGDIYAPGVVG 82 (231)
T ss_dssp EEEEEECTTCBCCCTTCT-TTCEEEECSSEEEEEEECC---CEEEEEEEESSEEES
T ss_pred cEEEEECCCCEEEeCCCC-CCeEEEEEecEEEEEEECCCC-ceEEEEecCCCCEEe
Confidence 456678888765333233 678999999999998766542 344567889999873
No 197
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=78.15 E-value=5.7 Score=30.40 Aligned_cols=53 Identities=11% Similarity=0.070 Sum_probs=36.7
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVF 148 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 148 (216)
+....+++|...-.-=-+ ...+.+|++|++.+...++++ .+.....+.+||++
T Consensus 62 ~~~~~~~~ge~i~~~G~~-~~~ly~I~~G~v~v~~~~~~g-~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 62 MQCYAAPRDCQLLTEGDP-GDYLLLILTGEVNVIKDIPNK-GIQTIAKVGAGAII 114 (187)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEEEEEEEEEEETTT-EEEEEEEEETTCEE
T ss_pred cEEEEeCCCCEEEcCCCC-CCeEEEEEeCEEEEEEECCCC-CeEEEEEccCCCee
Confidence 455668888654322223 678999999999998876542 33456688999987
No 198
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=77.46 E-value=5 Score=31.68 Aligned_cols=53 Identities=9% Similarity=0.108 Sum_probs=36.9
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVF 148 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 148 (216)
.....+++|...-.--.+ ...+++|++|.+.+...++++ .+.....+.+||++
T Consensus 43 ~~~~~~~~ge~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G-~~~~l~~~~~G~~f 95 (232)
T 1zyb_A 43 LHFIKHKAGETIIKSGNP-CTQLCFLLKGEISIVTNAKEN-IYTVIEQIEAPYLI 95 (232)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEESEEEEEEECGGG-SCEEEEEEESSEEE
T ss_pred cEEEEECCCCEEECCCCc-ccEEEEEEeeEEEEEEECCCC-CEEEEEEccCCCee
Confidence 456678888754332233 578999999999998765542 34456788999987
No 199
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=77.21 E-value=5.5 Score=30.40 Aligned_cols=50 Identities=16% Similarity=0.148 Sum_probs=32.6
Q ss_pred EEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEE
Q 042226 98 DYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFV 149 (216)
Q Consensus 98 ~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~ 149 (216)
.+++|...-.--.+ ...+++|++|.+.+...++++ .+.....+.+||++=
T Consensus 3 ~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~G~~~G 52 (195)
T 3b02_A 3 RFARKETIYLRGEE-ARTLYRLEEGLVRVVELLPDG-RLITLRHVLPGDYFG 52 (195)
T ss_dssp EECTTCEEECTTSB-CCCEEEEEESCEEEEEECTTS-CEEEEEEECTTCEEC
T ss_pred EcCCCCEEECCCCC-CCeEEEEEeCEEEEEEECCCC-CEEEEEEecCCCEec
Confidence 35566543221122 567899999999998766542 344567889999884
No 200
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=77.20 E-value=4.7 Score=31.57 Aligned_cols=53 Identities=11% Similarity=0.156 Sum_probs=34.4
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVF 148 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 148 (216)
.....+++|...-.--.+ ...+++|++|.+.+...++++ .+.....+.+||++
T Consensus 33 ~~~~~~~~g~~i~~~g~~-~~~~y~v~~G~v~~~~~~~~g-~~~~~~~~~~G~~~ 85 (232)
T 2gau_A 33 IQPFPCKKASTVFSEGDI-PNNLFYLYEGKIKILREGVYG-RFHISRIVKPGQFF 85 (232)
T ss_dssp CEEEEECTTCEEECTTCC-CCEEEEEEESCEEEEC------CCCEEEEECTTCEE
T ss_pred CeEEEECCCCEEEeCCCC-CCeEEEEEeCEEEEEEECCCC-CEEEEEEeCCCCEe
Confidence 455678888754322223 577999999999997655432 34456789999987
No 201
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=76.33 E-value=7.5 Score=30.88 Aligned_cols=55 Identities=13% Similarity=0.187 Sum_probs=38.5
Q ss_pred EEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEE
Q 042226 93 SLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFV 149 (216)
Q Consensus 93 s~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~ 149 (216)
.+....+++|...-.---+ ...+++|++|.+.+...++++ .+.....+.+||++-
T Consensus 42 ~~~~~~~~~ge~i~~~G~~-~~~ly~v~~G~v~~~~~~~~G-~~~~l~~~~~g~~~G 96 (243)
T 3la7_A 42 PPVVETFERNKTIFFPGDP-AERVYFLLKGAVKLSRVYEAG-EEITVALLRENSVFG 96 (243)
T ss_dssp CCEEEEECTTCEEECTTSB-CCEEEEEEESCEEEEEECTTC-CEEEEEEECTTCEES
T ss_pred hheeEEECCCCEEEcCCCC-CceEEEEEeCEEEEEEECCCC-CEEEEEEecCCCEEc
Confidence 3446678888765332223 578999999999998876652 444567889999873
No 202
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=76.02 E-value=8.1 Score=31.14 Aligned_cols=54 Identities=17% Similarity=0.216 Sum_probs=37.7
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFV 149 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~ 149 (216)
+....+++|...-.---+ ...+++|++|.+.+...++++ .+.....+.+||++-
T Consensus 69 ~~~~~~~~ge~i~~~G~~-~~~~y~I~~G~v~~~~~~~~G-~e~~~~~~~~G~~~G 122 (260)
T 3kcc_A 69 CHIHKYPSKSTLIHQGEK-AETLYYIVKGSVAVLIKDEEG-KEMILSYLNQGDFIG 122 (260)
T ss_dssp SEEEEECTTCEEECTTCB-CCEEEEEEECEEEEEEECTTC-CEEEEEEEETTCEES
T ss_pred CEEEEECCCCEEECCCCc-CCeEEEEEeCEEEEEEECCCC-CEEEEEEcCCCCEEe
Confidence 355678888754322223 578999999999998776542 444567889999884
No 203
>1xsq_A Ureidoglycolate hydrolase; northeast structural genomics consortium, NESG, structural genomics, protein structure initiative, PSI, ET81, X-RAY; 1.60A {Escherichia coli} SCOP: b.82.1.14 PDB: 1xsr_A 1yqc_A
Probab=76.02 E-value=5.8 Score=31.07 Aligned_cols=69 Identities=12% Similarity=0.044 Sum_probs=49.9
Q ss_pred ccCCccCCCccEEEEEEeCeEEEEEEecCCC----CceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEEE
Q 042226 104 VVPPHVHPRATEILTVIEGSLEVGFVTSNPE----NRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISAL 172 (216)
Q Consensus 104 ~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~----~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~ 172 (216)
+..+=.||.++|.+.-+.|...+-++.+.++ ++++.+....|+.+.+-+|++|...-.-+++..++.+-
T Consensus 68 v~~lERHp~~sQafiPl~~~~~lVvVA~~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~~~~F~vvd 140 (168)
T 1xsq_A 68 IHELERHPLGTQAFIPMKGEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTID 140 (168)
T ss_dssp EEEEEECTTBCEEEEESBCCCCEEEEEECSSSCEEEEEEEEECCSSCEEEECTTCEECCCCBSSSCEEEEEEE
T ss_pred eeEEeeCCCCceEEEECCCCEEEEEEeCCCCCCChhheEEEEecCCeEEEeCCCceecccccCCCcceEEEEe
Confidence 3445678989999999999876555444311 34678899999999999999999654445566676543
No 204
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=75.65 E-value=6.2 Score=30.62 Aligned_cols=53 Identities=19% Similarity=0.291 Sum_probs=36.9
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVF 148 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 148 (216)
+....+++|...-..-.+ ...+++|++|.+.+...++++ .+.....+.+||++
T Consensus 22 ~~~~~~~~g~~i~~~G~~-~~~~y~v~~G~v~~~~~~~~G-~~~~~~~~~~G~~~ 74 (213)
T 1o5l_A 22 GKVIVFRKGEIVKHQDDP-IEDVLILLEGTLKTEHVSENG-KTLEIDEIKPVQII 74 (213)
T ss_dssp SEEEEECTTCEEECTTCB-CCEEEEEEESCEEEEEECTTS-CEEEEEEECSSEES
T ss_pred cEEEEECCCCEEEcCCCc-cceEEEEEeeEEEEEEECCCC-CEEEEEEecCCCEe
Confidence 455678888765333233 578899999999998766542 34456778999987
No 205
>2bdr_A Ureidoglycolate hydrolase; all beta protein, structural genomics, PSI, protein structur initiative, northeast structural genomics consortium; 1.60A {Pseudomonas putida} SCOP: b.82.1.14
Probab=75.00 E-value=8.2 Score=30.41 Aligned_cols=69 Identities=10% Similarity=-0.049 Sum_probs=50.0
Q ss_pred ccCCccCCCccEEEEEEeCeEEEEEEecCCC----CceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEEE
Q 042226 104 VVPPHVHPRATEILTVIEGSLEVGFVTSNPE----NRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISAL 172 (216)
Q Consensus 104 ~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~----~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~ 172 (216)
+..+=.||.++|.+.-+.|...+-++.+.++ .+++.+....|+.+.+-+|++|...-.-+++..++++-
T Consensus 70 v~~lERHp~~sQafiPl~~~~~lVvVAp~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~~~dF~vvd 142 (175)
T 2bdr_A 70 VRMLERHPLGSQAFIPLLGNPFLIVVAPVGDAPVSGLVRAFRSNGRQGVNYHRGVWHHPVLTIEKRDDFLVVD 142 (175)
T ss_dssp ECEEEECTTBCEEEEESSCCCEEEEEECSSSSCCGGGCEEEEECSSCEEEECTTCEECSCEESSSEEEEEEEE
T ss_pred eeEEeeCCCCceEEEECCCCEEEEEEeCCCCCCCccceEEEEeCCCeEEEeCCCceecccccCCCCceEEEEE
Confidence 3445678989999999999876555544321 35678999999999999999996644444556666543
No 206
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=74.41 E-value=34 Score=28.80 Aligned_cols=70 Identities=9% Similarity=-0.052 Sum_probs=47.6
Q ss_pred eEEEEEEEcCCcccCCccCCCccEE-EEEEeCeEEEEEEecCCCCceEEEEe-c-C--------CcEEEEcCCCeEEEEE
Q 042226 92 VSLARIDYAPWGVVPPHVHPRATEI-LTVIEGSLEVGFVTSNPENRLITKVL-Q-K--------GDVFVFPIGLVHFQRN 160 (216)
Q Consensus 92 vs~~~~~l~pG~~~ppH~Hp~a~Ei-~yVl~G~~~~~~~~~~~~~~~~~~~L-~-~--------GDv~~~P~G~~H~~~N 160 (216)
+.+..++|++|.......-. .|+ ++.+.|++++.+. ++ ++.+ . . .|++++|+|.--.+..
T Consensus 29 ~~f~~~~L~~Ge~~~~~~~~--~E~~iv~l~G~~~V~~~-----g~--~~~~~g~R~svF~~~~p~~lYvp~g~~v~i~a 99 (270)
T 2qjv_A 29 VGFDVWQLXAGESITLPSDE--RERCLVLVAGLASVXAA-----DS--FFYRIGQRMSPFERIPAYSVYLPHHTEAXVTA 99 (270)
T ss_dssp CEEEEEEECTTCEEEECCSS--EEEEEEEEESCEEEEET-----TE--EEEEECCCSSGGGCSCCCEEEECSSCCEEEEE
T ss_pred eEEEEEEecCCCEEEecCCC--cEEEEEEecceEEEEEC-----CE--EEeccccccccccCCCCcEEEECCCCEEEEEe
Confidence 67888889999876655443 465 6677999999873 33 3433 2 2 4999999999666655
Q ss_pred CCCCcEEEEEEE
Q 042226 161 VGHGNAFSISAL 172 (216)
Q Consensus 161 ~g~~~a~~l~~~ 172 (216)
.+ ++++....
T Consensus 100 ~~--~~~~~v~s 109 (270)
T 2qjv_A 100 ET--DLELAVCS 109 (270)
T ss_dssp SS--SEEEEEEE
T ss_pred cC--CceEEEEe
Confidence 44 46655443
No 207
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=74.37 E-value=10 Score=29.33 Aligned_cols=70 Identities=13% Similarity=0.220 Sum_probs=42.8
Q ss_pred EEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEEE
Q 042226 95 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSISA 171 (216)
Q Consensus 95 ~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~ 171 (216)
....+++|...-.--.+ ...+++|++|.+.+. .+++ +.+.....+.+||++-.| ..+..... +++.++.+
T Consensus 28 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~-~~~~-G~~~~~~~~~~G~~~G~~--~~~~~~A~--~~~~v~~i 97 (220)
T 2fmy_A 28 REQRYSKKAILYTPNTE-RNLVFLVKSGRVRVY-LAYE-DKEFTLAILEAGDIFCTH--TRAFIQAM--EDTTILYT 97 (220)
T ss_dssp EEEEECTTCEEECTTCS-SCEEEEEEESEEEEE-EECS-SCEEEEEEEETTCEEESC--SSSEEEES--SSEEEEEE
T ss_pred heeEeCCCCEEECCCCC-CCeEEEEEecEEEEE-ECCC-CCEEEEEEcCCCCEeCCc--cceEEEEc--CcEEEEEE
Confidence 45667888754322223 578999999999994 4443 244456788999988662 22333333 44555543
No 208
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=73.77 E-value=8.4 Score=29.65 Aligned_cols=52 Identities=13% Similarity=0.071 Sum_probs=36.2
Q ss_pred EEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEE
Q 042226 95 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVF 148 (216)
Q Consensus 95 ~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 148 (216)
....+++|...-..-.+ ...+++|++|.+.+...++++ .+.....+.+||++
T Consensus 27 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G-~~~~~~~~~~G~~~ 78 (220)
T 3dv8_A 27 ITQHVKKGTIIHNGNMD-CTGLLLVKSGQLRTYILSDEG-REITLYRLFDMDMC 78 (220)
T ss_dssp EEEEECTTCEEEEGGGC-CCEEEEEEESCEEEEEECTTS-CEEEEEEECTTCEE
T ss_pred ceEEeCCCCEEECCCCC-cceEEEEEeceEEEEEECCCC-CEEEEEecCCCCee
Confidence 45667888654322223 578999999999998876642 34445788999996
No 209
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=73.27 E-value=2.7 Score=37.33 Aligned_cols=23 Identities=17% Similarity=0.093 Sum_probs=20.1
Q ss_pred eEEEEecCCcEEEEcCCCeEEEE
Q 042226 137 LITKVLQKGDVFVFPIGLVHFQR 159 (216)
Q Consensus 137 ~~~~~L~~GDv~~~P~G~~H~~~ 159 (216)
+....|++||.+++|+|.+|...
T Consensus 239 Ln~v~l~pGd~~fipAG~~HAy~ 261 (394)
T 2wfp_A 239 LNVVKLNPGEAMFLFAETPHAYL 261 (394)
T ss_dssp EEEEEECTTCEEEECTTCCEEEE
T ss_pred heEEECCCCCEEEcCCCCceEcC
Confidence 44678999999999999999973
No 210
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=73.14 E-value=30 Score=26.68 Aligned_cols=97 Identities=12% Similarity=0.079 Sum_probs=63.0
Q ss_pred CCCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCe-EEEEEEecCCCCceEEEEec----C
Q 042226 70 NPLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGS-LEVGFVTSNPENRLITKVLQ----K 144 (216)
Q Consensus 70 ~~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~-~~~~~~~~~~~~~~~~~~L~----~ 144 (216)
.+.|+..+....+...+-+ .-.+..+.-+.+|....+|.-.++.|+-+...|. +++.+..++ +...+..|. +
T Consensus 19 HPEGG~yrEt~Rs~~~~~R-~~~TaIYfLL~~g~~S~wHRv~~sdEiW~~h~G~pL~l~~~~~d--g~~~~~~LG~d~~~ 95 (154)
T 1znp_A 19 HPEGGFYHQTFRDKAGGER-GHSTAIYYLLEKGVRSHWHRVTDAVEVWHYYAGAPIALHLSQDG--REVQTFTLGPAILE 95 (154)
T ss_dssp CTTSSEEEEEEECSSSTTT-CSCEEEEEEEESSCCEEEEEETTSCEEEEEEEESCEEEEEESSS--SCCEEEEESSCTTT
T ss_pred CCCCccEEEEEeCCCCCCC-cceeEEEEEecCCCCCcceeccCCCEEEEeECCCCEEEEEEcCC--CcEEEEEeCCCccc
Confidence 4678877777665432222 2245566667777766666542489999988888 777776654 444456664 4
Q ss_pred CcE--EEEcCCCeEEEEECCCCcEEEEEE
Q 042226 145 GDV--FVFPIGLVHFQRNVGHGNAFSISA 171 (216)
Q Consensus 145 GDv--~~~P~G~~H~~~N~g~~~a~~l~~ 171 (216)
|+. ++||+|........| .-.+++.
T Consensus 96 Ge~pQ~vVP~G~WqaA~~~g--~~~LVsC 122 (154)
T 1znp_A 96 GERPQVIVPANCWQSAESLG--DFTLVGC 122 (154)
T ss_dssp TEESEEEECTTCEEEEEESS--SEEEEEE
T ss_pred CcccEEEEcCCEEEEeeECC--CeEEEEE
Confidence 664 899999999887664 3444443
No 211
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=72.94 E-value=7.4 Score=29.77 Aligned_cols=52 Identities=19% Similarity=0.308 Sum_probs=34.5
Q ss_pred EEEEcCCcccCCccCCCc--cEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEE
Q 042226 96 RIDYAPWGVVPPHVHPRA--TEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFV 149 (216)
Q Consensus 96 ~~~l~pG~~~ppH~Hp~a--~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~ 149 (216)
...+++|...-..-.+ . ..+++|++|.+.+...++++ .+.....+.+||++-
T Consensus 7 ~~~~~~g~~i~~~g~~-~~~~~~y~v~~G~v~~~~~~~~G-~~~~~~~~~~g~~~G 60 (202)
T 2zcw_A 7 TVSFKAGDVILYPGVP-GPRDRAYRVLEGLVRLEAVDEEG-NALTLRLVRPGGFFG 60 (202)
T ss_dssp CEEECTTCEEECSBSC-CTTCCCEEEEESCEEEEEECTTS-CEEEEEEECTTCEEC
T ss_pred EEEECCCCEEECCCCC-CCCCeEEEEEeCEEEEEEECCCC-cEEEEEEecCCCEee
Confidence 3456777654322222 4 56899999999998766542 344567889999874
No 212
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=72.39 E-value=9.6 Score=30.26 Aligned_cols=54 Identities=11% Similarity=0.095 Sum_probs=37.1
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFV 149 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~ 149 (216)
.....+++|...-.---+ ...+++|++|.+.+...++++ .+.....+.+||++-
T Consensus 32 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G-~~~~~~~~~~G~~~G 85 (250)
T 3e6c_C 32 GLIRDFAKGSAVIMPGEE-ITSMIFLVEGKIKLDIIFEDG-SEKLLYYAGGNSLIG 85 (250)
T ss_dssp SEEEEECTTCEEECTTCC-CCSEEEEEESCEEEEEECTTS-CEEEEEEECTTCEEC
T ss_pred CeEEEECCCCEEECCCCC-CCeEEEEEeeEEEEEEECCCC-CEEEEEEecCCCEEe
Confidence 355667888654322223 567899999999998876542 344567789999884
No 213
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=72.22 E-value=19 Score=27.79 Aligned_cols=70 Identities=14% Similarity=0.097 Sum_probs=42.7
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECCCCcEEEEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSIS 170 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 170 (216)
+....+++|...-.--.+ ...+++|++|.+.+. .++++ .+.....+.+||++- ....+..... +++.++.
T Consensus 23 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~-~~~~G-~~~~~~~~~~G~~fG--~~~~~~~~A~--~~~~v~~ 92 (222)
T 1ft9_A 23 FRSKIHAKGSLVCTGEGD-ENGVFVVVDGRLRVY-LVGEE-REISLFYLTSGDMFC--MHSGCLVEAT--ERTEVRF 92 (222)
T ss_dssp CEEEEECTTCEEECTTCC-CCCEEEEEESEEEEE-EEETT-EEEEEEEEETTCEEE--SCSSCEEEES--SCEEEEE
T ss_pred CcEEEECCCCEEECCCCC-CCeEEEEEecEEEEE-ECCCC-CEEEEEEcCCCCEec--CCCCEEEEEc--cceEEEE
Confidence 345667888754322233 567999999999996 44431 334457889999987 3333344443 4455544
No 214
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=71.43 E-value=12 Score=30.32 Aligned_cols=54 Identities=22% Similarity=0.254 Sum_probs=37.1
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVF 148 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 148 (216)
+....+.+|...-..-.+ +..+++|++|++.+.....+++.......+.+||++
T Consensus 180 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~f 233 (291)
T 2qcs_B 180 LEPVQFEDGQKIVVQGEP-GDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYF 233 (291)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEE
T ss_pred cEEEEECCCCEEEeCCcc-CCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEe
Confidence 456678888765433333 678999999999997654431122456789999988
No 215
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=69.30 E-value=14 Score=26.67 Aligned_cols=49 Identities=29% Similarity=0.371 Sum_probs=32.8
Q ss_pred EEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEE
Q 042226 95 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVF 150 (216)
Q Consensus 95 ~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~ 150 (216)
....+++|...-.- ......+.+|++|++.+.. . ++ ....+.+||++-.
T Consensus 51 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~--~---~~-~~~~~~~G~~fG~ 99 (160)
T 4f8a_A 51 QTVHCAPGDLIYHA-GESVDSLCFVVSGSLEVIQ--D---DE-VVAILGKGDVFGD 99 (160)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEESEEEEEE--T---TE-EEEEEETTCEEEC
T ss_pred eeeeeCCCCEEEeC-CCCccEEEEEEeeEEEEEE--C---CE-EEEEecCCCEeCc
Confidence 44567777643222 2226789999999999865 1 22 4678899998743
No 216
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=68.47 E-value=12 Score=28.65 Aligned_cols=49 Identities=18% Similarity=0.250 Sum_probs=34.4
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVF 148 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 148 (216)
+....+.||..+-.--.+ +..+.+|++|++.+.. ++ ++ ....+.+||++
T Consensus 94 ~~~~~~~~ge~I~~~G~~-~~~ly~I~~G~v~~~~--~~--g~-~~~~l~~G~~f 142 (198)
T 2ptm_A 94 LEFEVFQPADYVIQEGTF-GDRMFFIQQGIVDIIM--SD--GV-IATSLSDGSYF 142 (198)
T ss_dssp CEEEEECTTCEEECTTSC-CSEEEEEEECCEEEEC--TT--SC-EEEEECTTCEE
T ss_pred ccceeeCCCCEEEECCCc-CcEEEEEEeCEEEEEe--cC--Ce-EEEEecCCCEe
Confidence 456678888754322223 6789999999999865 32 44 46789999987
No 217
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=65.89 E-value=19 Score=26.04 Aligned_cols=48 Identities=13% Similarity=0.240 Sum_probs=33.1
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVF 148 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 148 (216)
+....+.+|..+---=.+ ...+++|++|.+.+.. . ++ ....+.+||++
T Consensus 61 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~--~---~~-~~~~~~~G~~f 108 (154)
T 3pna_A 61 MFPVSFIAGETVIQQGDE-GDNFYVIDQGEMDVYV--N---NE-WATSVGEGGSF 108 (154)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEESCEEEEE--T---TE-EEEEECTTCEE
T ss_pred ceEEEECCCCEEEeCCCC-CCeEEEEEecEEEEEE--C---CE-EEEEecCCCEe
Confidence 345677888654322233 6789999999999876 2 34 35678999986
No 218
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=65.55 E-value=15 Score=28.87 Aligned_cols=72 Identities=7% Similarity=0.013 Sum_probs=42.0
Q ss_pred EEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcC---CC----eEEEEECCCCcEEE
Q 042226 96 RIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPI---GL----VHFQRNVGHGNAFS 168 (216)
Q Consensus 96 ~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~---G~----~H~~~N~g~~~a~~ 168 (216)
...+++|...-.- -.....+++|++|.+.+...++++ .+.....+ +||++-... +. .+...-.. +++.+
T Consensus 20 ~~~~~~ge~i~~~-G~~~~~~y~I~~G~v~~~~~~~~G-~e~~~~~~-~G~~~Ge~~~~~~~~~~~~~~~~a~~-~~~~v 95 (238)
T 2bgc_A 20 PKQFHKKELIFNQ-WDPQEYCIFLYDGITKLTSISENG-TIMNLQYY-KGAFVIMSGFIDTETSVGYYNLEVIS-EQATA 95 (238)
T ss_dssp CEEEETTCEEECT-TCCCCEEEEEEESEEEEEEECTTS-CEEEEEEE-ESSEEEESBCTTTCCBSCCCEEEECS-SEEEE
T ss_pred EEEECCCCEEEeC-CCCCceEEEEEecEEEEEEECCCC-CEEEEEEc-CCCEecchhhhcCCCcCcceeEEEEE-cceEE
Confidence 3456777654221 222577899999999998766542 33334556 899885542 22 34444443 45555
Q ss_pred EEE
Q 042226 169 ISA 171 (216)
Q Consensus 169 l~~ 171 (216)
+.+
T Consensus 96 ~~i 98 (238)
T 2bgc_A 96 YVI 98 (238)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 219
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=64.52 E-value=19 Score=30.73 Aligned_cols=68 Identities=10% Similarity=0.007 Sum_probs=42.2
Q ss_pred EEEcCCcccCCccCCCccEE-EEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECC--CCcEEEEEE
Q 042226 97 IDYAPWGVVPPHVHPRATEI-LTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVG--HGNAFSISA 171 (216)
Q Consensus 97 ~~l~pG~~~ppH~Hp~a~Ei-~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g--~~~a~~l~~ 171 (216)
++|+.|......+--...|+ ++.+.|.+.+.+. ++ ++.|..-|.+++|+|.-....... ..++++...
T Consensus 62 l~L~~~~~~~~~~fl~~rE~~iV~lgG~~~V~vd-----g~--~f~lg~~dalYVp~G~~~v~~as~d~~~~a~fav~ 132 (289)
T 1ywk_A 62 LEIILDKELGVDYFLERRELGVINIGGPGFIEID-----GA--KETMKKQDGYYIGKETKHVRFSSENPDNPAKFYIS 132 (289)
T ss_dssp EECCCSGGGTSSSTTTTEEEEEEECSSCEEEEET-----TE--EEEECTTCEEEECTTCCCEEEEESCTTSCCCEEEE
T ss_pred EEcCCCceecccccCCCcEEEEEEccCeEEEEEC-----CE--EEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEEE
Confidence 34555544433332235676 5566899999873 33 569999999999999764444432 345555543
No 220
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=64.40 E-value=22 Score=25.04 Aligned_cols=48 Identities=15% Similarity=0.220 Sum_probs=32.5
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVF 148 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 148 (216)
+....+.+|...-.- ......+.+|++|++.+.. + ++ ....+.+||++
T Consensus 46 ~~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~---~--g~-~~~~~~~G~~f 93 (139)
T 3ocp_A 46 MYPVEYGKDSCIIKE-GDVGSLVYVMEDGKVEVTK---E--GV-KLCTMGPGKVF 93 (139)
T ss_dssp CEEEEECSSCEEECT-TSCCCEEEEEEECCEEEEE---T--TE-EEEEECTTCEE
T ss_pred cEEEecCCCCEEEeC-CCcCCEEEEEEeCEEEEEE---C--CE-EEEEeCCCCEe
Confidence 345667887654222 2236789999999999843 2 34 46788999986
No 221
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=64.20 E-value=8.5 Score=29.61 Aligned_cols=48 Identities=17% Similarity=0.180 Sum_probs=32.7
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVF 148 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 148 (216)
+....+.||..+-..-.+ +.++.+|++|++.+.. .+ ++ ...+.+||++
T Consensus 95 ~~~~~~~~ge~I~~~g~~-~~~ly~I~~G~v~v~~--~~--g~--~~~l~~G~~f 142 (202)
T 3bpz_A 95 LKFEVFQPGDYIIREGTI-GKKMYFIQHGVVSVLT--KG--NK--EMKLSDGSYF 142 (202)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEECEEEEEC--TT--SC--CEEEETTCEE
T ss_pred CCceEECCCCEEEECCCc-CCeEEEEeccEEEEEE--CC--Ce--EEEEcCCCEe
Confidence 445678888765333233 5789999999998853 32 44 3578999987
No 222
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=63.65 E-value=15 Score=30.50 Aligned_cols=52 Identities=23% Similarity=0.232 Sum_probs=35.6
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVF 148 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 148 (216)
+....+++|..+-.-=.+ +..+++|++|.+.+...+.+ ++.....+.+||++
T Consensus 36 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~--g~~~~~~~~~G~~f 87 (333)
T 4ava_A 36 VQPLRAAAGQVLLRQGEP-AVSFLLISSGSAEVSHVGDD--GVAIIARALPGMIV 87 (333)
T ss_dssp CEEEEECTTCEEECTTSB-CCCEEEEEECCEEEEEECTT--CCEEEEEECTTCEE
T ss_pred CeEEEECCCCEEEeCCCc-CCEEEEEEeeEEEEEEECCC--CcEEEEEecCCCEe
Confidence 345667787643221122 56789999999999877654 44456788999987
No 223
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=63.17 E-value=5.8 Score=35.76 Aligned_cols=22 Identities=18% Similarity=0.128 Sum_probs=19.3
Q ss_pred EEEecCCcEEEEcCCCeEEEEE
Q 042226 139 TKVLQKGDVFVFPIGLVHFQRN 160 (216)
Q Consensus 139 ~~~L~~GDv~~~P~G~~H~~~N 160 (216)
...|++||.+++|+|.+|....
T Consensus 267 ~v~L~pGea~flpAg~~HAYl~ 288 (440)
T 1pmi_A 267 HVGLNKGEAMFLQAKDPHAYIS 288 (440)
T ss_dssp EEEECTTCEEEECTTCCEEEEE
T ss_pred eEecCCCCEEecCCCCccccCC
Confidence 5679999999999999998744
No 224
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=61.00 E-value=9.1 Score=33.28 Aligned_cols=33 Identities=24% Similarity=0.363 Sum_probs=26.4
Q ss_pred eEEEEecCCcEEEEcCCCeEEEEECCCCcEEEE
Q 042226 137 LITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSI 169 (216)
Q Consensus 137 ~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 169 (216)
++..+=++||.+++++|..|+..|.|-.-.+.+
T Consensus 278 vyr~~QkpGd~Vi~~PgayH~v~n~G~~~n~aw 310 (332)
T 2xxz_A 278 VYRFVQRPGDLVWINAGTVHWVQATGWCNNIAW 310 (332)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSSEEEEEE
T ss_pred eEEEEECCCCEEEECCCceEEEEecceeeEEEE
Confidence 456677999999999999999999996444333
No 225
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=60.17 E-value=19 Score=29.23 Aligned_cols=53 Identities=23% Similarity=0.358 Sum_probs=35.8
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEe-cCCCCceEEEEecCCcEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVT-SNPENRLITKVLQKGDVF 148 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~-~~~~~~~~~~~L~~GDv~ 148 (216)
+....+.+|..+-.- -..+..+++|++|++.+.... .+ +.......+.+||++
T Consensus 180 ~~~~~~~~g~~I~~~-G~~~~~~yiI~~G~v~~~~~~~~~-g~~~~~~~l~~G~~f 233 (299)
T 3shr_A 180 LEETHYENGEYIIRQ-GARGDTFFIISKGKVNVTREDSPN-EDPVFLRTLGKGDWF 233 (299)
T ss_dssp CEEEEECTTCEEECT-TCEECEEEEEEESEEEEEECCSSS-CCCEEEEEEETTCEE
T ss_pred ccEEEECCCCEEEeC-CCCCCEEEEEEeeEEEEEEecCCC-CcceEEEEcCCCCEe
Confidence 355667888654322 223678899999999998765 22 234456789999987
No 226
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=59.09 E-value=4.6 Score=31.39 Aligned_cols=54 Identities=17% Similarity=0.187 Sum_probs=35.8
Q ss_pred EEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEE
Q 042226 95 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVF 150 (216)
Q Consensus 95 ~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~ 150 (216)
....+++|...-..-.+ ...+++|++|.+.+...++++ .+.....+.+||++-.
T Consensus 33 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~G-~~~~~~~~~~g~~~G~ 86 (227)
T 3dkw_A 33 DLVNLDKGAYVFRQGEP-AHAFYYLISGCVKIYRLTPEG-QEKILEVTNERNTFAE 86 (227)
T ss_dssp EEEECCTTEEEECTTSB-CCEEEEEEESCEECCBCCGGG-CCBCCCEECTTEEESC
T ss_pred EEEEECCCCEEEcCCCc-cceEEEEEeCEEEEEEECCCC-CEEEEEEcCCCCEeee
Confidence 45567777654332233 578999999999987655432 3334567899998743
No 227
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=57.58 E-value=18 Score=27.86 Aligned_cols=49 Identities=27% Similarity=0.255 Sum_probs=34.0
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFV 149 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~ 149 (216)
+....+.||..+-.---+ +..+.+|++|++.+.. . +. ....+.+||++=
T Consensus 98 ~~~~~~~~ge~I~~~G~~-~~~ly~I~~G~v~v~~--~---~~-~~~~l~~G~~fG 146 (212)
T 3ukn_A 98 IKTSFCAPGEFLIRQGDA-LQAIYFVCSGSMEVLK--D---NT-VLAILGKGDLIG 146 (212)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEECCEEEES--S---SC-EEEEECTTCEEE
T ss_pred hheEEeCCCCEEEECCCc-ccEEEEEEecEEEEEE--C---Ce-EEEEecCCCCcC
Confidence 455678888754322223 6789999999999864 1 32 467899999884
No 228
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=57.10 E-value=28 Score=30.38 Aligned_cols=52 Identities=6% Similarity=-0.032 Sum_probs=35.8
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVF 148 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 148 (216)
+....+.+|..+--.=.+ +..+++|++|++.+... .+ +.......+.+||++
T Consensus 168 ~~~~~~~~Ge~I~~qGd~-~d~~YiI~sG~v~v~~~-~~-G~~~~v~~l~~G~~f 219 (416)
T 3tnp_B 168 MFEKLVKEGEHVIDQGDD-GDNFYVIDRGTFDIYVK-CD-GVGRCVGNYDNRGSF 219 (416)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEECEEEEEEE-CS-SCEEEEEEEESCCEE
T ss_pred cEEEEeCCCCEEEeCCCC-CceEEEEEeeEEEEEEe-cC-CCEEEEEEecCCCEE
Confidence 455678888754333333 68899999999998773 32 133446778999977
No 229
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=57.00 E-value=1e+02 Score=27.05 Aligned_cols=43 Identities=14% Similarity=0.007 Sum_probs=36.7
Q ss_pred cEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEE
Q 042226 114 TEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQR 159 (216)
Q Consensus 114 ~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~ 159 (216)
.--..|++|++++.+..+ ++..+..|+++|..++-+-+.|.+.
T Consensus 355 e~hY~v~~G~lTL~W~~~---dGt~~a~L~PDgSAwv~PFV~H~w~ 397 (443)
T 3g7d_A 355 ENHYVVTEGRLTLEWDGP---DGPASVELEPDGSAWTGPFVRHRWH 397 (443)
T ss_dssp EEEEEEEESCEEEEEEET---TEEEEEEECTTCEEEECTTCCEEEE
T ss_pred cceEEEecCceEEEecCC---CCccceEECCCCceeeccccccccc
Confidence 334558899999999876 4557999999999999999999996
No 230
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=52.02 E-value=30 Score=30.13 Aligned_cols=56 Identities=16% Similarity=0.046 Sum_probs=37.3
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCC-ceEEEEecCCcEEEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPEN-RLITKVLQKGDVFVF 150 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~-~~~~~~L~~GDv~~~ 150 (216)
+....+++|..+-. -...+..+++|++|++.+.....++.. +.....+.+||++-.
T Consensus 65 ~~~~~~~~g~~i~~-~Gd~~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fGe 121 (469)
T 1o7f_A 65 GYYENLEKGITLFR-QGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGE 121 (469)
T ss_dssp CEEEEECTTCEEEC-TTSBCCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEECG
T ss_pred ceEEEECCCCEEEe-CCCCCCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcch
Confidence 34557888865422 222367899999999999876554110 245778999998843
No 231
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=51.88 E-value=17 Score=28.20 Aligned_cols=47 Identities=9% Similarity=0.065 Sum_probs=32.5
Q ss_pred EEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEE
Q 042226 95 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVF 148 (216)
Q Consensus 95 ~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 148 (216)
....+++|...----.+ +..+++|++|++.+... ++. ...+++||++
T Consensus 31 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~v~~~-----~~~-~~~~~~g~~f 77 (246)
T 3of1_A 31 EEKSVPKGATIIKQGDQ-GDYFYVVEKGTVDFYVN-----DNK-VNSSGPGSSF 77 (246)
T ss_dssp EEEEECTTCEEECTTCC-CCEEEEEEECCEEEEST-----TSC-CEEECTTCEE
T ss_pred ceEEECCCCEEEecCCC-CCEEEEEEeeEEEEEEC-----CEE-EEecCCCCee
Confidence 45667777654322233 68899999999998652 222 4789999988
No 232
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=51.03 E-value=17 Score=25.63 Aligned_cols=48 Identities=10% Similarity=0.207 Sum_probs=31.5
Q ss_pred EEEEEEc-CCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEE
Q 042226 94 LARIDYA-PWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVF 148 (216)
Q Consensus 94 ~~~~~l~-pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 148 (216)
+....+. +|..+- +-......+++|++|++.+.. .+ ++ ...+.+||++
T Consensus 39 ~~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~--~~--g~--~~~l~~G~~f 87 (134)
T 2d93_A 39 MIFEVVEQAGAIIL-EDGQELDSWYVILNGTVEISH--PD--GK--VENLFMGNSF 87 (134)
T ss_dssp EEEEEECSSSCEEE-CTTCEECEEEECCBSCEEEEC--SS--SC--EEEECTTCEE
T ss_pred heEEEecCCCCEEE-eCCCCCCeEEEEEeCEEEEEc--CC--Cc--EEEecCCCcc
Confidence 3456677 776432 222335678999999999863 32 44 3679999976
No 233
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=49.85 E-value=18 Score=25.36 Aligned_cols=45 Identities=24% Similarity=0.279 Sum_probs=30.6
Q ss_pred EEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEE
Q 042226 95 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVF 148 (216)
Q Consensus 95 ~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 148 (216)
....+++|...-.--.+ ...+.+|++|++.+... + ...+.+||++
T Consensus 35 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~-----~---~~~~~~G~~~ 79 (138)
T 1vp6_A 35 RARTVPAGAVICRIGEP-GDRMFFVVEGSVSVATP-----N---PVELGPGAFF 79 (138)
T ss_dssp EEEEECTTCEEECTTSC-CCEEEEEEESCEEECSS-----S---CEEECTTCEE
T ss_pred cEEEeCCCCEEEeCCCC-cceEEEEEeeEEEEEeC-----C---cceECCCCEe
Confidence 45678888754332233 57899999999998542 2 2478888876
No 234
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=49.41 E-value=40 Score=26.99 Aligned_cols=48 Identities=13% Similarity=0.240 Sum_probs=33.9
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVF 148 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 148 (216)
+....+++|..+--.-.+ +..+++|++|++.+.. . ++ ....+.+||++
T Consensus 62 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~--~---g~-~~~~l~~G~~f 109 (291)
T 2qcs_B 62 MFPVSFIAGETVIQQGDE-GDNFYVIDQGEMDVYV--N---NE-WATSVGEGGSF 109 (291)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEECCEEEEE--T---TE-EEEEECTTCEE
T ss_pred ccEEEECCCCEEEeCCCC-CceEEEEeeeEEEEEE--C---Ce-EEEEcCCCCcc
Confidence 355668888754332233 6789999999999876 2 33 36789999987
No 235
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=46.67 E-value=1.1e+02 Score=24.48 Aligned_cols=109 Identities=16% Similarity=0.110 Sum_probs=64.4
Q ss_pred eEEEEEEEcCCc-ccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecC----Cc--EEEEcCCCeEEEEEC-CC
Q 042226 92 VSLARIDYAPWG-VVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQK----GD--VFVFPIGLVHFQRNV-GH 163 (216)
Q Consensus 92 vs~~~~~l~pG~-~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~----GD--v~~~P~G~~H~~~N~-g~ 163 (216)
.+..+.-+.++. ...+|.- ++.|+-+...|.....+..++ ++..+..|.+ |+ -++||+|........ ++
T Consensus 79 ~TaIYfLL~~~~~~S~wHRv-~sdEiW~~h~G~p~~~li~~d--g~~~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~~~~~ 155 (203)
T 1xe7_A 79 STLIYYLLTPDSPIGKFHKN-INRIIHILQRGKGQYVLVYPD--GQVKSFKVGFDYKNGEVSQWVVPGGVFKASFLLPNE 155 (203)
T ss_dssp CEEEEEEEBTTBCEEEEEEE-SSCEEEEEEEECEEEEEECTT--SCEEEEEESSCGGGTCBSEEEECTTCEEEEEECCCT
T ss_pred eeEEEEEEcCCCCcccceee-CCCEEEEEEcCCccEEEEcCC--CCEEEEEeCCCcccCcccEEEEcCCEEEEeEecCCC
Confidence 355556677775 4555554 489999999996655555554 5555666654 54 479999999988765 22
Q ss_pred CcE--EEEEEEeCCCCceeEeehhhhcCCCCCCHH-HHHHHcCCCHHHHHHHh
Q 042226 164 GNA--FSISALSSQNPGVITIANAVFGSNPAIAAD-ILAKAFQVDKSVVDQLQ 213 (216)
Q Consensus 164 ~~a--~~l~~~~s~~pg~~~~~~~lf~~~p~~p~~-vl~~af~~~~~~v~~l~ 213 (216)
+-. .+++..= .||+..-. |.- .+.+ -|.+-|. .+.++.|+
T Consensus 156 ~~~~~tLVgCtV--aPGFdF~d---Fel---~~~~~~L~~~~P--~~~~~~l~ 198 (203)
T 1xe7_A 156 EFDNGFLISEVV--VPGFDFED---HTF---LKGEDELKHLVG--PEKAAELA 198 (203)
T ss_dssp TTTTCEEEEEEE--SSCCCGGG---EEE---CCHHHHHHHHHC--HHHHHHTG
T ss_pred CcccceEEEEEe--cCCccchh---cEe---cCCcHHHHHHCC--HHHHHHHH
Confidence 221 3444332 45543322 332 3444 4444453 66666664
No 236
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=44.91 E-value=22 Score=32.58 Aligned_cols=81 Identities=21% Similarity=0.222 Sum_probs=51.0
Q ss_pred cCCCCCccCceEEEEEEEcCCcccCCccCCC-ccEEEEEEeCeEEEEEEecCC---------------------------
Q 042226 82 AQIPGLNTLGVSLARIDYAPWGVVPPHVHPR-ATEILTVIEGSLEVGFVTSNP--------------------------- 133 (216)
Q Consensus 82 ~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~-a~Ei~yVl~G~~~~~~~~~~~--------------------------- 133 (216)
..+||+|+.-+.+ -.+|...++|.-.. -.-+-|-.-|.-..++.-+..
T Consensus 229 ~~I~GVNtpqLYi----gm~gS~t~wH~Ed~~l~SINynhggg~c~WY~VP~e~~~k~e~l~~k~~~d~l~~~~~pspe~ 304 (510)
T 4ask_A 229 HTILGMNTVQLYM----KVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFCDRHGVDYLTGSWWPILDD 304 (510)
T ss_dssp SCCTTTTSCEEEE----ECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHTTCCTTTSCBCCCHHH
T ss_pred CcCCCcChhheEE----ccccccccceecCCcceeEEEeecCCceeEEEECHHHHHHHHHHHHHhCcchhhccccCCHHH
Confidence 5778888653333 35777888886331 234556565543333322210
Q ss_pred ----CCceEEEEecCCcEEEEcCCCeEEEEECCCCcE
Q 042226 134 ----ENRLITKVLQKGDVFVFPIGLVHFQRNVGHGNA 166 (216)
Q Consensus 134 ----~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a 166 (216)
+=.++..+=++||.+++++|..|+.+|.|-..-
T Consensus 305 L~kagIPvyr~iQkPGdfVit~PgtyH~Vqs~Gf~~n 341 (510)
T 4ask_A 305 LYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNN 341 (510)
T ss_dssp HHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEE
T ss_pred HHhCCCCeEEEEECCCCEEEECCCceEEEEecCeeee
Confidence 112345677999999999999999999986433
No 237
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=44.81 E-value=34 Score=29.32 Aligned_cols=51 Identities=16% Similarity=0.154 Sum_probs=32.6
Q ss_pred EEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEE
Q 042226 97 IDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVF 148 (216)
Q Consensus 97 ~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 148 (216)
..+.+|..+--- -..+..+++|++|++.+.....+++.......+.+||.|
T Consensus 274 ~~~~~ge~I~~e-Gd~~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~Gd~f 324 (381)
T 4din_B 274 VQFEDGEKIVVQ-GEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYF 324 (381)
T ss_dssp CCBCSSCBSSCT-TSBCCEEEEEEESCEEEECCSSSSSCCCEEEEECTTCEE
T ss_pred ccCCCCCEEEeC-CCcCCEEEEEEeCEEEEEEecCCCCceEEEEEeCCCCEe
Confidence 445666543222 223678999999999998754431113346789999987
No 238
>1s4c_A Protein HI0227; double-stranded beta-helix, structural genomics, unknown function, structural genomics, unknown function; 2.20A {Haemophilus influenzae} SCOP: b.82.2.7 PDB: 1jop_A
Probab=44.34 E-value=70 Score=24.00 Aligned_cols=56 Identities=14% Similarity=0.105 Sum_probs=40.0
Q ss_pred cCCccCCCccEEEEEEeCeEEEEEEecCC------------------CC-ceEEEEecCCcEEEEcCCCeEEEEE
Q 042226 105 VPPHVHPRATEILTVIEGSLEVGFVTSNP------------------EN-RLITKVLQKGDVFVFPIGLVHFQRN 160 (216)
Q Consensus 105 ~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~------------------~~-~~~~~~L~~GDv~~~P~G~~H~~~N 160 (216)
..+=.|.+=..+-|+++|+=++++....+ +. ......|++|+..+|-++-+|....
T Consensus 60 ~~~E~Hr~YiDIq~~l~G~E~i~~~~~~~~~~~~~~y~~e~D~~~~~~~~~~~~v~l~~G~FaiFfP~d~H~p~~ 134 (155)
T 1s4c_A 60 KKAELHHEYLDVQVLIRGTENIEVGATYPNLSKYEDYNEADDYQLCADIDDKFTVTMKPKMFAVFYPYEPHKPCC 134 (155)
T ss_dssp SCEEECSSEEEEEEEEESCEEEEECCSCCCGGGSCCCBTTTTBEEESCCTTCEEEEECTTEEEEECTTCCEEEEE
T ss_pred cccccccceEEEEecceeeEEEEEEecccCcccCCCCCcCCCEEecCCCCccEEEEeCCCEEEEECCCccccccc
Confidence 45556777788999999988877764110 01 1124688999999999999998643
No 239
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=43.97 E-value=42 Score=27.07 Aligned_cols=48 Identities=15% Similarity=0.211 Sum_probs=33.5
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVF 148 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 148 (216)
+....+++|..+--.-.+ +..+++|++|++.+.. . ++ ....+.+||++
T Consensus 62 ~~~~~~~~g~~i~~~G~~-~~~~yiI~~G~v~v~~--~---g~-~~~~~~~G~~f 109 (299)
T 3shr_A 62 MYPVEYGKDSCIIKEGDV-GSLVYVMEDGKVEVTK--E---GV-KLCTMGPGKVF 109 (299)
T ss_dssp CEEEEECTTCEEECTTCB-CCCEEEEEESCEEEEE--T---TE-EEEEECTTCEE
T ss_pred cCeEEECCCCEEEcCCCc-CceEEEEEEEEEEEEE--C---CE-EEEEeCCCCee
Confidence 445678888754333333 6789999999999843 1 33 36789999987
No 240
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=43.47 E-value=38 Score=26.14 Aligned_cols=49 Identities=16% Similarity=0.217 Sum_probs=32.8
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVF 148 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 148 (216)
+....+.+|...----- .+..+.+|.+|++.+...+ .. ....+.+||++
T Consensus 148 ~~~~~~~~g~~i~~~g~-~~~~~y~I~~G~v~v~~~~----~~-~~~~l~~g~~f 196 (246)
T 3of1_A 148 LDTKIYQPGETIIREGD-QGENFYLIEYGAVDVSKKG----QG-VINKLKDHDYF 196 (246)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEECEEEEEETT----TE-EEEEEETTCEE
T ss_pred hheEEeCCCCEEEeCCC-cCCEEEEEEecEEEEEEcC----Cc-eEEEcCCCCcc
Confidence 34566778765432222 3678999999999987632 22 36788999976
No 241
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=43.26 E-value=36 Score=31.42 Aligned_cols=33 Identities=21% Similarity=0.391 Sum_probs=26.4
Q ss_pred eEEEEecCCcEEEEcCCCeEEEEECCCCcEEEE
Q 042226 137 LITKVLQKGDVFVFPIGLVHFQRNVGHGNAFSI 169 (216)
Q Consensus 137 ~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 169 (216)
++..+=++||.+++++|..|+.+|.|-.-.+.+
T Consensus 337 vyr~vQkpGd~Vi~~PgayH~v~n~G~~~n~aw 369 (531)
T 3avr_A 337 VYRFIQRPGDLVWINAGTVHWVQAIGWCNNIAW 369 (531)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSSEEEEEE
T ss_pred eEEEEECCCCEEEECCCceEEEEecceeeeeEE
Confidence 346677999999999999999999996443333
No 242
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=42.90 E-value=6.8 Score=27.75 Aligned_cols=49 Identities=20% Similarity=0.237 Sum_probs=28.0
Q ss_pred EEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEE--EecCCcEE
Q 042226 97 IDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITK--VLQKGDVF 148 (216)
Q Consensus 97 ~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~--~L~~GDv~ 148 (216)
..+++|..+-.- ......+.+|++|++.+. ..+++ .+.... .+.+||++
T Consensus 32 ~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~-~~~~g-~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 32 CLFTEKSYLVRE-GDPVNEMLFIIRGRLESV-TTDGG-RSGFYNRSLLKEGDFC 82 (137)
T ss_dssp CCBCTTEEEECT-TSBCSEEEEEEECCCEEE-CCSSC-SSSSSCEEECCTTCBS
T ss_pred EEeCCCCEEEeC-CCCCCeEEEEEeeEEEEE-EcCCC-cceeeeeeeecCCCEe
Confidence 345555443211 223578999999999964 33321 221223 78899976
No 243
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=39.13 E-value=46 Score=28.15 Aligned_cols=52 Identities=12% Similarity=-0.031 Sum_probs=35.6
Q ss_pred ccEE-EEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEECC--CCcEEEEEE
Q 042226 113 ATEI-LTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHFQRNVG--HGNAFSISA 171 (216)
Q Consensus 113 a~Ei-~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g--~~~a~~l~~ 171 (216)
..|+ ++.+.|++.+.+. ++ ++.|..-|.+++|+|.-....... ..++++...
T Consensus 78 ~rE~~iV~l~G~~~V~vd-----G~--~f~lg~~dalYVp~g~~~v~~as~da~~~a~fav~ 132 (282)
T 1xru_A 78 RRELGVINIGGAGTITVD-----GQ--CYEIGHRDALYVGKGAKEVVFASIDTGTPAKFYYN 132 (282)
T ss_dssp TEEEEEEECSSCEEEEET-----TE--EEEECTTCEEEECTTCCCEEEEESCTTSCCCEEEE
T ss_pred CcEEEEEEccCeEEEEEC-----CE--EEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEEE
Confidence 4676 5566899999873 33 569999999999999864444332 345655543
No 244
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=33.34 E-value=61 Score=28.19 Aligned_cols=54 Identities=11% Similarity=0.141 Sum_probs=33.1
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecC-----CCCceEEEEecCCcEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSN-----PENRLITKVLQKGDVF 148 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~-----~~~~~~~~~L~~GDv~ 148 (216)
+....+.+|..+-.- -..+..+++|++|++.+.....+ .+.......+.+||+|
T Consensus 290 l~~~~~~~Ge~I~~e-Gd~~~~~yiI~sG~v~v~~~~~~~~~~~~g~~~~l~~l~~G~~f 348 (416)
T 3tnp_B 290 IGTKVYNDGEQIIAQ-GDLADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFRGQYF 348 (416)
T ss_dssp CEEEEECTTCEEECT-TSCCCEEEEEEEEEEEEECC------------CEEEEECTTCEE
T ss_pred ceEEEECCCCEEEeC-CCcCCEEEEEEeCEEEEEEecCCcccccCCceeEEEEeCCCCEe
Confidence 455567888654222 22368899999999998765431 0123346788999987
No 245
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=31.71 E-value=1e+02 Score=25.99 Aligned_cols=66 Identities=11% Similarity=0.007 Sum_probs=43.9
Q ss_pred ceEEEEEEEcCCccc-CCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEE-------EEECC
Q 042226 91 GVSLARIDYAPWGVV-PPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLVHF-------QRNVG 162 (216)
Q Consensus 91 gvs~~~~~l~pG~~~-ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~-------~~N~g 162 (216)
|.....+.+.||... ..-.|+ -.|=+|+++|.+. .|+.++-|+|+.|. -.- +
T Consensus 216 G~~TrLlr~~Pg~dt~~v~iHd-y~EEvY~LeG~~d------------------~G~Y~~RPpg~~HGps~~~~ppf~-S 275 (303)
T 2qdr_A 216 GGGVWLLAILPHFDNKYQMIQP-YNEEGYCLTGYCD------------------VGDYRIVKDHYWYCPSFSTLPRHI-T 275 (303)
T ss_dssp SCEEEEEEECSSEECCSEEEEC-SCEEEEEEEEEEE------------------ETTEEEETTEEEEECTTEEECCEE-E
T ss_pred CCeEEEEEECCCCCCCCceeec-cceeEEEEeeecc------------------CceeeEcCCCCccCccccCCCCcC-c
Confidence 455667778888543 334577 4666899998762 26788889999998 443 3
Q ss_pred CCcEEEEEEEeCCC
Q 042226 163 HGNAFSISALSSQN 176 (216)
Q Consensus 163 ~~~a~~l~~~~s~~ 176 (216)
+..+.++.-.+.+.
T Consensus 276 e~G~l~fvR~DgdL 289 (303)
T 2qdr_A 276 DDGGLFFVRVDRDL 289 (303)
T ss_dssp SSCEEEEEEESSCT
T ss_pred CCceEEEEEeCccc
Confidence 56677776555443
No 246
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=31.32 E-value=97 Score=24.63 Aligned_cols=88 Identities=14% Similarity=0.082 Sum_probs=47.1
Q ss_pred cCCcccccccCCCCCccCCCCceEEEeeccCCCCCccCceEEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecC
Q 042226 53 QASHFSFSGLHVAGNTENPLGSRVTPVTVAQIPGLNTLGVSLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSN 132 (216)
Q Consensus 53 ~~~dF~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gvs~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~ 132 (216)
.-+-|.|+|.... ...-.++.++-.|.-.-++--.. .+.++.+. +.. ..+.+. ..-++|+++|++.+...+
T Consensus 87 ~~~p~~F~G~~~v--~a~L~~G~~~DfNlM~rr~~~~~--~v~~~~~~-~~~-~~~~~~-~~~~v~~l~G~~~v~~~~-- 157 (200)
T 1yll_A 87 ARQAFAFSGDSEV--HCTLLDGAIRDFNLIYAPRRHRA--RLQWLRVE-GEL-DWHGTA-STLLLFAQQDGVAISLQG-- 157 (200)
T ss_dssp BTCCEEEETTSCE--EEEESSSCEEEEEEEECTTTEEE--EEEEEEEE-EEE-EEEECC-SEEEEEESSSCEEEEETT--
T ss_pred CCCcEEeCCCCcE--EEEECCCCEEEEEEEEcCCccEE--EEEEEecC-CCe-eEcCCC-CEEEEEEccCcEEEEcCC--
Confidence 4456777774322 11223344665555544442211 22222222 221 111223 467899999999986521
Q ss_pred CCCceEEEEecCCcEEEEcCC
Q 042226 133 PENRLITKVLQKGDVFVFPIG 153 (216)
Q Consensus 133 ~~~~~~~~~L~~GDv~~~P~G 153 (216)
+ ....|.+||.+.+-..
T Consensus 158 --~--~~~~L~~~d~l~~~~~ 174 (200)
T 1yll_A 158 --Q--PRGQLAAHDCLCAEGL 174 (200)
T ss_dssp --E--EEEEECTTCEEEEESC
T ss_pred --C--ceeecCCCCEEEEeCC
Confidence 1 2679999999999654
No 247
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=29.68 E-value=1.1e+02 Score=29.88 Aligned_cols=56 Identities=16% Similarity=0.096 Sum_probs=37.8
Q ss_pred EEEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCC-CCceEEEEecCCcEEE
Q 042226 93 SLARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNP-ENRLITKVLQKGDVFV 149 (216)
Q Consensus 93 s~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~-~~~~~~~~L~~GDv~~ 149 (216)
.+....+++|..+---=.+ ++.+++|++|++.+.+.++.+ +.......+.+||.|-
T Consensus 64 ~m~ye~~~~Ge~IfrqGd~-gd~fYIIlsGsV~V~i~~~~~~~~~~~v~~l~~G~sFG 120 (999)
T 4f7z_A 64 CGYYENLEKGITLFRQGDI-GTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFG 120 (999)
T ss_dssp HCEEEEECTTCEEECTTSC-CCEEEEEEESEEEEEECSSSCTTSCEEEEEEETTCEEC
T ss_pred heEEEEECCCCEEEcCCCc-CCEEEEEEeeEEEEEEecCCCCCCceeEEEecCCcchh
Confidence 4566678888654222244 788999999999998854321 1233467899999873
No 248
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=27.86 E-value=55 Score=27.97 Aligned_cols=48 Identities=13% Similarity=0.144 Sum_probs=34.1
Q ss_pred EEEEEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEE
Q 042226 94 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVF 148 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 148 (216)
+....+++|..+----.+ +..+++|++|++.+... ++ ....+.+||++
T Consensus 153 ~~~~~~~~ge~I~~~Gd~-~~~~yiI~~G~v~v~~~-----~~-~v~~l~~G~~f 200 (381)
T 4din_B 153 MFPVTHIAGETVIQQGNE-GDNFYVVDQGEVDVYVN-----GE-WVTNISEGGSF 200 (381)
T ss_dssp CEEEECCTTCBSSCTTSB-CCEEEECSSSEEEEEET-----TE-EEEEEESSCCB
T ss_pred ceEEEECCCCEEEeCCCC-CCeEEEEEeeEEEEEEC-----Ce-EeeeCCCCCEE
Confidence 556778888765433334 67899999999999752 33 35678999886
No 249
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=27.51 E-value=99 Score=26.69 Aligned_cols=46 Identities=20% Similarity=0.203 Sum_probs=31.9
Q ss_pred EEEcCCcccCCccCCCccEEEEEEeCeEEEEEEecCCCCceEEEEecCCcEE
Q 042226 97 IDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPENRLITKVLQKGDVF 148 (216)
Q Consensus 97 ~~l~pG~~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 148 (216)
..+++|..+-.--.+ +..+++|++|++.+... ++.....+.+||++
T Consensus 364 ~~~~~g~~i~~~G~~-~~~~yiI~~G~v~v~~~-----~~~~~~~l~~G~~f 409 (469)
T 1o7f_A 364 SHAKGGTVLFNQGEE-GTSWYIILKGSVNVVIY-----GKGVVCTLHEGDDF 409 (469)
T ss_dssp EECSTTCEEECTTSC-CCEEEEEEESEEEEEET-----TTEEEEEEETTCEE
T ss_pred eEecCCCEEEeCCCc-CCeEEEEEEeEEEEEEc-----CCeeEEEecCCCEE
Confidence 367788654332233 68899999999998753 22246788999977
No 250
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=25.23 E-value=85 Score=25.45 Aligned_cols=28 Identities=18% Similarity=0.362 Sum_probs=23.0
Q ss_pred ceEEEEecCCcEEEEcCCCeEEEE-ECCC
Q 042226 136 RLITKVLQKGDVFVFPIGLVHFQR-NVGH 163 (216)
Q Consensus 136 ~~~~~~L~~GDv~~~P~G~~H~~~-N~g~ 163 (216)
+.....+++||++++-..++|.-. |.++
T Consensus 226 ~~v~~~~~aGd~~~f~~~~~H~s~~N~s~ 254 (291)
T 2opw_A 226 LFVPTPVQRGALVLIHGEVVHKSKQNLSD 254 (291)
T ss_dssp GCEEECBCTTCEEEEETTCEEEECCBCSS
T ss_pred CeeecccCCCcEEEEcCCceecCCCCCCC
Confidence 345788999999999999999874 6554
No 251
>2dkz_A Hypothetical protein LOC64762; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.26 E-value=48 Score=22.91 Aligned_cols=29 Identities=17% Similarity=0.394 Sum_probs=24.3
Q ss_pred ehhhhcCCCCCCHHHHHHHcCCCHHHHHHHhh
Q 042226 183 ANAVFGSNPAIAADILAKAFQVDKSVVDQLQT 214 (216)
Q Consensus 183 ~~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~ 214 (216)
.-++|-. +++|+|..-|+++.-+++||.+
T Consensus 46 DG~lL~~---L~ee~L~edf~ls~Lq~kKi~~ 74 (84)
T 2dkz_A 46 DGNLLVQ---LTEEILSEDFKLSKLQVKKIMQ 74 (84)
T ss_dssp CHHHHHH---CCHHHHHHTSCCCHHHHHHHHH
T ss_pred chHHHHh---CCHHHHHhhcCCCHHHHHHHHH
Confidence 3456776 9999999999999999998864
No 252
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=22.17 E-value=94 Score=26.86 Aligned_cols=22 Identities=23% Similarity=0.276 Sum_probs=20.1
Q ss_pred EEEEecCCcEEEEcCCCeEEEE
Q 042226 138 ITKVLQKGDVFVFPIGLVHFQR 159 (216)
Q Consensus 138 ~~~~L~~GDv~~~P~G~~H~~~ 159 (216)
....+++||+++|...++|...
T Consensus 234 ~ewd~epGDav~F~~~tlHga~ 255 (344)
T 3nnf_A 234 EEDEYNLGDAFFFNKYVLHQSV 255 (344)
T ss_dssp EECCBCTTCEEEEETTCEEEEC
T ss_pred ccccCCCCcEEEEecceeecCC
Confidence 4678999999999999999987
No 253
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=21.59 E-value=1.1e+02 Score=24.96 Aligned_cols=63 Identities=17% Similarity=0.182 Sum_probs=37.5
Q ss_pred EEEEEEcCCcccCCccCCC------------ccEEEEEEe------CeEEEEEEecCCCCceEEEEecCCcEEEEcCCCe
Q 042226 94 LARIDYAPWGVVPPHVHPR------------ATEILTVIE------GSLEVGFVTSNPENRLITKVLQKGDVFVFPIGLV 155 (216)
Q Consensus 94 ~~~~~l~pG~~~ppH~Hp~------------a~Ei~yVl~------G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~ 155 (216)
+-...+.+|+...+|+-.. .+=++|.-+ |++.+. +. ........++|++++||.+.+
T Consensus 101 ~~~~rY~~G~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~--~~---~~~~~V~P~~G~~v~F~s~~l 175 (243)
T 3dkq_A 101 PLFNRYQGGETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQ--DT---YGQQSIKLSAGSLVLYPSSSL 175 (243)
T ss_dssp EEEEEECTTCEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEE--ET---TEEEEECCCTTCEEEEETTSE
T ss_pred ceEEEECCCCeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEe--eC---CCcEEEecCCCEEEEECCCCe
Confidence 5556789998888886431 111122222 333332 11 112355678999999999999
Q ss_pred EEEEEC
Q 042226 156 HFQRNV 161 (216)
Q Consensus 156 H~~~N~ 161 (216)
|...-+
T Consensus 176 H~v~pV 181 (243)
T 3dkq_A 176 HQVTPV 181 (243)
T ss_dssp EEECCE
T ss_pred EcCccc
Confidence 997443
No 254
>1iyc_A Scarabaecin; antifungal peptide, antimicrobial peptide, beetle, chitin-binding, antifungal protein; NMR {Synthetic} SCOP: g.31.1.2
Probab=20.67 E-value=18 Score=20.33 Aligned_cols=10 Identities=50% Similarity=1.022 Sum_probs=8.0
Q ss_pred eecCcccCCC
Q 042226 40 RVNGFACMDP 49 (216)
Q Consensus 40 ~~~g~~ck~~ 49 (216)
.-||+-||.|
T Consensus 23 vwngfdcksp 32 (36)
T 1iyc_A 23 VWNGFDCKSP 32 (36)
T ss_dssp EEETTEEECG
T ss_pred eecCccccCc
Confidence 4589999976
No 255
>1tc3_C Protein (TC3 transposase); DNA binding, helix-turn-helix, TC1/mariner family, complex (transposase/DNA), DNA binding protein/DNA complex; HET: DNA; 2.45A {Caenorhabditis elegans} SCOP: a.4.1.2
Probab=20.23 E-value=1.1e+02 Score=16.85 Aligned_cols=23 Identities=0% Similarity=0.138 Sum_probs=19.9
Q ss_pred CCHHHHHHHcCCCHHHHHHHhhc
Q 042226 193 IAADILAKAFQVDKSVVDQLQTK 215 (216)
Q Consensus 193 ~p~~vl~~af~~~~~~v~~l~~~ 215 (216)
++..-+++.++++..+|.+..++
T Consensus 22 ~s~~~IA~~lgis~~Tv~~~~~~ 44 (51)
T 1tc3_C 22 VSLHEMSRKISRSRHCIRVYLKD 44 (51)
T ss_dssp CCHHHHHHHHTCCHHHHHHHHHC
T ss_pred CCHHHHHHHHCcCHHHHHHHHhh
Confidence 88888999999999999887554
Done!