BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042231
(124 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P05332|YP20_BACLI Uncharacterized N-acetyltransferase p20 OS=Bacillus licheniformis
GN=p20 PE=4 SV=1
Length = 178
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 6 SRITLRQFKATDVDDFMLWAGDEQVTRSLRWNTFTSGEEA---LTYIKDVCIPHPWRR-S 61
R+TLR+ + D D + D +VT+ + FT +A + I D+ + R S
Sbjct: 7 ERLTLRKMELEDADVLCQYWSDPEVTKYMNITPFTDVSQARDMIQMINDLSLEGQANRFS 66
Query: 62 ICI--YDRSIGFVSIFPGSGDDRCRADIGYAIAVKYWGHGIASKAVK 106
I + D IG F + RA+IGY + +WG G AS+AV+
Sbjct: 67 IIVKETDEVIGTCG-FNMIDQENGRAEIGYDLGRNHWGKGFASEAVQ 112
>sp|O34569|YOAA_BACSU Uncharacterized N-acetyltransferase YoaA OS=Bacillus subtilis
(strain 168) GN=yoaA PE=3 SV=2
Length = 177
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 3 IDLSRITLRQFKATDVDDFMLWAGDEQVTRSLRWNTFTSGEEALTYIKDVCIPHPWRRSI 62
++ R+ LRQ D + +++VTR S E+A++ I+ + +R I
Sbjct: 5 LETDRLILRQITDQDAEAIFACFSNDEVTRYYGLENMESIEQAISMIQTFAALYQEKRGI 64
Query: 63 --CIYDRS----IGFVSIFPGSGDDRCRADIGYAIAVKYWGHGIASKAV 105
I R IG + F RA+IGY I ++W +G AS+ +
Sbjct: 65 RWGIERRDTKELIGTIG-FHALAQKHRRAEIGYEIIPEHWRNGFASEVI 112
>sp|P49855|YKKB_BACSU Uncharacterized protein YkkB OS=Bacillus subtilis (strain 168)
GN=ykkB PE=4 SV=1
Length = 172
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 69 IGFVSIFPGSGDDRCRADIGYAIAVKYWGHGIASKAVKLALNEVFKD 115
+G I P +++ +IGY A ++WG+G A +A + L+ F +
Sbjct: 78 LGQCGIVPQQIENQTVMEIGYMFARRHWGNGYAQEAARACLDYGFNE 124
>sp|Q7VAV8|SURE_PROMA 5'-nucleotidase SurE OS=Prochlorococcus marinus (strain SARG /
CCMP1375 / SS120) GN=surE PE=3 SV=1
Length = 262
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 84 RADIGYAIAVKYWG-HGIASKAVKLALNEVFKDFPDVL 120
RAD + ++ WG G + VKLALNE+ K+ PD++
Sbjct: 59 RADELFNEGIQAWGCSGTPADCVKLALNELLKEKPDLI 96
>sp|P96579|YDAF_BACSU Putative ribosomal N-acetyltransferase YdaF OS=Bacillus subtilis
(strain 168) GN=ydaF PE=1 SV=1
Length = 183
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 13/121 (10%)
Query: 6 SRITLRQFKATDVDDFMLWAGDEQVTRSLRWNTFTSGEEALTYIKDVCIPHPWRRSIC-- 63
IT+R + D + Q R +W F + ++ IP WRR
Sbjct: 8 EHITIRLLEPKDAERLAELIIQNQ-QRLGKWLFFAENPSSADTYRETIIP-DWRRQYADL 65
Query: 64 -------IYDRSI-GFVSIFPGSGDDRCRADIGYAIAVKYWGHGIASKAVKLALNEVFKD 115
+YD S+ G +S+ +R +A+IGY IA ++ G GI + A + + F++
Sbjct: 66 NGIEAGLLYDGSLCGMISLHNLDQVNR-KAEIGYWIAKEFEGKGIITAACRKLITYAFEE 124
Query: 116 F 116
Sbjct: 125 L 125
>sp|O13475|SEC65_KLULA Signal recognition particle SEC65 subunit OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=SEC65 PE=3 SV=2
Length = 270
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 50 KDVCIPHPWRRSICIYDRSIGFVSIFPGS 78
KD+C+ +P ++I RS+G SIF GS
Sbjct: 113 KDLCVENPLAKTIADAARSLGIPSIFEGS 141
>sp|Q3SS04|AMPA_NITWN Probable cytosol aminopeptidase OS=Nitrobacter winogradskyi (strain
Nb-255 / ATCC 25391) GN=pepA PE=3 SV=1
Length = 500
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 14/78 (17%)
Query: 31 TRSLRWNTFTSGEEALTYI-KDVCIPHPWRRSICIYDRSIGFVSIFPGSGDDRCRADIGY 89
T +RWN GE + ++ K VC G +SI P +G + + D+G
Sbjct: 244 TVVMRWNGGKKGEPPVAFVGKGVCF-------------DTGGISIKPANGMEEMKGDMGG 290
Query: 90 AIAVKYWGHGIASKAVKL 107
A V H +A++ K+
Sbjct: 291 AACVVGLMHALAARKAKV 308
>sp|B3Q9R8|AMPA_RHOPT Probable cytosol aminopeptidase OS=Rhodopseudomonas palustris
(strain TIE-1) GN=pepA PE=3 SV=1
Length = 500
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 34 LRWNTFTSGEEALTYI-KDVCIPHPWRRSICIYDRSIGFVSIFPGSGDDRCRADIGYAIA 92
+RWN GE+ L ++ K VC G +SI P + + + D+G A
Sbjct: 247 MRWNGGKKGEQPLAFVGKGVCF-------------DTGGISIKPSASMEDMKGDMGGAAC 293
Query: 93 VKYWGHGIASKAVKL 107
V H +A++ K+
Sbjct: 294 VVGLMHALAARKAKV 308
>sp|Q6N5B9|AMPA_RHOPA Probable cytosol aminopeptidase OS=Rhodopseudomonas palustris
(strain ATCC BAA-98 / CGA009) GN=pepA PE=3 SV=1
Length = 500
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 14/75 (18%)
Query: 34 LRWNTFTSGEEALTYI-KDVCIPHPWRRSICIYDRSIGFVSIFPGSGDDRCRADIGYAIA 92
+RWN GE+ L ++ K VC G +SI P + + + D+G A
Sbjct: 247 MRWNGGKKGEQPLAFVGKGVCF-------------DTGGISIKPSASMEDMKGDMGGAAC 293
Query: 93 VKYWGHGIASKAVKL 107
V H +A++ K+
Sbjct: 294 VVGLMHALAARKAKV 308
>sp|Q03503|NAA30_YEAST N-alpha-acetyltransferase 30 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MAK3 PE=1 SV=1
Length = 176
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 82 RCRADIGY-AIAVKYWGHGIASKAVKLALNEVFKDFPDVLRLQA 124
R R IG A+ Y GHGIA K V++A++++ ++ D + L+
Sbjct: 76 RLRGYIGMLAVESTYRGHGIAKKLVEIAIDKMQREHCDEIMLET 119
>sp|Q46JK0|SURE_PROMT 5'-nucleotidase SurE OS=Prochlorococcus marinus (strain NATL2A)
GN=surE PE=3 SV=1
Length = 262
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 84 RADIGYAIAVKYWG-HGIASKAVKLALNEVFKDFPDVL 120
+AD + +K WG G + VKLALNE+ PD++
Sbjct: 59 KADELFGGGIKAWGCSGTPADCVKLALNELLDQKPDLI 96
>sp|Q215R8|AMPA_RHOPB Probable cytosol aminopeptidase OS=Rhodopseudomonas palustris
(strain BisB18) GN=pepA PE=3 SV=1
Length = 499
Score = 29.6 bits (65), Expect = 6.1, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 16/85 (18%)
Query: 26 GDEQVTRS--LRWNTFTSGEEALTYI-KDVCIPHPWRRSICIYDRSIGFVSIFPGSGDDR 82
G Q R+ +RWN GE+ + ++ K VC G +SI P +
Sbjct: 237 GSTQPGRTVIMRWNGGKKGEQPVAFVGKGVCF-------------DTGGISIKPSGSMED 283
Query: 83 CRADIGYAIAVKYWGHGIASKAVKL 107
+ D+G A V H +A++ K+
Sbjct: 284 MKGDMGGAACVVGLMHALAARKAKI 308
>sp|Q72YJ6|GLGA_BACC1 Glycogen synthase OS=Bacillus cereus (strain ATCC 10987) GN=glgA
PE=3 SV=1
Length = 476
Score = 29.3 bits (64), Expect = 6.5, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 3 IDLSRITLRQFKATDVDDFMLWAGDEQVTRSLRWNTFTSGEEALTYI 49
+DL R R+ DV +L +GD + + W + E+ YI
Sbjct: 308 LDLVRTVFREIMEEDVQCIILGSGDSEYEKFFEWMAYEYPEKVKVYI 354
>sp|P94482|YNAD_BACSU Uncharacterized N-acetyltransferase YnaD OS=Bacillus subtilis
(strain 168) GN=ynaD PE=3 SV=1
Length = 170
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 48/117 (41%), Gaps = 5/117 (4%)
Query: 1 MEIDLSRITLRQFKATDVDDFMLWAGDEQVTRSLRWNTFTSGEEALTYIKDVCIPHPWRR 60
M I R+ +R+F+ D + D V + + FT E+A ++ + +
Sbjct: 1 MHITTKRLLIREFEFKDWQAVYEYTSDSNVMKYIPEGVFTE-EDAKAFVNKNKGDNAEKF 59
Query: 61 SICIYDRS--IGFVSIFPGSGDDRCRADIGYAIAVKYWGHGIASKAVKLALNEVFKD 115
+ + D IG + + G+ +IG+ Y G AS+A + L FK+
Sbjct: 60 PVILRDEDCLIGHIVFYKYFGEHT--YEIGWVFNPNYQNKGYASEAAQAILEYGFKE 114
>sp|O31633|YJCK_BACSU Putative ribosomal-protein-alanine acetyltransferase OS=Bacillus
subtilis (strain 168) GN=yjcK PE=3 SV=1
Length = 181
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 66 DRSIGFVSIFPGSGDDRCRADIGYAIAVKYWGHGIASKAVKLALNEVFKDF 116
DR IG VS+F A IGY + + G GI ++AV+L ++ F +
Sbjct: 75 DRLIGTVSLFQIIRGALQTAFIGYFLDKAHNGKGIMTEAVRLVVDYAFHEL 125
>sp|Q8FN82|PROB_COREF Glutamate 5-kinase OS=Corynebacterium efficiens (strain DSM 44549 /
YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) GN=proB
PE=3 SV=2
Length = 369
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 38 TFTSGEEALTYIKDVCIPHPWRRSICIYDRSIGFVSIFPGSGDDRCRA 85
T S ++A + V + H W RS Y R +G V + G R RA
Sbjct: 73 TDLSMKQAAAAVGQVHLMHQWGRSFARYGRPVGQVLLTAGDAGQRDRA 120
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.140 0.451
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,683,565
Number of Sequences: 539616
Number of extensions: 1696223
Number of successful extensions: 4691
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 4680
Number of HSP's gapped (non-prelim): 17
length of query: 124
length of database: 191,569,459
effective HSP length: 91
effective length of query: 33
effective length of database: 142,464,403
effective search space: 4701325299
effective search space used: 4701325299
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)