Query 042234
Match_columns 658
No_of_seqs 395 out of 2733
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 06:49:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042234.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042234hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3j09_A COPA, copper-exporting 100.0 5.1E-84 1.7E-88 738.3 22.4 502 98-655 3-504 (723)
2 3rfu_A Copper efflux ATPase; a 100.0 1.2E-78 4E-83 689.0 39.8 441 180-652 75-521 (736)
3 3j08_A COPA, copper-exporting 100.0 3.3E-74 1.1E-78 648.6 10.1 421 186-655 6-426 (645)
4 1mhs_A Proton pump, plasma mem 100.0 2.5E-52 8.5E-57 481.7 21.2 331 294-645 140-482 (920)
5 2zxe_A Na, K-ATPase alpha subu 100.0 5.7E-47 1.9E-51 447.9 30.4 255 295-569 134-399 (1028)
6 3b8c_A ATPase 2, plasma membra 100.0 2E-50 7E-55 466.2 -6.4 287 293-601 91-383 (885)
7 3ixz_A Potassium-transporting 100.0 3.1E-45 1.1E-49 433.9 32.2 256 294-569 138-404 (1034)
8 3ar4_A Sarcoplasmic/endoplasmi 100.0 3E-45 1E-49 433.5 27.8 266 294-569 88-370 (995)
9 2hc8_A PACS, cation-transporti 100.0 3.3E-28 1.1E-32 209.3 12.3 111 323-439 2-112 (113)
10 2kij_A Copper-transporting ATP 99.9 3.8E-28 1.3E-32 212.9 8.2 122 317-438 2-123 (124)
11 2ew9_A Copper-transporting ATP 99.8 9.4E-20 3.2E-24 166.8 17.0 143 21-166 3-146 (149)
12 1p6t_A Potential copper-transp 99.8 1.8E-18 6.3E-23 158.6 17.8 139 22-170 6-144 (151)
13 2rop_A Copper-transporting ATP 99.8 1.7E-17 5.8E-22 160.1 17.0 147 20-169 18-191 (202)
14 2kmv_A Copper-transporting ATP 99.7 2.6E-16 8.9E-21 147.7 12.9 97 554-654 1-153 (185)
15 2yj3_A Copper-transporting ATP 99.5 7.1E-18 2.4E-22 169.7 0.0 111 521-641 4-114 (263)
16 2arf_A Wilson disease ATPase; 99.6 6.9E-15 2.3E-19 136.0 9.9 95 556-654 1-134 (165)
17 3a1c_A Probable copper-exporti 99.6 1.3E-14 4.6E-19 147.8 12.5 123 521-653 8-130 (287)
18 1svj_A Potassium-transporting 99.5 5.4E-14 1.8E-18 127.8 9.2 96 552-654 13-121 (156)
19 3skx_A Copper-exporting P-type 99.3 1.6E-11 5.4E-16 124.0 13.3 116 533-654 1-116 (280)
20 3dxs_X Copper-transporting ATP 99.2 5.8E-11 2E-15 94.0 8.3 70 97-169 2-71 (74)
21 3dxs_X Copper-transporting ATP 99.1 1.5E-10 5.1E-15 91.6 9.1 70 21-90 1-70 (74)
22 4a4j_A Pacszia, cation-transpo 99.1 3.1E-10 1E-14 88.3 9.1 66 97-166 2-67 (69)
23 4a4j_A Pacszia, cation-transpo 99.0 7.8E-10 2.7E-14 86.0 9.4 67 22-89 2-68 (69)
24 2ofg_X Zinc-transporting ATPas 99.0 6.5E-10 2.2E-14 95.6 9.1 83 19-108 5-87 (111)
25 3fry_A Probable copper-exporti 99.0 1.3E-09 4.4E-14 85.9 8.1 68 95-170 3-70 (73)
26 1y3j_A Copper-transporting ATP 98.9 1.9E-09 6.4E-14 85.7 8.1 71 96-169 2-72 (77)
27 2g9o_A Copper-transporting ATP 98.9 2.5E-09 8.6E-14 88.1 9.0 74 97-170 3-76 (90)
28 3fry_A Probable copper-exporti 98.9 1.8E-09 6.2E-14 85.0 7.5 67 20-91 3-69 (73)
29 2l3m_A Copper-ION-binding prot 98.9 3.3E-09 1.1E-13 82.6 8.7 64 96-159 4-67 (71)
30 3iwl_A Copper transport protei 98.9 2.6E-09 8.8E-14 82.9 7.9 65 22-91 2-66 (68)
31 1osd_A MERP, hypothetical prot 98.9 3.1E-09 1.1E-13 82.9 8.4 63 97-159 3-65 (72)
32 3cjk_B Copper-transporting ATP 98.9 4.4E-09 1.5E-13 83.0 9.1 68 97-167 2-69 (75)
33 1kvi_A Copper-transporting ATP 98.9 4.2E-09 1.4E-13 84.1 8.7 69 96-167 7-75 (79)
34 1q8l_A Copper-transporting ATP 98.9 5.2E-09 1.8E-13 84.8 9.3 71 96-169 8-78 (84)
35 3iwl_A Copper transport protei 98.9 2.6E-09 8.9E-14 82.8 7.1 65 97-169 2-66 (68)
36 2ew9_A Copper-transporting ATP 98.9 2.7E-09 9.2E-14 96.7 8.2 86 2-89 62-147 (149)
37 1aw0_A Menkes copper-transport 98.9 4.3E-09 1.5E-13 82.1 8.3 67 97-166 3-69 (72)
38 1cpz_A Protein (COPZ); copper 98.9 4.9E-09 1.7E-13 80.7 8.1 60 100-159 3-62 (68)
39 1osd_A MERP, hypothetical prot 98.9 8.2E-09 2.8E-13 80.5 9.4 68 22-89 3-70 (72)
40 2l3m_A Copper-ION-binding prot 98.9 8.6E-09 2.9E-13 80.2 9.5 67 21-87 4-70 (71)
41 2xmw_A PACS-N, cation-transpor 98.9 6.2E-09 2.1E-13 80.9 8.4 66 97-166 3-68 (71)
42 2qif_A Copper chaperone COPZ; 98.9 9.2E-09 3.2E-13 79.0 8.8 62 98-159 3-64 (69)
43 2ldi_A Zinc-transporting ATPas 98.9 1E-08 3.5E-13 79.4 9.1 63 97-159 3-65 (71)
44 3cjk_B Copper-transporting ATP 98.8 1.3E-08 4.5E-13 80.2 9.6 68 23-90 3-70 (75)
45 1p6t_A Potential copper-transp 98.8 4.9E-09 1.7E-13 95.3 8.0 81 2-92 64-144 (151)
46 2g9o_A Copper-transporting ATP 98.8 1E-08 3.5E-13 84.4 8.9 76 23-98 4-82 (90)
47 1q8l_A Copper-transporting ATP 98.8 1.4E-08 4.7E-13 82.3 9.5 71 21-91 8-78 (84)
48 1opz_A Potential copper-transp 98.8 1.3E-08 4.3E-13 80.2 9.0 68 96-166 5-72 (76)
49 1yjr_A Copper-transporting ATP 98.8 7.4E-09 2.5E-13 81.5 7.4 67 97-166 4-70 (75)
50 1kvi_A Copper-transporting ATP 98.8 1.2E-08 4.2E-13 81.3 8.7 70 20-89 6-75 (79)
51 1yg0_A COP associated protein; 98.8 8.5E-09 2.9E-13 78.8 7.4 61 98-159 2-62 (66)
52 1y3j_A Copper-transporting ATP 98.8 7.6E-09 2.6E-13 82.1 7.4 70 21-90 2-71 (77)
53 2qif_A Copper chaperone COPZ; 98.8 1.9E-08 6.6E-13 77.2 9.5 66 22-87 2-67 (69)
54 2xmw_A PACS-N, cation-transpor 98.8 1.6E-08 5.4E-13 78.5 8.8 67 22-89 3-69 (71)
55 2kt2_A Mercuric reductase; nme 98.8 1.2E-08 4E-13 78.9 8.0 63 100-166 3-65 (69)
56 1mwy_A ZNTA; open-faced beta-s 98.8 2E-08 6.9E-13 78.7 9.3 65 97-166 3-67 (73)
57 1mwy_A ZNTA; open-faced beta-s 98.8 2E-08 6.8E-13 78.7 9.2 67 21-89 2-68 (73)
58 1jww_A Potential copper-transp 98.8 1.6E-08 5.3E-13 80.7 8.6 70 97-169 3-72 (80)
59 1opz_A Potential copper-transp 98.8 2.4E-08 8.3E-13 78.5 9.5 69 21-89 5-73 (76)
60 1fvq_A Copper-transporting ATP 98.8 1.5E-08 5.1E-13 78.9 8.1 66 98-167 3-68 (72)
61 1cpz_A Protein (COPZ); copper 98.8 2.2E-08 7.4E-13 77.0 8.9 64 25-88 3-66 (68)
62 2ofg_X Zinc-transporting ATPas 98.8 1.6E-08 5.6E-13 86.7 8.9 65 96-160 7-71 (111)
63 1aw0_A Menkes copper-transport 98.8 1.7E-08 5.8E-13 78.6 8.0 66 23-88 4-69 (72)
64 2ldi_A Zinc-transporting ATPas 98.8 1.8E-08 6.1E-13 78.0 8.1 67 22-88 3-69 (71)
65 2kt2_A Mercuric reductase; nme 98.7 3.1E-08 1.1E-12 76.5 8.3 64 25-89 3-66 (69)
66 1yg0_A COP associated protein; 98.7 3.6E-08 1.2E-12 75.2 8.4 63 24-87 3-65 (66)
67 1jww_A Potential copper-transp 98.7 3.2E-08 1.1E-12 78.9 8.4 71 21-91 2-72 (80)
68 1yjr_A Copper-transporting ATP 98.7 2.9E-08 9.9E-13 78.0 7.5 66 23-88 5-70 (75)
69 1fvq_A Copper-transporting ATP 98.7 4.4E-08 1.5E-12 76.2 8.3 67 23-90 3-69 (72)
70 2kkh_A Putative heavy metal tr 98.7 7.2E-08 2.4E-12 80.0 10.0 73 95-170 14-86 (95)
71 1cc8_A Protein (metallochapero 98.7 7.6E-08 2.6E-12 75.5 9.1 65 21-89 4-69 (73)
72 2kkh_A Putative heavy metal tr 98.7 9.8E-08 3.3E-12 79.2 10.2 73 19-91 13-85 (95)
73 2roe_A Heavy metal binding pro 98.6 4.3E-08 1.5E-12 75.1 6.5 61 100-166 3-63 (66)
74 1cc8_A Protein (metallochapero 98.6 8E-08 2.7E-12 75.4 7.8 64 97-167 5-69 (73)
75 2roe_A Heavy metal binding pro 98.6 4.7E-08 1.6E-12 74.9 6.3 62 25-89 3-64 (66)
76 2kyz_A Heavy metal binding pro 98.6 4.6E-08 1.6E-12 75.2 5.3 56 99-159 3-58 (67)
77 2k2p_A Uncharacterized protein 98.6 8.6E-08 2.9E-12 77.8 6.8 65 20-87 20-84 (85)
78 2kyz_A Heavy metal binding pro 98.6 8.9E-08 3.1E-12 73.6 6.4 62 24-90 3-64 (67)
79 2xmm_A SSR2857 protein, ATX1; 98.6 1.2E-07 4.3E-12 71.6 7.1 61 24-87 3-63 (64)
80 2xmm_A SSR2857 protein, ATX1; 98.5 1.2E-07 4.3E-12 71.6 6.4 58 99-159 3-60 (64)
81 2k2p_A Uncharacterized protein 98.5 9.5E-08 3.2E-12 77.5 5.9 61 96-159 21-81 (85)
82 2rop_A Copper-transporting ATP 98.5 2.5E-07 8.5E-12 88.5 9.5 70 22-91 122-191 (202)
83 2crl_A Copper chaperone for su 98.5 3.2E-07 1.1E-11 76.6 8.7 67 96-169 18-84 (98)
84 2crl_A Copper chaperone for su 98.5 5.5E-07 1.9E-11 75.1 9.7 68 21-92 18-85 (98)
85 2aj0_A Probable cadmium-transp 98.4 5.7E-07 1.9E-11 69.8 6.4 55 98-159 4-58 (71)
86 2aj0_A Probable cadmium-transp 98.3 1.7E-06 5.7E-11 67.1 6.9 60 23-89 4-63 (71)
87 3j09_A COPA, copper-exporting 98.1 6.2E-06 2.1E-10 94.1 9.3 67 24-90 4-70 (723)
88 1qup_A Superoxide dismutase 1 98.0 2.3E-05 7.9E-10 75.4 11.2 68 22-93 6-73 (222)
89 1qup_A Superoxide dismutase 1 98.0 1.3E-05 4.5E-10 77.1 9.0 66 97-169 6-71 (222)
90 1jk9_B CCS, copper chaperone f 97.9 3.9E-05 1.3E-09 75.0 10.1 68 22-93 7-74 (249)
91 1jk9_B CCS, copper chaperone f 97.8 2.8E-05 9.7E-10 76.0 7.6 65 97-168 7-71 (249)
92 4fe3_A Cytosolic 5'-nucleotida 93.8 0.015 5E-07 58.6 1.0 40 526-566 16-64 (297)
93 4gwb_A Peptide methionine sulf 89.0 0.51 1.7E-05 42.3 5.4 50 109-158 9-73 (168)
94 1fvg_A Peptide methionine sulf 85.3 0.82 2.8E-05 42.1 4.6 50 109-158 50-118 (199)
95 1nwa_A Peptide methionine sulf 84.6 1.1 3.7E-05 41.3 5.1 50 109-158 32-96 (203)
96 1ff3_A Peptide methionine sulf 84.5 1 3.5E-05 41.9 4.9 50 109-158 49-117 (211)
97 3bqh_A PILB, peptide methionin 83.1 1 3.5E-05 41.2 4.2 50 109-158 9-77 (193)
98 2j89_A Methionine sulfoxide re 83.0 1.1 3.9E-05 42.5 4.6 50 109-158 101-169 (261)
99 3lvj_C Sulfurtransferase TUSA; 77.1 12 0.00042 28.9 8.2 58 24-91 11-68 (82)
100 3e0m_A Peptide methionine sulf 76.9 2.4 8.1E-05 41.9 4.8 50 109-158 9-75 (313)
101 2z51_A NIFU-like protein 2, ch 73.2 1.1 3.7E-05 39.7 1.2 97 23-129 36-152 (154)
102 3pim_A Peptide methionine sulf 71.5 2.2 7.6E-05 38.8 2.9 50 109-158 26-102 (187)
103 1je3_A EC005, hypothetical 8.6 70.3 13 0.00046 29.8 7.1 58 23-90 27-84 (97)
104 1jdq_A TM006 protein, hypothet 66.8 34 0.0012 27.5 8.8 58 24-91 27-84 (98)
105 2raq_A Conserved protein MTH88 63.3 32 0.0011 27.3 7.5 63 96-159 6-73 (97)
106 2x3d_A SSO6206; unknown functi 62.4 26 0.00088 27.8 6.8 64 96-159 4-72 (96)
107 4gwb_A Peptide methionine sulf 60.7 16 0.00055 32.5 6.2 50 34-83 9-73 (168)
108 3bpd_A Uncharacterized protein 56.3 19 0.00066 28.6 5.2 63 96-159 6-73 (100)
109 3hz7_A Uncharacterized protein 53.0 28 0.00097 27.2 5.9 57 25-91 3-60 (87)
110 1fvg_A Peptide methionine sulf 51.9 25 0.00085 32.3 6.0 49 34-82 50-117 (199)
111 2j89_A Methionine sulfoxide re 48.1 29 0.001 33.0 6.0 50 34-83 101-169 (261)
112 3bqh_A PILB, peptide methionin 47.4 28 0.00096 31.7 5.7 50 34-83 9-77 (193)
113 1pav_A Hypothetical protein TA 46.3 23 0.00078 26.9 4.3 56 25-90 8-63 (78)
114 1nwa_A Peptide methionine sulf 44.6 37 0.0013 31.2 6.0 49 34-82 32-95 (203)
115 1ff3_A Peptide methionine sulf 43.9 39 0.0013 31.2 6.1 49 34-82 49-116 (211)
116 2jmz_A Hypothetical protein MJ 42.4 28 0.00095 31.6 5.0 35 334-374 104-138 (186)
117 3sde_A Paraspeckle component 1 40.3 1.3E+02 0.0043 28.6 9.7 127 24-158 23-157 (261)
118 3e0m_A Peptide methionine sulf 35.2 57 0.0019 32.1 6.0 50 34-83 9-75 (313)
119 3ewi_A N-acylneuraminate cytid 31.6 22 0.00075 31.7 2.3 24 540-563 4-27 (168)
120 3ixz_A Potassium-transporting 31.5 4.4E+02 0.015 30.7 14.1 198 305-524 152-363 (1034)
121 3gwi_A Magnesium-transporting 31.3 25 0.00087 31.4 2.7 41 562-602 3-46 (170)
122 2v50_A Multidrug resistance pr 29.3 1.7E+02 0.0059 34.3 10.1 120 37-157 62-209 (1052)
123 3mn1_A Probable YRBI family ph 28.7 35 0.0012 30.8 3.2 28 536-563 10-37 (189)
124 1th5_A NIFU1; iron-sulfur clus 28.1 47 0.0016 25.1 3.2 51 76-129 16-71 (74)
125 2lcj_A PAB POLC intein; hydrol 27.7 52 0.0018 29.7 4.2 24 349-372 103-126 (185)
126 1jdq_A TM006 protein, hypothet 26.5 1.8E+02 0.0062 23.1 6.7 53 98-160 26-78 (98)
127 2raq_A Conserved protein MTH88 25.8 2.5E+02 0.0085 22.2 7.6 67 21-88 6-77 (97)
128 2y9j_Y Lipoprotein PRGK, prote 25.2 86 0.0029 27.9 5.0 34 112-145 90-138 (170)
129 2k1g_A Lipoprotein SPR; soluti 22.8 80 0.0027 26.9 4.2 22 350-371 61-82 (135)
130 3pim_A Peptide methionine sulf 22.6 60 0.0021 29.4 3.4 49 34-82 26-101 (187)
131 4dx5_A Acriflavine resistance 22.2 3.5E+02 0.012 31.6 11.1 133 24-157 45-209 (1057)
132 2jsx_A Protein NAPD; TAT, proo 22.1 2.3E+02 0.0077 22.4 6.4 14 117-130 61-74 (95)
133 3bpd_A Uncharacterized protein 22.0 1.8E+02 0.0061 23.1 5.5 66 22-88 7-77 (100)
134 3ij5_A 3-deoxy-D-manno-octulos 22.0 60 0.0021 29.9 3.5 25 538-562 42-66 (211)
135 1je3_A EC005, hypothetical 8.6 21.9 2.3E+02 0.0079 22.4 6.5 53 98-160 27-79 (97)
136 3lvj_C Sulfurtransferase TUSA; 21.7 1.9E+02 0.0065 21.9 5.8 52 98-160 10-62 (82)
137 2x3d_A SSO6206; unknown functi 21.3 1.6E+02 0.0055 23.2 5.1 53 36-88 19-76 (96)
138 3mmz_A Putative HAD family hyd 20.8 43 0.0015 29.7 2.2 25 539-563 6-30 (176)
No 1
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=5.1e-84 Score=738.33 Aligned_cols=502 Identities=36% Similarity=0.592 Sum_probs=440.7
Q ss_pred eEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCCCCcceeecCCCCCCccc
Q 042234 98 KIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGSGRFKARIFPEGGGGREN 177 (658)
Q Consensus 98 ~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~~~~~~~~~~~~ 177 (658)
+..+.++||+|++|++.||+.++++|||.++++|+.++++.|+|||...+.+++.+++++.| |++....+......
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~G---y~~~~~~~~~~~~~- 78 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLG---YGVVDEQAAVSAEV- 78 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHC---CEESSCCCCCCCCC-
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcC---Ccccccccccchhh-
Confidence 56899999999999999999999999999999999999999999999999999999999999 66543322111110
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcchhhhhhhhcHHHHHHHHHHHhhhhhcCHHHHHHHHHHHHc
Q 042234 178 LKQEEIKQYYRSFLWSLVFTIPVFLTSMVFMYIPGIKHGLDTKIVNMLTIGEIIRWVLSTPVQFIIGRRFYTGSYKALRH 257 (658)
Q Consensus 178 ~~~~~~~~~~~~~~~~l~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~g~~~~~~a~~~l~~ 257 (658)
.+.+..++++++++++++|++++++. ..+|. . .|+++++++|+++|+|||||++||+++++
T Consensus 79 ---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~--------------~~~~~~l~~~~~~~~g~~~~~~a~~~l~~ 139 (723)
T 3j09_A 79 ---EHLSRMKRKLYVAAFAGVLLLFLAHF-ISLPY-E--------------DFVQLLIALPAIFYSGSSIFKAAFSALRR 139 (723)
T ss_dssp ---CCCCCSCCCSSSTTTTHHHHHHHTTS-SCSSS-S--------------CCSCCSTHHHHHHHHHHHHHHHTCCTTTT
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHH-hccch-H--------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHc
Confidence 11223455677788888888766542 11111 1 24456789999999999999999999999
Q ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHhccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEE
Q 042234 258 GSANLDVLISLGTNAAYFYSMYSVLRAATSPHFEGTDFFETSSMLISFILLGKYLEVLAKGKTSEAIAKLMDLAPETATL 337 (658)
Q Consensus 258 ~~~~~d~l~~~~~~~a~~~s~~~~~~~~~~~~~~~~~y~~~~~~ll~~~~~~~~l~~~~~~k~~~~~~~l~~~~~~~~~v 337 (658)
+++|||+|+++++.+||+||++.++.... ....||++++++++++++++++|.++++|+++.+++|.++.|.+++|
T Consensus 140 ~~~~md~l~~l~~~~a~~~s~~~~~~~~~----~~~~~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v 215 (723)
T 3j09_A 140 RTLNMDVMYSMGVGAAFLASVLSTAGVLP----REYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVV 215 (723)
T ss_dssp CSTTSCSSCSCHHHHHHHHHHHHHHTTTT----CCCCCCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEE
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHhhcc----cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEE
Confidence 99999999999999999999998876421 12349999999999999999999999999999999999999999999
Q ss_pred EeecCCCCceeeEEeeCCCCCCCCEEEEeCCCeeeecEEEEecceeeecccccCCCcceeecCCCeeeeeceecCceEEE
Q 042234 338 LTLDEDGNVISEEEIDSRLIQRNDVIKIIPGAKVASDGYVLWGQSHVNESMITGEARPVAKRKGYTVIGGTVNENGVLHI 417 (658)
Q Consensus 338 ~r~~~~g~~~~~~~i~~~~l~~GDii~v~~ge~iPaD~~vl~g~~~vdes~LtGEs~pv~k~~g~~v~~Gt~~~~g~~~~ 417 (658)
+| ||+ +++|++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|++|+.+|+||++.+|.+.+
T Consensus 216 ~r---~g~---~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~g~~~~ 289 (723)
T 3j09_A 216 IR---DGK---EIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKI 289 (723)
T ss_dssp EE---TTE---EEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEE
T ss_pred EE---CCE---EEEEEHHHCCCCCEEEECCCCEEeeEEEEEECCeEEecccccCCCcceeecCCCeeccceEEecCcEEE
Confidence 98 887 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCcHHHHHHHHHHHHhhcCChhHHHHHhHhhhhhHHHHHHHHHHHHHHHHhhccCCCCCCcCCCchhhHHHHHH
Q 042234 418 KATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQ 497 (658)
Q Consensus 418 ~v~~~g~~T~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (658)
+|+++|.+|.++++.+++++++.+++++++.+++++.+|+|+++++++++++.|++... . ++..++.
T Consensus 290 ~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~-----~--------~~~~~~~ 356 (723)
T 3j09_A 290 RATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAH-----A--------PLLFAFT 356 (723)
T ss_dssp EEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSTT-----C--------TTCCSHH
T ss_pred EEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----C--------cHHHHHH
Confidence 99999999999999999999999999999999999999999999999888877655321 0 2234567
Q ss_pred HHhheeeeeccccccchHHHHHHHHHHHHHhcCeEEecchHhhhhcCCcEEEecCCCcccCCceeEEEEEeccCCCHHHH
Q 042234 498 FGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDF 577 (658)
Q Consensus 498 ~~~~vli~~~P~~l~l~~~~~~~~~~~~~~~~gi~~k~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~ 577 (658)
+++++++++|||+|++++|+++..++.+++++|+++|+++++|.||++|+||||||||||+|+|++.++.+. +.+.+++
T Consensus 357 ~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~-~~~~~~~ 435 (723)
T 3j09_A 357 TLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPL-NGDEREL 435 (723)
T ss_dssp HHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEES-SSCHHHH
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeC-CCCHHHH
Confidence 789999999999999999999999999999999999999999999999999999999999999999999887 4578899
Q ss_pred HHHHHHhhccCCCHHHHHHHHHHHhccCCCCCCCCCCcccceeecCCeEEEEEcCeEEEEcchhhhhhcCCCCChhhh
Q 042234 578 YEVVAATEVNSEHPLAKAIVEYAKKFREDEDNPLWPEAHDFISITGHGVKATVHNKEIMVGNKSLMLDNNIDIPPDAE 655 (658)
Q Consensus 578 ~~~~~~~~~~s~hp~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~g~Gi~~~~~~~~~~iGs~~~~~~~~i~~~~~~~ 655 (658)
+.+++++|++|+||+++|+++++++.+. ......++++++|+|+.+ +.+.+|+++|+++++++.+++..
T Consensus 436 l~~aa~~e~~s~hP~~~Ai~~~a~~~~~-----~~~~~~~~~~~~g~g~~~----~~~~~g~~~~~~~~~~~~~~~~~ 504 (723)
T 3j09_A 436 LRLAAIAERRSEHPIAEAIVKKALEHGI-----ELGEPEKVEVIAGEGVVA----DGILVGNKRLMEDFGVAVSNEVE 504 (723)
T ss_dssp HHHHHHHHTTCCSHHHHHHHHHHHHTTC-----CCCSCCCCEEETTTEEEE----TTEEEECHHHHHHTTCCCCHHHH
T ss_pred HHHHHHHhccCCCchhHHHHHHHHhcCC-----CcCCccceEEecCCceEE----EEEEECCHHHHHhcCCCccHHHH
Confidence 9999999999999999999999987642 234557889999999998 78999999999999998876543
No 2
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=100.00 E-value=1.2e-78 Score=688.97 Aligned_cols=441 Identities=39% Similarity=0.610 Sum_probs=397.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcchhhhhhhhcHHHHHHHHHHHhhhhhcCHHHHHHHHHHHHcCC
Q 042234 180 QEEIKQYYRSFLWSLVFTIPVFLTSMVFMYIPGIKHGLDTKIVNMLTIGEIIRWVLSTPVQFIIGRRFYTGSYKALRHGS 259 (658)
Q Consensus 180 ~~~~~~~~~~~~~~l~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~g~~~~~~a~~~l~~~~ 259 (658)
+.+.+.+++|+++++++++|+|+++|..++++. ++. +....|++++|++|+++|+|||||++||++|++++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------~~~~~~~~~~l~~~v~~~~g~~f~~~a~~~l~~~~ 145 (736)
T 3rfu_A 75 SPEYLDMRRRFWIALMLTIPVVILEMGGHGLKH---FIS------GNGSSWIQLLLATPVVLWGGWPFFKRGWQSLKTGQ 145 (736)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHSCCCTTS---SCS------TTHHHHHHHHHHHHHHHTTTHHHHHHHHHHHTTSC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh---hcc------ccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 446778999999999999999998875433221 111 12347899999999999999999999999999999
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHhccCCC------CCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC
Q 042234 260 ANLDVLISLGTNAAYFYSMYSVLRAATSPH------FEGTDFFETSSMLISFILLGKYLEVLAKGKTSEAIAKLMDLAPE 333 (658)
Q Consensus 260 ~~~d~l~~~~~~~a~~~s~~~~~~~~~~~~------~~~~~y~~~~~~ll~~~~~~~~l~~~~~~k~~~~~~~l~~~~~~ 333 (658)
+|||+|+++|+.+||+||+|.++.....+. ...+.||++++++++++++|+++|.++++|+++.+++|.++.|.
T Consensus 146 ~~md~Lv~l~~~~a~~~S~~~~~~~~~~~~~~~~~~~~~~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~ 225 (736)
T 3rfu_A 146 LNMFTLIAMGIGVAWIYSMVAVLWPGVFPHAFRSQEGVVAVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPE 225 (736)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHCGGGSCSSSSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCC
T ss_pred CChHHHHHHHHHHHHHHHHHHHhcccccccccccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999886432211 12467999999999999999999999999999999999999999
Q ss_pred eEEEEeecCCCCceeeEEeeCCCCCCCCEEEEeCCCeeeecEEEEecceeeecccccCCCcceeecCCCeeeeeceecCc
Q 042234 334 TATLLTLDEDGNVISEEEIDSRLIQRNDVIKIIPGAKVASDGYVLWGQSHVNESMITGEARPVAKRKGYTVIGGTVNENG 413 (658)
Q Consensus 334 ~~~v~r~~~~g~~~~~~~i~~~~l~~GDii~v~~ge~iPaD~~vl~g~~~vdes~LtGEs~pv~k~~g~~v~~Gt~~~~g 413 (658)
+++++| +||+ +++|++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|++|+.+|+||++.+|
T Consensus 226 ~a~vv~--~dg~---~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~~VDES~LTGES~Pv~K~~gd~v~~Gt~~~~G 300 (736)
T 3rfu_A 226 SAHRIK--EDGS---EEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSFVDESMVTGEPIPVAKEASAKVIGATINQTG 300 (736)
T ss_dssp EEEEEE--TTEE---EEEEETTTCCTTCEECCCSSEECCSCEEECSSCEEEECSSSTTCSSCEEECTTCEECTTCEEESC
T ss_pred EEEEEe--cCCE---EEEEEHhhCCCCCEEEECCCCcccccEEEEECceEeeecccCCccccEEeccCCcCCCceEeccc
Confidence 999886 4776 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEecCCcHHHHHHHHHHHHhhcCChhHHHHHhHhhhhhHHHHHHHHHHHHHHHHhhccCCCCCCcCCCchhhHH
Q 042234 414 VLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQ 493 (658)
Q Consensus 414 ~~~~~v~~~g~~T~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (658)
.++++|+++|.+|.++++.+++++++.+|+|+|+.+|+++.+|+|+++++++++++.|++.+.. ..+.
T Consensus 301 ~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~~------------~~~~ 368 (736)
T 3rfu_A 301 SFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGPQ------------PALS 368 (736)
T ss_dssp CCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS------------SSTT
T ss_pred eEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC------------chHH
Confidence 9999999999999999999999999999999999999999999999999999999999876431 0245
Q ss_pred HHHHHHhheeeeeccccccchHHHHHHHHHHHHHhcCeEEecchHhhhhcCCcEEEecCCCcccCCceeEEEEEeccCCC
Q 042234 494 LALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMV 573 (658)
Q Consensus 494 ~~~~~~~~vli~~~P~~l~l~~~~~~~~~~~~~~~~gi~~k~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~ 573 (658)
.++.+++++++++|||+|++++|+++..+..+++++|+++|+++++|.||++|+||||||||||+|+|++.++. .++.+
T Consensus 369 ~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~-~~~~~ 447 (736)
T 3rfu_A 369 YGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIV-TDDFV 447 (736)
T ss_dssp HHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEE-ESSSC
T ss_pred HHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEE-ecCCC
Confidence 67888999999999999999999999999999999999999999999999999999999999999999999998 67788
Q ss_pred HHHHHHHHHHhhccCCCHHHHHHHHHHHhccCCCCCCCCCCcccceeecCCeEEEEEcCeEEEEcchhhhhhcCCCCCh
Q 042234 574 LRDFYEVVAATEVNSEHPLAKAIVEYAKKFREDEDNPLWPEAHDFISITGHGVKATVHNKEIMVGNKSLMLDNNIDIPP 652 (658)
Q Consensus 574 ~~~~~~~~~~~~~~s~hp~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~g~Gi~~~~~~~~~~iGs~~~~~~~~i~~~~ 652 (658)
+++++.+++++|+.|+||+++||++++++.+. ....+.++++.+|+|+.+.++|+++.+|+++|+++.+++.++
T Consensus 448 ~~~~l~~aa~le~~s~hPla~Aiv~~a~~~~~-----~~~~~~~f~~~~g~gv~~~~~g~~~~~G~~~~~~~~~~~~~~ 521 (736)
T 3rfu_A 448 EDNALALAAALEHQSEHPLANAIVHAAKEKGL-----SLGSVEAFEAPTGKGVVGQVDGHHVAIGNARLMQEHGGDNAP 521 (736)
T ss_dssp HHHHHHHHHHHHHSSCCHHHHHHHHHHHTTCC-----CCCCCSCCCCCTTTEEEECSSSSCEEEESHHHHHHHCCCCHH
T ss_pred HHHHHHHHHHHhhcCCChHHHHHHHHHHhcCC-----CccCcccccccCCceEEEEECCEEEEEcCHHHHHHcCCChhH
Confidence 99999999999999999999999999987542 234567899999999999999999999999999999987654
No 3
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=3.3e-74 Score=648.61 Aligned_cols=421 Identities=40% Similarity=0.654 Sum_probs=376.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccccCcchhhhhhhhcHHHHHHHHHHHhhhhhcCHHHHHHHHHHHHcCCCCcchH
Q 042234 186 YYRSFLWSLVFTIPVFLTSMVFMYIPGIKHGLDTKIVNMLTIGEIIRWVLSTPVQFIIGRRFYTGSYKALRHGSANLDVL 265 (658)
Q Consensus 186 ~~~~~~~~l~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~g~~~~~~a~~~l~~~~~~~d~l 265 (658)
+++++++++++++|+++++|. ..+|. . .|+++++++|+++|+|||||++||++++++++|||+|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~-~~~~~-~--------------~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~~~md~L 69 (645)
T 3j08_A 6 MKRKLYVAAFAGVLLLFLAHF-ISLPY-E--------------DFVQLLIALPAIFYSGSSIFKAAFSALRRRTLNMDVM 69 (645)
T ss_dssp SSSSSSSSSCSHHHHHHHTTT-CCSCC-C--------------SSSCCCTHHHHHHHHHHHHHHHTCCTTTTCSGGGCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hhcch-H--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHH
Confidence 455778889999999887662 22221 1 2456778999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeecCCCC
Q 042234 266 ISLGTNAAYFYSMYSVLRAATSPHFEGTDFFETSSMLISFILLGKYLEVLAKGKTSEAIAKLMDLAPETATLLTLDEDGN 345 (658)
Q Consensus 266 ~~~~~~~a~~~s~~~~~~~~~~~~~~~~~y~~~~~~ll~~~~~~~~l~~~~~~k~~~~~~~l~~~~~~~~~v~r~~~~g~ 345 (658)
+++++.+||+||++.++.... .+..||++++++++++++++++|.++++|+++.+++|.++.|.+++|+| ||+
T Consensus 70 ~~l~~~~a~~~s~~~~~~~~~----~~~~~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r---~g~ 142 (645)
T 3j08_A 70 YSMGVGAAFLASVLSTAGVLP----REYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIR---DGK 142 (645)
T ss_dssp CSCHHHHHHHHHHHHHHHHCC----SCSSCCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEE---TTE
T ss_pred HHHHHHHHHHHHHHHHHhhcc----cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE---CCE
Confidence 999999999999999886531 1234999999999999999999999999999999999999999999998 897
Q ss_pred ceeeEEeeCCCCCCCCEEEEeCCCeeeecEEEEecceeeecccccCCCcceeecCCCeeeeeceecCceEEEEEEEecCC
Q 042234 346 VISEEEIDSRLIQRNDVIKIIPGAKVASDGYVLWGQSHVNESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSE 425 (658)
Q Consensus 346 ~~~~~~i~~~~l~~GDii~v~~ge~iPaD~~vl~g~~~vdes~LtGEs~pv~k~~g~~v~~Gt~~~~g~~~~~v~~~g~~ 425 (658)
+++|++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|++|+.+|+||++.+|.+.++|+++|.+
T Consensus 143 ---~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~~VdeS~LTGES~Pv~K~~g~~v~~Gt~~~~g~~~~~v~~~G~~ 219 (645)
T 3j08_A 143 ---EIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGE 219 (645)
T ss_dssp ---EEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGG
T ss_pred ---EEEEEHHHCCCCCEEEECCCCEEeeEEEEEECcEEEEcccccCCCCceecCCCCEeeccEEEecCcEEEEEEEcCCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhcCChhHHHHHhHhhhhhHHHHHHHHHHHHHHHHhhccCCCCCCcCCCchhhHHHHHHHHhheeee
Q 042234 426 SALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVI 505 (658)
Q Consensus 426 T~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vli~ 505 (658)
|.++++.+++++++.+++++++.+|+++.+|+|+++++++++++.|++... . ++..++.++++++++
T Consensus 220 T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~-----~--------~~~~~~~~~i~vlvi 286 (645)
T 3j08_A 220 TLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAH-----A--------PLLFAFTTLIAVLVV 286 (645)
T ss_dssp SHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCS-----C--------SCCCTTTTTHHHHHH
T ss_pred cHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----C--------cHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988877755321 0 112245567899999
Q ss_pred eccccccchHHHHHHHHHHHHHhcCeEEecchHhhhhcCCcEEEecCCCcccCCceeEEEEEeccCCCHHHHHHHHHHhh
Q 042234 506 ACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATE 585 (658)
Q Consensus 506 ~~P~~l~l~~~~~~~~~~~~~~~~gi~~k~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 585 (658)
+|||+|++++|+++..++.+++++|+++|+++++|.||++|++|||||||||+|+|++.++.+. +.+.++++.+++++|
T Consensus 287 a~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~-~~~~~~~l~~aa~~e 365 (645)
T 3j08_A 287 ACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPL-NGDERELLRLAAIAE 365 (645)
T ss_dssp HSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEES-SSCHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeC-CCCHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999887 467889999999999
Q ss_pred ccCCCHHHHHHHHHHHhccCCCCCCCCCCcccceeecCCeEEEEEcCeEEEEcchhhhhhcCCCCChhhh
Q 042234 586 VNSEHPLAKAIVEYAKKFREDEDNPLWPEAHDFISITGHGVKATVHNKEIMVGNKSLMLDNNIDIPPDAE 655 (658)
Q Consensus 586 ~~s~hp~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~g~Gi~~~~~~~~~~iGs~~~~~~~~i~~~~~~~ 655 (658)
++|+||+++|+++++++.+. ......++++++|+|+.+ +.+.+|+++|+++++++.+++..
T Consensus 366 ~~s~hPla~Aiv~~a~~~g~-----~~~~~~~~~~~~g~g~~~----~~v~~g~~~~~~~~~~~~~~~~~ 426 (645)
T 3j08_A 366 RRSEHPIAEAIVKKALEHGI-----ELGEPEKVEVIAGEGVVA----DGILVGNKRLMEDFGVAVSNEVE 426 (645)
T ss_dssp TTCCSHHHHHHHHHHHHTTC-----CCCSCCCCEEETTTEEEE----TTEEEECHHHHHHTTCCCCHHHH
T ss_pred hcCCChhHHHHHHHHHhcCC-----CcCCccceEEecCCceEE----EEEEECCHHHHHhcCCCccHHHH
Confidence 99999999999999987652 234557889999999998 77999999999999998876543
No 4
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=100.00 E-value=2.5e-52 Score=481.70 Aligned_cols=331 Identities=21% Similarity=0.313 Sum_probs=275.7
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeecCCCCceeeEEeeCCCCCCCCEEEEeCCCeeee
Q 042234 294 DFFETSSMLISFILLGKYLEVLAKGKTSEAIAKLMDLAPETATLLTLDEDGNVISEEEIDSRLIQRNDVIKIIPGAKVAS 373 (658)
Q Consensus 294 ~y~~~~~~ll~~~~~~~~l~~~~~~k~~~~~~~l~~~~~~~~~v~r~~~~g~~~~~~~i~~~~l~~GDii~v~~ge~iPa 373 (658)
.|+++ .+++++++++..++.++++|+.+.+++|+++.+.+++|+| ||+ +++|++++|+|||+|.|++||+|||
T Consensus 140 ~~~~~-~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~R---dG~---~~~I~~~eLv~GDiV~l~~Gd~VPa 212 (920)
T 1mhs_A 140 DWVDF-GVICGLLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLR---DGT---LKEIEAPEVVPGDILQVEEGTIIPA 212 (920)
T ss_dssp CSSHH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEEC---SSS---EEECCTTTSCTTSEEEECTTCBCSS
T ss_pred hHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEE---CCE---EEEEEHHHcCCCCEEEeCCCCcccc
Confidence 45554 4556777889999999999999999999999999999998 897 8999999999999999999999999
Q ss_pred cEEEEecce--eeecccccCCCcceeecCCCeeeeeceecCceEEEEEEEecCCcHHHHHHHHHHHHhhcCChhHHHHHh
Q 042234 374 DGYVLWGQS--HVNESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADR 451 (658)
Q Consensus 374 D~~vl~g~~--~vdes~LtGEs~pv~k~~g~~v~~Gt~~~~g~~~~~v~~~g~~T~~~~i~~~~~~~~~~~~~~~~~~~~ 451 (658)
||++++|++ .||||+|||||.|+.|++||.+|+||.+.+|.+.++|++||.+|.+|++.+++++++.+++++++.+++
T Consensus 213 Dg~ll~g~~~l~VDES~LTGES~PV~K~~gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~ 292 (920)
T 1mhs_A 213 DGRIVTDDAFLQVDQSALTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNG 292 (920)
T ss_dssp EEEEEEESSCCEEBCTTTSSCCCCEECCSSCEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHH
T ss_pred ceEEEecCceeeeeccccCCCCcceEecCCCeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHH
Confidence 999999985 999999999999999999999999999999999999999999999999999888888889999999999
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHhhccCCCCCCcCCCchhhHHHHHHHHhheeeeeccccccchHHHHHHHHHHHHHhcCe
Q 042234 452 ISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGV 531 (658)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vli~~~P~~l~l~~~~~~~~~~~~~~~~gi 531 (658)
+..++++++++++++.++.|++.+ .++..++.+++++++++|||+|++++|++++.+..+++++|+
T Consensus 293 i~~~l~~~~~~~~~i~~~~~~~~~--------------~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~i 358 (920)
T 1mhs_A 293 IGTILLILVIFTLLIVWVSSFYRS--------------NPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKA 358 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTTT--------------CCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC--------------CcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCe
Confidence 999988877776655444332111 146778888999999999999999999999999999999999
Q ss_pred EEecchHhhhhcCCcEEEecCCCcccCCceeEEEEEeccCCCHHHHHHHHH-HhhccCC--CHHHHHHHHHHHhccCCCC
Q 042234 532 LIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVA-ATEVNSE--HPLAKAIVEYAKKFREDED 608 (658)
Q Consensus 532 ~~k~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~s~--hp~~~ai~~~~~~~~~~~~ 608 (658)
++|++.++|.||++|+||||||||||+|+|+|.+++..++.+.++++..++ +.+..+. ||+++|+++++++.+....
T Consensus 359 lvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g~~~~~ll~~a~l~~~~~~~~~~P~e~Al~~~~~~~~~~~~ 438 (920)
T 1mhs_A 359 IVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGVDPEDLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKS 438 (920)
T ss_dssp CCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSCCCCTHHHHHHHHSCCCSSCSCCSHHHHHHHHHHHSSSCCG
T ss_pred EEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCCCCHHHHHHHHHHhcCCcccCCChHHHHHHHHHHhcccchh
Confidence 999999999999999999999999999999999988777666566554433 2344566 9999999999876532110
Q ss_pred CCCCCCccccee--ecCCeEEEEEc---CeE--EEEcchhhhhh
Q 042234 609 NPLWPEAHDFIS--ITGHGVKATVH---NKE--IMVGNKSLMLD 645 (658)
Q Consensus 609 ~~~~~~~~~~~~--~~g~Gi~~~~~---~~~--~~iGs~~~~~~ 645 (658)
........+... ..++|+++.++ |+. +..|+++++.+
T Consensus 439 ~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~ 482 (920)
T 1mhs_A 439 VLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLK 482 (920)
T ss_dssp GGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHH
T ss_pred hccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHH
Confidence 001111111111 25899999884 554 44699999854
No 5
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=100.00 E-value=5.7e-47 Score=447.94 Aligned_cols=255 Identities=18% Similarity=0.307 Sum_probs=234.6
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeecCCCCceeeEEeeCCCCCCCCEEEEeCCCeeeec
Q 042234 295 FFETSSMLISFILLGKYLEVLAKGKTSEAIAKLMDLAPETATLLTLDEDGNVISEEEIDSRLIQRNDVIKIIPGAKVASD 374 (658)
Q Consensus 295 y~~~~~~ll~~~~~~~~l~~~~~~k~~~~~~~l~~~~~~~~~v~r~~~~g~~~~~~~i~~~~l~~GDii~v~~ge~iPaD 374 (658)
++..+++++++++++..++.++++|+++.+++|+++.|.+++|+| ||+ +++|++++|+|||+|.|++||+||||
T Consensus 134 ~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~R---dg~---~~~I~~~~Lv~GDiV~l~~Gd~IPaD 207 (1028)
T 2zxe_A 134 NLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIR---DGE---KSTINAEFVVAGDLVEVKGGDRIPAD 207 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEE---TTE---EEEEEGGGCCTTCEEEEETTCBCCSE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEE---CCE---EEEEEHHHCCcCCEEEECCCCEeece
Confidence 444456677788889999999999999999999999999999999 897 88999999999999999999999999
Q ss_pred EEEEecc-eeeecccccCCCcceeecCCC----------eeeeeceecCceEEEEEEEecCCcHHHHHHHHHHHHhhcCC
Q 042234 375 GYVLWGQ-SHVNESMITGEARPVAKRKGY----------TVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKA 443 (658)
Q Consensus 375 ~~vl~g~-~~vdes~LtGEs~pv~k~~g~----------~v~~Gt~~~~g~~~~~v~~~g~~T~~~~i~~~~~~~~~~~~ 443 (658)
|+|++|+ +.||||+|||||.|+.|.+++ .+|+||.+.+|.+.++|++||.+|.+|++.+++.+++.+++
T Consensus 208 ~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t 287 (1028)
T 2zxe_A 208 LRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGRT 287 (1028)
T ss_dssp EEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHHSCCCCC
T ss_pred EEEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHHHhccCCCCCCC
Confidence 9999996 699999999999999999875 59999999999999999999999999999999999999999
Q ss_pred hhHHHHHhHhhhhhHHHHHHHHHHHHHHHHhhccCCCCCCcCCCchhhHHHHHHHHhheeeeeccccccchHHHHHHHHH
Q 042234 444 PVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGT 523 (658)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vli~~~P~~l~l~~~~~~~~~~ 523 (658)
|+++.++++..+++++++++++++++++++.+. ++..++.+++++++++|||+|++++++++..+.
T Consensus 288 ~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~--------------~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~ 353 (1028)
T 2zxe_A 288 PIAIEIEHFIHIITGVAVFLGVSFFILSLILGY--------------SWLEAVIFLIGIIVANVPEGLLATVTVCLTLTA 353 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--------------CHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC--------------cHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHH
Confidence 999999999999999999888887776554321 356778888999999999999999999999999
Q ss_pred HHHHhcCeEEecchHhhhhcCCcEEEecCCCcccCCceeEEEEEec
Q 042234 524 GVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLL 569 (658)
Q Consensus 524 ~~~~~~gi~~k~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~ 569 (658)
.+++++|+++|+++++|.||++|+||||||||||+|+|+|.+++..
T Consensus 354 ~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~ 399 (1028)
T 2zxe_A 354 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFD 399 (1028)
T ss_dssp HHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEET
T ss_pred HHHhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEEC
Confidence 9999999999999999999999999999999999999999998763
No 6
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=100.00 E-value=2e-50 Score=466.22 Aligned_cols=287 Identities=20% Similarity=0.300 Sum_probs=246.8
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeecCCCCceeeEEeeCCCCCCCCEEEEeCCCeee
Q 042234 293 TDFFETSSMLISFILLGKYLEVLAKGKTSEAIAKLMDLAPETATLLTLDEDGNVISEEEIDSRLIQRNDVIKIIPGAKVA 372 (658)
Q Consensus 293 ~~y~~~~~~ll~~~~~~~~l~~~~~~k~~~~~~~l~~~~~~~~~v~r~~~~g~~~~~~~i~~~~l~~GDii~v~~ge~iP 372 (658)
..|+++ ++++++++++.+++.++++|+++.+++|+++.+.+++|+| ||+ +++|++++|+|||+|.|++||+||
T Consensus 91 ~~~~~~-~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~R---dG~---~~~I~~~~Lv~GDiV~l~~Gd~IP 163 (885)
T 3b8c_A 91 PDWQDF-VGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLR---DGK---WSEQEAAILVPGDIVSIKLGDIIP 163 (885)
T ss_dssp SCCTTH-HHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCC---SSC---SCCCCTTTTCTTSBCCCCSSCCCS
T ss_pred ccHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEE---CCE---EEEEEHHHCCCCCEEEECCCCEEe
Confidence 467765 4566777889999999999999999999999999999998 887 789999999999999999999999
Q ss_pred ecEEEEecce-eeecccccCCCcceeecCCCeeeeeceecCceEEEEEEEecCCcHHHHHHHHHHHHhhcCChhHHHHHh
Q 042234 373 SDGYVLWGQS-HVNESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADR 451 (658)
Q Consensus 373 aD~~vl~g~~-~vdes~LtGEs~pv~k~~g~~v~~Gt~~~~g~~~~~v~~~g~~T~~~~i~~~~~~~~~~~~~~~~~~~~ 451 (658)
|||+|++|++ .||||+|||||.|+.|++||.+|+||.+.+|.+.++|++||.+|.+|++.+++++ ..+++++++.+++
T Consensus 164 aDg~ll~g~~l~VdES~LTGES~Pv~K~~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~-~~~~~~lq~~~~~ 242 (885)
T 3b8c_A 164 ADARLLEGDPLKVDQSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTA 242 (885)
T ss_dssp SCCCCCCSSCBCCCCCSTTCCSSCCCBSSCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCS-CSCCSTTTTTTHH
T ss_pred eceEEEEcCcccccccccCCCCcceEecCCCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhc-ccccChHHHHHHH
Confidence 9999999987 8999999999999999999999999999999999999999999999999887766 5678999999999
Q ss_pred HhhhhhHHHH-HHHHHHHHHHHHhhccCCCCCCcCCCchhhHHHHHHHHhheeeeeccccccchHHHHHHHHHHHHHhcC
Q 042234 452 ISKYFVPLVI-ILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQG 530 (658)
Q Consensus 452 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vli~~~P~~l~l~~~~~~~~~~~~~~~~g 530 (658)
+..++++.++ .+++++++.|++.+ . ++..++.+++++++++|||+||+++++++..+..+++++|
T Consensus 243 i~~~~~~~~~~~~~~~~~~~~~~~~------~--------~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ 308 (885)
T 3b8c_A 243 IGNFCICSIAIGMVIEIIVMYPIQR------R--------KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG 308 (885)
T ss_dssp HHHHHHHHHHHHHHHHSTTTTTTTC------S--------CSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcc------C--------cHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCC
Confidence 9887554333 23333322232211 1 2234677889999999999999999999999999999999
Q ss_pred eEEecchHhhhhcCCcEEEecCCCcccCCceeEEEEE--ec-cCCCHHHHHHHHHHhhcc-CCCHHHHHHHHHHH
Q 042234 531 VLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTK--LL-KNMVLRDFYEVVAATEVN-SEHPLAKAIVEYAK 601 (658)
Q Consensus 531 i~~k~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~--~~-~~~~~~~~~~~~~~~~~~-s~hp~~~ai~~~~~ 601 (658)
+++|+++++|.||++|+||||||||||+|+|+|.+.. .. ++.+.++++.+++.++.. +.||+++|+++++.
T Consensus 309 ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~~~~~ 383 (885)
T 3b8c_A 309 AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLA 383 (885)
T ss_dssp CCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCCSSCSSTTHHHHHHHHHHHCCSSSCCSHHHHHHHTTC
T ss_pred eEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEeccCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHhh
Confidence 9999999999999999999999999999999997432 22 345678888888888864 89999999999875
No 7
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=100.00 E-value=3.1e-45 Score=433.87 Aligned_cols=256 Identities=21% Similarity=0.299 Sum_probs=235.6
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeecCCCCceeeEEeeCCCCCCCCEEEEeCCCeeee
Q 042234 294 DFFETSSMLISFILLGKYLEVLAKGKTSEAIAKLMDLAPETATLLTLDEDGNVISEEEIDSRLIQRNDVIKIIPGAKVAS 373 (658)
Q Consensus 294 ~y~~~~~~ll~~~~~~~~l~~~~~~k~~~~~~~l~~~~~~~~~v~r~~~~g~~~~~~~i~~~~l~~GDii~v~~ge~iPa 373 (658)
+++..+++++++++++..++.++++|+.+.+++|+++.+.+++|+| ||+ +++|++++|+|||+|.|++||+|||
T Consensus 138 ~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViR---dG~---~~~I~~~eLv~GDiV~l~~Gd~VPA 211 (1034)
T 3ixz_A 138 DNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIR---DGD---KFQINADQLVVGDLVEMKGGDRVPA 211 (1034)
T ss_pred cchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEE---CCE---EEEEEHHHCCCCcEEEEcCCceecC
Confidence 3444456677788889999999999999999999999999999999 997 8999999999999999999999999
Q ss_pred cEEEEecce-eeecccccCCCcceeecCC----------CeeeeeceecCceEEEEEEEecCCcHHHHHHHHHHHHhhcC
Q 042234 374 DGYVLWGQS-HVNESMITGEARPVAKRKG----------YTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAK 442 (658)
Q Consensus 374 D~~vl~g~~-~vdes~LtGEs~pv~k~~g----------~~v~~Gt~~~~g~~~~~v~~~g~~T~~~~i~~~~~~~~~~~ 442 (658)
||++++|.. .||||+|||||.|+.|.++ |.+|+||.+.+|.+.++|++||.+|.+|++.+++.+.+.++
T Consensus 212 D~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~~~~~~ 291 (1034)
T 3ixz_A 212 DIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEK 291 (1034)
T ss_pred CeEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhHHHHhhcccccCC
Confidence 999999875 9999999999999999764 66999999999999999999999999999999999999999
Q ss_pred ChhHHHHHhHhhhhhHHHHHHHHHHHHHHHHhhccCCCCCCcCCCchhhHHHHHHHHhheeeeeccccccchHHHHHHHH
Q 042234 443 APVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVG 522 (658)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vli~~~P~~l~l~~~~~~~~~ 522 (658)
+|+++.++++..++.++++++++++++++++.+. ++..++.+++++++++|||+|+++++++++.+
T Consensus 292 tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~ 357 (1034)
T 3ixz_A 292 TPIAIEIEHFVDIIAGLAILFGATFFIVAMCIGY--------------TFLRAMVFFMAIVVAYVPEGLLATVTVCLSLT 357 (1034)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------------hHHHHHHHHHHHHHheeccccHHHHHHHHHHH
Confidence 9999999999999998888888877777665432 56778889999999999999999999999999
Q ss_pred HHHHHhcCeEEecchHhhhhcCCcEEEecCCCcccCCceeEEEEEec
Q 042234 523 TGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLL 569 (658)
Q Consensus 523 ~~~~~~~gi~~k~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~ 569 (658)
..+++++|+++|+++++|.||++++||||||||||+|+|+|.+++..
T Consensus 358 ~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~ 404 (1034)
T 3ixz_A 358 AKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFD 404 (1034)
T ss_pred HHHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEEC
Confidence 99999999999999999999999999999999999999999998764
No 8
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=100.00 E-value=3e-45 Score=433.46 Aligned_cols=266 Identities=21% Similarity=0.299 Sum_probs=228.6
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeecCCCCceee-EEeeCCCCCCCCEEEEeCCCeee
Q 042234 294 DFFETSSMLISFILLGKYLEVLAKGKTSEAIAKLMDLAPETATLLTLDEDGNVISE-EEIDSRLIQRNDVIKIIPGAKVA 372 (658)
Q Consensus 294 ~y~~~~~~ll~~~~~~~~l~~~~~~k~~~~~~~l~~~~~~~~~v~r~~~~g~~~~~-~~i~~~~l~~GDii~v~~ge~iP 372 (658)
.|+++++ ++++++++..++.++++|+++.+++|+++.+.+++|+| ||+ .| ++|++++|+|||+|.|++||+||
T Consensus 88 ~~~~~~~-i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~R---~g~--~~~~~I~~~~lv~GDiV~l~~Gd~IP 161 (995)
T 3ar4_A 88 AFVEPFV-ILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYR---ADR--KSVQRIKARDIVPGDIVEVAVGDKVP 161 (995)
T ss_dssp SSHHHHH-HHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEEB---TTC--SSCEEEEGGGCCTTCEEEEETTCBCC
T ss_pred hHHHhHH-hhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEe---CCC--ceEEEEEHHHCCCCCEEEECCCCccc
Confidence 6776544 44566788889999999999999999999999999998 664 23 78999999999999999999999
Q ss_pred ecEEEEec---ceeeecccccCCCcceeecCC-------------CeeeeeceecCceEEEEEEEecCCcHHHHHHHHHH
Q 042234 373 SDGYVLWG---QSHVNESMITGEARPVAKRKG-------------YTVIGGTVNENGVLHIKATRVGSESALAQIVRLVE 436 (658)
Q Consensus 373 aD~~vl~g---~~~vdes~LtGEs~pv~k~~g-------------~~v~~Gt~~~~g~~~~~v~~~g~~T~~~~i~~~~~ 436 (658)
|||+|++| .+.||||+|||||.|+.|+++ |.+|+||.+.+|.++++|++||.+|.+|++.++++
T Consensus 162 aD~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~ 241 (995)
T 3ar4_A 162 ADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMA 241 (995)
T ss_dssp SEEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHH
T ss_pred ccEEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhh
Confidence 99999764 459999999999999999987 69999999999999999999999999999999999
Q ss_pred HHhhcCChhHHHHHhHhhhhhHHHHHHHHHHHHHHHHhhccCCCCCCcCCCchhhHHHHHHHHhheeeeeccccccchHH
Q 042234 437 SAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATP 516 (658)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vli~~~P~~l~l~~~ 516 (658)
+++.+++|+++.+++++.+++++++++++++++++............|+ ..+...+..++++++++|||+|+++++
T Consensus 242 ~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ai~l~v~aiP~~Lp~~vt 317 (995)
T 3ar4_A 242 ATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWI----RGAIYYFKIAVALAVAAIPEGLPAVIT 317 (995)
T ss_dssp TCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHH----HHHHHHHHHHHHHHHHHSCTTHHHHHH
T ss_pred cCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHH----HHHHHHHHHHHHHHHHhcCcchHHHHH
Confidence 9999999999999999999999888777766554432111000011121 123445667889999999999999999
Q ss_pred HHHHHHHHHHHhcCeEEecchHhhhhcCCcEEEecCCCcccCCceeEEEEEec
Q 042234 517 TAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLL 569 (658)
Q Consensus 517 ~~~~~~~~~~~~~gi~~k~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~ 569 (658)
++++.+..+++++|+++|+++++|.||++|+||||||||||+|+|+|.+++..
T Consensus 318 ~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~ 370 (995)
T 3ar4_A 318 TCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFII 370 (995)
T ss_dssp HHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEE
T ss_pred HHHHHHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEec
Confidence 99999999999999999999999999999999999999999999999998754
No 9
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F
Probab=99.95 E-value=3.3e-28 Score=209.34 Aligned_cols=111 Identities=49% Similarity=0.722 Sum_probs=106.0
Q ss_pred HHHHHHccCCCeEEEEeecCCCCceeeEEeeCCCCCCCCEEEEeCCCeeeecEEEEecceeeecccccCCCcceeecCCC
Q 042234 323 AIAKLMDLAPETATLLTLDEDGNVISEEEIDSRLIQRNDVIKIIPGAKVASDGYVLWGQSHVNESMITGEARPVAKRKGY 402 (658)
Q Consensus 323 ~~~~l~~~~~~~~~v~r~~~~g~~~~~~~i~~~~l~~GDii~v~~ge~iPaD~~vl~g~~~vdes~LtGEs~pv~k~~g~ 402 (658)
.+++|.++.|.+++|+| ||+ +++|++++|+|||+|.|++||+|||||++++|.+.||||+|||||.|+.|.+|+
T Consensus 2 al~~L~~l~p~~a~v~r---~g~---~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~~~vdeS~LTGEs~pv~k~~g~ 75 (113)
T 2hc8_A 2 AIKKLVGLQAKTAVVIR---DGK---EIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGD 75 (113)
T ss_dssp HHHHHHHHSCSEEEEEE---TTE---EEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCEEEECHHHHCCSSCEEECTTC
T ss_pred HHHHHhcCCCCEEEEEE---CCE---EEEEEHHHCCCCCEEEECCCCEEeeeEEEEEceEEEEccccCCCCccEEECCCC
Confidence 46778888999999999 887 789999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeceecCceEEEEEEEecCCcHHHHHHHHHHHHh
Q 042234 403 TVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQ 439 (658)
Q Consensus 403 ~v~~Gt~~~~g~~~~~v~~~g~~T~~~~i~~~~~~~~ 439 (658)
.+|+||++.+|.+.++|+++|.+|.++++.+++++++
T Consensus 76 ~v~aGt~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a~ 112 (113)
T 2hc8_A 76 EVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAM 112 (113)
T ss_dssp EECTTCEECSSCEEEEEEECGGGSHHHHHHHHHHHHH
T ss_pred EEEeCCEEeeceEEEEEEEecCcCHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999998765
No 10
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens}
Probab=99.95 E-value=3.8e-28 Score=212.87 Aligned_cols=122 Identities=53% Similarity=0.790 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHccCCCeEEEEeecCCCCceeeEEeeCCCCCCCCEEEEeCCCeeeecEEEEecceeeecccccCCCcce
Q 042234 317 KGKTSEAIAKLMDLAPETATLLTLDEDGNVISEEEIDSRLIQRNDVIKIIPGAKVASDGYVLWGQSHVNESMITGEARPV 396 (658)
Q Consensus 317 ~~k~~~~~~~l~~~~~~~~~v~r~~~~g~~~~~~~i~~~~l~~GDii~v~~ge~iPaD~~vl~g~~~vdes~LtGEs~pv 396 (658)
++|+.+.+++|.++.|.+++|+|..++++...+++|++++|+|||+|.|++||+|||||+|++|.+.||||+|||||.|+
T Consensus 2 ~~ka~~~l~~L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~~vdeS~LTGEs~pv 81 (124)
T 2kij_A 2 SFTMSEALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHSMVDESLITGEAMPV 81 (124)
T ss_dssp ----CCHHHHHHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCCEEECTTTTCCSSCE
T ss_pred hHHHHHHHHHHhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccEEEEeccccCCCccE
Confidence 46788889999999999999998333333222578999999999999999999999999999999999999999999999
Q ss_pred eecCCCeeeeeceecCceEEEEEEEecCCcHHHHHHHHHHHH
Q 042234 397 AKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESA 438 (658)
Q Consensus 397 ~k~~g~~v~~Gt~~~~g~~~~~v~~~g~~T~~~~i~~~~~~~ 438 (658)
.|.+|+.+|+||++.+|.+.++|+++|.+|.+++|.++++++
T Consensus 82 ~k~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 82 AKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp ECCTTEEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred EeCCCCEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999987653
No 11
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.83 E-value=9.4e-20 Score=166.79 Aligned_cols=143 Identities=34% Similarity=0.618 Sum_probs=128.1
Q ss_pred ceEEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCccccccc-CCcceeE
Q 042234 21 TQLCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATLIST-GEDMSKI 99 (658)
Q Consensus 21 ~~~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~-~~~~~~~ 99 (658)
|++..+.|+||+|++|+..+++.+++++|+..+.+|+.++++.+.+++...+.+++.+.+++.||.+..... .....++
T Consensus 3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~~~~~~~~~ 82 (149)
T 2ew9_A 3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVMEDYAGSDGNI 82 (149)
T ss_dssp CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECSCSCCSSSEE
T ss_pred cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEeeccccccccee
Confidence 567789999999999999999999999999999999999999999987667788999999999998754331 1123568
Q ss_pred EEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCCCCccee
Q 042234 100 HLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGSGRFKAR 166 (658)
Q Consensus 100 ~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~ 166 (658)
.|.++||+|++|++.||+.|.+++||.++++|+.++++.|.|+|..++.+++.+.+++.| |.+.
T Consensus 83 ~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G---y~~~ 146 (149)
T 2ew9_A 83 ELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIG---FHAS 146 (149)
T ss_dssp EEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHT---CEEE
T ss_pred EEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCC---CceE
Confidence 899999999999999999999999999999999999999999999889999999999999 6554
No 12
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=99.79 E-value=1.8e-18 Score=158.60 Aligned_cols=139 Identities=27% Similarity=0.538 Sum_probs=125.5
Q ss_pred eEEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCcccccccCCcceeEEE
Q 042234 22 QLCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATLISTGEDMSKIHL 101 (658)
Q Consensus 22 ~~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~~~~~~ 101 (658)
.+..+.|+||+|++|+..+++.+++++|+..+.+++.++++.+.+++...+.+.+.+.+++.||.+. ..++.|
T Consensus 6 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~-------~~~~~~ 78 (151)
T 1p6t_A 6 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVV-------TEKAEF 78 (151)
T ss_dssp EEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEEC-------CEEEEE
T ss_pred eEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCccc-------ccccEE
Confidence 4567999999999999999999999999999999999999999988766678889999999999752 256789
Q ss_pred eeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCCCCcceeecCC
Q 042234 102 QVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGSGRFKARIFPE 170 (658)
Q Consensus 102 ~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~~~~~ 170 (658)
.+.||+|++|++.||+.|.+++||..+.+|+.++++.|.|+|..++.+++.+.+++.| |.+.+..+
T Consensus 79 ~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G---y~~~~~~~ 144 (151)
T 1p6t_A 79 DIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLG---YKLKLKGE 144 (151)
T ss_dssp EESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHT---CCEEESCS
T ss_pred EecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcC---CCeEEcCc
Confidence 9999999999999999999999999999999999999999999999999999999999 76655443
No 13
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=99.75 E-value=1.7e-17 Score=160.12 Aligned_cols=147 Identities=26% Similarity=0.480 Sum_probs=125.0
Q ss_pred cceEEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhc---CCccccccc----
Q 042234 20 STQLCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDT---GFEATLIST---- 92 (658)
Q Consensus 20 ~~~~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~---Gy~~~~~~~---- 92 (658)
.+.+..+.|+||+|++|+..|+++|.+++||..+.+++.++++.+.+++...+.+++.+.++.. ||.+.....
T Consensus 18 ~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~~~gg~~v~~~~~~~~~ 97 (202)
T 2rop_A 18 HVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEALPPGNFKVSLPDGAEGS 97 (202)
T ss_dssp --CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTSSSSCSEEEC-------
T ss_pred ccEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHhccCCeEEEeccccccc
Confidence 3566789999999999999999999999999999999999999999988767888999999988 365421100
Q ss_pred --------------------CCcceeEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHH
Q 042234 93 --------------------GEDMSKIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFM 152 (658)
Q Consensus 93 --------------------~~~~~~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~ 152 (658)
.....++.|.|.||+|++|+..|++.|.+++||..+.+|+.++++.|.|+|..++.+++.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~ 177 (202)
T 2rop_A 98 GTDHRSSSSHSPGSPPRNQVQGTCSTTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELR 177 (202)
T ss_dssp ----------------------CCEEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHH
T ss_pred cccccccccccccccccccccccceEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHH
Confidence 011256789999999999999999999999999999999999999999999988999999
Q ss_pred HHHHhcCCCCcceeecC
Q 042234 153 KVIESTGSGRFKARIFP 169 (658)
Q Consensus 153 ~~i~~~g~~~~~~~~~~ 169 (658)
+.|++.| |.+....
T Consensus 178 ~~i~~~G---y~~~~~~ 191 (202)
T 2rop_A 178 AAIEDMG---FEASVVS 191 (202)
T ss_dssp HHHHHHT---SCEEEC-
T ss_pred HHHHHcC---CceEEcC
Confidence 9999999 6665543
No 14
>2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A*
Probab=99.67 E-value=2.6e-16 Score=147.72 Aligned_cols=97 Identities=31% Similarity=0.505 Sum_probs=84.9
Q ss_pred CcccCCceeEEEEEecc---CCCHHHHHHHHHHhhccCCCHHHHHHHHHHHhc-cCCCCCCCCCCcccceeecCCeEEEE
Q 042234 554 GTLTVGKPVVVSTKLLK---NMVLRDFYEVVAATEVNSEHPLAKAIVEYAKKF-REDEDNPLWPEAHDFISITGHGVKAT 629 (658)
Q Consensus 554 GTLT~~~~~v~~~~~~~---~~~~~~~~~~~~~~~~~s~hp~~~ai~~~~~~~-~~~~~~~~~~~~~~~~~~~g~Gi~~~ 629 (658)
||||+|+|.|.++..+. +.+.++++.+++++|++|+||+++||++++++. +. ..+..+.+|++++|+||+|.
T Consensus 1 GTLT~G~p~V~~v~~~~~~~~~~~~~lL~laaa~E~~SeHPlA~AIv~~a~~~~~~----~~~~~~~~f~~i~G~Gv~~~ 76 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKVLTESNRISHHKILAIVGTAESNSEHPLGTAITKYCKQELDT----ETLGTCIDFQVVPGCGISCK 76 (185)
T ss_dssp CCCCSCCCEEEEEEECSCTTTSCHHHHHHHHHHGGGSSSCHHHHHHHHHHHHHHTC----SCCCCCBCCEEETTTEEEEE
T ss_pred CCCcCCcEEEEEEEecCCcCCCCHHHHHHHHHHHHccCCCHHHHHHHHHHHhhcCC----CCCCCccceEEeccceEEEE
Confidence 89999999999998874 457889999999999999999999999999764 31 12345689999999999999
Q ss_pred EcC----------------------------------------------------eEEEEcchhhhhhcCCCCChhh
Q 042234 630 VHN----------------------------------------------------KEIMVGNKSLMLDNNIDIPPDA 654 (658)
Q Consensus 630 ~~~----------------------------------------------------~~~~iGs~~~~~~~~i~~~~~~ 654 (658)
++| .+|+|||++||+++|++++++.
T Consensus 77 V~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi~i~~~~ 153 (185)
T 2kmv_A 77 VTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSSMIIDAQISNALNAQQYKVLIGNREWMIRNGLVINNDV 153 (185)
T ss_dssp ECCSGGGSSCSSCCCCSCCCCCCCCCCTTTTSCCCCCCCCCCCSTTTTTGGGSCCEEEEEECHHHHHHHTCCCCHHH
T ss_pred ECCccccccccccccccccccccccccccccccccccccccccccccccccCCCceEEEECCHHHHHHcCCCCCHHH
Confidence 998 6999999999999999998754
No 15
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=99.47 E-value=7.1e-18 Score=169.72 Aligned_cols=111 Identities=34% Similarity=0.436 Sum_probs=97.9
Q ss_pred HHHHHHHhcCeEEecchHhhhhcCCcEEEecCCCcccCCceeEEEEEeccCCCHHHHHHHHHHhhccCCCHHHHHHHHHH
Q 042234 521 VGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYA 600 (658)
Q Consensus 521 ~~~~~~~~~gi~~k~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~s~hp~~~ai~~~~ 600 (658)
.++.+++++||++|+++++|.|+++++|+||||||||+|+|.+.++. +.++++.+++++|+.|.||+++|+.+++
T Consensus 4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~-----~~~~~l~~~~~~e~~s~hp~a~ai~~~~ 78 (263)
T 2yj3_A 4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI-----GDSLSLAYAASVEALSSHPIAKAIVKYA 78 (263)
Confidence 46788999999999999999999999999999999999999999874 5678999999999999999999999988
Q ss_pred HhccCCCCCCCCCCcccceeecCCeEEEEEcCeEEEEcchh
Q 042234 601 KKFREDEDNPLWPEAHDFISITGHGVKATVHNKEIMVGNKS 641 (658)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~g~Gi~~~~~~~~~~iGs~~ 641 (658)
++.+. ..+...+++.++|+|+.+.+++..+.+|++.
T Consensus 79 ~~~g~-----~~~~~~~~~~~~G~g~~~~~~~~~~~~G~~~ 114 (263)
T 2yj3_A 79 KEQGV-----KILEVKDFKEISGIGVRGKISDKIIEVKKAE 114 (263)
Confidence 76532 2234577899999999999999999999754
No 16
>2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A
Probab=99.56 E-value=6.9e-15 Score=136.04 Aligned_cols=95 Identities=29% Similarity=0.471 Sum_probs=81.8
Q ss_pred ccCCceeEEEEEeccC---CCHHHHHHHHHHhhccCCCHHHHHHHHHHHhc-cCCCCCCCCCCcccceeecCCeEEEEEc
Q 042234 556 LTVGKPVVVSTKLLKN---MVLRDFYEVVAATEVNSEHPLAKAIVEYAKKF-REDEDNPLWPEAHDFISITGHGVKATVH 631 (658)
Q Consensus 556 LT~~~~~v~~~~~~~~---~~~~~~~~~~~~~~~~s~hp~~~ai~~~~~~~-~~~~~~~~~~~~~~~~~~~g~Gi~~~~~ 631 (658)
||+|+|+|.++..+.+ .+.++++.+++++|++|+||+++||++++++. +. .....+++|++++|+||+|.++
T Consensus 1 LT~G~p~V~~v~~~~~~~~~~~~~lL~laaslE~~SeHPlA~AIv~~a~~~~~~----~~~~~~~~f~~i~G~Gv~a~v~ 76 (165)
T 2arf_A 1 AGHMVPRVMRVLLLGDVATLPLRKVLAVVGTAEASSEHPLGVAVTKYCKEELGT----ETLGYCTDFQAVPGCGIGCKVS 76 (165)
T ss_dssp CCCCCCCEEEEEECCCTTTSCHHHHHHHHHHHHTTSCSTTHHHHHHHHHHHHTC----CCCCCEEEEEEETTTEEEEEEE
T ss_pred CCCceeEEEEEEeeCCcCCCCHHHHHHHHHHHHccCCChHHHHHHHHHHHhcCC----CCCCCcCceEEecCccEEEEEc
Confidence 8999999999987753 57889999999999999999999999999764 21 1124568999999999999999
Q ss_pred Ce-----------------------------------EEEEcchhhhhhcCCCCChhh
Q 042234 632 NK-----------------------------------EIMVGNKSLMLDNNIDIPPDA 654 (658)
Q Consensus 632 ~~-----------------------------------~~~iGs~~~~~~~~i~~~~~~ 654 (658)
|. +|+|||++||+++|+.++++.
T Consensus 77 g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi~~~~~~ 134 (165)
T 2arf_A 77 NVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGLTISSDV 134 (165)
T ss_dssp CHHHHHSCCCCCCCCCCCCSSSSCCCCCCCCCCCCEEEEEEECHHHHHHHHCSSCHHH
T ss_pred CcccccccccccccccccccccccccccccccCCCceEEEEcCHHHHHhcCCCCCHHH
Confidence 86 999999999999999988643
No 17
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=99.56 E-value=1.3e-14 Score=147.83 Aligned_cols=123 Identities=42% Similarity=0.584 Sum_probs=102.9
Q ss_pred HHHHHHHhcCeEEecchHhhhhcCCcEEEecCCCcccCCceeEEEEEeccCCCHHHHHHHHHHhhccCCCHHHHHHHHHH
Q 042234 521 VGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYA 600 (658)
Q Consensus 521 ~~~~~~~~~gi~~k~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~s~hp~~~ai~~~~ 600 (658)
.+.++++++|+++|+++++|.++++++|+||||||||.+.+.+.++...++ +.++++.+++++|+.+.||+++|+.+++
T Consensus 8 ~~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~-~~~~~l~~~~~~e~~s~hp~~~a~~~~~ 86 (287)
T 3a1c_A 8 HGSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG-DERELLRLAAIAERRSEHPIAEAIVKKA 86 (287)
T ss_dssp ------CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS-CHHHHHHHHHHHTTTCCSHHHHHHHHHH
T ss_pred hhHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC-CHHHHHHHHHHHhhcCCCHHHHHHHHHH
Confidence 366789999999999999999999999999999999999999999998888 8899999999999999999999999999
Q ss_pred HhccCCCCCCCCCCcccceeecCCeEEEEEcCeEEEEcchhhhhhcCCCCChh
Q 042234 601 KKFREDEDNPLWPEAHDFISITGHGVKATVHNKEIMVGNKSLMLDNNIDIPPD 653 (658)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~g~Gi~~~~~~~~~~iGs~~~~~~~~i~~~~~ 653 (658)
++.|.. .....++....|.|+.+ ..+.+|+++|+.+.++++|++
T Consensus 87 ~~~g~~-----~~~~~~~~~~~G~~~~~----~~~~~g~~~~~~~~~~~~~~~ 130 (287)
T 3a1c_A 87 LEHGIE-----LGEPEKVEVIAGEGVVA----DGILVGNKRLMEDFGVAVSNE 130 (287)
T ss_dssp HHTTCC-----CCCCSCEEEETTTEEEE----TTEEEECHHHHHHTTCCCCHH
T ss_pred HhcCCC-----ccccccceeecCCCeEE----EEEEECCHHHHHhcCCCccHH
Confidence 876531 22345678889999988 567789999988888877543
No 18
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=99.49 E-value=5.4e-14 Score=127.76 Aligned_cols=96 Identities=16% Similarity=0.173 Sum_probs=76.8
Q ss_pred CCCcccCCceeEEEEEeccCCCHHHHHHHHHHhhccCCCHHHHHHHHHHHhc-cCCCCCCCCCC-------cccceeecC
Q 042234 552 KTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYAKKF-REDEDNPLWPE-------AHDFISITG 623 (658)
Q Consensus 552 KTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~s~hp~~~ai~~~~~~~-~~~~~~~~~~~-------~~~~~~~~g 623 (658)
..||+|-|++++.++.+.++.++++++.+|+++|+.|+||+++||+++|+++ +.. .+. +.+|+.++|
T Consensus 13 ~~~tit~gnr~vt~v~~~~g~~e~elL~lAAs~E~~SeHPla~AIv~~A~~~~~l~-----~~~~~~~~~~~~~F~a~~G 87 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQGVDEKTLADAAQLASLADETPEGRSIVILAKQRFNLR-----ERDVQSLHATFVPFTAQSR 87 (156)
T ss_dssp --------CEEEEEEEECTTSCHHHHHHHHHHTTSSCCSHHHHHHHHHHHHHTTCC-----CCCHHHHTCEEEEEETTTT
T ss_pred CCCceecCCCeEEEEEecCCCCHHHHHHHHHHHhCcCCCHHHHHHHHHHHHhcCCC-----cccccccccceeeccccCC
Confidence 4799999999999999988999999999999999999999999999999876 421 222 367888999
Q ss_pred -CeEEEEEcCeEEEEcc----hhhhhhcCCCCChhh
Q 042234 624 -HGVKATVHNKEIMVGN----KSLMLDNNIDIPPDA 654 (658)
Q Consensus 624 -~Gi~~~~~~~~~~iGs----~~~~~~~~i~~~~~~ 654 (658)
+|+ .++|++|++|| ++||++.|+++|+++
T Consensus 88 ~~Gv--~v~G~~v~vGn~~~i~~l~~~~gi~~~~~~ 121 (156)
T 1svj_A 88 MSGI--NIDNRMIRKGSVDAIRRHVEANGGHFPTDV 121 (156)
T ss_dssp EEEE--EETTEEEEEEEHHHHHHHHHHHTCCCCHHH
T ss_pred CCeE--EECCEEEEEeCcHHHHHHHHHcCCCCcHHH
Confidence 999 57999999999 779999999998654
No 19
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=99.29 E-value=1.6e-11 Score=123.97 Aligned_cols=116 Identities=32% Similarity=0.442 Sum_probs=100.8
Q ss_pred EecchHhhhhcCCcEEEecCCCcccCCceeEEEEEeccCCCHHHHHHHHHHhhccCCCHHHHHHHHHHHhccCCCCCCCC
Q 042234 533 IKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYAKKFREDEDNPLW 612 (658)
Q Consensus 533 ~k~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~s~hp~~~ai~~~~~~~~~~~~~~~~ 612 (658)
+|+++++|.+++++.|+||++||||.|+|++.++...++ +.++++.++++++..+.||+.+++.+++++.+. ..
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~a~~~~~~~~g~-----~~ 74 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH-SEDELLQIAASLEARSEHPIAAAIVEEAEKRGF-----GL 74 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS-CHHHHHHHHHHHHTTCCSHHHHHHHHHHHHTTC-----CC
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC-CHHHHHHHHHHhhccCCCHHHHHHHHHHHhcCC-----CC
Confidence 589999999999999999999999999999999999888 889999999999999999999999999987652 22
Q ss_pred CCcccceeecCCeEEEEEcCeEEEEcchhhhhhcCCCCChhh
Q 042234 613 PEAHDFISITGHGVKATVHNKEIMVGNKSLMLDNNIDIPPDA 654 (658)
Q Consensus 613 ~~~~~~~~~~g~Gi~~~~~~~~~~iGs~~~~~~~~i~~~~~~ 654 (658)
.....+....|.|+.+.+++..+.+|++.++.+.+++.++..
T Consensus 75 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (280)
T 3skx_A 75 TEVEEFRAIPGKGVEGIVNGRRYMVVSPGYIRELGIKTDESV 116 (280)
T ss_dssp CCCEEEEEETTTEEEEEETTEEEEEECHHHHHHTTCCCCTTH
T ss_pred CCccceeecCCCEEEEEECCEEEEEecHHHHHHcCCCchHHH
Confidence 345678889999999999999999999999999988776543
No 20
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.18 E-value=5.8e-11 Score=93.96 Aligned_cols=70 Identities=23% Similarity=0.418 Sum_probs=64.9
Q ss_pred eeEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCCCCcceeecC
Q 042234 97 SKIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGSGRFKARIFP 169 (658)
Q Consensus 97 ~~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~~~~ 169 (658)
.+..|.++||+|++|+..|++.|.+++||.++++|+.++++.|.||+..++.+++.++|++.| |++.+..
T Consensus 2 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G---y~~~~~~ 71 (74)
T 3dxs_X 2 RKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAG---FEAEILA 71 (74)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHT---CEEEEEE
T ss_pred cEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCC---CceEEcc
Confidence 467899999999999999999999999999999999999999999999899999999999999 7766543
No 21
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.14 E-value=1.5e-10 Score=91.57 Aligned_cols=70 Identities=40% Similarity=0.735 Sum_probs=65.0
Q ss_pred ceEEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCccccc
Q 042234 21 TQLCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATLI 90 (658)
Q Consensus 21 ~~~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 90 (658)
|++..+.|+||+|++|+..|+++|++++||.++.+|+.++++.+.+++...+.+++.+.++++||++.+.
T Consensus 1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 70 (74)
T 3dxs_X 1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEIL 70 (74)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEE
T ss_pred CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEc
Confidence 4567899999999999999999999999999999999999999999988778999999999999998654
No 22
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.10 E-value=3.1e-10 Score=88.33 Aligned_cols=66 Identities=27% Similarity=0.533 Sum_probs=61.5
Q ss_pred eeEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCCCCccee
Q 042234 97 SKIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGSGRFKAR 166 (658)
Q Consensus 97 ~~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~ 166 (658)
+++.|.++||+|.+|+..|++.|.+++||.++++|+.++++.|.| +...+.+++.++|++.| |++.
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~-~~~~~~~~i~~~i~~~G---y~~~ 67 (69)
T 4a4j_A 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSY-HGETTPQILTDAVERAG---YHAR 67 (69)
T ss_dssp EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEE-CTTCCHHHHHHHHHHTT---CEEE
T ss_pred CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEE-CCCCCHHHHHHHHHHcC---CceE
Confidence 457899999999999999999999999999999999999999999 77889999999999999 6654
No 23
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.05 E-value=7.8e-10 Score=85.99 Aligned_cols=67 Identities=33% Similarity=0.626 Sum_probs=61.5
Q ss_pred eEEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCcccc
Q 042234 22 QLCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATL 89 (658)
Q Consensus 22 ~~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 89 (658)
++..+.|+||+|++|+..+++++++++||.++.+|+.++++.+.+ +...+++++.+.+++.||.+.+
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~-~~~~~~~~i~~~i~~~Gy~~~~ 68 (69)
T 4a4j_A 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSY-HGETTPQILTDAVERAGYHARV 68 (69)
T ss_dssp EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEE-CTTCCHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEE-CCCCCHHHHHHHHHHcCCceEe
Confidence 356799999999999999999999999999999999999999999 5567899999999999998754
No 24
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=99.03 E-value=6.5e-10 Score=95.58 Aligned_cols=83 Identities=27% Similarity=0.476 Sum_probs=73.5
Q ss_pred CcceEEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCcccccccCCccee
Q 042234 19 KSTQLCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATLISTGEDMSK 98 (658)
Q Consensus 19 ~~~~~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~~~ 98 (658)
+.+.+..+.|+||+|++|+..|+++|++++||..+.+|+.++++.+.+++...+.+++.+.+.++||.+... +
T Consensus 5 ~~~~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~~~Gy~~~~~-------~ 77 (111)
T 2ofg_X 5 SPLKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLAEP-------K 77 (111)
T ss_dssp -CCEEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHHTTTCCEECC-------C
T ss_pred CcceEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHHHcCCeeeec-------c
Confidence 446778899999999999999999999999999999999999999999987677889999999999987542 3
Q ss_pred EEEeeecCcc
Q 042234 99 IHLQVDGIRT 108 (658)
Q Consensus 99 ~~~~v~gm~c 108 (658)
..+.|+||+|
T Consensus 78 ~~l~V~G~~~ 87 (111)
T 2ofg_X 78 SSVTLNGHKH 87 (111)
T ss_dssp CCCCCCCCCC
T ss_pred eeeeccCccC
Confidence 4688999999
No 25
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=98.98 E-value=1.3e-09 Score=85.92 Aligned_cols=68 Identities=21% Similarity=0.403 Sum_probs=61.5
Q ss_pred cceeEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCCCCcceeecCC
Q 042234 95 DMSKIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGSGRFKARIFPE 170 (658)
Q Consensus 95 ~~~~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~~~~~ 170 (658)
...+..|.++||+|++|+..||+.|.+ +||..+.+|+.++++.|.|+ +.+++.++|++.| |.+.+.++
T Consensus 3 ~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~----~~~~i~~~i~~~G---y~~~~~~~ 70 (73)
T 3fry_A 3 SVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE----DVDKYIKAVEAAG---YQAKLRSS 70 (73)
T ss_dssp CCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG----GHHHHHHHHHHTT---CEEEECCS
T ss_pred ccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC----CHHHHHHHHHHcC---CceEecCc
Confidence 346788999999999999999999999 99999999999999999998 6899999999999 77766543
No 26
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=98.95 E-value=1.9e-09 Score=85.71 Aligned_cols=71 Identities=27% Similarity=0.374 Sum_probs=64.4
Q ss_pred ceeEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCCCCcceeecC
Q 042234 96 MSKIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGSGRFKARIFP 169 (658)
Q Consensus 96 ~~~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~~~~ 169 (658)
+.+..|.+.||+|+.|+..|++.|.+++||..+++|+.++++.|.|+|...+.+++.+.+++.| |.+....
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G---y~~~~~~ 72 (77)
T 1y3j_A 2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELG---FGATVIE 72 (77)
T ss_dssp CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHT---SCEEEES
T ss_pred CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcC---CceEECC
Confidence 4567899999999999999999999999999999999999999999998888899999999999 6665543
No 27
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=98.94 E-value=2.5e-09 Score=88.06 Aligned_cols=74 Identities=26% Similarity=0.386 Sum_probs=65.1
Q ss_pred eeEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCCCCcceeecCC
Q 042234 97 SKIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGSGRFKARIFPE 170 (658)
Q Consensus 97 ~~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~~~~~ 170 (658)
.+..|.+.||+|++|++.|++.|.+++||..+++|+.++++.|.|+|..++.+++.+.+++.|++.|.+.+..+
T Consensus 3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~ 76 (90)
T 2g9o_A 3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSE 76 (90)
T ss_dssp EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCC
T ss_pred cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCC
Confidence 45689999999999999999999999999999999999999999999888899999999999322277765544
No 28
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=98.93 E-value=1.8e-09 Score=85.04 Aligned_cols=67 Identities=25% Similarity=0.504 Sum_probs=61.2
Q ss_pred cceEEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCcccccc
Q 042234 20 STQLCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATLIS 91 (658)
Q Consensus 20 ~~~~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 91 (658)
.|.+..+.|+||+|++|+.+|+++|++ +||..+.+|+.++++.+.++ +++++.+.++++||.+.+..
T Consensus 3 ~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~----~~~~i~~~i~~~Gy~~~~~~ 69 (73)
T 3fry_A 3 SVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE----DVDKYIKAVEAAGYQAKLRS 69 (73)
T ss_dssp CCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG----GHHHHHHHHHHTTCEEEECC
T ss_pred ccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC----CHHHHHHHHHHcCCceEecC
Confidence 356788999999999999999999999 99999999999999999987 68899999999999987654
No 29
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=98.93 E-value=3.3e-09 Score=82.58 Aligned_cols=64 Identities=27% Similarity=0.506 Sum_probs=60.6
Q ss_pred ceeEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcC
Q 042234 96 MSKIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTG 159 (658)
Q Consensus 96 ~~~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g 159 (658)
..+..|.+.||+|..|+..|++.|.+++||..+.+|+.++++.|.|+|...+.+++.+.+++.|
T Consensus 4 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G 67 (71)
T 2l3m_A 4 MEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQG 67 (71)
T ss_dssp EEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTT
T ss_pred cEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcC
Confidence 3567899999999999999999999999999999999999999999998888999999999999
No 30
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=98.92 E-value=2.6e-09 Score=82.86 Aligned_cols=65 Identities=20% Similarity=0.450 Sum_probs=58.8
Q ss_pred eEEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCcccccc
Q 042234 22 QLCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATLIS 91 (658)
Q Consensus 22 ~~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 91 (658)
.+..+.| ||+|++|+.+|+++|++++|| ++.+|+.++++.+.++ .+++++.+.++++||.+.+..
T Consensus 2 ~~~~~~v-gm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~---~~~~~i~~~i~~~Gy~~~~~~ 66 (68)
T 3iwl_A 2 PKHEFSV-DMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESE---HSMDTLLATLKKTGKTVSYLG 66 (68)
T ss_dssp CEEEEEE-CCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEES---SCHHHHHHHHHTTCSCEEEEE
T ss_pred ceEEEEE-CcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEec---CCHHHHHHHHHHcCCceEecC
Confidence 4577999 999999999999999999999 9999999999999863 578999999999999986543
No 31
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=98.92 E-value=3.1e-09 Score=82.92 Aligned_cols=63 Identities=14% Similarity=0.314 Sum_probs=60.0
Q ss_pred eeEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcC
Q 042234 97 SKIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTG 159 (658)
Q Consensus 97 ~~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g 159 (658)
.+..|.+.||+|..|+..|++.|.+++||..+++|+.++.+.|.|+|...+.+++.+.+++.|
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G 65 (72)
T 1osd_A 3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAG 65 (72)
T ss_dssp EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTT
T ss_pred eEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcC
Confidence 456899999999999999999999999999999999999999999998888999999999999
No 32
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=98.91 E-value=4.4e-09 Score=82.97 Aligned_cols=68 Identities=26% Similarity=0.539 Sum_probs=62.5
Q ss_pred eeEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCCCCcceee
Q 042234 97 SKIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGSGRFKARI 167 (658)
Q Consensus 97 ~~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~~ 167 (658)
.+..|.++||+|..|+..|++.|.+++||..+++|+.++.+.|.|+|...+.+++.+.+++.| |.+.+
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G---y~~~~ 69 (75)
T 3cjk_B 2 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMG---FDAVI 69 (75)
T ss_dssp EEEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTT---CCEEE
T ss_pred cEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcC---CceEe
Confidence 356799999999999999999999999999999999999999999998888999999999999 65543
No 33
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=98.90 E-value=4.2e-09 Score=84.07 Aligned_cols=69 Identities=26% Similarity=0.539 Sum_probs=63.6
Q ss_pred ceeEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCCCCcceee
Q 042234 96 MSKIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGSGRFKARI 167 (658)
Q Consensus 96 ~~~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~~ 167 (658)
..+..|.+.||+|.+|++.|++.|.+++||..+++|+.++++.|.|++...+.+++.+.+++.| |.+.+
T Consensus 7 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G---y~~~~ 75 (79)
T 1kvi_A 7 VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMG---FDAVI 75 (79)
T ss_dssp CEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHC---CCEEE
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCC---CceEe
Confidence 4677899999999999999999999999999999999999999999998888899999999999 66544
No 34
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=98.90 E-value=5.2e-09 Score=84.82 Aligned_cols=71 Identities=25% Similarity=0.417 Sum_probs=64.5
Q ss_pred ceeEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCCCCcceeecC
Q 042234 96 MSKIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGSGRFKARIFP 169 (658)
Q Consensus 96 ~~~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~~~~ 169 (658)
..++.|.++||+|..|+..|++.|.+++||..+++|+.++++.|.|+|...+.+++.+.+++.| |.+.+..
T Consensus 8 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G---y~~~~~~ 78 (84)
T 1q8l_A 8 EVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMG---FPAFVKK 78 (84)
T ss_dssp CEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTT---CCEECSC
T ss_pred ceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcC---CceEecC
Confidence 3577899999999999999999999999999999999999999999998888999999999999 6665443
No 35
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=98.90 E-value=2.6e-09 Score=82.84 Aligned_cols=65 Identities=17% Similarity=0.255 Sum_probs=58.3
Q ss_pred eeEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCCCCcceeecC
Q 042234 97 SKIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGSGRFKARIFP 169 (658)
Q Consensus 97 ~~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~~~~ 169 (658)
.+..|.+ ||+|.+|+..||++|.+++|| ++++|+.++++.|.++ .+.+++.++|++.| |++.+..
T Consensus 2 ~~~~~~v-gm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~---~~~~~i~~~i~~~G---y~~~~~~ 66 (68)
T 3iwl_A 2 PKHEFSV-DMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESE---HSMDTLLATLKKTG---KTVSYLG 66 (68)
T ss_dssp CEEEEEE-CCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEES---SCHHHHHHHHHTTC---SCEEEEE
T ss_pred ceEEEEE-CcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEec---CCHHHHHHHHHHcC---CceEecC
Confidence 4578999 999999999999999999999 9999999999999973 57899999999999 7766543
No 36
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.89 E-value=2.7e-09 Score=96.71 Aligned_cols=86 Identities=38% Similarity=0.675 Sum_probs=72.6
Q ss_pred cccCCCceeeeccccccCcceEEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHH
Q 042234 2 IEDVGFQATLIQDETSDKSTQLCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIE 81 (658)
Q Consensus 2 i~~~g~~~~~~~~~~~~~~~~~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~ 81 (658)
|+++||++..+... .....+..+.|+||+|++|++.+++++++++||.++.+|+.++++.+.+++...+++++.+.++
T Consensus 62 i~~~G~~~~~~~~~--~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~ 139 (149)
T 2ew9_A 62 IQDLGFEAAVMEDY--AGSDGNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIE 139 (149)
T ss_dssp HHHHTCEEEECSCS--CCSSSEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHH
T ss_pred HhcCCCceEeeccc--ccccceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHH
Confidence 57889988643211 1123457899999999999999999999999999999999999999999987778999999999
Q ss_pred hcCCcccc
Q 042234 82 DTGFEATL 89 (658)
Q Consensus 82 ~~Gy~~~~ 89 (658)
++||.+.+
T Consensus 140 ~~Gy~~~~ 147 (149)
T 2ew9_A 140 EIGFHASL 147 (149)
T ss_dssp HHTCEEEC
T ss_pred hCCCceEe
Confidence 99998654
No 37
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=98.89 E-value=4.3e-09 Score=82.13 Aligned_cols=67 Identities=27% Similarity=0.502 Sum_probs=61.8
Q ss_pred eeEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCCCCccee
Q 042234 97 SKIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGSGRFKAR 166 (658)
Q Consensus 97 ~~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~ 166 (658)
.+..|.+.||+|..|+..|++.+.+++||..+++|+.++++.|.|++...+.+++.+.+++.| |.+.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G---~~~~ 69 (72)
T 1aw0_A 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMG---FDAT 69 (72)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHT---CEEE
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCC---CCcE
Confidence 356799999999999999999999999999999999999999999998888999999999999 6543
No 38
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=98.88 E-value=4.9e-09 Score=80.67 Aligned_cols=60 Identities=18% Similarity=0.375 Sum_probs=57.6
Q ss_pred EEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcC
Q 042234 100 HLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTG 159 (658)
Q Consensus 100 ~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g 159 (658)
.|.++||+|..|+..|++.+.+++||..+++|+.++++.|.|+|...+.+++.+.+++.|
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G 62 (68)
T 1cpz_A 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELG 62 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTS
T ss_pred EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcC
Confidence 578999999999999999999999999999999999999999998888999999999999
No 39
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=98.88 E-value=8.2e-09 Score=80.47 Aligned_cols=68 Identities=31% Similarity=0.590 Sum_probs=62.3
Q ss_pred eEEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCcccc
Q 042234 22 QLCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATL 89 (658)
Q Consensus 22 ~~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 89 (658)
.+..+.++||+|++|+..+++.+++++||.++.+|+..+.+.+.+++...+.+++.+.++++||.+.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 70 (72)
T 1osd_A 3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSV 70 (72)
T ss_dssp EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEE
T ss_pred eEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence 45679999999999999999999999999999999999999999988767889999999999998643
No 40
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=98.88 E-value=8.6e-09 Score=80.16 Aligned_cols=67 Identities=30% Similarity=0.658 Sum_probs=62.0
Q ss_pred ceEEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCcc
Q 042234 21 TQLCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEA 87 (658)
Q Consensus 21 ~~~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~ 87 (658)
|.+..+.++||+|++|+..+++.+++++||..+.+|+.++++.+.+++...+.+++.+.++++||.+
T Consensus 4 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 70 (71)
T 2l3m_A 4 MEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV 70 (71)
T ss_dssp EEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred cEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 5667899999999999999999999999999999999999999999877678899999999999964
No 41
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=98.87 E-value=6.2e-09 Score=80.88 Aligned_cols=66 Identities=29% Similarity=0.577 Sum_probs=58.2
Q ss_pred eeEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCCCCccee
Q 042234 97 SKIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGSGRFKAR 166 (658)
Q Consensus 97 ~~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~ 166 (658)
.+..|.+.||+|+.|+..|++.+.+++||.++.+|+.++++.|.|++. .+.+++.+.+++.| |.+.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~i~~~i~~~G---~~~~ 68 (71)
T 2xmw_A 3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGE-TTPQILTDAVERAG---YHAR 68 (71)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC----CHHHHHHHHHHHT---CEEE
T ss_pred cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCC-CCHHHHHHHHHHcC---CCce
Confidence 456799999999999999999999999999999999999999999987 78899999999999 6543
No 42
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=98.85 E-value=9.2e-09 Score=79.01 Aligned_cols=62 Identities=27% Similarity=0.524 Sum_probs=59.0
Q ss_pred eEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcC
Q 042234 98 KIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTG 159 (658)
Q Consensus 98 ~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g 159 (658)
+..|.++||+|+.|+..|++.|.+++||..+.+|+.++++.|.|+|...+.+.+.+.+++.|
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G 64 (69)
T 2qif_A 3 QKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQG 64 (69)
T ss_dssp EEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTT
T ss_pred EEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcC
Confidence 45789999999999999999999999999999999999999999998888999999999999
No 43
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=98.85 E-value=1e-08 Score=79.40 Aligned_cols=63 Identities=24% Similarity=0.420 Sum_probs=59.5
Q ss_pred eeEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcC
Q 042234 97 SKIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTG 159 (658)
Q Consensus 97 ~~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g 159 (658)
.+..|.+.||+|..|+..|++.|.+++||..+.+|+.++++.|.|++...+.+++.+.+++.|
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G 65 (71)
T 2ldi_A 3 KTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALG 65 (71)
T ss_dssp EEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTT
T ss_pred EEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcC
Confidence 456799999999999999999999999999999999999999999998888899999999999
No 44
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=98.84 E-value=1.3e-08 Score=80.18 Aligned_cols=68 Identities=34% Similarity=0.692 Sum_probs=62.0
Q ss_pred EEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCccccc
Q 042234 23 LCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATLI 90 (658)
Q Consensus 23 ~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 90 (658)
+..+.++||+|++|+..+++.+.+++||..+.+|+.++.+.+.+++...+.+++.+.++++||.+.+.
T Consensus 3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 70 (75)
T 3cjk_B 3 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIH 70 (75)
T ss_dssp EEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEE
T ss_pred EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEee
Confidence 35699999999999999999999999999999999999999999887678899999999999986543
No 45
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.84 E-value=4.9e-09 Score=95.30 Aligned_cols=81 Identities=33% Similarity=0.641 Sum_probs=70.6
Q ss_pred cccCCCceeeeccccccCcceEEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHH
Q 042234 2 IEDVGFQATLIQDETSDKSTQLCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIE 81 (658)
Q Consensus 2 i~~~g~~~~~~~~~~~~~~~~~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~ 81 (658)
++++||++. ..++.+.|+||+|++|++.|++.+++++||..+.+|+.++++.+.+++...+++++.+.++
T Consensus 64 i~~~G~~~~----------~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~ 133 (151)
T 1p6t_A 64 IEKLGYHVV----------TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD 133 (151)
T ss_dssp HHHHTCEEC----------CEEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHH
T ss_pred HHHcCCccc----------ccccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHH
Confidence 456677653 2456799999999999999999999999999999999999999999987788999999999
Q ss_pred hcCCccccccc
Q 042234 82 DTGFEATLIST 92 (658)
Q Consensus 82 ~~Gy~~~~~~~ 92 (658)
++||.+.+...
T Consensus 134 ~~Gy~~~~~~~ 144 (151)
T 1p6t_A 134 KLGYKLKLKGE 144 (151)
T ss_dssp HHTCCEEESCS
T ss_pred HcCCCeEEcCc
Confidence 99998765543
No 46
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=98.83 E-value=1e-08 Score=84.36 Aligned_cols=76 Identities=25% Similarity=0.401 Sum_probs=64.3
Q ss_pred EEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhc---CCcccccccCCccee
Q 042234 23 LCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDT---GFEATLISTGEDMSK 98 (658)
Q Consensus 23 ~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~---Gy~~~~~~~~~~~~~ 98 (658)
+..+.|+||+|++|+..|++++++++||.++.+|+.++++.+.+++...+.+++.+.++++ ||.+.+........|
T Consensus 4 ~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~~~~~~~ 82 (90)
T 2g9o_A 4 TATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSEVEIEGR 82 (90)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCCC-----
T ss_pred EEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCCCccccc
Confidence 4579999999999999999999999999999999999999999988767788999999999 598877665544333
No 47
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=98.83 E-value=1.4e-08 Score=82.27 Aligned_cols=71 Identities=28% Similarity=0.640 Sum_probs=64.3
Q ss_pred ceEEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCcccccc
Q 042234 21 TQLCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATLIS 91 (658)
Q Consensus 21 ~~~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 91 (658)
..+..+.|+||+|++|+..+++.+++++||.++.+|+.++++.+.+++...+.+++.+.++++||.+.+..
T Consensus 8 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 78 (84)
T 1q8l_A 8 EVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKK 78 (84)
T ss_dssp CEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSC
T ss_pred ceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecC
Confidence 35678999999999999999999999999999999999999999998776788999999999999875544
No 48
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=98.83 E-value=1.3e-08 Score=80.22 Aligned_cols=68 Identities=26% Similarity=0.479 Sum_probs=62.6
Q ss_pred ceeEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCCCCccee
Q 042234 96 MSKIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGSGRFKAR 166 (658)
Q Consensus 96 ~~~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~ 166 (658)
..+..|.+.||+|..|+..|++.+.+++||..+.+|+.++.+.|.|+|...+.+++.+.+++.| |.+.
T Consensus 5 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G---~~~~ 72 (76)
T 1opz_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLG---YHVV 72 (76)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHT---CEEE
T ss_pred ceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCC---Ccee
Confidence 3567899999999999999999999999999999999999999999998888999999999999 6543
No 49
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=98.82 E-value=7.4e-09 Score=81.46 Aligned_cols=67 Identities=31% Similarity=0.540 Sum_probs=61.6
Q ss_pred eeEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCCCCccee
Q 042234 97 SKIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGSGRFKAR 166 (658)
Q Consensus 97 ~~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~ 166 (658)
.+..|.+.||+|..|+..|++.+.+++||..+++|+.++.+.|.|+|...+.+++.+.+++.| |.+.
T Consensus 4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G---~~~~ 70 (75)
T 1yjr_A 4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLG---FEPS 70 (75)
T ss_dssp CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHH---CEEE
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcC---CCce
Confidence 456899999999999999999999999999999999999999999998888889999999999 6554
No 50
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=98.82 E-value=1.2e-08 Score=81.28 Aligned_cols=70 Identities=33% Similarity=0.688 Sum_probs=63.6
Q ss_pred cceEEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCcccc
Q 042234 20 STQLCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATL 89 (658)
Q Consensus 20 ~~~~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 89 (658)
...+..+.++||+|++|+..+++.+++++||.++.+|+.++.+.+.+++...+.+++.+.++++||.+.+
T Consensus 6 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 75 (79)
T 1kvi_A 6 GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVI 75 (79)
T ss_dssp TCEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEE
T ss_pred CcEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEe
Confidence 3456789999999999999999999999999999999999999999988767788999999999998654
No 51
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=98.82 E-value=8.5e-09 Score=78.79 Aligned_cols=61 Identities=20% Similarity=0.302 Sum_probs=56.9
Q ss_pred eEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcC
Q 042234 98 KIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTG 159 (658)
Q Consensus 98 ~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g 159 (658)
+..|.++||+|+.|+..|++.|.+++||..+++|+.++++.|.|+|.. +.+++.+.+++.|
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~-~~~~i~~~i~~~G 62 (66)
T 1yg0_A 2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPA-TQDLIKEALLDAG 62 (66)
T ss_dssp EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTC-CHHHHHHHHHHHT
T ss_pred eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCC-CHHHHHHHHHHcC
Confidence 356889999999999999999999999999999999999999999875 7888999999999
No 52
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=98.82 E-value=7.6e-09 Score=82.11 Aligned_cols=70 Identities=36% Similarity=0.677 Sum_probs=63.6
Q ss_pred ceEEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCccccc
Q 042234 21 TQLCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATLI 90 (658)
Q Consensus 21 ~~~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 90 (658)
|++..+.|+||+|++|+..+++.+.+++||..+.+|+.++.+.+.+++...+.+++.+.++++||.+...
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 71 (77)
T 1y3j_A 2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVI 71 (77)
T ss_dssp CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEE
T ss_pred CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEEC
Confidence 4567899999999999999999999999999999999999999999877678889999999999987543
No 53
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=98.81 E-value=1.9e-08 Score=77.16 Aligned_cols=66 Identities=29% Similarity=0.600 Sum_probs=60.6
Q ss_pred eEEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCcc
Q 042234 22 QLCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEA 87 (658)
Q Consensus 22 ~~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~ 87 (658)
.+..+.++||+|++|+..+++.+++++|+.++.+|+..+.+.+.+++...+.+++.+.++++||.+
T Consensus 2 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 67 (69)
T 2qif_A 2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV 67 (69)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence 345799999999999999999999999999999999999999999887678889999999999974
No 54
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=98.81 E-value=1.6e-08 Score=78.52 Aligned_cols=67 Identities=31% Similarity=0.635 Sum_probs=58.8
Q ss_pred eEEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCcccc
Q 042234 22 QLCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATL 89 (658)
Q Consensus 22 ~~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 89 (658)
++..+.++||+|++|+..+++.+++++||.++.+|+.++.+.+.+++. .+.+++.+.++++||.+.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~i~~~i~~~G~~~~~ 69 (71)
T 2xmw_A 3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGE-TTPQILTDAVERAGYHARV 69 (71)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC----CHHHHHHHHHHHTCEEEE
T ss_pred cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCC-CCHHHHHHHHHHcCCCcee
Confidence 346799999999999999999999999999999999999999999866 6788999999999997643
No 55
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=98.81 E-value=1.2e-08 Score=78.94 Aligned_cols=63 Identities=24% Similarity=0.468 Sum_probs=58.3
Q ss_pred EEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCCCCccee
Q 042234 100 HLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGSGRFKAR 166 (658)
Q Consensus 100 ~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~ 166 (658)
.|.++||+|+.|+..|++.|.+++||..+++|+.++++.|.|++. .+.+++.+.+++.| |.+.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~i~~~i~~~G---y~~~ 65 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPG-TSPDALTAAVAGLG---YKAT 65 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTT-SCHHHHHHHHHTTT---SEEE
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCC-CCHHHHHHHHHHCC---CceE
Confidence 478999999999999999999999999999999999999999987 67889999999999 6654
No 56
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=98.80 E-value=2e-08 Score=78.68 Aligned_cols=65 Identities=20% Similarity=0.371 Sum_probs=58.9
Q ss_pred eeEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCCCCccee
Q 042234 97 SKIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGSGRFKAR 166 (658)
Q Consensus 97 ~~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~ 166 (658)
.+..|.+.||+|+.|+..|++.|.+++||..+++|+.++++.|.|++. ..+++.+.+++.| |.+.
T Consensus 3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~--~~~~i~~~i~~~G---y~~~ 67 (73)
T 1mwy_A 3 TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADND--IRAQVESALQKAG---YSLR 67 (73)
T ss_dssp EEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSC--CHHHHHHHHHHHT---CEEE
T ss_pred eEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCC--CHHHHHHHHHHcC---Cccc
Confidence 456899999999999999999999999999999999999999999985 3778899999999 6654
No 57
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=98.80 E-value=2e-08 Score=78.74 Aligned_cols=67 Identities=28% Similarity=0.472 Sum_probs=60.6
Q ss_pred ceEEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCcccc
Q 042234 21 TQLCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATL 89 (658)
Q Consensus 21 ~~~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 89 (658)
|.+..+.++||+|++|+..+++.+++++||..+.+|+.++++.+.+++. ..+++.+.+.++||.+..
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~--~~~~i~~~i~~~Gy~~~~ 68 (73)
T 1mwy_A 2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADND--IRAQVESALQKAGYSLRD 68 (73)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSC--CHHHHHHHHHHHTCEEEE
T ss_pred CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCC--CHHHHHHHHHHcCCcccc
Confidence 5667899999999999999999999999999999999999999999874 378899999999998754
No 58
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=98.79 E-value=1.6e-08 Score=80.74 Aligned_cols=70 Identities=17% Similarity=0.422 Sum_probs=63.5
Q ss_pred eeEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCCCCcceeecC
Q 042234 97 SKIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGSGRFKARIFP 169 (658)
Q Consensus 97 ~~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~~~~ 169 (658)
.+..|.+.||+|..|+..|++.|.+++||..+.+|+.++++.|.|+|...+.+++.+.+++.| |.+...+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G---~~~~~~~ 72 (80)
T 1jww_A 3 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLG---YKLKLKG 72 (80)
T ss_dssp EEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHT---SEEEECC
T ss_pred eEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcC---CeEEecC
Confidence 456799999999999999999999999999999999999999999998888999999999999 7665543
No 59
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=98.79 E-value=2.4e-08 Score=78.54 Aligned_cols=69 Identities=35% Similarity=0.655 Sum_probs=63.0
Q ss_pred ceEEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCcccc
Q 042234 21 TQLCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATL 89 (658)
Q Consensus 21 ~~~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 89 (658)
+.+..+.|+||+|++|+..+++.+.+++||.++.+|+..+.+.+.+++...+.+++.+.+.++||.+..
T Consensus 5 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 73 (76)
T 1opz_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVI 73 (76)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEC
T ss_pred ceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceec
Confidence 566789999999999999999999999999999999999999999987767888999999999997643
No 60
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=98.79 E-value=1.5e-08 Score=78.94 Aligned_cols=66 Identities=23% Similarity=0.426 Sum_probs=60.3
Q ss_pred eEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCCCCcceee
Q 042234 98 KIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGSGRFKARI 167 (658)
Q Consensus 98 ~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~~ 167 (658)
+..|.++||+|..|+..|++.+.+++||.++++|+.++.+.|.|+ ...+.+++.+.+++.| |.+.+
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~-~~~~~~~i~~~i~~~G---~~~~~ 68 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYD-NEVTADSIKEIIEDCG---FDCEI 68 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEEC-TTSCHHHHHHHHHHHT---CCEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEEC-CCCCHHHHHHHHHHCC---CceEE
Confidence 467899999999999999999999999999999999999999999 7678899999999999 66544
No 61
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=98.79 E-value=2.2e-08 Score=76.97 Aligned_cols=64 Identities=33% Similarity=0.646 Sum_probs=59.5
Q ss_pred EEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCccc
Q 042234 25 RIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEAT 88 (658)
Q Consensus 25 ~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 88 (658)
.+.++||+|++|+..+++.+++++|+.++.+|+.++++.+.+++...+.+++.+.+++.||.+.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 66 (68)
T 1cpz_A 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAE 66 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEE
T ss_pred EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence 4889999999999999999999999999999999999999998876788999999999999764
No 62
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=98.79 E-value=1.6e-08 Score=86.71 Aligned_cols=65 Identities=23% Similarity=0.383 Sum_probs=61.2
Q ss_pred ceeEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCC
Q 042234 96 MSKIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGS 160 (658)
Q Consensus 96 ~~~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~ 160 (658)
..+..|.++||+|+.|++.|++.|.+++||..+++|+.++++.|.|+|...+.+++.+.+++.||
T Consensus 7 ~~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~~~Gy 71 (111)
T 2ofg_X 7 LKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGY 71 (111)
T ss_dssp CEEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHHTTTC
T ss_pred ceEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHHHcCC
Confidence 45678999999999999999999999999999999999999999999988888999999999993
No 63
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=98.78 E-value=1.7e-08 Score=78.65 Aligned_cols=66 Identities=41% Similarity=0.749 Sum_probs=60.9
Q ss_pred EEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCccc
Q 042234 23 LCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEAT 88 (658)
Q Consensus 23 ~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 88 (658)
+..+.++||+|++|+..+++.+++++||.++.+|+.++++.+.+++...+.+++.+.++++||.+.
T Consensus 4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 69 (72)
T 1aw0_A 4 ETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDAT 69 (72)
T ss_dssp EEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcE
Confidence 467999999999999999999999999999999999999999998776778899999999999764
No 64
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=98.77 E-value=1.8e-08 Score=77.99 Aligned_cols=67 Identities=30% Similarity=0.587 Sum_probs=60.9
Q ss_pred eEEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCccc
Q 042234 22 QLCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEAT 88 (658)
Q Consensus 22 ~~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 88 (658)
.+..+.++||+|++|+..+++.+++++|+..+.+|+.++++.+.+++...+.+++.+.++++||.+.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 69 (71)
T 2ldi_A 3 KTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLA 69 (71)
T ss_dssp EEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEEE
T ss_pred EEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence 4567999999999999999999999999999999999999999998766778889999999999753
No 65
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=98.74 E-value=3.1e-08 Score=76.48 Aligned_cols=64 Identities=34% Similarity=0.641 Sum_probs=59.0
Q ss_pred EEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCcccc
Q 042234 25 RIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATL 89 (658)
Q Consensus 25 ~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 89 (658)
.+.++||+|++|+..+++++++++||.++.+|+.++++.+.+++. .+.+++.+.++++||.+.+
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~i~~~i~~~Gy~~~~ 66 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPG-TSPDALTAAVAGLGYKATL 66 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTT-SCHHHHHHHHHTTTSEEEC
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCC-CCHHHHHHHHHHCCCceEe
Confidence 488999999999999999999999999999999999999999876 5789999999999998654
No 66
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=98.73 E-value=3.6e-08 Score=75.19 Aligned_cols=63 Identities=25% Similarity=0.467 Sum_probs=58.0
Q ss_pred EEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCcc
Q 042234 24 CRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEA 87 (658)
Q Consensus 24 ~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~ 87 (658)
..+.++||+|++|+..+++.+++++|+..+.+|+.++++.+.+++.. +.+++.+.++++||.+
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~-~~~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 3 ATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPA-TQDLIKEALLDAGQEV 65 (66)
T ss_dssp EEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTC-CHHHHHHHHHHHTCCC
T ss_pred EEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCC-CHHHHHHHHHHcCCCc
Confidence 46889999999999999999999999999999999999999998764 7889999999999964
No 67
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=98.73 E-value=3.2e-08 Score=78.86 Aligned_cols=71 Identities=34% Similarity=0.624 Sum_probs=63.4
Q ss_pred ceEEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCcccccc
Q 042234 21 TQLCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATLIS 91 (658)
Q Consensus 21 ~~~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 91 (658)
|.+..+.++||+|++|+..+++.+++++|+..+.+|+.++.+.+.+++...+.+++.+.+.++||.+....
T Consensus 2 m~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~ 72 (80)
T 1jww_A 2 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKG 72 (80)
T ss_dssp CEEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEECC
T ss_pred ceEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEecC
Confidence 34567999999999999999999999999999999999999999998776788899999999999875543
No 68
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=98.71 E-value=2.9e-08 Score=77.97 Aligned_cols=66 Identities=36% Similarity=0.690 Sum_probs=60.2
Q ss_pred EEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCccc
Q 042234 23 LCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEAT 88 (658)
Q Consensus 23 ~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 88 (658)
+..+.++||+|++|+..+++.+.+++|+.++.+|+.++.+.+.+++...+.+++.+.+.++||.+.
T Consensus 5 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 70 (75)
T 1yjr_A 5 VLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPS 70 (75)
T ss_dssp CEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEE
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCce
Confidence 457999999999999999999999999999999999999999998776667889999999999764
No 69
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=98.70 E-value=4.4e-08 Score=76.24 Aligned_cols=67 Identities=31% Similarity=0.673 Sum_probs=60.6
Q ss_pred EEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCccccc
Q 042234 23 LCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATLI 90 (658)
Q Consensus 23 ~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 90 (658)
+..+.++||+|++|+..+++.+.+++||.++.+|+.++.+.+.++ ...+.+++.+.+++.||.+.+.
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~-~~~~~~~i~~~i~~~G~~~~~~ 69 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYD-NEVTADSIKEIIEDCGFDCEIL 69 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEEC-TTSCHHHHHHHHHHHTCCEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEEC-CCCCHHHHHHHHHHCCCceEEc
Confidence 356899999999999999999999999999999999999999998 5577889999999999986543
No 70
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=98.70 E-value=7.2e-08 Score=80.05 Aligned_cols=73 Identities=21% Similarity=0.278 Sum_probs=65.2
Q ss_pred cceeEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCCCCcceeecCC
Q 042234 95 DMSKIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGSGRFKARIFPE 170 (658)
Q Consensus 95 ~~~~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~~~~~ 170 (658)
...+..|.+.||+|+.|+..|++.+..++||..+.+|+.++.+.|.|++..++.+.+.+.++..| |.+.....
T Consensus 14 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G---y~~~~~~~ 86 (95)
T 2kkh_A 14 KLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEAR---LEANVRVN 86 (95)
T ss_dssp CSEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHT---CCEEESCC
T ss_pred ceEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcC---CceEEecC
Confidence 34577899999999999999999999999999999999999999999998888899999999999 66654433
No 71
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=98.68 E-value=7.6e-08 Score=75.52 Aligned_cols=65 Identities=29% Similarity=0.498 Sum_probs=58.6
Q ss_pred ceEEEEEecCCCChhhHHHHHHHHhCCC-CceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCcccc
Q 042234 21 TQLCRIGINGMTCTTCSTTVEKALQAIP-GVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATL 89 (658)
Q Consensus 21 ~~~~~~~i~gm~C~~C~~~ve~~l~~~~-gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 89 (658)
+.+..+.++ |+|++|+..++++|++++ ||.++.+|+.++++.+.++ .+.+++.+.++++||.+..
T Consensus 4 m~~~~~~v~-m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~---~~~~~i~~~i~~~Gy~~~~ 69 (73)
T 1cc8_A 4 IKHYQFNVV-MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTT---LPYDFILEKIKKTGKEVRS 69 (73)
T ss_dssp CEEEEEEEC-CCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEES---SCHHHHHHHHHTTSSCEEE
T ss_pred ceEEEEEEe-eECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEe---CCHHHHHHHHHHhCCCcee
Confidence 356779999 999999999999999999 9999999999999999863 5688999999999998754
No 72
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=98.68 E-value=9.8e-08 Score=79.21 Aligned_cols=73 Identities=23% Similarity=0.347 Sum_probs=65.0
Q ss_pred CcceEEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCcccccc
Q 042234 19 KSTQLCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATLIS 91 (658)
Q Consensus 19 ~~~~~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 91 (658)
..|.+..+.|+||+|++|+..+++.+.+++||..+.+|+..+.+.+.+++...+.+.+.+.+..+||.+....
T Consensus 13 ~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 85 (95)
T 2kkh_A 13 KKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRV 85 (95)
T ss_dssp SCSEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESC
T ss_pred cceEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEec
Confidence 3466788999999999999999999999999999999999999999998766678899999999999875443
No 73
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=98.64 E-value=4.3e-08 Score=75.10 Aligned_cols=61 Identities=23% Similarity=0.549 Sum_probs=55.2
Q ss_pred EEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCCCCccee
Q 042234 100 HLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGSGRFKAR 166 (658)
Q Consensus 100 ~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~ 166 (658)
.|.++||+|.+|+..|++.|.+++||.++.+|+.++++.| + ...+.+++.+.+++.| |.+.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v--~-~~~~~~~i~~~i~~~G---y~~~ 63 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALV--E-GTADPKALVQAVEEEG---YKAE 63 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEE--C-SCCCHHHHHHHHHTTT---CEEE
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEE--C-CCCCHHHHHHHHHHcC---CCcE
Confidence 5789999999999999999999999999999999999999 3 4578899999999999 6553
No 74
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=98.63 E-value=8e-08 Score=75.39 Aligned_cols=64 Identities=14% Similarity=0.153 Sum_probs=57.5
Q ss_pred eeEEEeeecCccchhHHHHHhhhhcCC-CceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCCCCcceee
Q 042234 97 SKIHLQVDGIRTDHSMRMIENSLQALP-GVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGSGRFKARI 167 (658)
Q Consensus 97 ~~~~~~v~gm~c~~c~~~ie~~l~~~~-GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~~ 167 (658)
.+..|.++ |+|++|+..|++.|.+++ ||.++++|+.++++.|.++ .+.+++.+.+++.| |.+..
T Consensus 5 ~~~~~~v~-m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~---~~~~~i~~~i~~~G---y~~~~ 69 (73)
T 1cc8_A 5 KHYQFNVV-MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTT---LPYDFILEKIKKTG---KEVRS 69 (73)
T ss_dssp EEEEEEEC-CCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEES---SCHHHHHHHHHTTS---SCEEE
T ss_pred eEEEEEEe-eECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEe---CCHHHHHHHHHHhC---CCcee
Confidence 56789999 999999999999999999 9999999999999999973 56889999999999 65543
No 75
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=98.63 E-value=4.7e-08 Score=74.88 Aligned_cols=62 Identities=34% Similarity=0.691 Sum_probs=55.7
Q ss_pred EEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCcccc
Q 042234 25 RIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATL 89 (658)
Q Consensus 25 ~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 89 (658)
.+.++||+|++|+..+++++++++||.++.+|+.++++.+ + ...+.+++.+.++++||.+..
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v--~-~~~~~~~i~~~i~~~Gy~~~~ 64 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALV--E-GTADPKALVQAVEEEGYKAEV 64 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEE--C-SCCCHHHHHHHHHTTTCEEEE
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEE--C-CCCCHHHHHHHHHHcCCCcEe
Confidence 4889999999999999999999999999999999999998 3 346789999999999998643
No 76
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=98.59 E-value=4.6e-08 Score=75.24 Aligned_cols=56 Identities=23% Similarity=0.302 Sum_probs=52.7
Q ss_pred EEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcC
Q 042234 99 IHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTG 159 (658)
Q Consensus 99 ~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g 159 (658)
..|.++||+|++|+..|++.|.++ ||..+.+|+.++++.|.|++. +++.+.+++.|
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~----~~i~~~i~~~G 58 (67)
T 2kyz_A 3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL----DSVLKKLEEID 58 (67)
T ss_dssp EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH----HHHHHHHHTTT
T ss_pred EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH----HHHHHHHHHcC
Confidence 568899999999999999999999 999999999999999999875 78999999999
No 77
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=98.58 E-value=8.6e-08 Score=77.77 Aligned_cols=65 Identities=17% Similarity=0.224 Sum_probs=58.0
Q ss_pred cceEEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCcc
Q 042234 20 STQLCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEA 87 (658)
Q Consensus 20 ~~~~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~ 87 (658)
.+.+..+.|+||+|++|+..|+++|++++||.++.+|+.++++.+.++ .+++++.+.++++||.+
T Consensus 20 ~~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~---~~~~~i~~~i~~~Gy~~ 84 (85)
T 2k2p_A 20 QGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGV---SDAAHIAEIITAAGYTP 84 (85)
T ss_dssp --CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESC---CCHHHHHHHHHHTTCCC
T ss_pred cccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEec---CCHHHHHHHHHHcCCCC
Confidence 345678999999999999999999999999999999999999999863 56889999999999975
No 78
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=98.57 E-value=8.9e-08 Score=73.56 Aligned_cols=62 Identities=19% Similarity=0.447 Sum_probs=55.8
Q ss_pred EEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCccccc
Q 042234 24 CRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATLI 90 (658)
Q Consensus 24 ~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 90 (658)
..+.++||+|++|+..++++++++ |+..+.+|+.++++.+.+++. +++.+.++++||.+.+.
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~----~~i~~~i~~~Gy~~~~~ 64 (67)
T 2kyz_A 3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL----DSVLKKLEEIDYPVESY 64 (67)
T ss_dssp EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH----HHHHHHHHTTTCCCCBC
T ss_pred EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH----HHHHHHHHHcCCceeeE
Confidence 468999999999999999999999 999999999999999988753 78999999999987543
No 79
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=98.57 E-value=1.2e-07 Score=71.60 Aligned_cols=61 Identities=25% Similarity=0.464 Sum_probs=55.2
Q ss_pred EEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCcc
Q 042234 24 CRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEA 87 (658)
Q Consensus 24 ~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~ 87 (658)
..+.++||+|++|+..+++.+++++|+.++.+|+.++++.+.. ..+.+++.+.++++||.+
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~---~~~~~~i~~~i~~~G~~~ 63 (64)
T 2xmm_A 3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITS---ALGEEQLRTAIASAGYEV 63 (64)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEEC---SSCHHHHHHHHHHTTCCC
T ss_pred EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEe---cCCHHHHHHHHHHcCCCC
Confidence 4589999999999999999999999999999999999999983 256889999999999975
No 80
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=98.54 E-value=1.2e-07 Score=71.61 Aligned_cols=58 Identities=22% Similarity=0.310 Sum_probs=53.5
Q ss_pred EEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcC
Q 042234 99 IHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTG 159 (658)
Q Consensus 99 ~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g 159 (658)
..|.++||+|.+|+..|++.|.+++||.++++|+.++++.|.+ ..+.+++.+.+++.|
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~---~~~~~~i~~~i~~~G 60 (64)
T 2xmm_A 3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITS---ALGEEQLRTAIASAG 60 (64)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEEC---SSCHHHHHHHHHHTT
T ss_pred EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEe---cCCHHHHHHHHHHcC
Confidence 4688999999999999999999999999999999999999984 356888999999999
No 81
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=98.53 E-value=9.5e-08 Score=77.51 Aligned_cols=61 Identities=10% Similarity=0.255 Sum_probs=56.0
Q ss_pred ceeEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcC
Q 042234 96 MSKIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTG 159 (658)
Q Consensus 96 ~~~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g 159 (658)
..+..|.++||+|..|+..|++.|.+++||..+.+|+.++++.|.++ .+.+++.+.|++.|
T Consensus 21 ~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~---~~~~~i~~~i~~~G 81 (85)
T 2k2p_A 21 GAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGV---SDAAHIAEIITAAG 81 (85)
T ss_dssp -CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESC---CCHHHHHHHHHHTT
T ss_pred ccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEec---CCHHHHHHHHHHcC
Confidence 35678999999999999999999999999999999999999999974 57889999999999
No 82
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.52 E-value=2.5e-07 Score=88.51 Aligned_cols=70 Identities=40% Similarity=0.727 Sum_probs=63.6
Q ss_pred eEEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCcccccc
Q 042234 22 QLCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATLIS 91 (658)
Q Consensus 22 ~~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 91 (658)
.+..+.|+||+|++|+..|+++|++++||..+.+|+.++++.+.+++...+.+++.+.++++||.+....
T Consensus 122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 191 (202)
T 2rop_A 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVS 191 (202)
T ss_dssp EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC-
T ss_pred eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcC
Confidence 4578999999999999999999999999999999999999999998877788999999999999876543
No 83
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.51 E-value=3.2e-07 Score=76.60 Aligned_cols=67 Identities=16% Similarity=0.293 Sum_probs=59.7
Q ss_pred ceeEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCCCCcceeecC
Q 042234 96 MSKIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGSGRFKARIFP 169 (658)
Q Consensus 96 ~~~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~~~~ 169 (658)
..++.|.|+ |+|..|+..||+.|.+++||.++.+|+.++++.|.|+ .+.+++.+.|++.| |.+.+..
T Consensus 18 ~~~~~l~V~-m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~---~~~~~i~~~i~~~G---y~~~~~~ 84 (98)
T 2crl_A 18 LCTLEFAVQ-MTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTT---LPSQEVQALLEGTG---RQAVLKG 84 (98)
T ss_dssp CEEEEEEEC-CCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEES---SCHHHHHHHHHTTT---SCEEEEE
T ss_pred ceEEEEEEe-eECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEe---CCHHHHHHHHHHhC---CceEEcc
Confidence 467789999 9999999999999999999999999999999999984 56889999999999 6665543
No 84
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.49 E-value=5.5e-07 Score=75.13 Aligned_cols=68 Identities=34% Similarity=0.513 Sum_probs=60.6
Q ss_pred ceEEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCccccccc
Q 042234 21 TQLCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATLIST 92 (658)
Q Consensus 21 ~~~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 92 (658)
+.+..|.|+ |+|++|+.+|+++|++++||.++.+|+.++++.+.++ .+.+++.+.++++||.+.+...
T Consensus 18 ~~~~~l~V~-m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~---~~~~~i~~~i~~~Gy~~~~~~~ 85 (98)
T 2crl_A 18 LCTLEFAVQ-MTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTT---LPSQEVQALLEGTGRQAVLKGM 85 (98)
T ss_dssp CEEEEEEEC-CCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEES---SCHHHHHHHHHTTTSCEEEEES
T ss_pred ceEEEEEEe-eECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEe---CCHHHHHHHHHHhCCceEEccC
Confidence 456789999 9999999999999999999999999999999999974 4688999999999998766543
No 85
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=98.37 E-value=5.7e-07 Score=69.82 Aligned_cols=55 Identities=24% Similarity=0.418 Sum_probs=49.9
Q ss_pred eEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcC
Q 042234 98 KIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTG 159 (658)
Q Consensus 98 ~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g 159 (658)
+..|.+.||+|..|+..|++.+.+++||..+.+|+.++++.|.+++. .+.+++.|
T Consensus 4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~-------~~~i~~~G 58 (71)
T 2aj0_A 4 KTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS-------IQQVEQAG 58 (71)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC-------HHHHHHHH
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc-------HHHHHHhC
Confidence 56789999999999999999999999999999999999999998862 45778888
No 86
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=98.26 E-value=1.7e-06 Score=67.11 Aligned_cols=60 Identities=22% Similarity=0.452 Sum_probs=52.2
Q ss_pred EEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCcccc
Q 042234 23 LCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATL 89 (658)
Q Consensus 23 ~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 89 (658)
+..+.++||+|++|+..+++.+++++||.++.+|+..+++.+.++.. .+.+.++||.+..
T Consensus 4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~-------~~~i~~~Gy~~~~ 63 (71)
T 2aj0_A 4 KTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS-------IQQVEQAGAFEHL 63 (71)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC-------HHHHHHHHTTTTC
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc-------HHHHHHhCCCccc
Confidence 45699999999999999999999999999999999999999987652 3467888997644
No 87
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.08 E-value=6.2e-06 Score=94.05 Aligned_cols=67 Identities=36% Similarity=0.650 Sum_probs=62.8
Q ss_pred EEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCccccc
Q 042234 24 CRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATLI 90 (658)
Q Consensus 24 ~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 90 (658)
..+.|+||+|++|++.+|+.+++++||.++++|+.++++.+.+++...+.+++.+.++++||++...
T Consensus 4 ~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~~~ 70 (723)
T 3j09_A 4 RTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVVDE 70 (723)
T ss_dssp EEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEESSC
T ss_pred EEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCccccc
Confidence 5699999999999999999999999999999999999999999988788999999999999987543
No 88
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.04 E-value=2.3e-05 Score=75.36 Aligned_cols=68 Identities=18% Similarity=0.451 Sum_probs=59.8
Q ss_pred eEEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCcccccccC
Q 042234 22 QLCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATLISTG 93 (658)
Q Consensus 22 ~~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 93 (658)
.+..+.|+ |+|++|+.+|+++|++++||.++++|+.++++.+... .+++++.+.++++||.+.+....
T Consensus 6 ~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~---~~~~~I~~aI~~~Gy~a~~~~~~ 73 (222)
T 1qup_A 6 YEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS---VAPSTIINTLRNCGKDAIIRGAG 73 (222)
T ss_dssp EEEEEECC-CCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEES---SCHHHHHHHHHHTTCCCEEECCS
T ss_pred eEEEEEEc-cccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEecc---CCHHHHHHHHHHcCCccccccCC
Confidence 34679999 9999999999999999999999999999999999853 56889999999999998665543
No 89
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.02 E-value=1.3e-05 Score=77.07 Aligned_cols=66 Identities=14% Similarity=0.326 Sum_probs=58.6
Q ss_pred eeEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCCCCcceeecC
Q 042234 97 SKIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGSGRFKARIFP 169 (658)
Q Consensus 97 ~~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~~~~ 169 (658)
.+..|.++ |+|.+|++.||++|++++||.++++|+.++++.|.++ .+.+++.++|++.| |.+.+..
T Consensus 6 ~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~---~~~~~I~~aI~~~G---y~a~~~~ 71 (222)
T 1qup_A 6 YEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS---VAPSTIINTLRNCG---KDAIIRG 71 (222)
T ss_dssp EEEEEECC-CCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEES---SCHHHHHHHHHHTT---CCCEEEC
T ss_pred eEEEEEEc-cccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEecc---CCHHHHHHHHHHcC---Ccccccc
Confidence 56789999 9999999999999999999999999999999999863 56889999999999 6665543
No 90
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=97.90 E-value=3.9e-05 Score=74.96 Aligned_cols=68 Identities=18% Similarity=0.451 Sum_probs=59.9
Q ss_pred eEEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCcccccccC
Q 042234 22 QLCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATLISTG 93 (658)
Q Consensus 22 ~~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 93 (658)
.+..+.|+ |+|++|+.+|+++|++++||.++.+|+.++++.+... .+++++.+.++++||.+.+....
T Consensus 7 ~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~---~~~~~I~~aIe~~Gy~a~~~~~~ 74 (249)
T 1jk9_B 7 YEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS---VAPSTIINTLRNCGKDAIIRGAG 74 (249)
T ss_dssp EEEEEECC-CCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEES---SCHHHHHHHHHTTTCCCEEEEES
T ss_pred eeEEEEEe-eccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecC---CCHHHHHHHHHHhCCCcccccCC
Confidence 34679999 9999999999999999999999999999999999842 56889999999999998765543
No 91
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=97.83 E-value=2.8e-05 Score=75.98 Aligned_cols=65 Identities=14% Similarity=0.331 Sum_probs=57.7
Q ss_pred eeEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCCCCcceeec
Q 042234 97 SKIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGSGRFKARIF 168 (658)
Q Consensus 97 ~~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~~~ 168 (658)
.+..|.++ |+|.+|+..||++|++++||.++++|+.++++.|.. ..+.+++.++|++.| |.+.+.
T Consensus 7 ~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~---~~~~~~I~~aIe~~G---y~a~~~ 71 (249)
T 1jk9_B 7 YEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVES---SVAPSTIINTLRNCG---KDAIIR 71 (249)
T ss_dssp EEEEEECC-CCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEE---SSCHHHHHHHHHTTT---CCCEEE
T ss_pred eeEEEEEe-eccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEec---CCCHHHHHHHHHHhC---CCcccc
Confidence 56789999 999999999999999999999999999999999985 357889999999999 655443
No 92
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=93.84 E-value=0.015 Score=58.59 Aligned_cols=40 Identities=23% Similarity=0.042 Sum_probs=30.8
Q ss_pred HHhcCeEEecchHhhhh---------cCCcEEEecCCCcccCCceeEEEE
Q 042234 526 GASQGVLIKGGQALESA---------HKVNCIVFDKTGTLTVGKPVVVST 566 (658)
Q Consensus 526 ~~~~gi~~k~~~~~e~l---------g~v~~i~~DKTGTLT~~~~~v~~~ 566 (658)
+.+.++++|+++.+|++ .+.. |+||||||||++......+
T Consensus 16 l~k~~v~ikd~~~~e~~i~~~~kgg~~kL~-VV~DfdgTLT~~~~~g~~~ 64 (297)
T 4fe3_A 16 FQKSSVRIKNPTRVEEIICGLIKGGAAKLQ-IITDFNMTLSRFSYNGKRC 64 (297)
T ss_dssp GTSTTEECSCHHHHHHHHHHHHHHHHHHEE-EEECCTTTTBCSEETTEEC
T ss_pred HhcCCeEEcChHHHHHHHHHHHhCcchhEE-EEEcCCCCceeeccCCeEe
Confidence 47889999999999873 2333 7889999999987655544
No 93
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=89.02 E-value=0.51 Score=42.28 Aligned_cols=50 Identities=18% Similarity=0.286 Sum_probs=42.7
Q ss_pred chhHHHHHhhhhcCCCceEEeecCCc---------------cEEEEEeCCCCCChhhHHHHHHhc
Q 042234 109 DHSMRMIENSLQALPGVHGIGVDSGV---------------HKIAISYKPDMTGPRNFMKVIEST 158 (658)
Q Consensus 109 ~~c~~~ie~~l~~~~GV~~v~v~~~~---------------~~~~V~~d~~~~~~~~i~~~i~~~ 158 (658)
+.|=|-+|..+++++||.++.+=.+. +.|.|.|||..++.+++++..=+.
T Consensus 9 gGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy~~LL~~F~~~ 73 (168)
T 4gwb_A 9 GGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISYRRILELFFQI 73 (168)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCHHHHHHHHHHH
T ss_pred ccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCHHHHHHHHHhh
Confidence 46899999999999999999985553 479999999999999999866544
No 94
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=85.26 E-value=0.82 Score=42.07 Aligned_cols=50 Identities=16% Similarity=0.190 Sum_probs=42.1
Q ss_pred chhHHHHHhhhhcCCCceEEeecCCc-------------------cEEEEEeCCCCCChhhHHHHHHhc
Q 042234 109 DHSMRMIENSLQALPGVHGIGVDSGV-------------------HKIAISYKPDMTGPRNFMKVIEST 158 (658)
Q Consensus 109 ~~c~~~ie~~l~~~~GV~~v~v~~~~-------------------~~~~V~~d~~~~~~~~i~~~i~~~ 158 (658)
+.|=|-+|+.+.+++||.++.+=+.. +.|.|.|||..++.+++++..=+.
T Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy~~LL~~F~~~ 118 (199)
T 1fvg_A 50 MGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVFWEN 118 (199)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHHT
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCHHHHHHHHHHh
Confidence 46889999999999999999985443 459999999999999999866544
No 95
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=84.64 E-value=1.1 Score=41.31 Aligned_cols=50 Identities=16% Similarity=0.288 Sum_probs=41.9
Q ss_pred chhHHHHHhhhhcCCCceEEeecCCc---------------cEEEEEeCCCCCChhhHHHHHHhc
Q 042234 109 DHSMRMIENSLQALPGVHGIGVDSGV---------------HKIAISYKPDMTGPRNFMKVIEST 158 (658)
Q Consensus 109 ~~c~~~ie~~l~~~~GV~~v~v~~~~---------------~~~~V~~d~~~~~~~~i~~~i~~~ 158 (658)
+.|=|-+|..+.+++||.++.+=++. +.|.|.|||..++.+++++..=+.
T Consensus 32 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~~G~HaEaV~V~yDp~~iSy~~LL~~Ff~~ 96 (203)
T 1nwa_A 32 GGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDPTVTDYRTLLEFFFQI 96 (203)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEECTTTCCHHHHHHHHHHH
T ss_pred cCCeeeeHHHHhcCCCeEEEEeeecCCCCCCCChhhcCCceEEEEEEECCCcCCHHHHHHHHHHh
Confidence 46889999999999999999984443 568999999999999998865444
No 96
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=84.53 E-value=1 Score=41.86 Aligned_cols=50 Identities=18% Similarity=0.260 Sum_probs=42.3
Q ss_pred chhHHHHHhhhhcCCCceEEeecCCc-------------------cEEEEEeCCCCCChhhHHHHHHhc
Q 042234 109 DHSMRMIENSLQALPGVHGIGVDSGV-------------------HKIAISYKPDMTGPRNFMKVIEST 158 (658)
Q Consensus 109 ~~c~~~ie~~l~~~~GV~~v~v~~~~-------------------~~~~V~~d~~~~~~~~i~~~i~~~ 158 (658)
+.|=|-+|+.+.+++||.++.+=++. +.|.|.|||..++.+++++..=+.
T Consensus 49 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy~~LL~~F~~~ 117 (211)
T 1ff3_A 49 MGXFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWEN 117 (211)
T ss_dssp CSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHHS
T ss_pred cCCeEEehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCHHHHHHHHHHh
Confidence 46888899999999999999985552 459999999999999999866554
No 97
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=83.07 E-value=1 Score=41.25 Aligned_cols=50 Identities=12% Similarity=0.167 Sum_probs=41.7
Q ss_pred chhHHHHHhhhhcCCCceEEeecCCc-------------------cEEEEEeCCCCCChhhHHHHHHhc
Q 042234 109 DHSMRMIENSLQALPGVHGIGVDSGV-------------------HKIAISYKPDMTGPRNFMKVIEST 158 (658)
Q Consensus 109 ~~c~~~ie~~l~~~~GV~~v~v~~~~-------------------~~~~V~~d~~~~~~~~i~~~i~~~ 158 (658)
+.|=|-+|+.+.+++||.++.+=.+. +.|.|.|||..++.+++++..=+.
T Consensus 9 gGCFWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp~~isy~~LL~~f~~~ 77 (193)
T 3bqh_A 9 GGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFRV 77 (193)
T ss_dssp ESCHHHHHHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEETTTCCHHHHHHHHHHH
T ss_pred cCCeeehHHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECCCcCCHHHHHHHHHHh
Confidence 46889999999999999999984443 358999999999999998866544
No 98
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=82.96 E-value=1.1 Score=42.55 Aligned_cols=50 Identities=18% Similarity=0.284 Sum_probs=41.9
Q ss_pred chhHHHHHhhhhcCCCceEEeecCCc-------------------cEEEEEeCCCCCChhhHHHHHHhc
Q 042234 109 DHSMRMIENSLQALPGVHGIGVDSGV-------------------HKIAISYKPDMTGPRNFMKVIEST 158 (658)
Q Consensus 109 ~~c~~~ie~~l~~~~GV~~v~v~~~~-------------------~~~~V~~d~~~~~~~~i~~~i~~~ 158 (658)
+.|=|-+|+.+.+++||.++.+=+.. +.|.|.|||..++.+++++..=+.
T Consensus 101 gGCFWgvE~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP~~ISy~~LL~~Fw~~ 169 (261)
T 2j89_A 101 AGCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSFDTLIDVLWAR 169 (261)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECTTTSCHHHHHHHHHHH
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHHHHh
Confidence 46889999999999999999985543 359999999999999998865444
No 99
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=77.14 E-value=12 Score=28.93 Aligned_cols=58 Identities=14% Similarity=0.095 Sum_probs=43.4
Q ss_pred EEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCcccccc
Q 042234 24 CRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATLIS 91 (658)
Q Consensus 24 ~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 91 (658)
..+...|+.|+.-.....+++++++. ...+.+..+.+ ...+.+...++..||......
T Consensus 11 ~~lD~rGl~CP~Pvl~~kkal~~l~~---------G~~l~V~~dd~-~a~~di~~~~~~~G~~~~~~~ 68 (82)
T 3lvj_C 11 HTLDALGLRCPEPVMMVRKTVRNMQP---------GETLLIIADDP-ATTRDIPGFCTFMEHELVAKE 68 (82)
T ss_dssp EEEECTTCCTTHHHHHHHHHHHTSCT---------TCEEEEEECCT-THHHHHHHHHHHTTCEEEEEE
T ss_pred EEEECCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCc-cHHHHHHHHHHHCCCEEEEEE
Confidence 56899999999999999999998742 22344554444 356788888999999875543
No 100
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=76.87 E-value=2.4 Score=41.85 Aligned_cols=50 Identities=12% Similarity=0.155 Sum_probs=41.9
Q ss_pred chhHHHHHhhhhcCCCceEEeecCCc-----------------cEEEEEeCCCCCChhhHHHHHHhc
Q 042234 109 DHSMRMIENSLQALPGVHGIGVDSGV-----------------HKIAISYKPDMTGPRNFMKVIEST 158 (658)
Q Consensus 109 ~~c~~~ie~~l~~~~GV~~v~v~~~~-----------------~~~~V~~d~~~~~~~~i~~~i~~~ 158 (658)
+.|=|-+|+.+.+++||.++.+=.+. +.|.|.|||..++.+++++..=+.
T Consensus 9 gGCFWg~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc~TGHaEaV~V~yDp~~isy~~LL~~f~~~ 75 (313)
T 3e0m_A 9 GGCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDEKEVSLREILLYYFRV 75 (313)
T ss_dssp CSCHHHHHHHHTTSTTEEEEEEEEESCSSSCCCTTTHHHHTCEEEEEEEECTTTSCHHHHHHHHHHH
T ss_pred cCCchhhHHHHhhCCCeEEeecccCCCCCCCCChhhhccCCCeEEEEEEECCCcCCHHHHHHHHHhh
Confidence 46889999999999999999985543 458999999999999998865544
No 101
>2z51_A NIFU-like protein 2, chloroplast; CNFU, iron-sulfur cluster biosynthesis, metal transport; 1.35A {Arabidopsis thaliana} PDB: 2jnv_A
Probab=73.17 E-value=1.1 Score=39.70 Aligned_cols=97 Identities=20% Similarity=0.410 Sum_probs=53.6
Q ss_pred EEEEEecCCCChhhHH-------HHHHHHh-CCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHh--------cCCc
Q 042234 23 LCRIGINGMTCTTCST-------TVEKALQ-AIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIED--------TGFE 86 (658)
Q Consensus 23 ~~~~~i~gm~C~~C~~-------~ve~~l~-~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~--------~Gy~ 86 (658)
.+.++..| .|.+|.. .||+.|+ ..|.+..+..-..... . -..+.+.+.+.+++ .|-+
T Consensus 36 ~V~v~l~G-aC~gC~ss~~Tlk~~Ie~~L~~~vpev~~V~~v~~~~e-~-----l~L~~~~v~~~L~~iRP~L~~~dGGd 108 (154)
T 2z51_A 36 VVRVKLQG-ACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEET-G-----LELNEENIEKVLEEIRPYLIGTADGS 108 (154)
T ss_dssp EEEEEEEH-HHHTCHHHHHHHHHHHHHHHHHHCTTCCEEEECCSSCC-S-----CCSSHHHHHHHHHHHGGGCCGGGCCE
T ss_pred EEEEEEEC-CCCCCCccHhHHHHHHHHHHHHhCCCceEEEEccCchh-h-----hHHHHHHHHHHHHHHHHHhhhcCCCC
Confidence 45677777 5666664 4455554 6788776654321111 0 11234445444443 2333
Q ss_pred ccccccCCcceeEEEeeecCccchhHH---HHHhhhh-cCCCceEEe
Q 042234 87 ATLISTGEDMSKIHLQVDGIRTDHSMR---MIENSLQ-ALPGVHGIG 129 (658)
Q Consensus 87 ~~~~~~~~~~~~~~~~v~gm~c~~c~~---~ie~~l~-~~~GV~~v~ 129 (658)
.+...-+ ...++++..|. |++|.. .||+.|+ ++|+|..|.
T Consensus 109 velv~v~--~~~v~v~l~Ga-c~~~~Tlk~~Ie~~l~e~vP~i~~V~ 152 (154)
T 2z51_A 109 LDLVEIE--DPIVKIRITGP-AAGVMTVRVAVTQKLREKIPSIAAVQ 152 (154)
T ss_dssp EEEEEEE--TTEEEEEEESG-GGGCHHHHHHHHHHHHHHCTTCCEEE
T ss_pred eEEEEEE--CCEEEEEEecC-CcccHhHHHHHHHHHHHHCCCccEEE
Confidence 3333222 24566777775 888842 6787777 789998874
No 102
>3pim_A Peptide methionine sulfoxide reductase; methionine-S-sulfoxide reductase, oxidoreductase; 1.90A {Saccharomyces cerevisiae} PDB: 3pil_A 3pin_B
Probab=71.54 E-value=2.2 Score=38.80 Aligned_cols=50 Identities=12% Similarity=0.109 Sum_probs=41.0
Q ss_pred chhHHHHHhhhhcC--CCceEEeecCCcc-------------------------EEEEEeCCCCCChhhHHHHHHhc
Q 042234 109 DHSMRMIENSLQAL--PGVHGIGVDSGVH-------------------------KIAISYKPDMTGPRNFMKVIEST 158 (658)
Q Consensus 109 ~~c~~~ie~~l~~~--~GV~~v~v~~~~~-------------------------~~~V~~d~~~~~~~~i~~~i~~~ 158 (658)
+.|=|-+|..++++ +||.++.+=.+.+ .|.|.|||..++.+++++..=+.
T Consensus 26 gGCFWg~E~~F~~l~g~GV~~t~~GYagG~~~~~n~~~~PtY~~Vc~g~TGHaEaV~V~yDp~~isy~~LL~~Ff~~ 102 (187)
T 3pim_A 26 CGCFWGTEHMYRKYLNDRIVDCKVGYANGEESKKDSPSSVSYKRVCGGDTDFAEVLQVSYNPKVITLRELTDFFFRI 102 (187)
T ss_dssp SSCHHHHHHHHHHHHGGGSSEEEEEEEEECCC---------CSCBTTBCTTCEEEEEEEECTTTSCHHHHHHHHTTS
T ss_pred cCCchhhHHHHHHhcCCCeEEEEeeecCCcccCCCCCCCCchhhhccCCCCCeEEEEEEECCccCCHHHHHHHHHHh
Confidence 46888899999999 9999988754433 38999999999999999866443
No 103
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=70.32 E-value=13 Score=29.81 Aligned_cols=58 Identities=21% Similarity=0.234 Sum_probs=42.8
Q ss_pred EEEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCccccc
Q 042234 23 LCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATLI 90 (658)
Q Consensus 23 ~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 90 (658)
...+...|+.|+.-.....+++++++. .+.+.+..+.+ .+.+.+...++..||.....
T Consensus 27 ~~~LD~rGl~CP~PvlktkkaL~~l~~---------Ge~L~Vl~dd~-~a~~dIp~~~~~~G~~v~~~ 84 (97)
T 1je3_A 27 DYRLDMVGEPCPYPAVATLEAMPQLKK---------GEILEVVSDCP-QSINNIPLDARNHGYTVLDI 84 (97)
T ss_dssp EEEECSBCCSSSSSTHHHHHHTTTCCS---------SCEEEEEEBCS-SSSCHHHHHHHHHTCSEEEE
T ss_pred CeEEeCCCCCCCHHHHHHHHHHHcCCC---------CCEEEEEECCc-chHHHHHHHHHHCCCEEEEE
Confidence 456899999999999999999998742 22344554444 34577888899999987543
No 104
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=66.82 E-value=34 Score=27.47 Aligned_cols=58 Identities=22% Similarity=0.328 Sum_probs=44.0
Q ss_pred EEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCcccccc
Q 042234 24 CRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATLIS 91 (658)
Q Consensus 24 ~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 91 (658)
..+...|+.|+.-.....+++++++. .+.+.+..+.. .+.+.+...++..||......
T Consensus 27 ~~LD~rGl~CP~Pvl~tkkaL~~l~~---------Ge~L~Vl~dd~-~a~~dI~~~~~~~G~~v~~~e 84 (98)
T 1jdq_A 27 KTLDVRGEVCPVPDVETKRALQNMKP---------GEILEVWIDYP-MSKERIPETVKKLGHEVLEIE 84 (98)
T ss_dssp EEEECSSCCSSHHHHHHHHHHHTCCT---------TCEEEEEESSC-THHHHHHHHHHHSSCCEEEEE
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCc-cHHHHHHHHHHHCCCEEEEEE
Confidence 56899999999999999999998742 23355555544 356888888999999875543
No 105
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=63.35 E-value=32 Score=27.30 Aligned_cols=63 Identities=21% Similarity=0.320 Sum_probs=49.9
Q ss_pred ceeEEEeeecCccchhHHHHHhhhhcCCCceEEee-----cCCccEEEEEeCCCCCChhhHHHHHHhcC
Q 042234 96 MSKIHLQVDGIRTDHSMRMIENSLQALPGVHGIGV-----DSGVHKIAISYKPDMTGPRNFMKVIESTG 159 (658)
Q Consensus 96 ~~~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v-----~~~~~~~~V~~d~~~~~~~~i~~~i~~~g 159 (658)
.+|+.+.+-..+ ....-.+-+.|.+++||..+++ +-.+..+.|+.....++.+++.++|++.|
T Consensus 6 irRlVLDVlKPh-~p~i~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~G 73 (97)
T 2raq_A 6 LIRIVLDILKPH-EPIIPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYG 73 (97)
T ss_dssp EEEEEEEEECCS-CSCHHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTT
T ss_pred ceEEEEEecCCC-CCCHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcC
Confidence 577777776443 3335567788889999988865 55678888998889999999999999998
No 106
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=62.42 E-value=26 Score=27.75 Aligned_cols=64 Identities=19% Similarity=0.278 Sum_probs=48.4
Q ss_pred ceeEEEeeecCccchhHHHHHhhhhcCCCceEEee-----cCCccEEEEEeCCCCCChhhHHHHHHhcC
Q 042234 96 MSKIHLQVDGIRTDHSMRMIENSLQALPGVHGIGV-----DSGVHKIAISYKPDMTGPRNFMKVIESTG 159 (658)
Q Consensus 96 ~~~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v-----~~~~~~~~V~~d~~~~~~~~i~~~i~~~g 159 (658)
.+|+.+.+-.....-..-.+-+.|.+++||..+++ +-.+..+.|+.....++.+++.++|++.|
T Consensus 4 irRlVLDVlKP~h~P~ivd~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~G 72 (96)
T 2x3d_A 4 IRRLVLDVLKPIRGTSIVDLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEG 72 (96)
T ss_dssp EEEEEEEEEEESSSSCHHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTT
T ss_pred eEEEEEEcccCCCCCCHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcC
Confidence 36666766533122334566788999999998876 55677888888888999999999999998
No 107
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=60.73 E-value=16 Score=32.55 Aligned_cols=50 Identities=24% Similarity=0.488 Sum_probs=42.5
Q ss_pred hhhHHHHHHHHhCCCCceEEEeeccCC---------------eEEEEeCCCCCCHHHHHHHHHhc
Q 042234 34 TTCSTTVEKALQAIPGVQNVRVALATE---------------AAEVHYDPKILNYNQILAAIEDT 83 (658)
Q Consensus 34 ~~C~~~ve~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i~~~ 83 (658)
++|-|-+|....+++||.++.+-.+.+ .+.|.+|+...+.+++.+..-..
T Consensus 9 gGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy~~LL~~F~~~ 73 (168)
T 4gwb_A 9 GGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISYRRILELFFQI 73 (168)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCHHHHHHHHHHH
T ss_pred ccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCHHHHHHHHHhh
Confidence 578999999999999999999977654 67899999999999998876543
No 108
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=56.31 E-value=19 Score=28.59 Aligned_cols=63 Identities=21% Similarity=0.292 Sum_probs=49.2
Q ss_pred ceeEEEeeecCccchhHHHHHhhhhcCCCceEEee-----cCCccEEEEEeCCCCCChhhHHHHHHhcC
Q 042234 96 MSKIHLQVDGIRTDHSMRMIENSLQALPGVHGIGV-----DSGVHKIAISYKPDMTGPRNFMKVIESTG 159 (658)
Q Consensus 96 ~~~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v-----~~~~~~~~V~~d~~~~~~~~i~~~i~~~g 159 (658)
.+|+.+.+-..+ .-..-.+-+.|.+++||..+++ +-.+..++|+.....++.+++.++|++.|
T Consensus 6 iRRlVLDVlKPh-~P~ivdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~G 73 (100)
T 3bpd_A 6 LRRLVLDVLKPH-EPKTIVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMG 73 (100)
T ss_dssp EEEEEEEEEEES-CSCHHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTT
T ss_pred ceEEEEEecCCC-CCCHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcC
Confidence 477777776333 3335567788999999998876 55677888888888899999999999998
No 109
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=53.01 E-value=28 Score=27.21 Aligned_cols=57 Identities=18% Similarity=0.295 Sum_probs=42.0
Q ss_pred EEEecCCCChhhHHHHHHHHhCCC-CceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCcccccc
Q 042234 25 RIGINGMTCTTCSTTVEKALQAIP-GVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATLIS 91 (658)
Q Consensus 25 ~~~i~gm~C~~C~~~ve~~l~~~~-gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 91 (658)
.+...|+.|+.-.....+++++++ . .+.+.+..+.+ .+.+.+...+...||......
T Consensus 3 ~lD~rGl~CP~Pvl~~kkal~~l~~~---------G~~L~V~~dd~-~a~~dI~~~~~~~G~~v~~~~ 60 (87)
T 3hz7_A 3 TIDALGQVCPIPVIRAKKALAELGEA---------GGVVTVLVDND-ISRQNLQKMAEGMGYQSEYLE 60 (87)
T ss_dssp EEECTTCCTTHHHHHHHHHHHTTGGG---------CCEEEEEESSH-HHHHHHHHHHHHHTCEEEEEE
T ss_pred EEEcCCCCCCHHHHHHHHHHHhccCC---------CCEEEEEECCc-cHHHHHHHHHHHCCCEEEEEE
Confidence 478899999999999999999873 1 12344554443 356788888999999875544
No 110
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=51.87 E-value=25 Score=32.26 Aligned_cols=49 Identities=18% Similarity=0.390 Sum_probs=40.8
Q ss_pred hhhHHHHHHHHhCCCCceEEEeeccCCe-------------------EEEEeCCCCCCHHHHHHHHHh
Q 042234 34 TTCSTTVEKALQAIPGVQNVRVALATEA-------------------AEVHYDPKILNYNQILAAIED 82 (658)
Q Consensus 34 ~~C~~~ve~~l~~~~gv~~~~v~~~~~~-------------------~~v~~~~~~~~~~~i~~~i~~ 82 (658)
.+|-|-+|....+++||.++.+-.+.+. +.|.||+...+.+++.+..-+
T Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy~~LL~~F~~ 117 (199)
T 1fvg_A 50 MGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVFWE 117 (199)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCHHHHHHHHHH
Confidence 5788999999999999999998765543 778899998898888887644
No 111
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=48.11 E-value=29 Score=32.98 Aligned_cols=50 Identities=28% Similarity=0.502 Sum_probs=41.6
Q ss_pred hhhHHHHHHHHhCCCCceEEEeeccCCe-------------------EEEEeCCCCCCHHHHHHHHHhc
Q 042234 34 TTCSTTVEKALQAIPGVQNVRVALATEA-------------------AEVHYDPKILNYNQILAAIEDT 83 (658)
Q Consensus 34 ~~C~~~ve~~l~~~~gv~~~~v~~~~~~-------------------~~v~~~~~~~~~~~i~~~i~~~ 83 (658)
++|-|-+|....+++||.++.+-.+.+. +.|.||+...+.+++.+..-+.
T Consensus 101 gGCFWgvE~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP~~ISy~~LL~~Fw~~ 169 (261)
T 2j89_A 101 AGCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSFDTLIDVLWAR 169 (261)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECTTTSCHHHHHHHHHHH
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHHHHh
Confidence 5789999999999999999998765543 7799999999999998876443
No 112
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=47.41 E-value=28 Score=31.73 Aligned_cols=50 Identities=26% Similarity=0.323 Sum_probs=41.1
Q ss_pred hhhHHHHHHHHhCCCCceEEEeeccCCe-------------------EEEEeCCCCCCHHHHHHHHHhc
Q 042234 34 TTCSTTVEKALQAIPGVQNVRVALATEA-------------------AEVHYDPKILNYNQILAAIEDT 83 (658)
Q Consensus 34 ~~C~~~ve~~l~~~~gv~~~~v~~~~~~-------------------~~v~~~~~~~~~~~i~~~i~~~ 83 (658)
++|-|-+|....+++||.++.+-.+.+. +.|.||+...+.+++.+..-..
T Consensus 9 gGCFWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp~~isy~~LL~~f~~~ 77 (193)
T 3bqh_A 9 GGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFRV 77 (193)
T ss_dssp ESCHHHHHHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEETTTCCHHHHHHHHHHH
T ss_pred cCCeeehHHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECCCcCCHHHHHHHHHHh
Confidence 5788999999999999999998765443 7789999999999998876443
No 113
>1pav_A Hypothetical protein TA1170/TA1414; structural genomics, structure, fast NMR, semiautomated analysis; NMR {Thermoplasma acidophilum} SCOP: d.68.3.3
Probab=46.26 E-value=23 Score=26.92 Aligned_cols=56 Identities=20% Similarity=0.093 Sum_probs=41.2
Q ss_pred EEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHhcCCccccc
Q 042234 25 RIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIEDTGFEATLI 90 (658)
Q Consensus 25 ~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 90 (658)
.+...|+.|+.-.....+++++++. .+.+.+..+.+ .+...+...++..||.....
T Consensus 8 ~lD~rGl~CP~Pvl~~k~al~~l~~---------G~~L~V~~dd~-~a~~di~~~~~~~G~~~~~~ 63 (78)
T 1pav_A 8 VIDARGSYCPGPLMELIKAYKQAKV---------GEVISVYSTDA-GTKKDAPAWIQKSGQELVGV 63 (78)
T ss_dssp CCCBSSCSSCTTHHHHHHHHTTSCT---------TCCEECCBSSS-CHHHHHHHHHHHHTEEECCC
T ss_pred EEECCCCCCCHHHHHHHHHHHcCCC---------CCEEEEEECCc-cHHHHHHHHHHHCCCEEEEE
Confidence 3788899999999999999998742 22344444443 34678888899999987543
No 114
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=44.65 E-value=37 Score=31.19 Aligned_cols=49 Identities=27% Similarity=0.512 Sum_probs=41.1
Q ss_pred hhhHHHHHHHHhCCCCceEEEeeccC---------------CeEEEEeCCCCCCHHHHHHHHHh
Q 042234 34 TTCSTTVEKALQAIPGVQNVRVALAT---------------EAAEVHYDPKILNYNQILAAIED 82 (658)
Q Consensus 34 ~~C~~~ve~~l~~~~gv~~~~v~~~~---------------~~~~v~~~~~~~~~~~i~~~i~~ 82 (658)
++|-|-+|....+++||.++.+-.+. ..+.|.||+...+.+++.+..-.
T Consensus 32 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~~G~HaEaV~V~yDp~~iSy~~LL~~Ff~ 95 (203)
T 1nwa_A 32 GGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDPTVTDYRTLLEFFFQ 95 (203)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEECTTTCCHHHHHHHHHH
T ss_pred cCCeeeeHHHHhcCCCeEEEEeeecCCCCCCCChhhcCCceEEEEEEECCCcCCHHHHHHHHHH
Confidence 57888899999999999999987654 45778999999999999887644
No 115
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=43.89 E-value=39 Score=31.24 Aligned_cols=49 Identities=24% Similarity=0.444 Sum_probs=40.8
Q ss_pred hhhHHHHHHHHhCCCCceEEEeeccCC-------------------eEEEEeCCCCCCHHHHHHHHHh
Q 042234 34 TTCSTTVEKALQAIPGVQNVRVALATE-------------------AAEVHYDPKILNYNQILAAIED 82 (658)
Q Consensus 34 ~~C~~~ve~~l~~~~gv~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i~~ 82 (658)
.+|-|-+|....+++||.++.+-.+.+ .+.|.||+...+.+++.+..-+
T Consensus 49 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy~~LL~~F~~ 116 (211)
T 1ff3_A 49 MGXFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWE 116 (211)
T ss_dssp CSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred cCCeEEehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCHHHHHHHHHH
Confidence 578888999999999999999876543 3779999999999998887654
No 116
>2jmz_A Hypothetical protein MJ0781; unknown function; NMR {Methanocaldococcus jannaschii} PDB: 2jnq_A
Probab=42.38 E-value=28 Score=31.62 Aligned_cols=35 Identities=20% Similarity=0.296 Sum_probs=25.9
Q ss_pred eEEEEeecCCCCceeeEEeeCCCCCCCCEEEEeCCCeeeec
Q 042234 334 TATLLTLDEDGNVISEEEIDSRLIQRNDVIKIIPGAKVASD 374 (658)
Q Consensus 334 ~~~v~r~~~~g~~~~~~~i~~~~l~~GDii~v~~ge~iPaD 374 (658)
...+.+ +|+ ...+++++|++||.|.+..|..++.|
T Consensus 104 p~~v~~---~g~---~~w~~A~eLk~GD~v~~~~~~~~~~~ 138 (186)
T 2jmz_A 104 PVYISK---TGE---VLEINAEMVKVGDYIYIPKNNTINLD 138 (186)
T ss_dssp EEEEEE---TTE---EEEEEGGGCCTTSEEEEECSSSEEEE
T ss_pred EEEEeC---CCe---EEEEEhhcCCCCCEEEecccCCccce
Confidence 444443 454 56789999999999999887666655
No 117
>3sde_A Paraspeckle component 1; RRM, anti parallel right handed coiled-coil, NOPS, DBHS, RNA protein, RNA binding; 1.90A {Homo sapiens} PDB: 3sde_B
Probab=40.35 E-value=1.3e+02 Score=28.58 Aligned_cols=127 Identities=11% Similarity=0.085 Sum_probs=85.4
Q ss_pred EEEEecCCCChhhHHHHHHHHhCCCCceEEEeeccCCeEEEEeCCCCCCHHHHHHHHHh-cCCcc--cccccCCcceeEE
Q 042234 24 CRIGINGMTCTTCSTTVEKALQAIPGVQNVRVALATEAAEVHYDPKILNYNQILAAIED-TGFEA--TLISTGEDMSKIH 100 (658)
Q Consensus 24 ~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~-~Gy~~--~~~~~~~~~~~~~ 100 (658)
.++.|.++.-..-...+.+.+++...|.++.+....+-+.|.+.. .++...++.. .|... ..+...-......
T Consensus 23 ~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~kg~afV~f~~----~~~A~~A~~~l~g~~i~g~~l~v~~a~~~~~ 98 (261)
T 3sde_A 23 CRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLES----RTLAEIAKAELDGTILKSRPLRIRFATHGAA 98 (261)
T ss_dssp GEEEEESCCTTCCHHHHHHHTGGGCCCSEEEEETTTTEEEEECSS----HHHHHHHHHHHTTCEETTEECEEEECCCSSE
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCCEEEEEEeCCCcEEEEEECC----HHHHHHHHHHcCCcEECCceeEeeecccCCc
Confidence 468899998877888999999998889999998788889998864 3444455542 23221 1111110112235
Q ss_pred EeeecCccchhHHHHHhhhhcCCCceEEeecCC-----ccEEEEEeCCCCCChhhHHHHHHhc
Q 042234 101 LQVDGIRTDHSMRMIENSLQALPGVHGIGVDSG-----VHKIAISYKPDMTGPRNFMKVIEST 158 (658)
Q Consensus 101 ~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~-----~~~~~V~~d~~~~~~~~i~~~i~~~ 158 (658)
+.|.++.-......+.+.+...-.|.++.+-.. .+.+.|+|. +.++-.++++..
T Consensus 99 l~v~nl~~~~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~----~~~~A~~A~~~l 157 (261)
T 3sde_A 99 LTVKNLSPVVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVEFA----AKPPARKALERC 157 (261)
T ss_dssp EEEESCCTTCCHHHHHHHHGGGSCEEEEEEEEETTSCEEEEEEEEES----SHHHHHHHHHHH
T ss_pred ccccCCCCCCCHHHHHHHHHhcCCeEEEEeeeCCCCCcCcEEEEEeC----CHHHHHHHHHHh
Confidence 778888766667889999988878988887544 456889995 344555555553
No 118
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=35.18 E-value=57 Score=32.08 Aligned_cols=50 Identities=26% Similarity=0.315 Sum_probs=41.6
Q ss_pred hhhHHHHHHHHhCCCCceEEEeeccCCe-----------------EEEEeCCCCCCHHHHHHHHHhc
Q 042234 34 TTCSTTVEKALQAIPGVQNVRVALATEA-----------------AEVHYDPKILNYNQILAAIEDT 83 (658)
Q Consensus 34 ~~C~~~ve~~l~~~~gv~~~~v~~~~~~-----------------~~v~~~~~~~~~~~i~~~i~~~ 83 (658)
++|-|-+|....+++||.++.+-.+.+. +.|.||+...+.+++.+..-..
T Consensus 9 gGCFWg~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc~TGHaEaV~V~yDp~~isy~~LL~~f~~~ 75 (313)
T 3e0m_A 9 GGCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDEKEVSLREILLYYFRV 75 (313)
T ss_dssp CSCHHHHHHHHTTSTTEEEEEEEEESCSSSCCCTTTHHHHTCEEEEEEEECTTTSCHHHHHHHHHHH
T ss_pred cCCchhhHHHHhhCCCeEEeecccCCCCCCCCChhhhccCCCeEEEEEEECCCcCCHHHHHHHHHhh
Confidence 5789999999999999999998765543 7799999999999988876543
No 119
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=31.56 E-value=22 Score=31.71 Aligned_cols=24 Identities=29% Similarity=0.411 Sum_probs=19.0
Q ss_pred hhhcCCcEEEecCCCcccCCceeE
Q 042234 540 ESAHKVNCIVFDKTGTLTVGKPVV 563 (658)
Q Consensus 540 e~lg~v~~i~~DKTGTLT~~~~~v 563 (658)
|.+..+..|++|--||||.+...+
T Consensus 4 ~~~~~ikliv~D~DGtL~d~~~~~ 27 (168)
T 3ewi_A 4 EKLKEIKLLVCNIDGCLTNGHIYV 27 (168)
T ss_dssp ---CCCCEEEEECCCCCSCSCCBC
T ss_pred hhHhcCcEEEEeCccceECCcEEE
Confidence 677889999999999999998754
No 120
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=31.47 E-value=4.4e+02 Score=30.68 Aligned_cols=198 Identities=11% Similarity=0.046 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcc-----CCCeEEEEee--cCCCCceeeEEeeCCCCCCCCEEEEeCCCeeeecEEE
Q 042234 305 FILLGKYLEVLAKGKTSEAIAKLMDL-----APETATLLTL--DEDGNVISEEEIDSRLIQRNDVIKIIPGAKVASDGYV 377 (658)
Q Consensus 305 ~~~~~~~l~~~~~~k~~~~~~~l~~~-----~~~~~~v~r~--~~~g~~~~~~~i~~~~l~~GDii~v~~ge~iPaD~~v 377 (658)
+..+-.+++.+...++.+.++++... ...+...+.. -.-|. ...+..-|.+|-|.++++.++. -+|==.
T Consensus 152 i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GD---iV~l~~Gd~VPAD~~ll~~~~l-~VdES~ 227 (1034)
T 3ixz_A 152 VTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGD---LVEMKGGDRVPADIRILQAQGR-KVDNSS 227 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCc---EEEEcCCceecCCeEEEEeCCc-eEEecc
Confidence 33333344556667777778887531 1111111110 01354 6778888999999998886542 255555
Q ss_pred Eecce-eeecccccCCCcce-e---ecCCCeeeeeceecCceEEEEEEEecCCcHHHHHHHHHHHHh-hcCChhHHHHHh
Q 042234 378 LWGQS-HVNESMITGEARPV-A---KRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQ-MAKAPVQKFADR 451 (658)
Q Consensus 378 l~g~~-~vdes~LtGEs~pv-~---k~~g~~v~~Gt~~~~g~~~~~v~~~g~~T~~~~i~~~~~~~~-~~~~~~~~~~~~ 451 (658)
|.|++ .|.-..-.-+..|. . .-.|..+..|+...-=..++.=+..|. +.++.+..+... .-...++++...
T Consensus 228 LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~Gk---I~~~~~~~~~~~tpl~~~~~~~~~~ 304 (1034)
T 3ixz_A 228 LTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGR---IASLASGVENEKTPIAIEIEHFVDI 304 (1034)
T ss_pred cCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhH---HHHhhcccccCCCcHHHHHHHHHHH
Confidence 55665 22211110011111 1 245667777763211011111111111 111111100000 001123455555
Q ss_pred HhhhhhHHHHHHHHHHHHH-HHHhhccCCCCCCcCCCchhhHHHHHHHHhheeeeeccccccchHHHHHHHHHH
Q 042234 452 ISKYFVPLVIILSFSTWLA-WFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTG 524 (658)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vli~~~P~~l~l~~~~~~~~~~~ 524 (658)
+..+.+.+.+++.++.++. ..+.. .+..++..+++..-.+.|.++.+++.++.....+
T Consensus 305 l~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rmak 363 (1034)
T 3ixz_A 305 IAGLAILFGATFFIVAMCIGYTFLR---------------AMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLAS 363 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHhcchHHH---------------HHHHHHHHHHheeccccHHHHHHHHHHHHHHHhh
Confidence 5554444444333332222 11111 2344455566677777888888888887655443
No 121
>3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli}
Probab=31.27 E-value=25 Score=31.38 Aligned_cols=41 Identities=10% Similarity=0.058 Sum_probs=30.8
Q ss_pred eEEEEEeccCCCHHHHHHHHHHhh---ccCCCHHHHHHHHHHHh
Q 042234 562 VVVSTKLLKNMVLRDFYEVVAATE---VNSEHPLAKAIVEYAKK 602 (658)
Q Consensus 562 ~v~~~~~~~~~~~~~~~~~~~~~~---~~s~hp~~~ai~~~~~~ 602 (658)
.+.......+.+.++++.+|+-.. ....+|++.||++++..
T Consensus 3 ~l~~~~d~~G~~~~~vl~~a~L~s~~~~~~~n~~d~Ail~~~~~ 46 (170)
T 3gwi_A 3 VLENHTDISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDE 46 (170)
T ss_dssp EEEEEECTTSCBCHHHHHHHHHHHHHCCSCCCHHHHHHHHTSCH
T ss_pred EEEEEeCCCCCCHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHh
Confidence 455666677888889998887654 35679999999987643
No 122
>2v50_A Multidrug resistance protein MEXB; DDM, RND, membrane, detergent, transport, cell membrane, transmembrane, membrane protein; HET: LMT; 3.00A {Pseudomonas aeruginosa PA01}
Probab=29.31 E-value=1.7e+02 Score=34.30 Aligned_cols=120 Identities=12% Similarity=0.159 Sum_probs=0.0
Q ss_pred HHHHHHHHhCCCCceEEEeec---cCCeEEEEeCCCCCCHH----HHHHHHHhc--CCccc------ccccCCcceeEEE
Q 042234 37 STTVEKALQAIPGVQNVRVAL---ATEAAEVHYDPKILNYN----QILAAIEDT--GFEAT------LISTGEDMSKIHL 101 (658)
Q Consensus 37 ~~~ve~~l~~~~gv~~~~v~~---~~~~~~v~~~~~~~~~~----~i~~~i~~~--Gy~~~------~~~~~~~~~~~~~ 101 (658)
...+|+.+++.||+.++.... ....+.+.+++. .+.+ ++.+.+.+. .++.. ..........+.+
T Consensus 62 ~~~iE~~l~~~~~v~~v~s~sg~~~~~~i~v~~~~~-~~~~~~~~~v~~~l~~~~~~lP~~~~~p~i~~~~~~~~~~~~~ 140 (1052)
T 2v50_A 62 VQVIEQQMNGIDNLRYISSESNSDGSMTITVTFEQG-TDPDIAQVQVQNKLQLATPLLPQEVQRQGIRVTKAVKNFLMVV 140 (1052)
T ss_dssp HHHHHTTCCSCTTEEEEECCEETTSEEEEEEEECSS-CCHHHHHHHHHHHHHHHGGGSCHHHHTTCCEEECEEEEEEEEE
T ss_pred HHHHHHHHcCCCCceEEEEEecCCCeEEEEEEEECC-CCHHHHHHHHHHHHHHHHhhCCCCCCCCeeEecCCCCcceEEE
Q ss_pred eeecCc--cch------hHHHHHhhhhcCCCceEEeecCCccEEEEEeCCC-----CCChhhHHHHHHh
Q 042234 102 QVDGIR--TDH------SMRMIENSLQALPGVHGIGVDSGVHKIAISYKPD-----MTGPRNFMKVIES 157 (658)
Q Consensus 102 ~v~gm~--c~~------c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~-----~~~~~~i~~~i~~ 157 (658)
.+.|-. -.. -.+.+++.|++.|||.+++++-....+.|..||. .++.+++.+.|+.
T Consensus 141 ~l~g~~~~~~~~~L~~~a~~~i~~~L~~i~gv~~v~~~g~~~~i~i~id~~kl~~~Gls~~~v~~~l~~ 209 (1052)
T 2v50_A 141 GVVSTDGSMTKEDLSNYIVSNIQDPLSRTKGVGDFQVFGSQYSMRIWLDPAKLNSYQLTPGDVSSAIQA 209 (1052)
T ss_dssp EEEESSTTSCHHHHHHHHHHHTHHHHHTSTTEEEEEESSCCEEEEEEECHHHHTTTTCCHHHHHHHHHH
T ss_pred EEEcCCCCCCHHHHHHHHHHHHHHHHhCCCCceEEEecCCcEEEEEEeCHHHHHHcCCCHHHHHHHHHh
No 123
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=28.71 E-value=35 Score=30.77 Aligned_cols=28 Identities=25% Similarity=0.417 Sum_probs=22.5
Q ss_pred chHhhhhcCCcEEEecCCCcccCCceeE
Q 042234 536 GQALESAHKVNCIVFDKTGTLTVGKPVV 563 (658)
Q Consensus 536 ~~~~e~lg~v~~i~~DKTGTLT~~~~~v 563 (658)
+...+.+..++.|+||--|||+.+...+
T Consensus 10 ~~~~~~~~~ik~vifD~DGTL~d~~~~~ 37 (189)
T 3mn1_A 10 QDLMQRGKAIKLAVFDVDGVLTDGRLYF 37 (189)
T ss_dssp HHHHHHHHTCCEEEECSTTTTSCSEEEE
T ss_pred HHHHHHHHhCCEEEEcCCCCcCCccEee
Confidence 3456677889999999999999986543
No 124
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=28.07 E-value=47 Score=25.12 Aligned_cols=51 Identities=12% Similarity=0.188 Sum_probs=32.7
Q ss_pred HHHHHHhcC-CcccccccCCcceeEEEeeecCccchhH---HHHHhhhh-cCCCceEEe
Q 042234 76 ILAAIEDTG-FEATLISTGEDMSKIHLQVDGIRTDHSM---RMIENSLQ-ALPGVHGIG 129 (658)
Q Consensus 76 i~~~i~~~G-y~~~~~~~~~~~~~~~~~v~gm~c~~c~---~~ie~~l~-~~~GV~~v~ 129 (658)
+...+...| -+.+...-+ ...++++..|- |.+|. ..||+.|+ ..|.|..|.
T Consensus 16 iRP~L~~dGGGdvelv~v~--~g~V~v~l~Ga-C~gc~Tlk~gIe~~L~~~vpei~~V~ 71 (74)
T 1th5_A 16 IRPYLAGTGGGGLQFLMIK--GPIVKVRLTGP-AAVVRTVRIAVSKKLREKIPSIQIVQ 71 (74)
T ss_dssp THHHHTTTTCCCCCCCEEE--TTEEEECCCSS-SSSSSSHHHHHHHHHHHHCTTCSEEE
T ss_pred HhHHHHhcCCCcEEEEEEe--CCEEEEEEecC-CcchHHHHHHHHHHHHHHCCCCcEEE
Confidence 455555556 555554432 24677777775 88883 46788887 678887764
No 125
>2lcj_A PAB POLC intein; hydrolase; NMR {Pyrococcus abyssi}
Probab=27.70 E-value=52 Score=29.69 Aligned_cols=24 Identities=13% Similarity=-0.042 Sum_probs=19.7
Q ss_pred eEEeeCCCCCCCCEEEEeCCCeee
Q 042234 349 EEEIDSRLIQRNDVIKIIPGAKVA 372 (658)
Q Consensus 349 ~~~i~~~~l~~GDii~v~~ge~iP 372 (658)
...+.+++|++||.|.+..++..|
T Consensus 103 ~~~~~A~eLk~GD~v~v~~~~~~~ 126 (185)
T 2lcj_A 103 FIEKRAFEVKEGDKVLVSELELVE 126 (185)
T ss_dssp EEEEEGGGCCTTCEEEECCCCCSC
T ss_pred EEEEEHHHCCCCCEEEEccccccc
Confidence 567899999999999998766443
No 126
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=26.48 E-value=1.8e+02 Score=23.08 Aligned_cols=53 Identities=11% Similarity=0.063 Sum_probs=39.6
Q ss_pred eEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCC
Q 042234 98 KIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGS 160 (658)
Q Consensus 98 ~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~ 160 (658)
...+.++|+.|+.-.-++.++|++++. ...+.|..|.. ...++|.+.+++.|+
T Consensus 26 ~~~LD~rGl~CP~Pvl~tkkaL~~l~~---------Ge~L~Vl~dd~-~a~~dI~~~~~~~G~ 78 (98)
T 1jdq_A 26 TKTLDVRGEVCPVPDVETKRALQNMKP---------GEILEVWIDYP-MSKERIPETVKKLGH 78 (98)
T ss_dssp CEEEECSSCCSSHHHHHHHHHHHTCCT---------TCEEEEEESSC-THHHHHHHHHHHSSC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCc-cHHHHHHHHHHHCCC
Confidence 356899999999999999999998731 12345555433 347889999999994
No 127
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=25.84 E-value=2.5e+02 Score=22.25 Aligned_cols=67 Identities=22% Similarity=0.213 Sum_probs=49.4
Q ss_pred ceEEEEEecCCCChhhHHHHHHHHhCCCCceEEEe-----eccCCeEEEEeCCCCCCHHHHHHHHHhcCCccc
Q 042234 21 TQLCRIGINGMTCTTCSTTVEKALQAIPGVQNVRV-----ALATEAAEVHYDPKILNYNQILAAIEDTGFEAT 88 (658)
Q Consensus 21 ~~~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v-----~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 88 (658)
..+..+.+--.+ ..-.-.+-+.+.+++|+..+++ |..+....++......+.+++.+.+++.|-..+
T Consensus 6 irRlVLDVlKPh-~p~i~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg~IH 77 (97)
T 2raq_A 6 LIRIVLDILKPH-EPIIPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSIH 77 (97)
T ss_dssp EEEEEEEEECCS-CSCHHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEEE
T ss_pred ceEEEEEecCCC-CCCHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEE
Confidence 455566666443 3344466778899999887766 456777788888888899999999999997654
No 128
>2y9j_Y Lipoprotein PRGK, protein PRGK; protein transport, type III secretion, IR1, inner membrane R C24-fold; 6.40A {Salmonella enterica subsp}
Probab=25.15 E-value=86 Score=27.93 Aligned_cols=34 Identities=24% Similarity=0.247 Sum_probs=25.3
Q ss_pred HHHHHhhhhcCCCceEEeecCC---------------ccEEEEEeCCCC
Q 042234 112 MRMIENSLQALPGVHGIGVDSG---------------VHKIAISYKPDM 145 (658)
Q Consensus 112 ~~~ie~~l~~~~GV~~v~v~~~---------------~~~~~V~~d~~~ 145 (658)
...+++.+..++||.+++|+.. +.++.|++.|+.
T Consensus 90 e~ELartI~~i~gV~~ArVhl~lP~~~~~f~~~~~~~sASV~l~~~~g~ 138 (170)
T 2y9j_Y 90 EQRLEQSLQTMEGVLSARVHISYDIDAGENGRPPKPVHLSALAVYERGS 138 (170)
T ss_dssp HHHHHHHHTTSTTEEEEEEEEEECCCCCBTTBCCCCEEEEEEEEECTTC
T ss_pred HHHHHHHHHcCCCeeEEEEEEEcCCCcCcccccCCCCcEEEEEEECCCC
Confidence 4567889999999999998654 245666666664
No 129
>2k1g_A Lipoprotein SPR; solution structure, bacterial lipoprotein, cysteine PEPT NPLC/P60 family, construct optimized, membrane, palmitate; NMR {Escherichia coli}
Probab=22.84 E-value=80 Score=26.92 Aligned_cols=22 Identities=9% Similarity=0.259 Sum_probs=17.5
Q ss_pred EEeeCCCCCCCCEEEEeCCCee
Q 042234 350 EEIDSRLIQRNDVIKIIPGAKV 371 (658)
Q Consensus 350 ~~i~~~~l~~GDii~v~~ge~i 371 (658)
..|+.++++|||+|..+.|..+
T Consensus 61 ~~V~~~~l~pGDLvFf~~~~~~ 82 (135)
T 2k1g_A 61 KSVSRSNLRTGDLVLFRAGSTG 82 (135)
T ss_dssp EEECGGGCCTTEEEEEEETTTE
T ss_pred cEecHHHccCCcEEEECCCCCC
Confidence 4578889999999999876543
No 130
>3pim_A Peptide methionine sulfoxide reductase; methionine-S-sulfoxide reductase, oxidoreductase; 1.90A {Saccharomyces cerevisiae} PDB: 3pil_A 3pin_B
Probab=22.62 E-value=60 Score=29.37 Aligned_cols=49 Identities=16% Similarity=0.314 Sum_probs=37.5
Q ss_pred hhhHHHHHHHHhCC--CCceEEEeeccCC-------------------------eEEEEeCCCCCCHHHHHHHHHh
Q 042234 34 TTCSTTVEKALQAI--PGVQNVRVALATE-------------------------AAEVHYDPKILNYNQILAAIED 82 (658)
Q Consensus 34 ~~C~~~ve~~l~~~--~gv~~~~v~~~~~-------------------------~~~v~~~~~~~~~~~i~~~i~~ 82 (658)
++|-|-+|....++ +||.++.+-.+.+ .+.|.||+...+.+++.+..-+
T Consensus 26 gGCFWg~E~~F~~l~g~GV~~t~~GYagG~~~~~n~~~~PtY~~Vc~g~TGHaEaV~V~yDp~~isy~~LL~~Ff~ 101 (187)
T 3pim_A 26 CGCFWGTEHMYRKYLNDRIVDCKVGYANGEESKKDSPSSVSYKRVCGGDTDFAEVLQVSYNPKVITLRELTDFFFR 101 (187)
T ss_dssp SSCHHHHHHHHHHHHGGGSSEEEEEEEEECCC---------CSCBTTBCTTCEEEEEEEECTTTSCHHHHHHHHTT
T ss_pred cCCchhhHHHHHHhcCCCeEEEEeeecCCcccCCCCCCCCchhhhccCCCCCeEEEEEEECCccCCHHHHHHHHHH
Confidence 56778888888888 8988877765444 2678899998998888887644
No 131
>4dx5_A Acriflavine resistance protein B; multidrug efflux protein, membrane protein, transpor; HET: LMT OCT D10 HEX D12 MIY C14 LMU DD9 UND GOL; 1.90A {Escherichia coli} PDB: 2hrt_A* 2gif_A* 4dx7_A* 4dx6_A* 3noc_A* 1oy6_A* 1oy9_A* 1oyd_A* 1oy8_A* 1oye_A 2rdd_A* 2w1b_A* 3d9b_A 2i6w_A* 3nog_A* 1t9x_A* 1t9t_A* 1t9v_A* 1t9w_A* 1t9u_A* ...
Probab=22.16 E-value=3.5e+02 Score=31.57 Aligned_cols=133 Identities=10% Similarity=0.171 Sum_probs=78.2
Q ss_pred EEEEecCCCChh----hHHHHHHHHhCCCCceEEEeec-cCC--eEEEEeCCCCCCHH----HHHHHHHhc--CCcccc-
Q 042234 24 CRIGINGMTCTT----CSTTVEKALQAIPGVQNVRVAL-ATE--AAEVHYDPKILNYN----QILAAIEDT--GFEATL- 89 (658)
Q Consensus 24 ~~~~i~gm~C~~----C~~~ve~~l~~~~gv~~~~v~~-~~~--~~~v~~~~~~~~~~----~i~~~i~~~--Gy~~~~- 89 (658)
+...-+|.+-.. -...+|+.+++++|+.++...- ..+ .+.+.++.. .+.+ ++.+.+.+. .++...
T Consensus 45 V~~~~pgas~~~ve~~vt~~iE~~l~~~~~v~~i~s~s~~~g~~~i~v~~~~~-~d~~~a~~~v~~~~~~~~~~lP~~~~ 123 (1057)
T 4dx5_A 45 ISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESG-TDADIAQVQVQNKLQLAMPLLPQEVQ 123 (1057)
T ss_dssp EEEECTTCCHHHHHHHTHHHHHHTCCSCTTEEEEEEEEETTSEEEEEEEECTT-CCHHHHHHHHHHHHHHHGGGSCHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHHHHHcCCCCcEEEEEEecCCCeEEEEEEEeCC-CCHHHHHHHHHHHHHHHHhhCCCccC
Confidence 445555655333 2356888899999999877654 223 445666655 3443 344444432 222100
Q ss_pred -----cccCCcceeEEEeeecC----cc---chh-HHHHHhhhhcCCCceEEeecCCccEEEEEeCCCC-----CChhhH
Q 042234 90 -----ISTGEDMSKIHLQVDGI----RT---DHS-MRMIENSLQALPGVHGIGVDSGVHKIAISYKPDM-----TGPRNF 151 (658)
Q Consensus 90 -----~~~~~~~~~~~~~v~gm----~c---~~c-~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~-----~~~~~i 151 (658)
........-..+.+.+- .- ..- .+.+++.|+++|||.++++.-....+.|..||.+ ++.+++
T Consensus 124 ~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~L~~~a~~~i~~~l~~i~gv~~v~~~g~~~~i~i~~d~~~l~~~glt~~~v 203 (1057)
T 4dx5_A 124 QQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAANMKDAISRTSGVGDVQLFGSQYAMRIWMNPNELNKFQLTPVDV 203 (1057)
T ss_dssp HHCCEEEEBCSSCSEEEEEEETTSCSCHHHHHHHHHHHTHHHHHTSTTEEEEEESSCCEEEEEEECHHHHHHTTCCHHHH
T ss_pred CCcceeccCCCcceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCCceEEEecCCcEEEEEEeCHHHHHHcCCCHHHH
Confidence 00011111233444332 11 122 3689999999999999998655567889999884 467889
Q ss_pred HHHHHh
Q 042234 152 MKVIES 157 (658)
Q Consensus 152 ~~~i~~ 157 (658)
.++|+.
T Consensus 204 ~~~l~~ 209 (1057)
T 4dx5_A 204 ITAIKA 209 (1057)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988885
No 132
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=22.12 E-value=2.3e+02 Score=22.39 Aligned_cols=14 Identities=21% Similarity=0.508 Sum_probs=7.5
Q ss_pred hhhhcCCCceEEee
Q 042234 117 NSLQALPGVHGIGV 130 (658)
Q Consensus 117 ~~l~~~~GV~~v~v 130 (658)
+.++++|||.++..
T Consensus 61 ~~I~~i~GVlst~l 74 (95)
T 2jsx_A 61 ESVRNVEGVLAVSL 74 (95)
T ss_dssp HHHTTSTTEEEEEE
T ss_pred HHHhcCCCccEEeE
Confidence 45556666655533
No 133
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=22.00 E-value=1.8e+02 Score=23.13 Aligned_cols=66 Identities=21% Similarity=0.199 Sum_probs=46.9
Q ss_pred eEEEEEecCCCChhhHHHHHHHHhCCCCceEEEee-----ccCCeEEEEeCCCCCCHHHHHHHHHhcCCccc
Q 042234 22 QLCRIGINGMTCTTCSTTVEKALQAIPGVQNVRVA-----LATEAAEVHYDPKILNYNQILAAIEDTGFEAT 88 (658)
Q Consensus 22 ~~~~~~i~gm~C~~C~~~ve~~l~~~~gv~~~~v~-----~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 88 (658)
.+..+.+--. -..-.-.+-+.+.+++||..+++. ..+....++......+.+++.+.+++.|-..+
T Consensus 7 RRlVLDVlKP-h~P~ivdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~GgvIH 77 (100)
T 3bpd_A 7 RRLVLDVLKP-HEPKTIVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVIH 77 (100)
T ss_dssp EEEEEEEEEE-SCSCHHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEEE
T ss_pred eEEEEEecCC-CCCCHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEE
Confidence 4455555533 333445667789999999887764 45666777777777889999999999997654
No 134
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=21.99 E-value=60 Score=29.94 Aligned_cols=25 Identities=16% Similarity=0.343 Sum_probs=20.3
Q ss_pred HhhhhcCCcEEEecCCCcccCCcee
Q 042234 538 ALESAHKVNCIVFDKTGTLTVGKPV 562 (658)
Q Consensus 538 ~~e~lg~v~~i~~DKTGTLT~~~~~ 562 (658)
..+.+..++.|+||--|||+.+...
T Consensus 42 l~~~~~~ik~viFDlDGTL~Ds~~~ 66 (211)
T 3ij5_A 42 VIQRAANIRLLICDVDGVMSDGLIY 66 (211)
T ss_dssp HHHHHTTCSEEEECCTTTTSSSEEE
T ss_pred HHHHHhCCCEEEEeCCCCEECCHHH
Confidence 3455677999999999999998753
No 135
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=21.86 E-value=2.3e+02 Score=22.40 Aligned_cols=53 Identities=9% Similarity=-0.004 Sum_probs=39.3
Q ss_pred eEEEeeecCccchhHHHHHhhhhcCCCceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCC
Q 042234 98 KIHLQVDGIRTDHSMRMIENSLQALPGVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGS 160 (658)
Q Consensus 98 ~~~~~v~gm~c~~c~~~ie~~l~~~~GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~ 160 (658)
...+..+|+.|+.-.-++.++|++++. ...+.|..|.. ...++|-+.+++.|+
T Consensus 27 ~~~LD~rGl~CP~PvlktkkaL~~l~~---------Ge~L~Vl~dd~-~a~~dIp~~~~~~G~ 79 (97)
T 1je3_A 27 DYRLDMVGEPCPYPAVATLEAMPQLKK---------GEILEVVSDCP-QSINNIPLDARNHGY 79 (97)
T ss_dssp EEEECSBCCSSSSSTHHHHHHTTTCCS---------SCEEEEEEBCS-SSSCHHHHHHHHHTC
T ss_pred CeEEeCCCCCCCHHHHHHHHHHHcCCC---------CCEEEEEECCc-chHHHHHHHHHHCCC
Confidence 456899999999999999999998731 12345555443 346789999999994
No 136
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=21.72 E-value=1.9e+02 Score=21.92 Aligned_cols=52 Identities=13% Similarity=0.224 Sum_probs=39.3
Q ss_pred eEEEeeecCccchhHHHHHhhhhcCC-CceEEeecCCccEEEEEeCCCCCChhhHHHHHHhcCC
Q 042234 98 KIHLQVDGIRTDHSMRMIENSLQALP-GVHGIGVDSGVHKIAISYKPDMTGPRNFMKVIESTGS 160 (658)
Q Consensus 98 ~~~~~v~gm~c~~c~~~ie~~l~~~~-GV~~v~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~ 160 (658)
...+..+|+.|+.-.-+..++|++++ | ..+.|..|.. ...+++.+..++.||
T Consensus 10 ~~~lD~rGl~CP~Pvl~~kkal~~l~~G----------~~l~V~~dd~-~a~~di~~~~~~~G~ 62 (82)
T 3lvj_C 10 DHTLDALGLRCPEPVMMVRKTVRNMQPG----------ETLLIIADDP-ATTRDIPGFCTFMEH 62 (82)
T ss_dssp SEEEECTTCCTTHHHHHHHHHHHTSCTT----------CEEEEEECCT-THHHHHHHHHHHTTC
T ss_pred CEEEECCCCCCCHHHHHHHHHHHhCCCC----------CEEEEEECCc-cHHHHHHHHHHHCCC
Confidence 45788999999999999999999873 3 2345554433 346789999999993
No 137
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=21.33 E-value=1.6e+02 Score=23.24 Aligned_cols=53 Identities=17% Similarity=0.347 Sum_probs=41.7
Q ss_pred hHHHHHHHHhCCCCceEEEee-----ccCCeEEEEeCCCCCCHHHHHHHHHhcCCccc
Q 042234 36 CSTTVEKALQAIPGVQNVRVA-----LATEAAEVHYDPKILNYNQILAAIEDTGFEAT 88 (658)
Q Consensus 36 C~~~ve~~l~~~~gv~~~~v~-----~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 88 (658)
-.-.+-+.+.+++|+..++.. ..+....++......+.+++.+.+++.|-..+
T Consensus 19 ~ivd~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg~IH 76 (96)
T 2x3d_A 19 SIVDLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGCAIH 76 (96)
T ss_dssp CHHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEE
Confidence 344667789999999887764 45667777777777899999999999997654
No 138
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=20.79 E-value=43 Score=29.69 Aligned_cols=25 Identities=28% Similarity=0.494 Sum_probs=19.9
Q ss_pred hhhhcCCcEEEecCCCcccCCceeE
Q 042234 539 LESAHKVNCIVFDKTGTLTVGKPVV 563 (658)
Q Consensus 539 ~e~lg~v~~i~~DKTGTLT~~~~~v 563 (658)
++.+..++.|+||--|||+.+...+
T Consensus 6 ~~~~~~~k~vifD~DGTL~d~~~~~ 30 (176)
T 3mmz_A 6 LPTAEDIDAVVLDFDGTQTDDRVLI 30 (176)
T ss_dssp CCCGGGCSEEEECCTTTTSCSCCEE
T ss_pred hhhHhcCCEEEEeCCCCcCcCCEee
Confidence 3456678999999999999976643
Done!