Your job contains 1 sequence.
>042235
MVAVGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFY
TFGHSSVDAVLDAFVNNRAPEAADKELVRLGISMFNEVKDLELYDKKISKAIKSDGNLER
EGFWEDYEKLGNSDESIGELGVIVDKLAKAKEKAILRLTDLLASPQVSNSGSCSASASAS
ASNVGCASDEQFKFGNNYACGERFKFGNNHIHEDDNKKEFIKFGT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042235
(225 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2825756 - symbol:AGL97 "AGAMOUS-like 97" speci... 181 2.5e-16 2
TAIR|locus:2158039 - symbol:AT5G49420 species:3702 "Arabi... 171 7.5e-15 2
TAIR|locus:2184427 - symbol:AGL99 "AGAMOUS-like 99" speci... 183 6.5e-14 1
TAIR|locus:2159848 - symbol:AT5G38620 species:3702 "Arabi... 179 2.5e-13 1
TAIR|locus:2206016 - symbol:AGL55 "AGAMOUS-like 55" speci... 173 3.4e-13 1
TAIR|locus:2181226 - symbol:AGL39 "AGAMOUS-like 39" speci... 163 1.0e-11 1
TAIR|locus:2206320 - symbol:AGL23 "AGAMOUS-like 23" speci... 159 1.0e-11 1
TAIR|locus:2157874 - symbol:AGL83 "AGAMOUS-like 83" speci... 157 3.7e-11 1
TAIR|locus:2023741 - symbol:AT1G48150 species:3702 "Arabi... 156 7.2e-11 1
TAIR|locus:2206081 - symbol:AGL56 "AGAMOUS-like-56" speci... 149 1.2e-10 1
TAIR|locus:2047304 - symbol:AGL61 "AGAMOUS-like 61" speci... 149 2.2e-10 1
TAIR|locus:2175188 - symbol:AGL62 "AGAMOUS-like 62" speci... 147 1.7e-09 1
TAIR|locus:2184118 - symbol:FLC "FLOWERING LOCUS C" speci... 131 1.3e-07 1
TAIR|locus:4010713489 - symbol:AGL64 "AGAMOUS-like 64" sp... 129 1.3e-07 1
TAIR|locus:2025386 - symbol:AGL28 "AGAMOUS-like 28" speci... 133 2.6e-07 1
TAIR|locus:2115420 - symbol:AT4G36590 species:3702 "Arabi... 132 3.8e-07 1
TAIR|locus:2144355 - symbol:MAF5 "MADS AFFECTING FLOWERIN... 129 4.0e-07 1
TAIR|locus:2102871 - symbol:AGL79 "AGAMOUS-like 79" speci... 123 4.9e-07 2
UNIPROTKB|Q6EU39 - symbol:MADS6 "MADS-box transcription f... 118 5.1e-07 2
TAIR|locus:2057741 - symbol:AGL33 "AGAMOUS-like 33" speci... 114 8.8e-07 1
UNIPROTKB|Q7XUN2 - symbol:MADS17 "MADS-box transcription ... 120 1.0e-06 2
TAIR|locus:2043600 - symbol:AGL6 "AT2G45650" species:3702... 116 1.2e-06 2
TAIR|locus:2103415 - symbol:AGL91 "AGAMOUS-like 91" speci... 121 1.6e-06 1
TAIR|locus:2202420 - symbol:AGL102 "AGAMOUS-like 102" spe... 122 1.7e-06 1
UNIPROTKB|D2T2G0 - symbol:gsqua2 "GSQUA2 protein" species... 124 3.8e-06 1
TAIR|locus:2195798 - symbol:AT1G17310 species:3702 "Arabi... 122 4.9e-06 1
TAIR|locus:2033273 - symbol:AP1 "AT1G69120" species:3702 ... 103 7.2e-06 2
UNIPROTKB|Q0D4T4 - symbol:MADS18 "MADS-box transcription ... 111 9.2e-06 2
TAIR|locus:2032537 - symbol:AGL59 "AGAMOUS-like 59" speci... 114 2.4e-05 1
TAIR|locus:2025282 - symbol:MAF1 "MADS AFFECTING FLOWERIN... 115 2.7e-05 1
UNIPROTKB|Q6EUV6 - symbol:grcd3 "MADS domain protein" spe... 111 2.9e-05 2
TAIR|locus:2177749 - symbol:AGL31 "AGAMOUS-like 31" speci... 114 3.6e-05 1
TAIR|locus:2040819 - symbol:AGL29 "AGAMOUS-like 29" speci... 110 5.7e-05 1
UNIPROTKB|Q10CQ1 - symbol:MADS14 "MADS-box transcription ... 103 8.0e-05 2
TAIR|locus:2082618 - symbol:AGL16 "AGAMOUS-like 16" speci... 113 9.9e-05 1
TAIR|locus:2121070 - symbol:AGL21 "AT4G37940" species:370... 112 0.00012 1
TAIR|locus:2032372 - symbol:SEP3 "SEPALLATA3" species:370... 112 0.00015 1
TAIR|locus:2144345 - symbol:MAF3 "MADS AFFECTING FLOWERIN... 109 0.00016 1
UNIPROTKB|Q9ZS30 - symbol:gaga1 "MADS-box protein, GAGA1"... 112 0.00017 1
TAIR|locus:2173522 - symbol:AGL8 "AGAMOUS-like 8" species... 111 0.00018 1
UNIPROTKB|O65874 - symbol:MTF1 "MADS-box transcription fa... 111 0.00019 1
UNIPROTKB|Q9FST1 - symbol:grcd1 "MADS box protein" specie... 110 0.00024 1
UNIPROTKB|Q43616 - symbol:fbp7 "Floral binding protein nu... 109 0.00026 1
TAIR|locus:2034949 - symbol:AGL65 "AGAMOUS-like 65" speci... 113 0.00027 1
UNIPROTKB|Q9ZS25 - symbol:gsqua1 "MADS-box protein, GSQUA... 108 0.00028 1
TAIR|locus:2127213 - symbol:AGL19 "AGAMOUS-like 19" speci... 108 0.00032 1
UNIPROTKB|Q9ATE9 - symbol:FBP20 "MADS-box transcription f... 97 0.00033 2
UNIPROTKB|D2T2F9 - symbol:grcd5 "GRCD5 protein" species:1... 109 0.00036 1
UNIPROTKB|Q6Q9I2 - symbol:MADS15 "MADS-box transcription ... 109 0.00041 1
UNIPROTKB|Q03489 - symbol:FBP2 "Agamous-like MADS-box pro... 108 0.00042 1
UNIPROTKB|Q5K4R0 - symbol:MADS47 "MADS-box transcription ... 108 0.00044 1
TAIR|locus:2098826 - symbol:AGL13 "AGAMOUS-like 13" speci... 93 0.00045 2
TAIR|locus:2030621 - symbol:AGL104 "AGAMOUS-like 104" spe... 110 0.00048 1
TAIR|locus:505006709 - symbol:AGL42 "AGAMOUS-like 42" spe... 106 0.00050 1
UNIPROTKB|Q2QW53 - symbol:MADS13 "MADS-box transcription ... 108 0.00055 1
UNIPROTKB|Q40885 - symbol:AG1 "Floral homeotic protein AG... 107 0.00056 1
UNIPROTKB|Q9ZS29 - symbol:GAGA2 "MADS-box protein, GAGA2"... 107 0.00058 1
UNIPROTKB|Q0J466 - symbol:MADS7 "MADS-box transcription f... 107 0.00060 1
TAIR|locus:2029411 - symbol:AGL67 "AGAMOUS-like 67" speci... 107 0.00061 1
SGD|S000004646 - symbol:MCM1 "Transcription factor involv... 108 0.00062 1
TAIR|locus:2029386 - symbol:AGL66 "AGAMOUS-like 66" speci... 109 0.00063 1
TAIR|locus:2066050 - symbol:AGL17 "AGAMOUS-like 17" speci... 106 0.00063 1
UNIPROTKB|H0YKY6 - symbol:MEF2A "Myocyte-specific enhance... 89 0.00067 1
UNIPROTKB|H0YM62 - symbol:MEF2A "Myocyte-specific enhance... 89 0.00067 1
UNIPROTKB|I3L7L3 - symbol:LOC100738718 "Uncharacterized p... 89 0.00067 1
SGD|S000004645 - symbol:ARG80 "Transcription factor invol... 102 0.00084 1
TAIR|locus:2102990 - symbol:AGL57 "AGAMOUS-like 57" speci... 104 0.00086 1
UNIPROTKB|D6RB91 - symbol:MEF2C "Myocyte-specific enhance... 88 0.00087 1
UNIPROTKB|D6RG14 - symbol:MEF2C "Myocyte-specific enhance... 88 0.00087 1
UNIPROTKB|D6RJA7 - symbol:MEF2C "Myocyte-specific enhance... 88 0.00087 1
>TAIR|locus:2825756 [details] [associations]
symbol:AGL97 "AGAMOUS-like 97" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
eggNOG:KOG0014 EMBL:AC083835 EMBL:AB493500 IPI:IPI00539277
PIR:E96511 RefSeq:NP_175144.1 UniGene:At.65984
ProteinModelPortal:Q9C633 SMR:Q9C633 IntAct:Q9C633 STRING:Q9C633
EnsemblPlants:AT1G46408.1 GeneID:841112 KEGG:ath:AT1G46408
TAIR:At1g46408 HOGENOM:HOG000033848 PhylomeDB:Q9C633
ProtClustDB:CLSN2681906 Genevestigator:Q9C633 Uniprot:Q9C633
Length = 266
Score = 181 (68.8 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 38/78 (48%), Positives = 57/78 (73%)
Query: 6 KRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTT---FYTF 62
KR+I +++ K RAVSFSKRR GL +KA+E CL + +++A+ +++PVS + FY+F
Sbjct: 5 KRKIAIEKIQNKNPRAVSFSKRRKGLYSKASELCLLSDAEIAI-IATPVSSNSNAAFYSF 63
Query: 63 GHSSVDAVLDAFVNNRAP 80
GHSSVD V+ AF+ N+ P
Sbjct: 64 GHSSVDNVVAAFLANQRP 81
Score = 35 (17.4 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 196 NNYACGERFKFGNNHIHEDDNKKE 219
N C ERF + + + + +N +E
Sbjct: 78 NQRPCDERFWWEDESLLKSENLEE 101
>TAIR|locus:2158039 [details] [associations]
symbol:AT5G49420 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PROSITE:PS50066 SMART:SM00432 GO:GO:0005634
EMBL:CP002688 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
SUPFAM:SSF55455 HSSP:Q02078 EMBL:AY141239 EMBL:DQ447056
IPI:IPI00521941 RefSeq:NP_199753.3 UniGene:At.64280
ProteinModelPortal:Q7X9H5 SMR:Q7X9H5 IntAct:Q7X9H5 STRING:Q7X9H5
PRIDE:Q7X9H5 EnsemblPlants:AT5G49420.1 GeneID:835002
KEGG:ath:AT5G49420 TAIR:At5g49420 PhylomeDB:Q7X9H5
ProtClustDB:CLSN2687118 Genevestigator:Q7X9H5 Uniprot:Q7X9H5
Length = 334
Score = 171 (65.3 bits), Expect = 7.5e-15, Sum P(2) = 7.5e-15
Identities = 39/100 (39%), Positives = 65/100 (65%)
Query: 1 MVAVG--KRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDT- 57
MV G KR+I ++ ++ V+ +KRR GL +KA++ CL + +Q+A+L + P S++
Sbjct: 1 MVKKGGTKRKIAIETIQKRDSLRVTCTKRREGLYSKASQLCLLSDAQIAILATPPSSESN 60
Query: 58 -TFYTFGHSSVDAVLDAFVNNRAPEAADKELVR--LGISM 94
+FY+FGHSSVDAV+ AF++ + P D + R +GI +
Sbjct: 61 VSFYSFGHSSVDAVVSAFLSGQRPVPKDNKETREDVGICL 100
Score = 40 (19.1 bits), Expect = 7.5e-15, Sum P(2) = 7.5e-15
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 122 GFWEDYEKLGNSDESIGELGVIVDKLAKA-KEKAILRLTDLLASPQ 166
GFW + E L S E+ E+ +D + + LR + LA Q
Sbjct: 108 GFWWNDESLARS-ENPQEISEAIDSMRTLLRNLKELRADEALACNQ 152
>TAIR|locus:2184427 [details] [associations]
symbol:AGL99 "AGAMOUS-like 99" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
HOGENOM:HOG000033848 ProtClustDB:CLSN2681906 EMBL:AL162875
EMBL:DQ056669 IPI:IPI00538160 PIR:T48460 RefSeq:NP_196084.1
UniGene:At.54720 ProteinModelPortal:Q9LZ61 SMR:Q9LZ61 IntAct:Q9LZ61
STRING:Q9LZ61 EnsemblPlants:AT5G04640.1 GeneID:830341
KEGG:ath:AT5G04640 TAIR:At5g04640 eggNOG:NOG275504 OMA:RDAMDSM
PhylomeDB:Q9LZ61 Genevestigator:Q9LZ61 Uniprot:Q9LZ61
Length = 322
Score = 183 (69.5 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 48/133 (36%), Positives = 80/133 (60%)
Query: 6 KRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVS---DTTFYTF 62
KR+I ++ + K+ RAV+FSKR GL +KA++ CL + +Q+A+ +++PVS + +FYTF
Sbjct: 5 KRKISIELIEKKDSRAVAFSKRSRGLYSKASDLCLLSDAQIAI-IATPVSSKSNVSFYTF 63
Query: 63 GHSSVDAVLDAFVNNRAPEAA---DKELVRLGISMFNEVKDLELYDKKISKAIKSDGNLE 119
GHSSVD V+ AF+ N+ P D +S ++++L +SK +K +L+
Sbjct: 64 GHSSVDNVVAAFLTNQRPREGLGLDYWWEDERLSKSEDLEELRDAMDSMSKMLKDLKDLQ 123
Query: 120 RE-GFWEDYEKLG 131
+ ED +K G
Sbjct: 124 NQRDCEEDVKKKG 136
>TAIR|locus:2159848 [details] [associations]
symbol:AT5G38620 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PROSITE:PS50066 SMART:SM00432 GO:GO:0005634
EMBL:AB005231 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
eggNOG:KOG0014 HOGENOM:HOG000033848 ProtClustDB:CLSN2687118
EMBL:AY141237 IPI:IPI00535170 RefSeq:NP_198678.1 UniGene:At.64261
ProteinModelPortal:Q9FFV9 SMR:Q9FFV9 IntAct:Q9FFV9 STRING:Q9FFV9
EnsemblPlants:AT5G38620.1 GeneID:833852 KEGG:ath:AT5G38620
TAIR:At5g38620 PhylomeDB:Q9FFV9 Genevestigator:Q9FFV9
Uniprot:Q9FFV9
Length = 349
Score = 179 (68.1 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 37/88 (42%), Positives = 60/88 (68%)
Query: 1 MVAVGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVS--DTT 58
MV KR+I ++ ++ V+ +KRR GL +KA++ CL + +Q+A+L + P S D +
Sbjct: 1 MVKGTKRKIAIETIQKRDSLRVTCTKRRKGLYSKASQLCLLSDAQIAILATPPSSESDVS 60
Query: 59 FYTFGHSSVDAVLDAFVNNRAPEAADKE 86
FY+FGHSSVDAV+ AF++ + P +A K+
Sbjct: 61 FYSFGHSSVDAVVSAFLSGKRPVSAPKD 88
>TAIR|locus:2206016 [details] [associations]
symbol:AGL55 "AGAMOUS-like 55" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC018908 SUPFAM:SSF55455
HSSP:Q02078 IPI:IPI00522164 PIR:F96634 RefSeq:NP_176288.1
UniGene:At.64874 ProteinModelPortal:Q9C960 SMR:Q9C960 IntAct:Q9C960
STRING:Q9C960 EnsemblPlants:AT1G60920.1 GeneID:842383
KEGG:ath:AT1G60920 TAIR:At1g60920 eggNOG:NOG284347
HOGENOM:HOG000152226 OMA:AFDRLEN PhylomeDB:Q9C960
ProtClustDB:CLSN2681823 Genevestigator:Q9C960 Uniprot:Q9C960
Length = 191
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 39/95 (41%), Positives = 62/95 (65%)
Query: 6 KRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTR-SQLALLVS--SPVSDTTFYTF 62
KR+I +KR + K RAV+F+KR+ GL +KA+E CL + +Q+A+L + S S +FY+F
Sbjct: 5 KRKIEMKRIEDKNVRAVAFTKRKSGLFHKASELCLLSPGTQIAILATPLSSHSHASFYSF 64
Query: 63 GHSSVDAVLDAFVNNRAPEAADKELVRLGISMFNE 97
GHSSVD V+ + ++N+ P + R G+ + E
Sbjct: 65 GHSSVDHVVSSLLHNQHPSLPTNQDNRSGLGFWWE 99
>TAIR|locus:2181226 [details] [associations]
symbol:AGL39 "AGAMOUS-like 39" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PROSITE:PS50066 SMART:SM00432 GO:GO:0005634
EMBL:CP002688 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
SUPFAM:SSF55455 IPI:IPI00527457 RefSeq:NP_198065.2 UniGene:At.30824
EnsemblPlants:AT5G27130.1 GeneID:832771 KEGG:ath:AT5G27130
Uniprot:F4K2U3
Length = 306
Score = 163 (62.4 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 34/77 (44%), Positives = 53/77 (68%)
Query: 6 KRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPV-SDTTFYTF-G 63
KR+I +K+R+TKEQRAV+ SKRR + +KAA+ CL + + +A+ V+SP S Y+F G
Sbjct: 14 KRKIEIKKRETKEQRAVTCSKRRQTVFSKAADLCLISGANIAVFVTSPSDSSDVVYSFSG 73
Query: 64 HSSVDAVLDAFVNNRAP 80
+SS + D ++N + P
Sbjct: 74 YSSAYEIADCYLNRKPP 90
>TAIR|locus:2206320 [details] [associations]
symbol:AGL23 "AGAMOUS-like 23" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009553 "embryo
sac development" evidence=IMP] [GO:0009658 "chloroplast
organization" evidence=IMP] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC004512 GO:GO:0009658 eggNOG:COG5068
SUPFAM:SSF55455 HSSP:Q02078 HOGENOM:HOG000238700 GO:GO:0009553
EMBL:AY141230 IPI:IPI00536845 PIR:T02359 RefSeq:NP_176715.1
UniGene:At.35891 ProteinModelPortal:O80807 SMR:O80807 IntAct:O80807
STRING:O80807 EnsemblPlants:AT1G65360.1 GeneID:842846
KEGG:ath:AT1G65360 TAIR:At1g65360 InParanoid:O80807 OMA:QNERENE
PhylomeDB:O80807 ProtClustDB:CLSN2679619 ArrayExpress:O80807
Genevestigator:O80807 Uniprot:O80807
Length = 226
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 49/161 (30%), Positives = 79/161 (49%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+R++ + + + V+FSKR+ GL KA+E+C +++A++V SP ++FG
Sbjct: 6 LGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKV--FSFG 63
Query: 64 HSSVDAVLDAF---VNNRAPEAADKELVRLGISMFN----EVK-DLELYDK-KISKAIKS 114
H +VD +LD F V D+ +L + M N EVK ++E K K S+A
Sbjct: 64 HPNVDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQNE 123
Query: 115 DGNLEREGFWEDYEKLGNSDESIGELGVIVDKLAKAKEKAI 155
N E +W N +S + V+ D EKAI
Sbjct: 124 RENENAEEWWSKSPLELNLSQSTCMIRVLKDLKKIVDEKAI 164
>TAIR|locus:2157874 [details] [associations]
symbol:AGL83 "AGAMOUS-like 83" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PROSITE:PS50066 SMART:SM00432 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 eggNOG:KOG0014 EMBL:AB023033
IPI:IPI00518668 RefSeq:NP_199760.1 UniGene:At.55456
ProteinModelPortal:Q9FGZ5 SMR:Q9FGZ5 IntAct:Q9FGZ5 STRING:Q9FGZ5
EnsemblPlants:AT5G49490.1 GeneID:835009 KEGG:ath:AT5G49490
TAIR:At5g49490 PhylomeDB:Q9FGZ5 Genevestigator:Q9FGZ5
Uniprot:Q9FGZ5
Length = 285
Score = 157 (60.3 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 36/100 (36%), Positives = 64/100 (64%)
Query: 1 MVAVG--KRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDT- 57
MV G KR+I ++ + V+ +KRR GL +KA++ CL + +Q+A+L + P S++
Sbjct: 39 MVKKGGTKRKIAIETIQKSDYLRVTCTKRREGLFSKASQLCLLSDAQIAILATPPTSESN 98
Query: 58 -TFYTFGHSSVDAVLDAFVNNR--APEAADKELVRLGISM 94
+FY+FGHSSVDAV+ +F++ + P D + +R +++
Sbjct: 99 ISFYSFGHSSVDAVVSSFLSGQRCVPLQEDTKEMREDVAI 138
>TAIR|locus:2023741 [details] [associations]
symbol:AT1G48150 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PROSITE:PS50066 SMART:SM00432 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 EMBL:AC023673 HOGENOM:HOG000152178
ProtClustDB:CLSN2682189 IPI:IPI00532181 PIR:F96521
RefSeq:NP_175249.1 UniGene:At.52071 ProteinModelPortal:Q9LNG8
SMR:Q9LNG8 IntAct:Q9LNG8 STRING:Q9LNG8 EnsemblPlants:AT1G48150.1
GeneID:841234 KEGG:ath:AT1G48150 TAIR:At1g48150 OMA:RSVACSK
PhylomeDB:Q9LNG8 ArrayExpress:Q9LNG8 Genevestigator:Q9LNG8
Uniprot:Q9LNG8
Length = 323
Score = 156 (60.0 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 31/77 (40%), Positives = 55/77 (71%)
Query: 6 KRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDT-TFYTF-G 63
KR+I +++R TK+QR+V+ SKRR L +KAA+ CL + + +A+ V+SP ++ Y+F G
Sbjct: 17 KRKIEIEKRMTKQQRSVACSKRRPTLFSKAADLCLLSGANIAVFVTSPDENSDVVYSFSG 76
Query: 64 HSSVDAVLDAFVNNRAP 80
+S ++D ++NN++P
Sbjct: 77 YSHASEIVDCYLNNKSP 93
>TAIR|locus:2206081 [details] [associations]
symbol:AGL56 "AGAMOUS-like-56" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC018908 SUPFAM:SSF55455
HOGENOM:HOG000152226 ProtClustDB:CLSN2681823 IPI:IPI00546893
PIR:C96634 RefSeq:NP_176285.1 UniGene:At.52294
ProteinModelPortal:Q9C963 SMR:Q9C963 IntAct:Q9C963 STRING:Q9C963
EnsemblPlants:AT1G60880.1 GeneID:842380 KEGG:ath:AT1G60880
TAIR:At1g60880 eggNOG:NOG309414 OMA:ANQDNRS PhylomeDB:Q9C963
Genevestigator:Q9C963 Uniprot:Q9C963
Length = 201
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 36/112 (32%), Positives = 69/112 (61%)
Query: 6 KRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRT-RSQLALLVSSPVSDT--TFYTF 62
K +I +K+ K + V+F+KRR GL KA++ CL + +Q+A+L + S + +FY+F
Sbjct: 5 KTKIEIKKIINKPAKTVAFTKRREGLFRKASQLCLLSPATQIAILAAPMTSKSHASFYSF 64
Query: 63 GHSSVDAVLDAFVNNRAPEAADKELVRLGISMFNEVKDLELYD--KKISKAI 112
GHSSVD V+ + + + P A+++ R G+ + E K ++ + +++ +A+
Sbjct: 65 GHSSVDNVVSSLLYDHPPLTANQDN-RSGLGFWWEDKRFDVSENVEELKEAV 115
>TAIR|locus:2047304 [details] [associations]
symbol:AGL61 "AGAMOUS-like 61" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009559 "embryo sac central cell
differentiation" evidence=IMP] [GO:0043078 "polar nucleus"
evidence=IDA] [GO:0009612 "response to mechanical stimulus"
evidence=RCA] [GO:0019722 "calcium-mediated signaling"
evidence=RCA] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
SUPFAM:SSF55455 HSSP:Q02078 EMBL:AC006585 EMBL:DQ056542
EMBL:EU836691 IPI:IPI00545091 PIR:B84641 RefSeq:NP_850058.1
UniGene:At.52900 ProteinModelPortal:Q4PSU4 SMR:Q4PSU4 IntAct:Q4PSU4
STRING:Q4PSU4 EnsemblPlants:AT2G24840.1 GeneID:817021
KEGG:ath:AT2G24840 GeneFarm:3717 TAIR:At2g24840 eggNOG:NOG244091
HOGENOM:HOG000238700 InParanoid:Q4PSU4 OMA:AASCELN PhylomeDB:Q4PSU4
ProtClustDB:CLSN2918089 ArrayExpress:Q4PSU4 Genevestigator:Q4PSU4
GO:GO:0043078 GO:GO:0009559 Uniprot:Q4PSU4
Length = 264
Score = 149 (57.5 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 31/86 (36%), Positives = 54/86 (62%)
Query: 3 AVGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTF 62
++G+++IP+ + + R V+FSKRR GL KA+E C +++ ++V SP ++F
Sbjct: 61 SIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKP--FSF 118
Query: 63 GHSSVDAVLDAFVN-NRAPEAADKEL 87
GH SV++VLD +V+ N A ++L
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQL 144
>TAIR|locus:2175188 [details] [associations]
symbol:AGL62 "AGAMOUS-like 62" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009960 "endosperm
development" evidence=IMP] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
HOGENOM:HOG000238700 EMBL:AY141236 EMBL:EU493093 EMBL:AB011483
IPI:IPI00517886 IPI:IPI00520610 RefSeq:NP_200852.1 UniGene:At.29160
ProteinModelPortal:Q9FKK2 SMR:Q9FKK2 IntAct:Q9FKK2 STRING:Q9FKK2
EnsemblPlants:AT5G60440.1 GeneID:836165 KEGG:ath:AT5G60440
GeneFarm:3728 TAIR:At5g60440 eggNOG:NOG311592 InParanoid:Q9FKK2
OMA:NISEYEH PhylomeDB:Q9FKK2 ProtClustDB:CLSN2916398
Genevestigator:Q9FKK2 GO:GO:0009960 Uniprot:Q9FKK2
Length = 299
Score = 147 (56.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 40/142 (28%), Positives = 76/142 (53%)
Query: 5 GKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFGH 64
G+++I + + + V+FSKRR GL KA+E C +++A++V SP ++FGH
Sbjct: 7 GRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSP--GRKVFSFGH 64
Query: 65 SSVDAVLDAFVNNRAPEAADKELVRLGISMFNE-VKDLELYDKKISKAIKSDGNL--ERE 121
+VD+V+D F+NN ++L + N V+DL + ++ ++++ E +
Sbjct: 65 PNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYDELK 124
Query: 122 GFWEDYEKLGNS-DESIGELGV 142
E + LGN ++ + EL +
Sbjct: 125 KIREKTKALGNWWEDPVEELAL 146
>TAIR|locus:2184118 [details] [associations]
symbol:FLC "FLOWERING LOCUS C" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA;TAS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009910 "negative regulation of flower
development" evidence=IMP] [GO:0010048 "vernalization response"
evidence=IEP;RCA] [GO:0009266 "response to temperature stimulus"
evidence=IMP] [GO:0042752 "regulation of circadian rhythm"
evidence=IMP] [GO:0043234 "protein complex" evidence=IDA]
[GO:0043481 "anthocyanin accumulation in tissues in response to UV
light" evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043234 GO:GO:0030154 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0042752 eggNOG:COG5068 HOGENOM:HOG000155301
SUPFAM:SSF55455 GO:GO:0009908 GO:GO:0009910 GO:GO:0010048
ProtClustDB:CLSN2686365 EMBL:AL356332 EMBL:AF116527 EMBL:AF116528
IPI:IPI00542762 PIR:T50018 RefSeq:NP_196576.1 UniGene:At.1629
UniGene:At.75671 ProteinModelPortal:Q9S7Q7 SMR:Q9S7Q7
DIP:DIP-51640N IntAct:Q9S7Q7 STRING:Q9S7Q7 PaxDb:Q9S7Q7
PRIDE:Q9S7Q7 EnsemblPlants:AT5G10140.1 GeneID:830878
KEGG:ath:AT5G10140 GeneFarm:3548 TAIR:At5g10140 InParanoid:Q9S7Q7
OMA:GAEAEME PhylomeDB:Q9S7Q7 Genevestigator:Q9S7Q7 Uniprot:Q9S7Q7
Length = 196
Score = 131 (51.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 49/168 (29%), Positives = 84/168 (50%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G++++ +KR + K R V+FSKRR+GL+ KA + + + +ALLV S ++ G
Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 60
Query: 64 HSSVDAVLDAFVNNRAPE--AADKELVRLGISMFNEVKDLELYDKKIS----KAIKSDGN 117
+ V +LD + A + A D + L E+ LEL D K+ K + D
Sbjct: 61 DNLVK-ILDRYGKQHADDLKALDHQSKALNYGSHYEL--LELVDSKLVGSNVKNVSIDAL 117
Query: 118 LEREGFWEDYEKLGNSDESIGELGV-IVDKLAKAKEKAILRLTDLLAS 164
++ E E + + ++ EL + +V+ L K KEK + +LAS
Sbjct: 118 VQLEEHLETALSVTRAKKT--ELMLKLVENL-KEKEKMLKEENQVLAS 162
>TAIR|locus:4010713489 [details] [associations]
symbol:AGL64 "AGAMOUS-like 64" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066
SMART:SM00432 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455
HSSP:P11831 HOGENOM:HOG000238700 EMBL:AY141244 IPI:IPI00852269
RefSeq:NP_001077625.1 UniGene:At.40641 ProteinModelPortal:Q7XJK9
SMR:Q7XJK9 IntAct:Q7XJK9 STRING:Q7XJK9 EnsemblPlants:AT1G29962.1
GeneID:5007741 KEGG:ath:AT1G29962 TAIR:At1g29962 eggNOG:NOG321251
OMA:NEDAWWK PhylomeDB:Q7XJK9 ProtClustDB:CLSN2679626
Genevestigator:Q7XJK9 Uniprot:Q7XJK9
Length = 185
Score = 129 (50.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 35/119 (29%), Positives = 61/119 (51%)
Query: 5 GKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFGH 64
GK+RI +K+ + E R V+ SKRR+G+ K +E + +++A L S YTFG
Sbjct: 8 GKQRINIKKIEKDEDRLVTLSKRRNGIYTKLSELSILCGAEVAFLGYSCSGKP--YTFGS 65
Query: 65 SSVDAVLDAFVNNRAPEAADKELVRLGISMFNEVKDLEL---YDKKISKAIKSDGNLER 120
S AV + F+N A ++ L R ++ + K EL Y++ + + + L++
Sbjct: 66 PSFQAVAERFLNGEASSSSSSSLQRSVMNAHQQAKIQELCKVYNRLVEEITVEEVKLKK 124
>TAIR|locus:2025386 [details] [associations]
symbol:AGL28 "AGAMOUS-like 28" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GO:GO:0005634 EMBL:AC061957 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
ProtClustDB:CLSN2679619 EMBL:AY141231 EMBL:DQ446218 EMBL:AB493420
IPI:IPI00522692 PIR:H86145 RefSeq:NP_171660.1 UniGene:At.42643
ProteinModelPortal:Q9LMM8 SMR:Q9LMM8 IntAct:Q9LMM8 STRING:Q9LMM8
EnsemblPlants:AT1G01530.1 GeneID:837142 KEGG:ath:AT1G01530
TAIR:At1g01530 InParanoid:Q9LMM8 OMA:KMTNESN PhylomeDB:Q9LMM8
ArrayExpress:Q9LMM8 Genevestigator:Q9LMM8 Uniprot:Q9LMM8
Length = 247
Score = 133 (51.9 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 41/131 (31%), Positives = 66/131 (50%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+R+I L + + V+FSKRR GL K +E C +++A++V SP Y+FG
Sbjct: 6 LGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKA--YSFG 63
Query: 64 HSSVDAVLD----AFVNNRAPEAADKELVRLGISMFNEVKDLELYDKKISKAIK-SDGNL 118
H +V+ +LD + + A+ +L I M NE + +K+ + K S
Sbjct: 64 HPNVNKLLDHSLGRVIRHNNTNFAESR-TKLRIQMLNESLTEVMAEKEKEQETKQSIVQN 122
Query: 119 EREGFWEDYEK 129
ERE +D EK
Sbjct: 123 EREN--KDAEK 131
>TAIR|locus:2115420 [details] [associations]
symbol:AT4G36590 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS50066 SMART:SM00432 GO:GO:0005829 GO:GO:0005634
EMBL:CP002687 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
SUPFAM:SSF55455 HSSP:Q02078 EMBL:AL161589 EMBL:Z99708 EMBL:AY086178
EMBL:AY141234 EMBL:DQ446902 IPI:IPI00520544 PIR:A85432
RefSeq:NP_195377.1 UniGene:At.31315 ProteinModelPortal:O23222
SMR:O23222 IntAct:O23222 STRING:O23222 PRIDE:O23222
EnsemblPlants:AT4G36590.1 GeneID:829811 KEGG:ath:AT4G36590
TAIR:At4g36590 InParanoid:O23222 OMA:DLDMNET PhylomeDB:O23222
ProtClustDB:CLSN2685561 Genevestigator:O23222 Uniprot:O23222
Length = 248
Score = 132 (51.5 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 47/170 (27%), Positives = 82/170 (48%)
Query: 5 GKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFGH 64
G+++I +K+ + + V+FSKRR GL KA+E C + +++ L+V SP ++FGH
Sbjct: 7 GRQKIEMKKMENESNLQVTFSKRRFGLFKKASELCTLSGAEILLIVFSPGGKV--FSFGH 64
Query: 65 SSVDAVLDAFVN---NRA---PEAADKELVRL----GISMFNEV--KDLELYDKKISKAI 112
SV ++ F N N A + + +LV I N + + L +K+ K +
Sbjct: 65 PSVQELIHRFSNPNHNSAIVHHQNNNLQLVETRPDRNIQYLNNILTEVLANQEKEKQKRM 124
Query: 113 KSD---GNLEREGFWEDYEKLGNSDESIGELGVIVDKLAKAKEKAILRLT 159
D + E+ G W YEK D + E ++ L K+K + ++
Sbjct: 125 VLDLLKESREQVGNW--YEK-DVKDLDMNETNQLISALQDVKKKLVREMS 171
>TAIR|locus:2144355 [details] [associations]
symbol:MAF5 "MADS AFFECTING FLOWERING 5" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009910 "negative regulation of flower
development" evidence=IMP] [GO:0010048 "vernalization response"
evidence=IEP;RCA] [GO:0043481 "anthocyanin accumulation in tissues
in response to UV light" evidence=RCA] [GO:0048440 "carpel
development" evidence=RCA] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 EMBL:CP002688
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455
GO:GO:0009910 GO:GO:0010048 ProtClustDB:CLSN2686365 EMBL:BT025268
EMBL:AK175180 IPI:IPI00523683 RefSeq:NP_201313.2 UniGene:At.28687
ProteinModelPortal:Q683D7 SMR:Q683D7 STRING:Q683D7
EnsemblPlants:AT5G65080.1 GeneID:836632 KEGG:ath:AT5G65080
TAIR:At5g65080 InParanoid:Q683D7 PhylomeDB:Q683D7
ArrayExpress:Q683D7 Genevestigator:Q683D7 Uniprot:Q683D7
Length = 205
Score = 129 (50.5 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 51/168 (30%), Positives = 81/168 (48%)
Query: 3 AVGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTF 62
A+G+RR+ +KR + K R V+F KRR+GL+ KA + + S +AL + S +
Sbjct: 7 AMGRRRVEIKRIENKSSRQVTFCKRRNGLMEKARQLSILCGSSVALFIVSSTGKLYNSSS 66
Query: 63 GHSSVDAVLDAFVNNRA--PEAADKELVRLGISMFNEVKDLELYDKKISKAIKSDGNLER 120
G S+ ++ F +A PE D E E+ LE+ +KI +A K D N+
Sbjct: 67 G-DSMAKIISRFKIQQADDPETLDLEDKTQDYLSHKEL--LEIVQRKIEEA-KGD-NVSI 121
Query: 121 EGFWEDYEKLGNSDESIG----ELGVIVDKLAKAKEKAILRLTDLLAS 164
E E+L ++ I EL + + K + KEK + +LAS
Sbjct: 122 ESLISMEEQLKSALSVIRARKTELLMELVKNLQDKEKLLKEKNKVLAS 169
>TAIR|locus:2102871 [details] [associations]
symbol:AGL79 "AGAMOUS-like 79" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 EMBL:CP002686 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068 SUPFAM:SSF55455
HSSP:Q02078 GO:GO:0048830 GO:GO:0010093 OMA:PPWMLRT EMBL:AY141238
IPI:IPI00517180 RefSeq:NP_189645.2 UniGene:At.36813
ProteinModelPortal:Q7X9H6 SMR:Q7X9H6 IntAct:Q7X9H6
EnsemblPlants:AT3G30260.1 GeneID:822726 KEGG:ath:AT3G30260
TAIR:At3g30260 InParanoid:Q7X9H6 PhylomeDB:Q7X9H6
ProtClustDB:CLSN2918545 ArrayExpress:Q7X9H6 Genevestigator:Q7X9H6
Uniprot:Q7X9H6
Length = 249
Score = 123 (48.4 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 28/71 (39%), Positives = 46/71 (64%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+ R+ L+R + K +R V+FSKRR GL+ KA E + +++AL+V SP Y+ G
Sbjct: 1 MGRGRVQLRRIENKIRRQVTFSKRRTGLVKKAQEISVLCDAEVALIVFSPKGKLFEYSAG 60
Query: 64 HSSVDAVLDAF 74
SS++ +LD +
Sbjct: 61 -SSMERILDRY 70
Score = 40 (19.1 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 11/55 (20%), Positives = 27/55 (49%)
Query: 98 VKDLELYDKKISKAIKSDGNLEREGFWEDYEKLGNSDESIGELGVIVDKLAKAKE 152
++DL+ + ++ A+K + + + E +L ++ + EL + K A +E
Sbjct: 122 IRDLQGVEMQLDTALKKTRSRKNQLMVESIAQLQKKEKELKELKKQLTKKAGERE 176
>UNIPROTKB|Q6EU39 [details] [associations]
symbol:MADS6 "MADS-box transcription factor 6"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] [GO:0010022 "meristem determinacy"
evidence=IMP] [GO:0010093 "specification of floral organ identity"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
GO:GO:0045893 GO:GO:0030154 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 HOGENOM:HOG000155301 GO:GO:0010228
SUPFAM:SSF55455 KO:K09264 GO:GO:0010093 EMBL:AP008208 EMBL:CM000139
GO:GO:0010022 EMBL:U78782 EMBL:FJ666318 EMBL:AP004178 EMBL:AK069103
PIR:T04167 RefSeq:NP_001047749.1 UniGene:Os.7271
ProteinModelPortal:Q6EU39 IntAct:Q6EU39
EnsemblPlants:LOC_Os02g45770.1 GeneID:4330328 KEGG:osa:4330328
Gramene:Q6EU39 OMA:SAGITKT ProtClustDB:CLSN2693070 Uniprot:Q6EU39
Length = 250
Score = 118 (46.6 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 27/71 (38%), Positives = 43/71 (60%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+ R+ LKR + K R V+FSKRR+GLL KA E + +++AL++ S S Y FG
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS--SRGKLYEFG 58
Query: 64 HSSVDAVLDAF 74
+ + L+ +
Sbjct: 59 SAGITKTLERY 69
Score = 47 (21.6 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 10/43 (23%), Positives = 22/43 (51%)
Query: 98 VKDLELYDKKISKAIKSDGNLEREGFWEDYEKLGNSDESIGEL 140
VK+L+ +K++ A+ + + E E+L + +GE+
Sbjct: 120 VKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEI 162
>TAIR|locus:2057741 [details] [associations]
symbol:AGL33 "AGAMOUS-like 33" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000155301 SUPFAM:SSF55455
HSSP:Q02078 EMBL:AC004484 EMBL:AY141233 IPI:IPI00538668 PIR:A84659
RefSeq:NP_180200.1 UniGene:At.38911 ProteinModelPortal:O64840
SMR:O64840 PRIDE:O64840 EnsemblPlants:AT2G26320.1 GeneID:817172
KEGG:ath:AT2G26320 TAIR:At2g26320 eggNOG:NOG276411
InParanoid:O64840 OMA:FHTILER PhylomeDB:O64840
ProtClustDB:CLSN2913018 ArrayExpress:O64840 Genevestigator:O64840
Uniprot:O64840
Length = 109
Score = 114 (45.2 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G++++ LKR ++ ++R+ FSKR+ GL KA E L S + L+V SP T +
Sbjct: 17 MGRKKLKLKRIESLKERSSKFSKRKKGLFKKAEEVALLCDSDIMLIVVSPTEKPTVFNTR 76
Query: 64 HSSVDAVLDAF 74
S +L+ F
Sbjct: 77 SRSFHTILERF 87
>UNIPROTKB|Q7XUN2 [details] [associations]
symbol:MADS17 "MADS-box transcription factor 17"
species:39947 "Oryza sativa Japonica Group" [GO:0010093
"specification of floral organ identity" evidence=IMP]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 GO:GO:0010228 SUPFAM:SSF55455
GO:GO:0010093 EMBL:AF109153 EMBL:AY551918 EMBL:AL606688
EMBL:AF095646 ProteinModelPortal:Q7XUN2 IntAct:Q7XUN2
KEGG:dosa:Os04t0580700-01 Gramene:Q7XUN2 Uniprot:Q7XUN2
Length = 249
Score = 120 (47.3 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 27/71 (38%), Positives = 44/71 (61%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+ R+ LKR + K R V+FSKRR+GLL KA E + +++AL++ S S Y FG
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS--SRGKLYEFG 58
Query: 64 HSSVDAVLDAF 74
+ ++ L+ +
Sbjct: 59 SAGINKTLEKY 69
Score = 41 (19.5 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 8/43 (18%), Positives = 21/43 (48%)
Query: 98 VKDLELYDKKISKAIKSDGNLEREGFWEDYEKLGNSDESIGEL 140
+K+L+ +K++ ++ + + E + L + +GEL
Sbjct: 122 IKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGEL 164
>TAIR|locus:2043600 [details] [associations]
symbol:AGL6 "AT2G45650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0048437 "floral organ development" evidence=IMP] [GO:0009911
"positive regulation of flower development" evidence=IMP]
[GO:0048481 "ovule development" evidence=RCA] InterPro:IPR002100
InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 GO:GO:0030154 EMBL:CP002685 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009911 eggNOG:COG5068
GO:GO:0010228 SUPFAM:SSF55455 EMBL:M55554 EMBL:AC003680
IPI:IPI00531522 PIR:F39534 RefSeq:NP_182089.1 UniGene:At.512
ProteinModelPortal:P29386 SMR:P29386 IntAct:P29386 STRING:P29386
EnsemblPlants:AT2G45650.1 GeneID:819173 KEGG:ath:AT2G45650
GeneFarm:3546 TAIR:At2g45650 InParanoid:P29386 KO:K09264
OMA:KERQLGD PhylomeDB:P29386 ProtClustDB:CLSN2913049
Genevestigator:P29386 GO:GO:0048437 Uniprot:P29386
Length = 252
Score = 116 (45.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 25/71 (35%), Positives = 44/71 (61%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+ R+ +KR + K R V+FSKRR+GLL KA E + +++AL++ S S Y FG
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS--SRGKLYEFG 58
Query: 64 HSSVDAVLDAF 74
+++ ++ +
Sbjct: 59 SVGIESTIERY 69
Score = 46 (21.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 8/43 (18%), Positives = 23/43 (53%)
Query: 98 VKDLELYDKKISKAIKSDGNLEREGFWEDYEKLGNSDESIGEL 140
VK+L+ ++++ A+ + + + E+ E L + +G++
Sbjct: 120 VKELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDI 162
>TAIR|locus:2103415 [details] [associations]
symbol:AGL91 "AGAMOUS-like 91" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC036106 eggNOG:COG5068
SUPFAM:SSF55455 HSSP:P11746 HOGENOM:HOG000238700
ProtClustDB:CLSN2683539 EMBL:DQ056634 IPI:IPI00548671
RefSeq:NP_187320.1 UniGene:At.64985 ProteinModelPortal:Q9C836
SMR:Q9C836 EnsemblPlants:AT3G66656.1 GeneID:819848
KEGG:ath:AT3G66656 TAIR:At3g66656 InParanoid:Q9C836 OMA:QEKKICK
PhylomeDB:Q9C836 Genevestigator:Q9C836 Uniprot:Q9C836
Length = 178
Score = 121 (47.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 32/111 (28%), Positives = 54/111 (48%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+R+I +++ + V+FSKRR GL KA+E +++ ++V SP + Y+FG
Sbjct: 1 MGRRKIKMEKVQDTNTKQVTFSKRRLGLFKKASELATLCNAEVGIVVFSPGNKP--YSFG 58
Query: 64 HSSVDAVLDAFVNNRAPEAADKELVRLGISMFNEVKDLELYDKKISKAIKS 114
+ D + + F N E G S N + +KKI K + S
Sbjct: 59 KPNFDVIAERFKNEFEEEEEGDSCETSGYSRGNRARQ----EKKICKRLNS 105
>TAIR|locus:2202420 [details] [associations]
symbol:AGL102 "AGAMOUS-like 102" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066
SMART:SM00432 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068
SUPFAM:SSF55455 HSSP:P11746 EMBL:AC012463 EMBL:AY141241
IPI:IPI00548327 RefSeq:NP_175207.1 UniGene:At.38560
ProteinModelPortal:Q9FZF2 SMR:Q9FZF2 IntAct:Q9FZF2 STRING:Q9FZF2
EnsemblPlants:AT1G47760.1 GeneID:841187 KEGG:ath:AT1G47760
TAIR:At1g47760 HOGENOM:HOG000152598 InParanoid:Q9FZF2 OMA:VVERIQN
PhylomeDB:Q9FZF2 ProtClustDB:CLSN2914527 Genevestigator:Q9FZF2
Uniprot:Q9FZF2
Length = 184
Score = 122 (48.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 35/125 (28%), Positives = 67/125 (53%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+R+I +K + +R +FS+RR+G+ KA E ++A+LV SP + YT+G
Sbjct: 1 MGRRKIEIKFIEDSIERKATFSRRRNGIFKKADELAKLCNVEIAVLVISPTNIP--YTYG 58
Query: 64 HSSVDAVLDAFVNNRAPEAADKELVRLGISMFNEVKDLELYDKKISKAIKSDGNLEREGF 123
+ + V++ N P A+ K +R S+ E++ ++ + + + K K NLE+
Sbjct: 59 YPCFNDVVERIQN---PSASSK--LR---SLMKELEQIKEFQEDLRK--KQQRNLEKSNM 108
Query: 124 WEDYE 128
E+ +
Sbjct: 109 KENVD 113
>UNIPROTKB|D2T2G0 [details] [associations]
symbol:gsqua2 "GSQUA2 protein" species:18101 "Gerbera
hybrid cultivar" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 EMBL:FN298387 IntAct:D2T2G0
Uniprot:D2T2G0
Length = 238
Score = 124 (48.7 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 30/71 (42%), Positives = 44/71 (61%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+ R+ LKR + K R V+FSKRR GLL KA E + + +AL+V S Y+
Sbjct: 1 MGRGRVQLKRIENKISRQVTFSKRRTGLLKKAHEISVLCDADVALIVFSTKGKLFEYST- 59
Query: 64 HSSVDAVLDAF 74
HSS+DA+L+ +
Sbjct: 60 HSSMDAILERY 70
>TAIR|locus:2195798 [details] [associations]
symbol:AT1G17310 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11746 EMBL:AC026479
ProtClustDB:CLSN2679559 EMBL:AY141240 EMBL:DQ446258 EMBL:BT025284
EMBL:AB493462 IPI:IPI00524771 PIR:E86309 RefSeq:NP_173175.1
UniGene:At.41842 ProteinModelPortal:Q9LN16 SMR:Q9LN16
EnsemblPlants:AT1G17310.1 GeneID:838303 KEGG:ath:AT1G17310
TAIR:At1g17310 InParanoid:Q9LN16 OMA:IVAMGND PhylomeDB:Q9LN16
ArrayExpress:Q9LN16 Genevestigator:Q9LN16 Uniprot:Q9LN16
Length = 217
Score = 122 (48.0 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 27/76 (35%), Positives = 49/76 (64%)
Query: 5 GKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFGH 64
G+++I +K+ + + +R V+FSKRR GL K+AE + T +++A++ S Y FGH
Sbjct: 48 GRQKIEIKKIEEETKRQVTFSKRRRGLFKKSAELSVLTGAKIAVITFSKCD--RIYRFGH 105
Query: 65 SSVDAVLDAFVNNRAP 80
VDA++D ++ ++P
Sbjct: 106 --VDALIDKYLR-KSP 118
>TAIR|locus:2033273 [details] [associations]
symbol:AP1 "AT1G69120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IGI;IDA] [GO:0009908 "flower development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0010076 "maintenance
of floral meristem identity" evidence=IGI] [GO:0010582 "floral
meristem determinacy" evidence=IGI] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0009556 "microsporogenesis" evidence=RCA]
[GO:0009827 "plant-type cell wall modification" evidence=RCA]
[GO:0009860 "pollen tube growth" evidence=RCA] [GO:0009886
"post-embryonic morphogenesis" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010093
"specification of floral organ identity" evidence=RCA] [GO:0048440
"carpel development" evidence=RCA] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0052543 "callose deposition in cell
wall" evidence=RCA] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC008262 eggNOG:COG5068
HOGENOM:HOG000155301 SUPFAM:SSF55455 GO:GO:0010582 GO:GO:0010076
UniGene:At.10200 KO:K09264 GO:GO:0048830 GO:GO:0010093 EMBL:Z16421
EMBL:BT004113 EMBL:BT004951 EMBL:AK175933 EMBL:AY087956
EMBL:AF466771 EMBL:AF466772 EMBL:AF466773 EMBL:AF466774
EMBL:AF466775 EMBL:AF466776 EMBL:AF466777 EMBL:AF466778
EMBL:AF466779 EMBL:AF466780 EMBL:AF466781 EMBL:AF466782
EMBL:AF466783 EMBL:AF466784 EMBL:AF466785 IPI:IPI00543034
PIR:S27109 RefSeq:NP_177074.1 UniGene:At.24302
ProteinModelPortal:P35631 SMR:P35631 IntAct:P35631 STRING:P35631
EnsemblPlants:AT1G69120.1 GeneID:843244 KEGG:ath:AT1G69120
GeneFarm:3482 TAIR:At1g69120 InParanoid:P35631 OMA:LMYESIN
PhylomeDB:P35631 ProtClustDB:CLSN2682513 Genevestigator:P35631
GermOnline:AT1G69120 GO:GO:0009933 Uniprot:P35631
Length = 256
Score = 103 (41.3 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 35/108 (32%), Positives = 57/108 (52%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+ R+ LKR + K R V+FSKRR GLL KA E + +++AL+V S Y+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 64 HSSVDAVLDAFVNNRAPEA---ADKELVRLGISM-FNEVK-DLELYDK 106
S ++ +L+ + E A + V SM +N +K +EL ++
Sbjct: 61 -SCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLER 107
Score = 56 (24.8 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 15/59 (25%), Positives = 32/59 (54%)
Query: 99 KDLELYDKKISKAIKSDGNLEREGFWEDYEKLGNSDESIGELGVIVDKLAKAKEKAILR 157
K+L+ ++++ A+K + + +E +L +++I E ++ K K +EK ILR
Sbjct: 123 KELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREK-ILR 180
>UNIPROTKB|Q0D4T4 [details] [associations]
symbol:MADS18 "MADS-box transcription factor 18"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068
SUPFAM:SSF55455 GO:GO:0010582 GO:GO:0010076 GO:GO:0010077
GO:GO:0010154 GO:GO:0009933 EMBL:AP008213 EMBL:AF091458
EMBL:AJ011675 EMBL:AP005175 RefSeq:NP_001060225.1 UniGene:Os.4573
ProteinModelPortal:Q0D4T4 IntAct:Q0D4T4
EnsemblPlants:LOC_Os07g41370.1 GeneID:4343851
KEGG:dosa:Os07t0605200-01 KEGG:osa:4343851 Gramene:Q0D4T4
OMA:PPWMLRT ProtClustDB:CLSN2696916 Uniprot:Q0D4T4
Length = 249
Score = 111 (44.1 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 27/72 (37%), Positives = 44/72 (61%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+ + L+R + K R V+FSKRR+GLL KA E + + +AL+V S + Y F
Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFS--TKGKLYEFS 58
Query: 64 -HSSVDAVLDAF 74
HSS++ +L+ +
Sbjct: 59 SHSSMEGILERY 70
Score = 44 (20.5 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 11/57 (19%), Positives = 30/57 (52%)
Query: 98 VKDLELYDKKISKAIKSDGNLEREGFWEDYEKLGNSDESIGELGVIVDKLAKA-KEK 153
+K+L+ + ++ ++K + + + +E +L ++S+ ++ KL + KEK
Sbjct: 122 IKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLMETEKEK 178
>TAIR|locus:2032537 [details] [associations]
symbol:AGL59 "AGAMOUS-like 59" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11746
HOGENOM:HOG000238700 eggNOG:KOG0014 EMBL:AC010155
ProtClustDB:CLSN2679626 IPI:IPI00522494 PIR:G86410
RefSeq:NP_174168.1 UniGene:At.51805 ProteinModelPortal:Q9SGP4
SMR:Q9SGP4 EnsemblPlants:AT1G28460.1 GeneID:839745
KEGG:ath:AT1G28460 TAIR:At1g28460 InParanoid:Q9SGP4 OMA:CEQAASR
PhylomeDB:Q9SGP4 Genevestigator:Q9SGP4 Uniprot:Q9SGP4
Length = 182
Score = 114 (45.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/109 (30%), Positives = 58/109 (53%)
Query: 5 GKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFGH 64
GK++I +K+ + E R+V+FSKR +G+ K +E + ++A + S YTFG
Sbjct: 8 GKQKINIKKIEKDEGRSVTFSKRLNGIYTKISELSILCGVEVAFIGYSCSGKP--YTFGS 65
Query: 65 SSVDAVLDAFVNNRAPEAADKELVRLGISMFNEVKDLELYDKKISKAIK 113
S AV + F+N A ++ LV ++ + K EL KK ++ ++
Sbjct: 66 PSFQAVAERFLNGDASSSSSSSLV---MNAHKQAKIQELC-KKYNRLVE 110
>TAIR|locus:2025282 [details] [associations]
symbol:MAF1 "MADS AFFECTING FLOWERING 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009909 "regulation of flower development"
evidence=IMP] [GO:0009910 "negative regulation of flower
development" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0043481
"anthocyanin accumulation in tissues in response to UV light"
evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 EMBL:CP002684 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC002291 HOGENOM:HOG000155301
SUPFAM:SSF55455 GO:GO:0009908 GO:GO:0009910 EMBL:AF312665
EMBL:AF312666 EMBL:AF342808 EMBL:AY141210 EMBL:AY034083
EMBL:AK117577 EMBL:BT004598 EMBL:AK175247 EMBL:AK176270
EMBL:AK227948 EMBL:AY088709 IPI:IPI00526099 IPI:IPI00530435
IPI:IPI00531574 IPI:IPI00939001 PIR:F96799 RefSeq:NP_177833.3
RefSeq:NP_850979.1 RefSeq:NP_850980.2 RefSeq:NP_974160.2
UniGene:At.19799 HSSP:P11746 ProteinModelPortal:Q9AT76 SMR:Q9AT76
IntAct:Q9AT76 EnsemblPlants:AT1G77080.4 GeneID:844042
KEGG:ath:AT1G77080 GeneFarm:3552 TAIR:At1g77080 InParanoid:Q9AT76
OMA:ASQMGKN PhylomeDB:Q9AT76 ProtClustDB:CLSN2686365
ArrayExpress:Q9AT76 Genevestigator:Q9AT76 GO:GO:0048573
Uniprot:Q9AT76
Length = 196
Score = 115 (45.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 28/85 (32%), Positives = 48/85 (56%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+R+I +KR + K R V+FSKRR+GL++KA + + S +A++V S S + +
Sbjct: 1 MGRRKIEIKRIENKSSRQVTFSKRRNGLIDKARQLSILCESSVAVVVVS-ASGKLYDSSS 59
Query: 64 HSSVDAVLDAFVNNRAPE--AADKE 86
+ ++D + A E A D E
Sbjct: 60 GDDISKIIDRYEIQHADELRALDLE 84
>UNIPROTKB|Q6EUV6 [details] [associations]
symbol:grcd3 "MADS domain protein" species:18101 "Gerbera
hybrid cultivar" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 EMBL:AJ784157
ProteinModelPortal:Q6EUV6 IntAct:Q6EUV6 Uniprot:Q6EUV6
Length = 247
Score = 111 (44.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 27/71 (38%), Positives = 41/71 (57%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+ R+ LKR + K R V+FSKRR+GLL KA E + +++ L++ S S Y FG
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVGLIIFS--SRDKLYEFG 58
Query: 64 HSSVDAVLDAF 74
V L+ +
Sbjct: 59 SVGVMKTLERY 69
Score = 39 (18.8 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 9/43 (20%), Positives = 21/43 (48%)
Query: 98 VKDLELYDKKISKAIKSDGNLEREGFWEDYEKLGNSDESIGEL 140
VK+L +K++ A+ + + E E+L + +G++
Sbjct: 119 VKELHNLEKQLEGALTQARQRKTQIMVEQMEELRRKERELGDM 161
Score = 35 (17.4 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 9/40 (22%), Positives = 19/40 (47%)
Query: 98 VKDLELYDKKISKAIKSDGNLEREGFWEDYEKLGNSDESI 137
+K LE Y + ++ E + ++++ KL ES+
Sbjct: 63 MKTLERYQRCCFNPQDNNNERETQSWYQEVSKLKAKFESL 102
>TAIR|locus:2177749 [details] [associations]
symbol:AGL31 "AGAMOUS-like 31" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS;TAS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009910 "negative regulation of flower
development" evidence=IMP] [GO:0010048 "vernalization response"
evidence=IMP] [GO:0010221 "negative regulation of vernalization
response" evidence=IMP] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB019236 eggNOG:COG5068
HOGENOM:HOG000155301 SUPFAM:SSF55455 GO:GO:0009908 GO:GO:0009910
GO:GO:0010048 ProtClustDB:CLSN2686365 EMBL:AF312667 EMBL:AY141211
EMBL:AY231441 EMBL:AB026633 EMBL:EU980623 EMBL:EU980627
IPI:IPI00535221 IPI:IPI00546742 RefSeq:NP_001078798.1
RefSeq:NP_001119498.1 UniGene:At.49225 ProteinModelPortal:Q9FPN7
SMR:Q9FPN7 STRING:Q9FPN7 EnsemblPlants:AT5G65050.3 GeneID:836629
KEGG:ath:AT5G65050 GeneFarm:3558 TAIR:At5g65050 InParanoid:Q9FPN7
OMA:SVLCESS PhylomeDB:Q9FPN7 Genevestigator:Q9FPN7 GO:GO:0010221
Uniprot:Q9FPN7
Length = 196
Score = 114 (45.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 28/108 (25%), Positives = 57/108 (52%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G++++ +KR + K R V+FSKRR+GL+ KA + + S +A+LV S S + +
Sbjct: 1 MGRKKVEIKRIENKSSRQVTFSKRRNGLIEKARQLSILCESSIAVLVVSG-SGKLYKSAS 59
Query: 64 HSSVDAVLDAFVNNRAPEAADKELVRLGISMFNEVKDLELYDKKISKA 111
++ ++D + + A E +L + + LE+ K+ ++
Sbjct: 60 GDNMSKIIDRYEIHHADELEALDLAEKTRNYLPLKELLEIVQSKLEES 107
>TAIR|locus:2040819 [details] [associations]
symbol:AGL29 "AGAMOUS-like 29" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002685 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078 EMBL:AC004077
EMBL:AC004481 EMBL:DQ446598 IPI:IPI00526479 PIR:T02331
RefSeq:NP_180991.1 UniGene:At.37804 ProteinModelPortal:O64703
SMR:O64703 EnsemblPlants:AT2G34440.1 GeneID:818007
KEGG:ath:AT2G34440 TAIR:At2g34440 InParanoid:O64703 OMA:QASSCLM
PhylomeDB:O64703 ProtClustDB:CLSN2683539 ArrayExpress:O64703
Genevestigator:O64703 Uniprot:O64703
Length = 172
Score = 110 (43.8 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 44/154 (28%), Positives = 74/154 (48%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+R+I ++ R V+FSKRR GL KA+E ++L ++V SP +++G
Sbjct: 1 MGRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKP--FSYG 58
Query: 64 HSSVDAVLDAFVNNRAP-EAADKEL---VRLGISMFNEVKDL---ELYDKKISKAIKSDG 116
++D+V + F+ ++ D+E R + +E DL E+ +K + KS
Sbjct: 59 KPNLDSVAERFMREYDDSDSGDEEKSGNYRPKLKRLSERLDLLNQEVEAEK-ERGEKSQE 117
Query: 117 NLEREG---FWEDYEKLGNSDESIGELGVIVDKL 147
LE G F E E L ++ EL D+L
Sbjct: 118 KLESAGDERFKESIETL-----TLDELNEYKDRL 146
>UNIPROTKB|Q10CQ1 [details] [associations]
symbol:MADS14 "MADS-box transcription factor 14"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
GO:GO:0030154 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:DP000009 EMBL:AP008209 eggNOG:COG5068 SUPFAM:SSF55455
GO:GO:0009908 KO:K09264 EMBL:AF377947 EMBL:AC135225 EMBL:AC092556
EMBL:AF058697 EMBL:AB041020 EMBL:AY332478 EMBL:AY551916
RefSeq:NP_001051300.1 UniGene:Os.2348 ProteinModelPortal:Q10CQ1
IntAct:Q10CQ1 EnsemblPlants:LOC_Os03g54160.2 GeneID:4334140
KEGG:osa:4334140 Gramene:Q10CQ1 ProtClustDB:CLSN2694303
Uniprot:Q10CQ1
Length = 246
Score = 103 (41.3 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+ ++ LKR + K R V+FSKRR GLL KA E + +++AL++ S Y
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATD 60
Query: 64 HSSVDAVLDAF 74
S +D +L+ +
Sbjct: 61 -SCMDKILERY 70
Score = 45 (20.9 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 13/73 (17%), Positives = 35/73 (47%)
Query: 81 EAADKELVRLGISMFNEVKDLELYDKKISKAIKSDGNLEREGFWEDYEKLGNSDESIGEL 140
+ K L+ + N +K+L+ ++++ ++K + + + E +L ++S+ E
Sbjct: 106 QKCQKHLMGEDLESLN-LKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEE 164
Query: 141 GVIVDKLAKAKEK 153
++ K K+K
Sbjct: 165 NKVLQKELVEKQK 177
>TAIR|locus:2082618 [details] [associations]
symbol:AGL16 "AGAMOUS-like 16" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0010440 "stomatal lineage progression" evidence=IMP]
[GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0009556
"microsporogenesis" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] [GO:0052543 "callose deposition in cell wall"
evidence=RCA] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0042803 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455
EMBL:AY141209 EMBL:BT030046 EMBL:AF312662 IPI:IPI00522001
IPI:IPI01027879 RefSeq:NP_191282.2 UniGene:At.21102 HSSP:Q02078
ProteinModelPortal:A2RVQ5 SMR:A2RVQ5 IntAct:A2RVQ5 STRING:A2RVQ5
PRIDE:A2RVQ5 EnsemblPlants:AT3G57230.1 GeneID:824890
KEGG:ath:AT3G57230 GeneFarm:3515 TAIR:At3g57230 InParanoid:A2RVQ5
OMA:ASEIQFW PhylomeDB:A2RVQ5 ProtClustDB:CLSN2680436
ArrayExpress:A2RVQ5 Genevestigator:A2RVQ5 GO:GO:0010440
Uniprot:A2RVQ5
Length = 240
Score = 113 (44.8 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 24/83 (28%), Positives = 49/83 (59%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+ +I +KR + R V+FSKRR+GLL KA E + +++ +++ S S Y F
Sbjct: 1 MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFS--STGRLYDFS 58
Query: 64 HSSVDAVLDAFVNNRAPEAADKE 86
SS+ +V++ + + + +++ +
Sbjct: 59 SSSMKSVIERYSDAKGETSSEND 81
>TAIR|locus:2121070 [details] [associations]
symbol:AGL21 "AT4G37940" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0009556 "microsporogenesis" evidence=RCA] [GO:0009691
"cytokinin biosynthetic process" evidence=RCA] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] [GO:0052543 "callose deposition in cell wall"
evidence=RCA] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161592 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455
ProtClustDB:CLSN2683748 EMBL:AF336979 EMBL:AL035538 IPI:IPI00531853
PIR:T05621 RefSeq:NP_195507.1 UniGene:At.28801
ProteinModelPortal:Q9SZJ6 SMR:Q9SZJ6 IntAct:Q9SZJ6 STRING:Q9SZJ6
EnsemblPlants:AT4G37940.1 GeneID:829950 KEGG:ath:AT4G37940
GeneFarm:3544 TAIR:At4g37940 InParanoid:Q9SZJ6 OMA:DDESHTQ
PhylomeDB:Q9SZJ6 ArrayExpress:Q9SZJ6 Genevestigator:Q9SZJ6
GermOnline:AT4G37940 Uniprot:Q9SZJ6
Length = 228
Score = 112 (44.5 bits), Expect = 0.00012, P = 0.00012
Identities = 25/71 (35%), Positives = 42/71 (59%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+ +I ++R D R V+FSKRR GL+ KA E + +++ L++ S S Y F
Sbjct: 1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFS--STGKLYDFA 58
Query: 64 HSSVDAVLDAF 74
SS+ +V+D +
Sbjct: 59 SSSMKSVIDRY 69
>TAIR|locus:2032372 [details] [associations]
symbol:SEP3 "SEPALLATA3" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0001708 "cell fate specification"
evidence=RCA;IMP] [GO:0010093 "specification of floral organ
identity" evidence=RCA;IMP] [GO:0009908 "flower development"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048481 "ovule development" evidence=RCA;IMP] [GO:0048833
"specification of floral organ number" evidence=IMP] [GO:0048440
"carpel development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0001708 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068 HOGENOM:HOG000155301
SUPFAM:SSF55455 GO:GO:0010093 GO:GO:0048481 GO:GO:0048833
EMBL:AC002396 EMBL:AF015552 EMBL:AY088272 EMBL:AK118696
IPI:IPI00516255 IPI:IPI00534499 PIR:T00656 RefSeq:NP_564214.2
RefSeq:NP_850953.1 UniGene:At.24086 ProteinModelPortal:O22456
SMR:O22456 IntAct:O22456 STRING:O22456 PaxDb:O22456 PRIDE:O22456
EnsemblPlants:AT1G24260.2 GeneID:839040 KEGG:ath:AT1G24260
GeneFarm:3497 TAIR:At1g24260 InParanoid:O22456 OMA:PLECEPI
PhylomeDB:O22456 ProtClustDB:CLSN2690422 Genevestigator:O22456
GermOnline:AT1G24260 Uniprot:O22456
Length = 251
Score = 112 (44.5 bits), Expect = 0.00015, P = 0.00015
Identities = 37/108 (34%), Positives = 58/108 (53%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTF- 62
+G+ R+ LKR + K R V+F+KRR+GLL KA E + +++AL++ S + Y F
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS--NRGKLYEFC 58
Query: 63 GHSSVDAVLDAF--VNNRAPE--AADKELVRLGISMFNEVKDL-ELYD 105
SS+ L+ + N APE +E + + +S E L E YD
Sbjct: 59 SSSSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYD 106
>TAIR|locus:2144345 [details] [associations]
symbol:MAF3 "MADS AFFECTING FLOWERING 3" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009910 "negative regulation of flower
development" evidence=IMP] [GO:0010048 "vernalization response"
evidence=IEP] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 EMBL:CP002688 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 GO:GO:0009910
GO:GO:0010048 HSSP:P11746 ProtClustDB:CLSN2686365 EMBL:AB026633
EMBL:AY231445 EMBL:EU980617 EMBL:EU980619 EMBL:EU980621
EMBL:EU980626 IPI:IPI00517424 RefSeq:NP_201311.1 UniGene:At.21040
ProteinModelPortal:Q9LSR7 SMR:Q9LSR7 EnsemblPlants:AT5G65060.1
GeneID:836630 KEGG:ath:AT5G65060 TAIR:At5g65060 InParanoid:Q9LSR7
OMA:GMARENG PhylomeDB:Q9LSR7 Genevestigator:Q9LSR7 Uniprot:Q9LSR7
Length = 196
Score = 109 (43.4 bits), Expect = 0.00016, P = 0.00016
Identities = 38/165 (23%), Positives = 78/165 (47%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+R++ +KR + K R V+FSKRR GL+ KA + + S +A++ S S + +
Sbjct: 1 MGRRKVEIKRIENKSSRQVTFSKRRKGLIEKARQLSILCESSIAVVAVSG-SGKLYDSAS 59
Query: 64 HSSVDAVLDAFVNNRAPEAADKELVRLGISMFNEVKDLELYDKKISKA----IKSDGNLE 119
++ ++D + + A E +L + + LE+ K+ ++ + D +
Sbjct: 60 GDNMSKIIDRYEIHHADELKALDLAEKIRNYLPHKELLEIVQSKLEESNVDNVSVDSLIS 119
Query: 120 REGFWEDYEKLGNSDESIGELGVIVDKLAKAKEKAILRLTDLLAS 164
E E + + ++ EL + K + +EK ++ +LAS
Sbjct: 120 MEEQLETALSVIRAKKT--ELMMEDMKSLQEREKLLIEENQILAS 162
>UNIPROTKB|Q9ZS30 [details] [associations]
symbol:gaga1 "MADS-box protein, GAGA1" species:18101
"Gerbera hybrid cultivar" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078 EMBL:AJ009722
ProteinModelPortal:Q9ZS30 IntAct:Q9ZS30 Uniprot:Q9ZS30
Length = 264
Score = 112 (44.5 bits), Expect = 0.00017, P = 0.00017
Identities = 44/156 (28%), Positives = 76/156 (48%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+GK +I +KR + R V+F KRR+GLL KA E + +++AL+V S S Y +
Sbjct: 33 MGKGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS--SRGRLYEYA 90
Query: 64 HSSVDAVLDAFVNNRAPEAADKELVRLGISMFNEVKDLELYDKKISKAIKSDGNLEREGF 123
++SV +D + K + S + + Y ++ +K + NL+ +
Sbjct: 91 NNSVKGTIDKY---------KKACLDPPTSGTVAEANTQYYQQEAAKLRQQIANLQNQNR 141
Query: 124 WEDYEKLGNSDESIGELGVIVDKLAKAK-EKAILRL 158
+ Y + ES+G++ V K + K EKAI R+
Sbjct: 142 -QFYRNI--MGESLGDMPVKDLKNLEGKLEKAISRI 174
>TAIR|locus:2173522 [details] [associations]
symbol:AGL8 "AGAMOUS-like 8" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009911 "positive regulation of flower development"
evidence=TAS] [GO:0010077 "maintenance of inflorescence meristem
identity" evidence=IGI] [GO:0031540 "regulation of anthocyanin
biosynthetic process" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] [GO:0010154 "fruit development" evidence=IMP]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455 GO:GO:0010077
KO:K09264 EMBL:U33473 EMBL:AB008269 EMBL:AF386929 EMBL:AY072463
IPI:IPI00522952 PIR:S71208 RefSeq:NP_568929.1 UniGene:At.5426
ProteinModelPortal:Q38876 SMR:Q38876 IntAct:Q38876 STRING:Q38876
EnsemblPlants:AT5G60910.1 GeneID:836212 KEGG:ath:AT5G60910
GeneFarm:3484 TAIR:At5g60910 InParanoid:Q38876 OMA:DSCMERI
PhylomeDB:Q38876 ProtClustDB:CLSN2690058 Genevestigator:Q38876
GermOnline:AT5G60910 GO:GO:0048830 GO:GO:0010154 GO:GO:0010093
Uniprot:Q38876
Length = 242
Score = 111 (44.1 bits), Expect = 0.00018, P = 0.00018
Identities = 42/154 (27%), Positives = 78/154 (50%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+ R+ LKR + K R V+FSKRR GLL KA E + +++AL+V S Y+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTD 60
Query: 64 HSSVDAVLDAFVNNRAPEAADKELVRLGISMFNEVKDLELYDKKISKAIKSDGNLEREGF 123
S ++ +L+ + +R + DK+LV +S + ++ L K+ ++ +R
Sbjct: 61 -SCMERILERY--DRYLYS-DKQLVGRDVS---QSENWVLEHAKLKARVEVLEKNKRNFM 113
Query: 124 WEDYEKLGNSD-ESIG-ELGVIVDKLAKAKEKAI 155
ED + L + +S+ +L + + K +A+
Sbjct: 114 GEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAM 147
>UNIPROTKB|O65874 [details] [associations]
symbol:MTF1 "MADS-box transcription factor 1" species:3888
"Pisum sativum" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0005634 "nucleus"
evidence=IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0009888 "tissue development"
evidence=NAS] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 GO:GO:0009888
EMBL:AJ223318 PIR:T06543 ProteinModelPortal:O65874 Uniprot:O65874
Length = 247
Score = 111 (44.1 bits), Expect = 0.00019, P = 0.00019
Identities = 37/104 (35%), Positives = 56/104 (53%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTF- 62
+G+ R+ LKR + K R V+F+KRR+GLL KA E + +++AL+V S + Y F
Sbjct: 1 MGRGRVELKRVENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFS--NRGKLYEFC 58
Query: 63 GHSSVDAVLDAF--VNNRAPEA--ADKELVRLGISMFNEVKDLE 102
SS+ L+ + N APE KE + L +S E L+
Sbjct: 59 STSSMLKTLERYQKCNYGAPEGNVTSKEALVLELSSQQEYLKLK 102
>UNIPROTKB|Q9FST1 [details] [associations]
symbol:grcd1 "MADS box protein" species:18101 "Gerbera
hybrid cultivar" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
SUPFAM:SSF55455 HSSP:Q02078 EMBL:AJ400623 ProteinModelPortal:Q9FST1
IntAct:Q9FST1 Uniprot:Q9FST1
Length = 242
Score = 110 (43.8 bits), Expect = 0.00024, P = 0.00024
Identities = 49/143 (34%), Positives = 74/143 (51%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+GK R+ LKR + K R V+F+KRR+GLL KA E + +++AL+V S + Y F
Sbjct: 1 MGKGRLELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFS--TRGKLYEFS 58
Query: 64 H-SSVDAVLDAF--VNNRAPE----AADKELVRLGISMFNEVKDL-ELYDKKISKAIKSD 115
SS+ L+ + + PE AA ++L S + E L E YD A+K
Sbjct: 59 STSSMLKTLERYEKCSFGPPEQRRPAAKEDLQEQ--SSYQEYMRLKERYD-----ALK-- 109
Query: 116 GNLEREGFWEDYEKLGNSD-ESI 137
LER + E+ + L S+ ES+
Sbjct: 110 -RLERNYYGEEIDSLTTSELESL 131
>UNIPROTKB|Q43616 [details] [associations]
symbol:fbp7 "Floral binding protein number 7" species:4102
"Petunia x hybrida" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 UniProt:Q43616 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078 EMBL:X81651
ProteinModelPortal:Q43616 IntAct:Q43616
Length = 225
Score = 109 (43.4 bits), Expect = 0.00026, P = 0.00026
Identities = 23/71 (32%), Positives = 44/71 (61%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+ +I +KR + R V+F KRR+GLL KA E + +++AL+V S + Y +
Sbjct: 1 MGRGKIEIKRIENNTNRQVTFCKRRNGLLKKAYELSVLCEAEIALIVFS--TRGRVYEYS 58
Query: 64 HSSVDAVLDAF 74
++++ A++D +
Sbjct: 59 NNNIRAIIDRY 69
>TAIR|locus:2034949 [details] [associations]
symbol:AGL65 "AGAMOUS-like 65" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0009555 "pollen
development" evidence=IGI] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009555 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11831
HOGENOM:HOG000243910 EMBL:AY143172 IPI:IPI00527848
RefSeq:NP_173310.2 UniGene:At.41782 ProteinModelPortal:Q7X9I0
SMR:Q7X9I0 IntAct:Q7X9I0 STRING:Q7X9I0 EnsemblPlants:AT1G18750.1
GeneID:838457 KEGG:ath:AT1G18750 TAIR:At1g18750 InParanoid:Q7X9I0
OMA:CIEEVIS PhylomeDB:Q7X9I0 ProtClustDB:CLSN2680713
ArrayExpress:Q7X9I0 Genevestigator:Q7X9I0 Uniprot:Q7X9I0
Length = 389
Score = 113 (44.8 bits), Expect = 0.00027, P = 0.00027
Identities = 24/87 (27%), Positives = 46/87 (52%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+ ++ +KR ++ R V+++KR++G+L KA E + + LL+ SP T +
Sbjct: 1 MGRVKLKIKRLESTSNRQVTYTKRKNGILKKAKELSILCDIDIVLLMFSPTGRATAFHGE 60
Query: 64 HSSVDAVLDAFVNNRAPEAADKELVRL 90
HS ++ V+ F E ++L L
Sbjct: 61 HSCIEEVISKFAQLTPQERTKRKLESL 87
>UNIPROTKB|Q9ZS25 [details] [associations]
symbol:gsqua1 "MADS-box protein, GSQUA1" species:18101
"Gerbera hybrid cultivar" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
EMBL:AJ009727 ProteinModelPortal:Q9ZS25 IntAct:Q9ZS25
Uniprot:Q9ZS25
Length = 210
Score = 108 (43.1 bits), Expect = 0.00028, P = 0.00028
Identities = 38/128 (29%), Positives = 65/128 (50%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+ ++ LKR + K R V+FSKRR GLL KA E + +++AL+V S Y+
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRGGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTD 60
Query: 64 HSSVDAVLDAFVNNRAPEAADKELVRLGISMFNEVKDLELYDKKISKAIKSDGNLEREGF 123
S ++ +LD R + ++ + + + + ++ + +K S+A NL R
Sbjct: 61 -SCMENILD-----RYEQYSNIDRQHVAVDTDSPIRWTQECNKLKSRAELLQRNL-RHYM 113
Query: 124 WEDYEKLG 131
ED E LG
Sbjct: 114 GEDIESLG 121
>TAIR|locus:2127213 [details] [associations]
symbol:AGL19 "AGAMOUS-like 19" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010048 "vernalization response" evidence=RCA;IMP] [GO:0048510
"regulation of timing of transition from vegetative to reproductive
phase" evidence=IMP] [GO:0043481 "anthocyanin accumulation in
tissues in response to UV light" evidence=RCA] [GO:0048440 "carpel
development" evidence=RCA] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455
ProtClustDB:CLSN2685538 GO:GO:0009908 EMBL:AF312664 EMBL:AL031018
EMBL:AL161558 EMBL:AY142523 IPI:IPI00538138 PIR:T05126
RefSeq:NP_194026.1 UniGene:At.2376 ProteinModelPortal:O82743
SMR:O82743 IntAct:O82743 STRING:O82743 EnsemblPlants:AT4G22950.1
GeneID:828394 KEGG:ath:AT4G22950 GeneFarm:3503 TAIR:At4g22950
InParanoid:O82743 OMA:SSEVNID PhylomeDB:O82743
Genevestigator:O82743 GermOnline:AT4G22950 GO:GO:0048510
GO:GO:0010048 Uniprot:O82743
Length = 219
Score = 108 (43.1 bits), Expect = 0.00032, P = 0.00032
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 11 LKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFGHSSVDAV 70
+KR + R V+FSKRR+GLL KA E + +++AL++ SP S Y F SS+ A
Sbjct: 8 MKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSK--LYEFSSSSIAAT 65
Query: 71 LDAF 74
++ +
Sbjct: 66 IERY 69
>UNIPROTKB|Q9ATE9 [details] [associations]
symbol:FBP20 "MADS-box transcription factor FBP20"
species:4102 "Petunia x hybrida" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11746 EMBL:AF335238
ProteinModelPortal:Q9ATE9 IntAct:Q9ATE9 Uniprot:Q9ATE9
Length = 216
Score = 97 (39.2 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 11 LKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFGHSSVDAV 70
++R + R V+FSKRR+GLL KA E + +Q+ L++ SP Y F SS+ +
Sbjct: 8 MRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAQVGLVIFSPRGKQ--YEFSSSSMQEI 65
Query: 71 LDAF 74
++ +
Sbjct: 66 IERY 69
Score = 44 (20.5 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 12/74 (16%), Positives = 39/74 (52%)
Query: 81 EAADKELVRLGISMFNEVKDLELYDKKISKAIKSDGNLEREGFWEDYEKLGNSDESIG-E 139
E + ++L+ G+ +++L+ +K++ +++ + + F E EKL ++++ E
Sbjct: 103 ETSKRKLLGEGLGSCT-LEELQKIEKQLERSVSIIRARKMQVFKEQIEKLNEKEKALAAE 161
Query: 140 LGVIVDKLAKAKEK 153
++ +K +++
Sbjct: 162 NAMLREKFGGLQQR 175
>UNIPROTKB|D2T2F9 [details] [associations]
symbol:grcd5 "GRCD5 protein" species:18101 "Gerbera hybrid
cultivar" [GO:0005515 "protein binding" evidence=IPI] [GO:0042802
"identical protein binding" evidence=IPI] InterPro:IPR002100
InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
SUPFAM:SSF55455 EMBL:FN297861 IntAct:D2T2F9 Uniprot:D2T2F9
Length = 252
Score = 109 (43.4 bits), Expect = 0.00036, P = 0.00036
Identities = 47/164 (28%), Positives = 84/164 (51%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTF- 62
+G+ R+ LKR + K R V+F+KRR+GLL KA E + +++AL++ S + Y F
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS--NRGKLYEFC 58
Query: 63 GHSSVDAVLDAF--VNNRAPEAADKELVRLGISMFNEVKDLELYDKKISKAIKSDGNLER 120
SS+ L+ + N AP+ + R + + ++ + L+L K +A++ +R
Sbjct: 59 SSSSMLKTLERYQKCNYGAPDQTNVS-AREALELSSQQEYLKL--KARYEALQRS---QR 112
Query: 121 EGFWEDYEKLGNSD-ESIG-ELGVIVDKLAKAKEKAIL-RLTDL 161
ED L + ES+ +L + + A+ + +L LTDL
Sbjct: 113 NLLGEDLGPLNCKELESLERQLDTSLKHIRSARTQLMLDTLTDL 156
>UNIPROTKB|Q6Q9I2 [details] [associations]
symbol:MADS15 "MADS-box transcription factor 15"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068
HOGENOM:HOG000155301 SUPFAM:SSF55455 EMBL:AP003759 EMBL:AP004342
ProtClustDB:CLSN2694303 EMBL:AF058698 EMBL:AB003325 EMBL:AF345911
EMBL:AY551920 RefSeq:NP_001058720.1 UniGene:Os.12750
ProteinModelPortal:Q6Q9I2 IntAct:Q6Q9I2
EnsemblPlants:LOC_Os07g01820.3 GeneID:4342214
KEGG:dosa:Os07t0108900-01 KEGG:osa:4342214 Gramene:Q6Q9I2
Uniprot:Q6Q9I2
Length = 267
Score = 109 (43.4 bits), Expect = 0.00041, P = 0.00041
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+ ++ LKR + K R V+FSKRR+GLL KA E + +++A +V SP Y
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
Query: 64 HSSVDAVLDAF 74
S +D +L+ +
Sbjct: 61 -SRMDKILERY 70
>UNIPROTKB|Q03489 [details] [associations]
symbol:FBP2 "Agamous-like MADS-box protein AGL9 homolog"
species:4102 "Petunia x hybrida" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 EMBL:M91666 PIR:JQ1690
ProteinModelPortal:Q03489 IntAct:Q03489 Uniprot:Q03489
Length = 241
Score = 108 (43.1 bits), Expect = 0.00042, P = 0.00042
Identities = 48/164 (29%), Positives = 81/164 (49%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTF- 62
+G+ R+ LKR + K R V+F+KRR+GLL KA E + +++AL++ S + Y F
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS--NRGKLYEFC 58
Query: 63 GHSSVDAVLDAF--VNNRAPEAADKELVRLGISMFNEVKDLELYDKKISKAIKSDGNLER 120
SS+ L+ + N APE L IS E L+ + + + S NL
Sbjct: 59 SSSSMLKTLERYQKCNYGAPETNISTREALEISSQQEYLKLKARYEALQR---SQRNL-- 113
Query: 121 EGFWEDYEKLGNSD-ESIG-ELGVIVDKLAKAKEKAIL-RLTDL 161
ED L + + ES+ +L + + ++ + + +L +L DL
Sbjct: 114 --LGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLQDL 155
>UNIPROTKB|Q5K4R0 [details] [associations]
symbol:MADS47 "MADS-box transcription factor 47"
species:39947 "Oryza sativa Japonica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009742 "brassinosteroid mediated signaling
pathway" evidence=IMP] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0009742
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
eggNOG:COG5068 SUPFAM:SSF55455 GO:GO:0009910 GO:GO:0010582
GO:GO:0048438 GO:GO:0010076 GO:GO:0009266 GO:GO:0000900
EMBL:AY345221 EMBL:AY345222 EMBL:AJ536158 EMBL:AC125471
EMBL:AJ293816 RefSeq:NP_001049203.2 UniGene:Os.22281
ProteinModelPortal:Q5K4R0 IntAct:Q5K4R0 GeneID:4331872
KEGG:osa:4331872 Gramene:Q5K4R0 Uniprot:Q5K4R0
Length = 246
Score = 108 (43.1 bits), Expect = 0.00044, P = 0.00044
Identities = 26/73 (35%), Positives = 41/73 (56%)
Query: 3 AVGKR-RIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYT 61
A GKR RI ++R D R V+FSKRR GL KA E + +++ L+V S +
Sbjct: 18 ATGKRERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGK--LFQ 75
Query: 62 FGHSSVDAVLDAF 74
F +S++ ++D +
Sbjct: 76 FASTSMEQIIDRY 88
>TAIR|locus:2098826 [details] [associations]
symbol:AGL13 "AGAMOUS-like 13" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0010048 "vernalization response" evidence=RCA]
[GO:0043481 "anthocyanin accumulation in tissues in response to UV
light" evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL137898
eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455 EMBL:U20183
IPI:IPI00520452 PIR:T47904 RefSeq:NP_191671.1 UniGene:At.968
ProteinModelPortal:Q38837 SMR:Q38837 IntAct:Q38837 STRING:Q38837
PRIDE:Q38837 EnsemblPlants:AT3G61120.1 GeneID:825284
KEGG:ath:AT3G61120 GeneFarm:3547 TAIR:At3g61120 InParanoid:Q38837
OMA:KLETEDH PhylomeDB:Q38837 ProtClustDB:CLSN2915737
Genevestigator:Q38837 GermOnline:AT3G61120 Uniprot:Q38837
Length = 244
Score = 93 (37.8 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 21/71 (29%), Positives = 41/71 (57%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+ ++ +KR + K R V+FSKR+ GLL KA E + ++++L++ S + Y F
Sbjct: 1 MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFS--TGGKLYEFS 58
Query: 64 HSSVDAVLDAF 74
+ V ++ +
Sbjct: 59 NVGVGRTIERY 69
Score = 50 (22.7 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 17/69 (24%), Positives = 33/69 (47%)
Query: 98 VKDLELYDKKISKAIKSDGNLEREGFWEDYEKLGNSDESIGELGVIVDKLAKAKEKAILR 157
+K+L+ ++++ A+ + + + E E+L + ELG I +KL E +
Sbjct: 119 IKELQTLERQLEGALSATRKQKTQVMMEQMEELRRKER---ELGDINNKLKLETEDHDFK 175
Query: 158 -LTDLLASP 165
DLL +P
Sbjct: 176 GFQDLLLNP 184
>TAIR|locus:2030621 [details] [associations]
symbol:AGL104 "AGAMOUS-like 104" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009555 "pollen development" evidence=IGI] [GO:0009827
"plant-type cell wall modification" evidence=RCA] [GO:0009860
"pollen tube growth" evidence=RCA] [GO:0010584 "pollen exine
formation" evidence=RCA] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009555
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455
HSSP:Q02078 EMBL:AC069252 ProtClustDB:CLSN2679793 EMBL:DQ056457
IPI:IPI00546953 PIR:A86354 RefSeq:NP_173632.1 UniGene:At.41619
ProteinModelPortal:Q9LM46 SMR:Q9LM46 STRING:Q9LM46
EnsemblPlants:AT1G22130.1 GeneID:838818 KEGG:ath:AT1G22130
TAIR:At1g22130 HOGENOM:HOG000242882 InParanoid:Q9LM46 OMA:ERESALY
PhylomeDB:Q9LM46 Genevestigator:Q9LM46 Uniprot:Q9LM46
Length = 335
Score = 110 (43.8 bits), Expect = 0.00048, P = 0.00048
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+ ++ +KR + R V+FSKRR+GL+ KA E + +AL++ SP SD G
Sbjct: 1 MGRVKLEIKRIENTTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFSP-SDRLSLFSG 59
Query: 64 HSSVDAVLDAFVN 76
+ ++ V F+N
Sbjct: 60 KTRIEDVFSRFIN 72
>TAIR|locus:505006709 [details] [associations]
symbol:AGL42 "AGAMOUS-like 42" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009909 "regulation of flower development"
evidence=IMP] [GO:0009838 "abscission" evidence=IMP] [GO:0010150
"leaf senescence" evidence=IMP] [GO:0080187 "floral organ
senescence" evidence=IMP] [GO:0010048 "vernalization response"
evidence=RCA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=RCA] [GO:0048440 "carpel
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0010150 HOGENOM:HOG000155301 SUPFAM:SSF55455 HSSP:Q02078
GO:GO:0009909 EMBL:AB016880 GO:GO:0080187 EMBL:AY054220
EMBL:AY065206 EMBL:AY066035 EMBL:AY096509 EMBL:AY141213
IPI:IPI00526027 RefSeq:NP_001032123.1 RefSeq:NP_568952.1
RefSeq:NP_851247.1 UniGene:At.26394 ProteinModelPortal:Q9FIS1
SMR:Q9FIS1 IntAct:Q9FIS1 STRING:Q9FIS1 EnsemblPlants:AT5G62165.1
EnsemblPlants:AT5G62165.2 EnsemblPlants:AT5G62165.3 GeneID:836337
KEGG:ath:AT5G62165 TAIR:At5g62165 InParanoid:Q9FIS1 OMA:EASHMIT
PhylomeDB:Q9FIS1 ProtClustDB:CLSN2690064 ArrayExpress:Q9FIS1
Genevestigator:Q9FIS1 GO:GO:0009838 Uniprot:Q9FIS1
Length = 210
Score = 106 (42.4 bits), Expect = 0.00050, P = 0.00050
Identities = 43/160 (26%), Positives = 77/160 (48%)
Query: 8 RIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFGHSSV 67
+I +K+ + R V+FSKRR+GLL KA E + +QL+L++ S Y F S +
Sbjct: 5 KIEMKKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRG--RLYEFSSSDM 62
Query: 68 DAVLDAF--------VNNRAPEAADKELVRLGISMFNEVKDLELYDKKI-SKAIKSDGNL 118
++ + +N + ++L + M +++ LE + +K+ + I S
Sbjct: 63 QKTIERYRKYTKDHETSNHDSQIHLQQLKQEASHMITKIELLEFHKRKLLGQGIASCSLE 122
Query: 119 EREGFWEDYEK-LGNSDESIGEL-GVIVDKLAKAKEKAIL 156
E + ++ LG E +L ++KL KAKEK +L
Sbjct: 123 ELQEIDSQLQRSLGKVRERKAQLFKEQLEKL-KAKEKQLL 161
>UNIPROTKB|Q2QW53 [details] [associations]
symbol:MADS13 "MADS-box transcription factor 13"
species:39947 "Oryza sativa Japonica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048283 "indeterminate inflorescence morphogenesis"
evidence=IMP] [GO:0048481 "ovule development" evidence=IMP]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0048443 eggNOG:COG5068 HOGENOM:HOG000155301
SUPFAM:SSF55455 GO:GO:0048366 GO:GO:0048481 EMBL:DP000011
GO:GO:0048497 EMBL:AF151693 EMBL:AY332475 EMBL:AY551912
RefSeq:NP_001066385.1 UniGene:Os.2345 ProteinModelPortal:Q2QW53
IntAct:Q2QW53 EnsemblPlants:LOC_Os12g10540.1
EnsemblPlants:LOC_Os12g10540.2 EnsemblPlants:LOC_Os12g10540.3
EnsemblPlants:LOC_Os12g10540.4 GeneID:4351753 KEGG:osa:4351753
Gramene:Q2QW53 OMA:NENIYLR ProtClustDB:CLSN2698798 GO:GO:0048283
Uniprot:Q2QW53
Length = 270
Score = 108 (43.1 bits), Expect = 0.00055, P = 0.00055
Identities = 43/163 (26%), Positives = 75/163 (46%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+ RI +KR + R V+F KRR+GLL KA E + +++AL+V S S Y +
Sbjct: 1 MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS--SRGRLYEYS 58
Query: 64 HSS-VDAVLDAFVNNRA-PEAADKELVRLGISMFNEVKDLELYDKKISKAIKSDGNLERE 121
+++ V A +D + A + L+ + + + + K+ I+ N +
Sbjct: 59 NNNNVKATIDRYKKAHACGSTSGAPLIEVNAQQYYQQESA-----KLRHQIQMLQNTNKH 113
Query: 122 GFWEDYEKLGNSDESIGELGVIVDKLAKAKEKAILRLTDLLAS 164
++ L S+ EL + +L K K R +LLAS
Sbjct: 114 LVGDNVSNL-----SLKELKQLESRLEKGISKIRARKNELLAS 151
>UNIPROTKB|Q40885 [details] [associations]
symbol:AG1 "Floral homeotic protein AGAMOUS" species:4102
"Petunia x hybrida" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 EMBL:X72912 EMBL:AB076051 PIR:JQ2212
ProteinModelPortal:Q40885 IntAct:Q40885 Uniprot:Q40885
Length = 242
Score = 107 (42.7 bits), Expect = 0.00056, P = 0.00056
Identities = 25/71 (35%), Positives = 43/71 (60%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+ +I +KR + R V+F KRR+GLL KA E + +++AL+V S S Y +
Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS--SRGRLYEYA 74
Query: 64 HSSVDAVLDAF 74
++SV A ++ +
Sbjct: 75 NNSVKATIERY 85
>UNIPROTKB|Q9ZS29 [details] [associations]
symbol:GAGA2 "MADS-box protein, GAGA2" species:18101
"Gerbera hybrid cultivar" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
EMBL:AJ009723 ProteinModelPortal:Q9ZS29 IntAct:Q9ZS29
Uniprot:Q9ZS29
Length = 246
Score = 107 (42.7 bits), Expect = 0.00058, P = 0.00058
Identities = 25/71 (35%), Positives = 42/71 (59%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+ +I +KR + R V+F KRR+GLL KA E + +++AL+V S S Y +
Sbjct: 16 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS--SRGRLYEYA 73
Query: 64 HSSVDAVLDAF 74
++SV +D +
Sbjct: 74 NNSVKGTIDRY 84
>UNIPROTKB|Q0J466 [details] [associations]
symbol:MADS7 "MADS-box transcription factor 7"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
GO:GO:0030154 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
eggNOG:COG5068 SUPFAM:SSF55455 GO:GO:0009908 EMBL:AP008214
EMBL:U78891 EMBL:U31994 EMBL:Y15008 EMBL:AY332477 EMBL:AY551921
EMBL:AP005529 PIR:T04169 PIR:T04307 PIR:T04335
RefSeq:NP_001062335.1 UniGene:Os.2236 ProteinModelPortal:Q0J466
IntAct:Q0J466 EnsemblPlants:LOC_Os08g41950.2 GeneID:4346134
KEGG:osa:4346134 Gramene:Q0J466 ProtClustDB:CLSN2697505
Uniprot:Q0J466
Length = 249
Score = 107 (42.7 bits), Expect = 0.00060, P = 0.00060
Identities = 48/171 (28%), Positives = 85/171 (49%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTF- 62
+G+ R+ LKR + K R V+F+KRR+GLL KA E + +++AL++ S + Y F
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS--NRGKLYEFC 58
Query: 63 GHSSVDAVLDAF--VNNRAPEAA--DKELVRLGISMFNEVKDLELYDKKISKAIKSDGNL 118
S+ L+ + + PE A ++E +L S NE L+ ++ ++ NL
Sbjct: 59 STQSMTKTLEKYQKCSYAGPETAVQNRESEQLKASR-NEYLKLKA---RVENLQRTQRNL 114
Query: 119 EREGFWEDYEKLGNSD-ESIG-ELGVIVDKLAKAKEKAIL-RLTDLLASPQ 166
ED + LG + ES+ +L + + + K ++ +LT+L Q
Sbjct: 115 ----LGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQ 161
>TAIR|locus:2029411 [details] [associations]
symbol:AGL67 "AGAMOUS-like 67" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009686
"gibberellin biosynthetic process" evidence=RCA] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA]
[GO:0016114 "terpenoid biosynthetic process" evidence=RCA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 EMBL:CP002684 GO:GO:0005829
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
SUPFAM:SSF55455 IPI:IPI00544332 RefSeq:NP_001117616.1
RefSeq:NP_177918.2 UniGene:At.34362 UniGene:At.52553
ProteinModelPortal:F4I8L6 SMR:F4I8L6 EnsemblPlants:AT1G77950.1
EnsemblPlants:AT1G77950.2 GeneID:844130 KEGG:ath:AT1G77950
OMA:CEANLIN ArrayExpress:F4I8L6 Uniprot:F4I8L6
Length = 252
Score = 107 (42.7 bits), Expect = 0.00061, P = 0.00061
Identities = 26/73 (35%), Positives = 41/73 (56%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+ ++ LKR + R ++FSKR+ GL+ KA E LALL+ SP SD G
Sbjct: 1 MGRVKLELKRIEKSTNRQITFSKRKKGLIKKAYELSTLCDIDLALLMFSP-SDRLCLFSG 59
Query: 64 HSSVDAVLDAFVN 76
+ ++ VL ++N
Sbjct: 60 QTRIEDVLARYIN 72
>SGD|S000004646 [details] [associations]
symbol:MCM1 "Transcription factor involved in both repression
and activation" species:4932 "Saccharomyces cerevisiae" [GO:0003688
"DNA replication origin binding" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006525 "arginine metabolic process" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA;IMP] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IMP;IPI] [GO:0000978 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding" evidence=IDA]
[GO:0001078 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IDA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IMP;IDA]
[GO:0044377 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding, bending" evidence=IDA;IMP]
[GO:0090282 "positive regulation of transcription involved in
G2/M-phase of mitotic cell cycle" evidence=IMP] [GO:0006270 "DNA
replication initiation" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0001133 "sequence-specific
transcription regulatory region DNA binding RNA polymerase II
transcription factor recruiting transcription factor activity"
evidence=IDA;IPI] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IDA;IPI] [GO:0001198
"negative regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0001197 "positive regulation of mating-type
specific transcription from RNA polymerase II promoter"
evidence=IDA;IMP] [GO:0031494 "regulation of mating type switching"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:1900465 "negative regulation of arginine
catabolic process by negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:1900466 "positive
regulation of arginine biosynthetic process by positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 SGD:S000004646 GO:GO:0001078
GO:GO:0003688 GO:GO:0001077 EMBL:BK006946 GO:GO:0000790
GO:GO:0006270 eggNOG:COG5068 SUPFAM:SSF55455 EMBL:Z48502
GO:GO:0006525 GeneTree:ENSGT00400000022158 OrthoDB:EOG4P2TC4
GO:GO:0001102 GO:GO:0001133 GO:GO:0090282 GO:GO:0001197 KO:K12412
EMBL:X52453 EMBL:X14187 EMBL:M17511 EMBL:AY557985 PIR:A34599
RefSeq:NP_013757.1 PDB:1MNM PDBsum:1MNM ProteinModelPortal:P11746
SMR:P11746 DIP:DIP-72N IntAct:P11746 MINT:MINT-478633 STRING:P11746
PaxDb:P11746 EnsemblFungi:YMR043W GeneID:855060 KEGG:sce:YMR043W
CYGD:YMR043w OMA:CLNAPDD EvolutionaryTrace:P11746 NextBio:978315
Genevestigator:P11746 GermOnline:YMR043W GO:GO:0044377
GO:GO:1900465 GO:GO:0001198 GO:GO:1900466 GO:GO:0031494
Uniprot:P11746
Length = 286
Score = 108 (43.1 bits), Expect = 0.00062, P = 0.00062
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 6 KRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTF-YTFGH 64
+R+I +K + K +R V+FSKR+HG++ KA E + T +Q+ LLV VS+T YTF
Sbjct: 18 RRKIEIKFIENKTRRHVTFSKRKHGIMKKAFELSVLTGTQVLLLV---VSETGLVYTFST 74
Query: 65 SSVDAVL 71
+ ++
Sbjct: 75 PKFEPIV 81
>TAIR|locus:2029386 [details] [associations]
symbol:AGL66 "AGAMOUS-like 66" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IGI;IMP] [GO:0009827
"plant-type cell wall modification" evidence=RCA] [GO:0009860
"pollen tube growth" evidence=RCA] [GO:0010584 "pollen exine
formation" evidence=RCA] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GO:GO:0005634 GO:GO:0009555 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 EMBL:DQ446441
IPI:IPI00529104 RefSeq:NP_177921.2 UniGene:At.34354
ProteinModelPortal:Q1PFC2 SMR:Q1PFC2 STRING:Q1PFC2
EnsemblPlants:AT1G77980.1 GeneID:844133 KEGG:ath:AT1G77980
TAIR:At1g77980 InParanoid:Q1PFC2 OMA:TMEEYET PhylomeDB:Q1PFC2
ProtClustDB:CLSN2679793 ArrayExpress:Q1PFC2 Genevestigator:Q1PFC2
Uniprot:Q1PFC2
Length = 332
Score = 109 (43.4 bits), Expect = 0.00063, P = 0.00063
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+ ++ +KR + R V+FSKRR+GL+ KA E + +ALL+ SP SD G
Sbjct: 1 MGRVKLEIKRIENTTNRQVTFSKRRNGLIKKAYELSILCDIDIALLMFSP-SDRLSLFSG 59
Query: 64 HSSVDAVLDAFVN 76
+ ++ V ++N
Sbjct: 60 KTRIEDVFSRYIN 72
>TAIR|locus:2066050 [details] [associations]
symbol:AGL17 "AGAMOUS-like 17" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048578 "positive regulation of long-day
photoperiodism, flowering" evidence=IMP] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009556 "microsporogenesis"
evidence=RCA] [GO:0052543 "callose deposition in cell wall"
evidence=RCA] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455 EMBL:AC006340
EMBL:U20186 IPI:IPI00531185 PIR:H84614 RefSeq:NP_179848.1
UniGene:At.39413 ProteinModelPortal:Q38840 SMR:Q38840 IntAct:Q38840
STRING:Q38840 PRIDE:Q38840 EnsemblPlants:AT2G22630.1 GeneID:816794
KEGG:ath:AT2G22630 GeneFarm:3517 TAIR:At2g22630 InParanoid:Q38840
OMA:GHHELVD PhylomeDB:Q38840 ProtClustDB:CLSN2683748
ArrayExpress:Q38840 Genevestigator:Q38840 GermOnline:AT2G22630
GO:GO:0048578 Uniprot:Q38840
Length = 227
Score = 106 (42.4 bits), Expect = 0.00063, P = 0.00063
Identities = 27/85 (31%), Positives = 49/85 (57%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+ +I +++ D R V+FSKRR GL+ KA E + +++ L++ S + Y F
Sbjct: 1 MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFS--NTDKLYDFA 58
Query: 64 HSSVDAVLDAFVNNRAPEAADKELV 88
SSV + ++ F N A + ++EL+
Sbjct: 59 SSSVKSTIERF--NTA-KMEEQELM 80
>UNIPROTKB|H0YKY6 [details] [associations]
symbol:MEF2A "Myocyte-specific enhancer factor 2A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0000002 "mitochondrial genome
maintenance" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048311 "mitochondrion distribution"
evidence=IEA] [GO:0055005 "ventricular cardiac myofibril
development" evidence=IEA] [GO:0061337 "cardiac conduction"
evidence=IEA] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 SUPFAM:SSF55455
EMBL:AC022692 EMBL:AC015660 EMBL:AC103967 HGNC:HGNC:6993
Ensembl:ENST00000559903 Bgee:H0YKY6 Uniprot:H0YKY6
Length = 77
Score = 89 (36.4 bits), Expect = 0.00067, P = 0.00067
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+++I + R + R V+F+KR+ GL+ KA E + ++AL++ + S + +
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN--SSNKLFQYA 58
Query: 64 HSSVDAVLDAFVNNRAP 80
+ +D VL + P
Sbjct: 59 STDMDKVLLKYTEYNEP 75
>UNIPROTKB|H0YM62 [details] [associations]
symbol:MEF2A "Myocyte-specific enhancer factor 2A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0000002 "mitochondrial genome
maintenance" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048311 "mitochondrion distribution"
evidence=IEA] [GO:0055005 "ventricular cardiac myofibril
development" evidence=IEA] [GO:0061337 "cardiac conduction"
evidence=IEA] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 SUPFAM:SSF55455
EMBL:AC022692 EMBL:AC015660 EMBL:AC103967 HGNC:HGNC:6993
Ensembl:ENST00000560493 Bgee:H0YM62 Uniprot:H0YM62
Length = 85
Score = 89 (36.4 bits), Expect = 0.00067, P = 0.00067
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+++I + R + R V+F+KR+ GL+ KA E + ++AL++ + S + +
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN--SSNKLFQYA 58
Query: 64 HSSVDAVLDAFVNNRAP 80
+ +D VL + P
Sbjct: 59 STDMDKVLLKYTEYNEP 75
>UNIPROTKB|I3L7L3 [details] [associations]
symbol:LOC100738718 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
SMART:SM00432 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 SUPFAM:SSF55455 GeneTree:ENSGT00390000011828
EMBL:CU618336 Ensembl:ENSSSCT00000024093 OMA:SMGRKKI Uniprot:I3L7L3
Length = 94
Score = 89 (36.4 bits), Expect = 0.00067, P = 0.00067
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+++I + R + R V+F+KR+ GL+ KA E + ++AL++ + S + +
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN--SSNKLFQYA 58
Query: 64 HSSVDAVLDAFVNNRAP 80
+ +D VL + P
Sbjct: 59 STDMDKVLLKYTEYNEP 75
>SGD|S000004645 [details] [associations]
symbol:ARG80 "Transcription factor involved in regulating
arginine-responsive genes" species:4932 "Saccharomyces cerevisiae"
[GO:0000987 "core promoter proximal region sequence-specific DNA
binding" evidence=IDA;IMP] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006525 "arginine
metabolic process" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0000982 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=IC;ISA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:1900081 "regulation of arginine
catabolic process" evidence=IMP] [GO:1900079 "regulation of
arginine biosynthetic process" evidence=IMP] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
SMART:SM00432 SGD:S000004645 GO:GO:0005634 GO:GO:0045944
EMBL:BK006946 GO:GO:0000987 GO:GO:0000982 eggNOG:COG5068
SUPFAM:SSF55455 EMBL:Z48502 GO:GO:0006525 EMBL:X05327 EMBL:AY692845
PIR:S05822 RefSeq:NP_013756.1 ProteinModelPortal:P07249 SMR:P07249
DIP:DIP-2404N IntAct:P07249 MINT:MINT-543861 STRING:P07249
EnsemblFungi:YMR042W GeneID:855059 KEGG:sce:YMR042W CYGD:YMR042w
GeneTree:ENSGT00400000022158 KO:K09265 OrthoDB:EOG4P2TC4
NextBio:978312 Genevestigator:P07249 GermOnline:YMR042W
GO:GO:1900079 GO:GO:1900081 Uniprot:P07249
Length = 177
Score = 102 (41.0 bits), Expect = 0.00084, P = 0.00084
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
V +R+ P++ + K +R V+FSKRRHG++ KA E + T + + LL+ + + YTF
Sbjct: 78 VTRRKQPIRYIENKTRRHVTFSKRRHGIMKKAYELSVLTGANILLLILA--NSGLVYTFT 135
Query: 64 HSSVDAVL 71
++ V+
Sbjct: 136 TPKLEPVV 143
>TAIR|locus:2102990 [details] [associations]
symbol:AGL57 "AGAMOUS-like 57" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11831
HOGENOM:HOG000238700 EMBL:AC016829 EMBL:DQ056586 IPI:IPI00531240
RefSeq:NP_187060.1 UniGene:At.53175 ProteinModelPortal:Q9M8W6
SMR:Q9M8W6 IntAct:Q9M8W6 PRIDE:Q9M8W6 EnsemblPlants:AT3G04100.1
GeneID:819565 KEGG:ath:AT3G04100 TAIR:At3g04100 InParanoid:Q9M8W6
OMA:VEVAFLI PhylomeDB:Q9M8W6 ProtClustDB:CLSN2913500
ArrayExpress:Q9M8W6 Genevestigator:Q9M8W6 Uniprot:Q9M8W6
Length = 207
Score = 104 (41.7 bits), Expect = 0.00086, P = 0.00086
Identities = 39/135 (28%), Positives = 59/135 (43%)
Query: 5 GKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFGH 64
GK++I +K+ + R ++FSKR+ G+ K E ++A L+ S YTF H
Sbjct: 14 GKQKIEMKKVENYGDRMITFSKRKTGIFKKMNELVAMCDVEVAFLIFSQPKKP--YTFAH 71
Query: 65 SSVDAVLDAFVNNRAPEAADKELVRLGISMFNEVKDLELYDKKISKAIKSDGNLEREGFW 124
S+ V D N E +++ R + + K L+D +K LE E
Sbjct: 72 PSMKKVADRLKNPSRQEPLERDDTRPLVEAY---KKRRLHD-----LVKKMEALEEE-LA 122
Query: 125 EDYEKLGNSDESIGE 139
D EKL ES E
Sbjct: 123 MDLEKLKLLKESRNE 137
>UNIPROTKB|D6RB91 [details] [associations]
symbol:MEF2C "Myocyte-specific enhancer factor 2C"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 SUPFAM:SSF55455 InterPro:IPR022102
Pfam:PF12347 EMBL:AC008525 EMBL:AC008835 HGNC:HGNC:6996
ChiTaRS:MEF2C IPI:IPI00967652 ProteinModelPortal:D6RB91 SMR:D6RB91
Ensembl:ENST00000507984 HOGENOM:HOG000197845 ArrayExpress:D6RB91
Bgee:D6RB91 Uniprot:D6RB91
Length = 120
Score = 88 (36.0 bits), Expect = 0.00087, P = 0.00087
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+++I + R + R V+F+KR+ GL+ KA E + ++AL++ + S + +
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN--STNKLFQYA 58
Query: 64 HSSVDAVLDAFVNNRAP 80
+ +D VL + P
Sbjct: 59 STDMDKVLLKYTEYNEP 75
>UNIPROTKB|D6RG14 [details] [associations]
symbol:MEF2C "Myocyte-specific enhancer factor 2C"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0000165 "MAPK cascade" evidence=IEA]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IEA] [GO:0000987 "core promoter proximal
region sequence-specific DNA binding" evidence=IEA] [GO:0001046
"core promoter sequence-specific DNA binding" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0001782 "B cell
homeostasis" evidence=IEA] [GO:0001947 "heart looping"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001974 "blood vessel remodeling" evidence=IEA] [GO:0002062
"chondrocyte differentiation" evidence=IEA] [GO:0002467 "germinal
center formation" evidence=IEA] [GO:0002634 "regulation of germinal
center formation" evidence=IEA] [GO:0003138 "primary heart field
specification" evidence=IEA] [GO:0003139 "secondary heart field
specification" evidence=IEA] [GO:0003151 "outflow tract
morphogenesis" evidence=IEA] [GO:0003185 "sinoatrial valve
morphogenesis" evidence=IEA] [GO:0003211 "cardiac ventricle
formation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006959
"humoral immune response" evidence=IEA] [GO:0007521 "muscle cell
fate determination" evidence=IEA] [GO:0007611 "learning or memory"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0010694 "positive regulation of alkaline
phosphatase activity" evidence=IEA] [GO:0014033 "neural crest cell
differentiation" evidence=IEA] [GO:0014898 "cardiac muscle
hypertrophy in response to stress" evidence=IEA] [GO:0021542
"dentate gyrus development" evidence=IEA] [GO:0030220 "platelet
formation" evidence=IEA] [GO:0030224 "monocyte differentiation"
evidence=IEA] [GO:0030318 "melanocyte differentiation"
evidence=IEA] [GO:0030501 "positive regulation of bone
mineralization" evidence=IEA] [GO:0030890 "positive regulation of B
cell proliferation" evidence=IEA] [GO:0033197 "response to vitamin
E" evidence=IEA] [GO:0035690 "cellular response to drug"
evidence=IEA] [GO:0035914 "skeletal muscle cell differentiation"
evidence=IEA] [GO:0035984 "cellular response to trichostatin A"
evidence=IEA] [GO:0042100 "B cell proliferation" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0045652 "regulation of megakaryocyte differentiation"
evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA] [GO:0045669 "positive regulation of
osteoblast differentiation" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0048703 "embryonic viscerocranium
morphogenesis" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0050853 "B cell
receptor signaling pathway" evidence=IEA] [GO:0051145 "smooth
muscle cell differentiation" evidence=IEA] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0060025 "regulation of
synaptic activity" evidence=IEA] [GO:0060045 "positive regulation
of cardiac muscle cell proliferation" evidence=IEA] [GO:0060297
"regulation of sarcomere organization" evidence=IEA] [GO:0060536
"cartilage morphogenesis" evidence=IEA] [GO:0071222 "cellular
response to lipopolysaccharide" evidence=IEA] [GO:0071277 "cellular
response to calcium ion" evidence=IEA] [GO:0071300 "cellular
response to retinoic acid" evidence=IEA] [GO:0071333 "cellular
response to glucose stimulus" evidence=IEA] [GO:0071498 "cellular
response to fluid shear stress" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0071864 "positive regulation of
cell proliferation in bone marrow" evidence=IEA] [GO:0072102
"glomerulus morphogenesis" evidence=IEA] [GO:0072160 "nephron
tubule epithelial cell differentiation" evidence=IEA] [GO:0090073
"positive regulation of protein homodimerization activity"
evidence=IEA] [GO:2000111 "positive regulation of macrophage
apoptotic process" evidence=IEA] [GO:2000727 "positive regulation
of cardiac muscle cell differentiation" evidence=IEA] [GO:2000987
"positive regulation of behavioral fear response" evidence=IEA]
[GO:2001013 "epithelial cell proliferation involved in renal tubule
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 GO:GO:0005634 GO:GO:0000165
GO:GO:0071277 GO:GO:0043524 GO:GO:0003682 GO:GO:0071222
GO:GO:0003705 GO:GO:0001077 GO:GO:0000122 GO:GO:0007611
GO:GO:0000987 GO:GO:0035690 GO:GO:0048666 GO:GO:0001974
GO:GO:0030890 GO:GO:0010694 GO:GO:0030501 GO:GO:0045669
GO:GO:0051145 GO:GO:0002467 GO:GO:0045666 SUPFAM:SSF55455
GO:GO:0001568 GO:GO:0001947 GO:GO:0006959 GO:GO:0001649
GO:GO:0060021 GO:GO:0002062 GO:GO:0050680 GO:GO:0014898
GO:GO:0035914 GO:GO:0003151 GO:GO:0030318 GO:GO:0000977
GO:GO:0001782 GO:GO:0001046 GO:GO:0050853 GO:GO:0042100
GO:GO:0002634 GO:GO:0060045 GO:GO:0001958 GO:GO:0030224
GO:GO:0003139 GO:GO:2000111 GO:GO:0048703 GO:GO:0060536
GO:GO:0090073 GO:GO:2000987 GO:GO:2000727 GO:GO:0030220
GO:GO:0060025 GO:GO:0071498 GO:GO:0007521 GO:GO:0071864
GO:GO:0045652 GO:GO:0003211 GO:GO:0035984 GO:GO:2001013
GO:GO:0072102 GO:GO:0072160 GO:GO:0014033 GO:GO:0003138
GO:GO:0060297 GO:GO:0003185 GO:GO:0055012 EMBL:AC008525
EMBL:AC008835 HGNC:HGNC:6996 ChiTaRS:MEF2C IPI:IPI00967981
ProteinModelPortal:D6RG14 SMR:D6RG14 Ensembl:ENST00000503075
ArrayExpress:D6RG14 Bgee:D6RG14 Uniprot:D6RG14
Length = 87
Score = 88 (36.0 bits), Expect = 0.00087, P = 0.00087
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+++I + R + R V+F+KR+ GL+ KA E + ++AL++ + S + +
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN--STNKLFQYA 58
Query: 64 HSSVDAVLDAFVNNRAP 80
+ +D VL + P
Sbjct: 59 STDMDKVLLKYTEYNEP 75
>UNIPROTKB|D6RJA7 [details] [associations]
symbol:MEF2C "Myocyte-specific enhancer factor 2C"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0007521
"muscle cell fate determination" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0010629 "negative regulation
of gene expression" evidence=IEA] [GO:0010694 "positive regulation
of alkaline phosphatase activity" evidence=IEA] [GO:0014033 "neural
crest cell differentiation" evidence=IEA] [GO:0014898 "cardiac
muscle hypertrophy in response to stress" evidence=IEA] [GO:0021542
"dentate gyrus development" evidence=IEA] [GO:0030220 "platelet
formation" evidence=IEA] [GO:0030224 "monocyte differentiation"
evidence=IEA] [GO:0030318 "melanocyte differentiation"
evidence=IEA] [GO:0030501 "positive regulation of bone
mineralization" evidence=IEA] [GO:0030890 "positive regulation of B
cell proliferation" evidence=IEA] [GO:0033197 "response to vitamin
E" evidence=IEA] [GO:0035690 "cellular response to drug"
evidence=IEA] [GO:0035914 "skeletal muscle cell differentiation"
evidence=IEA] [GO:0035984 "cellular response to trichostatin A"
evidence=IEA] [GO:0042100 "B cell proliferation" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0045652 "regulation of megakaryocyte differentiation"
evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA] [GO:0045669 "positive regulation of
osteoblast differentiation" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0048703 "embryonic viscerocranium
morphogenesis" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0050853 "B cell
receptor signaling pathway" evidence=IEA] [GO:0051145 "smooth
muscle cell differentiation" evidence=IEA] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0060025 "regulation of
synaptic activity" evidence=IEA] [GO:0060045 "positive regulation
of cardiac muscle cell proliferation" evidence=IEA] [GO:0060297
"regulation of sarcomere organization" evidence=IEA] [GO:0060536
"cartilage morphogenesis" evidence=IEA] [GO:0071222 "cellular
response to lipopolysaccharide" evidence=IEA] [GO:0071277 "cellular
response to calcium ion" evidence=IEA] [GO:0071300 "cellular
response to retinoic acid" evidence=IEA] [GO:0071333 "cellular
response to glucose stimulus" evidence=IEA] [GO:0071498 "cellular
response to fluid shear stress" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0071864 "positive regulation of
cell proliferation in bone marrow" evidence=IEA] [GO:0072102
"glomerulus morphogenesis" evidence=IEA] [GO:0072160 "nephron
tubule epithelial cell differentiation" evidence=IEA] [GO:0090073
"positive regulation of protein homodimerization activity"
evidence=IEA] [GO:2000111 "positive regulation of macrophage
apoptotic process" evidence=IEA] [GO:2000727 "positive regulation
of cardiac muscle cell differentiation" evidence=IEA] [GO:2000987
"positive regulation of behavioral fear response" evidence=IEA]
[GO:2001013 "epithelial cell proliferation involved in renal tubule
morphogenesis" evidence=IEA] [GO:0000165 "MAPK cascade"
evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0000987 "core
promoter proximal region sequence-specific DNA binding"
evidence=IEA] [GO:0001046 "core promoter sequence-specific DNA
binding" evidence=IEA] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IEA] [GO:0001568 "blood vessel development" evidence=IEA]
[GO:0001649 "osteoblast differentiation" evidence=IEA] [GO:0001782
"B cell homeostasis" evidence=IEA] [GO:0001947 "heart looping"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001974 "blood vessel remodeling" evidence=IEA] [GO:0002062
"chondrocyte differentiation" evidence=IEA] [GO:0002467 "germinal
center formation" evidence=IEA] [GO:0002634 "regulation of germinal
center formation" evidence=IEA] [GO:0003138 "primary heart field
specification" evidence=IEA] [GO:0003139 "secondary heart field
specification" evidence=IEA] [GO:0003151 "outflow tract
morphogenesis" evidence=IEA] [GO:0003185 "sinoatrial valve
morphogenesis" evidence=IEA] [GO:0003211 "cardiac ventricle
formation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 GO:GO:0005634 GO:GO:0000165
GO:GO:0071277 GO:GO:0043524 GO:GO:0003682 GO:GO:0071222
GO:GO:0003705 GO:GO:0001077 GO:GO:0000122 GO:GO:0007611
GO:GO:0000987 GO:GO:0035690 GO:GO:0048666 GO:GO:0001974
GO:GO:0030890 GO:GO:0010694 GO:GO:0030501 GO:GO:0045669
GO:GO:0051145 GO:GO:0002467 GO:GO:0045666 SUPFAM:SSF55455
GO:GO:0001568 GO:GO:0001947 GO:GO:0006959 GO:GO:0001649
GO:GO:0060021 GO:GO:0002062 GO:GO:0050680 GO:GO:0014898
GO:GO:0035914 GO:GO:0003151 GO:GO:0030318 GO:GO:0000977
GO:GO:0001782 GO:GO:0001046 GO:GO:0050853 GO:GO:0042100
GO:GO:0002634 GO:GO:0060045 GO:GO:0001958 GO:GO:0030224
GO:GO:0003139 GO:GO:2000111 GO:GO:0048703 GO:GO:0060536
GO:GO:0090073 GO:GO:2000987 GO:GO:2000727 GO:GO:0030220
GO:GO:0060025 GO:GO:0071498 GO:GO:0007521 GO:GO:0071864
GO:GO:0045652 HOGENOM:HOG000230620 GO:GO:0003211 GO:GO:0035984
GO:GO:2001013 GO:GO:0072102 GO:GO:0072160 GO:GO:0014033
GO:GO:0003138 GO:GO:0060297 GO:GO:0003185 GO:GO:0055012
EMBL:AC008525 EMBL:AC008835 HGNC:HGNC:6996 ChiTaRS:MEF2C
IPI:IPI00964921 ProteinModelPortal:D6RJA7 SMR:D6RJA7
Ensembl:ENST00000502831 ArrayExpress:D6RJA7 Bgee:D6RJA7
Uniprot:D6RJA7
Length = 98
Score = 88 (36.0 bits), Expect = 0.00087, P = 0.00087
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 4 VGKRRIPLKRRDTKEQRAVSFSKRRHGLLNKAAEYCLRTRSQLALLVSSPVSDTTFYTFG 63
+G+++I + R + R V+F+KR+ GL+ KA E + ++AL++ + S + +
Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFN--STNKLFQYA 58
Query: 64 HSSVDAVLDAFVNNRAP 80
+ +D VL + P
Sbjct: 59 STDMDKVLLKYTEYNEP 75
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.379 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 225 203 0.00092 111 3 11 22 0.37 33
31 0.46 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 70
No. of states in DFA: 584 (62 KB)
Total size of DFA: 154 KB (2093 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.21u 0.11s 18.32t Elapsed: 00:00:01
Total cpu time: 18.21u 0.11s 18.32t Elapsed: 00:00:01
Start: Thu May 9 22:41:49 2013 End: Thu May 9 22:41:50 2013