Your job contains 1 sequence.
>042240
MQRVVESVYKSKMGKQKSPNGNVSPLMKYWSSSSTSSSSSSSRSALSMGPFSPVPIMSKS
NSGSSSSHLSAVDEEDVYVMDGLPIMRYSPSPSPSPSPSSSSSSSSSSKTELCRSREEVG
MCRFGTKCQFAHGKEELRSTLFPTTKNKSEVMTDSALVLTIQMEDHSMKASVCESPVTPV
TFKPRLTNTAIKPEHTRKTTALVNKDVQSRATSTSSRDNWSPQDDGIEVTLPCHPSKTPP
R
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042240
(241 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
DICTYBASE|DDB_G0285973 - symbol:DDB_G0285973 "Butyrate re... 138 3.9e-08 1
UNIPROTKB|G3V2D5 - symbol:ZFP36L1 "Zinc finger protein 36... 122 6.5e-07 1
UNIPROTKB|G3V2P5 - symbol:ZFP36L1 "Zinc finger protein 36... 122 2.7e-06 1
ZFIN|ZDB-GENE-030131-6366 - symbol:zgc:162730 "zgc:162730... 125 4.4e-06 1
UNIPROTKB|F1LVT2 - symbol:F1LVT2 "Uncharacterized protein... 126 6.3e-06 1
UNIPROTKB|A4IIN5 - symbol:zfp36l2 "Zinc finger protein 36... 123 8.1e-06 1
UNIPROTKB|Q7ZXW9 - symbol:zfp36l2-A "Zinc finger protein ... 123 9.6e-06 1
MGI|MGI:107945 - symbol:Zfp36l2 "zinc finger protein 36, ... 123 9.8e-06 1
RGD|1559581 - symbol:Zfp36l3 "zinc finger protein 36, C3H... 126 1.1e-05 1
UNIPROTKB|A7MB98 - symbol:ZFP36L1 "Uncharacterized protei... 122 1.1e-05 1
UNIPROTKB|E2R2W0 - symbol:ZFP36L1 "Uncharacterized protei... 122 1.1e-05 1
UNIPROTKB|Q07352 - symbol:ZFP36L1 "Zinc finger protein 36... 122 1.1e-05 1
UNIPROTKB|I3LB77 - symbol:ZFP36L1 "Uncharacterized protei... 122 1.1e-05 1
MGI|MGI:107946 - symbol:Zfp36l1 "zinc finger protein 36, ... 122 1.1e-05 1
RGD|62009 - symbol:Zfp36l1 "zinc finger protein 36, C3H t... 122 1.1e-05 1
UNIPROTKB|P17431 - symbol:Zfp36l1 "Zinc finger protein 36... 122 1.1e-05 1
ZFIN|ZDB-GENE-030131-2391 - symbol:zfp36l1b "zinc finger ... 122 1.2e-05 1
UNIPROTKB|Q805B4 - symbol:zfp36l2-B "Zinc finger protein ... 122 1.3e-05 1
UNIPROTKB|F1MV20 - symbol:F1MV20 "Uncharacterized protein... 123 1.3e-05 1
RGD|1308913 - symbol:Zfp36l2 "zinc finger protein 36, C3H... 123 1.5e-05 1
UNIPROTKB|J9NWC9 - symbol:ZFP36L2 "Uncharacterized protei... 123 1.6e-05 1
UNIPROTKB|F1S5I0 - symbol:ZFP36L2 "Uncharacterized protei... 123 1.6e-05 1
UNIPROTKB|P47974 - symbol:ZFP36L2 "Zinc finger protein 36... 123 1.6e-05 1
ZFIN|ZDB-GENE-030131-9860 - symbol:zfp36l1a "zinc finger ... 121 1.8e-05 1
UNIPROTKB|J9NTC7 - symbol:ZFP36 "Uncharacterized protein"... 119 2.1e-05 1
UNIPROTKB|E2RKS9 - symbol:ZFP36 "Uncharacterized protein"... 119 2.6e-05 1
ZFIN|ZDB-GENE-050913-48 - symbol:zgc:114130 "zgc:114130" ... 120 2.8e-05 1
FB|FBgn0011837 - symbol:Tis11 "Tis11 homolog" species:722... 120 3.3e-05 1
RGD|620722 - symbol:Zfp36 "zinc finger protein 36" specie... 117 4.6e-05 1
UNIPROTKB|P47973 - symbol:Zfp36 "Tristetraprolin" species... 117 4.6e-05 1
ZFIN|ZDB-GENE-030131-5873 - symbol:zfp36l2 "zinc finger p... 118 4.6e-05 1
MGI|MGI:99180 - symbol:Zfp36 "zinc finger protein 36" spe... 116 6.0e-05 1
UNIPROTKB|G3MWV8 - symbol:ZFP36 "Tristetraprolin" species... 116 6.2e-05 1
UNIPROTKB|P53781 - symbol:ZFP36 "Tristetraprolin" species... 116 6.2e-05 1
UNIPROTKB|Q0VCR3 - symbol:ZFP36 "Tristetraprolin" species... 116 6.2e-05 1
UNIPROTKB|D0VE66 - symbol:LOC100623625 "Tristetraprolin" ... 116 6.3e-05 1
UNIPROTKB|Q6S9E0 - symbol:ZFP36 "Tristetraprolin" species... 115 8.5e-05 1
UNIPROTKB|P26651 - symbol:ZFP36 "Tristetraprolin" species... 115 8.6e-05 1
POMBASE|SPBC1718.07c - symbol:zfs1 "CCCH tandem zinc fing... 104 0.00037 2
>DICTYBASE|DDB_G0285973 [details] [associations]
symbol:DDB_G0285973 "Butyrate response factor 2"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 dictyBase:DDB_G0285973 GO:GO:0008270 GO:GO:0003676
EMBL:AAFI02000082 eggNOG:COG5063 RefSeq:XP_637949.2
ProteinModelPortal:Q54MG5 SMR:Q54MG5 EnsemblProtists:DDB0218764
GeneID:8625376 KEGG:ddi:DDB_G0285973 InParanoid:Q54MG5 OMA:WSSDEAS
Uniprot:Q54MG5
Length = 437
Score = 138 (53.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 25/42 (59%), Positives = 33/42 (78%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELRSTL-FPTTKNKS 149
KTELCRS +E G+CR+G KCQFAHG++ELRS + P K ++
Sbjct: 197 KTELCRSFQETGVCRYGLKCQFAHGRDELRSVMRHPKYKTET 238
>UNIPROTKB|G3V2D5 [details] [associations]
symbol:ZFP36L1 "Zinc finger protein 36, C3H1 type-like 1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000288 "nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0033077 "T cell differentiation in
thymus" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0005829 GO:GO:0005634
GO:GO:0006417 GO:GO:0008270 GO:GO:0003729 GO:GO:0017091
GO:GO:0033077 GO:GO:0001570 GO:GO:0000288 HGNC:HGNC:1107
ChiTaRS:ZFP36L1 InterPro:IPR007635 Pfam:PF04553 EMBL:AL132986
ProteinModelPortal:G3V2D5 SMR:G3V2D5 Ensembl:ENST00000557022
ArrayExpress:G3V2D5 Bgee:G3V2D5 Uniprot:G3V2D5
Length = 176
Score = 122 (48.0 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 27/44 (61%), Positives = 31/44 (70%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELRS-TLFPTTKNKSEV 151
KTELCR EE G C++G KCQFAHG ELRS T P K K+E+
Sbjct: 94 KTELCRPFEENGACKYGDKCQFAHGIHELRSLTRHP--KYKTEL 135
>UNIPROTKB|G3V2P5 [details] [associations]
symbol:ZFP36L1 "Zinc finger protein 36, C3H1 type-like 1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 HGNC:HGNC:1107 ChiTaRS:ZFP36L1
InterPro:IPR007635 Pfam:PF04553 EMBL:AL132986
ProteinModelPortal:G3V2P5 SMR:G3V2P5 Ensembl:ENST00000557086
ArrayExpress:G3V2P5 Bgee:G3V2P5 Uniprot:G3V2P5
Length = 207
Score = 122 (48.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 27/44 (61%), Positives = 31/44 (70%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELRS-TLFPTTKNKSEV 151
KTELCR EE G C++G KCQFAHG ELRS T P K K+E+
Sbjct: 122 KTELCRPFEENGACKYGDKCQFAHGIHELRSLTRHP--KYKTEL 163
>ZFIN|ZDB-GENE-030131-6366 [details] [associations]
symbol:zgc:162730 "zgc:162730" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
ZFIN:ZDB-GENE-030131-6366 GO:GO:0008270 GO:GO:0003676
HOGENOM:HOG000233479 EMBL:BC139894 IPI:IPI00933596
UniGene:Dr.106159 STRING:A5D6V0 HOVERGEN:HBG105016
InParanoid:A5D6V0 OrthoDB:EOG4PK294 ArrayExpress:A5D6V0
Uniprot:A5D6V0
Length = 336
Score = 125 (49.1 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 24/42 (57%), Positives = 31/42 (73%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELRSTLFPTTKNKSE 150
KTELCRS +E G C++G KCQFAHG+ ELR L+ K K++
Sbjct: 114 KTELCRSFQEHGSCKYGAKCQFAHGENELRG-LYRHPKYKTQ 154
>UNIPROTKB|F1LVT2 [details] [associations]
symbol:F1LVT2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000289 "nuclear-transcribed mRNA poly(A)
tail shortening" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005737 GO:GO:0008270 GO:GO:0017091 GO:GO:0000289
GeneTree:ENSGT00530000063262 IPI:IPI00362311
Ensembl:ENSRNOT00000050601 Uniprot:F1LVT2
Length = 490
Score = 126 (49.4 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 27/42 (64%), Positives = 29/42 (69%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELRSTLFPTTKNKSE 150
KTELCR EE G CR+G KCQFAHG ELR TL K K+E
Sbjct: 143 KTELCRPFEENGTCRYGNKCQFAHGYHELR-TLSRHPKYKTE 183
>UNIPROTKB|A4IIN5 [details] [associations]
symbol:zfp36l2 "Zinc finger protein 36, C3H1 type-like 2"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043488
"regulation of mRNA stability" evidence=ISS] [GO:0048793
"pronephros development" evidence=ISS] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003723 GO:GO:0043488 GO:GO:0000288 eggNOG:COG5063
GO:GO:0048793 HOGENOM:HOG000233479 HOVERGEN:HBG008483
InterPro:IPR007635 Pfam:PF04553 CTD:678 EMBL:BC136091
RefSeq:NP_001096423.1 UniGene:Str.6563 STRING:A4IIN5
GeneID:100125029 KEGG:xtr:100125029 Xenbase:XB-GENE-971012
Uniprot:A4IIN5
Length = 333
Score = 123 (48.4 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 27/44 (61%), Positives = 31/44 (70%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELRS-TLFPTTKNKSEV 151
KTELCR EE G C++G KCQFAHG ELRS T P K K+E+
Sbjct: 103 KTELCRPFEESGACKYGEKCQFAHGFHELRSLTRHP--KYKTEL 144
>UNIPROTKB|Q7ZXW9 [details] [associations]
symbol:zfp36l2-A "Zinc finger protein 36, C3H1 type-like
2-A" species:8355 "Xenopus laevis" [GO:0000288 "nuclear-transcribed
mRNA catabolic process, deadenylation-dependent decay"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0043488 "regulation of mRNA
stability" evidence=ISS] [GO:0048793 "pronephros development"
evidence=ISS] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003723 GO:GO:0043488
GO:GO:0000288 HSSP:P22893 GO:GO:0048793 HOVERGEN:HBG008483
InterPro:IPR007635 Pfam:PF04553 EMBL:BC044086 EMBL:AF061982
RefSeq:NP_001080610.1 UniGene:Xl.23743 UniGene:Xl.476
ProteinModelPortal:Q7ZXW9 SMR:Q7ZXW9 GeneID:380302 KEGG:xla:380302
CTD:380302 Xenbase:XB-GENE-6256550 Uniprot:Q7ZXW9
Length = 363
Score = 123 (48.4 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 27/44 (61%), Positives = 31/44 (70%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELRS-TLFPTTKNKSEV 151
KTELCR EE G C++G KCQFAHG ELRS T P K K+E+
Sbjct: 133 KTELCRPFEESGACKYGEKCQFAHGFHELRSLTRHP--KYKTEL 174
>MGI|MGI:107945 [details] [associations]
symbol:Zfp36l2 "zinc finger protein 36, C3H type-like 2"
species:10090 "Mus musculus" [GO:0000288 "nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0033077 "T cell differentiation in thymus" evidence=IGI]
[GO:0043488 "regulation of mRNA stability" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 MGI:MGI:107945
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003723 GO:GO:0033077 GO:GO:0043488
GO:GO:0000288 eggNOG:COG5063 HOVERGEN:HBG008483 OrthoDB:EOG480HXD
InterPro:IPR007635 Pfam:PF04553 ChiTaRS:ZFP36L2 EMBL:M58564
EMBL:M97165 IPI:IPI00138319 PIR:C39590 UniGene:Mm.259321
ProteinModelPortal:P23949 SMR:P23949 STRING:P23949
PhosphoSite:P23949 PaxDb:P23949 PRIDE:P23949 InParanoid:P23949
CleanEx:MM_ZFP36L2 Genevestigator:P23949
GermOnline:ENSMUSG00000045817 Uniprot:P23949
Length = 367
Score = 123 (48.4 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 27/44 (61%), Positives = 31/44 (70%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELRS-TLFPTTKNKSEV 151
KTELCR EE G C++G KCQFAHG ELRS T P K K+E+
Sbjct: 128 KTELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHP--KYKTEL 169
>RGD|1559581 [details] [associations]
symbol:Zfp36l3 "zinc finger protein 36, C3H type-like 3"
species:10116 "Rattus norvegicus" [GO:0000288 "nuclear-transcribed
mRNA catabolic process, deadenylation-dependent decay"
evidence=ISO] [GO:0000289 "nuclear-transcribed mRNA poly(A) tail
shortening" evidence=ISO] [GO:0003723 "RNA binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0017091 "AU-rich element
binding" evidence=ISO] REFSEQ:XM_001053657 Ncbi:XP_001053657
Length = 722
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/42 (64%), Positives = 29/42 (69%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELRSTLFPTTKNKSE 150
KTELCR EE G CR+G KCQFAHG ELR TL K K+E
Sbjct: 123 KTELCRPFEENGTCRYGNKCQFAHGYHELR-TLSRHPKYKTE 163
>UNIPROTKB|A7MB98 [details] [associations]
symbol:ZFP36L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
[GO:0033077 "T cell differentiation in thymus" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0008270 GO:GO:0003676 GO:GO:0033077 GO:GO:0001570
GO:GO:0043488 GO:GO:0000288 eggNOG:COG5063
GeneTree:ENSGT00530000063262 CTD:677 HOGENOM:HOG000233479
HOVERGEN:HBG008483 OMA:HSYSFAG OrthoDB:EOG480HXD InterPro:IPR007635
Pfam:PF04553 EMBL:DAAA02029486 EMBL:BC151440 IPI:IPI00709262
RefSeq:NP_001094704.1 UniGene:Bt.61758 SMR:A7MB98 STRING:A7MB98
Ensembl:ENSBTAT00000035742 GeneID:614773 KEGG:bta:614773
InParanoid:A7MB98 NextBio:20899277 Uniprot:A7MB98
Length = 338
Score = 122 (48.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/44 (61%), Positives = 31/44 (70%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELRS-TLFPTTKNKSEV 151
KTELCR EE G C++G KCQFAHG ELRS T P K K+E+
Sbjct: 116 KTELCRPFEENGACKYGDKCQFAHGIHELRSLTRHP--KYKTEL 157
>UNIPROTKB|E2R2W0 [details] [associations]
symbol:ZFP36L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043488 "regulation of mRNA stability"
evidence=IEA] [GO:0033077 "T cell differentiation in thymus"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0000288 "nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0008270 GO:GO:0003676 GO:GO:0033077 GO:GO:0001570
GO:GO:0043488 GO:GO:0000288 GeneTree:ENSGT00530000063262 CTD:677
OMA:HSYSFAG InterPro:IPR007635 Pfam:PF04553 EMBL:AAEX03005803
RefSeq:XP_853070.1 Ensembl:ENSCAFT00000026141 GeneID:490748
KEGG:cfa:490748 NextBio:20863709 Uniprot:E2R2W0
Length = 338
Score = 122 (48.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/44 (61%), Positives = 31/44 (70%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELRS-TLFPTTKNKSEV 151
KTELCR EE G C++G KCQFAHG ELRS T P K K+E+
Sbjct: 116 KTELCRPFEENGACKYGDKCQFAHGIHELRSLTRHP--KYKTEL 157
>UNIPROTKB|Q07352 [details] [associations]
symbol:ZFP36L1 "Zinc finger protein 36, C3H1 type-like 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0033077 "T cell differentiation in
thymus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IDA] [GO:0043488 "regulation of
mRNA stability" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=NAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] Reactome:REACT_71 Reactome:REACT_21257
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005829 GO:GO:0005634 GO:GO:0010467 GO:GO:0016071
GO:GO:0006417 PDB:1W0V PDB:1W0W PDBsum:1W0V PDBsum:1W0W
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003729
GO:GO:0003700 GO:GO:0017091 GO:GO:0033077 GO:GO:0001570
GO:GO:0043488 GO:GO:0000288 eggNOG:COG5063 CleanEx:HS_BRF1
EMBL:X79066 EMBL:X79067 EMBL:X99404 EMBL:BT019468 EMBL:BC018340
IPI:IPI00016635 PIR:S34854 RefSeq:NP_001231627.1
RefSeq:NP_001231630.1 RefSeq:NP_004917.2 UniGene:Hs.85155
ProteinModelPortal:Q07352 SMR:Q07352 IntAct:Q07352
MINT:MINT-1375566 STRING:Q07352 PhosphoSite:Q07352 DMDM:1351254
PaxDb:Q07352 PeptideAtlas:Q07352 PRIDE:Q07352 DNASU:677
Ensembl:ENST00000336440 Ensembl:ENST00000439696 GeneID:677
KEGG:hsa:677 UCSC:uc001xkh.2 CTD:677 GeneCards:GC14M069254
HGNC:HGNC:1107 HPA:HPA001301 MIM:601064 neXtProt:NX_Q07352
PharmGKB:PA35027 HOGENOM:HOG000233479 HOVERGEN:HBG008483
InParanoid:Q07352 OMA:HSYSFAG OrthoDB:EOG480HXD PhylomeDB:Q07352
ChiTaRS:ZFP36L1 EvolutionaryTrace:Q07352 GenomeRNAi:677
NextBio:2790 ArrayExpress:Q07352 Bgee:Q07352 CleanEx:HS_ZFP36L1
Genevestigator:Q07352 GermOnline:ENSG00000185650 InterPro:IPR007635
Pfam:PF04553 Uniprot:Q07352
Length = 338
Score = 122 (48.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/44 (61%), Positives = 31/44 (70%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELRS-TLFPTTKNKSEV 151
KTELCR EE G C++G KCQFAHG ELRS T P K K+E+
Sbjct: 116 KTELCRPFEENGACKYGDKCQFAHGIHELRSLTRHP--KYKTEL 157
>UNIPROTKB|I3LB77 [details] [associations]
symbol:ZFP36L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
[GO:0033077 "T cell differentiation in thymus" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0008270 GO:GO:0003676 GO:GO:0033077 GO:GO:0001570
GO:GO:0043488 GO:GO:0000288 GeneTree:ENSGT00530000063262 CTD:677
OMA:HSYSFAG InterPro:IPR007635 Pfam:PF04553 EMBL:CT956041
RefSeq:XP_003356787.1 Ensembl:ENSSSCT00000022695 GeneID:100624279
KEGG:ssc:100624279 Uniprot:I3LB77
Length = 338
Score = 122 (48.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/44 (61%), Positives = 31/44 (70%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELRS-TLFPTTKNKSEV 151
KTELCR EE G C++G KCQFAHG ELRS T P K K+E+
Sbjct: 116 KTELCRPFEENGACKYGDKCQFAHGIHELRSLTRHP--KYKTEL 157
>MGI|MGI:107946 [details] [associations]
symbol:Zfp36l1 "zinc finger protein 36, C3H type-like 1"
species:10090 "Mus musculus" [GO:0000288 "nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=IDA]
[GO:0001570 "vasculogenesis" evidence=IMP] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=ISO] [GO:0006402 "mRNA catabolic process"
evidence=ISO] [GO:0006417 "regulation of translation" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017091 "AU-rich
element binding" evidence=ISO] [GO:0033077 "T cell differentiation
in thymus" evidence=IGI] [GO:0043488 "regulation of mRNA stability"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
MGI:MGI:107946 GO:GO:0005829 GO:GO:0005634 GO:GO:0006417
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003729
GO:GO:0017091 GO:GO:0033077 GO:GO:0001570 GO:GO:0043488
GO:GO:0000288 eggNOG:COG5063 CTD:677 HOGENOM:HOG000233479
HOVERGEN:HBG008483 OMA:HSYSFAG OrthoDB:EOG480HXD ChiTaRS:ZFP36L1
InterPro:IPR007635 Pfam:PF04553 EMBL:M58566 IPI:IPI00138335
PIR:B39590 RefSeq:NP_031590.1 UniGene:Mm.235132
ProteinModelPortal:P23950 SMR:P23950 STRING:P23950
PhosphoSite:P23950 PRIDE:P23950 Ensembl:ENSMUST00000021552
Ensembl:ENSMUST00000165114 GeneID:12192 KEGG:mmu:12192
InParanoid:P23950 NextBio:280591 Bgee:P23950 CleanEx:MM_ZFP36L1
Genevestigator:P23950 GermOnline:ENSMUSG00000021127 Uniprot:P23950
Length = 338
Score = 122 (48.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/44 (61%), Positives = 31/44 (70%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELRS-TLFPTTKNKSEV 151
KTELCR EE G C++G KCQFAHG ELRS T P K K+E+
Sbjct: 116 KTELCRPFEENGACKYGDKCQFAHGIHELRSLTRHP--KYKTEL 157
>RGD|62009 [details] [associations]
symbol:Zfp36l1 "zinc finger protein 36, C3H type-like 1"
species:10116 "Rattus norvegicus" [GO:0000288 "nuclear-transcribed
mRNA catabolic process, deadenylation-dependent decay"
evidence=IEA;ISO] [GO:0001570 "vasculogenesis" evidence=IEA;ISO]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003729 "mRNA binding" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006402
"mRNA catabolic process" evidence=IDA] [GO:0006417 "regulation of
translation" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017091 "AU-rich element binding" evidence=IMP]
[GO:0033077 "T cell differentiation in thymus" evidence=IEA;ISO]
[GO:0043488 "regulation of mRNA stability" evidence=IEA;ISO]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
RGD:62009 GO:GO:0005829 GO:GO:0005634 GO:GO:0006417 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003729 GO:GO:0017091
GO:GO:0033077 GO:GO:0001570 GO:GO:0006402 GO:GO:0043488
GO:GO:0000288 eggNOG:COG5063 CTD:677 HOGENOM:HOG000233479
HOVERGEN:HBG008483 OrthoDB:EOG480HXD InterPro:IPR007635 Pfam:PF04553
EMBL:X52590 EMBL:X86571 IPI:IPI00188182 PIR:S10471
RefSeq:NP_058868.1 UniGene:Rn.6142 ProteinModelPortal:P17431
SMR:P17431 MINT:MINT-1210346 STRING:P17431 PhosphoSite:P17431
GeneID:29344 KEGG:rno:29344 UCSC:RGD:62009 InParanoid:P17431
NextBio:608836 ArrayExpress:P17431 Genevestigator:P17431
GermOnline:ENSRNOG00000030024 Uniprot:P17431
Length = 338
Score = 122 (48.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/44 (61%), Positives = 31/44 (70%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELRS-TLFPTTKNKSEV 151
KTELCR EE G C++G KCQFAHG ELRS T P K K+E+
Sbjct: 116 KTELCRPFEENGACKYGDKCQFAHGIHELRSLTRHP--KYKTEL 157
>UNIPROTKB|P17431 [details] [associations]
symbol:Zfp36l1 "Zinc finger protein 36, C3H1 type-like 1"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 RGD:62009 GO:GO:0005829 GO:GO:0005634 GO:GO:0006417
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003729
GO:GO:0017091 GO:GO:0033077 GO:GO:0001570 GO:GO:0006402
GO:GO:0043488 GO:GO:0000288 eggNOG:COG5063 CTD:677
HOGENOM:HOG000233479 HOVERGEN:HBG008483 OrthoDB:EOG480HXD
InterPro:IPR007635 Pfam:PF04553 EMBL:X52590 EMBL:X86571
IPI:IPI00188182 PIR:S10471 RefSeq:NP_058868.1 UniGene:Rn.6142
ProteinModelPortal:P17431 SMR:P17431 MINT:MINT-1210346
STRING:P17431 PhosphoSite:P17431 GeneID:29344 KEGG:rno:29344
UCSC:RGD:62009 InParanoid:P17431 NextBio:608836 ArrayExpress:P17431
Genevestigator:P17431 GermOnline:ENSRNOG00000030024 Uniprot:P17431
Length = 338
Score = 122 (48.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/44 (61%), Positives = 31/44 (70%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELRS-TLFPTTKNKSEV 151
KTELCR EE G C++G KCQFAHG ELRS T P K K+E+
Sbjct: 116 KTELCRPFEENGACKYGDKCQFAHGIHELRSLTRHP--KYKTEL 157
>ZFIN|ZDB-GENE-030131-2391 [details] [associations]
symbol:zfp36l1b "zinc finger protein 36, C3H
type-like 1b" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
ZFIN:ZDB-GENE-030131-2391 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00530000063262 HOGENOM:HOG000233479
HOVERGEN:HBG008483 InterPro:IPR007635 Pfam:PF04553 EMBL:BX649319
EMBL:BC063991 IPI:IPI00481341 RefSeq:NP_955943.1 UniGene:Dr.78307
SMR:Q6P3H0 Ensembl:ENSDART00000014168 GeneID:323671 KEGG:dre:323671
CTD:323671 InParanoid:Q6P3H0 OMA:SSITCIS NextBio:20808378
Uniprot:Q6P3H0
Length = 348
Score = 122 (48.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 26/43 (60%), Positives = 30/43 (69%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELRSTLFPTTKNKSEV 151
KTELCR EE G C++G KCQFAHG ELRS L K K+E+
Sbjct: 139 KTELCRPFEENGTCKYGDKCQFAHGMHELRS-LNRHPKYKTEL 180
>UNIPROTKB|Q805B4 [details] [associations]
symbol:zfp36l2-B "Zinc finger protein 36, C3H1 type-like
2-B" species:8355 "Xenopus laevis" [GO:0000288 "nuclear-transcribed
mRNA catabolic process, deadenylation-dependent decay"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0039020 "pronephric nephron tubule
development" evidence=IMP] [GO:0043488 "regulation of mRNA
stability" evidence=ISS] [GO:0048793 "pronephros development"
evidence=IMP] [GO:0072080 "nephron tubule development"
evidence=IMP] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003723 GO:GO:0043488
GO:GO:0000288 HSSP:P22893 GO:GO:0039020 HOVERGEN:HBG008483
InterPro:IPR007635 Pfam:PF04553 EMBL:AF061982 UniGene:Xl.476
EMBL:AB097482 EMBL:BC084221 RefSeq:NP_001081886.1
ProteinModelPortal:Q805B4 SMR:Q805B4 GeneID:398103 KEGG:xla:398103
CTD:398103 Xenbase:XB-GENE-971016 Uniprot:Q805B4
Length = 364
Score = 122 (48.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 27/44 (61%), Positives = 31/44 (70%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELRS-TLFPTTKNKSEV 151
KTELCR EE G C++G KCQFAHG ELRS T P K K+E+
Sbjct: 135 KTELCRPFEENGACKYGEKCQFAHGFHELRSLTRHP--KYKTEL 176
>UNIPROTKB|F1MV20 [details] [associations]
symbol:F1MV20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0008270
GO:GO:0003676 GO:GO:0043488 GO:GO:0000288
GeneTree:ENSGT00530000063262 InterPro:IPR007635 Pfam:PF04553
OMA:PLAIQTH EMBL:DAAA02030674 IPI:IPI00695139
Ensembl:ENSBTAT00000004621 Uniprot:F1MV20
Length = 438
Score = 123 (48.4 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 27/44 (61%), Positives = 31/44 (70%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELRS-TLFPTTKNKSEV 151
KTELCR EE G C++G KCQFAHG ELRS T P K K+E+
Sbjct: 151 KTELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHP--KYKTEL 192
>RGD|1308913 [details] [associations]
symbol:Zfp36l2 "zinc finger protein 36, C3H type-like 2"
species:10116 "Rattus norvegicus" [GO:0000288 "nuclear-transcribed
mRNA catabolic process, deadenylation-dependent decay"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0033077 "T cell differentiation in thymus" evidence=ISO]
[GO:0043488 "regulation of mRNA stability" evidence=ISO]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
RGD:1308913 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00530000063262 OrthoDB:EOG480HXD InterPro:IPR007635
Pfam:PF04553 CTD:678 OMA:PLAIQTH IPI:IPI00553840
RefSeq:NP_001031703.1 Ensembl:ENSRNOT00000006725 GeneID:298765
KEGG:rno:298765 UCSC:RGD:1308913 Uniprot:D3ZHK9
Length = 482
Score = 123 (48.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 27/44 (61%), Positives = 31/44 (70%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELRS-TLFPTTKNKSEV 151
KTELCR EE G C++G KCQFAHG ELRS T P K K+E+
Sbjct: 153 KTELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHP--KYKTEL 194
>UNIPROTKB|J9NWC9 [details] [associations]
symbol:ZFP36L2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 GeneTree:ENSGT00530000063262
InterPro:IPR007635 Pfam:PF04553 OMA:PLAIQTH EMBL:AAEX03007468
RefSeq:XP_003639394.1 Ensembl:ENSCAFT00000048010 GeneID:100856710
KEGG:cfa:100856710 Uniprot:J9NWC9
Length = 491
Score = 123 (48.4 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 27/44 (61%), Positives = 31/44 (70%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELRS-TLFPTTKNKSEV 151
KTELCR EE G C++G KCQFAHG ELRS T P K K+E+
Sbjct: 159 KTELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHP--KYKTEL 200
>UNIPROTKB|F1S5I0 [details] [associations]
symbol:ZFP36L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0008270
GO:GO:0003676 GO:GO:0043488 GO:GO:0000288
GeneTree:ENSGT00530000063262 InterPro:IPR007635 Pfam:PF04553
OMA:PLAIQTH EMBL:CU694628 RefSeq:XP_003125238.1
Ensembl:ENSSSCT00000009263 GeneID:100513591 KEGG:ssc:100513591
ArrayExpress:F1S5I0 Uniprot:F1S5I0
Length = 493
Score = 123 (48.4 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 27/44 (61%), Positives = 31/44 (70%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELRS-TLFPTTKNKSEV 151
KTELCR EE G C++G KCQFAHG ELRS T P K K+E+
Sbjct: 155 KTELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHP--KYKTEL 196
>UNIPROTKB|P47974 [details] [associations]
symbol:ZFP36L2 "Zinc finger protein 36, C3H1 type-like 2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000288 "nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0043488 "regulation of
mRNA stability" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] [GO:0008283 "cell proliferation"
evidence=TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0005634 GO:GO:0005737
EMBL:CH471053 GO:GO:0046872 GO:GO:0003677 GO:GO:0008283
GO:GO:0008270 GO:GO:0003700 GO:GO:0003723 GO:GO:0043488
GO:GO:0000288 CleanEx:HS_BRF2 eggNOG:COG5063 HOGENOM:HOG000233479
HOVERGEN:HBG008483 OrthoDB:EOG480HXD InterPro:IPR007635
Pfam:PF04553 EMBL:U07802 EMBL:X78992 EMBL:AC010883 EMBL:BC005010
IPI:IPI00604786 PIR:S49147 RefSeq:NP_008818.3 UniGene:Hs.503093
UniGene:Hs.705738 PDB:1RGO PDBsum:1RGO ProteinModelPortal:P47974
SMR:P47974 IntAct:P47974 STRING:P47974 PhosphoSite:P47974
DMDM:146291085 PRIDE:P47974 DNASU:678 Ensembl:ENST00000282388
GeneID:678 KEGG:hsa:678 UCSC:uc002rsv.4 CTD:678
GeneCards:GC02M043449 HGNC:HGNC:1108 HPA:HPA047428 MIM:612053
neXtProt:NX_P47974 PharmGKB:PA35028 InParanoid:P47974 OMA:PLAIQTH
PhylomeDB:P47974 ChiTaRS:ZFP36L2 EvolutionaryTrace:P47974
GenomeRNAi:678 NextBio:2794 Bgee:P47974 CleanEx:HS_ZFP36L2
Genevestigator:P47974 GermOnline:ENSG00000152518 Uniprot:P47974
Length = 494
Score = 123 (48.4 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 27/44 (61%), Positives = 31/44 (70%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELRS-TLFPTTKNKSEV 151
KTELCR EE G C++G KCQFAHG ELRS T P K K+E+
Sbjct: 155 KTELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHP--KYKTEL 196
>ZFIN|ZDB-GENE-030131-9860 [details] [associations]
symbol:zfp36l1a "zinc finger protein 36, C3H
type-like 1a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
ZFIN:ZDB-GENE-030131-9860 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5063 HOGENOM:HOG000233479 HOVERGEN:HBG008483
OrthoDB:EOG480HXD InterPro:IPR007635 Pfam:PF04553 EMBL:BC124505
IPI:IPI00482112 RefSeq:NP_001070621.1 UniGene:Dr.105582
UniGene:Dr.107563 UniGene:Dr.31482 UniGene:Dr.76498
ProteinModelPortal:Q08BY3 SMR:Q08BY3 GeneID:561280 KEGG:dre:561280
CTD:561280 InParanoid:Q08BY3 NextBio:20883849 Uniprot:Q08BY3
Length = 374
Score = 121 (47.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 26/43 (60%), Positives = 30/43 (69%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELRSTLFPTTKNKSEV 151
KTELCR EE G C++G KCQFAHG ELRS L K K+E+
Sbjct: 146 KTELCRPFEENGACKYGDKCQFAHGIHELRS-LSRHPKYKTEL 187
>UNIPROTKB|J9NTC7 [details] [associations]
symbol:ZFP36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 GeneTree:ENSGT00530000063262 EMBL:AAEX03000957
Ensembl:ENSCAFT00000042970 Uniprot:J9NTC7
Length = 294
Score = 119 (46.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 24/41 (58%), Positives = 28/41 (68%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELR-STLFPTTKNK 148
KTELCR+ E G CR+G KCQFAHG ELR ++ P K K
Sbjct: 108 KTELCRTFSESGRCRYGAKCQFAHGLGELRQASRHPKYKTK 148
>UNIPROTKB|E2RKS9 [details] [associations]
symbol:ZFP36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071889 "14-3-3 protein binding"
evidence=IEA] [GO:0070935 "3'-UTR-mediated mRNA stabilization"
evidence=IEA] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening" evidence=IEA]
[GO:0050779 "RNA destabilization" evidence=IEA] [GO:0050728
"negative regulation of inflammatory response" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035925 "mRNA 3'-UTR AU-rich region binding"
evidence=IEA] [GO:0032680 "regulation of tumor necrosis factor
production" evidence=IEA] [GO:0019957 "C-C chemokine binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0006950
"response to stress" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0005829 GO:GO:0005634
GO:GO:0006950 GO:GO:0050728 GO:GO:0008270 GO:GO:0003729
GO:GO:0007243 GO:GO:0017091 GO:GO:0000122 GO:GO:0010494
GO:GO:0060213 GO:GO:0000289 GO:GO:0045638 GO:GO:0070935
GeneTree:ENSGT00530000063262 GO:GO:0032680 GO:GO:0050779
OMA:RRLPIFN EMBL:AAEX03000957 Ensembl:ENSCAFT00000008910
Uniprot:E2RKS9
Length = 324
Score = 119 (46.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 24/41 (58%), Positives = 28/41 (68%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELR-STLFPTTKNK 148
KTELCR+ E G CR+G KCQFAHG ELR ++ P K K
Sbjct: 103 KTELCRTFSESGRCRYGAKCQFAHGLGELRQASRHPKYKTK 143
>ZFIN|ZDB-GENE-050913-48 [details] [associations]
symbol:zgc:114130 "zgc:114130" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
ZFIN:ZDB-GENE-050913-48 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00530000063262 EMBL:BX927244 IPI:IPI00610779
Ensembl:ENSDART00000124803 Ensembl:ENSDART00000139068
Uniprot:F1QH59
Length = 394
Score = 120 (47.3 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 25/42 (59%), Positives = 30/42 (71%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELRSTLFPTTKNKSE 150
KTELCR+ E G+C++G KCQFAHG EELR L K K+E
Sbjct: 142 KTELCRTFAERGLCKYGGKCQFAHGPEELRD-LNRHPKYKTE 182
>FB|FBgn0011837 [details] [associations]
symbol:Tis11 "Tis11 homolog" species:7227 "Drosophila
melanogaster" [GO:0003677 "DNA binding" evidence=NAS] [GO:0005634
"nucleus" evidence=NAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0010629 "negative regulation of gene expression" evidence=IDA]
[GO:0003730 "mRNA 3'-UTR binding" evidence=IDA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0005634
GO:GO:0016246 GO:GO:0046872 GO:GO:0003677 EMBL:AE014298
GO:GO:0008270 GO:GO:0003730 eggNOG:COG5063
GeneTree:ENSGT00530000063262 EMBL:U13397 EMBL:X81194
RefSeq:NP_511141.2 RefSeq:NP_727633.1 UniGene:Dm.4329
ProteinModelPortal:P47980 SMR:P47980 MINT:MINT-914241 STRING:P47980
PaxDb:P47980 EnsemblMetazoa:FBtr0073683 EnsemblMetazoa:FBtr0333756
GeneID:32222 KEGG:dme:Dmel_CG4070 CTD:32222 FlyBase:FBgn0011837
InParanoid:P47980 OMA:MNTSRYK OrthoDB:EOG47WM4T PhylomeDB:P47980
GenomeRNAi:32222 NextBio:777464 Bgee:P47980 Uniprot:P47980
Length = 436
Score = 120 (47.3 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 21/31 (67%), Positives = 24/31 (77%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELRS 139
KTELCR EE G C++G KCQFAHG ELR+
Sbjct: 137 KTELCRPFEEAGECKYGEKCQFAHGSHELRN 167
>RGD|620722 [details] [associations]
symbol:Zfp36 "zinc finger protein 36" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=ISO] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS;IDA] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0006402 "mRNA catabolic process"
evidence=ISO;ISS] [GO:0006950 "response to stress"
evidence=IEA;ISO;ISS] [GO:0007243 "intracellular protein kinase
cascade" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA;ISO;ISS] [GO:0017091 "AU-rich element binding"
evidence=ISO;ISS] [GO:0019901 "protein kinase binding"
evidence=IEA;ISO] [GO:0019957 "C-C chemokine binding"
evidence=IEA;ISO] [GO:0032680 "regulation of tumor necrosis factor
production" evidence=IEA;ISO;ISS] [GO:0035925 "mRNA 3'-UTR AU-rich
region binding" evidence=IEA;ISO] [GO:0043488 "regulation of mRNA
stability" evidence=ISO] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=IEA;ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0050728 "negative regulation of inflammatory response"
evidence=IEA;ISO] [GO:0050779 "RNA destabilization"
evidence=IEA;ISO] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening"
evidence=IEA;ISO;ISS] [GO:0070935 "3'-UTR-mediated mRNA
stabilization" evidence=IEA;ISO;ISS] [GO:0071889 "14-3-3 protein
binding" evidence=IEA;ISO;ISS] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 RGD:620722 GO:GO:0005829
GO:GO:0005634 GO:GO:0045893 GO:GO:0006950 GO:GO:0046872
GO:GO:0003677 GO:GO:0050728 GO:GO:0008270 GO:GO:0003729
GO:GO:0007243 GO:GO:0017091 GO:GO:0000122 GO:GO:0006402
GO:GO:0071889 GO:GO:0010494 GO:GO:0060213 eggNOG:COG5063
GO:GO:0000289 GO:GO:0045638 GO:GO:0070935 GO:GO:0032680
GO:GO:0050779 HOGENOM:HOG000233479 HOVERGEN:HBG008483 CTD:7538
KO:K15308 OMA:RRLPIFN OrthoDB:EOG4S4PH4 EMBL:X63369 EMBL:AB025017
EMBL:BC060308 IPI:IPI00192126 PIR:JC1255 RefSeq:NP_579824.2
UniGene:Rn.82737 ProteinModelPortal:P47973 SMR:P47973 STRING:P47973
PhosphoSite:P47973 PRIDE:P47973 GeneID:79426 KEGG:rno:79426
UCSC:RGD:620722 InParanoid:P47973 NextBio:614778
Genevestigator:P47973 GermOnline:ENSRNOG00000019673 Uniprot:P47973
Length = 320
Score = 117 (46.2 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 21/30 (70%), Positives = 23/30 (76%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELR 138
KTELCR+ E G CR+G KCQFAHG ELR
Sbjct: 98 KTELCRTYSESGRCRYGAKCQFAHGPGELR 127
>UNIPROTKB|P47973 [details] [associations]
symbol:Zfp36 "Tristetraprolin" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0007243 "intracellular
protein kinase cascade" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0019957 "C-C chemokine binding" evidence=IEA]
[GO:0035925 "mRNA 3'-UTR AU-rich region binding" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0050728 "negative regulation of inflammatory
response" evidence=IEA] [GO:0050779 "RNA destabilization"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 RGD:620722 GO:GO:0005829 GO:GO:0005634 GO:GO:0045893
GO:GO:0006950 GO:GO:0046872 GO:GO:0003677 GO:GO:0050728
GO:GO:0008270 GO:GO:0003729 GO:GO:0007243 GO:GO:0017091
GO:GO:0000122 GO:GO:0006402 GO:GO:0071889 GO:GO:0010494
GO:GO:0060213 eggNOG:COG5063 GO:GO:0000289 GO:GO:0045638
GO:GO:0070935 GO:GO:0032680 GO:GO:0050779 HOGENOM:HOG000233479
HOVERGEN:HBG008483 CTD:7538 KO:K15308 OMA:RRLPIFN OrthoDB:EOG4S4PH4
EMBL:X63369 EMBL:AB025017 EMBL:BC060308 IPI:IPI00192126 PIR:JC1255
RefSeq:NP_579824.2 UniGene:Rn.82737 ProteinModelPortal:P47973
SMR:P47973 STRING:P47973 PhosphoSite:P47973 PRIDE:P47973
GeneID:79426 KEGG:rno:79426 UCSC:RGD:620722 InParanoid:P47973
NextBio:614778 Genevestigator:P47973 GermOnline:ENSRNOG00000019673
Uniprot:P47973
Length = 320
Score = 117 (46.2 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 21/30 (70%), Positives = 23/30 (76%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELR 138
KTELCR+ E G CR+G KCQFAHG ELR
Sbjct: 98 KTELCRTYSESGRCRYGAKCQFAHGPGELR 127
>ZFIN|ZDB-GENE-030131-5873 [details] [associations]
symbol:zfp36l2 "zinc finger protein 36, C3H
type-like 2" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
ZFIN:ZDB-GENE-030131-5873 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00530000063262 InterPro:IPR007635 Pfam:PF04553
EMBL:CR932077 IPI:IPI00508201 Ensembl:ENSDART00000142674
ArrayExpress:F1QU82 Bgee:F1QU82 Uniprot:F1QU82
Length = 373
Score = 118 (46.6 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 25/42 (59%), Positives = 29/42 (69%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELRSTLFPTTKNKSE 150
KTELCR EE G C++G KCQFAHG ELR+ L K K+E
Sbjct: 119 KTELCRPFEENGSCKYGEKCQFAHGYHELRN-LSRHPKYKTE 159
>MGI|MGI:99180 [details] [associations]
symbol:Zfp36 "zinc finger protein 36" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO;IMP] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IDA] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003729 "mRNA binding" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO;IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IGI] [GO:0006402 "mRNA catabolic process"
evidence=ISO] [GO:0006950 "response to stress" evidence=ISO]
[GO:0007243 "intracellular protein kinase cascade" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=ISO] [GO:0017091 "AU-rich
element binding" evidence=ISO;IDA] [GO:0019901 "protein kinase
binding" evidence=ISO] [GO:0019957 "C-C chemokine binding"
evidence=ISO] [GO:0032680 "regulation of tumor necrosis factor
production" evidence=ISO] [GO:0035925 "mRNA 3'-UTR AU-rich region
binding" evidence=IDA] [GO:0043488 "regulation of mRNA stability"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050728 "negative regulation of inflammatory
response" evidence=IMP] [GO:0050779 "RNA destabilization"
evidence=IMP] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening" evidence=ISO]
[GO:0070935 "3'-UTR-mediated mRNA stabilization" evidence=ISO]
[GO:0071889 "14-3-3 protein binding" evidence=ISO]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
MGI:MGI:99180 GO:GO:0005829 GO:GO:0005634 GO:GO:0006950
GO:GO:0046872 GO:GO:0003677 GO:GO:0050728 GO:GO:0008270
GO:GO:0007243 GO:GO:0000122 GO:GO:0071889 GO:GO:0010494
GO:GO:0060213 eggNOG:COG5063 GO:GO:0000289 GO:GO:0045638
GO:GO:0070935 GO:GO:0032680 GO:GO:0035925 GO:GO:0050779
HOGENOM:HOG000233479 HOVERGEN:HBG008483 CTD:7538 KO:K15308
OMA:RRLPIFN OrthoDB:EOG4S4PH4 EMBL:M57422 EMBL:M58691 EMBL:X14678
EMBL:M58565 EMBL:L42317 EMBL:BC021391 IPI:IPI00132695 PIR:A36600
PIR:S04743 RefSeq:NP_035886.1 UniGene:Mm.389856 PDB:1M9O
PDBsum:1M9O ProteinModelPortal:P22893 SMR:P22893 IntAct:P22893
MINT:MINT-225240 STRING:P22893 PhosphoSite:P22893 PRIDE:P22893
Ensembl:ENSMUST00000051241 GeneID:22695 KEGG:mmu:22695
InParanoid:P22893 EvolutionaryTrace:P22893 NextBio:303151
Bgee:P22893 CleanEx:MM_ZFP36 Genevestigator:P22893
GermOnline:ENSMUSG00000044786 Uniprot:P22893
Length = 319
Score = 116 (45.9 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 21/30 (70%), Positives = 23/30 (76%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELR 138
KTELCR+ E G CR+G KCQFAHG ELR
Sbjct: 97 KTELCRTYSESGRCRYGAKCQFAHGLGELR 126
>UNIPROTKB|G3MWV8 [details] [associations]
symbol:ZFP36 "Tristetraprolin" species:9913 "Bos taurus"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00530000063262 EMBL:DAAA02047057 EMBL:DAAA02047055
EMBL:DAAA02047056 Ensembl:ENSBTAT00000011308 Uniprot:G3MWV8
Length = 324
Score = 116 (45.9 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 25/44 (56%), Positives = 31/44 (70%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELR-STLFPTTKNKSEV 151
KTELCR+ E G CR+G KCQFAHG ELR ++ P K K+E+
Sbjct: 103 KTELCRTFSESGRCRYGAKCQFAHGLGELRQASRHP--KYKTEL 144
>UNIPROTKB|P53781 [details] [associations]
symbol:ZFP36 "Tristetraprolin" species:9913 "Bos taurus"
[GO:0070935 "3'-UTR-mediated mRNA stabilization" evidence=ISS]
[GO:0010494 "cytoplasmic stress granule" evidence=ISS] [GO:0071889
"14-3-3 protein binding" evidence=ISS] [GO:0032680 "regulation of
tumor necrosis factor production" evidence=ISS] [GO:0006950
"response to stress" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0060213
"positive regulation of nuclear-transcribed mRNA poly(A) tail
shortening" evidence=ISS] [GO:0006402 "mRNA catabolic process"
evidence=ISS] [GO:0017091 "AU-rich element binding" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0005634 GO:GO:0006950
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0017091
GO:GO:0006402 GO:GO:0071889 GO:GO:0010494 GO:GO:0060213
GO:GO:0070935 GO:GO:0032680 HOVERGEN:HBG008483 EMBL:L42319
IPI:IPI00698292 RefSeq:NP_776918.1 UniGene:Bt.3863
ProteinModelPortal:P53781 SMR:P53781 PRIDE:P53781 GeneID:282127
KEGG:bta:282127 CTD:7538 KO:K15308 NextBio:20805964 Uniprot:P53781
Length = 324
Score = 116 (45.9 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 25/44 (56%), Positives = 31/44 (70%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELR-STLFPTTKNKSEV 151
KTELCR+ E G CR+G KCQFAHG ELR ++ P K K+E+
Sbjct: 103 KTELCRTFSESGRCRYGAKCQFAHGLGELRQASRHP--KYKTEL 144
>UNIPROTKB|Q0VCR3 [details] [associations]
symbol:ZFP36 "Tristetraprolin" species:9913 "Bos taurus"
[GO:0071889 "14-3-3 protein binding" evidence=IEA] [GO:0070935
"3'-UTR-mediated mRNA stabilization" evidence=IEA] [GO:0060213
"positive regulation of nuclear-transcribed mRNA poly(A) tail
shortening" evidence=IEA] [GO:0050779 "RNA destabilization"
evidence=IEA] [GO:0050728 "negative regulation of inflammatory
response" evidence=IEA] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=IEA] [GO:0035925 "mRNA 3'-UTR
AU-rich region binding" evidence=IEA] [GO:0032680 "regulation of
tumor necrosis factor production" evidence=IEA] [GO:0019957 "C-C
chemokine binding" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0007243 "intracellular protein kinase cascade"
evidence=IEA] [GO:0006950 "response to stress" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA poly(A) tail
shortening" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0005829
GO:GO:0005634 GO:GO:0006950 GO:GO:0050728 GO:GO:0008270
GO:GO:0003729 GO:GO:0007243 GO:GO:0017091 GO:GO:0000122
GO:GO:0010494 GO:GO:0060213 GO:GO:0000289 GO:GO:0045638
GO:GO:0070935 GeneTree:ENSGT00530000063262 GO:GO:0032680
GO:GO:0050779 HOVERGEN:HBG008483 IPI:IPI00698292 UniGene:Bt.3863
OMA:RRLPIFN EMBL:DAAA02047057 EMBL:DAAA02047055 EMBL:DAAA02047056
EMBL:BC120043 SMR:Q0VCR3 Ensembl:ENSBTAT00000066266 Uniprot:Q0VCR3
Length = 325
Score = 116 (45.9 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 25/44 (56%), Positives = 31/44 (70%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELR-STLFPTTKNKSEV 151
KTELCR+ E G CR+G KCQFAHG ELR ++ P K K+E+
Sbjct: 103 KTELCRTFSESGRCRYGAKCQFAHGLGELRQASRHP--KYKTEL 144
>UNIPROTKB|D0VE66 [details] [associations]
symbol:LOC100623625 "Tristetraprolin" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 eggNOG:COG5063 GeneTree:ENSGT00530000063262 CTD:7538
KO:K15308 OMA:RRLPIFN OrthoDB:EOG4S4PH4 EMBL:FP102918 EMBL:FP236263
EMBL:GU066778 EMBL:HM484335 EMBL:HM480487 RefSeq:NP_001161891.1
RefSeq:XP_003355955.1 UniGene:Ssc.28024 STRING:D0VE66
Ensembl:ENSSSCT00000011714 Ensembl:ENSSSCT00000026750
GeneID:100316849 GeneID:100623625 KEGG:ssc:100316849
KEGG:ssc:100623625 Uniprot:D0VE66
Length = 326
Score = 116 (45.9 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 25/44 (56%), Positives = 31/44 (70%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELR-STLFPTTKNKSEV 151
KTELCR+ E G CR+G KCQFAHG ELR ++ P K K+E+
Sbjct: 104 KTELCRTFSESGRCRYGAKCQFAHGLGELRQASRHP--KYKTEL 145
>UNIPROTKB|Q6S9E0 [details] [associations]
symbol:ZFP36 "Tristetraprolin" species:9940 "Ovis aries"
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0006402 "mRNA catabolic process" evidence=ISS]
[GO:0006950 "response to stress" evidence=ISS] [GO:0010494
"cytoplasmic stress granule" evidence=ISS] [GO:0017091 "AU-rich
element binding" evidence=ISS] [GO:0032680 "regulation of tumor
necrosis factor production" evidence=ISS] [GO:0060213 "positive
regulation of nuclear-transcribed mRNA poly(A) tail shortening"
evidence=ISS] [GO:0070935 "3'-UTR-mediated mRNA stabilization"
evidence=ISS] [GO:0071889 "14-3-3 protein binding" evidence=ISS]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005634 GO:GO:0006950 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0017091 GO:GO:0006402 GO:GO:0071889
GO:GO:0010494 GO:GO:0060213 GO:GO:0070935 GO:GO:0032680
HOVERGEN:HBG008483 CTD:7538 EMBL:AY462109 RefSeq:NP_001009765.1
UniGene:Oar.1075 ProteinModelPortal:Q6S9E0 SMR:Q6S9E0 GeneID:443283
Uniprot:Q6S9E0
Length = 325
Score = 115 (45.5 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 21/30 (70%), Positives = 23/30 (76%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELR 138
KTELCR+ E G CR+G KCQFAHG ELR
Sbjct: 103 KTELCRTFSESGRCRYGAKCQFAHGLGELR 132
>UNIPROTKB|P26651 [details] [associations]
symbol:ZFP36 "Tristetraprolin" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA] [GO:0007243 "intracellular
protein kinase cascade" evidence=IEA] [GO:0035925 "mRNA 3'-UTR
AU-rich region binding" evidence=IEA] [GO:0045638 "negative
regulation of myeloid cell differentiation" evidence=IEA]
[GO:0050728 "negative regulation of inflammatory response"
evidence=IEA] [GO:0050779 "RNA destabilization" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=IMP;IDA] [GO:0006402
"mRNA catabolic process" evidence=IDA] [GO:0060213 "positive
regulation of nuclear-transcribed mRNA poly(A) tail shortening"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0019957 "C-C chemokine binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019901 "protein kinase binding"
evidence=IPI] [GO:0006950 "response to stress" evidence=IDA]
[GO:0010494 "cytoplasmic stress granule" evidence=IDA] [GO:0071889
"14-3-3 protein binding" evidence=IDA] [GO:0032680 "regulation of
tumor necrosis factor production" evidence=IDA] [GO:0070935
"3'-UTR-mediated mRNA stabilization" evidence=IDA] [GO:1900153
"positive regulation of nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=ISS] [GO:0035278 "negative
regulation of translation involved in gene silencing by miRNA"
evidence=ISS] [GO:0003727 "single-stranded RNA binding"
evidence=TAS] [GO:0003729 "mRNA binding" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA;TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0005829
GO:GO:0005634 GO:GO:0010467 GO:GO:0006950 GO:GO:0046872
GO:GO:0003677 GO:GO:0050728 GO:GO:0008270 GO:GO:0003729
GO:GO:0003727 GO:GO:0007243 GO:GO:0017091 GO:GO:0000122
GO:GO:0006402 GO:GO:0071889 GO:GO:0010494 GO:GO:0060213
eggNOG:COG5063 GO:GO:0000289 GO:GO:0045638 GO:GO:0070935
GO:GO:0032680 GO:GO:0050779 HOGENOM:HOG000233479 HOVERGEN:HBG008483
CTD:7538 KO:K15308 EMBL:M92843 EMBL:M92844 EMBL:M63625
EMBL:AK314042 EMBL:AY771351 EMBL:BC009693 IPI:IPI00000893
PIR:S34427 RefSeq:NP_003398.2 UniGene:Hs.534052
ProteinModelPortal:P26651 SMR:P26651 DIP:DIP-29845N IntAct:P26651
MINT:MINT-1171915 STRING:P26651 PhosphoSite:P26651 DMDM:136471
PRIDE:P26651 DNASU:7538 Ensembl:ENST00000248673 GeneID:7538
KEGG:hsa:7538 UCSC:uc002olh.1 GeneCards:GC19P039897 HGNC:HGNC:12862
HPA:HPA006009 MIM:190700 neXtProt:NX_P26651 PharmGKB:PA37451
InParanoid:P26651 OMA:RRLPIFN OrthoDB:EOG4S4PH4 PhylomeDB:P26651
ChiTaRS:ZFP36 GenomeRNAi:7538 NextBio:29497 Bgee:P26651
CleanEx:HS_ZFP36 Genevestigator:P26651 GermOnline:ENSG00000128016
Uniprot:P26651
Length = 326
Score = 115 (45.5 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 21/30 (70%), Positives = 23/30 (76%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELR 138
KTELCR+ E G CR+G KCQFAHG ELR
Sbjct: 105 KTELCRTFSESGRCRYGAKCQFAHGLGELR 134
>POMBASE|SPBC1718.07c [details] [associations]
symbol:zfs1 "CCCH tandem zinc finger protein, human
Tristetraprolin homolog Zfs1, involved in mRNA catabolism"
species:4896 "Schizosaccharomyces pombe" [GO:0000750
"pheromone-dependent signal transduction involved in conjugation
with cellular fusion" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006402 "mRNA catabolic process"
evidence=IMP] [GO:0007093 "mitotic cell cycle checkpoint"
evidence=IMP] [GO:0007094 "mitotic spindle assembly checkpoint"
evidence=IGI] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010972 "negative regulation of G2/M transition of mitotic cell
cycle" evidence=IMP] [GO:0031030 "negative regulation of septation
initiation signaling cascade" evidence=IGI] [GO:0031137 "regulation
of conjugation with cellular fusion" evidence=IGI] [GO:0035925
"mRNA 3'-UTR AU-rich region binding" evidence=IDA] [GO:0045839
"negative regulation of mitosis" evidence=IMP] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 PomBase:SPBC1718.07c
GO:GO:0005829 GO:GO:0005634 GO:GO:0051301 GO:GO:0007094
GO:GO:0031030 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GenomeReviews:CU329671_GR GO:GO:0000750 GO:GO:0006402 GO:GO:0031137
eggNOG:COG5063 GO:GO:0010972 OrthoDB:EOG4W3WXK GO:GO:0035925
EMBL:D49913 PIR:T50335 RefSeq:NP_596453.1 ProteinModelPortal:P47979
SMR:P47979 MINT:MINT-4690404 STRING:P47979
EnsemblFungi:SPBC1718.07c.1 GeneID:2539958 KEGG:spo:SPBC1718.07c
NextBio:20801101 Uniprot:P47979
Length = 404
Score = 104 (41.7 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 22/43 (51%), Positives = 29/43 (67%)
Query: 109 KTELCRSREEVGMCRFGTKCQFAHGKEELRSTLFPT-TKNKSE 150
KTE C++ + G CR+G+KCQFAHG +EL+ P K KSE
Sbjct: 328 KTEPCKNWQISGTCRYGSKCQFAHGNQELKEP--PRHPKYKSE 368
Score = 43 (20.2 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 10/16 (62%), Positives = 12/16 (75%)
Query: 11 SKMGKQKSPNGNVSPL 26
S + KQ SP+GN SPL
Sbjct: 268 SNLSKQFSPSGN-SPL 282
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.128 0.381 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 241 191 0.00094 110 3 11 23 0.49 32
31 0.43 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 39
No. of states in DFA: 603 (64 KB)
Total size of DFA: 165 KB (2097 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.69u 0.08s 17.77t Elapsed: 00:00:01
Total cpu time: 17.69u 0.08s 17.77t Elapsed: 00:00:03
Start: Thu May 9 23:01:04 2013 End: Thu May 9 23:01:07 2013