Query 042242
Match_columns 303
No_of_seqs 139 out of 2112
Neff 10.1
Searched_HMMs 46136
Date Fri Mar 29 04:18:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042242.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042242hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1087 GalE UDP-glucose 4-epi 100.0 1.2E-33 2.5E-38 230.9 21.2 257 29-301 1-276 (329)
2 PRK15181 Vi polysaccharide bio 100.0 3.8E-32 8.3E-37 239.3 24.3 253 24-298 11-284 (348)
3 COG1088 RfbB dTDP-D-glucose 4, 100.0 9.5E-31 2.1E-35 212.8 21.2 251 29-301 1-267 (340)
4 PF01073 3Beta_HSD: 3-beta hyd 100.0 2.2E-30 4.9E-35 220.0 23.4 251 32-301 1-273 (280)
5 PLN02427 UDP-apiose/xylose syn 100.0 1.9E-29 4.2E-34 225.3 24.8 260 27-298 13-308 (386)
6 PRK11908 NAD-dependent epimera 100.0 2.2E-29 4.8E-34 221.9 23.4 254 29-299 2-274 (347)
7 TIGR01472 gmd GDP-mannose 4,6- 100.0 7.5E-29 1.6E-33 218.2 24.7 247 29-299 1-272 (343)
8 PRK10217 dTDP-glucose 4,6-dehy 100.0 9E-29 1.9E-33 218.8 24.9 249 29-299 2-273 (355)
9 PRK08125 bifunctional UDP-gluc 100.0 1.3E-28 2.8E-33 233.1 24.3 257 27-299 314-588 (660)
10 PLN02572 UDP-sulfoquinovose sy 100.0 5.2E-28 1.1E-32 218.3 25.0 259 27-300 46-364 (442)
11 PLN02695 GDP-D-mannose-3',5'-e 100.0 6.6E-28 1.4E-32 213.6 24.8 255 27-301 20-286 (370)
12 PLN02166 dTDP-glucose 4,6-dehy 100.0 2.4E-28 5.2E-33 219.5 22.2 241 28-300 120-378 (436)
13 PLN02260 probable rhamnose bio 100.0 8.9E-28 1.9E-32 228.4 24.6 253 27-300 5-273 (668)
14 PRK09987 dTDP-4-dehydrorhamnos 100.0 5.8E-28 1.3E-32 208.3 20.1 230 29-296 1-234 (299)
15 PLN02206 UDP-glucuronate decar 100.0 1.4E-27 3.1E-32 215.0 23.3 244 28-300 119-377 (442)
16 PLN02653 GDP-mannose 4,6-dehyd 100.0 4.2E-27 9.1E-32 206.9 25.5 249 27-299 5-278 (340)
17 COG0451 WcaG Nucleoside-diphos 100.0 3.6E-27 7.7E-32 205.0 24.2 249 30-301 2-261 (314)
18 KOG1502 Flavonol reductase/cin 100.0 3.1E-27 6.7E-32 198.4 22.4 250 27-297 5-272 (327)
19 TIGR01214 rmlD dTDP-4-dehydror 100.0 2.9E-27 6.2E-32 203.1 22.1 228 30-300 1-232 (287)
20 TIGR02622 CDP_4_6_dhtase CDP-g 100.0 6.5E-27 1.4E-31 206.3 24.6 250 27-297 3-277 (349)
21 PLN02240 UDP-glucose 4-epimera 100.0 1.1E-26 2.4E-31 205.2 25.5 263 25-301 2-294 (352)
22 PRK10084 dTDP-glucose 4,6 dehy 100.0 5.1E-27 1.1E-31 207.3 23.0 255 29-300 1-281 (352)
23 TIGR01181 dTDP_gluc_dehyt dTDP 100.0 6.2E-27 1.3E-31 203.7 23.2 247 30-300 1-264 (317)
24 PLN02214 cinnamoyl-CoA reducta 100.0 5.5E-27 1.2E-31 205.9 22.8 243 27-297 9-269 (342)
25 PRK11150 rfaD ADP-L-glycero-D- 100.0 6.4E-27 1.4E-31 203.0 20.1 239 31-298 2-256 (308)
26 PF01370 Epimerase: NAD depend 100.0 5.9E-27 1.3E-31 195.3 19.0 223 31-278 1-236 (236)
27 PLN02989 cinnamyl-alcohol dehy 100.0 4.1E-26 8.9E-31 199.4 24.6 250 27-297 4-271 (325)
28 PLN02662 cinnamyl-alcohol dehy 100.0 3E-26 6.5E-31 200.0 23.6 247 28-298 4-270 (322)
29 PRK10675 UDP-galactose-4-epime 100.0 6.2E-26 1.3E-30 199.4 24.8 258 29-301 1-285 (338)
30 PLN00198 anthocyanidin reducta 99.9 9.5E-26 2.1E-30 198.1 25.2 257 23-298 4-285 (338)
31 TIGR03466 HpnA hopanoid-associ 99.9 1.9E-25 4.1E-30 195.4 26.1 245 29-301 1-252 (328)
32 PLN02986 cinnamyl-alcohol dehy 99.9 1.1E-25 2.5E-30 196.3 24.6 246 28-297 5-270 (322)
33 COG1091 RfbD dTDP-4-dehydrorha 99.9 4.2E-26 9E-31 188.9 20.3 225 30-300 2-230 (281)
34 PLN02650 dihydroflavonol-4-red 99.9 1.1E-25 2.3E-30 198.7 23.9 247 27-297 4-272 (351)
35 CHL00194 ycf39 Ycf39; Provisio 99.9 3.3E-26 7.2E-31 199.1 19.2 223 29-301 1-226 (317)
36 PF04321 RmlD_sub_bind: RmlD s 99.9 1.2E-26 2.6E-31 198.3 14.8 230 29-300 1-235 (286)
37 PLN02725 GDP-4-keto-6-deoxyman 99.9 1.2E-25 2.6E-30 194.8 21.2 238 32-300 1-253 (306)
38 KOG1371 UDP-glucose 4-epimeras 99.9 5.5E-26 1.2E-30 187.8 17.5 254 27-301 1-288 (343)
39 TIGR02197 heptose_epim ADP-L-g 99.9 2.5E-25 5.5E-30 193.4 22.3 246 31-300 1-263 (314)
40 PLN02686 cinnamoyl-CoA reducta 99.9 2E-25 4.4E-30 197.5 21.5 258 23-301 48-328 (367)
41 KOG1429 dTDP-glucose 4-6-dehyd 99.9 6.5E-26 1.4E-30 183.2 16.1 245 25-297 24-282 (350)
42 PLN02896 cinnamyl-alcohol dehy 99.9 4.5E-25 9.7E-30 194.9 21.8 258 27-298 9-293 (353)
43 COG1090 Predicted nucleoside-d 99.9 2.4E-25 5.2E-30 180.2 18.1 237 31-301 1-244 (297)
44 TIGR01179 galE UDP-glucose-4-e 99.9 1.9E-24 4E-29 189.0 23.4 257 30-301 1-280 (328)
45 PRK07201 short chain dehydroge 99.9 1.2E-24 2.6E-29 207.4 23.7 250 29-300 1-271 (657)
46 PLN02583 cinnamoyl-CoA reducta 99.9 1.8E-24 3.8E-29 186.5 22.4 240 28-297 6-264 (297)
47 PLN02996 fatty acyl-CoA reduct 99.9 2E-24 4.4E-29 197.0 24.0 261 27-300 10-361 (491)
48 PLN00016 RNA-binding protein; 99.9 1.5E-24 3.3E-29 193.0 20.7 229 25-300 49-295 (378)
49 KOG1430 C-3 sterol dehydrogena 99.9 2.9E-24 6.3E-29 184.0 20.2 253 28-301 4-272 (361)
50 KOG0747 Putative NAD+-dependen 99.9 3.3E-24 7.1E-29 173.4 17.3 250 29-301 7-272 (331)
51 TIGR01777 yfcH conserved hypot 99.9 8.1E-24 1.8E-28 182.1 21.2 238 31-300 1-245 (292)
52 PLN02657 3,8-divinyl protochlo 99.9 1.1E-23 2.3E-28 187.6 21.0 225 27-301 59-301 (390)
53 TIGR03589 PseB UDP-N-acetylglu 99.9 6E-23 1.3E-27 179.0 22.6 228 27-298 3-246 (324)
54 PLN02778 3,5-epimerase/4-reduc 99.9 7.9E-23 1.7E-27 176.0 21.8 225 27-299 8-240 (298)
55 COG1089 Gmd GDP-D-mannose dehy 99.9 1E-22 2.2E-27 164.9 19.8 250 27-299 1-271 (345)
56 TIGR01746 Thioester-redct thio 99.9 2.8E-21 6E-26 171.5 24.2 249 30-301 1-283 (367)
57 PF02719 Polysacc_synt_2: Poly 99.9 4.3E-22 9.4E-27 166.0 13.9 225 31-299 1-250 (293)
58 COG1086 Predicted nucleoside-d 99.9 5.4E-21 1.2E-25 169.4 21.0 231 27-301 249-500 (588)
59 PLN02503 fatty acyl-CoA reduct 99.9 6.8E-21 1.5E-25 175.4 21.3 256 27-298 118-474 (605)
60 PRK05865 hypothetical protein; 99.9 3.3E-21 7.1E-26 182.9 19.0 201 29-295 1-201 (854)
61 TIGR03649 ergot_EASG ergot alk 99.9 7.2E-21 1.6E-25 163.2 18.4 211 30-301 1-218 (285)
62 KOG2865 NADH:ubiquinone oxidor 99.9 1.3E-20 2.9E-25 152.6 15.7 233 19-297 52-294 (391)
63 PRK12320 hypothetical protein; 99.9 7.4E-20 1.6E-24 170.4 21.1 202 29-295 1-202 (699)
64 PLN02260 probable rhamnose bio 99.8 6.7E-20 1.4E-24 174.6 20.0 224 27-297 379-609 (668)
65 KOG1431 GDP-L-fucose synthetas 99.8 2.7E-19 5.8E-24 140.4 15.5 241 28-301 1-262 (315)
66 PF13460 NAD_binding_10: NADH( 99.8 5.5E-19 1.2E-23 141.6 15.4 181 31-264 1-183 (183)
67 PRK06482 short chain dehydroge 99.8 5.1E-18 1.1E-22 144.9 20.7 230 27-297 1-263 (276)
68 PF07993 NAD_binding_4: Male s 99.8 5.4E-19 1.2E-23 148.5 13.3 211 33-258 1-249 (249)
69 PRK09135 pteridine reductase; 99.8 9.2E-18 2E-22 141.0 20.6 214 27-284 5-248 (249)
70 PF05368 NmrA: NmrA-like famil 99.8 2.2E-19 4.7E-24 149.5 10.3 224 31-300 1-229 (233)
71 PLN00141 Tic62-NAD(P)-related 99.8 1E-17 2.2E-22 141.0 18.9 224 28-294 17-250 (251)
72 TIGR03443 alpha_am_amid L-amin 99.8 3.5E-17 7.6E-22 168.1 25.3 259 28-301 971-1267(1389)
73 COG3320 Putative dehydrogenase 99.8 4.3E-17 9.3E-22 138.6 20.7 170 29-208 1-202 (382)
74 PRK08263 short chain dehydroge 99.8 1.8E-17 4E-22 141.4 18.0 234 27-297 2-263 (275)
75 PLN03209 translocon at the inn 99.8 3.8E-17 8.3E-22 148.2 19.1 224 27-293 79-321 (576)
76 PRK12825 fabG 3-ketoacyl-(acyl 99.8 8.9E-17 1.9E-21 134.8 20.0 214 26-283 4-248 (249)
77 PRK05875 short chain dehydroge 99.8 3.7E-16 8E-21 133.4 21.9 233 26-299 5-273 (276)
78 PRK12826 3-ketoacyl-(acyl-carr 99.7 2.2E-16 4.8E-21 132.7 18.3 214 26-281 4-247 (251)
79 PRK07074 short chain dehydroge 99.7 5.2E-16 1.1E-20 131.1 18.6 226 27-294 1-254 (257)
80 PRK07806 short chain dehydroge 99.7 2.1E-16 4.4E-21 132.8 15.7 217 26-283 4-245 (248)
81 PRK13394 3-hydroxybutyrate deh 99.7 2E-16 4.2E-21 134.0 15.2 222 26-282 5-260 (262)
82 PRK07067 sorbitol dehydrogenas 99.7 6.1E-16 1.3E-20 130.7 15.8 226 27-284 5-257 (257)
83 PRK07774 short chain dehydroge 99.7 3.9E-15 8.3E-20 125.2 20.3 213 27-284 5-249 (250)
84 TIGR01963 PHB_DH 3-hydroxybuty 99.7 5.9E-16 1.3E-20 130.5 15.2 215 29-282 2-253 (255)
85 PRK05653 fabG 3-ketoacyl-(acyl 99.7 2E-15 4.4E-20 126.4 18.4 213 26-281 3-244 (246)
86 PRK12828 short chain dehydroge 99.7 2.6E-15 5.7E-20 125.2 18.9 205 27-282 6-237 (239)
87 KOG1372 GDP-mannose 4,6 dehydr 99.7 1.5E-15 3.3E-20 121.0 16.3 245 28-297 28-298 (376)
88 PRK06914 short chain dehydroge 99.7 3.3E-15 7.2E-20 127.8 19.8 220 27-286 2-260 (280)
89 PRK12384 sorbitol-6-phosphate 99.7 7E-16 1.5E-20 130.5 15.4 222 27-282 1-257 (259)
90 PRK12429 3-hydroxybutyrate deh 99.7 1E-15 2.3E-20 129.2 16.3 217 27-281 3-255 (258)
91 PRK06128 oxidoreductase; Provi 99.7 6.6E-15 1.4E-19 127.2 21.3 216 27-283 54-299 (300)
92 PRK12829 short chain dehydroge 99.7 3E-15 6.6E-20 126.8 18.6 223 26-282 9-262 (264)
93 PRK12745 3-ketoacyl-(acyl-carr 99.7 6.4E-15 1.4E-19 124.3 20.3 213 27-282 1-252 (256)
94 PRK06180 short chain dehydroge 99.7 8E-15 1.7E-19 125.3 21.0 157 27-206 3-186 (277)
95 PRK09186 flagellin modificatio 99.7 4E-15 8.7E-20 125.5 19.0 217 27-280 3-253 (256)
96 PRK12746 short chain dehydroge 99.7 3.8E-15 8.3E-20 125.5 18.6 213 27-280 5-251 (254)
97 PRK07523 gluconate 5-dehydroge 99.7 3E-15 6.5E-20 126.3 17.9 217 26-284 8-254 (255)
98 PRK09134 short chain dehydroge 99.7 7.7E-15 1.7E-19 124.0 20.2 212 26-286 7-249 (258)
99 TIGR03206 benzo_BadH 2-hydroxy 99.7 9.6E-15 2.1E-19 122.8 19.8 216 27-281 2-248 (250)
100 PRK12823 benD 1,6-dihydroxycyc 99.7 1.4E-14 3.1E-19 122.5 20.6 218 26-281 6-258 (260)
101 KOG1221 Acyl-CoA reductase [Li 99.7 2.9E-15 6.2E-20 132.3 16.6 255 27-297 11-332 (467)
102 PRK07231 fabG 3-ketoacyl-(acyl 99.7 6.2E-15 1.3E-19 123.9 17.4 216 27-282 4-249 (251)
103 PRK06077 fabG 3-ketoacyl-(acyl 99.7 8.7E-15 1.9E-19 123.1 17.3 213 28-282 6-246 (252)
104 COG0702 Predicted nucleoside-d 99.7 3.1E-14 6.8E-19 121.3 20.8 220 29-301 1-223 (275)
105 PRK05717 oxidoreductase; Valid 99.7 1.1E-14 2.4E-19 122.9 17.6 216 24-282 6-248 (255)
106 PRK07890 short chain dehydroge 99.6 6.8E-15 1.5E-19 124.3 16.3 217 27-281 4-255 (258)
107 PRK07060 short chain dehydroge 99.6 2.5E-14 5.4E-19 119.9 19.5 215 26-281 7-242 (245)
108 PRK06179 short chain dehydroge 99.6 3.2E-14 6.8E-19 121.1 20.3 156 28-207 4-182 (270)
109 PRK07577 short chain dehydroge 99.6 2.7E-14 6E-19 118.8 19.6 209 27-281 2-232 (234)
110 PRK07775 short chain dehydroge 99.6 2.2E-14 4.7E-19 122.4 18.9 210 28-278 10-249 (274)
111 PRK08063 enoyl-(acyl carrier p 99.6 2.9E-14 6.3E-19 119.9 19.3 214 27-282 3-247 (250)
112 PRK12935 acetoacetyl-CoA reduc 99.6 4E-14 8.7E-19 118.8 20.0 210 27-281 5-245 (247)
113 PRK06182 short chain dehydroge 99.6 2.3E-14 5E-19 122.1 18.5 158 27-206 2-182 (273)
114 PRK06523 short chain dehydroge 99.6 8.3E-14 1.8E-18 117.8 21.6 221 26-284 7-259 (260)
115 PRK06138 short chain dehydroge 99.6 4.6E-14 1E-18 118.8 19.9 216 27-280 4-248 (252)
116 PRK08220 2,3-dihydroxybenzoate 99.6 6.7E-14 1.5E-18 117.8 20.8 220 26-281 6-248 (252)
117 PLN02253 xanthoxin dehydrogena 99.6 5.7E-14 1.2E-18 120.2 20.5 226 26-287 16-275 (280)
118 PRK06123 short chain dehydroge 99.6 5.1E-14 1.1E-18 118.2 19.7 212 27-280 1-247 (248)
119 PRK05557 fabG 3-ketoacyl-(acyl 99.6 7.2E-14 1.6E-18 117.1 20.6 211 27-281 4-245 (248)
120 PRK12827 short chain dehydroge 99.6 4.6E-14 1E-18 118.5 19.4 211 26-281 4-248 (249)
121 PRK07856 short chain dehydroge 99.6 7.8E-14 1.7E-18 117.5 20.4 216 26-284 4-242 (252)
122 PRK05876 short chain dehydroge 99.6 5.1E-14 1.1E-18 120.1 19.2 206 26-265 4-240 (275)
123 PRK07985 oxidoreductase; Provi 99.6 1.4E-13 3.1E-18 118.5 21.1 214 26-281 47-291 (294)
124 PRK08219 short chain dehydroge 99.6 4.3E-14 9.2E-19 117.0 17.0 202 27-279 2-222 (227)
125 PRK10538 malonic semialdehyde 99.6 1.4E-13 3E-18 115.7 19.9 156 29-206 1-183 (248)
126 PRK06701 short chain dehydroge 99.6 3E-13 6.4E-18 116.3 22.3 215 25-282 43-287 (290)
127 COG2910 Putative NADH-flavin r 99.6 8.3E-14 1.8E-18 106.4 16.1 203 29-277 1-209 (211)
128 PRK06500 short chain dehydroge 99.6 1.5E-13 3.2E-18 115.4 19.6 157 27-206 5-186 (249)
129 PRK06194 hypothetical protein; 99.6 1.4E-13 3.1E-18 118.2 19.6 105 27-132 5-127 (287)
130 PRK08628 short chain dehydroge 99.6 1.5E-13 3.1E-18 116.2 19.3 224 26-287 5-255 (258)
131 PRK06841 short chain dehydroge 99.6 2.3E-13 5.1E-18 114.7 20.4 213 27-282 14-253 (255)
132 PRK12939 short chain dehydroge 99.6 1.9E-13 4.1E-18 114.8 19.5 213 27-281 6-247 (250)
133 PRK05565 fabG 3-ketoacyl-(acyl 99.6 9E-14 2E-18 116.5 17.5 212 26-281 3-245 (247)
134 PRK06398 aldose dehydrogenase; 99.6 2.9E-13 6.3E-18 114.4 20.6 217 26-281 4-244 (258)
135 COG4221 Short-chain alcohol de 99.6 1.8E-13 3.8E-18 110.3 17.9 195 27-267 5-231 (246)
136 PRK08324 short chain dehydroge 99.6 7.3E-14 1.6E-18 133.3 18.5 228 25-283 419-677 (681)
137 PRK12743 oxidoreductase; Provi 99.6 3.4E-13 7.5E-18 113.8 20.5 212 27-282 1-244 (256)
138 PRK12824 acetoacetyl-CoA reduc 99.6 4.1E-13 8.9E-18 112.4 20.8 212 27-282 1-243 (245)
139 TIGR01832 kduD 2-deoxy-D-gluco 99.6 4E-13 8.6E-18 112.8 20.4 214 26-280 3-244 (248)
140 PRK07326 short chain dehydroge 99.6 2.3E-13 5E-18 113.4 18.7 204 27-283 5-235 (237)
141 PRK06550 fabG 3-ketoacyl-(acyl 99.6 4.7E-13 1E-17 111.5 20.3 211 26-280 3-231 (235)
142 PRK06181 short chain dehydroge 99.6 1.6E-13 3.5E-18 116.2 17.4 196 29-265 2-226 (263)
143 PRK12744 short chain dehydroge 99.6 2.3E-13 5E-18 114.9 18.3 216 27-282 7-255 (257)
144 PRK07453 protochlorophyllide o 99.6 1.1E-13 2.4E-18 120.8 16.7 106 27-133 5-129 (322)
145 PRK08265 short chain dehydroge 99.6 4.1E-13 8.8E-18 113.7 19.4 216 27-281 5-244 (261)
146 PRK12937 short chain dehydroge 99.6 6.4E-13 1.4E-17 111.3 20.5 212 27-280 4-243 (245)
147 PRK06463 fabG 3-ketoacyl-(acyl 99.6 5.9E-13 1.3E-17 112.3 20.3 217 27-281 6-247 (255)
148 PRK08642 fabG 3-ketoacyl-(acyl 99.6 7.3E-13 1.6E-17 111.5 20.7 213 27-281 4-250 (253)
149 PRK12742 oxidoreductase; Provi 99.6 6.3E-13 1.4E-17 110.8 20.1 212 26-280 4-234 (237)
150 PRK07814 short chain dehydroge 99.6 5.4E-13 1.2E-17 113.1 19.4 214 26-281 8-251 (263)
151 PRK08017 oxidoreductase; Provi 99.6 2.8E-13 6.1E-18 114.3 17.6 200 27-266 1-224 (256)
152 PRK08643 acetoin reductase; Va 99.6 8.9E-13 1.9E-17 111.3 20.5 106 27-133 1-124 (256)
153 PRK06949 short chain dehydroge 99.6 6.9E-13 1.5E-17 112.0 19.8 107 25-132 6-130 (258)
154 PRK08264 short chain dehydroge 99.6 2.1E-13 4.6E-18 113.7 16.5 158 27-206 5-182 (238)
155 PRK06935 2-deoxy-D-gluconate 3 99.6 9.5E-13 2.1E-17 111.2 20.6 214 26-281 13-255 (258)
156 PRK07666 fabG 3-ketoacyl-(acyl 99.6 5.9E-13 1.3E-17 111.2 19.1 106 27-133 6-129 (239)
157 PRK05993 short chain dehydroge 99.6 1.1E-13 2.4E-18 118.3 15.0 156 27-206 3-184 (277)
158 PRK08213 gluconate 5-dehydroge 99.6 8.3E-13 1.8E-17 111.7 20.2 215 27-280 11-255 (259)
159 PRK07024 short chain dehydroge 99.6 1.1E-13 2.4E-18 116.9 14.6 158 27-206 1-187 (257)
160 PRK09291 short chain dehydroge 99.6 1.8E-13 3.9E-18 115.5 15.9 118 27-145 1-132 (257)
161 PRK07454 short chain dehydroge 99.6 4.7E-13 1E-17 111.9 18.0 190 28-266 6-225 (241)
162 PRK12936 3-ketoacyl-(acyl-carr 99.6 2.6E-13 5.6E-18 113.7 16.3 211 27-281 5-242 (245)
163 TIGR01830 3oxo_ACP_reduc 3-oxo 99.6 8.2E-13 1.8E-17 110.1 19.2 205 31-280 1-237 (239)
164 COG0300 DltE Short-chain dehyd 99.6 7.9E-13 1.7E-17 109.5 18.7 195 25-266 3-228 (265)
165 PRK07063 short chain dehydroge 99.5 6.9E-13 1.5E-17 112.2 18.9 219 27-283 6-256 (260)
166 PRK08085 gluconate 5-dehydroge 99.5 1.2E-12 2.6E-17 110.3 20.3 213 27-281 8-250 (254)
167 PRK12747 short chain dehydroge 99.5 1.7E-12 3.7E-17 109.3 21.1 213 27-281 3-250 (252)
168 PRK07478 short chain dehydroge 99.5 1.6E-12 3.5E-17 109.6 20.7 214 27-281 5-249 (254)
169 PRK06057 short chain dehydroge 99.5 8.7E-13 1.9E-17 111.3 18.9 214 26-280 5-246 (255)
170 PRK09730 putative NAD(P)-bindi 99.5 1.3E-12 2.9E-17 109.5 19.9 210 29-280 2-246 (247)
171 PRK06101 short chain dehydroge 99.5 3.3E-13 7.2E-18 112.8 16.1 156 29-206 2-177 (240)
172 PRK06483 dihydromonapterin red 99.5 1.5E-12 3.3E-17 108.5 19.9 208 27-282 1-234 (236)
173 PRK07825 short chain dehydroge 99.5 6.8E-13 1.5E-17 113.1 18.0 189 27-266 4-217 (273)
174 PRK07035 short chain dehydroge 99.5 2.1E-12 4.5E-17 108.8 20.6 213 26-280 6-249 (252)
175 PRK06114 short chain dehydroge 99.5 2.3E-12 5.1E-17 108.6 20.8 215 26-281 6-251 (254)
176 PRK06196 oxidoreductase; Provi 99.5 2.3E-13 4.9E-18 118.4 15.0 172 26-207 24-218 (315)
177 PRK06113 7-alpha-hydroxysteroi 99.5 2.8E-12 6.1E-17 108.2 21.2 216 26-283 9-252 (255)
178 PRK06172 short chain dehydroge 99.5 1.5E-12 3.3E-17 109.7 19.5 215 27-281 6-250 (253)
179 PRK08217 fabG 3-ketoacyl-(acyl 99.5 1.4E-12 3E-17 109.8 19.1 208 27-281 4-251 (253)
180 PRK05650 short chain dehydroge 99.5 2.6E-12 5.7E-17 109.3 21.0 156 29-206 1-185 (270)
181 PRK09242 tropinone reductase; 99.5 1.9E-12 4.2E-17 109.3 19.7 213 26-280 7-251 (257)
182 PRK08267 short chain dehydroge 99.5 4.2E-13 9E-18 113.6 15.6 104 29-133 2-122 (260)
183 PRK07677 short chain dehydroge 99.5 2.7E-12 5.8E-17 108.1 20.2 214 28-281 1-245 (252)
184 PRK06124 gluconate 5-dehydroge 99.5 2.9E-12 6.3E-17 108.1 20.4 213 26-280 9-251 (256)
185 PRK05693 short chain dehydroge 99.5 3.6E-13 7.7E-18 114.9 14.8 104 29-133 2-117 (274)
186 PRK07576 short chain dehydroge 99.5 2.4E-12 5.3E-17 109.1 19.3 215 26-281 7-250 (264)
187 PRK08251 short chain dehydroge 99.5 1.9E-12 4.1E-17 108.7 18.4 158 27-205 1-189 (248)
188 PRK07109 short chain dehydroge 99.5 1.8E-12 3.9E-17 113.5 18.9 195 26-265 6-231 (334)
189 PRK08277 D-mannonate oxidoredu 99.5 3.2E-12 6.9E-17 109.2 20.0 216 27-280 9-271 (278)
190 PRK06198 short chain dehydroge 99.5 2E-12 4.4E-17 109.3 18.6 219 26-281 4-254 (260)
191 PRK06947 glucose-1-dehydrogena 99.5 1.2E-12 2.7E-17 109.8 17.1 213 27-280 1-247 (248)
192 PRK05867 short chain dehydroge 99.5 3.4E-12 7.3E-17 107.6 19.6 213 26-281 7-250 (253)
193 PRK12481 2-deoxy-D-gluconate 3 99.5 3.7E-12 8.1E-17 107.2 19.8 213 26-280 6-247 (251)
194 PRK07097 gluconate 5-dehydroge 99.5 2.9E-12 6.2E-17 108.8 18.5 218 26-281 8-257 (265)
195 PRK12748 3-ketoacyl-(acyl-carr 99.5 2.9E-12 6.3E-17 108.2 18.3 209 26-281 3-254 (256)
196 TIGR01829 AcAcCoA_reduct aceto 99.5 3.7E-12 8E-17 106.4 18.7 209 29-281 1-240 (242)
197 PRK08589 short chain dehydroge 99.5 3.2E-12 7E-17 108.9 18.5 219 26-281 4-252 (272)
198 PRK06197 short chain dehydroge 99.5 8E-12 1.7E-16 108.3 21.2 106 25-131 13-136 (306)
199 TIGR02632 RhaD_aldol-ADH rhamn 99.5 1.9E-12 4.1E-17 123.1 18.2 230 22-282 408-671 (676)
200 PRK12938 acetyacetyl-CoA reduc 99.5 1.1E-11 2.5E-16 103.8 20.9 210 27-280 2-242 (246)
201 PRK07904 short chain dehydroge 99.5 5.5E-12 1.2E-16 106.3 18.9 187 27-265 7-223 (253)
202 PRK05786 fabG 3-ketoacyl-(acyl 99.5 4.6E-12 1E-16 105.6 18.3 206 27-280 4-234 (238)
203 PRK06139 short chain dehydroge 99.5 4.7E-12 1E-16 110.6 18.7 195 27-266 6-230 (330)
204 PRK08339 short chain dehydroge 99.5 9E-12 2E-16 105.6 19.8 107 26-133 6-130 (263)
205 PRK08226 short chain dehydroge 99.5 2.6E-12 5.6E-17 108.9 16.5 106 27-133 5-127 (263)
206 PRK05854 short chain dehydroge 99.5 2E-12 4.4E-17 112.3 16.1 171 23-206 9-213 (313)
207 PRK09072 short chain dehydroge 99.5 3.9E-12 8.5E-17 107.8 17.4 106 27-133 4-125 (263)
208 PRK07041 short chain dehydroge 99.5 4.6E-12 1E-16 105.1 17.2 208 32-282 1-228 (230)
209 TIGR02415 23BDH acetoin reduct 99.5 6.8E-12 1.5E-16 105.7 18.3 104 29-133 1-122 (254)
210 PRK08416 7-alpha-hydroxysteroi 99.5 1.3E-11 2.9E-16 104.4 20.0 215 25-281 5-257 (260)
211 PRK08993 2-deoxy-D-gluconate 3 99.5 7.1E-12 1.5E-16 105.6 18.3 213 26-280 8-249 (253)
212 PRK05866 short chain dehydroge 99.5 4.6E-12 9.9E-17 109.1 17.1 160 25-205 37-227 (293)
213 PRK06171 sorbitol-6-phosphate 99.5 4.2E-12 9E-17 107.8 16.4 105 26-133 7-131 (266)
214 PRK08936 glucose-1-dehydrogena 99.5 2.6E-11 5.6E-16 102.7 21.2 213 26-280 5-249 (261)
215 PRK07102 short chain dehydroge 99.5 3.1E-12 6.7E-17 107.1 15.1 104 29-133 2-121 (243)
216 PRK07062 short chain dehydroge 99.4 1.7E-11 3.7E-16 103.9 19.5 107 26-133 6-132 (265)
217 PRK06484 short chain dehydroge 99.4 1.2E-11 2.7E-16 115.0 19.8 215 27-281 268-507 (520)
218 PRK06200 2,3-dihydroxy-2,3-dih 99.4 1.1E-11 2.3E-16 105.1 17.6 217 27-281 5-257 (263)
219 PRK07069 short chain dehydroge 99.4 5.2E-12 1.1E-16 106.2 15.6 211 30-280 1-247 (251)
220 PRK05872 short chain dehydroge 99.4 2.2E-11 4.7E-16 105.1 19.4 158 26-206 7-192 (296)
221 PRK06940 short chain dehydroge 99.4 2.7E-11 5.9E-16 103.3 19.2 101 27-133 1-114 (275)
222 PRK07831 short chain dehydroge 99.4 4.9E-11 1.1E-15 101.0 20.6 212 26-279 15-259 (262)
223 PRK08177 short chain dehydroge 99.4 7.1E-12 1.5E-16 103.7 15.0 104 29-133 2-118 (225)
224 PRK06079 enoyl-(acyl carrier p 99.4 6.3E-11 1.4E-15 99.8 20.3 214 26-280 5-248 (252)
225 PRK07023 short chain dehydroge 99.4 7.1E-12 1.5E-16 104.9 14.4 155 29-205 2-184 (243)
226 PRK07792 fabG 3-ketoacyl-(acyl 99.4 1.4E-10 3E-15 100.5 22.8 107 25-132 9-133 (306)
227 PRK06924 short chain dehydroge 99.4 1.2E-11 2.7E-16 103.9 15.3 104 29-133 2-126 (251)
228 PRK08703 short chain dehydroge 99.4 3E-11 6.4E-16 100.9 16.4 107 26-133 4-133 (239)
229 PRK06953 short chain dehydroge 99.4 3E-11 6.5E-16 99.7 16.2 104 29-133 2-117 (222)
230 PRK08278 short chain dehydroge 99.4 4.5E-11 9.8E-16 101.9 17.0 106 27-133 5-135 (273)
231 TIGR01831 fabG_rel 3-oxoacyl-( 99.4 1E-10 2.2E-15 97.6 18.6 99 31-130 1-118 (239)
232 PRK07533 enoyl-(acyl carrier p 99.4 1.2E-10 2.7E-15 98.4 19.1 107 26-133 8-137 (258)
233 PRK07578 short chain dehydroge 99.4 8.4E-11 1.8E-15 95.4 17.4 93 29-133 1-100 (199)
234 PRK07832 short chain dehydroge 99.3 5.2E-11 1.1E-15 101.5 15.7 103 29-132 1-122 (272)
235 TIGR02685 pter_reduc_Leis pter 99.3 2.1E-10 4.5E-15 97.5 19.3 104 29-133 2-140 (267)
236 TIGR03325 BphB_TodD cis-2,3-di 99.3 2.4E-11 5.3E-16 102.9 13.6 106 27-133 4-129 (262)
237 PRK06505 enoyl-(acyl carrier p 99.3 1.8E-10 4E-15 98.0 18.9 214 27-281 6-251 (271)
238 PRK08261 fabG 3-ketoacyl-(acyl 99.3 1.9E-10 4.2E-15 105.0 19.8 107 26-133 208-329 (450)
239 PRK07201 short chain dehydroge 99.3 5.5E-11 1.2E-15 113.8 16.8 159 25-206 368-558 (657)
240 PRK09009 C factor cell-cell si 99.3 6.1E-10 1.3E-14 92.7 20.9 104 29-133 1-118 (235)
241 PRK05855 short chain dehydroge 99.3 5.4E-11 1.2E-15 112.1 16.4 159 25-205 312-500 (582)
242 PRK07791 short chain dehydroge 99.3 1.8E-10 3.9E-15 98.8 18.1 105 27-132 5-136 (286)
243 PRK07370 enoyl-(acyl carrier p 99.3 2.5E-10 5.4E-15 96.5 18.7 215 26-281 4-253 (258)
244 PRK05884 short chain dehydroge 99.3 5.7E-11 1.2E-15 98.2 14.3 103 30-133 2-119 (223)
245 PRK08340 glucose-1-dehydrogena 99.3 3.5E-10 7.6E-15 95.6 19.3 100 29-129 1-119 (259)
246 PRK06125 short chain dehydroge 99.3 2.8E-10 6.1E-15 96.2 18.7 106 27-133 6-126 (259)
247 PRK08945 putative oxoacyl-(acy 99.3 8.5E-11 1.8E-15 98.6 15.3 107 25-132 9-137 (247)
248 KOG2774 NAD dependent epimeras 99.3 2.1E-11 4.6E-16 96.9 10.6 244 27-296 43-299 (366)
249 KOG3019 Predicted nucleoside-d 99.3 3.1E-11 6.8E-16 95.4 11.4 239 25-300 9-262 (315)
250 PRK06603 enoyl-(acyl carrier p 99.3 5.1E-10 1.1E-14 94.7 19.7 215 26-281 6-252 (260)
251 PRK08159 enoyl-(acyl carrier p 99.3 4.3E-10 9.4E-15 95.8 19.2 215 27-282 9-255 (272)
252 PRK07984 enoyl-(acyl carrier p 99.3 5.2E-10 1.1E-14 94.7 19.5 214 27-281 5-251 (262)
253 PRK08415 enoyl-(acyl carrier p 99.3 2.9E-10 6.3E-15 96.9 18.0 106 27-133 4-132 (274)
254 PRK08594 enoyl-(acyl carrier p 99.3 9.2E-10 2E-14 93.0 20.9 214 26-280 5-252 (257)
255 TIGR01289 LPOR light-dependent 99.3 1.6E-10 3.5E-15 100.5 16.0 106 27-133 2-127 (314)
256 PRK12859 3-ketoacyl-(acyl-carr 99.3 1.9E-09 4.2E-14 90.9 20.8 209 26-280 4-254 (256)
257 PRK06484 short chain dehydroge 99.3 4.2E-10 9E-15 104.8 18.2 106 27-133 4-126 (520)
258 PRK06997 enoyl-(acyl carrier p 99.3 1.3E-09 2.8E-14 92.3 19.3 215 26-281 4-251 (260)
259 PRK08690 enoyl-(acyl carrier p 99.2 9.1E-10 2E-14 93.2 18.3 215 26-281 4-252 (261)
260 PRK12367 short chain dehydroge 99.2 7.6E-11 1.6E-15 98.7 11.4 106 27-133 13-121 (245)
261 PRK07889 enoyl-(acyl carrier p 99.2 3.5E-09 7.6E-14 89.4 20.8 106 27-133 6-134 (256)
262 smart00822 PKS_KR This enzymat 99.2 2.3E-10 5E-15 90.5 12.7 114 29-145 1-136 (180)
263 PLN02780 ketoreductase/ oxidor 99.2 4.9E-10 1.1E-14 97.6 15.4 159 27-205 52-243 (320)
264 PRK07424 bifunctional sterol d 99.2 1.9E-10 4.1E-15 102.3 12.5 108 25-133 175-287 (406)
265 KOG1205 Predicted dehydrogenas 99.2 1.2E-09 2.7E-14 91.3 14.7 121 25-146 9-151 (282)
266 PRK08862 short chain dehydroge 99.1 4.3E-09 9.3E-14 87.1 15.8 105 27-132 4-128 (227)
267 KOG4039 Serine/threonine kinas 99.1 1.5E-09 3.3E-14 82.7 11.5 155 27-211 17-177 (238)
268 PRK08303 short chain dehydroge 99.1 7.2E-09 1.6E-13 89.7 16.4 107 26-133 6-145 (305)
269 TIGR01500 sepiapter_red sepiap 99.1 3.4E-09 7.4E-14 89.4 13.8 104 30-133 2-135 (256)
270 KOG1203 Predicted dehydrogenas 99.1 5.5E-09 1.2E-13 91.5 14.9 114 27-144 78-200 (411)
271 COG3967 DltE Short-chain dehyd 99.1 6.7E-09 1.4E-13 81.3 13.3 166 27-206 4-188 (245)
272 KOG1200 Mitochondrial/plastidi 99.0 6.4E-08 1.4E-12 75.2 17.0 217 26-280 12-253 (256)
273 PRK05599 hypothetical protein; 99.0 2.2E-08 4.7E-13 84.0 15.9 100 29-130 1-119 (246)
274 KOG1201 Hydroxysteroid 17-beta 99.0 1.1E-08 2.5E-13 85.0 13.2 127 22-149 32-177 (300)
275 PLN00015 protochlorophyllide r 99.0 2E-08 4.3E-13 87.2 14.5 101 32-133 1-121 (308)
276 PF00106 adh_short: short chai 99.0 1.2E-08 2.5E-13 80.2 11.8 115 29-145 1-135 (167)
277 PF13561 adh_short_C2: Enoyl-( 98.9 2.7E-08 5.9E-13 83.1 12.4 204 35-280 1-239 (241)
278 PLN02730 enoyl-[acyl-carrier-p 98.9 2.1E-07 4.4E-12 80.2 18.0 215 26-281 7-286 (303)
279 KOG1611 Predicted short chain- 98.9 1.2E-07 2.6E-12 75.6 14.1 105 27-131 2-128 (249)
280 KOG0725 Reductases with broad 98.9 5.2E-07 1.1E-11 76.4 18.7 222 25-282 5-262 (270)
281 KOG1209 1-Acyl dihydroxyaceton 98.8 6.9E-08 1.5E-12 76.1 11.3 106 27-133 6-126 (289)
282 KOG1610 Corticosteroid 11-beta 98.8 2.4E-07 5.3E-12 77.6 15.0 121 24-145 25-168 (322)
283 KOG1208 Dehydrogenases with di 98.8 2.3E-07 4.9E-12 79.9 14.6 170 26-206 33-232 (314)
284 PRK12428 3-alpha-hydroxysteroi 98.8 2.2E-07 4.7E-12 77.7 13.8 205 44-280 1-229 (241)
285 PF08659 KR: KR domain; Inter 98.8 2.2E-07 4.8E-12 74.1 13.2 114 30-145 2-136 (181)
286 COG1028 FabG Dehydrogenases wi 98.7 3.2E-07 7E-12 77.0 14.0 118 26-145 3-143 (251)
287 PRK06300 enoyl-(acyl carrier p 98.7 8.5E-07 1.9E-11 76.3 16.5 108 25-133 5-166 (299)
288 cd01336 MDH_cytoplasmic_cytoso 98.7 2.2E-07 4.7E-12 80.8 11.1 109 29-139 3-124 (325)
289 TIGR02813 omega_3_PfaA polyket 98.6 5.6E-07 1.2E-11 95.7 15.2 107 27-133 1996-2166(2582)
290 KOG4288 Predicted oxidoreducta 98.6 3.5E-07 7.7E-12 73.0 9.9 202 29-268 53-266 (283)
291 PRK08309 short chain dehydroge 98.6 9.1E-08 2E-12 75.7 6.7 63 29-93 1-69 (177)
292 PTZ00325 malate dehydrogenase; 98.6 7.2E-07 1.6E-11 77.0 11.8 110 25-136 5-118 (321)
293 KOG4169 15-hydroxyprostaglandi 98.5 1.3E-06 2.9E-11 69.7 10.8 102 27-133 4-124 (261)
294 COG1748 LYS9 Saccharopine dehy 98.5 4.9E-07 1.1E-11 79.2 9.2 73 29-102 2-78 (389)
295 PLN00106 malate dehydrogenase 98.5 1.2E-06 2.5E-11 75.8 11.2 111 28-140 18-132 (323)
296 PRK06720 hypothetical protein; 98.5 6.8E-07 1.5E-11 70.3 8.4 77 27-104 15-105 (169)
297 KOG1207 Diacetyl reductase/L-x 98.5 8.6E-07 1.9E-11 67.7 7.8 104 25-129 4-118 (245)
298 PRK09620 hypothetical protein; 98.5 4.7E-07 1E-11 74.5 7.0 77 27-104 2-99 (229)
299 PRK06732 phosphopantothenate-- 98.4 2E-06 4.3E-11 71.1 8.9 68 35-103 23-92 (229)
300 KOG1210 Predicted 3-ketosphing 98.3 1.6E-05 3.6E-10 66.7 13.4 116 29-145 34-172 (331)
301 KOG1478 3-keto sterol reductas 98.3 6E-06 1.3E-10 67.0 10.3 124 26-149 1-182 (341)
302 PF03435 Saccharop_dh: Sacchar 98.2 3.7E-06 8.1E-11 75.3 8.2 71 31-102 1-77 (386)
303 KOG1014 17 beta-hydroxysteroid 98.2 5.1E-06 1.1E-10 69.7 8.3 106 27-133 48-173 (312)
304 PRK05086 malate dehydrogenase; 98.2 1.4E-05 3E-10 69.2 11.0 105 29-137 1-112 (312)
305 cd00704 MDH Malate dehydrogena 98.2 1.7E-05 3.7E-10 68.9 11.2 104 30-141 2-124 (323)
306 TIGR00715 precor6x_red precorr 98.2 1.5E-05 3.2E-10 66.7 10.1 95 29-140 1-98 (256)
307 cd01078 NAD_bind_H4MPT_DH NADP 98.2 6.7E-06 1.5E-10 66.3 7.2 73 26-99 26-104 (194)
308 TIGR01758 MDH_euk_cyt malate d 98.1 3.3E-05 7.1E-10 67.2 10.7 103 30-140 1-122 (324)
309 PRK14982 acyl-ACP reductase; P 98.0 1.2E-05 2.6E-10 69.7 5.3 72 26-102 153-225 (340)
310 PRK05579 bifunctional phosphop 97.8 7.6E-05 1.6E-09 66.6 8.1 74 25-103 185-278 (399)
311 PF00056 Ldh_1_N: lactate/mala 97.8 0.0002 4.3E-09 54.5 8.8 104 29-139 1-114 (141)
312 cd05294 LDH-like_MDH_nadp A la 97.7 0.00027 5.8E-09 61.2 9.0 103 29-138 1-116 (309)
313 cd01338 MDH_choloroplast_like 97.7 0.00067 1.4E-08 59.0 11.5 106 28-138 2-123 (322)
314 PRK12548 shikimate 5-dehydroge 97.5 0.00029 6.4E-09 60.4 7.3 72 26-99 124-206 (289)
315 KOG2733 Uncharacterized membra 97.5 0.00015 3.3E-09 61.9 4.9 72 30-102 7-93 (423)
316 PRK05442 malate dehydrogenase; 97.5 0.0018 4E-08 56.3 11.5 99 28-134 4-120 (326)
317 PLN02968 Probable N-acetyl-gam 97.5 0.00014 3E-09 64.6 4.6 39 27-65 37-75 (381)
318 TIGR01759 MalateDH-SF1 malate 97.4 0.0014 2.9E-08 57.1 10.2 105 28-135 3-120 (323)
319 COG0569 TrkA K+ transport syst 97.4 0.0004 8.6E-09 57.3 6.4 67 29-97 1-71 (225)
320 cd01337 MDH_glyoxysomal_mitoch 97.4 0.0011 2.3E-08 57.3 9.1 109 29-142 1-116 (310)
321 KOG1199 Short-chain alcohol de 97.4 0.00016 3.5E-09 55.4 3.6 104 27-131 8-132 (260)
322 PRK00066 ldh L-lactate dehydro 97.3 0.0042 9.1E-08 53.9 12.1 101 28-139 6-118 (315)
323 TIGR01772 MDH_euk_gproteo mala 97.3 0.0014 3E-08 56.7 9.0 108 30-142 1-115 (312)
324 PLN02819 lysine-ketoglutarate 97.3 0.00094 2E-08 66.2 8.6 74 27-101 568-657 (1042)
325 PF04127 DFP: DNA / pantothena 97.3 0.0012 2.6E-08 52.5 7.3 75 27-104 2-94 (185)
326 PRK13656 trans-2-enoyl-CoA red 97.3 0.0019 4E-08 56.9 8.9 75 27-103 40-142 (398)
327 PRK09496 trkA potassium transp 97.2 0.00062 1.3E-08 62.4 6.3 69 29-99 1-72 (453)
328 cd05291 HicDH_like L-2-hydroxy 97.2 0.0036 7.8E-08 54.2 10.4 99 29-138 1-112 (306)
329 TIGR00521 coaBC_dfp phosphopan 97.2 0.0014 3.1E-08 58.3 7.8 103 26-133 183-312 (390)
330 PF01118 Semialdhyde_dh: Semia 97.1 0.001 2.2E-08 49.1 5.1 35 30-64 1-35 (121)
331 TIGR02114 coaB_strep phosphopa 97.1 0.0013 2.8E-08 54.3 5.8 63 35-103 22-91 (227)
332 PRK00436 argC N-acetyl-gamma-g 97.1 0.0011 2.4E-08 58.3 5.6 36 28-63 2-37 (343)
333 PLN00112 malate dehydrogenase 97.0 0.0092 2E-07 53.9 11.3 105 28-142 100-225 (444)
334 PF02254 TrkA_N: TrkA-N domain 97.0 0.00098 2.1E-08 48.7 4.3 62 31-94 1-64 (116)
335 PF01488 Shikimate_DH: Shikima 97.0 0.00012 2.6E-09 55.3 -0.7 72 25-101 9-84 (135)
336 KOG1204 Predicted dehydrogenas 97.0 0.0034 7.4E-08 50.6 7.0 103 26-133 4-130 (253)
337 PRK14874 aspartate-semialdehyd 96.9 0.0026 5.7E-08 55.8 6.9 35 29-64 2-39 (334)
338 PRK00048 dihydrodipicolinate r 96.8 0.006 1.3E-07 51.4 8.1 35 29-63 2-37 (257)
339 COG0039 Mdh Malate/lactate deh 96.8 0.0074 1.6E-07 51.8 8.6 104 29-142 1-117 (313)
340 cd00650 LDH_MDH_like NAD-depen 96.8 0.0062 1.3E-07 51.6 8.0 109 31-142 1-118 (263)
341 cd05290 LDH_3 A subgroup of L- 96.8 0.024 5.2E-07 49.0 11.6 103 30-141 1-117 (307)
342 PRK08057 cobalt-precorrin-6x r 96.8 0.019 4.2E-07 47.9 10.6 96 27-140 1-98 (248)
343 KOG0172 Lysine-ketoglutarate r 96.8 0.0022 4.9E-08 55.6 5.0 72 27-99 1-75 (445)
344 PTZ00117 malate dehydrogenase; 96.8 0.011 2.4E-07 51.5 9.4 105 27-140 4-119 (319)
345 COG0623 FabI Enoyl-[acyl-carri 96.7 0.24 5.3E-06 40.3 16.0 107 26-133 4-133 (259)
346 PRK08664 aspartate-semialdehyd 96.7 0.0027 5.9E-08 56.0 5.3 38 26-63 1-38 (349)
347 PRK06223 malate dehydrogenase; 96.7 0.0093 2E-07 51.7 8.5 104 29-137 3-113 (307)
348 cd05292 LDH_2 A subgroup of L- 96.6 0.0097 2.1E-07 51.6 8.2 98 29-137 1-110 (308)
349 TIGR01763 MalateDH_bact malate 96.6 0.012 2.5E-07 51.0 8.5 105 29-138 2-113 (305)
350 cd05293 LDH_1 A subgroup of L- 96.6 0.043 9.3E-07 47.6 11.8 105 28-142 3-119 (312)
351 cd01080 NAD_bind_m-THF_DH_Cycl 96.6 0.0095 2.1E-07 46.6 6.8 55 25-100 41-95 (168)
352 PRK04148 hypothetical protein; 96.6 0.0043 9.3E-08 46.3 4.6 62 28-94 17-79 (134)
353 PRK14106 murD UDP-N-acetylmura 96.5 0.0052 1.1E-07 56.3 5.9 68 27-101 4-77 (450)
354 KOG1494 NAD-dependent malate d 96.5 0.029 6.3E-07 46.8 9.4 110 27-138 27-140 (345)
355 PLN02602 lactate dehydrogenase 96.5 0.0088 1.9E-07 52.6 6.9 104 29-142 38-153 (350)
356 cd05295 MDH_like Malate dehydr 96.5 0.042 9.1E-07 49.8 11.1 98 28-135 123-240 (452)
357 PRK09496 trkA potassium transp 96.4 0.0077 1.7E-07 55.2 6.1 68 27-96 230-301 (453)
358 TIGR01850 argC N-acetyl-gamma- 96.4 0.0054 1.2E-07 54.0 4.9 35 29-63 1-36 (346)
359 TIGR01757 Malate-DH_plant mala 96.3 0.048 1E-06 48.5 10.7 97 28-134 44-160 (387)
360 PTZ00082 L-lactate dehydrogena 96.3 0.073 1.6E-06 46.4 11.7 102 28-137 6-122 (321)
361 PRK06019 phosphoribosylaminoim 96.3 0.02 4.3E-07 51.1 8.1 65 28-95 2-66 (372)
362 PRK10669 putative cation:proto 96.3 0.0072 1.6E-07 57.0 5.5 61 27-89 416-477 (558)
363 TIGR01915 npdG NADPH-dependent 96.3 0.0066 1.4E-07 49.9 4.6 37 29-66 1-37 (219)
364 TIGR01296 asd_B aspartate-semi 96.2 0.0088 1.9E-07 52.5 5.5 33 30-63 1-36 (339)
365 PRK05671 aspartate-semialdehyd 96.2 0.011 2.4E-07 51.7 6.1 33 29-62 5-40 (336)
366 PF01113 DapB_N: Dihydrodipico 96.2 0.0093 2E-07 44.2 4.8 69 29-99 1-74 (124)
367 KOG1198 Zinc-binding oxidoredu 96.2 0.018 3.9E-07 50.7 7.3 77 24-102 154-235 (347)
368 PF02826 2-Hacid_dh_C: D-isome 96.2 0.0096 2.1E-07 47.2 5.2 63 25-97 33-96 (178)
369 PRK11199 tyrA bifunctional cho 96.2 0.015 3.2E-07 51.9 6.6 36 27-63 97-132 (374)
370 COG3268 Uncharacterized conser 96.1 0.0069 1.5E-07 51.7 4.0 75 27-102 5-81 (382)
371 cd01065 NAD_bind_Shikimate_DH 96.1 0.0054 1.2E-07 47.3 3.1 69 27-100 18-89 (155)
372 TIGR02853 spore_dpaA dipicolin 96.1 0.015 3.3E-07 49.7 6.1 68 25-99 148-216 (287)
373 cd00300 LDH_like L-lactate deh 96.1 0.016 3.5E-07 50.0 6.3 100 31-140 1-112 (300)
374 COG0002 ArgC Acetylglutamate s 96.1 0.015 3.3E-07 50.1 5.9 37 27-63 1-37 (349)
375 PRK09288 purT phosphoribosylgl 96.0 0.034 7.4E-07 50.0 8.5 68 27-97 11-80 (395)
376 COG2085 Predicted dinucleotide 96.0 0.011 2.5E-07 47.3 4.5 35 29-65 2-36 (211)
377 PRK14192 bifunctional 5,10-met 96.0 0.022 4.7E-07 48.6 6.5 54 26-100 157-210 (283)
378 PRK08306 dipicolinate synthase 95.9 0.022 4.7E-07 49.1 6.3 66 27-99 151-217 (296)
379 PRK07688 thiamine/molybdopteri 95.9 0.078 1.7E-06 46.6 9.6 36 26-63 22-58 (339)
380 PRK14175 bifunctional 5,10-met 95.8 0.031 6.7E-07 47.5 6.7 55 26-101 156-210 (286)
381 PRK03659 glutathione-regulated 95.8 0.018 3.8E-07 54.8 5.7 65 28-94 400-466 (601)
382 PRK00258 aroE shikimate 5-dehy 95.7 0.0062 1.4E-07 52.0 2.2 39 26-66 121-160 (278)
383 PF03446 NAD_binding_2: NAD bi 95.6 0.016 3.5E-07 45.2 4.1 62 29-99 2-64 (163)
384 PLN02383 aspartate semialdehyd 95.6 0.043 9.3E-07 48.3 7.0 27 27-54 6-32 (344)
385 cd01339 LDH-like_MDH L-lactate 95.6 0.055 1.2E-06 46.8 7.6 98 31-138 1-110 (300)
386 TIGR01142 purT phosphoribosylg 95.6 0.048 1E-06 48.8 7.5 65 30-97 1-67 (380)
387 PRK15469 ghrA bifunctional gly 95.6 0.054 1.2E-06 47.0 7.4 63 25-97 133-195 (312)
388 PRK13243 glyoxylate reductase; 95.5 0.023 5E-07 49.8 5.1 65 25-99 147-212 (333)
389 PRK14619 NAD(P)H-dependent gly 95.5 0.039 8.4E-07 47.9 6.5 35 28-64 4-38 (308)
390 PF00070 Pyr_redox: Pyridine n 95.5 0.036 7.9E-07 37.4 5.0 34 30-65 1-34 (80)
391 PLN02948 phosphoribosylaminoim 95.5 0.084 1.8E-06 49.9 9.0 68 26-96 20-87 (577)
392 TIGR00518 alaDH alanine dehydr 95.5 0.035 7.6E-07 49.4 6.2 72 27-100 166-238 (370)
393 COG0026 PurK Phosphoribosylami 95.5 0.073 1.6E-06 46.4 7.8 64 29-95 2-65 (375)
394 PLN02928 oxidoreductase family 95.5 0.035 7.7E-07 48.9 6.1 69 25-95 156-229 (347)
395 TIGR03026 NDP-sugDHase nucleot 95.4 0.051 1.1E-06 49.2 7.1 35 30-66 2-36 (411)
396 PF00899 ThiF: ThiF family; I 95.4 0.22 4.8E-06 37.4 9.5 34 28-63 2-36 (135)
397 smart00859 Semialdhyde_dh Semi 95.4 0.028 6.1E-07 41.4 4.6 31 30-60 1-31 (122)
398 PRK08818 prephenate dehydrogen 95.4 0.042 9E-07 48.7 6.2 35 28-62 4-38 (370)
399 PF03807 F420_oxidored: NADP o 95.4 0.032 6.8E-07 39.1 4.5 62 30-99 1-68 (96)
400 PRK06598 aspartate-semialdehyd 95.4 0.046 9.9E-07 48.3 6.3 34 29-62 2-38 (369)
401 PRK14194 bifunctional 5,10-met 95.3 0.047 1E-06 46.7 6.1 39 25-64 156-194 (301)
402 PRK12475 thiamine/molybdopteri 95.3 0.16 3.5E-06 44.6 9.6 37 25-63 21-58 (338)
403 PRK03562 glutathione-regulated 95.3 0.026 5.6E-07 53.9 5.0 65 28-94 400-466 (621)
404 cd01079 NAD_bind_m-THF_DH NAD 95.3 0.092 2E-06 41.8 7.3 76 25-101 59-135 (197)
405 cd05212 NAD_bind_m-THF_DH_Cycl 95.3 0.095 2.1E-06 39.6 7.1 54 25-99 25-78 (140)
406 PRK11863 N-acetyl-gamma-glutam 95.3 0.037 7.9E-07 47.8 5.4 37 27-63 1-37 (313)
407 PF02882 THF_DHG_CYH_C: Tetrah 95.2 0.098 2.1E-06 40.5 7.1 55 25-100 33-87 (160)
408 cd05213 NAD_bind_Glutamyl_tRNA 95.2 0.02 4.3E-07 49.7 3.6 67 27-99 177-245 (311)
409 PF03721 UDPG_MGDP_dh_N: UDP-g 95.2 0.019 4.1E-07 45.8 3.2 36 29-66 1-36 (185)
410 TIGR01771 L-LDH-NAD L-lactate 95.2 0.23 4.9E-06 42.9 10.0 97 33-140 1-110 (299)
411 PRK13940 glutamyl-tRNA reducta 95.2 0.019 4.2E-07 51.7 3.5 73 26-102 179-252 (414)
412 TIGR01161 purK phosphoribosyla 95.2 0.065 1.4E-06 47.5 6.8 63 30-95 1-63 (352)
413 PRK13982 bifunctional SbtC-lik 95.1 0.094 2E-06 47.9 7.7 74 25-103 253-345 (475)
414 COG0111 SerA Phosphoglycerate 95.0 0.063 1.4E-06 46.8 6.2 66 25-99 139-205 (324)
415 PRK11559 garR tartronate semia 95.0 0.04 8.7E-07 47.5 4.9 37 27-65 1-37 (296)
416 PRK12480 D-lactate dehydrogena 94.9 0.052 1.1E-06 47.5 5.5 59 25-95 143-201 (330)
417 cd01075 NAD_bind_Leu_Phe_Val_D 94.9 0.06 1.3E-06 43.5 5.3 39 25-65 25-63 (200)
418 PRK10537 voltage-gated potassi 94.9 0.082 1.8E-06 47.4 6.6 67 28-97 240-307 (393)
419 PRK06487 glycerate dehydrogena 94.8 0.069 1.5E-06 46.5 5.9 60 25-99 145-205 (317)
420 PRK06436 glycerate dehydrogena 94.8 0.069 1.5E-06 46.1 5.8 58 25-95 119-176 (303)
421 TIGR01851 argC_other N-acetyl- 94.8 0.065 1.4E-06 46.1 5.6 34 29-62 2-35 (310)
422 PF02571 CbiJ: Precorrin-6x re 94.8 0.31 6.8E-06 40.7 9.5 93 29-139 1-98 (249)
423 PRK07574 formate dehydrogenase 94.8 0.052 1.1E-06 48.4 5.1 66 25-99 189-256 (385)
424 PRK06129 3-hydroxyacyl-CoA deh 94.7 0.035 7.6E-07 48.2 3.9 35 29-65 3-37 (308)
425 PRK08655 prephenate dehydrogen 94.7 0.042 9.1E-07 50.1 4.5 36 29-65 1-36 (437)
426 PRK14188 bifunctional 5,10-met 94.7 0.085 1.8E-06 45.2 6.0 37 26-63 156-193 (296)
427 PRK15438 erythronate-4-phospha 94.7 0.082 1.8E-06 47.0 6.1 62 25-99 113-175 (378)
428 TIGR00978 asd_EA aspartate-sem 94.6 0.055 1.2E-06 47.7 4.9 34 29-62 1-34 (341)
429 PRK08410 2-hydroxyacid dehydro 94.6 0.088 1.9E-06 45.7 6.0 62 25-99 142-204 (311)
430 PRK14189 bifunctional 5,10-met 94.6 0.12 2.7E-06 43.9 6.7 55 26-101 156-210 (285)
431 PRK08229 2-dehydropantoate 2-r 94.6 0.047 1E-06 48.0 4.4 35 27-63 1-35 (341)
432 KOG0023 Alcohol dehydrogenase, 94.6 0.14 3.1E-06 43.7 6.9 72 27-100 181-254 (360)
433 PRK00045 hemA glutamyl-tRNA re 94.6 0.041 9E-07 50.0 4.0 67 26-99 180-249 (423)
434 PRK06849 hypothetical protein; 94.5 0.069 1.5E-06 48.0 5.3 37 27-64 3-39 (389)
435 COG1004 Ugd Predicted UDP-gluc 94.5 0.14 2.9E-06 45.3 6.7 73 29-103 1-87 (414)
436 PLN00203 glutamyl-tRNA reducta 94.5 0.045 9.7E-07 50.8 4.1 69 26-99 264-336 (519)
437 PRK00257 erythronate-4-phospha 94.4 0.11 2.3E-06 46.4 6.2 62 25-99 113-175 (381)
438 PRK06932 glycerate dehydrogena 94.4 0.096 2.1E-06 45.5 5.9 61 25-99 144-205 (314)
439 PRK13403 ketol-acid reductoiso 94.4 0.097 2.1E-06 45.2 5.7 64 25-98 13-77 (335)
440 PRK06728 aspartate-semialdehyd 94.4 0.16 3.4E-06 44.6 7.0 35 28-62 5-42 (347)
441 PF02737 3HCDH_N: 3-hydroxyacy 94.3 0.05 1.1E-06 43.2 3.6 34 30-65 1-34 (180)
442 PRK11064 wecC UDP-N-acetyl-D-m 94.3 0.057 1.2E-06 48.9 4.4 38 28-67 3-40 (415)
443 TIGR03693 ocin_ThiF_like putat 94.3 0.4 8.7E-06 44.9 9.7 72 27-100 128-212 (637)
444 PRK11880 pyrroline-5-carboxyla 94.3 0.05 1.1E-06 46.1 3.7 37 27-65 1-40 (267)
445 PRK06249 2-dehydropantoate 2-r 94.3 0.088 1.9E-06 45.8 5.3 36 27-64 4-39 (313)
446 PRK11790 D-3-phosphoglycerate 94.3 0.095 2.1E-06 47.3 5.6 63 25-99 148-211 (409)
447 PRK00094 gpsA NAD(P)H-dependen 94.2 0.048 1E-06 47.6 3.5 35 29-65 2-36 (325)
448 TIGR01809 Shik-DH-AROM shikima 94.2 0.053 1.1E-06 46.4 3.7 69 27-99 124-197 (282)
449 PRK14179 bifunctional 5,10-met 94.2 0.16 3.4E-06 43.2 6.4 33 26-59 156-188 (284)
450 cd00757 ThiF_MoeB_HesA_family 94.1 0.55 1.2E-05 38.8 9.6 35 27-63 20-55 (228)
451 TIGR00872 gnd_rel 6-phosphoglu 94.1 0.092 2E-06 45.3 5.1 35 30-66 2-36 (298)
452 PRK10792 bifunctional 5,10-met 94.1 0.18 3.9E-06 42.9 6.6 55 26-101 157-211 (285)
453 PF00670 AdoHcyase_NAD: S-aden 94.1 0.09 2E-06 40.6 4.4 62 27-99 22-84 (162)
454 TIGR01327 PGDH D-3-phosphoglyc 94.1 0.11 2.4E-06 48.5 6.0 66 25-99 135-201 (525)
455 TIGR01035 hemA glutamyl-tRNA r 94.1 0.07 1.5E-06 48.4 4.4 67 26-99 178-247 (417)
456 KOG4022 Dihydropteridine reduc 94.1 0.47 1E-05 36.4 8.1 37 28-65 3-39 (236)
457 PRK05476 S-adenosyl-L-homocyst 94.1 0.13 2.9E-06 46.4 6.1 62 27-98 211-273 (425)
458 cd01485 E1-1_like Ubiquitin ac 94.1 1.1 2.4E-05 36.1 11.0 36 27-64 18-54 (198)
459 PTZ00075 Adenosylhomocysteinas 94.1 0.15 3.3E-06 46.5 6.4 63 25-97 251-314 (476)
460 PRK13581 D-3-phosphoglycerate 94.1 0.14 3E-06 47.9 6.5 65 25-99 137-202 (526)
461 TIGR01505 tartro_sem_red 2-hyd 94.0 0.037 8E-07 47.6 2.4 35 30-66 1-35 (291)
462 COG0373 HemA Glutamyl-tRNA red 94.0 0.11 2.4E-06 46.4 5.3 69 26-99 176-245 (414)
463 COG0289 DapB Dihydrodipicolina 93.9 0.28 6.1E-06 40.8 7.2 66 28-93 2-89 (266)
464 PRK14190 bifunctional 5,10-met 93.9 0.24 5.1E-06 42.2 6.9 54 26-100 156-209 (284)
465 PRK14173 bifunctional 5,10-met 93.9 0.22 4.9E-06 42.3 6.7 55 26-101 153-207 (287)
466 PRK06719 precorrin-2 dehydroge 93.9 0.2 4.4E-06 38.7 6.0 34 26-61 11-44 (157)
467 PRK05597 molybdopterin biosynt 93.8 0.63 1.4E-05 41.2 9.9 36 26-63 26-62 (355)
468 COG1052 LdhA Lactate dehydroge 93.8 0.22 4.8E-06 43.4 6.8 65 25-99 143-208 (324)
469 PRK12549 shikimate 5-dehydroge 93.8 0.034 7.4E-07 47.6 1.8 38 27-66 126-164 (284)
470 PLN03139 formate dehydrogenase 93.8 0.1 2.2E-06 46.6 4.9 62 25-95 196-258 (386)
471 COG0604 Qor NADPH:quinone redu 93.8 0.091 2E-06 46.0 4.4 37 28-65 143-179 (326)
472 TIGR02356 adenyl_thiF thiazole 93.8 0.4 8.6E-06 38.8 7.9 35 27-63 20-55 (202)
473 PRK08605 D-lactate dehydrogena 93.8 0.12 2.6E-06 45.4 5.2 63 25-97 143-205 (332)
474 PRK05479 ketol-acid reductoiso 93.7 0.15 3.2E-06 44.5 5.4 64 26-99 15-80 (330)
475 PRK14172 bifunctional 5,10-met 93.6 0.26 5.6E-06 41.7 6.7 37 25-62 155-191 (278)
476 PLN02353 probable UDP-glucose 93.6 0.18 4E-06 46.3 6.2 36 29-66 2-39 (473)
477 PRK08040 putative semialdehyde 93.6 0.15 3.3E-06 44.6 5.5 36 27-62 3-40 (336)
478 PRK14180 bifunctional 5,10-met 93.6 0.26 5.6E-06 41.9 6.6 36 26-62 156-191 (282)
479 PRK15461 NADH-dependent gamma- 93.5 0.098 2.1E-06 45.1 4.2 36 29-66 2-37 (296)
480 PRK14176 bifunctional 5,10-met 93.5 0.29 6.2E-06 41.7 6.7 55 26-101 162-216 (287)
481 PRK14191 bifunctional 5,10-met 93.5 0.29 6.3E-06 41.6 6.8 54 26-100 155-208 (285)
482 PLN02494 adenosylhomocysteinas 93.5 0.21 4.6E-06 45.5 6.2 62 27-98 253-315 (477)
483 KOG4288 Predicted oxidoreducta 93.5 0.1 2.3E-06 42.4 3.8 71 28-99 2-78 (283)
484 PRK09310 aroDE bifunctional 3- 93.4 0.054 1.2E-06 50.0 2.6 38 26-65 330-367 (477)
485 PRK14177 bifunctional 5,10-met 93.4 0.3 6.5E-06 41.5 6.8 36 26-62 157-192 (284)
486 TIGR00507 aroE shikimate 5-deh 93.4 0.11 2.4E-06 44.1 4.3 37 27-65 116-152 (270)
487 PRK14186 bifunctional 5,10-met 93.4 0.29 6.3E-06 41.9 6.7 56 25-101 155-210 (297)
488 PRK14170 bifunctional 5,10-met 93.4 0.3 6.5E-06 41.5 6.7 55 26-101 155-209 (284)
489 cd00401 AdoHcyase S-adenosyl-L 93.3 0.23 4.9E-06 44.8 6.2 63 27-99 201-264 (413)
490 COG0027 PurT Formate-dependent 93.3 0.39 8.4E-06 41.0 7.0 64 27-94 11-75 (394)
491 PRK09260 3-hydroxybutyryl-CoA 93.3 0.097 2.1E-06 44.9 3.8 36 29-66 2-37 (288)
492 PRK06718 precorrin-2 dehydroge 93.3 0.18 3.9E-06 40.8 5.1 36 26-63 8-43 (202)
493 TIGR01745 asd_gamma aspartate- 93.3 0.2 4.3E-06 44.2 5.7 27 29-55 1-27 (366)
494 TIGR00936 ahcY adenosylhomocys 93.2 0.24 5.1E-06 44.5 6.1 38 26-65 193-230 (406)
495 PRK14169 bifunctional 5,10-met 93.2 0.33 7.1E-06 41.2 6.7 35 26-61 154-188 (282)
496 PRK06522 2-dehydropantoate 2-r 93.2 0.13 2.8E-06 44.4 4.5 35 29-65 1-35 (304)
497 PRK14166 bifunctional 5,10-met 93.2 0.32 6.9E-06 41.3 6.5 55 26-101 155-209 (282)
498 PRK07530 3-hydroxybutyryl-CoA 93.2 0.13 2.7E-06 44.3 4.3 36 28-65 4-39 (292)
499 PRK12749 quinate/shikimate deh 93.2 0.16 3.5E-06 43.5 4.9 36 27-64 123-159 (288)
500 PRK08762 molybdopterin biosynt 93.1 0.77 1.7E-05 41.1 9.3 35 26-62 133-168 (376)
No 1
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=1.2e-33 Score=230.85 Aligned_cols=257 Identities=16% Similarity=0.137 Sum_probs=198.8
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCC--eEEEEecCCCHHHHHHHHhccC--ceeEEeeccc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSS--YCFISCDLLNPLDIKRKLTLLE--DVTHIFWVTW 104 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~D~~~~~~l~~~~~~~~--~V~~~~~~~~ 104 (303)
++||||||+||||++.+.+|+ +.||+|+++++-.......-.. +.++++|+.|.+.+.++|+... .|+|.|+...
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll-~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~ 79 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLL-KTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASIS 79 (329)
T ss_pred CeEEEecCcchhHHHHHHHHH-HCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECccccc
Confidence 489999999999999999999 7999999999865443211122 6899999999999999998765 5999999988
Q ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHH
Q 042242 105 ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDL 184 (303)
Q Consensus 105 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~ 184 (303)
..++-..|.++++.|+.++.+|+++|++++ +..+++.|++.+||.+ ...|+.|+.|..|.+| |+.+|+
T Consensus 80 VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~g--v~~~vFSStAavYG~p-------~~~PI~E~~~~~p~NP---YG~sKl 147 (329)
T COG1087 80 VGESVQNPLKYYDNNVVGTLNLIEAMLQTG--VKKFIFSSTAAVYGEP-------TTSPISETSPLAPINP---YGRSKL 147 (329)
T ss_pred cchhhhCHHHHHhhchHhHHHHHHHHHHhC--CCEEEEecchhhcCCC-------CCcccCCCCCCCCCCc---chhHHH
Confidence 899989999999999999999999999984 5667776777788766 3568999999999999 999999
Q ss_pred HHHH-----hcCC-cceEEecCCceeecCCC-------CccchhhHHHHHHHHhhhCCCceeeCCch-hhh-hhhcccCc
Q 042242 185 LKEK-----LAGK-VAWSVHRPGLLLGSSHR-------SLYNFLGCLCVYGAVCKHLNLPFVFGGTR-EIW-EEYCLDGS 249 (303)
Q Consensus 185 ~~e~-----~~~~-~~~~ilRp~~v~G~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~-~~~~~~~~ 249 (303)
+.|. .... ++++++|.+++.|..+. .+.+.+.++....++.+ ...+.+.|+. ... ...+.|++
T Consensus 148 m~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~--r~~l~ifG~DY~T~DGT~iRDYI 225 (329)
T COG1087 148 MSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGK--RDKLFIFGDDYDTKDGTCIRDYI 225 (329)
T ss_pred HHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcC--CceeEEeCCCCCCCCCCeeeeee
Confidence 8882 2323 99999999999996543 12222333333333332 2223333322 111 26789999
Q ss_pred cHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 250 DSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 250 ~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
|+.|+|.+++.+++.-...+ ...+||++.|.-.|..|+++.+.++.|++.|
T Consensus 226 HV~DLA~aH~~Al~~L~~~g-~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip 276 (329)
T COG1087 226 HVDDLADAHVLALKYLKEGG-SNNIFNLGSGNGFSVLEVIEAAKKVTGRDIP 276 (329)
T ss_pred ehhHHHHHHHHHHHHHHhCC-ceeEEEccCCCceeHHHHHHHHHHHhCCcCc
Confidence 99999999999876544322 1158999999999999999999999999887
No 2
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=100.00 E-value=3.8e-32 Score=239.25 Aligned_cols=253 Identities=19% Similarity=0.127 Sum_probs=181.9
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc------------ccCCCeEEEEecCCCHHHHHHHHh
Q 042242 24 EVDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA------------IQSSSYCFISCDLLNPLDIKRKLT 91 (303)
Q Consensus 24 ~~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~------------~~~~~~~~~~~D~~~~~~l~~~~~ 91 (303)
...++|+|||||||||||++|+++|+ +.|++|++++|...... ....+++++.+|+.|.+.+..+++
T Consensus 11 ~~~~~~~vlVtGatGfiG~~lv~~L~-~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~ 89 (348)
T PRK15181 11 LVLAPKRWLITGVAGFIGSGLLEELL-FLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK 89 (348)
T ss_pred ccccCCEEEEECCccHHHHHHHHHHH-HCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh
Confidence 34456899999999999999999999 67999999998653211 001357889999999999999999
Q ss_pred ccCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCC
Q 042242 92 LLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRV 171 (303)
Q Consensus 92 ~~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~ 171 (303)
++|.|+|+|+......+..++.+.+++|+.++.+++++|++.+ +.++++.|+..+|+... ..+..|+++..
T Consensus 90 ~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~--~~~~v~~SS~~vyg~~~-------~~~~~e~~~~~ 160 (348)
T PRK15181 90 NVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH--VSSFTYAASSSTYGDHP-------DLPKIEERIGR 160 (348)
T ss_pred CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEeechHhhCCCC-------CCCCCCCCCCC
Confidence 9999999988654444444455689999999999999999862 44666666666775432 34456666655
Q ss_pred CCCccchHHHHHHHHHH-----hcCC-cceEEecCCceeecCCCCcc---chhhHHHHHHHHhhhCCCceeeCCchhhhh
Q 042242 172 SKSNNFYYVLEDLLKEK-----LAGK-VAWSVHRPGLLLGSSHRSLY---NFLGCLCVYGAVCKHLNLPFVFGGTREIWE 242 (303)
Q Consensus 172 p~~~~~~y~~~k~~~e~-----~~~~-~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 242 (303)
|.++ |+.+|...|. .... ++++++||+++||++..... .++..+. ..+.. +.++...|+.
T Consensus 161 p~~~---Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~--~~~~~--~~~i~~~g~g---- 229 (348)
T PRK15181 161 PLSP---YAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWI--LSLLK--DEPIYINGDG---- 229 (348)
T ss_pred CCCh---hhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHH--HHHHc--CCCcEEeCCC----
Confidence 6666 9988887773 2222 99999999999997643221 1112211 11222 4454544433
Q ss_pred hhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcc
Q 042242 243 EYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGV 298 (303)
Q Consensus 243 ~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~ 298 (303)
.+..++++++|+|++++.++..+... ..+++|||++++.+|++|+++.+.+.++.
T Consensus 230 ~~~rd~i~v~D~a~a~~~~~~~~~~~-~~~~~yni~~g~~~s~~e~~~~i~~~~~~ 284 (348)
T PRK15181 230 STSRDFCYIENVIQANLLSATTNDLA-SKNKVYNVAVGDRTSLNELYYLIRDGLNL 284 (348)
T ss_pred CceEeeEEHHHHHHHHHHHHhccccc-CCCCEEEecCCCcEeHHHHHHHHHHHhCc
Confidence 45568999999999988877543211 12479999999999999999999998874
No 3
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.98 E-value=9.5e-31 Score=212.81 Aligned_cols=251 Identities=16% Similarity=0.101 Sum_probs=190.4
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcC-CCeEEEEecCCcc-----c-c-ccCCCeEEEEecCCCHHHHHHHHhc--cCceeE
Q 042242 29 NVAVIFGVTGLVGKELARRLISTA-NWKVYGIARKPEI-----T-A-IQSSSYCFISCDLLNPLDIKRKLTL--LEDVTH 98 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~-----~-~-~~~~~~~~~~~D~~~~~~l~~~~~~--~~~V~~ 98 (303)
+++|||||+||||++++++++.+. .++|+.++.-.-. . . ...+++.++++|++|.+.+.++++. .|.|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 579999999999999999999433 3558888863211 1 1 2346899999999999999999996 567999
Q ss_pred EeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccch
Q 042242 99 IFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFY 178 (303)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~ 178 (303)
.|+-++.+.+-..+..++++|+.|+.+||+++++.... .++..+|+..+||+... ....++|++|..|++|
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~-frf~HISTDEVYG~l~~-----~~~~FtE~tp~~PsSP--- 151 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK-FRFHHISTDEVYGDLGL-----DDDAFTETTPYNPSSP--- 151 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhccc-ceEEEeccccccccccC-----CCCCcccCCCCCCCCC---
Confidence 99999999988888889999999999999999998542 23333444557755432 2336899999999999
Q ss_pred HHHHHHHHH-----HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHH
Q 042242 179 YVLEDLLKE-----KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSR 252 (303)
Q Consensus 179 y~~~k~~~e-----~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 252 (303)
|+.+|.... +.+.. ++++|.|+++-||| ..... ++-....+..-.++++.+.|++ .+..++.+++
T Consensus 152 YSASKAasD~lVray~~TYglp~~ItrcSNNYGP--yqfpE---KlIP~~I~nal~g~~lpvYGdG----~~iRDWl~Ve 222 (340)
T COG1088 152 YSASKAASDLLVRAYVRTYGLPATITRCSNNYGP--YQFPE---KLIPLMIINALLGKPLPVYGDG----LQIRDWLYVE 222 (340)
T ss_pred cchhhhhHHHHHHHHHHHcCCceEEecCCCCcCC--CcCch---hhhHHHHHHHHcCCCCceecCC----cceeeeEEeH
Confidence 888777655 22323 99999999999995 43222 2222222222336666666666 5677888888
Q ss_pred HHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 253 LVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 253 d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
|-++++-.++..... |++|||+++...+..|+++.|.+.+|++.+
T Consensus 223 Dh~~ai~~Vl~kg~~----GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~ 267 (340)
T COG1088 223 DHCRAIDLVLTKGKI----GETYNIGGGNERTNLEVVKTICELLGKDKP 267 (340)
T ss_pred hHHHHHHHHHhcCcC----CceEEeCCCccchHHHHHHHHHHHhCcccc
Confidence 889988888777643 599999999999999999999999998776
No 4
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.98 E-value=2.2e-30 Score=220.01 Aligned_cols=251 Identities=20% Similarity=0.205 Sum_probs=174.5
Q ss_pred EEEcCCChhHHHHHHHHhhcCC--CeEEEEecCCcccc---ccCCC-eEEEEecCCCHHHHHHHHhccCceeEEeecccc
Q 042242 32 VIFGVTGLVGKELARRLISTAN--WKVYGIARKPEITA---IQSSS-YCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWA 105 (303)
Q Consensus 32 lVtGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~---~~~~~-~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~ 105 (303)
|||||+||||++|+++|+ +.| ++|++++|.+.... ....+ .+++++|++|.+++.++++++|.|+|+|.....
T Consensus 1 LVTGgsGflG~~iv~~Ll-~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~ 79 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLL-ERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPP 79 (280)
T ss_pred CEEcCCcHHHHHHHHHHH-HCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCccccc
Confidence 699999999999999999 577 78999998776533 12223 348999999999999999999999999876433
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHH
Q 042242 106 SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLL 185 (303)
Q Consensus 106 ~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~ 185 (303)
.. .....+.+++|+.|+.+++++|++. .+++++++|+..++..... +. .....+|+.+.. ..+...|+.+|.+
T Consensus 80 ~~-~~~~~~~~~vNV~GT~nvl~aa~~~--~VkrlVytSS~~vv~~~~~--~~-~~~~~dE~~~~~-~~~~~~Y~~SK~~ 152 (280)
T PF01073_consen 80 WG-DYPPEEYYKVNVDGTRNVLEAARKA--GVKRLVYTSSISVVFDNYK--GD-PIINGDEDTPYP-SSPLDPYAESKAL 152 (280)
T ss_pred cC-cccHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcCcceeEeccC--CC-CcccCCcCCccc-ccccCchHHHHHH
Confidence 32 2223348999999999999999986 4566666666556543111 00 011124544432 2233449998888
Q ss_pred HHH----hcC------C-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHH
Q 042242 186 KEK----LAG------K-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLV 254 (303)
Q Consensus 186 ~e~----~~~------~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 254 (303)
+|. +.+ . +.++++||+.|||++.....+.+... ... +......|.. ....++++++++
T Consensus 153 AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~-----~~~--g~~~~~~g~~----~~~~~~vyV~Nv 221 (280)
T PF01073_consen 153 AEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKM-----VRS--GLFLFQIGDG----NNLFDFVYVENV 221 (280)
T ss_pred HHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHH-----HHh--cccceeecCC----CceECcEeHHHH
Confidence 883 122 3 89999999999997654332222221 111 2122222222 566789999999
Q ss_pred HHHHHHHhc---Cc-CCcCCCCceEEeecCCCcc-HHhhHHHHHHHhcccCC
Q 042242 255 AEQHIWVAT---ND-DISSTKGQAFNAINGPRFT-WKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 255 a~a~~~~~~---~~-~~~~~~g~~yni~~~~~~s-~~e~~~~i~~~~g~~~~ 301 (303)
|.+++.++. .+ ......|+.|+|++++++. +.|++..+.+.+|.+.|
T Consensus 222 A~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~ 273 (280)
T PF01073_consen 222 AHAHVLAAQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPP 273 (280)
T ss_pred HHHHHHHHHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCC
Confidence 999988754 22 0111457999999999999 99999999999999987
No 5
>PLN02427 UDP-apiose/xylose synthase
Probab=99.97 E-value=1.9e-29 Score=225.29 Aligned_cols=260 Identities=12% Similarity=0.101 Sum_probs=172.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc--------cCCCeEEEEecCCCHHHHHHHHhccCceeE
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI--------QSSSYCFISCDLLNPLDIKRKLTLLEDVTH 98 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~ 98 (303)
+.|+|||||||||||++|+++|++.+|++|++++|+..+... ...+++++.+|+.|.+.+.++++++|.|||
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~ViH 92 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTIN 92 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEEE
Confidence 446899999999999999999994336999999987543211 124689999999999999999999999999
Q ss_pred EeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCc---------CcCCC
Q 042242 99 IFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFY---------DEECP 169 (303)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~---------~e~~~ 169 (303)
+|+.........++.+.+..|+.++.+++++|++.++ ++++.|+..+|+.....+-. ...|. .|+.+
T Consensus 93 lAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~~---r~v~~SS~~vYg~~~~~~~~-e~~p~~~~~~~~~~~e~~~ 168 (386)
T PLN02427 93 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNK---RLIHFSTCEVYGKTIGSFLP-KDHPLRQDPAFYVLKEDES 168 (386)
T ss_pred cccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcCC---EEEEEeeeeeeCCCcCCCCC-ccccccccccccccccccc
Confidence 9875433222233334678899999999999987653 45555555578643211100 01111 12211
Q ss_pred CC---C-CCccchHHHHHHHHHH-----hcCC-cceEEecCCceeecCCCCc------cchhhH-HHHHHH-HhhhCCCc
Q 042242 170 RV---S-KSNNFYYVLEDLLKEK-----LAGK-VAWSVHRPGLLLGSSHRSL------YNFLGC-LCVYGA-VCKHLNLP 231 (303)
Q Consensus 170 ~~---p-~~~~~~y~~~k~~~e~-----~~~~-~~~~ilRp~~v~G~~~~~~------~~~~~~-~~~~~~-~~~~~~~~ 231 (303)
.. | ..|.+.|+.+|.+.|. .... ++++++||++|||++.... ...... +..+.. +. .+.+
T Consensus 169 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~ 246 (386)
T PLN02427 169 PCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL--RREP 246 (386)
T ss_pred ccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHh--cCCC
Confidence 10 0 1122348988887772 2222 9999999999999753210 001111 111111 22 2445
Q ss_pred eeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC-CCccHHhhHHHHHHHhcc
Q 042242 232 FVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING-PRFTWKEIWPSIGKKFGV 298 (303)
Q Consensus 232 ~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~-~~~s~~e~~~~i~~~~g~ 298 (303)
+.+.|+. .+..++++++|+|++++.++.++... .+++||++++ +.+|+.|+++.+.+.+|.
T Consensus 247 ~~~~g~g----~~~r~~i~V~Dva~ai~~al~~~~~~--~g~~yni~~~~~~~s~~el~~~i~~~~g~ 308 (386)
T PLN02427 247 LKLVDGG----QSQRTFVYIKDAIEAVLLMIENPARA--NGHIFNVGNPNNEVTVRQLAEMMTEVYAK 308 (386)
T ss_pred eEEECCC----CceECcEeHHHHHHHHHHHHhCcccc--cCceEEeCCCCCCccHHHHHHHHHHHhcc
Confidence 4444433 45568999999999999988765321 2479999997 589999999999999885
No 6
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.97 E-value=2.2e-29 Score=221.89 Aligned_cols=254 Identities=15% Similarity=0.238 Sum_probs=174.4
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--ccCCCeEEEEecCC-CHHHHHHHHhccCceeEEeecccc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--IQSSSYCFISCDLL-NPLDIKRKLTLLEDVTHIFWVTWA 105 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~D~~-~~~~l~~~~~~~~~V~~~~~~~~~ 105 (303)
|+|||||||||||++|+++|++..||+|++++|+..+.. ...++++++.+|+. +.+.+.++++++|.|+|+++....
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~~~ 81 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVAIATP 81 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccCCh
Confidence 589999999999999999998445799999998754322 12346889999997 777888889999999999876543
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCC---C-CCccchHHH
Q 042242 106 SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRV---S-KSNNFYYVL 181 (303)
Q Consensus 106 ~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~---p-~~~~~~y~~ 181 (303)
.....++...+++|+.++.+++++|++.. .++++.|+..+|+... ..++.|+++.. | ..|.+.|+.
T Consensus 82 ~~~~~~p~~~~~~n~~~~~~ll~aa~~~~---~~~v~~SS~~vyg~~~-------~~~~~ee~~~~~~~~~~~p~~~Y~~ 151 (347)
T PRK11908 82 ATYVKQPLRVFELDFEANLPIVRSAVKYG---KHLVFPSTSEVYGMCP-------DEEFDPEASPLVYGPINKPRWIYAC 151 (347)
T ss_pred HHhhcCcHHHHHHHHHHHHHHHHHHHhcC---CeEEEEecceeeccCC-------CcCcCccccccccCcCCCccchHHH
Confidence 33334444578999999999999999764 3555555555775431 22455554321 1 123344999
Q ss_pred HHHHHHH-----hcCC-cceEEecCCceeecCCCCcc---c-hhhHHHH-HHHHhhhCCCceeeCCchhhhhhhcccCcc
Q 042242 182 EDLLKEK-----LAGK-VAWSVHRPGLLLGSSHRSLY---N-FLGCLCV-YGAVCKHLNLPFVFGGTREIWEEYCLDGSD 250 (303)
Q Consensus 182 ~k~~~e~-----~~~~-~~~~ilRp~~v~G~~~~~~~---~-~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 250 (303)
+|...|. .... ++++++||+.+||++..... . ....+.. ...+.. +.++.+.+.. .+..++++
T Consensus 152 sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~g----~~~r~~i~ 225 (347)
T PRK11908 152 SKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVR--GEPISLVDGG----SQKRAFTD 225 (347)
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhC--CCceEEecCC----ceeecccc
Confidence 8887762 2222 99999999999997643110 0 0001111 111222 4454444332 45568999
Q ss_pred HHHHHHHHHHHhcCcCCcCCCCceEEeecC-CCccHHhhHHHHHHHhccc
Q 042242 251 SRLVAEQHIWVATNDDISSTKGQAFNAING-PRFTWKEIWPSIGKKFGVK 299 (303)
Q Consensus 251 ~~d~a~a~~~~~~~~~~~~~~g~~yni~~~-~~~s~~e~~~~i~~~~g~~ 299 (303)
++|+|++++.++..+... ..|++||++++ ..+|++|+++.|.+.+|..
T Consensus 226 v~D~a~a~~~~~~~~~~~-~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~ 274 (347)
T PRK11908 226 IDDGIDALMKIIENKDGV-ASGKIYNIGNPKNNHSVRELANKMLELAAEY 274 (347)
T ss_pred HHHHHHHHHHHHhCcccc-CCCCeEEeCCCCCCcCHHHHHHHHHHHhcCc
Confidence 999999999988775320 12479999987 4799999999999999853
No 7
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.97 E-value=7.5e-29 Score=218.19 Aligned_cols=247 Identities=14% Similarity=0.095 Sum_probs=177.8
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc---ccc----------CCCeEEEEecCCCHHHHHHHHhcc--
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT---AIQ----------SSSYCFISCDLLNPLDIKRKLTLL-- 93 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~---~~~----------~~~~~~~~~D~~~~~~l~~~~~~~-- 93 (303)
|+||||||+||||++|+++|+ ..|++|++++|++... ... ..+++++.+|++|.+.+.++++++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~ 79 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLL-EKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKP 79 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHH-HCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCC
Confidence 589999999999999999999 6899999999976421 000 235889999999999999999965
Q ss_pred CceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhcc-CCccEEEEeecccccccccCCCcccccCCcCcCCCCCC
Q 042242 94 EDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRA-KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVS 172 (303)
Q Consensus 94 ~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p 172 (303)
|.|+|+|+......+...+...+++|+.++.+++++|++.+ .+..++++.|+..+|+... ..+..|+.+..|
T Consensus 80 d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~-------~~~~~E~~~~~p 152 (343)
T TIGR01472 80 TEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQ-------EIPQNETTPFYP 152 (343)
T ss_pred CEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCC-------CCCCCCCCCCCC
Confidence 67999987654433333344577889999999999999863 2234666666666786432 335778887777
Q ss_pred CCccchHHHHHHHHHH-----hcCC-cceEEecCCceeecCCCCccchhh-HHHHHH-HHhhhCCC-ceeeCCchhhhhh
Q 042242 173 KSNNFYYVLEDLLKEK-----LAGK-VAWSVHRPGLLLGSSHRSLYNFLG-CLCVYG-AVCKHLNL-PFVFGGTREIWEE 243 (303)
Q Consensus 173 ~~~~~~y~~~k~~~e~-----~~~~-~~~~ilRp~~v~G~~~~~~~~~~~-~~~~~~-~~~~~~~~-~~~~~g~~~~~~~ 243 (303)
.++ |+.+|...|. .+.. +++++.|+.++||++... ++.. .+.... .+.. +. +..+.|+. .
T Consensus 153 ~~~---Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~g~g----~ 221 (343)
T TIGR01472 153 RSP---YAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGE--NFVTRKITRAAAKIKL--GLQEKLYLGNL----D 221 (343)
T ss_pred CCh---hHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCc--cccchHHHHHHHHHHc--CCCCceeeCCC----c
Confidence 777 9998888772 2222 788899999999975332 1111 111111 1222 22 22333433 4
Q ss_pred hcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhccc
Q 042242 244 YCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVK 299 (303)
Q Consensus 244 ~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~ 299 (303)
+..++++++|+|++++.++..+. + +.|||++++.+|++|+++.+++.+|++
T Consensus 222 ~~rd~i~V~D~a~a~~~~~~~~~--~---~~yni~~g~~~s~~e~~~~i~~~~g~~ 272 (343)
T TIGR01472 222 AKRDWGHAKDYVEAMWLMLQQDK--P---DDYVIATGETHSVREFVEVSFEYIGKT 272 (343)
T ss_pred cccCceeHHHHHHHHHHHHhcCC--C---ccEEecCCCceeHHHHHHHHHHHcCCC
Confidence 56788999999999998887642 1 579999999999999999999999965
No 8
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.97 E-value=9e-29 Score=218.77 Aligned_cols=249 Identities=16% Similarity=0.116 Sum_probs=173.9
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEE-EEecCCcccc---c----cCCCeEEEEecCCCHHHHHHHHhc--cCceeE
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVY-GIARKPEITA---I----QSSSYCFISCDLLNPLDIKRKLTL--LEDVTH 98 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~-~~~r~~~~~~---~----~~~~~~~~~~D~~~~~~l~~~~~~--~~~V~~ 98 (303)
++|||||||||||+++++.|+ +.|++|+ +++|...... . ...+++++.+|+.|.+++.+++++ +|.|+|
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih 80 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYII-NETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH 80 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHH-HcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence 689999999999999999999 6788755 4444322111 0 123577889999999999999985 677999
Q ss_pred EeecccccCChHHHHHHHHHHHHHHHHHHHHHhhc-------cCCccEEEEeecccccccccCCCcccccCCcCcCCCCC
Q 042242 99 IFWVTWASQFASDMHKCCEQNKAMMCNALNAILPR-------AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRV 171 (303)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-------~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~ 171 (303)
+++......+...+.+.+++|+.++.+++++|.+. .....+++.+|+..+|+.... ...+++|+.+..
T Consensus 81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~-----~~~~~~E~~~~~ 155 (355)
T PRK10217 81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHS-----TDDFFTETTPYA 155 (355)
T ss_pred CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCC-----CCCCcCCCCCCC
Confidence 98765443333444568999999999999999863 123456666666667753211 134577887766
Q ss_pred CCCccchHHHHHHHHH-----HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhc
Q 042242 172 SKSNNFYYVLEDLLKE-----KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYC 245 (303)
Q Consensus 172 p~~~~~~y~~~k~~~e-----~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 245 (303)
|.++ |+.+|...| +.+.. ++++++||+++||++.. ...+...+ ...... +.++.+.|++ .+.
T Consensus 156 p~s~---Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~-~~~~~~~~--~~~~~~--~~~~~~~g~g----~~~ 223 (355)
T PRK10217 156 PSSP---YSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHF-PEKLIPLM--ILNALA--GKPLPVYGNG----QQI 223 (355)
T ss_pred CCCh---hHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCC-cccHHHHH--HHHHhc--CCCceEeCCC----Cee
Confidence 6666 898888766 22222 89999999999997542 11111111 111222 3444444433 456
Q ss_pred ccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhccc
Q 042242 246 LDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVK 299 (303)
Q Consensus 246 ~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~ 299 (303)
.+++|++|+|++++.++..+. . +++||+++++.+|++|+++.+++.+|+.
T Consensus 224 ~~~i~v~D~a~a~~~~~~~~~-~---~~~yni~~~~~~s~~~~~~~i~~~~~~~ 273 (355)
T PRK10217 224 RDWLYVEDHARALYCVATTGK-V---GETYNIGGHNERKNLDVVETICELLEEL 273 (355)
T ss_pred eCcCcHHHHHHHHHHHHhcCC-C---CCeEEeCCCCcccHHHHHHHHHHHhccc
Confidence 789999999999988887642 2 3799999999999999999999999853
No 9
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.97 E-value=1.3e-28 Score=233.12 Aligned_cols=257 Identities=15% Similarity=0.215 Sum_probs=178.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--ccCCCeEEEEecCCCHHH-HHHHHhccCceeEEeecc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--IQSSSYCFISCDLLNPLD-IKRKLTLLEDVTHIFWVT 103 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~D~~~~~~-l~~~~~~~~~V~~~~~~~ 103 (303)
.+++|||||||||||++|+++|++..||+|++++|.+.... ...++++++.+|++|... +.++++++|.|+|+|+..
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa~~ 393 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIA 393 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECcccc
Confidence 46799999999999999999999435899999999765422 123468899999998655 577888999999998765
Q ss_pred cccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCC---CC-CccchH
Q 042242 104 WASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRV---SK-SNNFYY 179 (303)
Q Consensus 104 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~---p~-~~~~~y 179 (303)
........+.+.+++|+.++.+++++|++.+ .++++.|+..+|+... ..+++|+++.. |. .|.+.|
T Consensus 394 ~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~---~~~V~~SS~~vyg~~~-------~~~~~E~~~~~~~~p~~~p~s~Y 463 (660)
T PRK08125 394 TPIEYTRNPLRVFELDFEENLKIIRYCVKYN---KRIIFPSTSEVYGMCT-------DKYFDEDTSNLIVGPINKQRWIY 463 (660)
T ss_pred CchhhccCHHHHHHhhHHHHHHHHHHHHhcC---CeEEEEcchhhcCCCC-------CCCcCccccccccCCCCCCccch
Confidence 4433333444578999999999999999875 3566666666775431 33567776531 21 233349
Q ss_pred HHHHHHHHH-----hcCC-cceEEecCCceeecCCCCcc--ch--hhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCc
Q 042242 180 VLEDLLKEK-----LAGK-VAWSVHRPGLLLGSSHRSLY--NF--LGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGS 249 (303)
Q Consensus 180 ~~~k~~~e~-----~~~~-~~~~ilRp~~v~G~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 249 (303)
+.+|.+.|. .+.. ++++++||+++||++..... .. ...+..+.. ....+.++.+.|.. .+..+++
T Consensus 464 g~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~-~~~~~~~i~~~g~g----~~~rd~i 538 (660)
T PRK08125 464 SVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLIL-NLVEGSPIKLVDGG----KQKRCFT 538 (660)
T ss_pred HHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHH-HhcCCCCeEEeCCC----ceeecee
Confidence 998887772 2222 99999999999997643210 00 001111111 11124455444433 5667899
Q ss_pred cHHHHHHHHHHHhcCcCCcCCCCceEEeecCC-CccHHhhHHHHHHHhccc
Q 042242 250 DSRLVAEQHIWVATNDDISSTKGQAFNAINGP-RFTWKEIWPSIGKKFGVK 299 (303)
Q Consensus 250 ~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~-~~s~~e~~~~i~~~~g~~ 299 (303)
|++|+|++++.++..+... ..|++||+++++ .+|++|+++.+.+.+|.+
T Consensus 539 ~v~Dva~a~~~~l~~~~~~-~~g~iyni~~~~~~~s~~el~~~i~~~~g~~ 588 (660)
T PRK08125 539 DIRDGIEALFRIIENKDNR-CDGQIINIGNPDNEASIRELAEMLLASFEKH 588 (660)
T ss_pred eHHHHHHHHHHHHhccccc-cCCeEEEcCCCCCceeHHHHHHHHHHHhccC
Confidence 9999999999888764311 124799999986 799999999999999853
No 10
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.96 E-value=5.2e-28 Score=218.29 Aligned_cols=259 Identities=16% Similarity=0.085 Sum_probs=169.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCc---ccc---------------------ccCCCeEEEEecCCC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPE---ITA---------------------IQSSSYCFISCDLLN 82 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~---~~~---------------------~~~~~~~~~~~D~~~ 82 (303)
++++||||||+||||++|+++|+ ..|++|++++|... ... ....+++++.+|++|
T Consensus 46 ~~k~VLVTGatGfIGs~Lv~~L~-~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d 124 (442)
T PLN02572 46 KKKKVMVIGGDGYCGWATALHLS-KRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICD 124 (442)
T ss_pred cCCEEEEECCCcHHHHHHHHHHH-HCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCC
Confidence 56899999999999999999999 68999999875321 100 001358899999999
Q ss_pred HHHHHHHHhc--cCceeEEeecccccCCh---HHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCc
Q 042242 83 PLDIKRKLTL--LEDVTHIFWVTWASQFA---SDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPE 157 (303)
Q Consensus 83 ~~~l~~~~~~--~~~V~~~~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g 157 (303)
.+.+.+++++ +|.|+|+|+......+. .+....+++|+.++.+++++|++.+.+ .++++.|+..+|+......
T Consensus 125 ~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~-~~~V~~SS~~vYG~~~~~~- 202 (442)
T PLN02572 125 FEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPD-CHLVKLGTMGEYGTPNIDI- 202 (442)
T ss_pred HHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCC-ccEEEEecceecCCCCCCC-
Confidence 9999999986 57799997553322221 222345789999999999999987421 2455555556786431100
Q ss_pred ccccCCcC------cCC---CCCCCCccchHHHHHHHHH-----HhcCC-cceEEecCCceeecCCCCcc----------
Q 042242 158 EKQVRFYD------EEC---PRVSKSNNFYYVLEDLLKE-----KLAGK-VAWSVHRPGLLLGSSHRSLY---------- 212 (303)
Q Consensus 158 ~~~~~~~~------e~~---~~~p~~~~~~y~~~k~~~e-----~~~~~-~~~~ilRp~~v~G~~~~~~~---------- 212 (303)
.+.++. |++ +..|.++ |+.+|...| +.... ++++++||+++||++.....
T Consensus 203 --~E~~i~~~~~~~e~~~~~~~~P~s~---Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~ 277 (442)
T PLN02572 203 --EEGYITITHNGRTDTLPYPKQASSF---YHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLD 277 (442)
T ss_pred --cccccccccccccccccCCCCCCCc---chhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccC
Confidence 111111 232 3334445 999888776 22322 99999999999997643210
Q ss_pred ---chhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhH
Q 042242 213 ---NFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIW 289 (303)
Q Consensus 213 ---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~ 289 (303)
.+...+..+.. ....+.++.+.|.. .+..++++++|+|++++.++..+...+ ...+||+++ +.+|++|++
T Consensus 278 ~~~~~~~~i~~~~~-~~~~g~~i~v~g~G----~~~Rdfi~V~Dva~a~~~al~~~~~~g-~~~i~Nigs-~~~si~el~ 350 (442)
T PLN02572 278 YDGVFGTALNRFCV-QAAVGHPLTVYGKG----GQTRGFLDIRDTVRCIEIAIANPAKPG-EFRVFNQFT-EQFSVNELA 350 (442)
T ss_pred cccchhhHHHHHHH-HHhcCCCceecCCC----CEEECeEEHHHHHHHHHHHHhChhhcC-ceeEEEeCC-CceeHHHHH
Confidence 00011111111 11124555554433 456789999999999999887643221 114799976 679999999
Q ss_pred HHHHHH---hcccC
Q 042242 290 PSIGKK---FGVKV 300 (303)
Q Consensus 290 ~~i~~~---~g~~~ 300 (303)
+.+++. +|++.
T Consensus 351 ~~i~~~~~~~g~~~ 364 (442)
T PLN02572 351 KLVTKAGEKLGLDV 364 (442)
T ss_pred HHHHHHHHhhCCCC
Confidence 999999 88653
No 11
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.96 E-value=6.6e-28 Score=213.62 Aligned_cols=255 Identities=15% Similarity=0.036 Sum_probs=173.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCceeEEeecccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWA 105 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~ 105 (303)
.+|+|||||||||||++|++.|. +.||+|++++|...... ......+++.+|++|.+.+..+++++|.|+|+++....
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~-~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~~~~ 98 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLK-AEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAADMGG 98 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHH-hCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEcccccCC
Confidence 35799999999999999999999 68999999999754211 11123577889999999998889888989999764321
Q ss_pred c-CChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCC--CCCCCCccchHHHH
Q 042242 106 S-QFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC--PRVSKSNNFYYVLE 182 (303)
Q Consensus 106 ~-~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~--~~~p~~~~~~y~~~ 182 (303)
. .....+...+..|+.++.+++++|++.. ..++++.|+..+|+...... ...++.|++ +..|.++ |+.+
T Consensus 99 ~~~~~~~~~~~~~~N~~~t~nll~aa~~~~--vk~~V~~SS~~vYg~~~~~~---~~~~~~E~~~~p~~p~s~---Yg~s 170 (370)
T PLN02695 99 MGFIQSNHSVIMYNNTMISFNMLEAARING--VKRFFYASSACIYPEFKQLE---TNVSLKESDAWPAEPQDA---YGLE 170 (370)
T ss_pred ccccccCchhhHHHHHHHHHHHHHHHHHhC--CCEEEEeCchhhcCCccccC---cCCCcCcccCCCCCCCCH---HHHH
Confidence 1 1111122357889999999999998763 44666666666785432100 122456654 4444455 8988
Q ss_pred HHHHHH-----hcCC-cceEEecCCceeecCCCCcc--chhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHH
Q 042242 183 DLLKEK-----LAGK-VAWSVHRPGLLLGSSHRSLY--NFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLV 254 (303)
Q Consensus 183 k~~~e~-----~~~~-~~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 254 (303)
|...|. .... ++++++||+++||++..... ...........+. .+.++.+.+.. .+..++++++|+
T Consensus 171 K~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~g~g----~~~r~~i~v~D~ 244 (370)
T PLN02695 171 KLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALT--STDEFEMWGDG----KQTRSFTFIDEC 244 (370)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHc--CCCCeEEeCCC----CeEEeEEeHHHH
Confidence 887772 2222 99999999999997543211 1111111111121 13445554443 455678899999
Q ss_pred HHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 255 AEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 255 a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
++++++++..+. +++||+++++.+|++|+++.+.+.+|.+.+
T Consensus 245 a~ai~~~~~~~~-----~~~~nv~~~~~~s~~el~~~i~~~~g~~~~ 286 (370)
T PLN02695 245 VEGVLRLTKSDF-----REPVNIGSDEMVSMNEMAEIALSFENKKLP 286 (370)
T ss_pred HHHHHHHHhccC-----CCceEecCCCceeHHHHHHHHHHHhCCCCC
Confidence 999988766531 268999999999999999999999997544
No 12
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.96 E-value=2.4e-28 Score=219.55 Aligned_cols=241 Identities=16% Similarity=0.095 Sum_probs=168.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc------ccCCCeEEEEecCCCHHHHHHHHhccCceeEEee
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA------IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
.+||||||||||||++|+++|+ +.|++|++++|...... ...++++++.+|+.+. .+.++|.|+|+|+
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll-~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~-----~~~~~D~ViHlAa 193 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLI-GRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP-----ILLEVDQIYHLAC 193 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHH-HCCCEEEEEeCCCCccHhHhhhhccCCceEEEECccccc-----cccCCCEEEECce
Confidence 4689999999999999999999 68999999998532211 1124677888888764 3567888999987
Q ss_pred cccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCC-----CCCCCCcc
Q 042242 102 VTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC-----PRVSKSNN 176 (303)
Q Consensus 102 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~-----~~~p~~~~ 176 (303)
.........++.+.+++|+.++.+++++|++.+. ++++.|+..+|+... ..+.+|+. |..|.++
T Consensus 194 ~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~---r~V~~SS~~VYg~~~-------~~p~~E~~~~~~~p~~p~s~- 262 (436)
T PLN02166 194 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA---RFLLTSTSEVYGDPL-------EHPQKETYWGNVNPIGERSC- 262 (436)
T ss_pred eccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC---EEEEECcHHHhCCCC-------CCCCCccccccCCCCCCCCc-
Confidence 6443333334556899999999999999998753 566666666886432 23455552 3333444
Q ss_pred chHHHHHHHHHH-----hcCC-cceEEecCCceeecCCCCccchhhHHHHHH-HHhhhCCCceeeCCchhhhhhhcccCc
Q 042242 177 FYYVLEDLLKEK-----LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYG-AVCKHLNLPFVFGGTREIWEEYCLDGS 249 (303)
Q Consensus 177 ~~y~~~k~~~e~-----~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~ 249 (303)
|+.+|...|. .+.. ++++++||+++||++....... .+..+. .+.+ +.++.+.|+. .+..+++
T Consensus 263 --Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~--~i~~~i~~~l~--~~~i~v~g~g----~~~rdfi 332 (436)
T PLN02166 263 --YDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGR--VVSNFVAQTIR--KQPMTVYGDG----KQTRSFQ 332 (436)
T ss_pred --hHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccc--hHHHHHHHHhc--CCCcEEeCCC----CeEEeeE
Confidence 8888887773 2222 9999999999999754311111 111111 1222 4455555543 4556788
Q ss_pred cHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 250 DSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 250 ~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
+++|++++++.++.... +++||+++++.+|++|+++.|++.+|++.
T Consensus 333 ~V~Dva~ai~~~~~~~~-----~giyNIgs~~~~Si~ela~~I~~~~g~~~ 378 (436)
T PLN02166 333 YVSDLVDGLVALMEGEH-----VGPFNLGNPGEFTMLELAEVVKETIDSSA 378 (436)
T ss_pred EHHHHHHHHHHHHhcCC-----CceEEeCCCCcEeHHHHHHHHHHHhCCCC
Confidence 99999999998886432 25899999999999999999999999764
No 13
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.96 E-value=8.9e-28 Score=228.42 Aligned_cols=253 Identities=14% Similarity=0.099 Sum_probs=178.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhc-CCCeEEEEecCCccc--c-----ccCCCeEEEEecCCCHHHHHHHH--hccCce
Q 042242 27 AKNVAVIFGVTGLVGKELARRLIST-ANWKVYGIARKPEIT--A-----IQSSSYCFISCDLLNPLDIKRKL--TLLEDV 96 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~--~-----~~~~~~~~~~~D~~~~~~l~~~~--~~~~~V 96 (303)
++|+|||||||||||++|+++|++. .+++|++++|..... . ...++++++.+|+.|.+.+..++ .++|.|
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~V 84 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTI 84 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEE
Confidence 3579999999999999999999943 278999999853111 0 11347889999999998888776 457789
Q ss_pred eEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCcc
Q 042242 97 THIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNN 176 (303)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~ 176 (303)
+|+|+......+..++.+.++.|+.++.+++++|++.+ .+.+++++|+..+|+...... ..+..|+.+..|.++
T Consensus 85 iHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~vkr~I~~SS~~vyg~~~~~~----~~~~~E~~~~~p~~~- 158 (668)
T PLN02260 85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETDEDA----DVGNHEASQLLPTNP- 158 (668)
T ss_pred EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEcchHHhCCCcccc----ccCccccCCCCCCCC-
Confidence 99987654443333444578999999999999998763 345677777777886542100 112356666666666
Q ss_pred chHHHHHHHHHH-----hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCcc
Q 042242 177 FYYVLEDLLKEK-----LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSD 250 (303)
Q Consensus 177 ~~y~~~k~~~e~-----~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 250 (303)
|+.+|...|. .... ++++++||++|||++... ..++.. +.... ..+.++.+.|.. .+..++++
T Consensus 159 --Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~-~~~i~~---~~~~a-~~g~~i~i~g~g----~~~r~~ih 227 (668)
T PLN02260 159 --YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP-EKLIPK---FILLA-MQGKPLPIHGDG----SNVRSYLY 227 (668)
T ss_pred --cHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCc-ccHHHH---HHHHH-hCCCCeEEecCC----CceEeeEE
Confidence 8888777762 2222 999999999999975421 111111 11111 124455554443 45668899
Q ss_pred HHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 251 SRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 251 ~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
++|+|++++.++.... .+++||+++++.+|+.|+++.+++.+|++.
T Consensus 228 V~Dva~a~~~~l~~~~----~~~vyni~~~~~~s~~el~~~i~~~~g~~~ 273 (668)
T PLN02260 228 CEDVAEAFEVVLHKGE----VGHVYNIGTKKERRVIDVAKDICKLFGLDP 273 (668)
T ss_pred HHHHHHHHHHHHhcCC----CCCEEEECCCCeeEHHHHHHHHHHHhCCCC
Confidence 9999999988876542 237999999999999999999999999764
No 14
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.96 E-value=5.8e-28 Score=208.29 Aligned_cols=230 Identities=13% Similarity=0.039 Sum_probs=159.4
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhc--cCceeEEeeccccc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTL--LEDVTHIFWVTWAS 106 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~--~~~V~~~~~~~~~~ 106 (303)
|+||||||+||||++|+++|+ ..| +|++++|... .+.+|+.|.+.+.+++++ .|.|+|+|+.....
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~-~~g-~V~~~~~~~~----------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~ 68 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALA-PLG-NLIALDVHST----------DYCGDFSNPEGVAETVRKIRPDVIVNAAAHTAVD 68 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhh-ccC-CEEEeccccc----------cccCCCCCHHHHHHHHHhcCCCEEEECCccCCcc
Confidence 479999999999999999998 567 7999988642 235899999999999985 56799998776554
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHH
Q 042242 107 QFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLK 186 (303)
Q Consensus 107 ~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~ 186 (303)
.+..++...+++|+.++.+++++|+..+. ++++.|+..+|++. ...|+.|+++..|.++ |+.+|...
T Consensus 69 ~~~~~~~~~~~~N~~~~~~l~~aa~~~g~---~~v~~Ss~~Vy~~~-------~~~p~~E~~~~~P~~~---Yg~sK~~~ 135 (299)
T PRK09987 69 KAESEPEFAQLLNATSVEAIAKAANEVGA---WVVHYSTDYVFPGT-------GDIPWQETDATAPLNV---YGETKLAG 135 (299)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHHHHcCC---eEEEEccceEECCC-------CCCCcCCCCCCCCCCH---HHHHHHHH
Confidence 44444555789999999999999998754 45555555577554 2457889988777777 99999999
Q ss_pred HHhc-CC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcC
Q 042242 187 EKLA-GK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATN 264 (303)
Q Consensus 187 e~~~-~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~ 264 (303)
|..- .. .+++++||+++||++.. ++...+. ..+.+ +.++.+.+.... ........+++++.++..++..
T Consensus 136 E~~~~~~~~~~~ilR~~~vyGp~~~---~~~~~~~--~~~~~--~~~~~v~~d~~g--~~~~~~~~~d~~~~~~~~~~~~ 206 (299)
T PRK09987 136 EKALQEHCAKHLIFRTSWVYAGKGN---NFAKTML--RLAKE--REELSVINDQFG--APTGAELLADCTAHAIRVALNK 206 (299)
T ss_pred HHHHHHhCCCEEEEecceecCCCCC---CHHHHHH--HHHhc--CCCeEEeCCCcC--CCCCHHHHHHHHHHHHHHhhcc
Confidence 8532 21 57899999999997532 2221111 11222 344444442100 1111112345566666555543
Q ss_pred cCCcCCCCceEEeecCCCccHHhhHHHHHHHh
Q 042242 265 DDISSTKGQAFNAINGPRFTWKEIWPSIGKKF 296 (303)
Q Consensus 265 ~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~ 296 (303)
+.. +++||+++++.+|+.|+++.|.+..
T Consensus 207 ~~~----~giyni~~~~~~s~~e~~~~i~~~~ 234 (299)
T PRK09987 207 PEV----AGLYHLVASGTTTWHDYAALVFEEA 234 (299)
T ss_pred CCC----CCeEEeeCCCCccHHHHHHHHHHHH
Confidence 321 2599999999999999999997753
No 15
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.96 E-value=1.4e-27 Score=214.96 Aligned_cols=244 Identities=15% Similarity=0.065 Sum_probs=166.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc------ccCCCeEEEEecCCCHHHHHHHHhccCceeEEee
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA------IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
.++|||||||||||++|+++|+ +.|++|++++|...... ...++++++.+|+.+. .+.++|.|+|+|+
T Consensus 119 ~~kILVTGatGfIGs~Lv~~Ll-~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~-----~l~~~D~ViHlAa 192 (442)
T PLN02206 119 GLRVVVTGGAGFVGSHLVDRLM-ARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP-----ILLEVDQIYHLAC 192 (442)
T ss_pred CCEEEEECcccHHHHHHHHHHH-HCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccCh-----hhcCCCEEEEeee
Confidence 4799999999999999999999 68999999987532211 1234678888998774 3457888999987
Q ss_pred cccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCC--CCCCCccchH
Q 042242 102 VTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECP--RVSKSNNFYY 179 (303)
Q Consensus 102 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~--~~p~~~~~~y 179 (303)
.........++.+.++.|+.++.+++++|++.+. ++++.|+..+|+... ..+..|+.. ..|..+...|
T Consensus 193 ~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~---r~V~~SS~~VYg~~~-------~~p~~E~~~~~~~P~~~~s~Y 262 (442)
T PLN02206 193 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA---RFLLTSTSEVYGDPL-------QHPQVETYWGNVNPIGVRSCY 262 (442)
T ss_pred ecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC---EEEEECChHHhCCCC-------CCCCCccccccCCCCCccchH
Confidence 5433222234456889999999999999998743 566666666785432 234555431 1122222338
Q ss_pred HHHHHHHHH-----hcCC-cceEEecCCceeecCCCCcc-chhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHH
Q 042242 180 VLEDLLKEK-----LAGK-VAWSVHRPGLLLGSSHRSLY-NFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSR 252 (303)
Q Consensus 180 ~~~k~~~e~-----~~~~-~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 252 (303)
+.+|...|. .+.. ++++++||+++||++..... .....+ ...+.+ +.++.+.|.. .+..++++++
T Consensus 263 ~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~--i~~~l~--~~~i~i~g~G----~~~rdfi~V~ 334 (442)
T PLN02206 263 DEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNF--VAQALR--KEPLTVYGDG----KQTRSFQFVS 334 (442)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHH--HHHHHc--CCCcEEeCCC----CEEEeEEeHH
Confidence 888877763 2222 99999999999997532111 111111 111222 3454554543 4456788999
Q ss_pred HHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 253 LVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 253 d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
|+|++++.+++... +++||+++++.+|++|+++.+++.+|.+.
T Consensus 335 Dva~ai~~a~e~~~-----~g~yNIgs~~~~sl~Elae~i~~~~g~~~ 377 (442)
T PLN02206 335 DLVEGLMRLMEGEH-----VGPFNLGNPGEFTMLELAKVVQETIDPNA 377 (442)
T ss_pred HHHHHHHHHHhcCC-----CceEEEcCCCceeHHHHHHHHHHHhCCCC
Confidence 99999998886542 25899999999999999999999998643
No 16
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.96 E-value=4.2e-27 Score=206.86 Aligned_cols=249 Identities=14% Similarity=0.068 Sum_probs=177.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc---cc---------cCCCeEEEEecCCCHHHHHHHHhcc-
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT---AI---------QSSSYCFISCDLLNPLDIKRKLTLL- 93 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~---~~---------~~~~~~~~~~D~~~~~~l~~~~~~~- 93 (303)
++++||||||+||||++|+++|+ ..|++|++++|++... .. ...+++++.+|+.|.+.+.++++..
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 83 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLL-SKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIK 83 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHH-HCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcC
Confidence 45799999999999999999999 6899999999875421 00 0135788999999999999999864
Q ss_pred -CceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccC---CccEEEEeecccccccccCCCcccccCCcCcCCC
Q 042242 94 -EDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAK---ALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECP 169 (303)
Q Consensus 94 -~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~---~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~ 169 (303)
|.|+|+|+..........+...+++|+.++.++++++++... +++++++.|+..+|+.. ..+..|+.+
T Consensus 84 ~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~--------~~~~~E~~~ 155 (340)
T PLN02653 84 PDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGST--------PPPQSETTP 155 (340)
T ss_pred CCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCC--------CCCCCCCCC
Confidence 679999876443333334445779999999999999987632 23466666666677643 226788887
Q ss_pred CCCCCccchHHHHHHHHHH-----hcCC-cceEEecCCceeecCCCCccchhhH-HHHHH-HHhhhCCCceeeCCchhhh
Q 042242 170 RVSKSNNFYYVLEDLLKEK-----LAGK-VAWSVHRPGLLLGSSHRSLYNFLGC-LCVYG-AVCKHLNLPFVFGGTREIW 241 (303)
Q Consensus 170 ~~p~~~~~~y~~~k~~~e~-----~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~g~~~~~ 241 (303)
..|.++ |+.+|...|. .... +.++..|+.++||++.... ++.. +..+. .+..+...+ .+.|+.
T Consensus 156 ~~p~~~---Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~g~g--- 226 (340)
T PLN02653 156 FHPRSP---YAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGEN--FVTRKITRAVGRIKVGLQKK-LFLGNL--- 226 (340)
T ss_pred CCCCCh---hHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcc--cchhHHHHHHHHHHcCCCCc-eEeCCC---
Confidence 776666 9998887773 2222 6778899999999753321 2111 11111 122211222 333433
Q ss_pred hhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhccc
Q 042242 242 EEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVK 299 (303)
Q Consensus 242 ~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~ 299 (303)
.+..++++++|+|++++.++.... + +.||+++++.+|++|+++.+.+.+|.+
T Consensus 227 -~~~rd~i~v~D~a~a~~~~~~~~~--~---~~yni~~g~~~s~~e~~~~i~~~~g~~ 278 (340)
T PLN02653 227 -DASRDWGFAGDYVEAMWLMLQQEK--P---DDYVVATEESHTVEEFLEEAFGYVGLN 278 (340)
T ss_pred -cceecceeHHHHHHHHHHHHhcCC--C---CcEEecCCCceeHHHHHHHHHHHcCCC
Confidence 456788899999999999887642 2 579999999999999999999999964
No 17
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.96 E-value=3.6e-27 Score=204.99 Aligned_cols=249 Identities=20% Similarity=0.191 Sum_probs=177.4
Q ss_pred EEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhcc-CceeEEeecccccCC
Q 042242 30 VAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLL-EDVTHIFWVTWASQF 108 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-~~V~~~~~~~~~~~~ 108 (303)
+|||||||||||++|+++|+ +.||+|++++|...+......++.++.+|+.+.+.+...++.. |.|+|+++.......
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~~~ 80 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLL-AAGHDVRGLDRLRDGLDPLLSGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPDS 80 (314)
T ss_pred eEEEEcCcccHHHHHHHHHH-hCCCeEEEEeCCCccccccccccceeeecccchHHHHHHHhcCCCEEEEccccCchhhh
Confidence 49999999999999999999 6799999999987664432257889999999998888888888 789999877554443
Q ss_pred hH-HHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcC-CCCCCCCccchHHHHHHHH
Q 042242 109 AS-DMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEE-CPRVSKSNNFYYVLEDLLK 186 (303)
Q Consensus 109 ~~-~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~-~~~~p~~~~~~y~~~k~~~ 186 (303)
.. .+.+.++.|+.++.+++++|++. ...++++.|+..+|+... ...+..|+ .+..|.++ |+.+|...
T Consensus 81 ~~~~~~~~~~~nv~gt~~ll~aa~~~--~~~~~v~~ss~~~~~~~~------~~~~~~E~~~~~~p~~~---Yg~sK~~~ 149 (314)
T COG0451 81 NASDPAEFLDVNVDGTLNLLEAARAA--GVKRFVFASSVSVVYGDP------PPLPIDEDLGPPRPLNP---YGVSKLAA 149 (314)
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEeCCCceECCCC------CCCCcccccCCCCCCCH---HHHHHHHH
Confidence 33 23458999999999999999983 345555544444443331 13367777 45555555 88888877
Q ss_pred HH-----hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCc-eeeCCchhhhhhhcccCccHHHHHHHHH
Q 042242 187 EK-----LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLP-FVFGGTREIWEEYCLDGSDSRLVAEQHI 259 (303)
Q Consensus 187 e~-----~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~d~a~a~~ 259 (303)
|. .... ++++++||++|||++.....+..........+.+ +.+ ..+.+.. ....++++++|++++++
T Consensus 150 E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~----~~~~~~i~v~D~a~~~~ 223 (314)
T COG0451 150 EQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLK--GEPIIVIGGDG----SQTRDFVYVDDVADALL 223 (314)
T ss_pred HHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHh--CCCcceEeCCC----ceeEeeEeHHHHHHHHH
Confidence 72 3322 9999999999999765432111001111111222 333 3333322 34456888999999999
Q ss_pred HHhcCcCCcCCCCceEEeecCC-CccHHhhHHHHHHHhcccCC
Q 042242 260 WVATNDDISSTKGQAFNAINGP-RFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 260 ~~~~~~~~~~~~g~~yni~~~~-~~s~~e~~~~i~~~~g~~~~ 301 (303)
.++.++.. + .||++++. ..+++|+++.+++.+|.+.+
T Consensus 224 ~~~~~~~~----~-~~ni~~~~~~~~~~e~~~~~~~~~~~~~~ 261 (314)
T COG0451 224 LALENPDG----G-VFNIGSGTAEITVRELAEAVAEAVGSKAP 261 (314)
T ss_pred HHHhCCCC----c-EEEeCCCCCcEEHHHHHHHHHHHhCCCCc
Confidence 99988743 2 89999997 89999999999999998754
No 18
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.96 E-value=3.1e-27 Score=198.37 Aligned_cols=250 Identities=18% Similarity=0.184 Sum_probs=170.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------c--cCCCeEEEEecCCCHHHHHHHHhccCcee
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------I--QSSSYCFISCDLLNPLDIKRKLTLLEDVT 97 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~--~~~~~~~~~~D~~~~~~l~~~~~~~~~V~ 97 (303)
++++|+|||||||||++|+++|+ .+||.|+++.|++.+.. + ..++...+.+|+.|.+++.+++++||.||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL-~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVf 83 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLL-SRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVF 83 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHH-hCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEE
Confidence 46899999999999999999999 79999999999988631 1 13458899999999999999999999999
Q ss_pred EEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCC---
Q 042242 98 HIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKS--- 174 (303)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~--- 174 (303)
|+|......... .+.+.++..+.|+.+++++|++.. .++++++.|+...-.......+ ....++|+.=..+..
T Consensus 84 H~Asp~~~~~~~-~e~~li~pav~Gt~nVL~ac~~~~-sVkrvV~TSS~aAv~~~~~~~~--~~~vvdE~~wsd~~~~~~ 159 (327)
T KOG1502|consen 84 HTASPVDFDLED-PEKELIDPAVKGTKNVLEACKKTK-SVKRVVYTSSTAAVRYNGPNIG--ENSVVDEESWSDLDFCRC 159 (327)
T ss_pred EeCccCCCCCCC-cHHhhhhHHHHHHHHHHHHHhccC-CcceEEEeccHHHhccCCcCCC--CCcccccccCCcHHHHHh
Confidence 998765443333 233589999999999999999874 5666666664322211100011 122333433111111
Q ss_pred ccchHHHHHHHHHH-----hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccC
Q 042242 175 NNFYYVLEDLLKEK-----LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDG 248 (303)
Q Consensus 175 ~~~~y~~~k~~~e~-----~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 248 (303)
....|..+|.++|. +.+. ++.+.+-|+.|+||......+. .......+.+ |..-..+ ..+..+
T Consensus 160 ~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~--s~~~~l~~i~--G~~~~~~-------n~~~~~ 228 (327)
T KOG1502|consen 160 KKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNS--SLNALLKLIK--GLAETYP-------NFWLAF 228 (327)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccch--hHHHHHHHHh--cccccCC-------CCceee
Confidence 12358888888883 3333 9999999999999765432121 1222222222 2111111 233448
Q ss_pred ccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhc
Q 042242 249 SDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFG 297 (303)
Q Consensus 249 ~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g 297 (303)
+|++|+|.+++.+++.+... +.|.+.+. ..++.|+++.+.+.+.
T Consensus 229 VdVrDVA~AHv~a~E~~~a~----GRyic~~~-~~~~~ei~~~l~~~~P 272 (327)
T KOG1502|consen 229 VDVRDVALAHVLALEKPSAK----GRYICVGE-VVSIKEIADILRELFP 272 (327)
T ss_pred EeHHHHHHHHHHHHcCcccC----ceEEEecC-cccHHHHHHHHHHhCC
Confidence 99999999999999999775 47866665 4459999999988764
No 19
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.96 E-value=2.9e-27 Score=203.14 Aligned_cols=228 Identities=17% Similarity=0.131 Sum_probs=166.6
Q ss_pred EEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhcc--CceeEEeecccccC
Q 042242 30 VAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLL--EDVTHIFWVTWASQ 107 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~--~~V~~~~~~~~~~~ 107 (303)
+|||||||||||+++++.|+ +.||+|++++|. .+|+.+.+.+.++++++ |.|+|+++......
T Consensus 1 kilv~G~tG~iG~~l~~~l~-~~g~~v~~~~r~--------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 65 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLS-PEGRVVVALTSS--------------QLDLTDPEALERLLRAIRPDAVVNTAAYTDVDG 65 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHH-hcCCEEEEeCCc--------------ccCCCCHHHHHHHHHhCCCCEEEECCccccccc
Confidence 58999999999999999999 689999999986 37999999999999987 67999976543322
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHH
Q 042242 108 FASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE 187 (303)
Q Consensus 108 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e 187 (303)
....+...++.|+.++.++++++++... ++++.|+..+|++. ...+++|+++..|.++ |+.+|...|
T Consensus 66 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~v~~Ss~~vy~~~-------~~~~~~E~~~~~~~~~---Y~~~K~~~E 132 (287)
T TIGR01214 66 AESDPEKAFAVNALAPQNLARAAARHGA---RLVHISTDYVFDGE-------GKRPYREDDATNPLNV---YGQSKLAGE 132 (287)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHcCC---eEEEEeeeeeecCC-------CCCCCCCCCCCCCcch---hhHHHHHHH
Confidence 2223334789999999999999987643 44555555577442 2456888887665566 999888887
Q ss_pred Hh-cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCc
Q 042242 188 KL-AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATND 265 (303)
Q Consensus 188 ~~-~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~ 265 (303)
.. ... ++++++||+.+||++.. .++...+ ...+.. +.++...+ ..+.++++++|+|.++++++..+
T Consensus 133 ~~~~~~~~~~~ilR~~~v~G~~~~--~~~~~~~--~~~~~~--~~~~~~~~------~~~~~~v~v~Dva~a~~~~~~~~ 200 (287)
T TIGR01214 133 QAIRAAGPNALIVRTSWLYGGGGG--RNFVRTM--LRLAGR--GEELRVVD------DQIGSPTYAKDLARVIAALLQRL 200 (287)
T ss_pred HHHHHhCCCeEEEEeeecccCCCC--CCHHHHH--HHHhhc--CCCceEec------CCCcCCcCHHHHHHHHHHHHhhc
Confidence 42 222 89999999999997532 1221111 111111 23444444 23346788999999999988775
Q ss_pred CCcCCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 266 DISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 266 ~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
...+ ++||+++++.+|+.|+++.+++.+|++.
T Consensus 201 ~~~~---~~~ni~~~~~~s~~e~~~~i~~~~~~~~ 232 (287)
T TIGR01214 201 ARAR---GVYHLANSGQCSWYEFAQAIFEEAGADG 232 (287)
T ss_pred cCCC---CeEEEECCCCcCHHHHHHHHHHHhCccc
Confidence 3333 7999999999999999999999999764
No 20
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.96 E-value=6.5e-27 Score=206.30 Aligned_cols=250 Identities=16% Similarity=0.074 Sum_probs=174.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc------cCCCeEEEEecCCCHHHHHHHHhcc--CceeE
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI------QSSSYCFISCDLLNPLDIKRKLTLL--EDVTH 98 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~D~~~~~~l~~~~~~~--~~V~~ 98 (303)
++|+||||||+||||+++++.|+ +.|++|++++|++..... ...+++++.+|+.|.+++.++++.. |.|+|
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih 81 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLL-ELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFH 81 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHH-HCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEE
Confidence 45899999999999999999999 689999999997654220 1235778899999999999999875 66999
Q ss_pred EeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccch
Q 042242 99 IFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFY 178 (303)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~ 178 (303)
+++......+..++...+++|+.++.+++++++..+ ...+++++|+..+|+.... ..++.|+.+..|.++
T Consensus 82 ~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~iv~~SS~~vyg~~~~------~~~~~e~~~~~p~~~--- 151 (349)
T TIGR02622 82 LAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIG-SVKAVVNVTSDKCYRNDEW------VWGYRETDPLGGHDP--- 151 (349)
T ss_pred CCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcC-CCCEEEEEechhhhCCCCC------CCCCccCCCCCCCCc---
Confidence 987554444444555689999999999999998653 2346666666667754321 235677777666666
Q ss_pred HHHHHHHHH-----Hhc---------CCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhh
Q 042242 179 YVLEDLLKE-----KLA---------GKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEY 244 (303)
Q Consensus 179 y~~~k~~~e-----~~~---------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 244 (303)
|+.+|...| +.. + ++++++||+++||++......+... +..... .+.++.+++. .+
T Consensus 152 Y~~sK~~~e~~~~~~~~~~~~~~~~~~-i~~~~lR~~~vyGp~~~~~~~~~~~---~~~~~~-~g~~~~~~~g-----~~ 221 (349)
T TIGR02622 152 YSSSKACAELVIASYRSSFFGVANFHG-IKIASARAGNVIGGGDWAEDRLIPD---VIRAFS-SNKIVIIRNP-----DA 221 (349)
T ss_pred chhHHHHHHHHHHHHHHHhhcccccCC-CcEEEEccCcccCCCcchhhhhhHH---HHHHHh-cCCCeEECCC-----Cc
Confidence 888777665 111 4 8999999999999753221112121 111111 2445454432 45
Q ss_pred cccCccHHHHHHHHHHHhcCcCCc-CCCCceEEeecC--CCccHHhhHHHHHHHhc
Q 042242 245 CLDGSDSRLVAEQHIWVATNDDIS-STKGQAFNAING--PRFTWKEIWPSIGKKFG 297 (303)
Q Consensus 245 ~~~~~~~~d~a~a~~~~~~~~~~~-~~~g~~yni~~~--~~~s~~e~~~~i~~~~g 297 (303)
..++++++|+|.+++.++...... ...+++|||+++ +++|+.|+++.+.+.++
T Consensus 222 ~rd~i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~ 277 (349)
T TIGR02622 222 TRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWW 277 (349)
T ss_pred ccceeeHHHHHHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhc
Confidence 567889999999998876542100 011369999964 69999999999998765
No 21
>PLN02240 UDP-glucose 4-epimerase
Probab=99.96 E-value=1.1e-26 Score=205.18 Aligned_cols=263 Identities=16% Similarity=0.087 Sum_probs=177.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----------ccCCCeEEEEecCCCHHHHHHHHhc-
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----------IQSSSYCFISCDLLNPLDIKRKLTL- 92 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~~~D~~~~~~l~~~~~~- 92 (303)
++++++|+|||||||||++|+++|+ +.|++|++++|...... ....+++++.+|+.|.+.+..+++.
T Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~-~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~ 80 (352)
T PLN02240 2 SLMGRTILVTGGAGYIGSHTVLQLL-LAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST 80 (352)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC
Confidence 3456899999999999999999999 67999999987542210 0123678899999999999998874
Q ss_pred -cCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCC
Q 042242 93 -LEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRV 171 (303)
Q Consensus 93 -~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~ 171 (303)
+|.|+|+++..........+.+.++.|+.++.+++++|++.. ..+++++|+..+|+.. ...+++|+.+..
T Consensus 81 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~vyg~~-------~~~~~~E~~~~~ 151 (352)
T PLN02240 81 RFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG--CKKLVFSSSATVYGQP-------EEVPCTEEFPLS 151 (352)
T ss_pred CCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEccHHHhCCC-------CCCCCCCCCCCC
Confidence 567999976533222223344589999999999999998753 3455566555567543 244688888877
Q ss_pred CCCccchHHHHHHHHHH-----h-cCC-cceEEecCCceeecCCCCc-----cchhhHHHH-HHHHhhhCCCceeeCCch
Q 042242 172 SKSNNFYYVLEDLLKEK-----L-AGK-VAWSVHRPGLLLGSSHRSL-----YNFLGCLCV-YGAVCKHLNLPFVFGGTR 238 (303)
Q Consensus 172 p~~~~~~y~~~k~~~e~-----~-~~~-~~~~ilRp~~v~G~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~g~~ 238 (303)
|..+ |+.+|...|. . .+. ++++++|++++||+.+... ......+.. ...+..+...++...|..
T Consensus 152 ~~~~---Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 228 (352)
T PLN02240 152 ATNP---YGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGND 228 (352)
T ss_pred CCCH---HHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCC
Confidence 6666 8888777762 1 222 8899999999999643210 000011111 122222222223222210
Q ss_pred ---hhhhhhcccCccHHHHHHHHHHHhcCcC-CcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 239 ---EIWEEYCLDGSDSRLVAEQHIWVATNDD-ISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 239 ---~~~~~~~~~~~~~~d~a~a~~~~~~~~~-~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
... .+..++++++|+|++++.++.... .....+++||+++++.+|++|+++.+++.+|++.+
T Consensus 229 ~~~~~g-~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~ 294 (352)
T PLN02240 229 YPTKDG-TGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIP 294 (352)
T ss_pred CCCCCC-CEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCC
Confidence 001 566789999999999888775420 00022479999999999999999999999998765
No 22
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.96 E-value=5.1e-27 Score=207.33 Aligned_cols=255 Identities=15% Similarity=0.121 Sum_probs=172.3
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCe-EEEEecCCcc-c--cc----cCCCeEEEEecCCCHHHHHHHHhc--cCceeE
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWK-VYGIARKPEI-T--AI----QSSSYCFISCDLLNPLDIKRKLTL--LEDVTH 98 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~-~--~~----~~~~~~~~~~D~~~~~~l~~~~~~--~~~V~~ 98 (303)
++|||||||||||++|+++|+ +.|++ |++++|.... . .. ...+++++.+|++|.+++.++++. +|.|+|
T Consensus 1 mkilITGgtG~iG~~l~~~L~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 79 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHII-NNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMH 79 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHH-HhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence 379999999999999999999 56765 6666654311 0 00 123577889999999999999975 577999
Q ss_pred EeecccccCChHHHHHHHHHHHHHHHHHHHHHhhcc-------CCccEEEEeecccccccccC---CCcccccCCcCcCC
Q 042242 99 IFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRA-------KALKHVSLQTGMKHYVSLQG---LPEEKQVRFYDEEC 168 (303)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-------~~~~~~~~~s~~~~y~~~~~---~~g~~~~~~~~e~~ 168 (303)
+|+..........+.+.+++|+.++.+++++|++.. .+..+++++|+..+|+.... ..+.....++.|+.
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~ 159 (352)
T PRK10084 80 LAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETT 159 (352)
T ss_pred CCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccC
Confidence 987643332333345589999999999999998641 12345666666667754210 00000012467877
Q ss_pred CCCCCCccchHHHHHHHHHH-----hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhh
Q 042242 169 PRVSKSNNFYYVLEDLLKEK-----LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWE 242 (303)
Q Consensus 169 ~~~p~~~~~~y~~~k~~~e~-----~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 242 (303)
+..|.++ |+.+|...|. .... ++++++||+.+||++.... .++..+ ...+.. +.++.+.+..
T Consensus 160 ~~~p~~~---Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~-~~~~~~--~~~~~~--~~~~~~~~~g---- 227 (352)
T PRK10084 160 AYAPSSP---YSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPE-KLIPLV--ILNALE--GKPLPIYGKG---- 227 (352)
T ss_pred CCCCCCh---hHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCcc-chHHHH--HHHHhc--CCCeEEeCCC----
Confidence 7766666 8988887762 2222 8999999999999753211 111111 111222 3344443332
Q ss_pred hhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 243 EYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 243 ~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
.+..++++++|+|++++.++..+. . +++||+++++..|++|+++.+++.+|...
T Consensus 228 ~~~~~~v~v~D~a~a~~~~l~~~~-~---~~~yni~~~~~~s~~~~~~~i~~~~~~~~ 281 (352)
T PRK10084 228 DQIRDWLYVEDHARALYKVVTEGK-A---GETYNIGGHNEKKNLDVVLTICDLLDEIV 281 (352)
T ss_pred CeEEeeEEHHHHHHHHHHHHhcCC-C---CceEEeCCCCcCcHHHHHHHHHHHhcccc
Confidence 556788999999999988876542 2 37999999999999999999999998643
No 23
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.96 E-value=6.2e-27 Score=203.70 Aligned_cols=247 Identities=15% Similarity=0.111 Sum_probs=172.7
Q ss_pred EEEEEcCCChhHHHHHHHHhhcCC--CeEEEEecCCccc-----c--ccCCCeEEEEecCCCHHHHHHHHhc--cCceeE
Q 042242 30 VAVIFGVTGLVGKELARRLISTAN--WKVYGIARKPEIT-----A--IQSSSYCFISCDLLNPLDIKRKLTL--LEDVTH 98 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~-----~--~~~~~~~~~~~D~~~~~~l~~~~~~--~~~V~~ 98 (303)
+|+||||||+||++++++|++ .| ++|++++|..... . ...++++++.+|+.|.+++.+++++ +|.|+|
T Consensus 1 ~ilItGatG~iG~~l~~~l~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~ 79 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILN-EHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVH 79 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHH-hCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEE
Confidence 589999999999999999984 44 7899988743111 0 1123678899999999999999988 678999
Q ss_pred EeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccch
Q 042242 99 IFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFY 178 (303)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~ 178 (303)
+++..............+++|+.++.+++++|.+...+. +++++|+..+|+.... ..++.|+.+..|.++
T Consensus 80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~i~~Ss~~v~g~~~~------~~~~~e~~~~~~~~~--- 149 (317)
T TIGR01181 80 FAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEF-RFHHISTDEVYGDLEK------GDAFTETTPLAPSSP--- 149 (317)
T ss_pred cccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCc-eEEEeeccceeCCCCC------CCCcCCCCCCCCCCc---
Confidence 987654443334445578999999999999998753222 4556566557754321 225777777665555
Q ss_pred HHHHHHHHHH-----hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHH
Q 042242 179 YVLEDLLKEK-----LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSR 252 (303)
Q Consensus 179 y~~~k~~~e~-----~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 252 (303)
|+.+|...|. .... ++++++||+.+||+.... ..+...+. ..+.. +.++.+.++. .+..++++++
T Consensus 150 Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~-~~~~~~~~--~~~~~--~~~~~~~~~g----~~~~~~i~v~ 220 (317)
T TIGR01181 150 YSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFP-EKLIPLMI--TNALA--GKPLPVYGDG----QQVRDWLYVE 220 (317)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCc-ccHHHHHH--HHHhc--CCCceEeCCC----ceEEeeEEHH
Confidence 8887776662 2222 899999999999964321 12222111 11222 3333333332 4556789999
Q ss_pred HHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 253 LVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 253 d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
|+|+++..++... .. +++||+++++.+|++|+++.+.+.+|++.
T Consensus 221 D~a~~~~~~~~~~-~~---~~~~~~~~~~~~s~~~~~~~i~~~~~~~~ 264 (317)
T TIGR01181 221 DHCRAIYLVLEKG-RV---GETYNIGGGNERTNLEVVETILELLGKDE 264 (317)
T ss_pred HHHHHHHHHHcCC-CC---CceEEeCCCCceeHHHHHHHHHHHhCCCc
Confidence 9999998888654 22 37999999999999999999999999753
No 24
>PLN02214 cinnamoyl-CoA reductase
Probab=99.96 E-value=5.5e-27 Score=205.87 Aligned_cols=243 Identities=19% Similarity=0.193 Sum_probs=165.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc------cc--CCCeEEEEecCCCHHHHHHHHhccCceeE
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA------IQ--SSSYCFISCDLLNPLDIKRKLTLLEDVTH 98 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~------~~--~~~~~~~~~D~~~~~~l~~~~~~~~~V~~ 98 (303)
++++||||||+||||++|+++|+ +.||+|++++|+..... .. ..+++++.+|+.|.+.+.++++++|.|+|
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih 87 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILL-ERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH 87 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-HCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence 45799999999999999999999 68999999999765321 11 13578889999999999999999999999
Q ss_pred EeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecc-cccccccCCCcccccCCcCcCCCCC---CCC
Q 042242 99 IFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGM-KHYVSLQGLPEEKQVRFYDEECPRV---SKS 174 (303)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~-~~y~~~~~~~g~~~~~~~~e~~~~~---p~~ 174 (303)
+++... . .+.+.++.|+.++.+++++|++.+ +.++++.|+. .+|+...... ..+++|++... +..
T Consensus 88 ~A~~~~--~---~~~~~~~~nv~gt~~ll~aa~~~~--v~r~V~~SS~~avyg~~~~~~----~~~~~E~~~~~~~~~~~ 156 (342)
T PLN02214 88 TASPVT--D---DPEQMVEPAVNGAKFVINAAAEAK--VKRVVITSSIGAVYMDPNRDP----EAVVDESCWSDLDFCKN 156 (342)
T ss_pred ecCCCC--C---CHHHHHHHHHHHHHHHHHHHHhcC--CCEEEEeccceeeeccCCCCC----CcccCcccCCChhhccc
Confidence 987532 1 233478999999999999999763 3355555542 3665322100 12356664211 112
Q ss_pred ccchHHHHHHHHHH-----hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccC
Q 042242 175 NNFYYVLEDLLKEK-----LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDG 248 (303)
Q Consensus 175 ~~~~y~~~k~~~e~-----~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 248 (303)
|...|+.+|...|. .... ++++++||++|||++...... ..+.....+.. +.... .+ ....++
T Consensus 157 p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~--~~~~~~~~~~~--g~~~~-~~------~~~~~~ 225 (342)
T PLN02214 157 TKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTIN--ASLYHVLKYLT--GSAKT-YA------NLTQAY 225 (342)
T ss_pred cccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCC--chHHHHHHHHc--CCccc-CC------CCCcCe
Confidence 23338888877772 2222 999999999999976432111 11111111111 22222 22 223468
Q ss_pred ccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhc
Q 042242 249 SDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFG 297 (303)
Q Consensus 249 ~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g 297 (303)
+|++|+|++++.++..+.. ++.||+++ ...+++|+++.+++.++
T Consensus 226 i~V~Dva~a~~~al~~~~~----~g~yn~~~-~~~~~~el~~~i~~~~~ 269 (342)
T PLN02214 226 VDVRDVALAHVLVYEAPSA----SGRYLLAE-SARHRGEVVEILAKLFP 269 (342)
T ss_pred eEHHHHHHHHHHHHhCccc----CCcEEEec-CCCCHHHHHHHHHHHCC
Confidence 9999999999999887632 25899987 47899999999999985
No 25
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=99.95 E-value=6.4e-27 Score=202.99 Aligned_cols=239 Identities=14% Similarity=0.113 Sum_probs=157.2
Q ss_pred EEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHH---H-HHHHHh-----ccCceeEEee
Q 042242 31 AVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPL---D-IKRKLT-----LLEDVTHIFW 101 (303)
Q Consensus 31 vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~---~-l~~~~~-----~~~~V~~~~~ 101 (303)
|||||||||||++|+++|+ +.|++++++.|+...... ......+|+.|.. . +..+++ ++|.|+|+|+
T Consensus 2 ilVtGa~GfiG~~l~~~L~-~~g~~~v~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~ 77 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALN-DKGITDILVVDNLKDGTK---FVNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGA 77 (308)
T ss_pred EEEecCCcHHHHHHHHHHH-hCCCceEEEecCCCcchH---HHhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECce
Confidence 7999999999999999999 679987776665432110 1123345655543 3 233332 4677999987
Q ss_pred cccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHH
Q 042242 102 VTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVL 181 (303)
Q Consensus 102 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~ 181 (303)
....... +....++.|+.++.+++++|++.+. .+++.|+..+|+... ..+..|+.+..|.++ |+.
T Consensus 78 ~~~~~~~--~~~~~~~~n~~~t~~ll~~~~~~~~---~~i~~SS~~vyg~~~-------~~~~~E~~~~~p~~~---Y~~ 142 (308)
T PRK11150 78 CSSTTEW--DGKYMMDNNYQYSKELLHYCLEREI---PFLYASSAATYGGRT-------DDFIEEREYEKPLNV---YGY 142 (308)
T ss_pred ecCCcCC--ChHHHHHHHHHHHHHHHHHHHHcCC---cEEEEcchHHhCcCC-------CCCCccCCCCCCCCH---HHH
Confidence 5332221 2234789999999999999998643 356666666775431 234667766666666 898
Q ss_pred HHHHHH-----HhcCC-cceEEecCCceeecCCCCccchhhHHHHHH-HHhhhCCCceeeCCchhhhhhhcccCccHHHH
Q 042242 182 EDLLKE-----KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYG-AVCKHLNLPFVFGGTREIWEEYCLDGSDSRLV 254 (303)
Q Consensus 182 ~k~~~e-----~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 254 (303)
+|...| +.... ++++++||+++||++.............+. .+.++ ..+..++|+. ....++++++|+
T Consensus 143 sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~g~~----~~~r~~i~v~D~ 217 (308)
T PRK11150 143 SKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNG-ENPKLFEGSE----NFKRDFVYVGDV 217 (308)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcC-CCCEEecCCC----ceeeeeeeHHHH
Confidence 888766 22222 999999999999976432211111111111 12221 2233444433 345678999999
Q ss_pred HHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcc
Q 042242 255 AEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGV 298 (303)
Q Consensus 255 a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~ 298 (303)
|++++.++.... + ++||+++++.+|+.|+++.+.+.+|.
T Consensus 218 a~a~~~~~~~~~--~---~~yni~~~~~~s~~el~~~i~~~~~~ 256 (308)
T PRK11150 218 AAVNLWFWENGV--S---GIFNCGTGRAESFQAVADAVLAYHKK 256 (308)
T ss_pred HHHHHHHHhcCC--C---CeEEcCCCCceeHHHHHHHHHHHhCC
Confidence 999888876532 2 59999999999999999999999884
No 26
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.95 E-value=5.9e-27 Score=195.34 Aligned_cols=223 Identities=20% Similarity=0.199 Sum_probs=165.1
Q ss_pred EEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc--cCCCeEEEEecCCCHHHHHHHHhcc--CceeEEeeccccc
Q 042242 31 AVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI--QSSSYCFISCDLLNPLDIKRKLTLL--EDVTHIFWVTWAS 106 (303)
Q Consensus 31 vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~D~~~~~~l~~~~~~~--~~V~~~~~~~~~~ 106 (303)
|||||||||||++++++|+ +.|++|+.+.|++.+... ...+++++.+|+.|.+.+.++++.. |.|+|+++.....
T Consensus 1 IlI~GatG~iG~~l~~~l~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~ 79 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLL-KKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSNP 79 (236)
T ss_dssp EEEETTTSHHHHHHHHHHH-HTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSHH
T ss_pred EEEEccCCHHHHHHHHHHH-HcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeecccccc
Confidence 7999999999999999999 789999999998876532 1138899999999999999999988 7799997764322
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHH
Q 042242 107 QFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLK 186 (303)
Q Consensus 107 ~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~ 186 (303)
.......+.++.|+.++.+++++|++... .++++.++...|+.. ...+++|+++..|.++ |+.+|...
T Consensus 80 ~~~~~~~~~~~~n~~~~~~ll~~~~~~~~--~~~i~~sS~~~y~~~-------~~~~~~e~~~~~~~~~---Y~~~K~~~ 147 (236)
T PF01370_consen 80 ESFEDPEEIIEANVQGTRNLLEAAREAGV--KRFIFLSSASVYGDP-------DGEPIDEDSPINPLSP---YGASKRAA 147 (236)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHHHHHTT--SEEEEEEEGGGGTSS-------SSSSBETTSGCCHSSH---HHHHHHHH
T ss_pred ccccccccccccccccccccccccccccc--ccccccccccccccc-------cccccccccccccccc---cccccccc
Confidence 23344556889999999999999998743 566666666677555 2556788888766667 88877766
Q ss_pred H-----Hhc--CCcceEEecCCceeecCC-CC-ccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHH
Q 042242 187 E-----KLA--GKVAWSVHRPGLLLGSSH-RS-LYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQ 257 (303)
Q Consensus 187 e-----~~~--~~~~~~ilRp~~v~G~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a 257 (303)
| +.+ + ++++++||+.+||+.. .. ...+...+ ...+. .+.++.+++.. .+..++++++|+|++
T Consensus 148 e~~~~~~~~~~~-~~~~~~R~~~vyG~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~----~~~~~~i~v~D~a~~ 218 (236)
T PF01370_consen 148 EELLRDYAKKYG-LRVTILRPPNVYGPGNPNNNSSSFLPSL--IRQAL--KGKPIKIPGDG----SQVRDFIHVDDLAEA 218 (236)
T ss_dssp HHHHHHHHHHHT-SEEEEEEESEEESTTSSSSSTSSHHHHH--HHHHH--TTSSEEEESTS----SCEEEEEEHHHHHHH
T ss_pred cccccccccccc-cccccccccccccccccccccccccchh--hHHhh--cCCcccccCCC----CCccceEEHHHHHHH
Confidence 6 222 4 9999999999999761 11 11111221 11122 25556665544 567889999999999
Q ss_pred HHHHhcCcCCcCCCCceEEee
Q 042242 258 HIWVATNDDISSTKGQAFNAI 278 (303)
Q Consensus 258 ~~~~~~~~~~~~~~g~~yni~ 278 (303)
+++++.++...+ ++|||+
T Consensus 219 ~~~~~~~~~~~~---~~yNig 236 (236)
T PF01370_consen 219 IVAALENPKAAG---GIYNIG 236 (236)
T ss_dssp HHHHHHHSCTTT---EEEEES
T ss_pred HHHHHhCCCCCC---CEEEeC
Confidence 999999987443 899985
No 27
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.95 E-value=4.1e-26 Score=199.40 Aligned_cols=250 Identities=18% Similarity=0.162 Sum_probs=169.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----cc----CCCeEEEEecCCCHHHHHHHHhccCcee
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----IQ----SSSYCFISCDLLNPLDIKRKLTLLEDVT 97 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~----~~~~~~~~~D~~~~~~l~~~~~~~~~V~ 97 (303)
.+|+||||||+||||++++++|+ ..|++|++++|++.... .. ..+++++.+|++|.+.+.++++++|.|+
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 82 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLL-FRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF 82 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHH-HCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence 35899999999999999999999 68999999988765321 00 1357889999999999999999999899
Q ss_pred EEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCC---
Q 042242 98 HIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKS--- 174 (303)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~--- 174 (303)
|+|+......+.....+.++.|+.++.++++++.+.. ...+++++|+...|++.....+ ...+++|+.+..|..
T Consensus 83 h~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~-~~~~iv~~SS~~~~~~~~~~~~--~~~~~~E~~~~~p~~~~~ 159 (325)
T PLN02989 83 HTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVS-SVKRVILTSSMAAVLAPETKLG--PNDVVDETFFTNPSFAEE 159 (325)
T ss_pred EeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcC-CceEEEEecchhheecCCccCC--CCCccCcCCCCchhHhcc
Confidence 9987543322223334578999999999999998752 2345666665445543211000 123467776655421
Q ss_pred ccchHHHHHHHHHH-----hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccC
Q 042242 175 NNFYYVLEDLLKEK-----LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDG 248 (303)
Q Consensus 175 ~~~~y~~~k~~~e~-----~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 248 (303)
+...|+.+|...|. .+.. ++++++||+++||++.....++... ....+.. +.+.. + ....++
T Consensus 160 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~--~i~~~~~--~~~~~--~------~~~r~~ 227 (325)
T PLN02989 160 RKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVA--VIVELMK--GKNPF--N------TTHHRF 227 (325)
T ss_pred cccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHH--HHHHHHc--CCCCC--C------CcCcCe
Confidence 12238888887772 2222 9999999999999764322122111 1112222 22211 1 122458
Q ss_pred ccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhc
Q 042242 249 SDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFG 297 (303)
Q Consensus 249 ~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g 297 (303)
++++|+|++++.++..+.. + ++||++ +..+|++|+++.|++.++
T Consensus 228 i~v~Dva~a~~~~l~~~~~-~---~~~ni~-~~~~s~~ei~~~i~~~~~ 271 (325)
T PLN02989 228 VDVRDVALAHVKALETPSA-N---GRYIID-GPVVTIKDIENVLREFFP 271 (325)
T ss_pred eEHHHHHHHHHHHhcCccc-C---ceEEEe-cCCCCHHHHHHHHHHHCC
Confidence 8999999999998877643 2 589995 558999999999999987
No 28
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.95 E-value=3e-26 Score=200.04 Aligned_cols=247 Identities=15% Similarity=0.160 Sum_probs=167.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------c--cCCCeEEEEecCCCHHHHHHHHhccCceeE
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------I--QSSSYCFISCDLLNPLDIKRKLTLLEDVTH 98 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~--~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~ 98 (303)
+++|||||||||||++|+++|+ +.||+|++++|+..... . ..++++++.+|+.|.+.+..+++++|.|+|
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 82 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLL-QRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH 82 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHH-HCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence 5799999999999999999999 68999999999765321 0 024688999999999999999999999999
Q ss_pred EeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeeccc--ccccccCCCcccccCCcCcCCCCCCCC--
Q 042242 99 IFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMK--HYVSLQGLPEEKQVRFYDEECPRVSKS-- 174 (303)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~--~y~~~~~~~g~~~~~~~~e~~~~~p~~-- 174 (303)
+|+.......... .+.+++|+.++.++++++.+. ..+.++++.|+.. .|++.... ...+++|+.+..|.+
T Consensus 83 ~A~~~~~~~~~~~-~~~~~~nv~gt~~ll~a~~~~-~~~~~~v~~SS~~~~~y~~~~~~----~~~~~~E~~~~~p~~~~ 156 (322)
T PLN02662 83 TASPFYHDVTDPQ-AELIDPAVKGTLNVLRSCAKV-PSVKRVVVTSSMAAVAYNGKPLT----PDVVVDETWFSDPAFCE 156 (322)
T ss_pred eCCcccCCCCChH-HHHHHHHHHHHHHHHHHHHhC-CCCCEEEEccCHHHhcCCCcCCC----CCCcCCcccCCChhHhh
Confidence 9875322111111 247899999999999999865 1244666666543 35322100 123467766554421
Q ss_pred -ccchHHHHHHHHHH-----hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhccc
Q 042242 175 -NNFYYVLEDLLKEK-----LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLD 247 (303)
Q Consensus 175 -~~~~y~~~k~~~e~-----~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 247 (303)
....|+.+|.+.|. .+.. ++++++||+++||+........... ....+.. +.+ .++ ....+
T Consensus 157 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~--~~~~~~~--~~~-~~~-------~~~~~ 224 (322)
T PLN02662 157 ESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAE--AILNLIN--GAQ-TFP-------NASYR 224 (322)
T ss_pred cccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHH--HHHHHhc--CCc-cCC-------CCCcC
Confidence 11238888887763 2222 9999999999999754322111111 1111111 222 111 23457
Q ss_pred CccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcc
Q 042242 248 GSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGV 298 (303)
Q Consensus 248 ~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~ 298 (303)
++|++|+|++++.++..+... +.||++ +..+|++|+++.+.+.++.
T Consensus 225 ~i~v~Dva~a~~~~~~~~~~~----~~~~~~-g~~~s~~e~~~~i~~~~~~ 270 (322)
T PLN02662 225 WVDVRDVANAHIQAFEIPSAS----GRYCLV-ERVVHYSEVVKILHELYPT 270 (322)
T ss_pred eEEHHHHHHHHHHHhcCcCcC----CcEEEe-CCCCCHHHHHHHHHHHCCC
Confidence 899999999999988876432 478887 4789999999999998763
No 29
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.95 E-value=6.2e-26 Score=199.37 Aligned_cols=258 Identities=14% Similarity=0.074 Sum_probs=172.3
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------ccCCCeEEEEecCCCHHHHHHHHhc--cCceeE
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------IQSSSYCFISCDLLNPLDIKRKLTL--LEDVTH 98 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~D~~~~~~l~~~~~~--~~~V~~ 98 (303)
++|+|||||||||++|+++|+ +.|++|++++|...... ....++.++.+|+.|.+.+.++++. +|.|+|
T Consensus 1 m~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh 79 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLL-QNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIH 79 (338)
T ss_pred CeEEEECCCChHHHHHHHHHH-HCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEE
Confidence 479999999999999999999 68999999987532211 0123467889999999999988874 677999
Q ss_pred EeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCC-CCCCccc
Q 042242 99 IFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPR-VSKSNNF 177 (303)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~-~p~~~~~ 177 (303)
+++............+.++.|+.++.+++++|++.+ ..+++++|+..+|+.. ...+++|+++. .|..+
T Consensus 80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~yg~~-------~~~~~~E~~~~~~p~~~-- 148 (338)
T PRK10675 80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN--VKNLIFSSSATVYGDQ-------PKIPYVESFPTGTPQSP-- 148 (338)
T ss_pred CCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEeccHHhhCCC-------CCCccccccCCCCCCCh--
Confidence 976543222223334578999999999999999763 3456666665577532 23457787765 44455
Q ss_pred hHHHHHHHHH-----Hhc-CC-cceEEecCCceeecCCCCccc-----hhhHHH-HHHHHhhhCCCceeeCCch---hhh
Q 042242 178 YYVLEDLLKE-----KLA-GK-VAWSVHRPGLLLGSSHRSLYN-----FLGCLC-VYGAVCKHLNLPFVFGGTR---EIW 241 (303)
Q Consensus 178 ~y~~~k~~~e-----~~~-~~-~~~~ilRp~~v~G~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~g~~---~~~ 241 (303)
|+.+|...| +.+ .. ++++++|++++||+.+...+. ....+. ....+......++.+.|.. ...
T Consensus 149 -Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 227 (338)
T PRK10675 149 -YGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDG 227 (338)
T ss_pred -hHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCC
Confidence 888777666 222 22 889999999999974321110 001111 1111222112222222210 001
Q ss_pred hhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 242 EEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 242 ~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
.+..++++++|+|++++.++...... .++++||+++++.+|+.|+++.+++.+|++.+
T Consensus 228 -~~~~~~v~v~D~a~~~~~~~~~~~~~-~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~ 285 (338)
T PRK10675 228 -TGVRDYIHVMDLADGHVAAMEKLANK-PGVHIYNLGAGVGSSVLDVVNAFSKACGKPVN 285 (338)
T ss_pred -cEEEeeEEHHHHHHHHHHHHHhhhcc-CCCceEEecCCCceeHHHHHHHHHHHhCCCCC
Confidence 56678999999999999888652111 22479999999999999999999999998754
No 30
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.95 E-value=9.5e-26 Score=198.11 Aligned_cols=257 Identities=16% Similarity=0.145 Sum_probs=167.5
Q ss_pred CCCCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------c-cCCCeEEEEecCCCHHHHHHHHhccC
Q 042242 23 REVDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------I-QSSSYCFISCDLLNPLDIKRKLTLLE 94 (303)
Q Consensus 23 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~-~~~~~~~~~~D~~~~~~l~~~~~~~~ 94 (303)
-+++++++||||||+||||++|+++|+ +.|++|++++|+..... . ...+++++.+|++|.+.+.+.++++|
T Consensus 4 ~~~~~~~~vlItG~~GfIG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 82 (338)
T PLN00198 4 LTPTGKKTACVIGGTGFLASLLIKLLL-QKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCD 82 (338)
T ss_pred ccCCCCCeEEEECCchHHHHHHHHHHH-HCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCC
Confidence 345667899999999999999999999 68999999998764321 1 11358889999999999999999999
Q ss_pred ceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCC------
Q 042242 95 DVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC------ 168 (303)
Q Consensus 95 ~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~------ 168 (303)
.|+|+|+...... .....+.+++|+.++.++++++.+.. ...++++.|+...|+.... .+ ...+..|+.
T Consensus 83 ~vih~A~~~~~~~-~~~~~~~~~~nv~g~~~ll~a~~~~~-~~~~~v~~SS~~~~g~~~~-~~--~~~~~~E~~~~~~~~ 157 (338)
T PLN00198 83 LVFHVATPVNFAS-EDPENDMIKPAIQGVHNVLKACAKAK-SVKRVILTSSAAAVSINKL-SG--TGLVMNEKNWTDVEF 157 (338)
T ss_pred EEEEeCCCCccCC-CChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeecceeeeccCC-CC--CCceeccccCCchhh
Confidence 9999987432111 11112367999999999999998752 2446666666556753210 00 011233321
Q ss_pred ---CCCCCCccchHHHHHHHHH-----HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCC-ch
Q 042242 169 ---PRVSKSNNFYYVLEDLLKE-----KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGG-TR 238 (303)
Q Consensus 169 ---~~~p~~~~~~y~~~k~~~e-----~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~ 238 (303)
+..|.++ |+.+|...| +.... ++++++||++|||++....... .+.....+.. +.++...| ..
T Consensus 158 ~~~~~~p~~~---Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~--~~~~~~~~~~--~~~~~~~g~~~ 230 (338)
T PLN00198 158 LTSEKPPTWG---YPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPS--SLSLAMSLIT--GNEFLINGLKG 230 (338)
T ss_pred hhhcCCccch---hHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCC--cHHHHHHHHc--CCccccccccc
Confidence 1223445 888888777 22322 9999999999999764321111 1111111111 33333333 11
Q ss_pred -hhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcc
Q 042242 239 -EIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGV 298 (303)
Q Consensus 239 -~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~ 298 (303)
..+ ....+++|++|+|++++.++..+... +.| ++++...|+.|+++.+.+.++.
T Consensus 231 ~~~~-~~~~~~i~V~D~a~a~~~~~~~~~~~----~~~-~~~~~~~s~~el~~~i~~~~~~ 285 (338)
T PLN00198 231 MQML-SGSISITHVEDVCRAHIFLAEKESAS----GRY-ICCAANTSVPELAKFLIKRYPQ 285 (338)
T ss_pred cccc-cCCcceeEHHHHHHHHHHHhhCcCcC----CcE-EEecCCCCHHHHHHHHHHHCCC
Confidence 111 12358999999999999988775322 468 4556778999999999988753
No 31
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.95 E-value=1.9e-25 Score=195.38 Aligned_cols=245 Identities=18% Similarity=0.172 Sum_probs=170.9
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCceeEEeecccccC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWASQ 107 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~~~ 107 (303)
++|+||||+||||+++++.|+ +.|++|++++|++.... ....+++++.+|+.|.+++.++++++|.|+|+++....
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~-- 77 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLL-EQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRL-- 77 (328)
T ss_pred CeEEEECCccchhHHHHHHHH-HCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceeccc--
Confidence 479999999999999999999 68999999999876532 22347889999999999999999999989999764211
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHH
Q 042242 108 FASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE 187 (303)
Q Consensus 108 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e 187 (303)
....+.+.++.|+.++.++++++++.. ..++++.|+..+|+... ...+.+|+.+..|..+...|+.+|...|
T Consensus 78 ~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~~~~~------~~~~~~e~~~~~~~~~~~~Y~~sK~~~e 149 (328)
T TIGR03466 78 WAPDPEEMYAANVEGTRNLLRAALEAG--VERVVYTSSVATLGVRG------DGTPADETTPSSLDDMIGHYKRSKFLAE 149 (328)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEechhhcCcCC------CCCCcCccCCCCcccccChHHHHHHHHH
Confidence 122234478999999999999998763 34666666655675321 1346777777654333334887776665
Q ss_pred -----HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHH
Q 042242 188 -----KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWV 261 (303)
Q Consensus 188 -----~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~ 261 (303)
+.... ++++++||+.+||++....... ..+ ...... ...+.. .+ ...++++++|+|++++.+
T Consensus 150 ~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~-~~~--~~~~~~-~~~~~~-~~-------~~~~~i~v~D~a~a~~~~ 217 (328)
T TIGR03466 150 QAALEMAAEKGLPVVIVNPSTPIGPRDIKPTPT-GRI--IVDFLN-GKMPAY-VD-------TGLNLVHVDDVAEGHLLA 217 (328)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCCCCCCCcH-HHH--HHHHHc-CCCcee-eC-------CCcceEEHHHHHHHHHHH
Confidence 22222 8999999999999754322111 111 111111 122322 12 123578999999999988
Q ss_pred hcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 262 ATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 262 ~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
+..+. . +..||++ ++.+|+.|+++.+++.+|++.+
T Consensus 218 ~~~~~-~---~~~~~~~-~~~~s~~e~~~~i~~~~g~~~~ 252 (328)
T TIGR03466 218 LERGR-I---GERYILG-GENLTLKQILDKLAEITGRPAP 252 (328)
T ss_pred HhCCC-C---CceEEec-CCCcCHHHHHHHHHHHhCCCCC
Confidence 87643 2 3678875 6889999999999999998654
No 32
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.95 E-value=1.1e-25 Score=196.32 Aligned_cols=246 Identities=15% Similarity=0.142 Sum_probs=166.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----c-----cCCCeEEEEecCCCHHHHHHHHhccCceeE
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----I-----QSSSYCFISCDLLNPLDIKRKLTLLEDVTH 98 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~-----~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~ 98 (303)
+++|||||||||||++++++|+ +.||+|+++.|+..+.. . ...+++++.+|++|.+.+.++++++|.|+|
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 5 GKLVCVTGASGYIASWIVKLLL-LRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 5799999999999999999999 68999999999765421 0 124688999999999999999999999999
Q ss_pred EeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeeccccc--ccccCCCcccccCCcCcCCCCCCC---
Q 042242 99 IFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHY--VSLQGLPEEKQVRFYDEECPRVSK--- 173 (303)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y--~~~~~~~g~~~~~~~~e~~~~~p~--- 173 (303)
+|+........ ...+.++.|+.++.++++++++. ..+.+++++|+...| +..... ...+++|++...|.
T Consensus 84 ~A~~~~~~~~~-~~~~~~~~nv~gt~~ll~~~~~~-~~v~rvV~~SS~~~~~~~~~~~~----~~~~~~E~~~~~p~~~~ 157 (322)
T PLN02986 84 TASPVFFTVKD-PQTELIDPALKGTINVLNTCKET-PSVKRVILTSSTAAVLFRQPPIE----ANDVVDETFFSDPSLCR 157 (322)
T ss_pred eCCCcCCCCCC-chhhhhHHHHHHHHHHHHHHHhc-CCccEEEEecchhheecCCccCC----CCCCcCcccCCChHHhh
Confidence 98753221111 11236899999999999999874 224456666554333 221100 12345666543321
Q ss_pred CccchHHHHHHHHHH-----hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhccc
Q 042242 174 SNNFYYVLEDLLKEK-----LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLD 247 (303)
Q Consensus 174 ~~~~~y~~~k~~~e~-----~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 247 (303)
.+...|+.+|.+.|. .+.. ++++++||+.+||+......++... ....+.. +.+. .+ ....+
T Consensus 158 ~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~--~~~~~~~--g~~~--~~------~~~~~ 225 (322)
T PLN02986 158 ETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVE--LIVDFIN--GKNL--FN------NRFYR 225 (322)
T ss_pred ccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHH--HHHHHHc--CCCC--CC------CcCcc
Confidence 123348888887762 2222 9999999999999753322121111 1111111 2232 12 23456
Q ss_pred CccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhc
Q 042242 248 GSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFG 297 (303)
Q Consensus 248 ~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g 297 (303)
++|++|+|+++++++..+... ++||++ ++.+|++|+++.+.+.++
T Consensus 226 ~v~v~Dva~a~~~al~~~~~~----~~yni~-~~~~s~~e~~~~i~~~~~ 270 (322)
T PLN02986 226 FVDVRDVALAHIKALETPSAN----GRYIID-GPIMSVNDIIDILRELFP 270 (322)
T ss_pred eeEHHHHHHHHHHHhcCcccC----CcEEEe-cCCCCHHHHHHHHHHHCC
Confidence 899999999999999876432 489995 568999999999999886
No 33
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=99.95 E-value=4.2e-26 Score=188.88 Aligned_cols=225 Identities=17% Similarity=0.155 Sum_probs=178.4
Q ss_pred EEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhcc--CceeEEeecccccC
Q 042242 30 VAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLL--EDVTHIFWVTWASQ 107 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~--~~V~~~~~~~~~~~ 107 (303)
+|||||++|++|+.|++.|. .+++|++++|.. +|++|++.+.+++++. |.|||+|+....+.
T Consensus 2 ~iLi~G~~GqLG~~L~~~l~--~~~~v~a~~~~~--------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD~ 65 (281)
T COG1091 2 KILITGANGQLGTELRRALP--GEFEVIATDRAE--------------LDITDPDAVLEVIRETRPDVVINAAAYTAVDK 65 (281)
T ss_pred cEEEEcCCChHHHHHHHHhC--CCceEEeccCcc--------------ccccChHHHHHHHHhhCCCEEEECcccccccc
Confidence 49999999999999999995 678999999885 7999999999999977 46999988777777
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHH
Q 042242 108 FASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE 187 (303)
Q Consensus 108 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e 187 (303)
...+++..+.+|..++.++.++|.+.+..++|+|+ ..+|.+. ...|+.|+++..|.+- |+++|++.|
T Consensus 66 aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiST---DyVFDG~-------~~~~Y~E~D~~~P~nv---YG~sKl~GE 132 (281)
T COG1091 66 AESEPELAFAVNATGAENLARAAAEVGARLVHIST---DYVFDGE-------KGGPYKETDTPNPLNV---YGRSKLAGE 132 (281)
T ss_pred ccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeec---ceEecCC-------CCCCCCCCCCCCChhh---hhHHHHHHH
Confidence 77777779999999999999999999888888775 2244333 2568999999877666 999999999
Q ss_pred Hhc-CC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCc
Q 042242 188 KLA-GK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATND 265 (303)
Q Consensus 188 ~~~-~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~ 265 (303)
..- .. -+..|+|.+++||..++ ++...+. .+.+ .+.++.... .++..++++.|+|+++..++...
T Consensus 133 ~~v~~~~~~~~I~Rtswv~g~~g~---nFv~tml---~la~-~~~~l~vv~------Dq~gsPt~~~dlA~~i~~ll~~~ 199 (281)
T COG1091 133 EAVRAAGPRHLILRTSWVYGEYGN---NFVKTML---RLAK-EGKELKVVD------DQYGSPTYTEDLADAILELLEKE 199 (281)
T ss_pred HHHHHhCCCEEEEEeeeeecCCCC---CHHHHHH---HHhh-cCCceEEEC------CeeeCCccHHHHHHHHHHHHhcc
Confidence 543 21 68899999999996543 3322221 1111 244555554 67778999999999999988776
Q ss_pred CCcCCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 266 DISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 266 ~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
.. +++||+++...+||.|+++.|.+.+|.+.
T Consensus 200 ~~----~~~yH~~~~g~~Swydfa~~I~~~~~~~~ 230 (281)
T COG1091 200 KE----GGVYHLVNSGECSWYEFAKAIFEEAGVDG 230 (281)
T ss_pred cc----CcEEEEeCCCcccHHHHHHHHHHHhCCCc
Confidence 43 24999999999999999999999998554
No 34
>PLN02650 dihydroflavonol-4-reductase
Probab=99.95 E-value=1.1e-25 Score=198.74 Aligned_cols=247 Identities=14% Similarity=0.152 Sum_probs=161.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----c-c----CCCeEEEEecCCCHHHHHHHHhccCcee
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----I-Q----SSSYCFISCDLLNPLDIKRKLTLLEDVT 97 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~-~----~~~~~~~~~D~~~~~~l~~~~~~~~~V~ 97 (303)
..++||||||+||||++++++|+ +.|++|++++|+..... . . ..+++++.+|+.|.+.+.++++++|.|+
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~Vi 82 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLL-ERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVF 82 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHH-HCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEE
Confidence 35799999999999999999999 68999999999764421 0 0 1257889999999999999999999999
Q ss_pred EEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCC-cCcCCCC------
Q 042242 98 HIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRF-YDEECPR------ 170 (303)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~-~~e~~~~------ 170 (303)
|+|+...... .....+.+++|+.++.+++++|.+.. ...++++.|+...|+.... ..+ ++|+...
T Consensus 83 H~A~~~~~~~-~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~r~v~~SS~~~~~~~~~------~~~~~~E~~~~~~~~~~ 154 (351)
T PLN02650 83 HVATPMDFES-KDPENEVIKPTVNGMLSIMKACAKAK-TVRRIVFTSSAGTVNVEEH------QKPVYDEDCWSDLDFCR 154 (351)
T ss_pred EeCCCCCCCC-CCchhhhhhHHHHHHHHHHHHHHhcC-CceEEEEecchhhcccCCC------CCCccCcccCCchhhhh
Confidence 9986532211 11112478999999999999998753 1345555555444432211 112 3443210
Q ss_pred CCCCccchHHHHHHHHHH-----hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhh
Q 042242 171 VSKSNNFYYVLEDLLKEK-----LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEY 244 (303)
Q Consensus 171 ~p~~~~~~y~~~k~~~e~-----~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 244 (303)
.+..+.+.|+.+|...|. .... ++++++||+++||++...... ..+........ +....... ..
T Consensus 155 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~--~~~~~~~~~~~--~~~~~~~~------~~ 224 (351)
T PLN02650 155 RKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMP--PSLITALSLIT--GNEAHYSI------IK 224 (351)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCC--ccHHHHHHHhc--CCccccCc------CC
Confidence 011122238988888772 2222 999999999999975432211 11111111111 11111111 11
Q ss_pred cccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhc
Q 042242 245 CLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFG 297 (303)
Q Consensus 245 ~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g 297 (303)
..++++++|+|++++.++..+... +.| +++++.+|+.|+++.|++.++
T Consensus 225 ~r~~v~V~Dva~a~~~~l~~~~~~----~~~-i~~~~~~s~~el~~~i~~~~~ 272 (351)
T PLN02650 225 QGQFVHLDDLCNAHIFLFEHPAAE----GRY-ICSSHDATIHDLAKMLREKYP 272 (351)
T ss_pred CcceeeHHHHHHHHHHHhcCcCcC----ceE-EecCCCcCHHHHHHHHHHhCc
Confidence 247899999999999998775432 468 566678999999999999876
No 35
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.95 E-value=3.3e-26 Score=199.08 Aligned_cols=223 Identities=10% Similarity=0.068 Sum_probs=156.6
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCceeEEeecccccC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWASQ 107 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~~~ 107 (303)
|+|+|||||||||++++++|+ +.||+|++++|++.+.. ....+++++.+|+.|++++.++++++|.|+|+++...
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll-~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~--- 76 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQAL-DEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRP--- 76 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHH-HCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCC---
Confidence 489999999999999999999 68999999999865432 2235799999999999999999999999999864321
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHH
Q 042242 108 FASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE 187 (303)
Q Consensus 108 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e 187 (303)
.. .....+.|+.++.+++++|++.+ +.++++.|+...+ .+ +..+ |...|...|
T Consensus 77 ~~--~~~~~~~~~~~~~~l~~aa~~~g--vkr~I~~Ss~~~~-----~~---------------~~~~---~~~~K~~~e 129 (317)
T CHL00194 77 SD--LYNAKQIDWDGKLALIEAAKAAK--IKRFIFFSILNAE-----QY---------------PYIP---LMKLKSDIE 129 (317)
T ss_pred CC--ccchhhhhHHHHHHHHHHHHHcC--CCEEEEecccccc-----cc---------------CCCh---HHHHHHHHH
Confidence 11 12267889999999999999873 4455555431110 00 0123 444444443
Q ss_pred H-hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCc
Q 042242 188 K-LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATND 265 (303)
Q Consensus 188 ~-~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~ 265 (303)
. .... ++++++||+.+|+.... .. ... +. .+.+....+. ...+++++++|+|++++.++..+
T Consensus 130 ~~l~~~~l~~tilRp~~~~~~~~~-------~~-~~~-~~--~~~~~~~~~~-----~~~~~~i~v~Dva~~~~~~l~~~ 193 (317)
T CHL00194 130 QKLKKSGIPYTIFRLAGFFQGLIS-------QY-AIP-IL--EKQPIWITNE-----STPISYIDTQDAAKFCLKSLSLP 193 (317)
T ss_pred HHHHHcCCCeEEEeecHHhhhhhh-------hh-hhh-hc--cCCceEecCC-----CCccCccCHHHHHHHHHHHhcCc
Confidence 1 1122 99999999988862110 00 000 11 1234443332 33457899999999999988776
Q ss_pred CCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 266 DISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 266 ~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
...+ ++||+++++.+|++|+++.+++.+|++..
T Consensus 194 ~~~~---~~~ni~g~~~~s~~el~~~~~~~~g~~~~ 226 (317)
T CHL00194 194 ETKN---KTFPLVGPKSWNSSEIISLCEQLSGQKAK 226 (317)
T ss_pred cccC---cEEEecCCCccCHHHHHHHHHHHhCCCCe
Confidence 5444 89999999999999999999999998643
No 36
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.94 E-value=1.2e-26 Score=198.34 Aligned_cols=230 Identities=20% Similarity=0.173 Sum_probs=159.7
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhcc--CceeEEeeccccc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLL--EDVTHIFWVTWAS 106 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~--~~V~~~~~~~~~~ 106 (303)
||||||||+|+||++|.++|. ..|++|+++.|. ..|+.|.+.+.+.++.. |.|+|+++....+
T Consensus 1 MriLI~GasG~lG~~l~~~l~-~~~~~v~~~~r~--------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~ 65 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALK-ERGYEVIATSRS--------------DLDLTDPEAVAKLLEAFKPDVVINCAAYTNVD 65 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHT-TTSEEEEEESTT--------------CS-TTSHHHHHHHHHHH--SEEEE------HH
T ss_pred CEEEEECCCCHHHHHHHHHHh-hCCCEEEEeCch--------------hcCCCCHHHHHHHHHHhCCCeEeccceeecHH
Confidence 589999999999999999998 689999999777 37999999999999874 4699998776666
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHH
Q 042242 107 QFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLK 186 (303)
Q Consensus 107 ~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~ 186 (303)
.+..++...+++|+.++.++.++|...+.+++|+| +..+|.+. ...|+.|+++..|.+. |+.+|...
T Consensus 66 ~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~S---Td~VFdG~-------~~~~y~E~d~~~P~~~---YG~~K~~~ 132 (286)
T PF04321_consen 66 ACEKNPEEAYAINVDATKNLAEACKERGARLIHIS---TDYVFDGD-------KGGPYTEDDPPNPLNV---YGRSKLEG 132 (286)
T ss_dssp HHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEE---EGGGS-SS-------TSSSB-TTS----SSH---HHHHHHHH
T ss_pred hhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEee---ccEEEcCC-------cccccccCCCCCCCCH---HHHHHHHH
Confidence 66667777999999999999999998765555554 44577554 2557899998776666 99999999
Q ss_pred HHh---cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhc
Q 042242 187 EKL---AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVAT 263 (303)
Q Consensus 187 e~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~ 263 (303)
|.. .. -++.|+|++.+||.... ++...+. ..+ ..+.++.... ..+..+++++|+|+.++.++.
T Consensus 133 E~~v~~~~-~~~~IlR~~~~~g~~~~---~~~~~~~--~~~--~~~~~i~~~~------d~~~~p~~~~dlA~~i~~l~~ 198 (286)
T PF04321_consen 133 EQAVRAAC-PNALILRTSWVYGPSGR---NFLRWLL--RRL--RQGEPIKLFD------DQYRSPTYVDDLARVILELIE 198 (286)
T ss_dssp HHHHHHH--SSEEEEEE-SEESSSSS---SHHHHHH--HHH--HCTSEEEEES------SCEE--EEHHHHHHHHHHHHH
T ss_pred HHHHHHhc-CCEEEEecceecccCCC---chhhhHH--HHH--hcCCeeEeeC------CceeCCEEHHHHHHHHHHHHH
Confidence 853 12 58999999999996332 2222211 112 2255555555 556678999999999999887
Q ss_pred CcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 264 NDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 264 ~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
.........++||+++++.+|+.|+++.+++.+|.+.
T Consensus 199 ~~~~~~~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~ 235 (286)
T PF04321_consen 199 KNLSGASPWGIYHLSGPERVSRYEFAEAIAKILGLDP 235 (286)
T ss_dssp HHHH-GGG-EEEE---BS-EEHHHHHHHHHHHHTHCT
T ss_pred hcccccccceeEEEecCcccCHHHHHHHHHHHhCCCC
Confidence 7643111136999999999999999999999999876
No 37
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=99.94 E-value=1.2e-25 Score=194.76 Aligned_cols=238 Identities=15% Similarity=0.078 Sum_probs=162.7
Q ss_pred EEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhcc--CceeEEeecccc-cCC
Q 042242 32 VIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLL--EDVTHIFWVTWA-SQF 108 (303)
Q Consensus 32 lVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~--~~V~~~~~~~~~-~~~ 108 (303)
||||||||||++|+++|+ ..|++|+++.++. .+|+.|.+++.++++.. |.|+|+|+.... ...
T Consensus 1 lItGa~GfiG~~l~~~L~-~~g~~v~~~~~~~-------------~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~ 66 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLE-ALGFTNLVLRTHK-------------ELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHAN 66 (306)
T ss_pred CcccCCCcccHHHHHHHH-hCCCcEEEeeccc-------------cCCCCCHHHHHHHHhccCCCEEEEeeeeecccchh
Confidence 699999999999999999 6788877664332 38999999999998864 679999876322 112
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCC-CCCc-cchHHHHHHHH
Q 042242 109 ASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRV-SKSN-NFYYVLEDLLK 186 (303)
Q Consensus 109 ~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~-p~~~-~~~y~~~k~~~ 186 (303)
...+.+.++.|+.++.+++++|++.. +.++++.|+..+|+.. ...|++|+++.. |..| +..|+.+|.+.
T Consensus 67 ~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~i~~SS~~vyg~~-------~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~ 137 (306)
T PLN02725 67 MTYPADFIRENLQIQTNVIDAAYRHG--VKKLLFLGSSCIYPKF-------APQPIPETALLTGPPEPTNEWYAIAKIAG 137 (306)
T ss_pred hhCcHHHHHHHhHHHHHHHHHHHHcC--CCeEEEeCceeecCCC-------CCCCCCHHHhccCCCCCCcchHHHHHHHH
Confidence 22334578999999999999999763 4566666666677543 244677766321 1222 22388877777
Q ss_pred HH-----hcCC-cceEEecCCceeecCCCCc---cchhhHHHHHHHHhhhCCCceee-CCchhhhhhhcccCccHHHHHH
Q 042242 187 EK-----LAGK-VAWSVHRPGLLLGSSHRSL---YNFLGCLCVYGAVCKHLNLPFVF-GGTREIWEEYCLDGSDSRLVAE 256 (303)
Q Consensus 187 e~-----~~~~-~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~a~ 256 (303)
|. .+.. ++++++||+.+||++.... ......+..........+.++.. .++. .+..++++++|+++
T Consensus 138 e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g----~~~~~~i~v~Dv~~ 213 (306)
T PLN02725 138 IKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSG----SPLREFLHVDDLAD 213 (306)
T ss_pred HHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCC----CeeeccccHHHHHH
Confidence 62 2222 9999999999999764311 11122221111111122444433 4433 45567899999999
Q ss_pred HHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 257 QHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 257 a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
+++.++..... ++.||+++++.+|+.|+++.+++.+|.+.
T Consensus 214 ~~~~~~~~~~~----~~~~ni~~~~~~s~~e~~~~i~~~~~~~~ 253 (306)
T PLN02725 214 AVVFLMRRYSG----AEHVNVGSGDEVTIKELAELVKEVVGFEG 253 (306)
T ss_pred HHHHHHhcccc----CcceEeCCCCcccHHHHHHHHHHHhCCCC
Confidence 99998876432 25799999999999999999999998764
No 38
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.94 E-value=5.5e-26 Score=187.83 Aligned_cols=254 Identities=15% Similarity=0.101 Sum_probs=188.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----------ccCCCeEEEEecCCCHHHHHHHHhccC--
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----------IQSSSYCFISCDLLNPLDIKRKLTLLE-- 94 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----------~~~~~~~~~~~D~~~~~~l~~~~~~~~-- 94 (303)
+.++||||||+||||+|.+.+|+ +.||+|.+++.-..... .+..++.++.+|++|.+.++++|+...
T Consensus 1 ~~~~VLVtGgaGyiGsht~l~L~-~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd 79 (343)
T KOG1371|consen 1 GGKHVLVTGGAGYIGSHTVLALL-KRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFD 79 (343)
T ss_pred CCcEEEEecCCcceehHHHHHHH-hCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCc
Confidence 35799999999999999999999 79999999997432211 234689999999999999999999776
Q ss_pred ceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCC-CC
Q 042242 95 DVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRV-SK 173 (303)
Q Consensus 95 ~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~-p~ 173 (303)
.|+|.|+......+-..+..+...|+.++.++++.++++. ...+++.|+..+||.+ ...|+.|++|.. |.
T Consensus 80 ~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~--~~~~V~sssatvYG~p-------~~ip~te~~~t~~p~ 150 (343)
T KOG1371|consen 80 AVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN--VKALVFSSSATVYGLP-------TKVPITEEDPTDQPT 150 (343)
T ss_pred eEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC--CceEEEecceeeecCc-------ceeeccCcCCCCCCC
Confidence 4999988877777777777789999999999999999984 5666666676688666 367899999987 78
Q ss_pred CccchHHHHHHHHH-----HhcCC-cceEEecCCceeecCCCC---------ccchhhHHHHHHHHhhhC-----CCce-
Q 042242 174 SNNFYYVLEDLLKE-----KLAGK-VAWSVHRPGLLLGSSHRS---------LYNFLGCLCVYGAVCKHL-----NLPF- 232 (303)
Q Consensus 174 ~~~~~y~~~k~~~e-----~~~~~-~~~~ilRp~~v~G~~~~~---------~~~~~~~~~~~~~~~~~~-----~~~~- 232 (303)
+| |+.+|...| ..... +.++++|.++++|..+.- +.++++ .....++.+.. +.++
T Consensus 151 ~p---yg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p-~v~~vaigr~~~l~v~g~d~~ 226 (343)
T KOG1371|consen 151 NP---YGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLP-YVFQVAIGRRPNLQVVGRDYT 226 (343)
T ss_pred Cc---chhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccc-cccchhhcccccceeecCccc
Confidence 88 787776666 33333 889999999999943321 111111 11111122111 2222
Q ss_pred eeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 233 VFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 233 ~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
...| ....+.+|+.|+|...+.++........- ++||++.+...++.+++..+++++|++.+
T Consensus 227 t~dg------t~vrdyi~v~Dla~~h~~al~k~~~~~~~-~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k 288 (343)
T KOG1371|consen 227 TIDG------TIVRDYIHVLDLADGHVAALGKLRGAAEF-GVYNLGTGKGSSVLELVTAFEKALGVKIK 288 (343)
T ss_pred ccCC------CeeecceeeEehHHHHHHHhhccccchhe-eeEeecCCCCccHHHHHHHHHHHhcCCCC
Confidence 1122 44566778888899999888776543222 49999999999999999999999999887
No 39
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.94 E-value=2.5e-25 Score=193.45 Aligned_cols=246 Identities=12% Similarity=0.051 Sum_probs=162.0
Q ss_pred EEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHh----ccCceeEEeecccc
Q 042242 31 AVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLT----LLEDVTHIFWVTWA 105 (303)
Q Consensus 31 vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~----~~~~V~~~~~~~~~ 105 (303)
|||||||||||+++++.|+ +.|+ +|++++|..............+..|+.+.+.++.+.+ ++|.|+|+++....
T Consensus 1 ilItGatG~iG~~l~~~L~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~~ 79 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALN-ERGITDILVVDNLRDGHKFLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSDT 79 (314)
T ss_pred CEEeCCcchhhHHHHHHHH-HcCCceEEEEecCCCchhhhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECccccCc
Confidence 6999999999999999999 6787 6988887654322111122356678888877776654 67789999875432
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCC-CCCCccchHHHHHH
Q 042242 106 SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPR-VSKSNNFYYVLEDL 184 (303)
Q Consensus 106 ~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~-~p~~~~~~y~~~k~ 184 (303)
. ..++...+++|+.++.+++++|++... ++++.|+..+|+.. ..++.|+++. .|.++ |+.+|.
T Consensus 80 ~--~~~~~~~~~~n~~~~~~ll~~~~~~~~---~~v~~SS~~vy~~~--------~~~~~e~~~~~~p~~~---Y~~sK~ 143 (314)
T TIGR02197 80 T--ETDGEYMMENNYQYSKRLLDWCAEKGI---PFIYASSAATYGDG--------EAGFREGRELERPLNV---YGYSKF 143 (314)
T ss_pred c--ccchHHHHHHHHHHHHHHHHHHHHhCC---cEEEEccHHhcCCC--------CCCcccccCcCCCCCH---HHHHHH
Confidence 2 223344789999999999999988643 35555555577543 2235555543 24444 888777
Q ss_pred HHHH-----h--cCC-cceEEecCCceeecCCCCccchhhHHHH-HHHHhhhCCCceeeCCchhhh--hhhcccCccHHH
Q 042242 185 LKEK-----L--AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCV-YGAVCKHLNLPFVFGGTREIW--EEYCLDGSDSRL 253 (303)
Q Consensus 185 ~~e~-----~--~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~d 253 (303)
..|. . ... ++++++||+.+||++..........+.. ...+.. +.++...+....+ ..+..++++++|
T Consensus 144 ~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~i~v~D 221 (314)
T TIGR02197 144 LFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKA--GGNVKLFKSSEGFKDGEQLRDFVYVKD 221 (314)
T ss_pred HHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhc--CCCeEEecCccccCCCCceeeeEEHHH
Confidence 6662 1 122 7899999999999754321111011111 111222 3333322211000 056678999999
Q ss_pred HHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 254 VAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 254 ~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
++++++.++.. . . +++||+++++++|++|+++.+.+.+|++.
T Consensus 222 ~a~~i~~~~~~-~-~---~~~yni~~~~~~s~~e~~~~i~~~~g~~~ 263 (314)
T TIGR02197 222 VVDVNLWLLEN-G-V---SGIFNLGTGRARSFNDLADAVFKALGKDE 263 (314)
T ss_pred HHHHHHHHHhc-c-c---CceEEcCCCCCccHHHHHHHHHHHhCCCC
Confidence 99999988876 2 2 26999999999999999999999999764
No 40
>PLN02686 cinnamoyl-CoA reductase
Probab=99.94 E-value=2e-25 Score=197.53 Aligned_cols=258 Identities=14% Similarity=0.142 Sum_probs=165.8
Q ss_pred CCCCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-c-c----------CCCeEEEEecCCCHHHHHHHH
Q 042242 23 REVDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-I-Q----------SSSYCFISCDLLNPLDIKRKL 90 (303)
Q Consensus 23 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~-~----------~~~~~~~~~D~~~~~~l~~~~ 90 (303)
....++|+||||||+||||++++++|+ ..||+|+++.|+..... . . ..+++++.+|++|.+.+.+++
T Consensus 48 ~~~~~~k~VLVTGatGfIG~~lv~~L~-~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i 126 (367)
T PLN02686 48 GADAEARLVCVTGGVSFLGLAIVDRLL-RHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAF 126 (367)
T ss_pred ccCCCCCEEEEECCchHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHH
Confidence 345567899999999999999999999 68999999888754321 0 0 125788999999999999999
Q ss_pred hccCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecc--cccccccCCCcccccCCcCcCC
Q 042242 91 TLLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGM--KHYVSLQGLPEEKQVRFYDEEC 168 (303)
Q Consensus 91 ~~~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~--~~y~~~~~~~g~~~~~~~~e~~ 168 (303)
++++.|+|+++...............+.|+.++.+++++|+... .+.++++.|+. .+|+...... ...+++|+.
T Consensus 127 ~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~-~v~r~V~~SS~~~~vyg~~~~~~---~~~~i~E~~ 202 (367)
T PLN02686 127 DGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTE-SVRKCVFTSSLLACVWRQNYPHD---LPPVIDEES 202 (367)
T ss_pred HhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcC-CccEEEEeccHHHhcccccCCCC---CCcccCCCC
Confidence 99988899976532221100111256889999999999998741 24455555542 3554210000 011234433
Q ss_pred CCC---CCCccchHHHHHHHHHH-----hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchh
Q 042242 169 PRV---SKSNNFYYVLEDLLKEK-----LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTRE 239 (303)
Q Consensus 169 ~~~---p~~~~~~y~~~k~~~e~-----~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 239 (303)
... +..|...|+.+|...|. .... ++++++||++|||++....... .. . ...+ +. ..+.|+.
T Consensus 203 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~--~~--~-~~~~--g~-~~~~g~g- 273 (367)
T PLN02686 203 WSDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNST--AT--I-AYLK--GA-QEMLADG- 273 (367)
T ss_pred CCChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCCh--hH--H-HHhc--CC-CccCCCC-
Confidence 211 11222238988887773 2323 9999999999999754321110 11 1 1111 22 1222321
Q ss_pred hhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 240 IWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 240 ~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
..+++|++|+|++++.++..+... ..+++| +++++.++++|+++.+++.+|.+.+
T Consensus 274 -----~~~~v~V~Dva~A~~~al~~~~~~-~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~ 328 (367)
T PLN02686 274 -----LLATADVERLAEAHVCVYEAMGNK-TAFGRY-ICFDHVVSREDEAEELARQIGLPIN 328 (367)
T ss_pred -----CcCeEEHHHHHHHHHHHHhccCCC-CCCCcE-EEeCCCccHHHHHHHHHHHcCCCCC
Confidence 124788999999999988753110 123678 8888999999999999999997643
No 41
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=99.94 E-value=6.5e-26 Score=183.16 Aligned_cols=245 Identities=15% Similarity=0.051 Sum_probs=177.4
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc------cccCCCeEEEEecCCCHHHHHHHHhccCceeE
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT------AIQSSSYCFISCDLLNPLDIKRKLTLLEDVTH 98 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~------~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~ 98 (303)
+..+++|+||||.||||++|+..|. ..||+|++++.--... +...+.++.+.-|+.. .++.++|.|+|
T Consensus 24 p~~~lrI~itGgaGFIgSHLvdkLm-~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~-----pl~~evD~Iyh 97 (350)
T KOG1429|consen 24 PSQNLRILITGGAGFIGSHLVDKLM-TEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVE-----PLLKEVDQIYH 97 (350)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHH-hcCCeEEEEecccccchhhcchhccCcceeEEEeechh-----HHHHHhhhhhh
Confidence 4456899999999999999999999 6889999999643321 2345667777777755 58888899999
Q ss_pred EeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCC--CCCCcc
Q 042242 99 IFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPR--VSKSNN 176 (303)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~--~p~~~~ 176 (303)
+|+.+.....-.++.+.+.+|..++.+++..|++..+++ .+.|++.+|+.+ -..|..|+.-. .|..|.
T Consensus 98 LAapasp~~y~~npvktIktN~igtln~lglakrv~aR~---l~aSTseVYgdp-------~~hpq~e~ywg~vnpigpr 167 (350)
T KOG1429|consen 98 LAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVGARF---LLASTSEVYGDP-------LVHPQVETYWGNVNPIGPR 167 (350)
T ss_pred hccCCCCcccccCccceeeecchhhHHHHHHHHHhCceE---EEeecccccCCc-------ccCCCccccccccCcCCch
Confidence 988877666666666789999999999999999876544 444444577554 24445554422 234556
Q ss_pred chHHHHHHHHH-----HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCcc
Q 042242 177 FYYVLEDLLKE-----KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSD 250 (303)
Q Consensus 177 ~~y~~~k~~~e-----~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 250 (303)
..|...|.+.| +.+.. +.+.|.|++++|||.-... -....+.+.. ..-.+.|+.+.|++. +-..++.
T Consensus 168 ~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~--dgrvvsnf~~-q~lr~epltv~g~G~----qtRSF~y 240 (350)
T KOG1429|consen 168 SCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMD--DGRVVSNFIA-QALRGEPLTVYGDGK----QTRSFQY 240 (350)
T ss_pred hhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccC--CChhhHHHHH-HHhcCCCeEEEcCCc----ceEEEEe
Confidence 66888888887 33333 9999999999999643322 1223333322 222367777777664 4455677
Q ss_pred HHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhc
Q 042242 251 SRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFG 297 (303)
Q Consensus 251 ~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g 297 (303)
+.|++++++.++.++.. +.+||++++.+|+.|+++.+.+..|
T Consensus 241 vsD~Vegll~Lm~s~~~-----~pvNiGnp~e~Tm~elAemv~~~~~ 282 (350)
T KOG1429|consen 241 VSDLVEGLLRLMESDYR-----GPVNIGNPGEFTMLELAEMVKELIG 282 (350)
T ss_pred HHHHHHHHHHHhcCCCc-----CCcccCCccceeHHHHHHHHHHHcC
Confidence 77889999999988865 4599999999999999999998874
No 42
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.94 E-value=4.5e-25 Score=194.92 Aligned_cols=258 Identities=14% Similarity=0.163 Sum_probs=164.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc------ccCCCeEEEEecCCCHHHHHHHHhccCceeEEe
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA------IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIF 100 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~ 100 (303)
.+++||||||+||||++++++|+ ..|++|++++|+..+.. ....+++++.+|+.+.+.+.++++++|.|+|+|
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A 87 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLL-QRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVA 87 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECC
Confidence 45799999999999999999999 68999999998764321 012468899999999999999999888899998
Q ss_pred ecccccC--ChHHH-----HHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCC--
Q 042242 101 WVTWASQ--FASDM-----HKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRV-- 171 (303)
Q Consensus 101 ~~~~~~~--~~~~~-----~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~-- 171 (303)
+...... ...++ ...++.|+.++.+++++|.+.. ...++++.|+..+|+.... .|. ...+++|+.+..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~-~~~~~v~~SS~~vyg~~~~-~~~-~~~~~~E~~~~p~~ 164 (353)
T PLN02896 88 ASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK-TVKRVVFTSSISTLTAKDS-NGR-WRAVVDETCQTPID 164 (353)
T ss_pred ccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC-CccEEEEEechhhcccccc-CCC-CCCccCcccCCcHH
Confidence 7643221 11122 1245666799999999998752 2446666666667754311 000 012345542110
Q ss_pred ----CCCccchHHHHHHHHHH-----hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC--Cchh
Q 042242 172 ----SKSNNFYYVLEDLLKEK-----LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG--GTRE 239 (303)
Q Consensus 172 ----p~~~~~~y~~~k~~~e~-----~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~ 239 (303)
+..+.+.|+.+|.+.|. .+.. ++++++||++|||++.....+. .+........ +.+..++ +...
T Consensus 165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~--~~~~~~~~~~--g~~~~~~~~~~~~ 240 (353)
T PLN02896 165 HVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPS--SIQVLLSPIT--GDSKLFSILSAVN 240 (353)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCc--hHHHHHHHhc--CCccccccccccc
Confidence 01122239998888873 2222 9999999999999754322111 1111111111 2111111 1111
Q ss_pred hhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcc
Q 042242 240 IWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGV 298 (303)
Q Consensus 240 ~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~ 298 (303)
.. ..-.+++|++|+|++++.++..+.. ++.|+ +++...|+.|+++.+++.++.
T Consensus 241 ~~-~~~~dfi~v~Dva~a~~~~l~~~~~----~~~~~-~~~~~~s~~el~~~i~~~~~~ 293 (353)
T PLN02896 241 SR-MGSIALVHIEDICDAHIFLMEQTKA----EGRYI-CCVDSYDMSELINHLSKEYPC 293 (353)
T ss_pred cc-cCceeEEeHHHHHHHHHHHHhCCCc----CccEE-ecCCCCCHHHHHHHHHHhCCC
Confidence 00 1124789999999999998876432 24685 456789999999999998873
No 43
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=99.94 E-value=2.4e-25 Score=180.19 Aligned_cols=237 Identities=16% Similarity=0.139 Sum_probs=170.3
Q ss_pred EEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCC-CeEEEEecCCCHHHHHHHHh-ccCceeEEeecccccC-
Q 042242 31 AVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSS-SYCFISCDLLNPLDIKRKLT-LLEDVTHIFWVTWASQ- 107 (303)
Q Consensus 31 vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~D~~~~~~l~~~~~-~~~~V~~~~~~~~~~~- 107 (303)
|+|||||||||++|+.+|. ..||+|++++|++++...... .++ ..+.+.+... ++|+|||+|+.+...+
T Consensus 1 IliTGgTGlIG~~L~~~L~-~~gh~v~iltR~~~~~~~~~~~~v~-------~~~~~~~~~~~~~DavINLAG~~I~~rr 72 (297)
T COG1090 1 ILITGGTGLIGRALTARLR-KGGHQVTILTRRPPKASQNLHPNVT-------LWEGLADALTLGIDAVINLAGEPIAERR 72 (297)
T ss_pred CeEeccccchhHHHHHHHH-hCCCeEEEEEcCCcchhhhcCcccc-------ccchhhhcccCCCCEEEECCCCcccccc
Confidence 6899999999999999998 789999999999887542111 111 2233444444 6899999988776554
Q ss_pred -ChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCc--cchHHHHHH
Q 042242 108 -FASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSN--NFYYVLEDL 184 (303)
Q Consensus 108 -~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~--~~~y~~~k~ 184 (303)
+........+..+..|..++++..+...+...+++.|....|+.+ .+..++|+++.. ... ...+..|+.
T Consensus 73 Wt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~-------~~~~~tE~~~~g-~~Fla~lc~~WE~~ 144 (297)
T COG1090 73 WTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHS-------GDRVVTEESPPG-DDFLAQLCQDWEEE 144 (297)
T ss_pred CCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCC-------CceeeecCCCCC-CChHHHHHHHHHHH
Confidence 344455688999999999999999776677777776666566554 366788886543 222 223444555
Q ss_pred HHHHhc-CCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhc
Q 042242 185 LKEKLA-GKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVAT 263 (303)
Q Consensus 185 ~~e~~~-~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~ 263 (303)
....+. + .+++++|.|+|.|+..+....+.+.+ ....|.+ -|++ +++++++|++|+++++.+++.
T Consensus 145 a~~a~~~g-tRvvllRtGvVLs~~GGaL~~m~~~f------k~glGG~---~GsG----rQ~~SWIhieD~v~~I~fll~ 210 (297)
T COG1090 145 ALQAQQLG-TRVVLLRTGVVLSPDGGALGKMLPLF------KLGLGGK---LGSG----RQWFSWIHIEDLVNAILFLLE 210 (297)
T ss_pred HhhhhhcC-ceEEEEEEEEEecCCCcchhhhcchh------hhccCCc---cCCC----CceeeeeeHHHHHHHHHHHHh
Confidence 555443 4 89999999999996554322221121 1112333 2222 788999999999999999999
Q ss_pred CcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 264 NDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 264 ~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
+....| .||++.|.+++.+++.+++++++++|..
T Consensus 211 ~~~lsG----p~N~taP~PV~~~~F~~al~r~l~RP~~ 244 (297)
T COG1090 211 NEQLSG----PFNLTAPNPVRNKEFAHALGRALHRPAI 244 (297)
T ss_pred CcCCCC----cccccCCCcCcHHHHHHHHHHHhCCCcc
Confidence 987764 8999999999999999999999998864
No 44
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.94 E-value=1.9e-24 Score=188.96 Aligned_cols=257 Identities=16% Similarity=0.124 Sum_probs=170.4
Q ss_pred EEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---cc---CCCeEEEEecCCCHHHHHHHHh--ccCceeEEee
Q 042242 30 VAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---IQ---SSSYCFISCDLLNPLDIKRKLT--LLEDVTHIFW 101 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---~~---~~~~~~~~~D~~~~~~l~~~~~--~~~~V~~~~~ 101 (303)
+||||||||+||+++++.|+ +.|++|++++|...... .. ..+++.+.+|+.+.+++.++++ .+|.|+|+++
T Consensus 1 kvlV~GatG~iG~~l~~~l~-~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag 79 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLL-ESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAG 79 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHH-hCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECcc
Confidence 58999999999999999999 68999998876433211 10 1156788999999999999987 4567999976
Q ss_pred cccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHH
Q 042242 102 VTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVL 181 (303)
Q Consensus 102 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~ 181 (303)
............+.++.|+.++.+++++|.+.. ..++++.|+...|+.. ...+++|+++..|..+ |+.
T Consensus 80 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~ss~~~~g~~-------~~~~~~e~~~~~~~~~---y~~ 147 (328)
T TIGR01179 80 LIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG--VKKFIFSSSAAVYGEP-------SSIPISEDSPLGPINP---YGR 147 (328)
T ss_pred ccCcchhhcCchhhhhhhHHHHHHHHHHHHhcC--CCEEEEecchhhcCCC-------CCCCccccCCCCCCCc---hHH
Confidence 543322222334478999999999999998763 3456666665566433 1335778777665566 887
Q ss_pred HHHHHH-----HhcC-C-cceEEecCCceeecCCCCcc----chhhHHHH-HHHHhhhCCCceeeCCch---hhhhhhcc
Q 042242 182 EDLLKE-----KLAG-K-VAWSVHRPGLLLGSSHRSLY----NFLGCLCV-YGAVCKHLNLPFVFGGTR---EIWEEYCL 246 (303)
Q Consensus 182 ~k~~~e-----~~~~-~-~~~~ilRp~~v~G~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~g~~---~~~~~~~~ 246 (303)
+|...| +... . ++++++||+.+||+.+.... .....+.. ......+...++...|.. ... ....
T Consensus 148 sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~ 226 (328)
T TIGR01179 148 SKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDG-TCVR 226 (328)
T ss_pred HHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCC-ceEE
Confidence 776665 2222 3 99999999999997532110 00011111 111211112233222211 000 3456
Q ss_pred cCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 247 DGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 247 ~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
++++++|+|++++.++...... ..+++||+++++++|++|+++.+++.+|++.+
T Consensus 227 ~~v~~~D~a~~~~~~~~~~~~~-~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~ 280 (328)
T TIGR01179 227 DYIHVMDLADAHLAALEYLLNG-GESHVYNLGYGQGFSVLEVIEAFKKVSGVDFP 280 (328)
T ss_pred eeeeHHHHHHHHHHHHhhhhcC-CCcceEEcCCCCcccHHHHHHHHHHHhCCCcc
Confidence 7899999999998887642211 22479999999999999999999999998764
No 45
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.94 E-value=1.2e-24 Score=207.37 Aligned_cols=250 Identities=18% Similarity=0.195 Sum_probs=163.2
Q ss_pred CEEEEEcCCChhHHHHHHHHhh-cCCCeEEEEecCCccccc-------cCCCeEEEEecCCCH------HHHHHHHhccC
Q 042242 29 NVAVIFGVTGLVGKELARRLIS-TANWKVYGIARKPEITAI-------QSSSYCFISCDLLNP------LDIKRKLTLLE 94 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~-~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~------~~l~~~~~~~~ 94 (303)
++|||||||||||++|+++|++ ..|++|++++|++..... ...+++++.+|+.|+ +.+.++ +++|
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D 79 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID 79 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence 3799999999999999999983 378999999997543211 125789999999984 345554 7888
Q ss_pred ceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhc-cCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCC
Q 042242 95 DVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPR-AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSK 173 (303)
Q Consensus 95 ~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~ 173 (303)
.|||+++........ .+..+.|+.++.+++++|++. .+++++ +|+..+|+.. ..+..|++...+.
T Consensus 80 ~Vih~Aa~~~~~~~~---~~~~~~nv~gt~~ll~~a~~~~~~~~v~---~SS~~v~g~~--------~~~~~e~~~~~~~ 145 (657)
T PRK07201 80 HVVHLAAIYDLTADE---EAQRAANVDGTRNVVELAERLQAATFHH---VSSIAVAGDY--------EGVFREDDFDEGQ 145 (657)
T ss_pred EEEECceeecCCCCH---HHHHHHHhHHHHHHHHHHHhcCCCeEEE---EeccccccCc--------cCccccccchhhc
Confidence 899998754333222 236899999999999999986 444444 4444466432 1223343322111
Q ss_pred CccchHHHHHHHHHHh-c-CC-cceEEecCCceeecCCCCccch-hhHHHHHHHHhhhCCCc--eeeCCchhhhhhhccc
Q 042242 174 SNNFYYVLEDLLKEKL-A-GK-VAWSVHRPGLLLGSSHRSLYNF-LGCLCVYGAVCKHLNLP--FVFGGTREIWEEYCLD 247 (303)
Q Consensus 174 ~~~~~y~~~k~~~e~~-~-~~-~~~~ilRp~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~ 247 (303)
.+...|+.+|...|.. . .. ++++++||+.|||+........ ......+..+.+....+ +...+.. ....+
T Consensus 146 ~~~~~Y~~sK~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 221 (657)
T PRK07201 146 GLPTPYHRTKFEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPD----GGRTN 221 (657)
T ss_pred CCCCchHHHHHHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCC----CCeee
Confidence 1112288888887732 1 22 9999999999999653211110 00111111111111111 1111111 33457
Q ss_pred CccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 248 GSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 248 ~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
+++++|++.+++.++..+... |++||+++++++|+.|+++.+++.+|.+.
T Consensus 222 ~v~vddva~ai~~~~~~~~~~---g~~~ni~~~~~~s~~el~~~i~~~~g~~~ 271 (657)
T PRK07201 222 IVPVDYVADALDHLMHKDGRD---GQTFHLTDPKPQRVGDIYNAFARAAGAPP 271 (657)
T ss_pred eeeHHHHHHHHHHHhcCcCCC---CCEEEeCCCCCCcHHHHHHHHHHHhCCCc
Confidence 889999999999888765443 48999999999999999999999999876
No 46
>PLN02583 cinnamoyl-CoA reductase
Probab=99.93 E-value=1.8e-24 Score=186.52 Aligned_cols=240 Identities=15% Similarity=0.103 Sum_probs=159.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------c--cCCCeEEEEecCCCHHHHHHHHhccCceeE
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------I--QSSSYCFISCDLLNPLDIKRKLTLLEDVTH 98 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~--~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~ 98 (303)
+++|+|||||||||++++++|+ +.||+|++++|+..... . ...+++++.+|++|.+++.+++.+++.|+|
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll-~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~ 84 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLL-SRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC 84 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHH-hCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 5799999999999999999999 68999999998643211 1 123688899999999999999999988888
Q ss_pred EeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccc-cccCCCcccccCCcCcCCCCCCCC---
Q 042242 99 IFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYV-SLQGLPEEKQVRFYDEECPRVSKS--- 174 (303)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~-~~~~~~g~~~~~~~~e~~~~~p~~--- 174 (303)
++........ ...+.+++|+.++.+++++|.+.. .+.+++++|+...+. .... .+ ...+++|+++..+.+
T Consensus 85 ~~~~~~~~~~--~~~~~~~~nv~gt~~ll~aa~~~~-~v~riV~~SS~~a~~~~~~~-~~--~~~~~~E~~~~~~~~~~~ 158 (297)
T PLN02583 85 CFDPPSDYPS--YDEKMVDVEVRAAHNVLEACAQTD-TIEKVVFTSSLTAVIWRDDN-IS--TQKDVDERSWSDQNFCRK 158 (297)
T ss_pred eCccCCcccc--cHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEecchHheeccccc-CC--CCCCCCcccCCCHHHHhh
Confidence 7543221111 223489999999999999998752 234555555433321 1000 00 123466655432111
Q ss_pred ccchHHHHHHHHHHh-----cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccC
Q 042242 175 NNFYYVLEDLLKEKL-----AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDG 248 (303)
Q Consensus 175 ~~~~y~~~k~~~e~~-----~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 248 (303)
+...|+.+|.+.|.. +.. ++++++||+.|||++..... .. +. +.+...+ .....+
T Consensus 159 ~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~----~~-----~~---~~~~~~~-------~~~~~~ 219 (297)
T PLN02583 159 FKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN----PY-----LK---GAAQMYE-------NGVLVT 219 (297)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch----hh-----hc---CCcccCc-------ccCcce
Confidence 111388888887732 222 99999999999997543211 10 00 1111111 122358
Q ss_pred ccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhc
Q 042242 249 SDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFG 297 (303)
Q Consensus 249 ~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g 297 (303)
+|++|+|++++.+++.+... +.|+++++....+.++++.+.+.+.
T Consensus 220 v~V~Dva~a~~~al~~~~~~----~r~~~~~~~~~~~~~~~~~~~~~~p 264 (297)
T PLN02583 220 VDVNFLVDAHIRAFEDVSSY----GRYLCFNHIVNTEEDAVKLAQMLSP 264 (297)
T ss_pred EEHHHHHHHHHHHhcCcccC----CcEEEecCCCccHHHHHHHHHHhCC
Confidence 99999999999999876443 4798888777778889999988764
No 47
>PLN02996 fatty acyl-CoA reductase
Probab=99.93 E-value=2e-24 Score=197.01 Aligned_cols=261 Identities=13% Similarity=0.092 Sum_probs=168.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhc-CCC-eEEEEecCCcccc----c------------------------cCCCeEEE
Q 042242 27 AKNVAVIFGVTGLVGKELARRLIST-ANW-KVYGIARKPEITA----I------------------------QSSSYCFI 76 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~-~g~-~V~~~~r~~~~~~----~------------------------~~~~~~~~ 76 (303)
.+|+|||||||||||++|++.|++. ... +|+++.|.+.... . ...+++++
T Consensus 10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i 89 (491)
T PLN02996 10 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPV 89 (491)
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEE
Confidence 5789999999999999999999832 233 5899999764211 0 01578999
Q ss_pred EecCC-------CHHHHHHHHhccCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeeccccc
Q 042242 77 SCDLL-------NPLDIKRKLTLLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHY 149 (303)
Q Consensus 77 ~~D~~-------~~~~l~~~~~~~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y 149 (303)
.+|++ +.+.++++++++|.|+|+|+...... +.....+.|+.++.+++++|+.. ..+.++++.|+..+|
T Consensus 90 ~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~---~~~~~~~~Nv~gt~~ll~~a~~~-~~~k~~V~vST~~vy 165 (491)
T PLN02996 90 PGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDE---RYDVALGINTLGALNVLNFAKKC-VKVKMLLHVSTAYVC 165 (491)
T ss_pred ecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcC---CHHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEEeeeEEe
Confidence 99998 44557778888889999987654322 23447899999999999999874 224455555565677
Q ss_pred ccccCCCcccccCCcCcC--------------------------------------------CCC-CCCCccchHHHHHH
Q 042242 150 VSLQGLPEEKQVRFYDEE--------------------------------------------CPR-VSKSNNFYYVLEDL 184 (303)
Q Consensus 150 ~~~~~~~g~~~~~~~~e~--------------------------------------------~~~-~p~~~~~~y~~~k~ 184 (303)
+...... .+.++.+. .+. ....|+ -|+.+|.
T Consensus 166 G~~~~~i---~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn-~Y~~TK~ 241 (491)
T PLN02996 166 GEKSGLI---LEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPN-TYVFTKA 241 (491)
T ss_pred cCCCcee---eeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCC-chHhhHH
Confidence 5432110 01111100 000 001222 2888888
Q ss_pred HHHH-----hcCCcceEEecCCceeecCCCCccchhhHHHHHHH--HhhhCCCceeeCCchhhhhhhcccCccHHHHHHH
Q 042242 185 LKEK-----LAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGA--VCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQ 257 (303)
Q Consensus 185 ~~e~-----~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a 257 (303)
+.|. ..+ ++++++||++|||+.......+...+..... .....+....+.|++ .+..++++++|++.+
T Consensus 242 ~aE~lv~~~~~~-lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg----~~~~D~v~Vddvv~a 316 (491)
T PLN02996 242 MGEMLLGNFKEN-LPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADP----NSVLDVIPADMVVNA 316 (491)
T ss_pred HHHHHHHHhcCC-CCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCC----CeecceecccHHHHH
Confidence 8883 223 9999999999999753221111111110001 111224444444543 677889999999999
Q ss_pred HHHHhcCcCCcCCCCceEEeecC--CCccHHhhHHHHHHHhcccC
Q 042242 258 HIWVATNDDISSTKGQAFNAING--PRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 258 ~~~~~~~~~~~~~~g~~yni~~~--~~~s~~e~~~~i~~~~g~~~ 300 (303)
++.++.........+++||++++ .++|+.|+++.+.+.++.-+
T Consensus 317 ~l~a~~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p 361 (491)
T PLN02996 317 MIVAMAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNP 361 (491)
T ss_pred HHHHHHHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCC
Confidence 99887653110012479999988 78999999999999887544
No 48
>PLN00016 RNA-binding protein; Provisional
Probab=99.93 E-value=1.5e-24 Score=193.05 Aligned_cols=229 Identities=17% Similarity=0.158 Sum_probs=158.3
Q ss_pred CCCCCEEEEE----cCCChhHHHHHHHHhhcCCCeEEEEecCCcccc------------ccCCCeEEEEecCCCHHHHHH
Q 042242 25 VDAKNVAVIF----GVTGLVGKELARRLISTANWKVYGIARKPEITA------------IQSSSYCFISCDLLNPLDIKR 88 (303)
Q Consensus 25 ~~~~~~vlVt----GatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~------------~~~~~~~~~~~D~~~~~~l~~ 88 (303)
..++++|||| |||||||++|+++|+ +.||+|++++|++.... ....+++++.+|+.| +.+
T Consensus 49 ~~~~~~VLVt~~~~GatG~iG~~lv~~L~-~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~ 124 (378)
T PLN00016 49 AVEKKKVLIVNTNSGGHAFIGFYLAKELV-KAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKS 124 (378)
T ss_pred ccccceEEEEeccCCCceeEhHHHHHHHH-HCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHh
Confidence 3456899999 999999999999999 68999999999875421 012358899999987 444
Q ss_pred HH--hccCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCc
Q 042242 89 KL--TLLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 89 ~~--~~~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
++ .++|.|+|++.. +..++.+++++|++.+ +.++++.|+..+|+... ..|..|
T Consensus 125 ~~~~~~~d~Vi~~~~~----------------~~~~~~~ll~aa~~~g--vkr~V~~SS~~vyg~~~-------~~p~~E 179 (378)
T PLN00016 125 KVAGAGFDVVYDNNGK----------------DLDEVEPVADWAKSPG--LKQFLFCSSAGVYKKSD-------EPPHVE 179 (378)
T ss_pred hhccCCccEEEeCCCC----------------CHHHHHHHHHHHHHcC--CCEEEEEccHhhcCCCC-------CCCCCC
Confidence 44 356668887431 1235678999998763 55677766666775431 335666
Q ss_pred CCCCCCCCccchHHHHHHHHHHhcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcc
Q 042242 167 ECPRVSKSNNFYYVLEDLLKEKLAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCL 246 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~e~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 246 (303)
+++..|.. .+...|.++.+ .+ ++++++||+.+||++.... .... .+..+.. +.++.++|.. .+..
T Consensus 180 ~~~~~p~~--sK~~~E~~l~~--~~-l~~~ilRp~~vyG~~~~~~--~~~~--~~~~~~~--~~~i~~~g~g----~~~~ 244 (378)
T PLN00016 180 GDAVKPKA--GHLEVEAYLQK--LG-VNWTSFRPQYIYGPGNNKD--CEEW--FFDRLVR--GRPVPIPGSG----IQLT 244 (378)
T ss_pred CCcCCCcc--hHHHHHHHHHH--cC-CCeEEEeceeEECCCCCCc--hHHH--HHHHHHc--CCceeecCCC----Ceee
Confidence 66544322 23444444432 24 9999999999999754321 1111 1112222 4555555543 4556
Q ss_pred cCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 247 DGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 247 ~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
+++|++|+|++++.++.++...+ ++||+++++.+|+.|+++.+++++|++.
T Consensus 245 ~~i~v~Dva~ai~~~l~~~~~~~---~~yni~~~~~~s~~el~~~i~~~~g~~~ 295 (378)
T PLN00016 245 QLGHVKDLASMFALVVGNPKAAG---QIFNIVSDRAVTFDGMAKACAKAAGFPE 295 (378)
T ss_pred ceecHHHHHHHHHHHhcCccccC---CEEEecCCCccCHHHHHHHHHHHhCCCC
Confidence 78899999999999988765433 8999999999999999999999999865
No 49
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=99.93 E-value=2.9e-24 Score=184.05 Aligned_cols=253 Identities=17% Similarity=0.123 Sum_probs=170.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcC-CCeEEEEecCCcccc--c-----cCCCeEEEEecCCCHHHHHHHHhccCceeEE
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTA-NWKVYGIARKPEITA--I-----QSSSYCFISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~--~-----~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
..+++||||+||+|++|+++|++.. ..+|++++..+.... . ....++++++|+.|...+..+++++ .|+|+
T Consensus 4 ~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh~ 82 (361)
T KOG1430|consen 4 KLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVVHC 82 (361)
T ss_pred CCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEEEe
Confidence 4699999999999999999999433 488999999886422 1 1567899999999999999999999 78888
Q ss_pred eecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchH
Q 042242 100 FWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYY 179 (303)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y 179 (303)
++.........+.....++|+.||.+++++|++.+ +.+++++|+..++.+... ....+|+.|.. ....-.|
T Consensus 83 aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~--v~~lIYtSs~~Vvf~g~~------~~n~~E~~p~p-~~~~d~Y 153 (361)
T KOG1430|consen 83 AASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG--VKRLIYTSSAYVVFGGEP------IINGDESLPYP-LKHIDPY 153 (361)
T ss_pred ccccCccccccchhhheeecchhHHHHHHHHHHhC--CCEEEEecCceEEeCCee------cccCCCCCCCc-ccccccc
Confidence 77766555443444488999999999999999883 455666665545433221 12234444332 2111127
Q ss_pred HHHHHHHH-----HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHH
Q 042242 180 VLEDLLKE-----KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRL 253 (303)
Q Consensus 180 ~~~k~~~e-----~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 253 (303)
..+|..+| ...+. +.++++||+.|||++.......+.. . +.. +.....-|.. ..+.+++.++.
T Consensus 154 ~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~---~--~~~--g~~~f~~g~~----~~~~~~~~~~N 222 (361)
T KOG1430|consen 154 GESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVE---A--LKN--GGFLFKIGDG----ENLNDFTYGEN 222 (361)
T ss_pred chHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHH---H--HHc--cCceEEeecc----ccccceEEech
Confidence 77776666 33234 9999999999999876543222111 1 111 2222223332 34455666666
Q ss_pred HHHHHHHHhcCc--CCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 254 VAEQHIWVATND--DISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 254 ~a~a~~~~~~~~--~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
+|.+++.+...- ......|+.|+|+++.++...+++..+.+.+|.+.|
T Consensus 223 va~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~ 272 (361)
T KOG1430|consen 223 VAWAHILAARALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLP 272 (361)
T ss_pred hHHHHHHHHHHHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCC
Confidence 666666543211 111145799999999998888888899999998876
No 50
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=99.93 E-value=3.3e-24 Score=173.43 Aligned_cols=250 Identities=13% Similarity=0.109 Sum_probs=188.5
Q ss_pred CEEEEEcCCChhHHHHHHHHhh-cCCCeEEEEecCC---c-cc---cccCCCeEEEEecCCCHHHHHHHHhc--cCceeE
Q 042242 29 NVAVIFGVTGLVGKELARRLIS-TANWKVYGIARKP---E-IT---AIQSSSYCFISCDLLNPLDIKRKLTL--LEDVTH 98 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~-~~g~~V~~~~r~~---~-~~---~~~~~~~~~~~~D~~~~~~l~~~~~~--~~~V~~ 98 (303)
++|+||||+||||++.+..+.. -..+..+.++.-. . +. ....++..++++|+.+...+.-.+.. +|.|+|
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih 86 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH 86 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence 7999999999999999999982 2456666665411 1 10 12357899999999999888777754 445999
Q ss_pred EeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccch
Q 042242 99 IFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFY 178 (303)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~ 178 (303)
.|+..+...+.-++.++...|+.++..++++++..+ ++.+++.+|+..+||.+.+ .....|.++..|.+|
T Consensus 87 faa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg-~i~~fvhvSTdeVYGds~~------~~~~~E~s~~nPtnp--- 156 (331)
T KOG0747|consen 87 FAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSG-NIRRFVHVSTDEVYGDSDE------DAVVGEASLLNPTNP--- 156 (331)
T ss_pred hHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhcc-CeeEEEEecccceecCccc------cccccccccCCCCCc---
Confidence 988888877777777899999999999999999764 6788888888889988754 222338888899999
Q ss_pred HHHHHHHHHH-----hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHH
Q 042242 179 YVLEDLLKEK-----LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSR 252 (303)
Q Consensus 179 y~~~k~~~e~-----~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 252 (303)
|+.+|..+|+ .... ++++++|.++||||+... .. .+..|..+... +.+....|.+ .++..+.+++
T Consensus 157 yAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~-~k---lipkFi~l~~~-~~~~~i~g~g----~~~rs~l~ve 227 (331)
T KOG0747|consen 157 YAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYP-EK---LIPKFIKLAMR-GKEYPIHGDG----LQTRSYLYVE 227 (331)
T ss_pred hHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcCh-HH---HhHHHHHHHHh-CCCcceecCc----ccceeeEeHH
Confidence 9999988882 2223 999999999999976542 22 22233333222 4455555555 5667778888
Q ss_pred HHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 253 LVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 253 d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
|+++++-.++... . .|++|||+.+.+++..|+++.+.+.+.+..+
T Consensus 228 D~~ea~~~v~~Kg-~---~geIYNIgtd~e~~~~~l~k~i~eli~~~~~ 272 (331)
T KOG0747|consen 228 DVSEAFKAVLEKG-E---LGEIYNIGTDDEMRVIDLAKDICELFEKRLP 272 (331)
T ss_pred HHHHHHHHHHhcC-C---ccceeeccCcchhhHHHHHHHHHHHHHHhcc
Confidence 8898888887773 2 3499999999999999999999999887554
No 51
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=99.93 E-value=8.1e-24 Score=182.07 Aligned_cols=238 Identities=16% Similarity=0.108 Sum_probs=154.0
Q ss_pred EEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEeeccccc--CC
Q 042242 31 AVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWAS--QF 108 (303)
Q Consensus 31 vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~~--~~ 108 (303)
|||||||||||+++++.|+ +.|++|++++|++.+..... ... ..|+.. ..+.+.+.++|.|+|+++..... ..
T Consensus 1 vlVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~-~~~--~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~~~~~ 75 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLT-KDGHEVTILTRSPPAGANTK-WEG--YKPWAP-LAESEALEGADAVINLAGEPIADKRWT 75 (292)
T ss_pred CEEEcccchhhHHHHHHHH-HcCCEEEEEeCCCCCCCccc-cee--eecccc-cchhhhcCCCCEEEECCCCCcccccCC
Confidence 6999999999999999999 68999999999876532111 011 122222 44556778888899998754322 22
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHH-----HH
Q 042242 109 ASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVL-----ED 183 (303)
Q Consensus 109 ~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~-----~k 183 (303)
.....+.++.|+.++++++++|++.+.+..++++.|+...|+.. ...++.|+.+..+... |.. +.
T Consensus 76 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~-------~~~~~~E~~~~~~~~~---~~~~~~~~e~ 145 (292)
T TIGR01777 76 EERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTS-------EDRVFTEEDSPAGDDF---LAELCRDWEE 145 (292)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCC-------CCCCcCcccCCCCCCh---HHHHHHHHHH
Confidence 23344578899999999999999874332344444444456432 1345777764432222 322 22
Q ss_pred HHHHHhcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhc
Q 042242 184 LLKEKLAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVAT 263 (303)
Q Consensus 184 ~~~e~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~ 263 (303)
.+....+..++++++||+.+||+..+. ...+... .....+.+ .|.. ..+.++++++|+|+++..++.
T Consensus 146 ~~~~~~~~~~~~~ilR~~~v~G~~~~~----~~~~~~~--~~~~~~~~---~g~~----~~~~~~i~v~Dva~~i~~~l~ 212 (292)
T TIGR01777 146 AAQAAEDLGTRVVLLRTGIVLGPKGGA----LAKMLPP--FRLGLGGP---LGSG----RQWFSWIHIEDLVQLILFALE 212 (292)
T ss_pred HhhhchhcCCceEEEeeeeEECCCcch----hHHHHHH--HhcCcccc---cCCC----CcccccEeHHHHHHHHHHHhc
Confidence 222122111999999999999974321 1111111 11111112 1221 566788999999999999987
Q ss_pred CcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 264 NDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 264 ~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
.+... ++||+++++.+|++|+++.|++.+|++.
T Consensus 213 ~~~~~----g~~~~~~~~~~s~~di~~~i~~~~g~~~ 245 (292)
T TIGR01777 213 NASIS----GPVNATAPEPVRNKEFAKALARALHRPA 245 (292)
T ss_pred CcccC----CceEecCCCccCHHHHHHHHHHHhCCCC
Confidence 75432 5899999999999999999999999764
No 52
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.92 E-value=1.1e-23 Score=187.62 Aligned_cols=225 Identities=15% Similarity=0.093 Sum_probs=156.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---------ccCCCeEEEEecCCCHHHHHHHHhc----c
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---------IQSSSYCFISCDLLNPLDIKRKLTL----L 93 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---------~~~~~~~~~~~D~~~~~~l~~~~~~----~ 93 (303)
++++|+|||||||||++++++|+ +.||+|++++|+..+.. ...++++++++|++|.+++.+++++ +
T Consensus 59 ~~~kVLVtGatG~IG~~l~~~Ll-~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~ 137 (390)
T PLN02657 59 KDVTVLVVGATGYIGKFVVRELV-RRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPV 137 (390)
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence 46799999999999999999999 68999999999865321 1135789999999999999999984 6
Q ss_pred CceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCC
Q 042242 94 EDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSK 173 (303)
Q Consensus 94 ~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~ 173 (303)
|.|+|+++..... .. +.+++|+.++.++++++++.+ ..+++++|+..+|. |.
T Consensus 138 D~Vi~~aa~~~~~--~~---~~~~vn~~~~~~ll~aa~~~g--v~r~V~iSS~~v~~---------------------p~ 189 (390)
T PLN02657 138 DVVVSCLASRTGG--VK---DSWKIDYQATKNSLDAGREVG--AKHFVLLSAICVQK---------------------PL 189 (390)
T ss_pred cEEEECCccCCCC--Cc---cchhhHHHHHHHHHHHHHHcC--CCEEEEEeeccccC---------------------cc
Confidence 7788876532211 11 246789999999999998763 34555554432220 11
Q ss_pred CccchHHHHHHHHH--Hhc-CC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCc
Q 042242 174 SNNFYYVLEDLLKE--KLA-GK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGS 249 (303)
Q Consensus 174 ~~~~~y~~~k~~~e--~~~-~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 249 (303)
.+ |...|...| ... .. ++++|+||+.+||... . ....+. .+.++.+.|++. .....++
T Consensus 190 ~~---~~~sK~~~E~~l~~~~~gl~~tIlRp~~~~~~~~--------~--~~~~~~--~g~~~~~~GdG~---~~~~~~I 251 (390)
T PLN02657 190 LE---FQRAKLKFEAELQALDSDFTYSIVRPTAFFKSLG--------G--QVEIVK--DGGPYVMFGDGK---LCACKPI 251 (390)
T ss_pred hH---HHHHHHHHHHHHHhccCCCCEEEEccHHHhcccH--------H--HHHhhc--cCCceEEecCCc---ccccCce
Confidence 12 444444333 111 12 9999999999997311 1 011121 255655555443 2234578
Q ss_pred cHHHHHHHHHHHhcCcCCcCCCCceEEeecC-CCccHHhhHHHHHHHhcccCC
Q 042242 250 DSRLVAEQHIWVATNDDISSTKGQAFNAING-PRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 250 ~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~-~~~s~~e~~~~i~~~~g~~~~ 301 (303)
+++|+|++++.++.++...+ ++||++++ +.+|++|+++.+.+++|+++.
T Consensus 252 ~v~DlA~~i~~~~~~~~~~~---~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~ 301 (390)
T PLN02657 252 SEADLASFIADCVLDESKIN---KVLPIGGPGKALTPLEQGEMLFRILGKEPK 301 (390)
T ss_pred eHHHHHHHHHHHHhCccccC---CEEEcCCCCcccCHHHHHHHHHHHhCCCCc
Confidence 99999999999887665443 89999986 689999999999999998753
No 53
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.92 E-value=6e-23 Score=179.02 Aligned_cols=228 Identities=16% Similarity=0.134 Sum_probs=157.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcC-CCeEEEEecCCcccc-----ccCCCeEEEEecCCCHHHHHHHHhccCceeEEe
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTA-NWKVYGIARKPEITA-----IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIF 100 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~-----~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~ 100 (303)
++|+||||||+||||++++++|++.. +++|++++|+..... ....+++++.+|+.|.+.+.++++++|.|+|++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A 82 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA 82 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence 46899999999999999999999432 378999998765421 112468899999999999999999999999998
Q ss_pred ecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHH
Q 042242 101 WVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYV 180 (303)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~ 180 (303)
+.........++.+.+++|+.++.++++++.+.+ ..+++++|+.. +..|.++ |+
T Consensus 83 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~--~~~iV~~SS~~---------------------~~~p~~~---Y~ 136 (324)
T TIGR03589 83 ALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG--VKRVVALSTDK---------------------AANPINL---YG 136 (324)
T ss_pred ccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEeCCC---------------------CCCCCCH---HH
Confidence 7543332333444689999999999999999763 33555544321 1112344 88
Q ss_pred HHHHHHHHh--------cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCC-ceeeCCchhhhhhhcccCcc
Q 042242 181 LEDLLKEKL--------AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNL-PFVFGGTREIWEEYCLDGSD 250 (303)
Q Consensus 181 ~~k~~~e~~--------~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~ 250 (303)
.+|...|.. ... ++++++||+++||++.. .... +..... .+. ++.+.+ . ....++++
T Consensus 137 ~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~----~i~~---~~~~~~-~~~~~~~i~~-~----~~~r~~i~ 203 (324)
T TIGR03589 137 ATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGS----VVPF---FKSLKE-EGVTELPITD-P----RMTRFWIT 203 (324)
T ss_pred HHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCC----cHHH---HHHHHH-hCCCCeeeCC-C----CceEeeEE
Confidence 888777621 123 99999999999996431 1111 111111 122 233322 1 34456789
Q ss_pred HHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcc
Q 042242 251 SRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGV 298 (303)
Q Consensus 251 ~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~ 298 (303)
++|++++++.++.... ++++| ++.+..+++.|+++.+.+.+..
T Consensus 204 v~D~a~a~~~al~~~~----~~~~~-~~~~~~~sv~el~~~i~~~~~~ 246 (324)
T TIGR03589 204 LEQGVNFVLKSLERML----GGEIF-VPKIPSMKITDLAEAMAPECPH 246 (324)
T ss_pred HHHHHHHHHHHHhhCC----CCCEE-ccCCCcEEHHHHHHHHHhhCCe
Confidence 9999999999887642 23678 4666679999999999987644
No 54
>PLN02778 3,5-epimerase/4-reductase
Probab=99.91 E-value=7.9e-23 Score=175.97 Aligned_cols=225 Identities=15% Similarity=0.007 Sum_probs=148.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHh--ccCceeEEeeccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLT--LLEDVTHIFWVTW 104 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~--~~~~V~~~~~~~~ 104 (303)
+.++||||||+||||++|+++|+ ..|++|+... .|+.|.+.+...++ +.|.|||+|+...
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~-~~g~~V~~~~-----------------~~~~~~~~v~~~l~~~~~D~ViH~Aa~~~ 69 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQ-EQGIDFHYGS-----------------GRLENRASLEADIDAVKPTHVFNAAGVTG 69 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHH-hCCCEEEEec-----------------CccCCHHHHHHHHHhcCCCEEEECCcccC
Confidence 45799999999999999999999 6899987431 34566666777776 4567999987653
Q ss_pred ccC---ChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCC-CcccccCCcCcCCCCCC-CCccchH
Q 042242 105 ASQ---FASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGL-PEEKQVRFYDEECPRVS-KSNNFYY 179 (303)
Q Consensus 105 ~~~---~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~-~g~~~~~~~~e~~~~~p-~~~~~~y 179 (303)
... +..++.+.+++|+.++.+++++|++.+.++ +.+ ++..+|+..... .+ ...++.|+++..+ .++ |
T Consensus 70 ~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~--v~~-sS~~vy~~~~~~p~~--~~~~~~Ee~~p~~~~s~---Y 141 (298)
T PLN02778 70 RPNVDWCESHKVETIRANVVGTLTLADVCRERGLVL--TNY-ATGCIFEYDDAHPLG--SGIGFKEEDTPNFTGSF---Y 141 (298)
T ss_pred CCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCE--EEE-ecceEeCCCCCCCcc--cCCCCCcCCCCCCCCCc---h
Confidence 221 234556689999999999999999874333 222 222355322100 00 1224666655432 355 9
Q ss_pred HHHHHHHHHhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHH
Q 042242 180 VLEDLLKEKLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQH 258 (303)
Q Consensus 180 ~~~k~~~e~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~ 258 (303)
+.+|.+.|..-.. -+..++|++..+|++.....++ ...+.. +.+....+ . ++++++|++.++
T Consensus 142 g~sK~~~E~~~~~y~~~~~lr~~~~~~~~~~~~~~f------i~~~~~--~~~~~~~~------~---s~~yv~D~v~al 204 (298)
T PLN02778 142 SKTKAMVEELLKNYENVCTLRVRMPISSDLSNPRNF------ITKITR--YEKVVNIP------N---SMTILDELLPIS 204 (298)
T ss_pred HHHHHHHHHHHHHhhccEEeeecccCCcccccHHHH------HHHHHc--CCCeeEcC------C---CCEEHHHHHHHH
Confidence 9999999953221 3567899988887532221111 111222 22322222 1 377889999999
Q ss_pred HHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhccc
Q 042242 259 IWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVK 299 (303)
Q Consensus 259 ~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~ 299 (303)
+.++.... + ++||+++++.+|+.|+++.+++.+|.+
T Consensus 205 ~~~l~~~~--~---g~yNigs~~~iS~~el~~~i~~~~~~~ 240 (298)
T PLN02778 205 IEMAKRNL--T---GIYNFTNPGVVSHNEILEMYRDYIDPS 240 (298)
T ss_pred HHHHhCCC--C---CeEEeCCCCcccHHHHHHHHHHHhCCC
Confidence 88876432 1 599999999999999999999999953
No 55
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.91 E-value=1e-22 Score=164.90 Aligned_cols=250 Identities=15% Similarity=0.075 Sum_probs=183.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----------ccCCCeEEEEecCCCHHHHHHHHhccC-
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----------IQSSSYCFISCDLLNPLDIKRKLTLLE- 94 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~~~D~~~~~~l~~~~~~~~- 94 (303)
|+|+.||||.||+-|++|++.|+ +.||+|.++.|+.+... ...++++.+.+|++|...+.++++.+.
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLL-ekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~P 79 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLL-EKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQP 79 (345)
T ss_pred CCceEEEecccCCchHHHHHHHH-hcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCc
Confidence 46899999999999999999999 79999999999865431 122358889999999999999998876
Q ss_pred -ceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCC
Q 042242 95 -DVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSK 173 (303)
Q Consensus 95 -~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~ 173 (303)
.|+|+++.++...+...|....+++..|+.++|++++..+++-.++... ++++.||...+.|..|++|+.|.
T Consensus 80 dEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQA-------StSE~fG~v~~~pq~E~TPFyPr 152 (345)
T COG1089 80 DEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQA-------STSELYGLVQEIPQKETTPFYPR 152 (345)
T ss_pred hhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEec-------ccHHhhcCcccCccccCCCCCCC
Confidence 4999999999999999988888999999999999999876433343333 34445555568899999999999
Q ss_pred CccchHHHHHHHHH-----HhcCC-cceEEecCCceeecCCCCccchhh-HHHHHHH-HhhhCCCceeeCCchhhhhhhc
Q 042242 174 SNNFYYVLEDLLKE-----KLAGK-VAWSVHRPGLLLGSSHRSLYNFLG-CLCVYGA-VCKHLNLPFVFGGTREIWEEYC 245 (303)
Q Consensus 174 ~~~~~y~~~k~~~e-----~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~ 245 (303)
+| |+..|+.+. +-... +-.|.-+.++-=+| ..+..+.. ++....+ +..+.... ..-|+. ...
T Consensus 153 SP---YAvAKlYa~W~tvNYResYgl~AcnGILFNHESP--~Rge~FVTRKIt~ava~Ik~G~q~~-l~lGNl----dAk 222 (345)
T COG1089 153 SP---YAVAKLYAYWITVNYRESYGLFACNGILFNHESP--LRGETFVTRKITRAVARIKLGLQDK-LYLGNL----DAK 222 (345)
T ss_pred CH---HHHHHHHHHheeeehHhhcCceeecceeecCCCC--CCccceehHHHHHHHHHHHccccce-EEeccc----ccc
Confidence 99 999998876 21111 44444443333332 22222222 2332222 44444434 334444 566
Q ss_pred ccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhccc
Q 042242 246 LDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVK 299 (303)
Q Consensus 246 ~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~ 299 (303)
.|+-++.|.++++...++.+.. ..|+++.+++.|++|+++.-.+..|.+
T Consensus 223 RDWG~A~DYVe~mwlmLQq~~P-----ddyViATg~t~sVrefv~~Af~~~g~~ 271 (345)
T COG1089 223 RDWGHAKDYVEAMWLMLQQEEP-----DDYVIATGETHSVREFVELAFEMVGID 271 (345)
T ss_pred ccccchHHHHHHHHHHHccCCC-----CceEEecCceeeHHHHHHHHHHHcCce
Confidence 7788888888877666666543 679999999999999999999999854
No 56
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.89 E-value=2.8e-21 Score=171.46 Aligned_cols=249 Identities=17% Similarity=0.175 Sum_probs=157.4
Q ss_pred EEEEEcCCChhHHHHHHHHhhcCC--CeEEEEecCCcccc----c------------c-C-CCeEEEEecCCCH------
Q 042242 30 VAVIFGVTGLVGKELARRLISTAN--WKVYGIARKPEITA----I------------Q-S-SSYCFISCDLLNP------ 83 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~----~------------~-~-~~~~~~~~D~~~~------ 83 (303)
+|+|||||||||++|+++|+ +.| ++|+++.|..+... . . . .+++++.+|+.++
T Consensus 1 ~vlvtGatG~lG~~l~~~L~-~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~ 79 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELL-RRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSD 79 (367)
T ss_pred CEEEeccchHHHHHHHHHHH-hCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCH
Confidence 58999999999999999999 566 67999999865210 0 0 0 4788999998754
Q ss_pred HHHHHHHhccCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCC
Q 042242 84 LDIKRKLTLLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRF 163 (303)
Q Consensus 84 ~~l~~~~~~~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~ 163 (303)
+.+....+.+|.|+|+++....... . .+..+.|+.++.+++++|.+... .+++++|+..+|+... ..+
T Consensus 80 ~~~~~~~~~~d~vih~a~~~~~~~~-~--~~~~~~nv~g~~~ll~~a~~~~~--~~~v~iSS~~v~~~~~-------~~~ 147 (367)
T TIGR01746 80 AEWERLAENVDTIVHNGALVNWVYP-Y--SELRAANVLGTREVLRLAASGRA--KPLHYVSTISVLAAID-------LST 147 (367)
T ss_pred HHHHHHHhhCCEEEeCCcEeccCCc-H--HHHhhhhhHHHHHHHHHHhhCCC--ceEEEEccccccCCcC-------CCC
Confidence 4566777788889999765432222 2 23678999999999999987632 3344555544553321 111
Q ss_pred cCcCCCCCC--CCccchHHHHHHHHHH-----h-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 164 YDEECPRVS--KSNNFYYVLEDLLKEK-----L-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 164 ~~e~~~~~p--~~~~~~y~~~k~~~e~-----~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
..|+.+..+ ..+...|+.+|...|. . .+ ++++++||+.++|+......+....+..........+. .+
T Consensus 148 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g-~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~---~p 223 (367)
T TIGR01746 148 VTEDDAIVTPPPGLAGGYAQSKWVAELLVREASDRG-LPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGA---YP 223 (367)
T ss_pred ccccccccccccccCCChHHHHHHHHHHHHHHHhcC-CCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCC---CC
Confidence 223322211 1111237887776662 2 24 99999999999996221111110111111111111121 12
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
... ....++++++|+|++++.++..+... ..+++||+++++++++.|+++.+.+ +|++.+
T Consensus 224 ~~~----~~~~~~~~vddva~ai~~~~~~~~~~-~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~ 283 (367)
T TIGR01746 224 DSP----ELTEDLTPVDYVARAIVALSSQPAAS-AGGPVFHVVNPEPVSLDEFLEWLER-AGYNLK 283 (367)
T ss_pred CCC----ccccCcccHHHHHHHHHHHHhCCCcc-cCCceEEecCCCCCCHHHHHHHHHH-cCCCCC
Confidence 211 12345789999999999988766431 1137999999999999999999998 887653
No 57
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.88 E-value=4.3e-22 Score=166.01 Aligned_cols=225 Identities=14% Similarity=0.134 Sum_probs=145.7
Q ss_pred EEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c----cCCCeE----EEEecCCCHHHHHHHHh--ccCc
Q 042242 31 AVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I----QSSSYC----FISCDLLNPLDIKRKLT--LLED 95 (303)
Q Consensus 31 vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~----~~~~~~----~~~~D~~~~~~l~~~~~--~~~~ 95 (303)
||||||+|.||+.|+++|++..-.+|++++|++.+.. . ..+++. .+.+|++|.+.+.++++ +.|.
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 7999999999999999999433356999999976642 1 123454 35889999999999999 6667
Q ss_pred eeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCc
Q 042242 96 VTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSN 175 (303)
Q Consensus 96 V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~ 175 (303)
|+|.|+..+.+.....+.+++++|+.|+.+++++|.+. .+.+++.+|+.+. .+|
T Consensus 81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~--~v~~~v~ISTDKA------------------------v~P 134 (293)
T PF02719_consen 81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH--GVERFVFISTDKA------------------------VNP 134 (293)
T ss_dssp EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT--T-SEEEEEEECGC------------------------SS-
T ss_pred EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEcccccc------------------------CCC
Confidence 99999888777666677779999999999999999987 3667777765433 223
Q ss_pred cchHHHHHHHHHH-----hc---CC-cceEEecCCceeecCCCCccchhhHHHHHHH-HhhhCCCceeeCCchhhhhhhc
Q 042242 176 NFYYVLEDLLKEK-----LA---GK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGA-VCKHLNLPFVFGGTREIWEEYC 245 (303)
Q Consensus 176 ~~~y~~~k~~~e~-----~~---~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~ 245 (303)
...|+.+|.+.|. .. +. .+++++|+|+|.|..+. - ++. |.. +.+ +.|+.+.... .. +.|
T Consensus 135 tnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GS-V---ip~---F~~Qi~~--g~PlTvT~p~-mt-Rff 203 (293)
T PF02719_consen 135 TNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGS-V---IPL---FKKQIKN--GGPLTVTDPD-MT-RFF 203 (293)
T ss_dssp -SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTS-C---HHH---HHHHHHT--TSSEEECETT--E-EEE
T ss_pred CcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCc-H---HHH---HHHHHHc--CCcceeCCCC-cE-EEE
Confidence 3339999999883 11 12 79999999999994322 2 122 222 333 6777664422 11 445
Q ss_pred ccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhccc
Q 042242 246 LDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVK 299 (303)
Q Consensus 246 ~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~ 299 (303)
+. +++.+..++.++... .+|++|.+--++++++.|+++.+.+..|..
T Consensus 204 mt---i~EAv~Lvl~a~~~~----~~geifvl~mg~~v~I~dlA~~~i~~~g~~ 250 (293)
T PF02719_consen 204 MT---IEEAVQLVLQAAALA----KGGEIFVLDMGEPVKILDLAEAMIELSGLE 250 (293)
T ss_dssp E----HHHHHHHHHHHHHH------TTEEEEE---TCEECCCHHHHHHHHTT-E
T ss_pred ec---HHHHHHHHHHHHhhC----CCCcEEEecCCCCcCHHHHHHHHHhhcccc
Confidence 54 444455555554333 345899999999999999999999999864
No 58
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.88 E-value=5.4e-21 Score=169.39 Aligned_cols=231 Identities=15% Similarity=0.151 Sum_probs=170.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---------ccCCCeEEEEecCCCHHHHHHHHhc--cCc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---------IQSSSYCFISCDLLNPLDIKRKLTL--LED 95 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---------~~~~~~~~~~~D~~~~~~l~~~~~~--~~~ 95 (303)
.+|+||||||+|-||+.+++++++.+--+++.++|++.+.. ....++.++.+|+.|.+.+..++++ .|.
T Consensus 249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~ 328 (588)
T COG1086 249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDI 328 (588)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCce
Confidence 57999999999999999999999443345999999886642 1235788899999999999999999 667
Q ss_pred eeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCc
Q 042242 96 VTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSN 175 (303)
Q Consensus 96 V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~ 175 (303)
|+|+|+..+.+....++.+.+++|+.|+.|++++|.+. ++..++.+|+.+. ..|.+-
T Consensus 329 VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~--~V~~~V~iSTDKA---------------------V~PtNv 385 (588)
T COG1086 329 VFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN--GVKKFVLISTDKA---------------------VNPTNV 385 (588)
T ss_pred EEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh--CCCEEEEEecCcc---------------------cCCchH
Confidence 99999998988888889999999999999999999987 3566666665322 122333
Q ss_pred cchHHHHHHHHHH-----hc---C-CcceEEecCCceeecCCCCccchhhHHHHHHH-HhhhCCCceeeCCchhhhhhhc
Q 042242 176 NFYYVLEDLLKEK-----LA---G-KVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGA-VCKHLNLPFVFGGTREIWEEYC 245 (303)
Q Consensus 176 ~~~y~~~k~~~e~-----~~---~-~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~ 245 (303)
|+.+|.+.|. .. + ..+++.+|.|+|.|..+. .+..|.. +.+ |.|+.+.. +..- +.|
T Consensus 386 ---mGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGS-------ViPlFk~QI~~--GgplTvTd-p~mt-Ryf 451 (588)
T COG1086 386 ---MGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGS-------VIPLFKKQIAE--GGPLTVTD-PDMT-RFF 451 (588)
T ss_pred ---hhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCC-------CHHHHHHHHHc--CCCccccC-CCce-eEE
Confidence 8888888872 22 1 178999999999995322 2222322 444 56655433 2222 667
Q ss_pred ccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 246 LDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 246 ~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
+.+.++ ++..+++.... ++|++|-+..|+++++.|+++.+-+..|..++
T Consensus 452 MTI~EA---v~LVlqA~a~~----~gGeifvldMGepvkI~dLAk~mi~l~g~~~~ 500 (588)
T COG1086 452 MTIPEA---VQLVLQAGAIA----KGGEIFVLDMGEPVKIIDLAKAMIELAGQTPP 500 (588)
T ss_pred EEHHHH---HHHHHHHHhhc----CCCcEEEEcCCCCeEHHHHHHHHHHHhCCCCC
Confidence 766666 44444443332 45799999999999999999999999984443
No 59
>PLN02503 fatty acyl-CoA reductase 2
Probab=99.88 E-value=6.8e-21 Score=175.38 Aligned_cols=256 Identities=11% Similarity=0.092 Sum_probs=161.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhc-CC-CeEEEEecCCcccc----c------------------------cCCCeEEE
Q 042242 27 AKNVAVIFGVTGLVGKELARRLIST-AN-WKVYGIARKPEITA----I------------------------QSSSYCFI 76 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~-~g-~~V~~~~r~~~~~~----~------------------------~~~~~~~~ 76 (303)
.+++|||||||||||++|++.|++. .+ -+|+++.|.+.... . ...++.++
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v 197 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV 197 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence 4689999999999999999999932 22 26899999654310 0 02468889
Q ss_pred EecCCCH------HHHHHHHhccCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccc
Q 042242 77 SCDLLNP------LDIKRKLTLLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYV 150 (303)
Q Consensus 77 ~~D~~~~------~~l~~~~~~~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~ 150 (303)
.+|++++ +..+.+.+.+|.|+|+|+...... +....+++|+.++.+++++|+.. ..+.++++.|+..+|+
T Consensus 198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~---~~~~a~~vNV~GT~nLLelA~~~-~~lk~fV~vSTayVyG 273 (605)
T PLN02503 198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDE---RYDVAIDINTRGPCHLMSFAKKC-KKLKLFLQVSTAYVNG 273 (605)
T ss_pred EeeCCCcccCCCHHHHHHHHhcCCEEEECcccccccc---CHHHHHHHHHHHHHHHHHHHHHc-CCCCeEEEccCceeec
Confidence 9999987 355666677888999987654322 23347899999999999999875 2345566666666775
Q ss_pred cccCCCcccccCCcCcC---------------------------------C-C------------------CCCCCccch
Q 042242 151 SLQGLPEEKQVRFYDEE---------------------------------C-P------------------RVSKSNNFY 178 (303)
Q Consensus 151 ~~~~~~g~~~~~~~~e~---------------------------------~-~------------------~~p~~~~~~ 178 (303)
....... +.++... . + .....|++
T Consensus 274 ~~~G~i~---E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNt- 349 (605)
T PLN02503 274 QRQGRIM---EKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDT- 349 (605)
T ss_pred CCCCeee---eeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCCh-
Confidence 5421111 1111100 0 0 01122333
Q ss_pred HHHHHHHHHHh---cCC-cceEEecCCceeec----CCCCccc--hhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccC
Q 042242 179 YVLEDLLKEKL---AGK-VAWSVHRPGLLLGS----SHRSLYN--FLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDG 248 (303)
Q Consensus 179 y~~~k~~~e~~---~~~-~~~~ilRp~~v~G~----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 248 (303)
|..+|.++|.. ... ++++|+||+.|.+. -+++..+ ........ .. .|.-..+.++. ....++
T Consensus 350 Yt~TK~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~--~g--~G~lr~~~~~~----~~~~Di 421 (605)
T PLN02503 350 YVFTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLY--YG--KGQLTGFLADP----NGVLDV 421 (605)
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhh--ee--ccceeEEEeCC----CeeEeE
Confidence 78888888832 222 99999999999441 1111111 11111111 11 23322344433 678899
Q ss_pred ccHHHHHHHHHHHhcC-cCCcCCCCceEEeecC--CCccHHhhHHHHHHHhcc
Q 042242 249 SDSRLVAEQHIWVATN-DDISSTKGQAFNAING--PRFTWKEIWPSIGKKFGV 298 (303)
Q Consensus 249 ~~~~d~a~a~~~~~~~-~~~~~~~g~~yni~~~--~~~s~~e~~~~i~~~~g~ 298 (303)
+.+|.++.+++.++.. .......+.+||++++ .+++|+++++.+.+.+..
T Consensus 422 VPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~ 474 (605)
T PLN02503 422 VPADMVVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS 474 (605)
T ss_pred EeecHHHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence 9999999999888432 1111023589999988 799999999999887754
No 60
>PRK05865 hypothetical protein; Provisional
Probab=99.88 E-value=3.3e-21 Score=182.95 Aligned_cols=201 Identities=21% Similarity=0.309 Sum_probs=146.9
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEeecccccCC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWASQF 108 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~~~~ 108 (303)
|+|+|||||||||++++++|+ ..|++|++++|+..... ..+++++.+|+.|.+.+.++++++|.|+|+++....
T Consensus 1 MkILVTGATGfIGs~La~~Ll-~~G~~Vv~l~R~~~~~~--~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~--- 74 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLL-SQGHEVVGIARHRPDSW--PSSADFIAADIRDATAVESAMTGADVVAHCAWVRGR--- 74 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCcCEEEEEECCchhhc--ccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcccc---
Confidence 479999999999999999999 68999999999754321 236888999999999999999999999999754211
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHHH
Q 042242 109 ASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKEK 188 (303)
Q Consensus 109 ~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e~ 188 (303)
.+++|+.++.+++++|++.+ ..++++.|+. . +...|+++.+
T Consensus 75 ------~~~vNv~GT~nLLeAa~~~g--vkr~V~iSS~--------------~----------------K~aaE~ll~~- 115 (854)
T PRK05865 75 ------NDHINIDGTANVLKAMAETG--TGRIVFTSSG--------------H----------------QPRVEQMLAD- 115 (854)
T ss_pred ------hHHHHHHHHHHHHHHHHHcC--CCeEEEECCc--------------H----------------HHHHHHHHHH-
Confidence 46889999999999998763 3345444421 0 1444555533
Q ss_pred hcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCc
Q 042242 189 LAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDIS 268 (303)
Q Consensus 189 ~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~ 268 (303)
.+ ++++++||+++||++.. +++.. + ...+....|+. ....+++|++|+|++++.++..+...
T Consensus 116 -~g-l~~vILRp~~VYGP~~~---~~i~~------l---l~~~v~~~G~~----~~~~dfIhVdDVA~Ai~~aL~~~~~~ 177 (854)
T PRK05865 116 -CG-LEWVAVRCALIFGRNVD---NWVQR------L---FALPVLPAGYA----DRVVQVVHSDDAQRLLVRALLDTVID 177 (854)
T ss_pred -cC-CCEEEEEeceEeCCChH---HHHHH------H---hcCceeccCCC----CceEeeeeHHHHHHHHHHHHhCCCcC
Confidence 24 99999999999996411 11111 1 12233333332 34567899999999999887654333
Q ss_pred CCCCceEEeecCCCccHHhhHHHHHHH
Q 042242 269 STKGQAFNAINGPRFTWKEIWPSIGKK 295 (303)
Q Consensus 269 ~~~g~~yni~~~~~~s~~e~~~~i~~~ 295 (303)
+++||+++++.+|++|+++.+.+.
T Consensus 178 ---ggvyNIgsg~~~Si~EIae~l~~~ 201 (854)
T PRK05865 178 ---SGPVNLAAPGELTFRRIAAALGRP 201 (854)
T ss_pred ---CCeEEEECCCcccHHHHHHHHhhh
Confidence 368999999999999999999874
No 61
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=99.87 E-value=7.2e-21 Score=163.24 Aligned_cols=211 Identities=12% Similarity=0.094 Sum_probs=142.4
Q ss_pred EEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHH------hc-cCceeEEeec
Q 042242 30 VAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKL------TL-LEDVTHIFWV 102 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~------~~-~~~V~~~~~~ 102 (303)
+|+||||||+||++++++|+ +.|++|++++|++.+.. ..+++.+.+|+.|++++..++ ++ +|.|+|+...
T Consensus 1 ~ilVtGatG~iG~~vv~~L~-~~g~~V~~~~R~~~~~~--~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~ 77 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQ-AASVPFLVASRSSSSSA--GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPP 77 (285)
T ss_pred CEEEEcCCChHHHHHHHHHH-hCCCcEEEEeCCCcccc--CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCC
Confidence 48999999999999999999 68999999999986532 357778899999999999999 45 6767776432
Q ss_pred ccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHH
Q 042242 103 TWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLE 182 (303)
Q Consensus 103 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~ 182 (303)
.. .. .....++++++++.+ ++++++.|+...+. . . ... ...+
T Consensus 78 ~~---~~----------~~~~~~~i~aa~~~g--v~~~V~~Ss~~~~~----------~------~----~~~---~~~~ 119 (285)
T TIGR03649 78 IP---DL----------APPMIKFIDFARSKG--VRRFVLLSASIIEK----------G------G----PAM---GQVH 119 (285)
T ss_pred CC---Ch----------hHHHHHHHHHHHHcC--CCEEEEeeccccCC----------C------C----chH---HHHH
Confidence 11 11 123457888888763 45666655421110 0 0 000 1223
Q ss_pred HHHHHHhcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHh
Q 042242 183 DLLKEKLAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVA 262 (303)
Q Consensus 183 k~~~e~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~ 262 (303)
+++.+. .+ ++++++||+.+++.... .. .... +. . ..++..+ .. ...+.+++++|+|++++.++
T Consensus 120 ~~l~~~-~g-i~~tilRp~~f~~~~~~-~~-~~~~------~~-~-~~~~~~~-~g----~~~~~~v~~~Dva~~~~~~l 182 (285)
T TIGR03649 120 AHLDSL-GG-VEYTVLRPTWFMENFSE-EF-HVEA------IR-K-ENKIYSA-TG----DGKIPFVSADDIARVAYRAL 182 (285)
T ss_pred HHHHhc-cC-CCEEEEeccHHhhhhcc-cc-cccc------cc-c-CCeEEec-CC----CCccCcccHHHHHHHHHHHh
Confidence 333322 24 99999999998863211 00 0000 11 1 1222222 11 44567999999999999988
Q ss_pred cCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 263 TNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 263 ~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
..+...+ +.|++++++.+|+.|+++.+++++|++.+
T Consensus 183 ~~~~~~~---~~~~l~g~~~~s~~eia~~l~~~~g~~v~ 218 (285)
T TIGR03649 183 TDKVAPN---TDYVVLGPELLTYDDVAEILSRVLGRKIT 218 (285)
T ss_pred cCCCcCC---CeEEeeCCccCCHHHHHHHHHHHhCCceE
Confidence 8765443 78999999999999999999999999865
No 62
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=99.86 E-value=1.3e-20 Score=152.61 Aligned_cols=233 Identities=17% Similarity=0.157 Sum_probs=170.3
Q ss_pred cCCcCCCCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc------ccCCCeEEEEecCCCHHHHHHHHhc
Q 042242 19 VNRGREVDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA------IQSSSYCFISCDLLNPLDIKRKLTL 92 (303)
Q Consensus 19 ~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~D~~~~~~l~~~~~~ 92 (303)
-+..+++.++..+-|+|||||+|++++++|. +.|-+|++--|..+... -+..++-+...|+.|.++++++++.
T Consensus 52 GtGGRsS~sGiVaTVFGAtGFlGryvvnkla-k~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~ 130 (391)
T KOG2865|consen 52 GTGGRSSVSGIVATVFGATGFLGRYVVNKLA-KMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKH 130 (391)
T ss_pred CCCCcccccceEEEEecccccccHHHHHHHh-hcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHh
Confidence 3456667777899999999999999999998 68889999988655422 1234677889999999999999999
Q ss_pred cCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhc-cCCccEEEEeecccccccccCCCcccccCCcCcCCCCC
Q 042242 93 LEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPR-AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRV 171 (303)
Q Consensus 93 ~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~ 171 (303)
.++||++.+..+...+.. +.++|+.+.+++...|++. ..+++|+|..... +
T Consensus 131 sNVVINLIGrd~eTknf~----f~Dvn~~~aerlAricke~GVerfIhvS~Lgan-----------------v------- 182 (391)
T KOG2865|consen 131 SNVVINLIGRDYETKNFS----FEDVNVHIAERLARICKEAGVERFIHVSCLGAN-----------------V------- 182 (391)
T ss_pred CcEEEEeeccccccCCcc----cccccchHHHHHHHHHHhhChhheeehhhcccc-----------------c-------
Confidence 999999988776655544 5689999999999999998 5567776544310 0
Q ss_pred CCCccchHHHHHHHHHHhcC-C-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCC-CceeeCCchhhhhhhcccC
Q 042242 172 SKSNNFYYVLEDLLKEKLAG-K-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLN-LPFVFGGTREIWEEYCLDG 248 (303)
Q Consensus 172 p~~~~~~y~~~k~~~e~~~~-~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~ 248 (303)
.++ +.|-.+|.+.|..-. . -..+|+||+.|||..++ -+..|..+.++.+ .|+.-.| | ....+.
T Consensus 183 -~s~-Sr~LrsK~~gE~aVrdafPeAtIirPa~iyG~eDr-------fln~ya~~~rk~~~~pL~~~G----e-kT~K~P 248 (391)
T KOG2865|consen 183 -KSP-SRMLRSKAAGEEAVRDAFPEATIIRPADIYGTEDR-------FLNYYASFWRKFGFLPLIGKG----E-KTVKQP 248 (391)
T ss_pred -cCh-HHHHHhhhhhHHHHHhhCCcceeechhhhcccchh-------HHHHHHHHHHhcCceeeecCC----c-ceeecc
Confidence 111 114556666664322 2 56899999999994322 2333444444332 2333233 2 566677
Q ss_pred ccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhc
Q 042242 249 SDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFG 297 (303)
Q Consensus 249 ~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g 297 (303)
+.+.|+|.+++.++.+|+..| .+|..++++..++.|+++.+-+...
T Consensus 249 VyV~DVaa~IvnAvkDp~s~G---ktye~vGP~~yql~eLvd~my~~~~ 294 (391)
T KOG2865|consen 249 VYVVDVAAAIVNAVKDPDSMG---KTYEFVGPDRYQLSELVDIMYDMAR 294 (391)
T ss_pred EEEehHHHHHHHhccCccccC---ceeeecCCchhhHHHHHHHHHHHHh
Confidence 888888999999999998765 9999999999999999999876554
No 63
>PRK12320 hypothetical protein; Provisional
Probab=99.85 E-value=7.4e-20 Score=170.43 Aligned_cols=202 Identities=15% Similarity=0.108 Sum_probs=137.8
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEeecccccCC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWASQF 108 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~~~~ 108 (303)
|+||||||+||||++|+++|+ +.||+|++++|.+... ..++++++.+|+.+.. +.+.++++|.|+|+++...
T Consensus 1 MkILVTGAaGFIGs~La~~Ll-~~G~~Vi~ldr~~~~~--~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~---- 72 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLI-AAGHTVSGIAQHPHDA--LDPRVDYVCASLRNPV-LQELAGEADAVIHLAPVDT---- 72 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHH-hCCCEEEEEeCChhhc--ccCCceEEEccCCCHH-HHHHhcCCCEEEEcCccCc----
Confidence 379999999999999999999 6899999999976432 2357889999999985 7788888888999986421
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHHH
Q 042242 109 ASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKEK 188 (303)
Q Consensus 109 ~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e~ 188 (303)
.. ....|+.++.+++++|++.+.+ +++.|+. |+.+ . .+ ...|.++..
T Consensus 73 -~~---~~~vNv~Gt~nLleAA~~~GvR---iV~~SS~--~G~~-----------------~--~~----~~aE~ll~~- 119 (699)
T PRK12320 73 -SA---PGGVGITGLAHVANAAARAGAR---LLFVSQA--AGRP-----------------E--LY----RQAETLVST- 119 (699)
T ss_pred -cc---hhhHHHHHHHHHHHHHHHcCCe---EEEEECC--CCCC-----------------c--cc----cHHHHHHHh-
Confidence 11 2358999999999999987543 3344432 2110 0 01 123333332
Q ss_pred hcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCc
Q 042242 189 LAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDIS 268 (303)
Q Consensus 189 ~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~ 268 (303)
.. ++++++|++++||++.... ....+..+.. ....+.+ +.+++++|++++++.++..+.
T Consensus 120 -~~-~p~~ILR~~nVYGp~~~~~--~~r~I~~~l~-~~~~~~p--------------I~vIyVdDvv~alv~al~~~~-- 178 (699)
T PRK12320 120 -GW-APSLVIRIAPPVGRQLDWM--VCRTVATLLR-SKVSARP--------------IRVLHLDDLVRFLVLALNTDR-- 178 (699)
T ss_pred -cC-CCEEEEeCceecCCCCccc--HhHHHHHHHH-HHHcCCc--------------eEEEEHHHHHHHHHHHHhCCC--
Confidence 13 8999999999999643211 1111111111 0001112 224799999999988886532
Q ss_pred CCCCceEEeecCCCccHHhhHHHHHHH
Q 042242 269 STKGQAFNAINGPRFTWKEIWPSIGKK 295 (303)
Q Consensus 269 ~~~g~~yni~~~~~~s~~e~~~~i~~~ 295 (303)
. ++|||++++.+|+.|+++.++..
T Consensus 179 --~-GiyNIG~~~~~Si~el~~~i~~~ 202 (699)
T PRK12320 179 --N-GVVDLATPDTTNVVTAWRLLRSV 202 (699)
T ss_pred --C-CEEEEeCCCeeEHHHHHHHHHHh
Confidence 1 49999999999999999988765
No 64
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.85 E-value=6.7e-20 Score=174.64 Aligned_cols=224 Identities=14% Similarity=0.002 Sum_probs=146.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhc--cCceeEEeeccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTL--LEDVTHIFWVTW 104 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~--~~~V~~~~~~~~ 104 (303)
+.++||||||+||||++|++.|. ..|++|.. ..+|++|.+.+...++. .|.|||+|+...
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~-~~g~~v~~-----------------~~~~l~d~~~v~~~i~~~~pd~Vih~Aa~~~ 440 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCE-KQGIAYEY-----------------GKGRLEDRSSLLADIRNVKPTHVFNAAGVTG 440 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHH-hCCCeEEe-----------------eccccccHHHHHHHHHhhCCCEEEECCcccC
Confidence 45689999999999999999998 57888731 12467888888888874 456999987643
Q ss_pred ---ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCC-CCccchHH
Q 042242 105 ---ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVS-KSNNFYYV 180 (303)
Q Consensus 105 ---~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p-~~~~~~y~ 180 (303)
.+.+..++.+.+++|+.++.+++++|++.+.++.++ |+..+|+....... ....|+.|+++..| .++ |+
T Consensus 441 ~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~~v~~---Ss~~v~~~~~~~~~-~~~~p~~E~~~~~~~~~~---Yg 513 (668)
T PLN02260 441 RPNVDWCESHKVETIRANVVGTLTLADVCRENGLLMMNF---ATGCIFEYDAKHPE-GSGIGFKEEDKPNFTGSF---YS 513 (668)
T ss_pred CCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCeEEEE---cccceecCCccccc-ccCCCCCcCCCCCCCCCh---hh
Confidence 222334556689999999999999999875443333 23335532110000 01246777765543 356 99
Q ss_pred HHHHHHHHhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHH
Q 042242 181 LEDLLKEKLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHI 259 (303)
Q Consensus 181 ~~k~~~e~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~ 259 (303)
.+|...|..-.. -+..++|+.++||.......++...+ .+. ..++.++. +..++++++.+++
T Consensus 514 ~sK~~~E~~~~~~~~~~~~r~~~~~~~~~~~~~nfv~~~------~~~-~~~~~vp~----------~~~~~~~~~~~~~ 576 (668)
T PLN02260 514 KTKAMVEELLREYDNVCTLRVRMPISSDLSNPRNFITKI------SRY-NKVVNIPN----------SMTVLDELLPISI 576 (668)
T ss_pred HHHHHHHHHHHhhhhheEEEEEEecccCCCCccHHHHHH------hcc-ceeeccCC----------CceehhhHHHHHH
Confidence 999999854322 46788899999975433232333221 111 22223332 2445666776666
Q ss_pred HHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhc
Q 042242 260 WVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFG 297 (303)
Q Consensus 260 ~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g 297 (303)
.++..+ . +++||+++++.+||.|+++.|++.++
T Consensus 577 ~l~~~~-~----~giyni~~~~~~s~~e~a~~i~~~~~ 609 (668)
T PLN02260 577 EMAKRN-L----RGIWNFTNPGVVSHNEILEMYKDYID 609 (668)
T ss_pred HHHHhC-C----CceEEecCCCcCcHHHHHHHHHHhcC
Confidence 666532 1 26999999999999999999999874
No 65
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=99.83 E-value=2.7e-19 Score=140.39 Aligned_cols=241 Identities=16% Similarity=0.086 Sum_probs=159.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCC--e-EEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccC--ceeEEeec
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANW--K-VYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLE--DVTHIFWV 102 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~--~-V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~--~V~~~~~~ 102 (303)
+++|||||++|++|++|.+.+. ..+. + ..... .-.+|+++.++.+..|...+ .|||+|+.
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~-~q~~~~e~wvf~~--------------skd~DLt~~a~t~~lF~~ekPthVIhlAAm 65 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQ-EQGFDDENWVFIG--------------SKDADLTNLADTRALFESEKPTHVIHLAAM 65 (315)
T ss_pred CceEEEecCCchHHHHHHHHHH-hcCCCCcceEEec--------------cccccccchHHHHHHHhccCCceeeehHhh
Confidence 3799999999999999999998 4553 1 11111 11379999999999998776 49999654
Q ss_pred cc-ccCChHHHHHHHHHHHHHHHHHHHHHhhcc-CCccEEEEeecccccccccCCCcccccCCcCcCCCCC-CCCc-cch
Q 042242 103 TW-ASQFASDMHKCCEQNKAMMCNALNAILPRA-KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRV-SKSN-NFY 178 (303)
Q Consensus 103 ~~-~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~-p~~~-~~~ 178 (303)
.. ...+...+.++++.|+..-.|++..|-+.+ .++.... +...| .++...|++|..... |..| ++.
T Consensus 66 VGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vscl---StCIf-------Pdkt~yPIdEtmvh~gpphpsN~g 135 (315)
T KOG1431|consen 66 VGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCL---STCIF-------PDKTSYPIDETMVHNGPPHPSNFG 135 (315)
T ss_pred hcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhc---ceeec-------CCCCCCCCCHHHhccCCCCCCchH
Confidence 32 122222334589999999999999998873 3332221 22233 222356788877543 3333 566
Q ss_pred HHHHHHHHH-----HhcCC-cceEEecCCceeecCCCCcc-c--hhhHHHHHHHHhhhCCC-ceeeCCchhhhhhhcccC
Q 042242 179 YVLEDLLKE-----KLAGK-VAWSVHRPGLLLGSSHRSLY-N--FLGCLCVYGAVCKHLNL-PFVFGGTREIWEEYCLDG 248 (303)
Q Consensus 179 y~~~k~~~e-----~~~~~-~~~~ilRp~~v~G~~~~~~~-~--~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~ 248 (303)
|+..|.+.. +.... ..++.+-|.++|||.++... + .++.+....-..+..+. ++...|++. .+..+
T Consensus 136 YsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~----PlRqF 211 (315)
T KOG1431|consen 136 YSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGS----PLRQF 211 (315)
T ss_pred HHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCC----hHHHH
Confidence 887775443 22222 89999999999997655221 1 23333322223333344 677777764 44456
Q ss_pred ccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC--CccHHhhHHHHHHHhcccCC
Q 042242 249 SDSRLVAEQHIWVATNDDISSTKGQAFNAINGP--RFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 249 ~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~--~~s~~e~~~~i~~~~g~~~~ 301 (303)
++.+|+|+++++++..-+.. +..+++.++ .+|++|+++++.+++|+...
T Consensus 212 iys~DLA~l~i~vlr~Y~~v----Epiils~ge~~EVtI~e~aeaV~ea~~F~G~ 262 (315)
T KOG1431|consen 212 IYSDDLADLFIWVLREYEGV----EPIILSVGESDEVTIREAAEAVVEAVDFTGK 262 (315)
T ss_pred hhHhHHHHHHHHHHHhhcCc----cceEeccCccceeEHHHHHHHHHHHhCCCce
Confidence 66778899999998776443 678888777 89999999999999988653
No 66
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.82 E-value=5.5e-19 Score=141.56 Aligned_cols=181 Identities=23% Similarity=0.330 Sum_probs=123.8
Q ss_pred EEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEeecccccCChH
Q 042242 31 AVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWASQFAS 110 (303)
Q Consensus 31 vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~~~~~~ 110 (303)
|+|+||||++|++++++|+ +.|++|++++|++.+... .++++++++|+.|.+++.++++++|.|+++++....
T Consensus 1 I~V~GatG~vG~~l~~~L~-~~~~~V~~~~R~~~~~~~-~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~----- 73 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLL-RRGHEVTALVRSPSKAED-SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK----- 73 (183)
T ss_dssp EEEETTTSHHHHHHHHHHH-HTTSEEEEEESSGGGHHH-CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT-----
T ss_pred eEEECCCChHHHHHHHHHH-HCCCEEEEEecCchhccc-ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcc-----
Confidence 7999999999999999999 678999999999886544 789999999999999999999999988888754222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHH-Hh
Q 042242 111 DMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE-KL 189 (303)
Q Consensus 111 ~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e-~~ 189 (303)
....+.++++++++.+ ..+++++|+...|..... ......... +.. |...+...+ ..
T Consensus 74 --------~~~~~~~~~~a~~~~~--~~~~v~~s~~~~~~~~~~--------~~~~~~~~~---~~~-~~~~~~~~e~~~ 131 (183)
T PF13460_consen 74 --------DVDAAKNIIEAAKKAG--VKRVVYLSSAGVYRDPPG--------LFSDEDKPI---FPE-YARDKREAEEAL 131 (183)
T ss_dssp --------HHHHHHHHHHHHHHTT--SSEEEEEEETTGTTTCTS--------EEEGGTCGG---GHH-HHHHHHHHHHHH
T ss_pred --------cccccccccccccccc--cccceeeeccccCCCCCc--------ccccccccc---hhh-hHHHHHHHHHHH
Confidence 1566778999998863 557777776656643211 111111110 111 333333333 11
Q ss_pred cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcC
Q 042242 190 AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATN 264 (303)
Q Consensus 190 ~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~ 264 (303)
+.. ++|+++||+.+||.... .. . +...+. ......++.+|+|++++.++.+
T Consensus 132 ~~~~~~~~ivrp~~~~~~~~~-~~----~--------------~~~~~~-----~~~~~~i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 132 RESGLNWTIVRPGWIYGNPSR-SY----R--------------LIKEGG-----PQGVNFISREDVAKAIVEALEN 183 (183)
T ss_dssp HHSTSEEEEEEESEEEBTTSS-SE----E--------------EESSTS-----TTSHCEEEHHHHHHHHHHHHH-
T ss_pred HhcCCCEEEEECcEeEeCCCc-ce----e--------------EEeccC-----CCCcCcCCHHHHHHHHHHHhCC
Confidence 222 99999999999996422 11 1 111111 2334688999999999988753
No 67
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.81 E-value=5.1e-18 Score=144.90 Aligned_cols=230 Identities=12% Similarity=0.087 Sum_probs=145.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHhc-------cCc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLTL-------LED 95 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~~-------~~~ 95 (303)
|.|+||||||+|+||++++++|+ +.|++|++++|++.... ....++.++++|++|.+++.+.++. +|.
T Consensus 1 m~k~vlVtGasg~IG~~la~~L~-~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 79 (276)
T PRK06482 1 MSKTWFITGASSGFGRGMTERLL-ARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDV 79 (276)
T ss_pred CCCEEEEecCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 45799999999999999999999 68999999999865432 1124688899999999988877654 466
Q ss_pred eeEEeecccccC----ChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCC
Q 042242 96 VTHIFWVTWASQ----FASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECP 169 (303)
Q Consensus 96 V~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~ 169 (303)
|+|+++...... +.....+.+++|+.++.++++++... .....+++.+|+...+ .+. +
T Consensus 80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~------------~~~----~ 143 (276)
T PRK06482 80 VVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQ------------IAY----P 143 (276)
T ss_pred EEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccc------------cCC----C
Confidence 889876543221 23344457889999999999997443 1122345444432111 000 0
Q ss_pred CCCCCccchHHHHHHHHH-----Hh---cCC-cceEEecCCce---eecCCCCc--cchh--hHHHHHHHHhhhCCCcee
Q 042242 170 RVSKSNNFYYVLEDLLKE-----KL---AGK-VAWSVHRPGLL---LGSSHRSL--YNFL--GCLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 170 ~~p~~~~~~y~~~k~~~e-----~~---~~~-~~~~ilRp~~v---~G~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~ 233 (303)
+..+ |+.+|...+ +. ... ++++++||+.+ ||.+.... .... .....+..... .
T Consensus 144 --~~~~---Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---- 212 (276)
T PRK06482 144 --GFSL---YHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALA--D---- 212 (276)
T ss_pred --CCch---hHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHh--h----
Confidence 1233 777766544 11 112 99999999988 55322111 0000 00001111000 0
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhc
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFG 297 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g 297 (303)
+ .+.-..|++|++.+++.++..+.. +..||++++...+..|+++.+.+.++
T Consensus 213 --~-------~~~~~~d~~~~~~a~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~ 263 (276)
T PRK06482 213 --G-------SFAIPGDPQKMVQAMIASADQTPA----PRRLTLGSDAYASIRAALSERLAALE 263 (276)
T ss_pred --c-------cCCCCCCHHHHHHHHHHHHcCCCC----CeEEecChHHHHHHHHHHHHHHHHHH
Confidence 1 011135889999999998875532 36799999998899888887777664
No 68
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=99.80 E-value=5.4e-19 Score=148.48 Aligned_cols=211 Identities=18% Similarity=0.160 Sum_probs=105.8
Q ss_pred EEcCCChhHHHHHHHHhhcCC-CeEEEEecCCcccc-----------------c---cCCCeEEEEecCCCH------HH
Q 042242 33 IFGVTGLVGKELARRLISTAN-WKVYGIARKPEITA-----------------I---QSSSYCFISCDLLNP------LD 85 (303)
Q Consensus 33 VtGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~-----------------~---~~~~~~~~~~D~~~~------~~ 85 (303)
|||||||+|++|+++|++... .+|+++.|.+.... . ...+++++.+|++++ +.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999994332 38999999874410 0 157899999999985 45
Q ss_pred HHHHHhccCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhc-cCCccEEEEeecccccccccCCCcccccCC-
Q 042242 86 IKRKLTLLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPR-AKALKHVSLQTGMKHYVSLQGLPEEKQVRF- 163 (303)
Q Consensus 86 l~~~~~~~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~- 163 (303)
+..+.+.++.|+|+|+......+..+ +.+.|+.|+.++++.|... .++++++|+ ..+.+...... .+..
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~---~~~~NV~gt~~ll~la~~~~~~~~~~iST---a~v~~~~~~~~---~~~~~ 151 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVNFNAPYSE---LRAVNVDGTRNLLRLAAQGKRKRFHYIST---AYVAGSRPGTI---EEKVY 151 (249)
T ss_dssp HHHHHHH--EEEE--SS-SBS-S--E---EHHHHHHHHHHHHHHHTSSS---EEEEEE---GGGTTS-TTT-----SSS-
T ss_pred hhccccccceeeecchhhhhcccchh---hhhhHHHHHHHHHHHHHhccCcceEEecc---ccccCCCCCcc---ccccc
Confidence 66677888999999776544433333 6799999999999999954 334444444 21221111000 0000
Q ss_pred -cCcCCCCCCCCccchHHHHHHHHHH-----h-c-CCcceEEecCCceeecCCCCccchhh-HHHHHHHHhhhCCCceee
Q 042242 164 -YDEECPRVSKSNNFYYVLEDLLKEK-----L-A-GKVAWSVHRPGLLLGSSHRSLYNFLG-CLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 164 -~~e~~~~~p~~~~~~y~~~k~~~e~-----~-~-~~~~~~ilRp~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 234 (303)
..+.....+......|..+|++.|. . + + ++++|+||+.|+|.......+... .......... .+.....
T Consensus 152 ~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g-~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~-~~~~p~~ 229 (249)
T PF07993_consen 152 PEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHG-LPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIA-LGAFPDL 229 (249)
T ss_dssp HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH----EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHH-H-EEES-
T ss_pred ccccccchhhccCCccHHHHHHHHHHHHHHHHhcCC-ceEEEEecCcccccCCCceeeccchHHHHHHHHHH-cCCcccc
Confidence 0111111111112248888888882 2 2 5 999999999999943221111111 1111111111 1222223
Q ss_pred CCchhhhhhhcccCccHHHHHHHH
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQH 258 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~ 258 (303)
++.. ...++++.+|.+|+++
T Consensus 230 ~~~~----~~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 230 PGDP----DARLDLVPVDYVARAI 249 (249)
T ss_dssp SB-------TT--EEEHHHHHHHH
T ss_pred cCCC----CceEeEECHHHHHhhC
Confidence 3322 3457889998888764
No 69
>PRK09135 pteridine reductase; Provisional
Probab=99.80 E-value=9.2e-18 Score=140.99 Aligned_cols=214 Identities=18% Similarity=0.174 Sum_probs=135.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc------c---cCCCeEEEEecCCCHHHHHHHHhc-----
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA------I---QSSSYCFISCDLLNPLDIKRKLTL----- 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~------~---~~~~~~~~~~D~~~~~~l~~~~~~----- 92 (303)
+.++||||||+|+||++++++|+ +.|++|++++|+..+.. . ....+.++.+|++|.+++..+++.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~-~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLH-AAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF 83 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45799999999999999999999 68999999998753311 0 113577889999999998888875
Q ss_pred --cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc-CCccEEEEeecccccccccCCCcccccCCcC
Q 042242 93 --LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA-KALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 93 --~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
+|.|+|+++.... .....+..+.+++|+.++.++++++.... ..-..++..++ ..
T Consensus 84 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~------------------~~ 145 (249)
T PRK09135 84 GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITD------------------IH 145 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeC------------------hh
Confidence 4669999765322 22334455688999999999999997541 11112222111 11
Q ss_pred cCCCCCCCCccchHHHHHHHHH-----Hh----cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE-----KL----AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGG 236 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e-----~~----~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 236 (303)
+..+..|..+ |+.+|...+ +. .+ ++++++||+.++|+......+ ...... ... ..++
T Consensus 146 ~~~~~~~~~~---Y~~sK~~~~~~~~~l~~~~~~~-i~~~~v~pg~~~~~~~~~~~~---~~~~~~-~~~--~~~~---- 211 (249)
T PRK09135 146 AERPLKGYPV---YCAAKAALEMLTRSLALELAPE-VRVNAVAPGAILWPEDGNSFD---EEARQA-ILA--RTPL---- 211 (249)
T ss_pred hcCCCCCchh---HHHHHHHHHHHHHHHHHHHCCC-CeEEEEEeccccCccccccCC---HHHHHH-HHh--cCCc----
Confidence 2222222334 777776554 11 23 899999999999965332211 111101 111 1111
Q ss_pred chhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 237 TREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
....+++|+|+++.+++..... ..|++||++++...+
T Consensus 212 ---------~~~~~~~d~a~~~~~~~~~~~~--~~g~~~~i~~g~~~~ 248 (249)
T PRK09135 212 ---------KRIGTPEDIAEAVRFLLADASF--ITGQILAVDGGRSLT 248 (249)
T ss_pred ---------CCCcCHHHHHHHHHHHcCcccc--ccCcEEEECCCeecc
Confidence 1123578999998777654322 346899999987654
No 70
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=99.80 E-value=2.2e-19 Score=149.52 Aligned_cols=224 Identities=19% Similarity=0.263 Sum_probs=140.1
Q ss_pred EEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---ccCCCeEEEEecCCCHHHHHHHHhccCceeEEeecccccC
Q 042242 31 AVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWASQ 107 (303)
Q Consensus 31 vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~~~ 107 (303)
|+|+||||.+|+++++.|+ +.+++|++++|++.+.. +...+++++.+|+.|.+++.++|+++|.|+.+..... .
T Consensus 1 I~V~GatG~~G~~v~~~L~-~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~--~ 77 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALL-SAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSH--P 77 (233)
T ss_dssp EEEETTTSHHHHHHHHHHH-HTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSC--C
T ss_pred CEEECCccHHHHHHHHHHH-hCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcch--h
Confidence 7999999999999999999 58999999999985432 3446889999999999999999999998776643221 1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCc--cchHHHHHHH
Q 042242 108 FASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSN--NFYYVLEDLL 185 (303)
Q Consensus 108 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~--~~~y~~~k~~ 185 (303)
. ......++++++++++ ++|++..+-... ..+.....|..+ ..++..++++
T Consensus 78 ~----------~~~~~~~li~Aa~~ag--Vk~~v~ss~~~~---------------~~~~~~~~p~~~~~~~k~~ie~~l 130 (233)
T PF05368_consen 78 S----------ELEQQKNLIDAAKAAG--VKHFVPSSFGAD---------------YDESSGSEPEIPHFDQKAEIEEYL 130 (233)
T ss_dssp C----------HHHHHHHHHHHHHHHT---SEEEESEESSG---------------TTTTTTSTTHHHHHHHHHHHHHHH
T ss_pred h----------hhhhhhhHHHhhhccc--cceEEEEEeccc---------------ccccccccccchhhhhhhhhhhhh
Confidence 1 1234567999999874 677765331111 111111111111 1112234444
Q ss_pred HHHhcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCc
Q 042242 186 KEKLAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATND 265 (303)
Q Consensus 186 ~e~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~ 265 (303)
.+. + ++|+++||+..+....... ... ..+.. ....+.+.+..+ .....+++.+|++++.+.++.++
T Consensus 131 ~~~--~-i~~t~i~~g~f~e~~~~~~----~~~---~~~~~-~~~~~~~~~~~~---~~~~~~~~~~Dvg~~va~il~~p 196 (233)
T PF05368_consen 131 RES--G-IPYTIIRPGFFMENLLPPF----APV---VDIKK-SKDVVTLPGPGN---QKAVPVTDTRDVGRAVAAILLDP 196 (233)
T ss_dssp HHC--T-SEBEEEEE-EEHHHHHTTT----HHT---TCSCC-TSSEEEEETTST---SEEEEEEHHHHHHHHHHHHHHSG
T ss_pred hhc--c-ccceeccccchhhhhhhhh----ccc---ccccc-cceEEEEccCCC---ccccccccHHHHHHHHHHHHcCh
Confidence 333 4 9999999998876311100 010 00000 011233433332 11122269999999999999887
Q ss_pred CCcCCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 266 DISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 266 ~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
...+ .+..+.+++ +.+|+.|+++.+++.+|++.
T Consensus 197 ~~~~-~~~~~~~~~-~~~t~~eia~~~s~~~G~~v 229 (233)
T PF05368_consen 197 EKHN-NGKTIFLAG-ETLTYNEIAAILSKVLGKKV 229 (233)
T ss_dssp GGTT-EEEEEEEGG-GEEEHHHHHHHHHHHHTSEE
T ss_pred HHhc-CCEEEEeCC-CCCCHHHHHHHHHHHHCCcc
Confidence 6541 346777766 78999999999999999975
No 71
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.79 E-value=1e-17 Score=141.01 Aligned_cols=224 Identities=13% Similarity=0.120 Sum_probs=140.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---ccCCCeEEEEecCCC-HHHHHHHH-hccCceeEEeec
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---IQSSSYCFISCDLLN-PLDIKRKL-TLLEDVTHIFWV 102 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~D~~~-~~~l~~~~-~~~~~V~~~~~~ 102 (303)
+++|+||||||+||+.++++|+ ..||+|+++.|++.+.. ....+++++.+|+.| .+.+.+.+ .++|.|+++++.
T Consensus 17 ~~~ilItGasG~iG~~l~~~L~-~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~ 95 (251)
T PLN00141 17 TKTVFVAGATGRTGKRIVEQLL-AKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGF 95 (251)
T ss_pred CCeEEEECCCcHHHHHHHHHHH-hCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCC
Confidence 4799999999999999999999 67999999999876532 112468899999998 46777777 577877776543
Q ss_pred ccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHH
Q 042242 103 TWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLE 182 (303)
Q Consensus 103 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~ 182 (303)
... .. ....++.|..++.++++++++. +..+++++|+..+|+... ..+..+.. .+..+...+...
T Consensus 96 ~~~-~~---~~~~~~~n~~~~~~ll~a~~~~--~~~~iV~iSS~~v~g~~~-------~~~~~~~~--~~~~~~~~~~~~ 160 (251)
T PLN00141 96 RRS-FD---PFAPWKVDNFGTVNLVEACRKA--GVTRFILVSSILVNGAAM-------GQILNPAY--IFLNLFGLTLVA 160 (251)
T ss_pred CcC-CC---CCCceeeehHHHHHHHHHHHHc--CCCEEEEEccccccCCCc-------ccccCcch--hHHHHHHHHHHH
Confidence 211 11 1123577888999999999865 344666666555564221 11111100 001110112233
Q ss_pred HHHHHH-hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHH
Q 042242 183 DLLKEK-LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIW 260 (303)
Q Consensus 183 k~~~e~-~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~ 260 (303)
|...|. .... ++++++||+.+++.... +.....++. ..+...++.+|+|+.+++
T Consensus 161 k~~~e~~l~~~gi~~~iirpg~~~~~~~~-------------------~~~~~~~~~-----~~~~~~i~~~dvA~~~~~ 216 (251)
T PLN00141 161 KLQAEKYIRKSGINYTIVRPGGLTNDPPT-------------------GNIVMEPED-----TLYEGSISRDQVAEVAVE 216 (251)
T ss_pred HHHHHHHHHhcCCcEEEEECCCccCCCCC-------------------ceEEECCCC-----ccccCcccHHHHHHHHHH
Confidence 444441 1222 99999999999974211 001111110 111235788999999999
Q ss_pred HhcCcCCcCCCCceEEeec---CCCccHHhhHHHHHH
Q 042242 261 VATNDDISSTKGQAFNAIN---GPRFTWKEIWPSIGK 294 (303)
Q Consensus 261 ~~~~~~~~~~~g~~yni~~---~~~~s~~e~~~~i~~ 294 (303)
++..+...+ .++.+.+ +...++.+++..+++
T Consensus 217 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 217 ALLCPESSY---KVVEIVARADAPKRSYKDLFASIKQ 250 (251)
T ss_pred HhcChhhcC---cEEEEecCCCCCchhHHHHHHHhhc
Confidence 998876543 6788875 334789999888764
No 72
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.79 E-value=3.5e-17 Score=168.09 Aligned_cols=259 Identities=17% Similarity=0.108 Sum_probs=158.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcC---CCeEEEEecCCcccc----c-------------cCCCeEEEEecCCC-----
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTA---NWKVYGIARKPEITA----I-------------QSSSYCFISCDLLN----- 82 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~---g~~V~~~~r~~~~~~----~-------------~~~~~~~~~~D~~~----- 82 (303)
.++|+|||||||||++++++|++.. .++|+++.|...... . ...+++++.+|+.+
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 5799999999999999999999432 378999999754321 0 01368899999974
Q ss_pred -HHHHHHHHhccCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCC--c--
Q 042242 83 -PLDIKRKLTLLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLP--E-- 157 (303)
Q Consensus 83 -~~~l~~~~~~~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~--g-- 157 (303)
.+.+.++...+|.|+|+++........ . .....|+.++.+++++|... +..+++++|+..+|+...... +
T Consensus 1051 ~~~~~~~l~~~~d~iiH~Aa~~~~~~~~-~--~~~~~nv~gt~~ll~~a~~~--~~~~~v~vSS~~v~~~~~~~~~~~~~ 1125 (1389)
T TIGR03443 1051 SDEKWSDLTNEVDVIIHNGALVHWVYPY-S--KLRDANVIGTINVLNLCAEG--KAKQFSFVSSTSALDTEYYVNLSDEL 1125 (1389)
T ss_pred CHHHHHHHHhcCCEEEECCcEecCccCH-H--HHHHhHHHHHHHHHHHHHhC--CCceEEEEeCeeecCcccccchhhhh
Confidence 355667777888899997764332222 2 24568999999999999865 234555555555664211000 0
Q ss_pred -ccccCCcCcCCCCCC--CCccchHHHHHHHHHHh----cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCC
Q 042242 158 -EKQVRFYDEECPRVS--KSNNFYYVLEDLLKEKL----AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLN 229 (303)
Q Consensus 158 -~~~~~~~~e~~~~~p--~~~~~~y~~~k~~~e~~----~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~ 229 (303)
.....++.|+.+..+ ..+...|+.+|++.|.. ... ++++++||+.|||+......+....+.....-+...+
T Consensus 1126 ~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~ 1205 (1389)
T TIGR03443 1126 VQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLG 1205 (1389)
T ss_pred hhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhC
Confidence 000112233322211 11122388888877721 112 9999999999999743221111111111111111112
Q ss_pred CceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 230 LPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 230 ~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
.. ..+ ....++++++++|++++.++..+... ..+.+||++++..+++.++++.+.+. |.+.+
T Consensus 1206 ~~--p~~------~~~~~~~~Vddva~ai~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~~~ 1267 (1389)
T TIGR03443 1206 LI--PNI------NNTVNMVPVDHVARVVVAAALNPPKE-SELAVAHVTGHPRIRFNDFLGTLKTY-GYDVE 1267 (1389)
T ss_pred Cc--CCC------CCccccccHHHHHHHHHHHHhCCccc-CCCCEEEeCCCCCCcHHHHHHHHHHh-CCCCC
Confidence 11 011 23356888999999999988765321 12368999999999999999999754 55543
No 73
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.78 E-value=4.3e-17 Score=138.58 Aligned_cols=170 Identities=20% Similarity=0.147 Sum_probs=112.4
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----------------ccCCCeEEEEecCCCH------HH
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----------------IQSSSYCFISCDLLNP------LD 85 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----------------~~~~~~~~~~~D~~~~------~~ 85 (303)
++||+||||||+|.+|+..|+.....+|+++.|..+... .-..+++++.+|+..+ ..
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 479999999999999999999555568999999876321 1235899999999854 45
Q ss_pred HHHHHhccCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhc-cCCccEEEEeecccccccccCCCcccccCCc
Q 042242 86 IKRKLTLLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPR-AKALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 86 l~~~~~~~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
++.....+|.|+|.++....-.... . ....|+.|+..+++.|... .+.+.++|+++ ++.......+ ....
T Consensus 81 ~~~La~~vD~I~H~gA~Vn~v~pYs-~--L~~~NVlGT~evlrLa~~gk~Kp~~yVSsis---v~~~~~~~~~---~~~~ 151 (382)
T COG3320 81 WQELAENVDLIIHNAALVNHVFPYS-E--LRGANVLGTAEVLRLAATGKPKPLHYVSSIS---VGETEYYSNF---TVDF 151 (382)
T ss_pred HHHHhhhcceEEecchhhcccCcHH-H--hcCcchHhHHHHHHHHhcCCCceeEEEeeee---eccccccCCC---cccc
Confidence 6667777888999976654333332 2 6899999999999999876 44455555555 2211100000 1111
Q ss_pred CcCCCCC-C-CCccchHHHHHHHHHHh------cCCcceEEecCCceeecCC
Q 042242 165 DEECPRV-S-KSNNFYYVLEDLLKEKL------AGKVAWSVHRPGLLLGSSH 208 (303)
Q Consensus 165 ~e~~~~~-p-~~~~~~y~~~k~~~e~~------~~~~~~~ilRp~~v~G~~~ 208 (303)
++.++.. + ..+...|+++|+..|.. .+ ++++|+||+.|.|+..
T Consensus 152 ~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rG-Lpv~I~Rpg~I~gds~ 202 (382)
T COG3320 152 DEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDRG-LPVTIFRPGYITGDSR 202 (382)
T ss_pred ccccccccccCccCCCcchhHHHHHHHHHHHhhcC-CCeEEEecCeeeccCc
Confidence 1222211 1 11122377777777732 23 9999999999999754
No 74
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.78 E-value=1.8e-17 Score=141.40 Aligned_cols=234 Identities=12% Similarity=0.014 Sum_probs=145.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHhc-------cCc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLTL-------LED 95 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~~-------~~~ 95 (303)
|+|+|+||||+|+||++++++|+ +.|++|++++|++.+.. .....+.++++|++|.+++.+.++. +|.
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAAL-ERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDI 80 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 56899999999999999999999 67999999999875432 1134577889999999988777664 356
Q ss_pred eeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCC
Q 042242 96 VTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECP 169 (303)
Q Consensus 96 V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~ 169 (303)
|+|+++.... .....+..+.+++|+.++..+++.+... .....+++.+++...+.+. +
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~----------~------ 144 (275)
T PRK08263 81 VVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAF----------P------ 144 (275)
T ss_pred EEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCC----------C------
Confidence 8888765432 1233455568999999998888876432 1122345554443222111 0
Q ss_pred CCCCCccchHHHHHHHHH-----H----h-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchh
Q 042242 170 RVSKSNNFYYVLEDLLKE-----K----L-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTRE 239 (303)
Q Consensus 170 ~~p~~~~~~y~~~k~~~e-----~----~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 239 (303)
...+ |+.+|...+ + . .+ ++++++||+.+..+..............+..+... ....
T Consensus 145 --~~~~---Y~~sKaa~~~~~~~la~e~~~~g-i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~-----~~~~--- 210 (275)
T PRK08263 145 --MSGI---YHASKWALEGMSEALAQEVAEFG-IKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREE-----LAEQ--- 210 (275)
T ss_pred --CccH---HHHHHHHHHHHHHHHHHHhhhhC-cEEEEEecCCccCCccccccccCCCchhhhhHHHH-----HHHH---
Confidence 0123 677666543 1 1 23 99999999988774322110000000000000000 0000
Q ss_pred hhhhhcccC-ccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhc
Q 042242 240 IWEEYCLDG-SDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFG 297 (303)
Q Consensus 240 ~~~~~~~~~-~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g 297 (303)
.....+ .+++|+|++++.++..+...+ ..|+..++..+++.++.+.+.++-+
T Consensus 211 ---~~~~~~~~~p~dva~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (275)
T PRK08263 211 ---WSERSVDGDPEAAAEALLKLVDAENPPL---RLFLGSGVLDLAKADYERRLATWEE 263 (275)
T ss_pred ---HHhccCCCCHHHHHHHHHHHHcCCCCCe---EEEeCchHHHHHHHHHHHHHHHHHH
Confidence 111224 788999999999988775443 5555556678999999999988644
No 75
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.77 E-value=3.8e-17 Score=148.23 Aligned_cols=224 Identities=17% Similarity=0.141 Sum_probs=138.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc----------------cCCCeEEEEecCCCHHHHHHHH
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI----------------QSSSYCFISCDLLNPLDIKRKL 90 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~----------------~~~~~~~~~~D~~~~~~l~~~~ 90 (303)
++++||||||+|+||++++++|+ +.|++|++++|+..+... ...+++++.+|+.|.+++.+.+
T Consensus 79 ~gKvVLVTGATGgIG~aLAr~LL-k~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL 157 (576)
T PLN03209 79 DEDLAFVAGATGKVGSRTVRELL-KLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL 157 (576)
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence 56899999999999999999999 689999999998765320 0125788999999999999999
Q ss_pred hccCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCC
Q 042242 91 TLLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPR 170 (303)
Q Consensus 91 ~~~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~ 170 (303)
.++|.|||+++..... ..+....+++|+.++.+++++++..+ ..+++++++...+. .+ .... ..
T Consensus 158 ggiDiVVn~AG~~~~~--v~d~~~~~~VN~~Gt~nLl~Aa~~ag--VgRIV~VSSiga~~-----~g------~p~~-~~ 221 (576)
T PLN03209 158 GNASVVICCIGASEKE--VFDVTGPYRIDYLATKNLVDAATVAK--VNHFILVTSLGTNK-----VG------FPAA-IL 221 (576)
T ss_pred cCCCEEEEcccccccc--ccchhhHHHHHHHHHHHHHHHHHHhC--CCEEEEEccchhcc-----cC------cccc-ch
Confidence 9999888887653221 11223368899999999999998763 34555555421210 00 0000 00
Q ss_pred CCCCccchHHHHHHHHH-Hh--cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhccc
Q 042242 171 VSKSNNFYYVLEDLLKE-KL--AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLD 247 (303)
Q Consensus 171 ~p~~~~~~y~~~k~~~e-~~--~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 247 (303)
. ..+.|...+...+ .. .+ ++|+++||+.++++....... . .......+ ..+..
T Consensus 222 --~-sk~~~~~~KraaE~~L~~sG-IrvTIVRPG~L~tp~d~~~~t---~-----------~v~~~~~d------~~~gr 277 (576)
T PLN03209 222 --N-LFWGVLCWKRKAEEALIASG-LPYTIVRPGGMERPTDAYKET---H-----------NLTLSEED------TLFGG 277 (576)
T ss_pred --h-hHHHHHHHHHHHHHHHHHcC-CCEEEEECCeecCCccccccc---c-----------ceeecccc------ccCCC
Confidence 0 1111322232222 22 24 999999999998753221100 0 00000000 01112
Q ss_pred CccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHH
Q 042242 248 GSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIG 293 (303)
Q Consensus 248 ~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~ 293 (303)
.+..+|||..+++++.++... .+.+|.+.++.......+.+.+.
T Consensus 278 ~isreDVA~vVvfLasd~~as--~~kvvevi~~~~~p~~~~~~~~~ 321 (576)
T PLN03209 278 QVSNLQVAELMACMAKNRRLS--YCKVVEVIAETTAPLTPMEELLA 321 (576)
T ss_pred ccCHHHHHHHHHHHHcCchhc--cceEEEEEeCCCCCCCCHHHHHH
Confidence 456788999999988866532 13789998876433344444443
No 76
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.77 E-value=8.9e-17 Score=134.81 Aligned_cols=214 Identities=13% Similarity=0.086 Sum_probs=135.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------ccCCCeEEEEecCCCHHHHHHHHhc-----
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------IQSSSYCFISCDLLNPLDIKRKLTL----- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~D~~~~~~l~~~~~~----- 92 (303)
+++++||||||||+||++|+++|+ +.|++|+++.|+..... ....+++++.+|+.|.+++.+++++
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLA-RAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERF 82 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-HCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHc
Confidence 456799999999999999999999 68999988887755321 1234688899999999998887764
Q ss_pred --cCceeEEeecccccC----ChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCc
Q 042242 93 --LEDVTHIFWVTWASQ----FASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 93 --~~~V~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
.|.|+|+++...... ......+.++.|+.++.++++.+.+. .....++++.|+...+.+.
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~------------ 150 (249)
T PRK12825 83 GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGW------------ 150 (249)
T ss_pred CCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCC------------
Confidence 366889876533222 34444567899999999999988543 1123455555443222110
Q ss_pred CcCCCCCCCCccchHHHHHHHHH-----H---h--cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE-----K---L--AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e-----~---~--~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
.+... |..+|...+ + . .+ ++++++||+.++|+...... .... .. ..+
T Consensus 151 ------~~~~~---y~~sK~~~~~~~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~---~~~~----~~---~~~--- 207 (249)
T PRK12825 151 ------PGRSN---YAAAKAGLVGLTKALARELAEYG-ITVNMVAPGDIDTDMKEATI---EEAR----EA---KDA--- 207 (249)
T ss_pred ------CCchH---HHHHHHHHHHHHHHHHHHHhhcC-eEEEEEEECCccCCcccccc---chhH----Hh---hhc---
Confidence 00112 565554332 1 1 23 99999999999995422110 1100 00 000
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF 283 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~ 283 (303)
. ..+..+++.+|+++++.+++...... ..|+.|+++++..+
T Consensus 208 -~------~~~~~~~~~~dva~~~~~~~~~~~~~-~~g~~~~i~~g~~~ 248 (249)
T PRK12825 208 -E------TPLGRSGTPEDIARAVAFLCSDASDY-ITGQVIEVTGGVDV 248 (249)
T ss_pred -c------CCCCCCcCHHHHHHHHHHHhCccccC-cCCCEEEeCCCEee
Confidence 0 11122678889999999988665322 34689999988653
No 77
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.75 E-value=3.7e-16 Score=133.42 Aligned_cols=233 Identities=14% Similarity=0.099 Sum_probs=146.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----cc----CCCeEEEEecCCCHHHHHHHHh-----
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----IQ----SSSYCFISCDLLNPLDIKRKLT----- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~----~~~~~~~~~D~~~~~~l~~~~~----- 91 (303)
+.+|+++||||+|+||++++++|+ +.|++|++++|++.+.. .. ..++.++.+|+.|.+++.+.++
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLV-AAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW 83 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-HCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 346899999999999999999999 68999999999865421 00 1357788999999998888776
Q ss_pred --ccCceeEEeecc-----cccCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccC
Q 042242 92 --LLEDVTHIFWVT-----WASQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVR 162 (303)
Q Consensus 92 --~~~~V~~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~ 162 (303)
.+|.++|+++.. ....+..+..+.++.|+.++..+++++.+.. ..-.+++.+++...+...
T Consensus 84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------- 153 (276)
T PRK05875 84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH---------- 153 (276)
T ss_pred cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC----------
Confidence 456788887642 1222334445678899999999998876541 112244444432222000
Q ss_pred CcCcCCCCCCCCccchHHHHHHHHH-----Hh---cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCcee
Q 042242 163 FYDEECPRVSKSNNFYYVLEDLLKE-----KL---AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 163 ~~~e~~~~~p~~~~~~y~~~k~~~e-----~~---~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
+ +..+ |+.+|...+ +. ... ++++++||+.+.++........ ... ...... ..+
T Consensus 154 ------~--~~~~---Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~-~~~--~~~~~~--~~~-- 215 (276)
T PRK05875 154 ------R--WFGA---YGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITES-PEL--SADYRA--CTP-- 215 (276)
T ss_pred ------C--CCcc---hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccC-HHH--HHHHHc--CCC--
Confidence 0 1233 677665554 11 122 8999999998876422111000 000 000000 111
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc----cHHhhHHHHHHHhccc
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF----TWKEIWPSIGKKFGVK 299 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~----s~~e~~~~i~~~~g~~ 299 (303)
+..+.+++|+|.++++++..+... ..|++|+++++..+ +..|+++.+....|+.
T Consensus 216 -----------~~~~~~~~dva~~~~~l~~~~~~~-~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 273 (276)
T PRK05875 216 -----------LPRVGEVEDVANLAMFLLSDAASW-ITGQVINVDGGHMLRRGPDFSSMLEPVFGADGLR 273 (276)
T ss_pred -----------CCCCcCHHHHHHHHHHHcCchhcC-cCCCEEEECCCeeccCCccHHHHHHHHhhHHHHh
Confidence 122567899999999998765432 23589999988765 7788888777665543
No 78
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.74 E-value=2.2e-16 Score=132.71 Aligned_cols=214 Identities=14% Similarity=0.082 Sum_probs=134.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|++.+.. ....++.++.+|+.|.+++.+.+++
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~-~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLA-ADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFG 82 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 457899999999999999999999 68999999999854321 1123588899999999998888864
Q ss_pred -cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 93 -LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 93 -~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
+|.|+|+++.... ..+..+..+.++.|+.++.++++++... ..+..+++.+++...+.. +.
T Consensus 83 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~-----------~~- 150 (251)
T PRK12826 83 RLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRV-----------GY- 150 (251)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhcc-----------CC-
Confidence 4668888654322 2233444568899999999999988643 122334454444322200 00
Q ss_pred cCCCCCCCCccchHHHHHHHHH-----H---h--cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE-----K---L--AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e-----~---~--~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
.+..+ |+.+|...+ + . .+ ++++++||+.++|+....... ..+ ...+.. ..|
T Consensus 151 -----~~~~~---y~~sK~a~~~~~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~--~~~--~~~~~~--~~~---- 211 (251)
T PRK12826 151 -----PGLAH---YAASKAGLVGFTRALALELAARN-ITVNSVHPGGVDTPMAGNLGD--AQW--AEAIAA--AIP---- 211 (251)
T ss_pred -----CCccH---HHHHHHHHHHHHHHHHHHHHHcC-eEEEEEeeCCCCcchhhhcCc--hHH--HHHHHh--cCC----
Confidence 00122 666554322 1 1 23 899999999999964322111 000 000100 111
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+..+++++|+|.++..++..+... ..|++|++.++.
T Consensus 212 ---------~~~~~~~~dva~~~~~l~~~~~~~-~~g~~~~~~~g~ 247 (251)
T PRK12826 212 ---------LGRLGEPEDIAAAVLFLASDEARY-ITGQTLPVDGGA 247 (251)
T ss_pred ---------CCCCcCHHHHHHHHHHHhCccccC-cCCcEEEECCCc
Confidence 113678899999998877554321 346899998765
No 79
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.72 E-value=5.2e-16 Score=131.08 Aligned_cols=226 Identities=15% Similarity=0.145 Sum_probs=142.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----ccCCCeEEEEecCCCHHHHHHHHhc-------cC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----IQSSSYCFISCDLLNPLDIKRKLTL-------LE 94 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~D~~~~~~l~~~~~~-------~~ 94 (303)
|+++++||||+|+||+.++++|+ +.|++|++++|++.+.. ....+++++.+|+.|.+++...++. +|
T Consensus 1 ~~k~ilItGat~~iG~~la~~L~-~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 1 TKRTALVTGAAGGIGQALARRFL-AAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVD 79 (257)
T ss_pred CCCEEEEECCcchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999999999999 68999999999865432 1123578899999999998877765 56
Q ss_pred ceeEEeeccccc----CChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCC
Q 042242 95 DVTHIFWVTWAS----QFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC 168 (303)
Q Consensus 95 ~V~~~~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~ 168 (303)
.|+|+++..... .........++.|+.++..+++++... .....++++.++...+ . .+|
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~--~--~~~----------- 144 (257)
T PRK07074 80 VLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGM--A--ALG----------- 144 (257)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhc--C--CCC-----------
Confidence 788887643211 122333345789999999998888543 1122344444432111 0 000
Q ss_pred CCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCch
Q 042242 169 PRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTR 238 (303)
Q Consensus 169 ~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 238 (303)
... |+.+|...+ +. .+ +++.++||+.++++...........+ ....
T Consensus 145 ----~~~---y~~sK~a~~~~~~~~a~~~~~~g-i~v~~v~pg~v~t~~~~~~~~~~~~~--~~~~-------------- 200 (257)
T PRK07074 145 ----HPA---YSAAKAGLIHYTKLLAVEYGRFG-IRANAVAPGTVKTQAWEARVAANPQV--FEEL-------------- 200 (257)
T ss_pred ----Ccc---cHHHHHHHHHHHHHHHHHHhHhC-eEEEEEEeCcCCcchhhcccccChHH--HHHH--------------
Confidence 012 454444332 11 23 89999999999874321110000000 0000
Q ss_pred hhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHH
Q 042242 239 EIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGK 294 (303)
Q Consensus 239 ~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~ 294 (303)
..+ ..+.++++++|+++++++++...... ..|..+++.++...+..|+.+.+.+
T Consensus 201 ~~~-~~~~~~~~~~d~a~~~~~l~~~~~~~-~~g~~~~~~~g~~~~~~~~~~~~~~ 254 (257)
T PRK07074 201 KKW-YPLQDFATPDDVANAVLFLASPAARA-ITGVCLPVDGGLTAGNREMARTLTL 254 (257)
T ss_pred Hhc-CCCCCCCCHHHHHHHHHHHcCchhcC-cCCcEEEeCCCcCcCChhhhhhhcc
Confidence 001 22345788999999999988543221 3458899999999999999998764
No 80
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.72 E-value=2.1e-16 Score=132.82 Aligned_cols=217 Identities=18% Similarity=0.066 Sum_probs=133.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc------c--cCCCeEEEEecCCCHHHHHHHHhc-----
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA------I--QSSSYCFISCDLLNPLDIKRKLTL----- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~------~--~~~~~~~~~~D~~~~~~l~~~~~~----- 92 (303)
+++++++||||+|+||++++++|+ ..|++|++++|+..... . ...++.++.+|++|.+++.++++.
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~-~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILA-GAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEF 82 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHH-HCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 346899999999999999999999 68999999999754211 1 123577889999999998877763
Q ss_pred --cCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCC
Q 042242 93 --LEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPR 170 (303)
Q Consensus 93 --~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~ 170 (303)
+|.|+|.++..... ...+.+.+++|+.++.++++++.+...+-.+++++|+...+ ..+..+..+.
T Consensus 83 ~~~d~vi~~ag~~~~~--~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~-----------~~~~~~~~~~ 149 (248)
T PRK07806 83 GGLDALVLNASGGMES--GMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAH-----------FIPTVKTMPE 149 (248)
T ss_pred CCCcEEEECCCCCCCC--CCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhh-----------cCccccCCcc
Confidence 45578876543211 11223468899999999999998752221244444432111 0000011111
Q ss_pred CCCCccchHHHHHHHHHH-----h---cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCch-hh
Q 042242 171 VSKSNNFYYVLEDLLKEK-----L---AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTR-EI 240 (303)
Q Consensus 171 ~p~~~~~~y~~~k~~~e~-----~---~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~ 240 (303)
..+ |+.+|...+. . ... +++++++|+.+-++... .+. .+ ..+ +.. ..
T Consensus 150 --~~~---Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~-------~~~-----~~--~~~----~~~~~~ 206 (248)
T PRK07806 150 --YEP---VARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTA-------TLL-----NR--LNP----GAIEAR 206 (248)
T ss_pred --ccH---HHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhh-------hhh-----cc--CCH----HHHHHH
Confidence 123 7777766551 1 122 88888888776653110 000 00 000 000 01
Q ss_pred hhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc
Q 042242 241 WEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF 283 (303)
Q Consensus 241 ~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~ 283 (303)
+ .....+.+++|+|++++.++..+... |++|++++++..
T Consensus 207 ~-~~~~~~~~~~dva~~~~~l~~~~~~~---g~~~~i~~~~~~ 245 (248)
T PRK07806 207 R-EAAGKLYTVSEFAAEVARAVTAPVPS---GHIEYVGGADYF 245 (248)
T ss_pred H-hhhcccCCHHHHHHHHHHHhhccccC---ccEEEecCccce
Confidence 1 23345889999999999999866444 489999998753
No 81
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.72 E-value=2e-16 Score=133.99 Aligned_cols=222 Identities=17% Similarity=0.030 Sum_probs=130.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
++++++|||||+|+||+++++.|+ +.|++|++++|++.... . ....+.++++|++|.+++.++++.
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 83 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELA-RAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFG 83 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHH-HCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 346899999999999999999999 68999999999875421 1 123467889999999988887764
Q ss_pred -cCceeEEeeccccc----CChHHHHHHHHHHHHH----HHHHHHHH-hhccCCccEEEEeecccccccccCCCcccccC
Q 042242 93 -LEDVTHIFWVTWAS----QFASDMHKCCEQNKAM----MCNALNAI-LPRAKALKHVSLQTGMKHYVSLQGLPEEKQVR 162 (303)
Q Consensus 93 -~~~V~~~~~~~~~~----~~~~~~~~~~~~n~~~----~~~ll~~~-~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~ 162 (303)
+|.|+|+++..... .......+.+++|+.+ +..+++.+ +.. ...+++.+|+...+.. .
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~--~~~~iv~~ss~~~~~~----------~ 151 (262)
T PRK13394 84 SVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD--RGGVVIYMGSVHSHEA----------S 151 (262)
T ss_pred CCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc--CCcEEEEEcchhhcCC----------C
Confidence 56689997653221 1233444578899999 55556655 332 2234444443211100 0
Q ss_pred CcCcCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccch-hhHHH-HHHHHhhhCCCc
Q 042242 163 FYDEECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNF-LGCLC-VYGAVCKHLNLP 231 (303)
Q Consensus 163 ~~~e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~-~~~~~-~~~~~~~~~~~~ 231 (303)
+ +... |+.+|...+ ..... ++++++||+.++++.....+.. ..... ......+ .
T Consensus 152 ~--------~~~~---y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~----~ 216 (262)
T PRK13394 152 P--------LKSA---YVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVK----K 216 (262)
T ss_pred C--------CCcc---cHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHH----H
Confidence 0 0112 444433222 11122 9999999999998532211100 00000 0000000 0
Q ss_pred eeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 232 FVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 232 ~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
+...+ .....+++++|++.++++++..+... ..|+.|++.++..
T Consensus 217 ~~~~~------~~~~~~~~~~dva~a~~~l~~~~~~~-~~g~~~~~~~g~~ 260 (262)
T PRK13394 217 VMLGK------TVDGVFTTVEDVAQTVLFLSSFPSAA-LTGQSFVVSHGWF 260 (262)
T ss_pred HHhcC------CCCCCCCCHHHHHHHHHHHcCccccC-CcCCEEeeCCcee
Confidence 00011 23345889999999999888654322 3458898887743
No 82
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.70 E-value=6.1e-16 Score=130.70 Aligned_cols=226 Identities=12% Similarity=0.017 Sum_probs=136.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHhc-------cCc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLTL-------LED 95 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~~-------~~~ 95 (303)
++++++||||+|+||++++++|+ +.|++|++++|+..... .....+.++.+|++|.+++.++++. +|.
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYL-AEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI 83 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-HcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 46899999999999999999999 68999999999876432 1123578889999999988887764 456
Q ss_pred eeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhcc-C--CccEEEEeecccccccccCCCcccccCCcCcCC
Q 042242 96 VTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPRA-K--ALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC 168 (303)
Q Consensus 96 V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~--~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~ 168 (303)
++|+++... ......+..+.++.|+.++..+++++.... . .-.+++.+++.... + +.
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~------~------~~---- 147 (257)
T PRK07067 84 LFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGR------R------GE---- 147 (257)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhC------C------CC----
Confidence 888865432 122334455689999999999999987541 1 11244444432111 0 00
Q ss_pred CCCCCCccchHHHHHHHHH-----Hh---cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchh
Q 042242 169 PRVSKSNNFYYVLEDLLKE-----KL---AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTRE 239 (303)
Q Consensus 169 ~~~p~~~~~~y~~~k~~~e-----~~---~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 239 (303)
+ +... |+.+|...+ .. ... +++++++|+.++++....... ....+..... +......+.
T Consensus 148 ~--~~~~---Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~---~~~~~~~~~~--~~~~~~~~~-- 215 (257)
T PRK07067 148 A--LVSH---YCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDA---LFARYENRPP--GEKKRLVGE-- 215 (257)
T ss_pred C--CCch---hhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhh---hhhhccCCCH--HHHHHHHhh--
Confidence 0 1222 666554332 11 122 999999999999853111000 0000000000 000000000
Q ss_pred hhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 240 IWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 240 ~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
. ..+..+.+++|+|.++++++..+... ..|++|++.+++.+|
T Consensus 216 -~-~~~~~~~~~~dva~~~~~l~s~~~~~-~~g~~~~v~gg~~~~ 257 (257)
T PRK07067 216 -A-VPLGRMGVPDDLTGMALFLASADADY-IVAQTYNVDGGNWMS 257 (257)
T ss_pred -c-CCCCCccCHHHHHHHHHHHhCccccc-ccCcEEeecCCEeCC
Confidence 0 22345778899999999988765332 346899999886543
No 83
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.70 E-value=3.9e-15 Score=125.20 Aligned_cols=213 Identities=14% Similarity=0.124 Sum_probs=134.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHhc-------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLTL------- 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~------- 92 (303)
++|+++||||+|+||++++++|+ ..|++|++++|++.... . ...++..+.+|++|.+++.++++.
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~-~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALA-REGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG 83 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 46899999999999999999999 68999999999865321 0 123567889999999988776653
Q ss_pred cCceeEEeeccc-------ccCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCC
Q 042242 93 LEDVTHIFWVTW-------ASQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRF 163 (303)
Q Consensus 93 ~~~V~~~~~~~~-------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~ 163 (303)
+|.|||+++... ...+.....+.+++|+.++.++++++.... .+..+++..++...|.
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~------------- 150 (250)
T PRK07774 84 IDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL------------- 150 (250)
T ss_pred CCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC-------------
Confidence 567999876421 122334445578999999999999988651 1123455444432221
Q ss_pred cCcCCCCCCCCccchHHHHHHHHH-----Hh---cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee
Q 042242 164 YDEECPRVSKSNNFYYVLEDLLKE-----KL---AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 164 ~~e~~~~~p~~~~~~y~~~k~~~e-----~~---~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
+..+ |+.+|...+ +. ... +++++++|+.+..+...... ... ......+ ..+..
T Consensus 151 --------~~~~---Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~---~~~-~~~~~~~--~~~~~- 212 (250)
T PRK07774 151 --------YSNF---YGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVT---PKE-FVADMVK--GIPLS- 212 (250)
T ss_pred --------Cccc---cHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccC---CHH-HHHHHHh--cCCCC-
Confidence 1223 666555443 11 112 89999999988774322110 111 1111111 11111
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
-..+++|+|.+++.++...... ..|++||+.++..++
T Consensus 213 ------------~~~~~~d~a~~~~~~~~~~~~~-~~g~~~~v~~g~~~~ 249 (250)
T PRK07774 213 ------------RMGTPEDLVGMCLFLLSDEASW-ITGQIFNVDGGQIIR 249 (250)
T ss_pred ------------CCcCHHHHHHHHHHHhChhhhC-cCCCEEEECCCeecc
Confidence 1346788999998887654321 345899999887654
No 84
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.70 E-value=5.9e-16 Score=130.48 Aligned_cols=215 Identities=16% Similarity=0.119 Sum_probs=129.8
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHhc-------cC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLTL-------LE 94 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~~-------~~ 94 (303)
+++|||||+|+||++++++|+ +.|++|++++|++.... ....++.++++|+.|.+++..+++. .|
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~-~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALA-AAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 689999999999999999999 68999999999865431 0123578899999999977665543 46
Q ss_pred ceeEEeeccccc----CChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCC
Q 042242 95 DVTHIFWVTWAS----QFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC 168 (303)
Q Consensus 95 ~V~~~~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~ 168 (303)
.|+|+++..... ....+..+.++.|+.++..+++.+... .....+++++++...+.+. +.
T Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~----------~~---- 146 (255)
T TIGR01963 81 ILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVAS----------PF---- 146 (255)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCC----------CC----
Confidence 688887653321 123334457789999988888877532 1122345454442222110 00
Q ss_pred CCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCce------
Q 042242 169 PRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPF------ 232 (303)
Q Consensus 169 ~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 232 (303)
..+ |..+|...+ .. .+ ++++++||+.++++..... ... .......+.
T Consensus 147 ----~~~---y~~sk~a~~~~~~~~~~~~~~~~-i~v~~i~pg~v~~~~~~~~---~~~------~~~~~~~~~~~~~~~ 209 (255)
T TIGR01963 147 ----KSA---YVAAKHGLIGLTKVLALEVAAHG-ITVNAICPGYVRTPLVEKQ---IAD------QAKTRGIPEEQVIRE 209 (255)
T ss_pred ----Cch---hHHHHHHHHHHHHHHHHHhhhcC-eEEEEEecCccccHHHHHH---HHh------hhcccCCCchHHHHH
Confidence 112 444433221 11 23 9999999999998531110 000 000000000
Q ss_pred -eeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 233 -VFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 233 -~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
..++ .....+++++|+|.++++++..+... ..|+.|++.++..
T Consensus 210 ~~~~~------~~~~~~~~~~d~a~~~~~~~~~~~~~-~~g~~~~~~~g~~ 253 (255)
T TIGR01963 210 VMLPG------QPTKRFVTVDEVAETALFLASDAAAG-ITGQAIVLDGGWT 253 (255)
T ss_pred HHHcc------CccccCcCHHHHHHHHHHHcCccccC-ccceEEEEcCccc
Confidence 0011 23345789999999999988764221 3358899988754
No 85
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.70 E-value=2e-15 Score=126.39 Aligned_cols=213 Identities=15% Similarity=0.151 Sum_probs=132.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHhcc-----
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLTLL----- 93 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~~----- 93 (303)
+++++|+||||+|+||++++++|+ +.|++|++++|++.+.. . ...++.++.+|+.|++++.++++++
T Consensus 3 ~~~~~ilItGasg~iG~~l~~~l~-~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 3 LQGKTALVTGASRGIGRAIALRLA-ADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFG 81 (246)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 345799999999999999999999 68999999999875422 1 1235778889999999888877653
Q ss_pred --CceeEEeeccccc----CChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 94 --EDVTHIFWVTWAS----QFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 94 --~~V~~~~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
|.|+|+++..... .......+.++.|+.+..++++++... .....+++.+++.... ++
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~------~~-------- 147 (246)
T PRK05653 82 ALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGV------TG-------- 147 (246)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhc------cC--------
Confidence 6688886543221 123334457899999999999888653 1223455555542111 00
Q ss_pred cCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGG 236 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 236 (303)
..+..+ |..+|...+ ..... ++++++||+.++++..... .... ...... ..+
T Consensus 148 ----~~~~~~---y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~----~~~~-~~~~~~--~~~----- 208 (246)
T PRK05653 148 ----NPGQTN---YSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGL----PEEV-KAEILK--EIP----- 208 (246)
T ss_pred ----CCCCcH---hHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhh----hHHH-HHHHHh--cCC-----
Confidence 000122 555443222 11122 8999999999998543210 0100 000000 111
Q ss_pred chhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 237 TREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+..+++.+|+++.+.+++..... ...|+.|+++++.
T Consensus 209 --------~~~~~~~~dva~~~~~~~~~~~~-~~~g~~~~~~gg~ 244 (246)
T PRK05653 209 --------LGRLGQPEEVANAVAFLASDAAS-YITGQVIPVNGGM 244 (246)
T ss_pred --------CCCCcCHHHHHHHHHHHcCchhc-CccCCEEEeCCCe
Confidence 12356788999999888754332 1346899998875
No 86
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.70 E-value=2.6e-15 Score=125.20 Aligned_cols=205 Identities=16% Similarity=0.134 Sum_probs=131.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----ccCCCeEEEEecCCCHHHHHHHHhc-------cC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----IQSSSYCFISCDLLNPLDIKRKLTL-------LE 94 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~D~~~~~~l~~~~~~-------~~ 94 (303)
++|+||||||+|+||+.++++|+ +.|++|++++|++.+.. ......+++.+|+.|.+++.++++. +|
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLA-ARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLD 84 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHH-HCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcC
Confidence 46899999999999999999999 67999999999765421 2234577888999999988877764 46
Q ss_pred ceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCC
Q 042242 95 DVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC 168 (303)
Q Consensus 95 ~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~ 168 (303)
.|+|.++.... ........+.++.|+.++.++++++.+. .....+++..++...|...
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------- 148 (239)
T PRK12828 85 ALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAG---------------- 148 (239)
T ss_pred EEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCC----------------
Confidence 68888654221 1223334457889999999999988653 2234456665554333111
Q ss_pred CCCCCCccchHHHHHHHH-----HHh---cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchh
Q 042242 169 PRVSKSNNFYYVLEDLLK-----EKL---AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTRE 239 (303)
Q Consensus 169 ~~~p~~~~~~y~~~k~~~-----e~~---~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 239 (303)
+ +..+ |..+|... ... ... +++.++||+.++++.... ..+ .
T Consensus 149 ~--~~~~---y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~------------------~~~----~--- 198 (239)
T PRK12828 149 P--GMGA---YAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRA------------------DMP----D--- 198 (239)
T ss_pred C--Ccch---hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhh------------------cCC----c---
Confidence 0 0122 55544322 211 112 999999999999841110 001 0
Q ss_pred hhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 240 IWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 240 ~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
..+..+++++|+|.++++++.+.... ..|+.+++.++..
T Consensus 199 ---~~~~~~~~~~dva~~~~~~l~~~~~~-~~g~~~~~~g~~~ 237 (239)
T PRK12828 199 ---ADFSRWVTPEQIAAVIAFLLSDEAQA-ITGASIPVDGGVA 237 (239)
T ss_pred ---hhhhcCCCHHHHHHHHHHHhCccccc-ccceEEEecCCEe
Confidence 11122578899999998888754322 3458888888754
No 87
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=99.70 E-value=1.5e-15 Score=121.00 Aligned_cols=245 Identities=18% Similarity=0.147 Sum_probs=167.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---c----------cCCCeEEEEecCCCHHHHHHHHhccC
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---I----------QSSSYCFISCDLLNPLDIKRKLTLLE 94 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---~----------~~~~~~~~~~D~~~~~~l~~~~~~~~ 94 (303)
.|..||||-||.=|++|++.|+ .+||+|.++.|+.+.-. . ........-+|++|...+.+++.-+.
T Consensus 28 rkvALITGItGQDGSYLaEfLL-~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ik 106 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLL-SKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIK 106 (376)
T ss_pred ceEEEEecccCCCchHHHHHHH-hCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccC
Confidence 3578999999999999999999 79999999999987631 1 11235566799999999999988776
Q ss_pred --ceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeeccccc-ccccCCCcccccCCcCcCCC
Q 042242 95 --DVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHY-VSLQGLPEEKQVRFYDEECP 169 (303)
Q Consensus 95 --~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y-~~~~~~~g~~~~~~~~e~~~ 169 (303)
.|.|+++.++..-+..-++..-++...|+.+++++.+.. ..++ + .| .++++.||...+.|..|.+|
T Consensus 107 PtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~V-r--------fYQAstSElyGkv~e~PQsE~TP 177 (376)
T KOG1372|consen 107 PTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKV-R--------FYQASTSELYGKVQEIPQSETTP 177 (376)
T ss_pred chhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccce-e--------EEecccHhhcccccCCCcccCCC
Confidence 399999888877776666566788889999999999875 1222 2 23 34555677666889999999
Q ss_pred CCCCCccchHHHHHHHHH-----HhcCCcceEEecCCceeec-CCCCccchhh-HHHHHHH-HhhhCCCceeeCCchhhh
Q 042242 170 RVSKSNNFYYVLEDLLKE-----KLAGKVAWSVHRPGLLLGS-SHRSLYNFLG-CLCVYGA-VCKHLNLPFVFGGTREIW 241 (303)
Q Consensus 170 ~~p~~~~~~y~~~k~~~e-----~~~~~~~~~ilRp~~v~G~-~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~g~~~~~ 241 (303)
+.|.+| |+..|+..- +-.. .. ...+-|.+|.. .|+.+.++.. ++..-.+ ++.+.. ....-|+.
T Consensus 178 FyPRSP---Ya~aKmy~~WivvNyREA-Yn-mfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqq-e~~~LGNL--- 248 (376)
T KOG1372|consen 178 FYPRSP---YAAAKMYGYWIVVNYREA-YN-MFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQ-EKIELGNL--- 248 (376)
T ss_pred CCCCCh---hHHhhhhheEEEEEhHHh-hc-ceeeccEeecCCCCccccchhhHHHHHHHHHhhhcce-eeEEecch---
Confidence 999999 998887654 1111 00 11122334432 1222333322 2221111 222222 23445554
Q ss_pred hhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhc
Q 042242 242 EEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFG 297 (303)
Q Consensus 242 ~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g 297 (303)
....++-++.|-++++...++++.. .-|-|+.++..|++|+.+.-...+|
T Consensus 249 -~a~RDWGhA~dYVEAMW~mLQ~d~P-----dDfViATge~hsVrEF~~~aF~~ig 298 (376)
T KOG1372|consen 249 -SALRDWGHAGDYVEAMWLMLQQDSP-----DDFVIATGEQHSVREFCNLAFAEIG 298 (376)
T ss_pred -hhhcccchhHHHHHHHHHHHhcCCC-----CceEEecCCcccHHHHHHHHHHhhC
Confidence 5667778888888877666655543 4599999999999999987776666
No 88
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.69 E-value=3.3e-15 Score=127.82 Aligned_cols=220 Identities=15% Similarity=0.075 Sum_probs=132.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----cc----CCCeEEEEecCCCHHHHHHHHhc-----
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----IQ----SSSYCFISCDLLNPLDIKRKLTL----- 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~----~~~~~~~~~D~~~~~~l~~~~~~----- 92 (303)
+++++|||||+|+||+++++.|+ +.|++|++++|++.... .. ..+++++.+|+.|+++++. ++.
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~ 79 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELA-KKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI 79 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-hCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence 56789999999999999999999 68999999999865421 00 2368889999999988776 543
Q ss_pred --cCceeEEeeccccc----CChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCCc
Q 042242 93 --LEDVTHIFWVTWAS----QFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 93 --~~~V~~~~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
+|.|+|+++..... ....+..+.+++|+.++.++++.+.+.. .+..+++++++...+.+.
T Consensus 80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------ 147 (280)
T PRK06914 80 GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGF------------ 147 (280)
T ss_pred CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCC------------
Confidence 35588886543321 1233444578899999998888865431 122344444432111000
Q ss_pred CcCCCCCCCCccchHHHHHHHHH-----Hh---cCC-cceEEecCCceeecCCCCccch-----h--hHHHHH-HHHhhh
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE-----KL---AGK-VAWSVHRPGLLLGSSHRSLYNF-----L--GCLCVY-GAVCKH 227 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e-----~~---~~~-~~~~ilRp~~v~G~~~~~~~~~-----~--~~~~~~-~~~~~~ 227 (303)
.+..+ |+.+|...+ +. ... ++++++||+.+.++........ . ...... ..+...
T Consensus 148 ------~~~~~---Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (280)
T PRK06914 148 ------PGLSP---YVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKH 218 (280)
T ss_pred ------CCCch---hHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHH
Confidence 01223 555444432 11 122 9999999999988521110000 0 000000 000000
Q ss_pred CCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHH
Q 042242 228 LNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWK 286 (303)
Q Consensus 228 ~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~ 286 (303)
.. .....+.+++|+|.+++.++.++... ..|+++++..+++.
T Consensus 219 -------~~------~~~~~~~~~~dva~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 260 (280)
T PRK06914 219 -------IN------SGSDTFGNPIDVANLIVEIAESKRPK----LRYPIGKGVKLMIL 260 (280)
T ss_pred -------Hh------hhhhccCCHHHHHHHHHHHHcCCCCC----cccccCCchHHHHH
Confidence 00 11123678899999999999877542 46988877766555
No 89
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.69 E-value=7e-16 Score=130.46 Aligned_cols=222 Identities=15% Similarity=0.041 Sum_probs=131.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----cc----CCCeEEEEecCCCHHHHHHHHhc-----
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----IQ----SSSYCFISCDLLNPLDIKRKLTL----- 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~----~~~~~~~~~D~~~~~~l~~~~~~----- 92 (303)
|+|+|+||||+|+||+++++.|+ +.|++|++++|+..... .. ...+.++.+|++|.+++.++++.
T Consensus 1 m~k~ilItG~~~~IG~~la~~l~-~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 79 (259)
T PRK12384 1 MNQVAVVIGGGQTLGAFLCHGLA-EEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIF 79 (259)
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999 68999999999765421 00 13578899999999888776654
Q ss_pred --cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc--CC-ccEEEEeeccc-ccccccCCCcccccC
Q 042242 93 --LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA--KA-LKHVSLQTGMK-HYVSLQGLPEEKQVR 162 (303)
Q Consensus 93 --~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~-~~~~~~~s~~~-~y~~~~~~~g~~~~~ 162 (303)
.|.|+|+++.... .....+....++.|+.++..+++++.+.. .. -.+++.+++.. .++..
T Consensus 80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~---------- 149 (259)
T PRK12384 80 GRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSK---------- 149 (259)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCC----------
Confidence 3568888764332 22333445578999999888888776541 11 12444443311 11000
Q ss_pred CcCcCCCCCCCCccchHHHHHHHHH-----H-----hcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCce
Q 042242 163 FYDEECPRVSKSNNFYYVLEDLLKE-----K-----LAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPF 232 (303)
Q Consensus 163 ~~~e~~~~~p~~~~~~y~~~k~~~e-----~-----~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (303)
...+ |+.+|...+ + ..+ +++.++||+.+++... ......... +..+.+.
T Consensus 150 ---------~~~~---Y~~sKaa~~~l~~~la~e~~~~g-i~v~~v~pg~~~~~~~--~~~~~~~~~------~~~~~~~ 208 (259)
T PRK12384 150 ---------HNSG---YSAAKFGGVGLTQSLALDLAEYG-ITVHSLMLGNLLKSPM--FQSLLPQYA------KKLGIKP 208 (259)
T ss_pred ---------CCch---hHHHHHHHHHHHHHHHHHHHHcC-cEEEEEecCCcccchh--hhhhhHHHH------HhcCCCh
Confidence 0223 666655432 1 123 9999999999887321 111111110 0000000
Q ss_pred -eeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 233 -VFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 233 -~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
......... ..+..+.+++|++.+++.++..... ...|+.|++.+++.
T Consensus 209 ~~~~~~~~~~-~~~~~~~~~~dv~~~~~~l~~~~~~-~~~G~~~~v~~g~~ 257 (259)
T PRK12384 209 DEVEQYYIDK-VPLKRGCDYQDVLNMLLFYASPKAS-YCTGQSINVTGGQV 257 (259)
T ss_pred HHHHHHHHHh-CcccCCCCHHHHHHHHHHHcCcccc-cccCceEEEcCCEE
Confidence 000000000 2233467889999999888765432 13458899998764
No 90
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.69 E-value=1e-15 Score=129.20 Aligned_cols=217 Identities=16% Similarity=0.069 Sum_probs=130.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHhc-------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLTL------- 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~------- 92 (303)
.+++|+||||+|+||++++++|+ ..|++|++++|++.+.. . ...+++++.+|+.|.+++.++++.
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~-~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALA-KEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG 81 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 35799999999999999999999 68999999999876532 1 124678899999999998887764
Q ss_pred cCceeEEeeccccc----CChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCc
Q 042242 93 LEDVTHIFWVTWAS----QFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 93 ~~~V~~~~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
+|.|+|+++..... .......+.+++|+.++..++..+... .....+++++++...+.+. .
T Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~------------~- 148 (258)
T PRK12429 82 VDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGS------------A- 148 (258)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCC------------C-
Confidence 46688886643221 122333457789999966666665543 1234455555543222110 0
Q ss_pred CCCCCCCCccchHHHHHHHH--------HHhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCc------
Q 042242 167 ECPRVSKSNNFYYVLEDLLK--------EKLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLP------ 231 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~--------e~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~------ 231 (303)
+..+ |...|... +..... +++.++||+.++++...... .. .....+.+
T Consensus 149 -----~~~~---y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~---~~------~~~~~~~~~~~~~~ 211 (258)
T PRK12429 149 -----GKAA---YVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQI---PD------LAKERGISEEEVLE 211 (258)
T ss_pred -----Ccch---hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhh---hh------hccccCCChHHHHH
Confidence 0122 44433222 222222 99999999999985322110 00 00000000
Q ss_pred -eeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 232 -FVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 232 -~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
...+. .....+++++|+|+++++++...... ..|+.|++.++.
T Consensus 212 ~~~~~~------~~~~~~~~~~d~a~~~~~l~~~~~~~-~~g~~~~~~~g~ 255 (258)
T PRK12429 212 DVLLPL------VPQKRFTTVEEIADYALFLASFAAKG-VTGQAWVVDGGW 255 (258)
T ss_pred HHHhcc------CCccccCCHHHHHHHHHHHcCccccC-ccCCeEEeCCCE
Confidence 00011 11234889999999998887654321 235889988764
No 91
>PRK06128 oxidoreductase; Provisional
Probab=99.69 E-value=6.6e-15 Score=127.19 Aligned_cols=216 Identities=13% Similarity=0.065 Sum_probs=134.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------c--cCCCeEEEEecCCCHHHHHHHHhc-----
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------I--QSSSYCFISCDLLNPLDIKRKLTL----- 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~--~~~~~~~~~~D~~~~~~l~~~~~~----- 92 (303)
++|+||||||+|+||++++++|+ ..|++|+++.|+..... . ...++.++.+|+.|.++++++++.
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~-~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFA-REGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHH-HcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 45899999999999999999999 68999988877543211 1 123577889999999888777653
Q ss_pred --cCceeEEeecccc-----cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 93 --LEDVTHIFWVTWA-----SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 93 --~~~V~~~~~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
+|.++|.++.... ..+.....+.+++|+.++..+++++......-.+++.+++...|....
T Consensus 133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~------------ 200 (300)
T PRK06128 133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSP------------ 200 (300)
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCC------------
Confidence 4668888764321 223445566899999999999999876522223455555433331110
Q ss_pred cCCCCCCCCccchHHHHHHHHH-----H---hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE-----K---LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGG 236 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e-----~---~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 236 (303)
.... |+.+|...+ + .... +++.+++|+.+.++..... ...... ...+.. ..|
T Consensus 201 ------~~~~---Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~-~~~~~~--~~~~~~--~~p----- 261 (300)
T PRK06128 201 ------TLLD---YASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSG-GQPPEK--IPDFGS--ETP----- 261 (300)
T ss_pred ------Cchh---HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccC-CCCHHH--HHHHhc--CCC-----
Confidence 0122 666655443 1 1112 9999999999998532211 000110 000100 112
Q ss_pred chhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc
Q 042242 237 TREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF 283 (303)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~ 283 (303)
+..+.+.+|+|.++++++...... ..|+.|++.++..+
T Consensus 262 --------~~r~~~p~dva~~~~~l~s~~~~~-~~G~~~~v~gg~~~ 299 (300)
T PRK06128 262 --------MKRPGQPVEMAPLYVLLASQESSY-VTGEVFGVTGGLLL 299 (300)
T ss_pred --------CCCCcCHHHHHHHHHHHhCccccC-ccCcEEeeCCCEeC
Confidence 112557789999988887654321 34689999987654
No 92
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.69 E-value=3e-15 Score=126.85 Aligned_cols=223 Identities=12% Similarity=0.070 Sum_probs=131.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc-----cCCCeEEEEecCCCHHHHHHHHhc-------c
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI-----QSSSYCFISCDLLNPLDIKRKLTL-------L 93 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~D~~~~~~l~~~~~~-------~ 93 (303)
++++++|||||+|+||++++++|+ +.|++|++++|++..... ...++.++.+|+.|++++.++++. +
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFA-EAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL 87 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 356899999999999999999999 689999999997654321 112468899999999998887763 5
Q ss_pred CceeEEeecc-c----ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCc-cEEEEeecccccccccCCCcccccCCcC
Q 042242 94 EDVTHIFWVT-W----ASQFASDMHKCCEQNKAMMCNALNAILPR--AKAL-KHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 94 ~~V~~~~~~~-~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~-~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
|.|+|+++.. . .........+.++.|+.++..+++++... .... .+++..++...+ .| ..
T Consensus 88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~------~~------~~ 155 (264)
T PRK12829 88 DVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGR------LG------YP 155 (264)
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccc------cC------CC
Confidence 6699987654 1 12233444568899999999998887543 1111 233333321111 00 00
Q ss_pred cCCCCCCCCccchHHHHHHHHH-----Hh-----cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee-
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE-----KL-----AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF- 234 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e-----~~-----~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 234 (303)
+..+ |+..|...+ .. .+ ++++++||+.++|+..... ... ..+..+.+...
T Consensus 156 ------~~~~---y~~~K~a~~~~~~~l~~~~~~~~-i~~~~l~pg~v~~~~~~~~---~~~------~~~~~~~~~~~~ 216 (264)
T PRK12829 156 ------GRTP---YAASKWAVVGLVKSLAIELGPLG-IRVNAILPGIVRGPRMRRV---IEA------RAQQLGIGLDEM 216 (264)
T ss_pred ------CCch---hHHHHHHHHHHHHHHHHHHhhcC-eEEEEEecCCcCChHHHHH---hhh------hhhccCCChhHH
Confidence 0122 555444332 11 23 9999999999998532111 000 00000111000
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
....... .....+++++|+|.+++.++...... ..|+.|+++++..
T Consensus 217 ~~~~~~~-~~~~~~~~~~d~a~~~~~l~~~~~~~-~~g~~~~i~~g~~ 262 (264)
T PRK12829 217 EQEYLEK-ISLGRMVEPEDIAATALFLASPAARY-ITGQAISVDGNVE 262 (264)
T ss_pred HHHHHhc-CCCCCCCCHHHHHHHHHHHcCccccC-ccCcEEEeCCCcc
Confidence 0000000 11223788999999988877543211 3458899988753
No 93
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.69 E-value=6.4e-15 Score=124.30 Aligned_cols=213 Identities=15% Similarity=0.119 Sum_probs=130.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc------c--cCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA------I--QSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~------~--~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
|+|+|+||||+|+||++++++|+ +.|++|++++|+..... . ...++.++.+|+++.+++.++++.
T Consensus 1 ~~k~vlItG~sg~iG~~la~~L~-~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12745 1 MRPVALVTGGRRGIGLGIARALA-AAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWG 79 (256)
T ss_pred CCcEEEEeCCCchHHHHHHHHHH-HCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 46899999999999999999999 68999999998754311 1 123578899999999888776653
Q ss_pred -cCceeEEeecccc------cCChHHHHHHHHHHHHHHHHHHHHHhhc---cCC-----ccEEEEeecccccccccCCCc
Q 042242 93 -LEDVTHIFWVTWA------SQFASDMHKCCEQNKAMMCNALNAILPR---AKA-----LKHVSLQTGMKHYVSLQGLPE 157 (303)
Q Consensus 93 -~~~V~~~~~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~-----~~~~~~~s~~~~y~~~~~~~g 157 (303)
+|.|+|+++.... ..+.....+.++.|+.++.++++++... ... ..+++.+++...+.+.
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----- 154 (256)
T PRK12745 80 RIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS----- 154 (256)
T ss_pred CCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC-----
Confidence 4568888764321 1233445568899999999998887654 111 2344554442221110
Q ss_pred ccccCCcCcCCCCCCCCccchHHHHHHHHH-----Hh-----cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhh
Q 042242 158 EKQVRFYDEECPRVSKSNNFYYVLEDLLKE-----KL-----AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKH 227 (303)
Q Consensus 158 ~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e-----~~-----~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~ 227 (303)
. +..+ |+.+|...+ +. .+ ++++++||+.+.++...... ... ......
T Consensus 155 -------~------~~~~---Y~~sK~a~~~~~~~l~~~~~~~g-i~v~~i~pg~v~t~~~~~~~---~~~---~~~~~~ 211 (256)
T PRK12745 155 -------P------NRGE---YCISKAGLSMAAQLFAARLAEEG-IGVYEVRPGLIKTDMTAPVT---AKY---DALIAK 211 (256)
T ss_pred -------C------CCcc---cHHHHHHHHHHHHHHHHHHHHhC-CEEEEEecCCCcCccccccc---hhH---Hhhhhh
Confidence 0 1223 665555443 11 23 89999999999884322110 111 000000
Q ss_pred CCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 228 LNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 228 ~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
...| +..+.+++|+++++..++..... ...|+.|++.++..
T Consensus 212 ~~~~-------------~~~~~~~~d~a~~i~~l~~~~~~-~~~G~~~~i~gg~~ 252 (256)
T PRK12745 212 GLVP-------------MPRWGEPEDVARAVAALASGDLP-YSTGQAIHVDGGLS 252 (256)
T ss_pred cCCC-------------cCCCcCHHHHHHHHHHHhCCccc-ccCCCEEEECCCee
Confidence 0111 11244778889888877654322 13458999988754
No 94
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.69 E-value=8e-15 Score=125.27 Aligned_cols=157 Identities=18% Similarity=0.188 Sum_probs=105.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHhc-------cCc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLTL-------LED 95 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~~-------~~~ 95 (303)
++++|+||||+|+||++++++|+ ..|++|++++|++.+.. ....++.++.+|+.|.+++.+.++. +|.
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~-~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~ 81 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAAL-AAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDV 81 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHH-hCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 35789999999999999999999 68999999999876432 1123577889999999988877764 466
Q ss_pred eeEEeeccccc----CChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCC
Q 042242 96 VTHIFWVTWAS----QFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECP 169 (303)
Q Consensus 96 V~~~~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~ 169 (303)
|+|+++..... .......+.+++|+.++.++++++... .....+++.+|+...+.+. +
T Consensus 82 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~----------------~ 145 (277)
T PRK06180 82 LVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITM----------------P 145 (277)
T ss_pred EEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCC----------------C
Confidence 88987653221 123334457899999999999986543 1122344444432121110 0
Q ss_pred CCCCCccchHHHHHHHHH-----Hh-----cCCcceEEecCCceeec
Q 042242 170 RVSKSNNFYYVLEDLLKE-----KL-----AGKVAWSVHRPGLLLGS 206 (303)
Q Consensus 170 ~~p~~~~~~y~~~k~~~e-----~~-----~~~~~~~ilRp~~v~G~ 206 (303)
+..+ |+.+|...+ .. .+ ++++++||+.+.++
T Consensus 146 --~~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~v~~i~Pg~v~t~ 186 (277)
T PRK06180 146 --GIGY---YCGSKFALEGISESLAKEVAPFG-IHVTAVEPGSFRTD 186 (277)
T ss_pred --Ccch---hHHHHHHHHHHHHHHHHHhhhhC-cEEEEEecCCcccC
Confidence 1223 666665433 11 13 99999999999874
No 95
>PRK09186 flagellin modification protein A; Provisional
Probab=99.69 E-value=4e-15 Score=125.54 Aligned_cols=217 Identities=12% Similarity=0.097 Sum_probs=129.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---------ccCCCeEEEEecCCCHHHHHHHHhc-----
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---------IQSSSYCFISCDLLNPLDIKRKLTL----- 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---------~~~~~~~~~~~D~~~~~~l~~~~~~----- 92 (303)
++|+|+||||+|+||+++++.|+ +.|++|++++|++++.. .....+.++.+|+.|++++.++++.
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~-~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAIL-EAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 36899999999999999999999 68999999999865431 0123456779999999998887765
Q ss_pred --cCceeEEeecc-------cccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCccccc
Q 042242 93 --LEDVTHIFWVT-------WASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQV 161 (303)
Q Consensus 93 --~~~V~~~~~~~-------~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~ 161 (303)
+|.|+|+++.. +...+.......+++|+.++..+++++... .....+++.+|+...+..+ .
T Consensus 82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------~ 153 (256)
T PRK09186 82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAP--------K 153 (256)
T ss_pred CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccc--------c
Confidence 46688886432 112233444457888998887777766543 1122345555442222111 0
Q ss_pred CCcCcCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCce
Q 042242 162 RFYDEECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPF 232 (303)
Q Consensus 162 ~~~~e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (303)
....+..+..+... |+.+|...+ ..... +++++++|+.++++. . ..+. ..... ..+
T Consensus 154 ~~~~~~~~~~~~~~---Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~---~----~~~~--~~~~~--~~~- 218 (256)
T PRK09186 154 FEIYEGTSMTSPVE---YAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQ---P----EAFL--NAYKK--CCN- 218 (256)
T ss_pred chhccccccCCcch---hHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCC---C----HHHH--HHHHh--cCC-
Confidence 01112222111122 676665443 11122 999999999887632 1 1110 00110 111
Q ss_pred eeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 233 VFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 233 ~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
. ..+.+++|+|+++++++...... ..|+.+.+.++
T Consensus 219 ---~---------~~~~~~~dva~~~~~l~~~~~~~-~~g~~~~~~~g 253 (256)
T PRK09186 219 ---G---------KGMLDPDDICGTLVFLLSDQSKY-ITGQNIIVDDG 253 (256)
T ss_pred ---c---------cCCCCHHHhhhhHhheecccccc-ccCceEEecCC
Confidence 1 12568899999999988655321 33577777665
No 96
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.68 E-value=3.8e-15 Score=125.55 Aligned_cols=213 Identities=15% Similarity=0.110 Sum_probs=129.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEE-ecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGI-ARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
++++|+||||+|+||++++++|+ +.|++|+++ .|+..+.. . ....++++.+|++|.+++.++++.
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~-~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 83 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLA-NDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ 83 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence 45899999999999999999999 689998775 45543221 1 123577899999999998887763
Q ss_pred -------cCceeEEeeccccc----CChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCccccc
Q 042242 93 -------LEDVTHIFWVTWAS----QFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQV 161 (303)
Q Consensus 93 -------~~~V~~~~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~ 161 (303)
+|.|+|+++..... .........++.|+.++.++++.+.+......+++.+++...+...
T Consensus 84 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~--------- 154 (254)
T PRK12746 84 IRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGF--------- 154 (254)
T ss_pred cccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCC---------
Confidence 56688887653221 1223334577899999999999988652222345554443232110
Q ss_pred CCcCcCCCCCCCCccchHHHHHHHHH-----Hh---cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCce
Q 042242 162 RFYDEECPRVSKSNNFYYVLEDLLKE-----KL---AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPF 232 (303)
Q Consensus 162 ~~~~e~~~~~p~~~~~~y~~~k~~~e-----~~---~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (303)
.+..+ |+.+|...+ .. ... +++++++|+.++++........ ..+ ..... .
T Consensus 155 ---------~~~~~---Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~-~~~---~~~~~--~--- 213 (254)
T PRK12746 155 ---------TGSIA---YGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDD-PEI---RNFAT--N--- 213 (254)
T ss_pred ---------CCCcc---hHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccC-hhH---HHHHH--h---
Confidence 00222 665554433 11 112 9999999999987421111000 000 00000 0
Q ss_pred eeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 233 VFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 233 ~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
. ..+..+.+++|+|.++.+++..+... ..|+.|++.++
T Consensus 214 ---~------~~~~~~~~~~dva~~~~~l~~~~~~~-~~g~~~~i~~~ 251 (254)
T PRK12746 214 ---S------SVFGRIGQVEDIADAVAFLASSDSRW-VTGQIIDVSGG 251 (254)
T ss_pred ---c------CCcCCCCCHHHHHHHHHHHcCcccCC-cCCCEEEeCCC
Confidence 0 11223568899999988877654321 34589999876
No 97
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.68 E-value=3e-15 Score=126.29 Aligned_cols=217 Identities=12% Similarity=0.085 Sum_probs=135.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----cc--CCCeEEEEecCCCHHHHHHHHhc------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----IQ--SSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~--~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
..+|+||||||+|+||++++++|+ +.|++|++++|++.+.. .. ..++..+++|+.|.++++++++.
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 86 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLA-QAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIG 86 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 356899999999999999999999 68999999999865422 11 12477889999999988887765
Q ss_pred -cCceeEEeeccccc----CChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCCcC
Q 042242 93 -LEDVTHIFWVTWAS----QFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 93 -~~~V~~~~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
.|.++|.++..... .......+.++.|+.++.++++++.+.. ....+++.+++...+ .+.
T Consensus 87 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~------------~~~- 153 (255)
T PRK07523 87 PIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSA------------LAR- 153 (255)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhc------------cCC-
Confidence 45688887653221 1233344578899999999999887651 123345554432111 000
Q ss_pred cCCCCCCCCccchHHHHHHHHH-----H-----hcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE-----K-----LAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e-----~-----~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
+ +..+ |+.+|...+ + ..+ +++.++||+.+.++........ ..+ ...+.. ..|
T Consensus 154 ---~--~~~~---y~~sK~a~~~~~~~~a~e~~~~g-i~v~~i~pg~~~t~~~~~~~~~-~~~--~~~~~~--~~~---- 215 (255)
T PRK07523 154 ---P--GIAP---YTATKGAVGNLTKGMATDWAKHG-LQCNAIAPGYFDTPLNAALVAD-PEF--SAWLEK--RTP---- 215 (255)
T ss_pred ---C--CCcc---HHHHHHHHHHHHHHHHHHhhHhC-eEEEEEEECcccCchhhhhccC-HHH--HHHHHh--cCC----
Confidence 0 0223 666555433 1 123 9999999999988532111000 010 000111 112
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
...+.+++|+|.++++++..+... ..|+.+++.++...|
T Consensus 216 ---------~~~~~~~~dva~~~~~l~~~~~~~-~~G~~i~~~gg~~~~ 254 (255)
T PRK07523 216 ---------AGRWGKVEELVGACVFLASDASSF-VNGHVLYVDGGITAS 254 (255)
T ss_pred ---------CCCCcCHHHHHHHHHHHcCchhcC-ccCcEEEECCCeecc
Confidence 112557899999998887654322 346889998876554
No 98
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.68 E-value=7.7e-15 Score=124.03 Aligned_cols=212 Identities=15% Similarity=0.116 Sum_probs=133.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------ccCCCeEEEEecCCCHHHHHHHHhc-----
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------IQSSSYCFISCDLLNPLDIKRKLTL----- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~D~~~~~~l~~~~~~----- 92 (303)
.++|++|||||+|+||++++++|+ +.|++|++++|+..... ....++.++.+|++|.+++.++++.
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 85 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLA-AHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAAL 85 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 356899999999999999999998 68999988877543211 1124577899999999988887764
Q ss_pred --cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhccC--CccEEEEeecccccccccCCCcccccCCc
Q 042242 93 --LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRAK--ALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 93 --~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~--~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
+|.|+|+++.... ........+.+++|+.++..+++++..... .-..++.+++...+
T Consensus 86 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~--------------- 150 (258)
T PRK09134 86 GPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVW--------------- 150 (258)
T ss_pred CCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhc---------------
Confidence 4668888764221 223344456899999999999998876521 11233332221111
Q ss_pred CcCCCCCC-CCccchHHHHHHHHH-----Hh----cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee
Q 042242 165 DEECPRVS-KSNNFYYVLEDLLKE-----KL----AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 165 ~e~~~~~p-~~~~~~y~~~k~~~e-----~~----~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
. ..| ..+ |+.+|...+ +. .. ++++.++|+.+........ ..+..... ..+
T Consensus 151 ~----~~p~~~~---Y~~sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~~-------~~~~~~~~--~~~--- 210 (258)
T PRK09134 151 N----LNPDFLS---YTLSKAALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQSP-------EDFARQHA--ATP--- 210 (258)
T ss_pred C----CCCCchH---HHHHHHHHHHHHHHHHHHhcCC-cEEEEeecccccCCcccCh-------HHHHHHHh--cCC---
Confidence 0 001 123 777775443 11 23 8999999998876321100 11111111 111
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHH
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWK 286 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~ 286 (303)
.+ ...+++|+|.+++.++..+... |+.|++.++..++|.
T Consensus 211 ~~----------~~~~~~d~a~~~~~~~~~~~~~---g~~~~i~gg~~~~~~ 249 (258)
T PRK09134 211 LG----------RGSTPEEIAAAVRYLLDAPSVT---GQMIAVDGGQHLAWL 249 (258)
T ss_pred CC----------CCcCHHHHHHHHHHHhcCCCcC---CCEEEECCCeecccc
Confidence 11 1457899999999998866543 488999888766654
No 99
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.67 E-value=9.6e-15 Score=122.76 Aligned_cols=216 Identities=13% Similarity=0.107 Sum_probs=130.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHhc-------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLTL------- 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~------- 92 (303)
+++++|||||+|+||++++++|+ +.|++|++++|+..... . ...++.++.+|+.|.+++++.++.
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~-~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFA-EEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-HCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999 68999999999765432 0 124588899999999988887763
Q ss_pred cCceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCc
Q 042242 93 LEDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 93 ~~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
.|.++|+++... ...+.....+.+++|+.++.++++++... ..+..+++++++...|.+..
T Consensus 81 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~------------- 147 (250)
T TIGR03206 81 VDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSS------------- 147 (250)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCC-------------
Confidence 566888875422 12223333457899999999998887643 11223455555433331110
Q ss_pred CCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccch-hhHHHHHHHHhhhCCCceeeC
Q 042242 167 ECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNF-LGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 235 (303)
...+ |+.+|...+ .. .+ ++++++||+.++++........ .........+.. ..+.
T Consensus 148 -----~~~~---Y~~sK~a~~~~~~~la~~~~~~~-i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--- 213 (250)
T TIGR03206 148 -----GEAV---YAACKGGLVAFSKTMAREHARHG-ITVNVVCPGPTDTALLDDICGGAENPEKLREAFTR--AIPL--- 213 (250)
T ss_pred -----CCch---HHHHHHHHHHHHHHHHHHHhHhC-cEEEEEecCcccchhHHhhhhccCChHHHHHHHHh--cCCc---
Confidence 0122 666553322 11 23 9999999999988522111000 000000000110 1110
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+ .+...+|+|++++.++..+... ..|+.+++.++.
T Consensus 214 ~----------~~~~~~dva~~~~~l~~~~~~~-~~g~~~~~~~g~ 248 (250)
T TIGR03206 214 G----------RLGQPDDLPGAILFFSSDDASF-ITGQVLSVSGGL 248 (250)
T ss_pred c----------CCcCHHHHHHHHHHHcCcccCC-CcCcEEEeCCCc
Confidence 1 1345678999998887654322 346889887764
No 100
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.67 E-value=1.4e-14 Score=122.54 Aligned_cols=218 Identities=11% Similarity=0.048 Sum_probs=127.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----c--cCCCeEEEEecCCCHHHHHHHHhc-------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----I--QSSSYCFISCDLLNPLDIKRKLTL------- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~--~~~~~~~~~~D~~~~~~l~~~~~~------- 92 (303)
+++|+++||||+|+||++++++|+ +.|++|++++|++.... . ...++.++.+|+.|.+++.++++.
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAA-AEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGR 84 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 456899999999999999999999 68999999999753211 1 123577889999999887776653
Q ss_pred cCceeEEeeccc-----ccCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCCcC
Q 042242 93 LEDVTHIFWVTW-----ASQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 93 ~~~V~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
+|.++|.++... ......+..+.+++|+.++..+++.+.... ....+++.+++...|+.
T Consensus 85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-------------- 150 (260)
T PRK12823 85 IDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI-------------- 150 (260)
T ss_pred CeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC--------------
Confidence 456888775321 122333444578899988877666655431 11224444444222210
Q ss_pred cCCCCCCCCccchHHHHHHHHH-----H---hcCC-cceEEecCCceeecCCCCccch---hh-HHHHHHHHhhh--CCC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE-----K---LAGK-VAWSVHRPGLLLGSSHRSLYNF---LG-CLCVYGAVCKH--LNL 230 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e-----~---~~~~-~~~~ilRp~~v~G~~~~~~~~~---~~-~~~~~~~~~~~--~~~ 230 (303)
+..+ |+.+|...+ + .... +++.+++|+.++++........ .. .......+.+. ...
T Consensus 151 ------~~~~---Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (260)
T PRK12823 151 ------NRVP---YSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSS 221 (260)
T ss_pred ------CCCc---cHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccC
Confidence 0223 666665443 1 1122 9999999999998521100000 00 00000000000 011
Q ss_pred ceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 231 PFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 231 ~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
|+ .-+.+++|+|.++++++...... ..|+.|++.+++
T Consensus 222 ~~-------------~~~~~~~dva~~~~~l~s~~~~~-~~g~~~~v~gg~ 258 (260)
T PRK12823 222 LM-------------KRYGTIDEQVAAILFLASDEASY-ITGTVLPVGGGD 258 (260)
T ss_pred Cc-------------ccCCCHHHHHHHHHHHcCccccc-ccCcEEeecCCC
Confidence 21 12447889999998887554221 345889987764
No 101
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=99.67 E-value=2.9e-15 Score=132.32 Aligned_cols=255 Identities=16% Similarity=0.131 Sum_probs=150.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcC-CC-eEEEEecCCcccc-------c---------------cCCCeEEEEecCCC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTA-NW-KVYGIARKPEITA-------I---------------QSSSYCFISCDLLN 82 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~-g~-~V~~~~r~~~~~~-------~---------------~~~~~~~~~~D~~~ 82 (303)
.+|+|+|||||||+|..+++.|++.. .. +|+++.|.+.... + ...++..+.||+.+
T Consensus 11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~ 90 (467)
T KOG1221|consen 11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISE 90 (467)
T ss_pred CCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccC
Confidence 57899999999999999999999332 33 5899988765431 0 12467888999987
Q ss_pred HH------HHHHHHhccCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCC
Q 042242 83 PL------DIKRKLTLLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLP 156 (303)
Q Consensus 83 ~~------~l~~~~~~~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~ 156 (303)
++ +++...+++++|+|+|+..--...-. -....|..|+.++++.|++. .++..++..|++........+
T Consensus 91 ~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~---~al~iNt~Gt~~~l~lak~~-~~l~~~vhVSTAy~n~~~~~i- 165 (467)
T KOG1221|consen 91 PDLGISESDLRTLADEVNIVIHSAATVRFDEPLD---VALGINTRGTRNVLQLAKEM-VKLKALVHVSTAYSNCNVGHI- 165 (467)
T ss_pred cccCCChHHHHHHHhcCCEEEEeeeeeccchhhh---hhhhhhhHhHHHHHHHHHHh-hhhheEEEeehhheecccccc-
Confidence 63 45556778888999977643322222 26899999999999999986 334444444332111000000
Q ss_pred cccccCCcCcC-----------------------CC-CCCCCccchHHHHHHHHH-----HhcCCcceEEecCCceeecC
Q 042242 157 EEKQVRFYDEE-----------------------CP-RVSKSNNFYYVLEDLLKE-----KLAGKVAWSVHRPGLLLGSS 207 (303)
Q Consensus 157 g~~~~~~~~e~-----------------------~~-~~p~~~~~~y~~~k~~~e-----~~~~~~~~~ilRp~~v~G~~ 207 (303)
.+.++.+. .+ .....|++ |...|.+.| ...+ ++.+|+||+.|...-
T Consensus 166 ---~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNT-YtfTKal~E~~i~~~~~~-lPivIiRPsiI~st~ 240 (467)
T KOG1221|consen 166 ---EEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNT-YTFTKALAEMVIQKEAEN-LPLVIIRPSIITSTY 240 (467)
T ss_pred ---cccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCc-eeehHhhHHHHHHhhccC-CCeEEEcCCceeccc
Confidence 01111100 01 11123444 344555555 3333 999999999999842
Q ss_pred ----CCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcC--cCCcCCCCceEEeecCC
Q 042242 208 ----HRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATN--DDISSTKGQAFNAINGP 281 (303)
Q Consensus 208 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~--~~~~~~~g~~yni~~~~ 281 (303)
+++..+............ .|.--.+..++ ....+++.+|.++.+++.++-. .........+||++.++
T Consensus 241 ~EP~pGWidn~~gp~g~i~g~g--kGvlr~~~~d~----~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~ 314 (467)
T KOG1221|consen 241 KEPFPGWIDNLNGPDGVIIGYG--KGVLRCFLVDP----KAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSN 314 (467)
T ss_pred cCCCCCccccCCCCceEEEEec--cceEEEEEEcc----ccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccc
Confidence 221111111111000011 12222333333 5678899999999998866511 11110113599999755
Q ss_pred --CccHHhhHHHHHHHhc
Q 042242 282 --RFTWKEIWPSIGKKFG 297 (303)
Q Consensus 282 --~~s~~e~~~~i~~~~g 297 (303)
+++|+++.+...+.+-
T Consensus 315 ~Np~t~~~~~e~~~~~~~ 332 (467)
T KOG1221|consen 315 DNPVTWGDFIELALRYFE 332 (467)
T ss_pred cCcccHHHHHHHHHHhcc
Confidence 7999999998777664
No 102
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.66 E-value=6.2e-15 Score=123.94 Aligned_cols=216 Identities=10% Similarity=0.012 Sum_probs=131.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc-----c-CCCeEEEEecCCCHHHHHHHHhcc-------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI-----Q-SSSYCFISCDLLNPLDIKRKLTLL------- 93 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~-----~-~~~~~~~~~D~~~~~~l~~~~~~~------- 93 (303)
.+++|+||||+|+||++++++|+ +.|++|++++|++.+... . ..++.++.+|+.|.+++.++++.+
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFA-AEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV 82 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 45799999999999999999999 689999999998754321 1 134778999999999998887654
Q ss_pred CceeEEeecccc-----cCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCCcCc
Q 042242 94 EDVTHIFWVTWA-----SQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 94 ~~V~~~~~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
|.|+|.++.... ..+.....+.++.|+.++..+++.+.... ....+++.+++...+...
T Consensus 83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------------- 148 (251)
T PRK07231 83 DILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPR-------------- 148 (251)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCC--------------
Confidence 668888764321 12334455688999999888888777541 223445555443222110
Q ss_pred CCCCCCCCccchHHHHHHHHH---------Hhc-CCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCC
Q 042242 167 ECPRVSKSNNFYYVLEDLLKE---------KLA-GKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGG 236 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~e---------~~~-~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 236 (303)
.+..+ |+.+|...+ +.. + ++++.++|+.+.++........ ........... .
T Consensus 149 ----~~~~~---y~~sk~~~~~~~~~~a~~~~~~~-i~v~~i~pg~~~t~~~~~~~~~-~~~~~~~~~~~--~------- 210 (251)
T PRK07231 149 ----PGLGW---YNASKGAVITLTKALAAELGPDK-IRVNAVAPVVVETGLLEAFMGE-PTPENRAKFLA--T------- 210 (251)
T ss_pred ----CCchH---HHHHHHHHHHHHHHHHHHhhhhC-eEEEEEEECccCCCcchhhhcc-cChHHHHHHhc--C-------
Confidence 00112 555443322 222 3 9999999999866321110000 00000000000 1
Q ss_pred chhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 237 TREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
.....+.+++|+|.++++++..+... ..|..+.+.++..
T Consensus 211 ------~~~~~~~~~~dva~~~~~l~~~~~~~-~~g~~~~~~gg~~ 249 (251)
T PRK07231 211 ------IPLGRLGTPEDIANAALFLASDEASW-ITGVTLVVDGGRC 249 (251)
T ss_pred ------CCCCCCcCHHHHHHHHHHHhCccccC-CCCCeEEECCCcc
Confidence 11122568899999999988655432 3457777776643
No 103
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.65 E-value=8.7e-15 Score=123.15 Aligned_cols=213 Identities=15% Similarity=0.055 Sum_probs=130.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---c-----cCCCeEEEEecCCCHHHHHHHHhc-------
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---I-----QSSSYCFISCDLLNPLDIKRKLTL------- 92 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---~-----~~~~~~~~~~D~~~~~~l~~~~~~------- 92 (303)
+++|+||||+|+||++++++|+ +.|++|+++.|+..... . ...++.++.+|+++.+++.+.++.
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLA-KEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV 84 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence 5899999999999999999999 68999888776532211 0 113466788999999988777653
Q ss_pred cCceeEEeeccccc----CChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCC
Q 042242 93 LEDVTHIFWVTWAS----QFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC 168 (303)
Q Consensus 93 ~~~V~~~~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~ 168 (303)
.|.|+|+++..... .......+.+++|+.+...+++++.+....-..++..++...|.
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------------------ 146 (252)
T PRK06077 85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIR------------------ 146 (252)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccC------------------
Confidence 46689987653221 12222345789999999999998886522223444444432221
Q ss_pred CCCCCCccchHHHHHHHHH---------HhcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchh
Q 042242 169 PRVSKSNNFYYVLEDLLKE---------KLAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTRE 239 (303)
Q Consensus 169 ~~~p~~~~~~y~~~k~~~e---------~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 239 (303)
+..+..+ |+.+|...+ +..+ +.+.+++|+.+.++............ . ....+ .
T Consensus 147 ~~~~~~~---Y~~sK~~~~~~~~~l~~~~~~~-i~v~~v~Pg~i~t~~~~~~~~~~~~~-~-~~~~~----~-------- 208 (252)
T PRK06077 147 PAYGLSI---YGAMKAAVINLTKYLALELAPK-IRVNAIAPGFVKTKLGESLFKVLGMS-E-KEFAE----K-------- 208 (252)
T ss_pred CCCCchH---HHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeCCccChHHHhhhhccccc-H-HHHHH----h--------
Confidence 0111233 777665443 1123 88899999998774211100000000 0 00000 0
Q ss_pred hhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 240 IWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 240 ~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
. .....+++++|+|++++.++..+... |+.|++.+++.
T Consensus 209 -~-~~~~~~~~~~dva~~~~~~~~~~~~~---g~~~~i~~g~~ 246 (252)
T PRK06077 209 -F-TLMGKILDPEEVAEFVAAILKIESIT---GQVFVLDSGES 246 (252)
T ss_pred -c-CcCCCCCCHHHHHHHHHHHhCccccC---CCeEEecCCee
Confidence 0 11123689999999999988765443 48999998864
No 104
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.65 E-value=3.1e-14 Score=121.27 Aligned_cols=220 Identities=18% Similarity=0.154 Sum_probs=144.8
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEeecccccCC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWASQF 108 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~~~~ 108 (303)
++|+||||||++|++++++|+ ..|++|+++.|++........++++..+|+.++.++...+++.+.++++..... ...
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~-~~~~~v~~~~r~~~~~~~~~~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~-~~~ 78 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELL-ARGHEVRAAVRNPEAAAALAGGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLD-GSD 78 (275)
T ss_pred CeEEEEecccchHHHHHHHHH-hCCCEEEEEEeCHHHHHhhcCCcEEEEeccCCHhHHHHHhccccEEEEEecccc-ccc
Confidence 479999999999999999999 679999999999887653237899999999999999999999987666644332 111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHHH
Q 042242 109 ASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKEK 188 (303)
Q Consensus 109 ~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e~ 188 (303)
. ..........+..+.+. ....++...+. .+. .... ..+ |...+...|.
T Consensus 79 -~----~~~~~~~~~~~~a~~a~---~~~~~~~~~s~---~~~-------------~~~~----~~~---~~~~~~~~e~ 127 (275)
T COG0702 79 -A----FRAVQVTAVVRAAEAAG---AGVKHGVSLSV---LGA-------------DAAS----PSA---LARAKAAVEA 127 (275)
T ss_pred -c----hhHHHHHHHHHHHHHhc---CCceEEEEecc---CCC-------------CCCC----ccH---HHHHHHHHHH
Confidence 1 12222333333333333 23444444331 100 0000 222 6666666663
Q ss_pred h---cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCc
Q 042242 189 L---AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATND 265 (303)
Q Consensus 189 ~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~ 265 (303)
. .+ ++++++|+..+|..... . . ...... .+.+....+ ......++.+|++..+...+..+
T Consensus 128 ~l~~sg-~~~t~lr~~~~~~~~~~-~------~-~~~~~~--~~~~~~~~~------~~~~~~i~~~d~a~~~~~~l~~~ 190 (275)
T COG0702 128 ALRSSG-IPYTTLRRAAFYLGAGA-A------F-IEAAEA--AGLPVIPRG------IGRLSPIAVDDVAEALAAALDAP 190 (275)
T ss_pred HHHhcC-CCeEEEecCeeeeccch-h------H-HHHHHh--hCCceecCC------CCceeeeEHHHHHHHHHHHhcCC
Confidence 2 24 99999998777762111 1 0 111111 133333332 12345788899999998888877
Q ss_pred CCcCCCCceEEeecCCCccHHhhHHHHHHHhcccCC
Q 042242 266 DISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVP 301 (303)
Q Consensus 266 ~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 301 (303)
... +++|.+++++..+..++.+.+....|++..
T Consensus 191 ~~~---~~~~~l~g~~~~~~~~~~~~l~~~~gr~~~ 223 (275)
T COG0702 191 ATA---GRTYELAGPEALTLAELASGLDYTIGRPVG 223 (275)
T ss_pred ccc---CcEEEccCCceecHHHHHHHHHHHhCCcce
Confidence 644 489999999999999999999999998864
No 105
>PRK05717 oxidoreductase; Validated
Probab=99.65 E-value=1.1e-14 Score=122.87 Aligned_cols=216 Identities=13% Similarity=0.049 Sum_probs=131.7
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHhc-------
Q 042242 24 EVDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLTL------- 92 (303)
Q Consensus 24 ~~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~~------- 92 (303)
.+.++|+|+||||+|+||++++++|+ +.|++|++++|+..+.. .....+.++++|+.+.+++.++++.
T Consensus 6 ~~~~~k~vlItG~sg~IG~~~a~~l~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 84 (255)
T PRK05717 6 PGHNGRVALVTGAARGIGLGIAAWLI-AEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGR 84 (255)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHH-HcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 34467899999999999999999999 68999999988764322 1124577899999999887665543
Q ss_pred cCceeEEeeccccc------CChHHHHHHHHHHHHHHHHHHHHHhhcc-CCccEEEEeecccccccccCCCcccccCCcC
Q 042242 93 LEDVTHIFWVTWAS------QFASDMHKCCEQNKAMMCNALNAILPRA-KALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 93 ~~~V~~~~~~~~~~------~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
+|.++|+++..... .+..+..+.+++|+.++.++++++.... ..-.+++.+++...+.+. +
T Consensus 85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~----------~-- 152 (255)
T PRK05717 85 LDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSE----------P-- 152 (255)
T ss_pred CCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCC----------C--
Confidence 46688987653221 1334445689999999999999997531 111244444432221000 0
Q ss_pred cCCCCCCCCccchHHHHHHHHH---------HhcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE---------KLAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGG 236 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e---------~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 236 (303)
...+ |+.+|...+ +..+ +++.+++|+.+.++.+... ....+. .... ...+
T Consensus 153 ------~~~~---Y~~sKaa~~~~~~~la~~~~~~-i~v~~i~Pg~i~t~~~~~~--~~~~~~---~~~~-~~~~----- 211 (255)
T PRK05717 153 ------DTEA---YAASKGGLLALTHALAISLGPE-IRVNAVSPGWIDARDPSQR--RAEPLS---EADH-AQHP----- 211 (255)
T ss_pred ------CCcc---hHHHHHHHHHHHHHHHHHhcCC-CEEEEEecccCcCCccccc--cchHHH---HHHh-hcCC-----
Confidence 0123 666665443 1123 8999999999988532211 001110 0000 0111
Q ss_pred chhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 237 TREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
...+.+++|+|.++++++...... ..|+.+.+.++..
T Consensus 212 --------~~~~~~~~~va~~~~~l~~~~~~~-~~g~~~~~~gg~~ 248 (255)
T PRK05717 212 --------AGRVGTVEDVAAMVAWLLSRQAGF-VTGQEFVVDGGMT 248 (255)
T ss_pred --------CCCCcCHHHHHHHHHHHcCchhcC-ccCcEEEECCCce
Confidence 112557789999988877543221 2357787766543
No 106
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.65 E-value=6.8e-15 Score=124.27 Aligned_cols=217 Identities=15% Similarity=0.109 Sum_probs=131.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHhc-------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLTL------- 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~------- 92 (303)
++|+|+||||+|+||++++++|+ ..|++|++++|++.... . ...++.++.+|++|.+++..+++.
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAA-RAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR 82 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999 68999999999865422 0 123578899999999988777754
Q ss_pred cCceeEEeecccc-----cCChHHHHHHHHHHHHHHHHHHHHHhhcc-CCccEEEEeecccccccccCCCcccccCCcCc
Q 042242 93 LEDVTHIFWVTWA-----SQFASDMHKCCEQNKAMMCNALNAILPRA-KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 93 ~~~V~~~~~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
+|.|+|.++.... .....+..+.++.|+.++..+++++.... ..-.+++.+++...+. +.
T Consensus 83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~------------~~-- 148 (258)
T PRK07890 83 VDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRH------------SQ-- 148 (258)
T ss_pred ccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhcc------------CC--
Confidence 4568888754221 22344555689999999999999987641 1112455554421210 00
Q ss_pred CCCCCCCCccchHHHHHHHHH-----Hh---cCC-cceEEecCCceeecCCCCccchh------hHHHHHHHHhhhCCCc
Q 042242 167 ECPRVSKSNNFYYVLEDLLKE-----KL---AGK-VAWSVHRPGLLLGSSHRSLYNFL------GCLCVYGAVCKHLNLP 231 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~e-----~~---~~~-~~~~ilRp~~v~G~~~~~~~~~~------~~~~~~~~~~~~~~~~ 231 (303)
.+... |+.+|...+ +. ... ++++++||+.++++......... .....+..+.+ .
T Consensus 149 ----~~~~~---Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-- 217 (258)
T PRK07890 149 ----PKYGA---YKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAA--N-- 217 (258)
T ss_pred ----CCcch---hHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhh--c--
Confidence 00122 555554433 11 112 99999999999995321110000 00000000000 0
Q ss_pred eeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 232 FVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 232 ~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
.....+.+++|+|.++++++..... ...|+.+.+.++.
T Consensus 218 -----------~~~~~~~~~~dva~a~~~l~~~~~~-~~~G~~i~~~gg~ 255 (258)
T PRK07890 218 -----------SDLKRLPTDDEVASAVLFLASDLAR-AITGQTLDVNCGE 255 (258)
T ss_pred -----------CCccccCCHHHHHHHHHHHcCHhhh-CccCcEEEeCCcc
Confidence 1112356789999999888764321 1335667666654
No 107
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.65 E-value=2.5e-14 Score=119.85 Aligned_cols=215 Identities=11% Similarity=0.060 Sum_probs=134.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc--cCCCeEEEEecCCCHHHHHHHHhc---cCceeEEe
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI--QSSSYCFISCDLLNPLDIKRKLTL---LEDVTHIF 100 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~D~~~~~~l~~~~~~---~~~V~~~~ 100 (303)
+++++++||||+|+||+++++.|+ +.|++|++++|++++... ...+..++.+|+.+.+++.+.++. +|.|+|.+
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~a 85 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALA-QRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCA 85 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECC
Confidence 346899999999999999999999 689999999998654321 122467889999999988888875 56688887
Q ss_pred eccccc----CChHHHHHHHHHHHHHHHHHHHHHhhcc-CC--ccEEEEeecccccccccCCCcccccCCcCcCCCCCCC
Q 042242 101 WVTWAS----QFASDMHKCCEQNKAMMCNALNAILPRA-KA--LKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSK 173 (303)
Q Consensus 101 ~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~--~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~ 173 (303)
+..... .......+.++.|+.++.++++++.+.. .+ ..+++++++...|... . +.
T Consensus 86 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~------~~ 147 (245)
T PRK07060 86 GIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL------------P------DH 147 (245)
T ss_pred CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC------------C------CC
Confidence 653221 2233444578899999999999887641 11 1345554443222110 0 01
Q ss_pred CccchHHHHHHHHH-----Hh---cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhh
Q 042242 174 SNNFYYVLEDLLKE-----KL---AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEY 244 (303)
Q Consensus 174 ~~~~~y~~~k~~~e-----~~---~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 244 (303)
.+ |+.+|...+ +. ... ++++.+||+.++++....... ... ....+.. .. +
T Consensus 148 ~~---y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~--~~~-~~~~~~~--~~----~--------- 206 (245)
T PRK07060 148 LA---YCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWS--DPQ-KSGPMLA--AI----P--------- 206 (245)
T ss_pred cH---hHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhcc--CHH-HHHHHHh--cC----C---------
Confidence 22 666555443 11 112 999999999999853221111 000 0000110 01 1
Q ss_pred cccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 245 CLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 245 ~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
...+++++|+|++++.++..+... ..|+.+++.++.
T Consensus 207 ~~~~~~~~d~a~~~~~l~~~~~~~-~~G~~~~~~~g~ 242 (245)
T PRK07060 207 LGRFAEVDDVAAPILFLLSDAASM-VSGVSLPVDGGY 242 (245)
T ss_pred CCCCCCHHHHHHHHHHHcCcccCC-ccCcEEeECCCc
Confidence 112678899999999988765432 346888887764
No 108
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.65 E-value=3.2e-14 Score=121.09 Aligned_cols=156 Identities=16% Similarity=0.210 Sum_probs=107.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhcc-------CceeEEe
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLL-------EDVTHIF 100 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-------~~V~~~~ 100 (303)
+++|+||||+|+||++++++|+ +.|++|++++|++.+.. ...+++++++|+.|.++++++++.+ |.++|++
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~-~~g~~V~~~~r~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~a 81 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLA-RAGYRVFGTSRNPARAA-PIPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNA 81 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHH-HCCCEEEEEeCChhhcc-ccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 4789999999999999999999 68999999999865532 2357889999999999998888753 6688887
Q ss_pred ecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCC
Q 042242 101 WVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKS 174 (303)
Q Consensus 101 ~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~ 174 (303)
+.... .....+..+.+++|+.++..+++++... .....+++.+++...+... | . ..
T Consensus 82 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~------~--~~ 143 (270)
T PRK06179 82 GVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPA----------P------Y--MA 143 (270)
T ss_pred CCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCC----------C------C--cc
Confidence 65322 1233445568999999999998886543 1223455555542222110 0 0 12
Q ss_pred ccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecC
Q 042242 175 NNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSS 207 (303)
Q Consensus 175 ~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~ 207 (303)
. |+.+|...+ .. .+ +++++++|+.+.++.
T Consensus 144 ~---Y~~sK~a~~~~~~~l~~el~~~g-i~v~~v~pg~~~t~~ 182 (270)
T PRK06179 144 L---YAASKHAVEGYSESLDHEVRQFG-IRVSLVEPAYTKTNF 182 (270)
T ss_pred H---HHHHHHHHHHHHHHHHHHHhhhC-cEEEEEeCCCccccc
Confidence 2 665554433 11 23 999999999998753
No 109
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.65 E-value=2.7e-14 Score=118.79 Aligned_cols=209 Identities=15% Similarity=0.144 Sum_probs=128.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHh------ccCceeEEe
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLT------LLEDVTHIF 100 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~------~~~~V~~~~ 100 (303)
.+|+|+||||+|+||++++++|+ +.|++|++++|+..+. ...+++.+|+.|.+++.+.++ ++|.|+|++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~-~~G~~v~~~~r~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a 76 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLA-NLGHQVIGIARSAIDD----FPGELFACDLADIEQTAATLAQINEIHPVDAIVNNV 76 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHH-HCCCEEEEEeCCcccc----cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECC
Confidence 35799999999999999999999 6899999999987652 123578899999998877776 356688887
Q ss_pred ecccccC----ChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCC
Q 042242 101 WVTWASQ----FASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKS 174 (303)
Q Consensus 101 ~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~ 174 (303)
+...... +..+..+.++.|+.++.++..++.... ....+++.+++...|+.+ ...
T Consensus 77 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------------------~~~ 137 (234)
T PRK07577 77 GIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGAL-------------------DRT 137 (234)
T ss_pred CCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCC-------------------Cch
Confidence 6532221 234444578899999888877765431 123345555443233111 012
Q ss_pred ccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhh
Q 042242 175 NNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEY 244 (303)
Q Consensus 175 ~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 244 (303)
+ |+.+|...+ .. .+ ++++++||+.+..+......+..... ...... ..+
T Consensus 138 ~---Y~~sK~a~~~~~~~~a~e~~~~g-i~v~~i~pg~~~t~~~~~~~~~~~~~--~~~~~~--~~~------------- 196 (234)
T PRK07577 138 S---YSAAKSALVGCTRTWALELAEYG-ITVNAVAPGPIETELFRQTRPVGSEE--EKRVLA--SIP------------- 196 (234)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHhhC-cEEEEEecCcccCcccccccccchhH--HHHHhh--cCC-------------
Confidence 3 666554433 11 23 99999999999874321111100000 000000 111
Q ss_pred cccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 245 CLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 245 ~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+....+.+|+|.++++++..+... ..|+.+++.++.
T Consensus 197 ~~~~~~~~~~a~~~~~l~~~~~~~-~~g~~~~~~g~~ 232 (234)
T PRK07577 197 MRRLGTPEEVAAAIAFLLSDDAGF-ITGQVLGVDGGG 232 (234)
T ss_pred CCCCcCHHHHHHHHHHHhCcccCC-ccceEEEecCCc
Confidence 111447789999999988654321 345888887664
No 110
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.64 E-value=2.2e-14 Score=122.39 Aligned_cols=210 Identities=17% Similarity=0.090 Sum_probs=129.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHhc-------c
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLTL-------L 93 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~-------~ 93 (303)
.|+++||||+|+||++++++|+ +.|++|++++|+..... . ...++.++.+|+.|.+++.++++. +
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELA-AAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI 88 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 4799999999999999999999 68999999998764321 0 123577889999999998887764 4
Q ss_pred CceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcC
Q 042242 94 EDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEE 167 (303)
Q Consensus 94 ~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~ 167 (303)
|.++|+++.... ........+.++.|+.++.++++.+... .....+++++++...|...
T Consensus 89 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~--------------- 153 (274)
T PRK07775 89 EVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQR--------------- 153 (274)
T ss_pred CEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCC---------------
Confidence 568888765322 1122334456899999999999887643 1222345555543333110
Q ss_pred CCCCCCCccchHHHHHHHHH-----Hh---cCC-cceEEecCCceeecCCCCccchhhHHHHH-HHHhhhCCCceeeCCc
Q 042242 168 CPRVSKSNNFYYVLEDLLKE-----KL---AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVY-GAVCKHLNLPFVFGGT 237 (303)
Q Consensus 168 ~~~~p~~~~~~y~~~k~~~e-----~~---~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~ 237 (303)
+ +..+ |+.+|...+ +. ... ++++++||+.+.+......... ....+ ..... ..+
T Consensus 154 -~--~~~~---Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~--~~~~~~~~~~~-------~~~- 217 (274)
T PRK07775 154 -P--HMGA---YGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAE--VIGPMLEDWAK-------WGQ- 217 (274)
T ss_pred -C--Ccch---HHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChh--hhhHHHHHHHH-------hcc-
Confidence 0 0223 676665554 21 112 9999999988865311111000 00000 00000 011
Q ss_pred hhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEee
Q 042242 238 REIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAI 278 (303)
Q Consensus 238 ~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~ 278 (303)
.....+.+++|+|++++.++..+. ++.+||+.
T Consensus 218 -----~~~~~~~~~~dva~a~~~~~~~~~----~~~~~~~~ 249 (274)
T PRK07775 218 -----ARHDYFLRASDLARAITFVAETPR----GAHVVNME 249 (274)
T ss_pred -----cccccccCHHHHHHHHHHHhcCCC----CCCeeEEe
Confidence 112236889999999999887652 23688886
No 111
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.64 E-value=2.9e-14 Score=119.87 Aligned_cols=214 Identities=12% Similarity=0.038 Sum_probs=130.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEE-ecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGI-ARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
.+++++||||+|+||++++++|+ +.|++|+++ .|+..+.. ....++.++.+|++|++++..+++.
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~-~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLA-EEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35799999999999999999999 689997764 66543321 1123577889999999998887764
Q ss_pred -cCceeEEeeccccc----CChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCCcC
Q 042242 93 -LEDVTHIFWVTWAS----QFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 93 -~~~V~~~~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
+|.|+|.++..... .........+++|+.++..+++++.+.. .+..+++++|+...+.
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--------------- 146 (250)
T PRK08063 82 RLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIR--------------- 146 (250)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcc---------------
Confidence 46688887643221 1233333468899999999999887651 2233555554421110
Q ss_pred cCCCCCCCCccchHHHHHHHHH-----Hh-----cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE-----KL-----AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e-----~~-----~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
+..+... |+.+|...+ .. .+ +++++++|+.+..+....... .......... ..+
T Consensus 147 ---~~~~~~~---y~~sK~a~~~~~~~~~~~~~~~~-i~v~~i~pg~v~t~~~~~~~~---~~~~~~~~~~--~~~---- 210 (250)
T PRK08063 147 ---YLENYTT---VGVSKAALEALTRYLAVELAPKG-IAVNAVSGGAVDTDALKHFPN---REELLEDARA--KTP---- 210 (250)
T ss_pred ---CCCCccH---HHHHHHHHHHHHHHHHHHHhHhC-eEEEeEecCcccCchhhhccC---chHHHHHHhc--CCC----
Confidence 0000122 666555444 11 23 899999999998743221100 0000000100 001
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
+..+++++|+|+++++++..+... ..|+.|++.++..
T Consensus 211 ---------~~~~~~~~dva~~~~~~~~~~~~~-~~g~~~~~~gg~~ 247 (250)
T PRK08063 211 ---------AGRMVEPEDVANAVLFLCSPEADM-IRGQTIIVDGGRS 247 (250)
T ss_pred ---------CCCCcCHHHHHHHHHHHcCchhcC-ccCCEEEECCCee
Confidence 112578899999999888665322 3458888887754
No 112
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.64 E-value=4e-14 Score=118.82 Aligned_cols=210 Identities=14% Similarity=0.102 Sum_probs=130.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc------c--cCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA------I--QSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~------~--~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
.+++++||||+|+||++++++|+ ..|++|+++.++..... . ...++.++.+|+.|.+++.++++.
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~-~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALA-QEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG 83 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999 68999887765432211 1 123578899999999998887776
Q ss_pred -cCceeEEeeccccc----CChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCCcC
Q 042242 93 -LEDVTHIFWVTWAS----QFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 93 -~~~V~~~~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
+|.|+|+++..... .......+.+++|+.++..+++++.... ....+++.+++...+.+.
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------- 150 (247)
T PRK12935 84 KVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG------------- 150 (247)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC-------------
Confidence 46688887653221 2234556688999999999999987541 112244444432111000
Q ss_pred cCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
.+..+ |+.+|...+ +. .+ +++++++|+.+.++..... . ... ...... .
T Consensus 151 -----~~~~~---Y~~sK~a~~~~~~~l~~~~~~~~-i~v~~v~pg~v~t~~~~~~-~--~~~--~~~~~~--~------ 208 (247)
T PRK12935 151 -----FGQTN---YSAAKAGMLGFTKSLALELAKTN-VTVNAICPGFIDTEMVAEV-P--EEV--RQKIVA--K------ 208 (247)
T ss_pred -----CCCcc---hHHHHHHHHHHHHHHHHHHHHcC-cEEEEEEeCCCcChhhhhc-c--HHH--HHHHHH--h------
Confidence 01223 666655332 11 13 9999999999876321110 0 010 000101 1
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
.....+.+++|+++++++++..... ..|+.||+.++.
T Consensus 209 -------~~~~~~~~~edva~~~~~~~~~~~~--~~g~~~~i~~g~ 245 (247)
T PRK12935 209 -------IPKKRFGQADEIAKGVVYLCRDGAY--ITGQQLNINGGL 245 (247)
T ss_pred -------CCCCCCcCHHHHHHHHHHHcCcccC--ccCCEEEeCCCc
Confidence 1112357889999999998865432 346899998874
No 113
>PRK06182 short chain dehydrogenase; Validated
Probab=99.64 E-value=2.3e-14 Score=122.15 Aligned_cols=158 Identities=20% Similarity=0.189 Sum_probs=103.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHh-------ccCceeE
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLT-------LLEDVTH 98 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~-------~~~~V~~ 98 (303)
.+++|+||||+|+||++++++|+ ..|++|++++|++.+.. ....+++++.+|++|.+++.++++ ++|.++|
T Consensus 2 ~~k~vlItGasggiG~~la~~l~-~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLA-AQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 35799999999999999999999 68999999999876532 223468899999999999888776 4566888
Q ss_pred Eeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCCCCC
Q 042242 99 IFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVS 172 (303)
Q Consensus 99 ~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p 172 (303)
.++.... .....+....+++|+.++..+++.+.+. .....+++.+++...+. ..+ .
T Consensus 81 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~----------~~~------~-- 142 (273)
T PRK06182 81 NAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKI----------YTP------L-- 142 (273)
T ss_pred CCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcC----------CCC------C--
Confidence 8765332 1233445568899998866555554332 11123444444321110 000 0
Q ss_pred CCccchHHHHHHHHHH--------hcCC-cceEEecCCceeec
Q 042242 173 KSNNFYYVLEDLLKEK--------LAGK-VAWSVHRPGLLLGS 206 (303)
Q Consensus 173 ~~~~~~y~~~k~~~e~--------~~~~-~~~~ilRp~~v~G~ 206 (303)
... |+.+|...+. .... ++++++||+.+.++
T Consensus 143 ~~~---Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~ 182 (273)
T PRK06182 143 GAW---YHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTE 182 (273)
T ss_pred ccH---hHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccc
Confidence 112 6665554441 1222 99999999999874
No 114
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.64 E-value=8.3e-14 Score=117.83 Aligned_cols=221 Identities=18% Similarity=0.125 Sum_probs=131.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHh-------ccCceeE
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLT-------LLEDVTH 98 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~-------~~~~V~~ 98 (303)
.++|+|+||||+|+||++++++|. +.|++|++++|+.... ...++.++++|+.|.+++++.++ .+|.|+|
T Consensus 7 ~~~k~vlItGas~gIG~~ia~~l~-~~G~~v~~~~r~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 83 (260)
T PRK06523 7 LAGKRALVTGGTKGIGAATVARLL-EAGARVVTTARSRPDD--LPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVH 83 (260)
T ss_pred CCCCEEEEECCCCchhHHHHHHHH-HCCCEEEEEeCChhhh--cCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 456899999999999999999999 6899999999986542 23467889999999988776554 3466888
Q ss_pred Eeeccc------ccCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCCcCcCCCC
Q 042242 99 IFWVTW------ASQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPR 170 (303)
Q Consensus 99 ~~~~~~------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~ 170 (303)
.++... ...+.....+.+++|+.++..+++++.... ....+++.+++...+. +..+
T Consensus 84 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~------------~~~~---- 147 (260)
T PRK06523 84 VLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRL------------PLPE---- 147 (260)
T ss_pred CCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccC------------CCCC----
Confidence 876321 112334455688999999988877765431 1112344444321210 0000
Q ss_pred CCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhh-----HHHHHH-HHhhh-CCCcee
Q 042242 171 VSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLG-----CLCVYG-AVCKH-LNLPFV 233 (303)
Q Consensus 171 ~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~-----~~~~~~-~~~~~-~~~~~~ 233 (303)
+..+ |+.+|...+ +. .+ +++.+++|+.+.++.......... ...... .+.+. .+.|
T Consensus 148 -~~~~---Y~~sK~a~~~l~~~~a~~~~~~g-i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-- 220 (260)
T PRK06523 148 -STTA---YAAAKAALSTYSKSLSKEVAPKG-VRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIP-- 220 (260)
T ss_pred -Ccch---hHHHHHHHHHHHHHHHHHHhhcC-cEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCc--
Confidence 0223 666555433 11 23 999999999998743211000000 000000 00000 0111
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
+..+.+++|+|.++++++..+... ..|+.+.+.++...|
T Consensus 221 -----------~~~~~~~~~va~~~~~l~s~~~~~-~~G~~~~vdgg~~~~ 259 (260)
T PRK06523 221 -----------LGRPAEPEEVAELIAFLASDRAAS-ITGTEYVIDGGTVPT 259 (260)
T ss_pred -----------cCCCCCHHHHHHHHHHHhCccccc-ccCceEEecCCccCC
Confidence 112457789999999888654322 445889888876554
No 115
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.64 E-value=4.6e-14 Score=118.75 Aligned_cols=216 Identities=12% Similarity=0.067 Sum_probs=129.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc------cCCCeEEEEecCCCHHHHHHHHhc-------c
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI------QSSSYCFISCDLLNPLDIKRKLTL-------L 93 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~D~~~~~~l~~~~~~-------~ 93 (303)
++|+++||||+|+||++++++|+ +.|++|++++|+...... ...++.++++|+.|.+++.++++. +
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFA-REGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL 82 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHH-HCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999 689999999998654321 123478899999999998887763 4
Q ss_pred CceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcC
Q 042242 94 EDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEE 167 (303)
Q Consensus 94 ~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~ 167 (303)
|.|+|+++.... ..+.....+.+++|+.++.++.+.+... .....+++.+++...+.+.
T Consensus 83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~--------------- 147 (252)
T PRK06138 83 DVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGG--------------- 147 (252)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCC---------------
Confidence 668888765321 2233444457899999998877776543 1122344444432111000
Q ss_pred CCCCCCCccchHHHHHHHHH-----H----h-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCc
Q 042242 168 CPRVSKSNNFYYVLEDLLKE-----K----L-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGT 237 (303)
Q Consensus 168 ~~~~p~~~~~~y~~~k~~~e-----~----~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 237 (303)
....+ |+.+|...+ + . .+ ++++++||+.++++.................... . .
T Consensus 148 ---~~~~~---Y~~sK~a~~~~~~~l~~~~~~~~-i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~--~------~- 211 (252)
T PRK06138 148 ---RGRAA---YVASKGAIASLTRAMALDHATDG-IRVNAVAPGTIDTPYFRRIFARHADPEALREALR--A------R- 211 (252)
T ss_pred ---CCccH---HHHHHHHHHHHHHHHHHHHHhcC-eEEEEEEECCccCcchhhhhccccChHHHHHHHH--h------c-
Confidence 00223 666554433 1 1 23 9999999999988532111000000000000000 0 0
Q ss_pred hhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 238 REIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 238 ~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
..+..+.+.+|+|+++++++..+... ..|..+.+.++
T Consensus 212 -----~~~~~~~~~~d~a~~~~~l~~~~~~~-~~g~~~~~~~g 248 (252)
T PRK06138 212 -----HPMNRFGTAEEVAQAALFLASDESSF-ATGTTLVVDGG 248 (252)
T ss_pred -----CCCCCCcCHHHHHHHHHHHcCchhcC-ccCCEEEECCC
Confidence 11122567899999999988775432 33567777655
No 116
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.64 E-value=6.7e-14 Score=117.78 Aligned_cols=220 Identities=13% Similarity=0.040 Sum_probs=131.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhc-------cCceeE
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTL-------LEDVTH 98 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~-------~~~V~~ 98 (303)
+.+|++|||||+|+||+.++++|+ +.|++|++++|+.. .....++.++++|+.+.+++.+.++. .|.|+|
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~-~~G~~v~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFV-EAGAKVIGFDQAFL--TQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVN 82 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEecchh--hhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 346899999999999999999999 68999999999862 11234688899999999998887765 466888
Q ss_pred Eeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCCcCcCCCCCC
Q 042242 99 IFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVS 172 (303)
Q Consensus 99 ~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p 172 (303)
+++.... ..+..+..+.+++|+.++..+++++.... ....+++.+++.... .+. .+
T Consensus 83 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~------------~~~------~~ 144 (252)
T PRK08220 83 AAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAH------------VPR------IG 144 (252)
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhc------------cCC------CC
Confidence 8654321 12344555689999999999999876531 122344444432111 000 01
Q ss_pred CCccchHHHHHHHHH-----Hh-----cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhh
Q 042242 173 KSNNFYYVLEDLLKE-----KL-----AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWE 242 (303)
Q Consensus 173 ~~~~~~y~~~k~~~e-----~~-----~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 242 (303)
... |+.+|...+ .. .+ +++++++|+.++++........ .... ...+.. .... ...+
T Consensus 145 ~~~---Y~~sK~a~~~~~~~la~e~~~~~-i~v~~i~pg~v~t~~~~~~~~~-~~~~-~~~~~~-~~~~-~~~~------ 210 (252)
T PRK08220 145 MAA---YGASKAALTSLAKCVGLELAPYG-VRCNVVSPGSTDTDMQRTLWVD-EDGE-QQVIAG-FPEQ-FKLG------ 210 (252)
T ss_pred Cch---hHHHHHHHHHHHHHHHHHhhHhC-eEEEEEecCcCcchhhhhhccc-hhhh-hhhhhh-HHHH-Hhhc------
Confidence 122 555554433 11 23 9999999999998532111000 0000 000000 0000 0000
Q ss_pred hhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 243 EYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 243 ~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
..+..+.+++|+|+++++++...... ..|+...+.++.
T Consensus 211 ~~~~~~~~~~dva~~~~~l~~~~~~~-~~g~~i~~~gg~ 248 (252)
T PRK08220 211 IPLGKIARPQEIANAVLFLASDLASH-ITLQDIVVDGGA 248 (252)
T ss_pred CCCcccCCHHHHHHHHHHHhcchhcC-ccCcEEEECCCe
Confidence 12234678899999999988654322 345666666653
No 117
>PLN02253 xanthoxin dehydrogenase
Probab=99.63 E-value=5.7e-14 Score=120.18 Aligned_cols=226 Identities=12% Similarity=0.037 Sum_probs=134.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c-cCCCeEEEEecCCCHHHHHHHHh-------c
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I-QSSSYCFISCDLLNPLDIKRKLT-------L 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~-~~~~~~~~~~D~~~~~~l~~~~~-------~ 92 (303)
+++|+++||||+|+||++++++|+ +.|++|++++|+..... . ...++.++++|++|.+++.++++ .
T Consensus 16 l~~k~~lItGas~gIG~~la~~l~-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~ 94 (280)
T PLN02253 16 LLGKVALVTGGATGIGESIVRLFH-KHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGT 94 (280)
T ss_pred cCCCEEEEECCCchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 356899999999999999999999 68999999998754321 1 12367899999999999888776 4
Q ss_pred cCceeEEeecccc------cCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeeccc-ccccccCCCcccccCC
Q 042242 93 LEDVTHIFWVTWA------SQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMK-HYVSLQGLPEEKQVRF 163 (303)
Q Consensus 93 ~~~V~~~~~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~-~y~~~~~~~g~~~~~~ 163 (303)
+|.++|+++.... ..+..+..+.+++|+.++.++++++.... ..-.+++.+++.. .++.+
T Consensus 95 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~----------- 163 (280)
T PLN02253 95 LDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGL----------- 163 (280)
T ss_pred CCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCC-----------
Confidence 5678888764321 12344556689999999999988876541 1112333333211 11000
Q ss_pred cCcCCCCCCCCccchHHHHHHHHH-----Hh---cCC-cceEEecCCceeecCCCCccc-hhhHHHHHHHHhhh--CCCc
Q 042242 164 YDEECPRVSKSNNFYYVLEDLLKE-----KL---AGK-VAWSVHRPGLLLGSSHRSLYN-FLGCLCVYGAVCKH--LNLP 231 (303)
Q Consensus 164 ~~e~~~~~p~~~~~~y~~~k~~~e-----~~---~~~-~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~~~~~--~~~~ 231 (303)
...+ |+.+|...+ +. ... +++.+++|+.+..+....... ..........+... ...+
T Consensus 164 --------~~~~---Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (280)
T PLN02253 164 --------GPHA---YTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNAN 232 (280)
T ss_pred --------CCcc---cHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCC
Confidence 0112 666665543 11 112 999999999997742111000 00000000000000 0001
Q ss_pred eeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHh
Q 042242 232 FVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKE 287 (303)
Q Consensus 232 ~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e 287 (303)
......+++|+|.++++++..+... ..|+.+++.++...+..+
T Consensus 233 ------------l~~~~~~~~dva~~~~~l~s~~~~~-i~G~~i~vdgG~~~~~~~ 275 (280)
T PLN02253 233 ------------LKGVELTVDDVANAVLFLASDEARY-ISGLNLMIDGGFTCTNHS 275 (280)
T ss_pred ------------CcCCCCCHHHHHHHHHhhcCccccc-ccCcEEEECCchhhccch
Confidence 0012467899999999887654321 345888898876544433
No 118
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.63 E-value=5.1e-14 Score=118.23 Aligned_cols=212 Identities=16% Similarity=0.140 Sum_probs=126.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc-c-----c--cCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT-A-----I--QSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-~-----~--~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
|+++++||||+|+||++++++|+ +.|+.|+++.++.... . . ....+.++.+|++|.+++.++++.
T Consensus 1 ~~~~~lVtG~~~~iG~~~a~~l~-~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06123 1 MRKVMIITGASRGIGAATALLAA-ERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELG 79 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence 46789999999999999999999 6898988776543221 1 1 123577889999999988887763
Q ss_pred -cCceeEEeeccccc-----CChHHHHHHHHHHHHHHHHHHHHHhhc-cCC----ccEEEEeeccc-ccccccCCCcccc
Q 042242 93 -LEDVTHIFWVTWAS-----QFASDMHKCCEQNKAMMCNALNAILPR-AKA----LKHVSLQTGMK-HYVSLQGLPEEKQ 160 (303)
Q Consensus 93 -~~~V~~~~~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~----~~~~~~~s~~~-~y~~~~~~~g~~~ 160 (303)
+|.|+|+++..... ....+..+.++.|+.++.++++++... ..+ -.+++.+++.. .|+.+
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-------- 151 (248)
T PRK06123 80 RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP-------- 151 (248)
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC--------
Confidence 45688887653221 123344467999999999988887654 111 12344443321 22110
Q ss_pred cCCcCcCCCCCCCCccchHHHHHHHHH-----H---hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCc
Q 042242 161 VRFYDEECPRVSKSNNFYYVLEDLLKE-----K---LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLP 231 (303)
Q Consensus 161 ~~~~~e~~~~~p~~~~~~y~~~k~~~e-----~---~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (303)
.. ... |+.+|...+ . .... ++++++||+.++++...... .... ...... ..|
T Consensus 152 ---------~~-~~~---Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~--~~~~--~~~~~~--~~p 212 (248)
T PRK06123 152 ---------GE-YID---YAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG--EPGR--VDRVKA--GIP 212 (248)
T ss_pred ---------CC-ccc---hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC--CHHH--HHHHHh--cCC
Confidence 00 012 555554333 1 1122 99999999999985321110 0110 011110 112
Q ss_pred eeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 232 FVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 232 ~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
+.. ..+++|+++++++++...... ..|+.|++.++
T Consensus 213 ~~~-------------~~~~~d~a~~~~~l~~~~~~~-~~g~~~~~~gg 247 (248)
T PRK06123 213 MGR-------------GGTAEEVARAILWLLSDEASY-TTGTFIDVSGG 247 (248)
T ss_pred CCC-------------CcCHHHHHHHHHHHhCccccC-ccCCEEeecCC
Confidence 111 236789999999887654321 34588998765
No 119
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.63 E-value=7.2e-14 Score=117.13 Aligned_cols=211 Identities=15% Similarity=0.146 Sum_probs=126.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------ccCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------IQSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
.+++|+||||||+||+++++.|+ +.|++|+++.|+..... ....++.++.+|+.+.+++.++++.
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLA-AQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFG 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35799999999999999999999 68999988888765311 1234677889999999988877763
Q ss_pred -cCceeEEeeccccc----CChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeeccc-ccccccCCCcccccCCc
Q 042242 93 -LEDVTHIFWVTWAS----QFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMK-HYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 93 -~~~V~~~~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~-~y~~~~~~~g~~~~~~~ 164 (303)
+|.|+|+++..... .......+.+..|+.++.++++++.... ....+++++++.. .|+..
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~------------ 150 (248)
T PRK05557 83 GVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP------------ 150 (248)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCC------------
Confidence 45688887653321 2233444578899999999999987651 2223444444321 11110
Q ss_pred CcCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
...+ |..+|...+ ..... +++++++|+.+.++..... ..... ..... ..+
T Consensus 151 -------~~~~---y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~---~~~~~--~~~~~--~~~---- 209 (248)
T PRK05557 151 -------GQAN---YAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDAL---PEDVK--EAILA--QIP---- 209 (248)
T ss_pred -------CCch---hHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccccc---ChHHH--HHHHh--cCC----
Confidence 0122 555443222 11122 8999999988765321111 01110 00000 111
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
...+.+.+|+|.++.+++..... ...|+.|++.++.
T Consensus 210 ---------~~~~~~~~~va~~~~~l~~~~~~-~~~g~~~~i~~~~ 245 (248)
T PRK05557 210 ---------LGRLGQPEEIASAVAFLASDEAA-YITGQTLHVNGGM 245 (248)
T ss_pred ---------CCCCcCHHHHHHHHHHHcCcccC-CccccEEEecCCc
Confidence 11245778899988877755221 1345899998763
No 120
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.63 E-value=4.6e-14 Score=118.45 Aligned_cols=211 Identities=15% Similarity=0.089 Sum_probs=129.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----------ccCCCeEEEEecCCCHHHHHHHHhc--
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----------IQSSSYCFISCDLLNPLDIKRKLTL-- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~~~D~~~~~~l~~~~~~-- 92 (303)
+++++++||||+|+||+++++.|+ +.|++|++++|...... .....+.++.+|+.|.++++++++.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 82 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLA-ADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGV 82 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHH-HCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 356899999999999999999999 68999999876432210 0123578899999999988887753
Q ss_pred -----cCceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHh-hc--cCCccEEEEeecccccccccCCCcccc
Q 042242 93 -----LEDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAIL-PR--AKALKHVSLQTGMKHYVSLQGLPEEKQ 160 (303)
Q Consensus 93 -----~~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~-~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~ 160 (303)
+|.|+|.++... ...+.....+.++.|+.++.++++++. .. .....+++.+++...+.+.
T Consensus 83 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------- 154 (249)
T PRK12827 83 EEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGN-------- 154 (249)
T ss_pred HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCC--------
Confidence 466888876533 222334445678999999999999987 22 1122345554443222110
Q ss_pred cCCcCcCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCc
Q 042242 161 VRFYDEECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLP 231 (303)
Q Consensus 161 ~~~~~e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (303)
.+..+ |..+|...+ ..... ++++++||+.+.++...... ... .+.+ ..+
T Consensus 155 ----------~~~~~---y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~--~~~-----~~~~--~~~ 212 (249)
T PRK12827 155 ----------RGQVN---YAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAA--PTE-----HLLN--PVP 212 (249)
T ss_pred ----------CCCch---hHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccc--hHH-----HHHh--hCC
Confidence 00122 666554322 11112 99999999999985322110 000 0000 111
Q ss_pred eeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 232 FVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 232 ~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
...+.+.+|+|+++++++...... ..|+.+++.++.
T Consensus 213 -------------~~~~~~~~~va~~~~~l~~~~~~~-~~g~~~~~~~g~ 248 (249)
T PRK12827 213 -------------VQRLGEPDEVAALVAFLVSDAASY-VTGQVIPVDGGF 248 (249)
T ss_pred -------------CcCCcCHHHHHHHHHHHcCcccCC-ccCcEEEeCCCC
Confidence 111346788899888877553222 346788887653
No 121
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.63 E-value=7.8e-14 Score=117.45 Aligned_cols=216 Identities=13% Similarity=0.019 Sum_probs=133.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhcc-------CceeE
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLL-------EDVTH 98 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-------~~V~~ 98 (303)
+++|+++||||+|+||++++++|+ ..|++|++++|++.. .....++.++++|+.+.+++.++++.+ |.|+|
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~-~~g~~v~~~~r~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 81 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFL-AAGATVVVCGRRAPE-TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVN 81 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCChhh-hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 356899999999999999999999 689999999998654 112346788999999999888877654 66888
Q ss_pred Eeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc-c--CCccEEEEeecccccccccCCCcccccCCcCcCCCCC
Q 042242 99 IFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR-A--KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRV 171 (303)
Q Consensus 99 ~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~ 171 (303)
.++.... ........+.+++|+.++..+++++... . ....+++.+++...+. +..
T Consensus 82 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~------------~~~------ 143 (252)
T PRK07856 82 NAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRR------------PSP------ 143 (252)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCC------------CCC------
Confidence 8764321 2233344568899999999999988653 1 1122444444321210 000
Q ss_pred CCCccchHHHHHHHHH-----H----hcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhh
Q 042242 172 SKSNNFYYVLEDLLKE-----K----LAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWE 242 (303)
Q Consensus 172 p~~~~~~y~~~k~~~e-----~----~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 242 (303)
...+ |+.+|...+ + ... +++..++|+.+..+....... .. .....+.. ..|
T Consensus 144 ~~~~---Y~~sK~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~--~~-~~~~~~~~--~~~----------- 203 (252)
T PRK07856 144 GTAA---YGAAKAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYG--DA-EGIAAVAA--TVP----------- 203 (252)
T ss_pred CCch---hHHHHHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhcc--CH-HHHHHHhh--cCC-----------
Confidence 0122 666555443 2 223 889999999887642111000 00 00000111 111
Q ss_pred hhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCcc
Q 042242 243 EYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFT 284 (303)
Q Consensus 243 ~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s 284 (303)
+..+.+++++|.++++++..+... ..|..+.+.++...+
T Consensus 204 --~~~~~~p~~va~~~~~L~~~~~~~-i~G~~i~vdgg~~~~ 242 (252)
T PRK07856 204 --LGRLATPADIAWACLFLASDLASY-VSGANLEVHGGGERP 242 (252)
T ss_pred --CCCCcCHHHHHHHHHHHcCcccCC-ccCCEEEECCCcchH
Confidence 112457789999998887654321 456888888776544
No 122
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.63 E-value=5.1e-14 Score=120.08 Aligned_cols=206 Identities=14% Similarity=0.033 Sum_probs=125.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
+++|+++||||+|+||++++++|+ ..|++|++++|+.+... . ...++.++.+|++|.+++.++++.
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La-~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 82 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFA-RRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLG 82 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 457899999999999999999999 68999999998865432 1 122467789999999998887765
Q ss_pred -cCceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhcc---CCccEEEEeecccccccccCCCcccccCCc
Q 042242 93 -LEDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPRA---KALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 93 -~~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~---~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
+|.++|.++... ...+.....+.+++|+.++.++++++.... ..-.+++.+++...+...
T Consensus 83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~------------ 150 (275)
T PRK05876 83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPN------------ 150 (275)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCC------------
Confidence 466888876532 222334445578999999999998876431 112345554443222110
Q ss_pred CcCCCCCCCCccchHHHHHHHH---------HHh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee
Q 042242 165 DEECPRVSKSNNFYYVLEDLLK---------EKL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~---------e~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
.+..+ |+.+|... ++. .+ +++++++|+.+.++..... .... ..... .......
T Consensus 151 ------~~~~~---Y~asK~a~~~~~~~l~~e~~~~g-i~v~~v~Pg~v~t~~~~~~----~~~~--~~~~~-~~~~~~~ 213 (275)
T PRK05876 151 ------AGLGA---YGVAKYGVVGLAETLAREVTADG-IGVSVLCPMVVETNLVANS----ERIR--GAACA-QSSTTGS 213 (275)
T ss_pred ------CCCch---HHHHHHHHHHHHHHHHHHhhhcC-cEEEEEEeCccccccccch----hhhc--Ccccc-ccccccc
Confidence 01223 77666532 121 23 9999999999887422111 0000 00000 0001111
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCc
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATND 265 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~ 265 (303)
.+.. ....+..+++|+|++++.++..+
T Consensus 214 ~~~~----~~~~~~~~~~dva~~~~~ai~~~ 240 (275)
T PRK05876 214 PGPL----PLQDDNLGVDDIAQLTADAILAN 240 (275)
T ss_pred cccc----cccccCCCHHHHHHHHHHHHHcC
Confidence 1111 12234678999999999888654
No 123
>PRK07985 oxidoreductase; Provisional
Probab=99.62 E-value=1.4e-13 Score=118.48 Aligned_cols=214 Identities=11% Similarity=0.045 Sum_probs=130.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---------ccCCCeEEEEecCCCHHHHHHHHhc----
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---------IQSSSYCFISCDLLNPLDIKRKLTL---- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---------~~~~~~~~~~~D~~~~~~l~~~~~~---- 92 (303)
+.+|+++||||+|+||++++++|+ +.|++|+++.|+..... ....++.++.+|++|.+++.++++.
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~-~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 125 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYA-REGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA 125 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHH-HCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 345899999999999999999999 68999998877543211 0123467889999999888776654
Q ss_pred ---cCceeEEeecc-----cccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCc
Q 042242 93 ---LEDVTHIFWVT-----WASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 93 ---~~~V~~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
+|.++|.++.. ....+..+..+.+++|+.++..+++++......-.+++.+|+...|...
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~------------ 193 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPS------------ 193 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCC------------
Confidence 35577776532 1122345556689999999999999987642112345555443233111
Q ss_pred CcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
+. ..+ |+.+|...+ .. .+ +++.+++|+.|.++..... ..... ......+ ..|
T Consensus 194 ----~~--~~~---Y~asKaal~~l~~~la~el~~~g-Irvn~i~PG~v~t~~~~~~-~~~~~--~~~~~~~--~~~--- 255 (294)
T PRK07985 194 ----PH--LLD---YAATKAAILNYSRGLAKQVAEKG-IRVNIVAPGPIWTALQISG-GQTQD--KIPQFGQ--QTP--- 255 (294)
T ss_pred ----CC--cch---hHHHHHHHHHHHHHHHHHHhHhC-cEEEEEECCcCcccccccc-CCCHH--HHHHHhc--cCC---
Confidence 00 123 666655433 11 24 9999999999998532111 00001 0000111 111
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+..+...+|+|.++++++...... ..|+.+.+.++.
T Consensus 256 ----------~~r~~~pedva~~~~fL~s~~~~~-itG~~i~vdgG~ 291 (294)
T PRK07985 256 ----------MKRAGQPAELAPVYVYLASQESSY-VTAEVHGVCGGE 291 (294)
T ss_pred ----------CCCCCCHHHHHHHHHhhhChhcCC-ccccEEeeCCCe
Confidence 112457789999999887654321 345788777764
No 124
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.61 E-value=4.3e-14 Score=117.02 Aligned_cols=202 Identities=15% Similarity=0.083 Sum_probs=120.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---ccCCCeEEEEecCCCHHHHHHHHhc---cCceeEEe
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---IQSSSYCFISCDLLNPLDIKRKLTL---LEDVTHIF 100 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~D~~~~~~l~~~~~~---~~~V~~~~ 100 (303)
|+|+++||||+|+||+++++.|+ +. ++|++++|++.+.. ...++++++.+|+.|.+++.++++. +|.|+|++
T Consensus 2 ~~~~vlVtG~~g~iG~~l~~~l~-~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~a 79 (227)
T PRK08219 2 ERPTALITGASRGIGAAIARELA-PT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNA 79 (227)
T ss_pred CCCEEEEecCCcHHHHHHHHHHH-hh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECC
Confidence 45799999999999999999999 56 89999999865532 1224688999999999999998875 56699987
Q ss_pred eccccc----CChHHHHHHHHHHHHHHHHHHHHHhhc-cCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCc
Q 042242 101 WVTWAS----QFASDMHKCCEQNKAMMCNALNAILPR-AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSN 175 (303)
Q Consensus 101 ~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~ 175 (303)
+..... .......+.++.|+.+...+...+.+. .....+++++++...+.+.. +..+
T Consensus 80 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~------------------~~~~ 141 (227)
T PRK08219 80 GVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANP------------------GWGS 141 (227)
T ss_pred CcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCC------------------CCch
Confidence 653321 122333346788888855544444322 11123444444432221110 0122
Q ss_pred cchHHHHHHHHH-----Hh--cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhccc
Q 042242 176 NFYYVLEDLLKE-----KL--AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLD 247 (303)
Q Consensus 176 ~~~y~~~k~~~e-----~~--~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 247 (303)
|+..|...+ +. ... +++..++|+.+.++... .. ....+.. .+ ...
T Consensus 142 ---y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~-------~~------~~~~~~~--~~---------~~~ 194 (227)
T PRK08219 142 ---YAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQR-------GL------VAQEGGE--YD---------PER 194 (227)
T ss_pred ---HHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhh-------hh------hhhhccc--cC---------CCC
Confidence 554444332 21 122 78888888766542110 10 0000100 01 113
Q ss_pred CccHHHHHHHHHHHhcCcCCcCCCCceEEeec
Q 042242 248 GSDSRLVAEQHIWVATNDDISSTKGQAFNAIN 279 (303)
Q Consensus 248 ~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~ 279 (303)
+++++|+|++++.++..+.. +.+|++.-
T Consensus 195 ~~~~~dva~~~~~~l~~~~~----~~~~~~~~ 222 (227)
T PRK08219 195 YLRPETVAKAVRFAVDAPPD----AHITEVVV 222 (227)
T ss_pred CCCHHHHHHHHHHHHcCCCC----CccceEEE
Confidence 67899999999999877532 36787764
No 125
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.61 E-value=1.4e-13 Score=115.68 Aligned_cols=156 Identities=19% Similarity=0.210 Sum_probs=103.4
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc----cCCCeEEEEecCCCHHHHHHHHh-------ccCcee
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI----QSSSYCFISCDLLNPLDIKRKLT-------LLEDVT 97 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~l~~~~~-------~~~~V~ 97 (303)
++|+||||+|+||.++++.|+ ..|++|++++|++.+... ...++.++.+|+.|.+++.++++ ++|.|+
T Consensus 1 ~~vlItGasg~iG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi 79 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFI-QQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLV 79 (248)
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 479999999999999999999 689999999998764321 12367889999999998887775 456688
Q ss_pred EEeeccc-----ccCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCCcCcCCCC
Q 042242 98 HIFWVTW-----ASQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPR 170 (303)
Q Consensus 98 ~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~ 170 (303)
|.++... ...+..+..+.+++|+.++..++..+.... ....+++.+|+...+ .+.
T Consensus 80 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~------------~~~------ 141 (248)
T PRK10538 80 NNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGS------------WPY------ 141 (248)
T ss_pred ECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccC------------CCC------
Confidence 8876432 122344445688999999877777765431 223345555442111 000
Q ss_pred CCCCccchHHHHHHHHH-----H---hcCC-cceEEecCCceeec
Q 042242 171 VSKSNNFYYVLEDLLKE-----K---LAGK-VAWSVHRPGLLLGS 206 (303)
Q Consensus 171 ~p~~~~~~y~~~k~~~e-----~---~~~~-~~~~ilRp~~v~G~ 206 (303)
.+..+ |+.+|...+ . .... +++.+++|+.+.|.
T Consensus 142 ~~~~~---Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~ 183 (248)
T PRK10538 142 AGGNV---YGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGT 183 (248)
T ss_pred CCCch---hHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeeccc
Confidence 01222 666555443 1 1122 99999999999863
No 126
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.61 E-value=3e-13 Score=116.27 Aligned_cols=215 Identities=15% Similarity=0.092 Sum_probs=132.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc------cc--CCCeEEEEecCCCHHHHHHHHhc----
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA------IQ--SSSYCFISCDLLNPLDIKRKLTL---- 92 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~------~~--~~~~~~~~~D~~~~~~l~~~~~~---- 92 (303)
.+++|++|||||+|+||++++++|+ +.|++|++++|+..... .. ..++.++.+|+.+.+.+.++++.
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~-~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~ 121 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFA-KEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE 121 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3346899999999999999999999 68999999998754311 11 23577889999999988777754
Q ss_pred ---cCceeEEeecccc-----cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCc
Q 042242 93 ---LEDVTHIFWVTWA-----SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 93 ---~~~V~~~~~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
.|.|+|+++.... ..+.....+.++.|+.++.++++++...-..-.+++.+++...|....
T Consensus 122 ~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~----------- 190 (290)
T PRK06701 122 LGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNE----------- 190 (290)
T ss_pred cCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCC-----------
Confidence 4668888764321 223344456899999999999999876411112444444433331110
Q ss_pred CcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
. ... |..+|...+ +. .+ ++++.++|+.++.+..... ..... ...... .
T Consensus 191 -----~--~~~---Y~~sK~a~~~l~~~la~~~~~~g-Irv~~i~pG~v~T~~~~~~--~~~~~--~~~~~~--~----- 248 (290)
T PRK06701 191 -----T--LID---YSATKGAIHAFTRSLAQSLVQKG-IRVNAVAPGPIWTPLIPSD--FDEEK--VSQFGS--N----- 248 (290)
T ss_pred -----C--cch---hHHHHHHHHHHHHHHHHHhhhcC-eEEEEEecCCCCCcccccc--cCHHH--HHHHHh--c-----
Confidence 0 112 555544332 11 23 9999999999987422111 00010 000000 1
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
.....+.+++|+|.++++++...... ..|..+++.++..
T Consensus 249 --------~~~~~~~~~~dva~~~~~ll~~~~~~-~~G~~i~idgg~~ 287 (290)
T PRK06701 249 --------TPMQRPGQPEELAPAYVFLASPDSSY-ITGQMLHVNGGVI 287 (290)
T ss_pred --------CCcCCCcCHHHHHHHHHHHcCcccCC-ccCcEEEeCCCcc
Confidence 11122567789999999988765321 3458888887643
No 127
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=99.60 E-value=8.3e-14 Score=106.43 Aligned_cols=203 Identities=13% Similarity=0.111 Sum_probs=129.0
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEeecccccCC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWASQF 108 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~~~~ 108 (303)
+||.|+||||.+|++|++..+ .+||+|++++|++++... .+++.+++.|+.|++++.+.+.+.|.||...+.......
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~-~RGHeVTAivRn~~K~~~-~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~~ 78 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEAL-KRGHEVTAIVRNASKLAA-RQGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASDND 78 (211)
T ss_pred CeEEEEecCchhHHHHHHHHH-hCCCeeEEEEeChHhccc-cccceeecccccChhhhHhhhcCCceEEEeccCCCCChh
Confidence 589999999999999999999 799999999999987543 278889999999999999999999987777554322211
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecc-cccccccCCCcccccCCcCcCCCCCCCCccchHHHHHH---
Q 042242 109 ASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGM-KHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDL--- 184 (303)
Q Consensus 109 ~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~-~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~--- 184 (303)
.........+++.++..+ ..++....|. .-|..+ ...-.|. |..|.-||...+.
T Consensus 79 --------~~~~k~~~~li~~l~~ag--v~RllVVGGAGSL~id~---------g~rLvD~---p~fP~ey~~~A~~~ae 136 (211)
T COG2910 79 --------ELHSKSIEALIEALKGAG--VPRLLVVGGAGSLEIDE---------GTRLVDT---PDFPAEYKPEALAQAE 136 (211)
T ss_pred --------HHHHHHHHHHHHHHhhcC--CeeEEEEcCccceEEcC---------CceeecC---CCCchhHHHHHHHHHH
Confidence 122233556777777642 2233333332 122111 1111222 2344334444322
Q ss_pred -HHHHhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHh
Q 042242 185 -LKEKLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVA 262 (303)
Q Consensus 185 -~~e~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~ 262 (303)
+..+..+. ++||.+-|+..+-|+.+.+ ++ +-.+..+...-.++ +.++..|.|.+++..+
T Consensus 137 ~L~~Lr~~~~l~WTfvSPaa~f~PGerTg-~y-----------rlggD~ll~n~~G~-------SrIS~aDYAiA~lDe~ 197 (211)
T COG2910 137 FLDSLRAEKSLDWTFVSPAAFFEPGERTG-NY-----------RLGGDQLLVNAKGE-------SRISYADYAIAVLDEL 197 (211)
T ss_pred HHHHHhhccCcceEEeCcHHhcCCccccC-ce-----------EeccceEEEcCCCc-------eeeeHHHHHHHHHHHH
Confidence 22233333 9999999999999866533 11 00122333332222 2567788899999999
Q ss_pred cCcCCcCCCCceEEe
Q 042242 263 TNDDISSTKGQAFNA 277 (303)
Q Consensus 263 ~~~~~~~~~g~~yni 277 (303)
+.+...+ +.|-+
T Consensus 198 E~~~h~r---qRftv 209 (211)
T COG2910 198 EKPQHIR---QRFTV 209 (211)
T ss_pred hcccccc---eeeee
Confidence 9998766 77755
No 128
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.60 E-value=1.5e-13 Score=115.42 Aligned_cols=157 Identities=18% Similarity=0.073 Sum_probs=103.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHh-------ccCc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLT-------LLED 95 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~-------~~~~ 95 (303)
++|+|+||||+|+||++++++|+ +.|++|++++|+..... ....++.++++|+.|.+++..+++ .+|.
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~-~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFL-AEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA 83 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 46899999999999999999999 68999999999764322 112357788999999887665554 3466
Q ss_pred eeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeec-ccccccccCCCcccccCCcCcCCCC
Q 042242 96 VTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTG-MKHYVSLQGLPEEKQVRFYDEECPR 170 (303)
Q Consensus 96 V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~-~~~y~~~~~~~g~~~~~~~~e~~~~ 170 (303)
|+|+++.... ..+.....+.++.|+.++.++++++........+++..++ ...|+.+
T Consensus 84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~------------------ 145 (249)
T PRK06500 84 VFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMP------------------ 145 (249)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCC------------------
Confidence 8888765322 2233445568999999999999999864111122333322 1122100
Q ss_pred CCCCccchHHHHHHHHH-----Hh---cCC-cceEEecCCceeec
Q 042242 171 VSKSNNFYYVLEDLLKE-----KL---AGK-VAWSVHRPGLLLGS 206 (303)
Q Consensus 171 ~p~~~~~~y~~~k~~~e-----~~---~~~-~~~~ilRp~~v~G~ 206 (303)
...+ |+.+|...+ +. ... +++.++||+.++++
T Consensus 146 -~~~~---Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~ 186 (249)
T PRK06500 146 -NSSV---YAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTP 186 (249)
T ss_pred -CccH---HHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCH
Confidence 0223 666655443 11 112 99999999999985
No 129
>PRK06194 hypothetical protein; Provisional
Probab=99.60 E-value=1.4e-13 Score=118.16 Aligned_cols=105 Identities=15% Similarity=0.060 Sum_probs=80.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----cc--CCCeEEEEecCCCHHHHHHHHhc-------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----IQ--SSSYCFISCDLLNPLDIKRKLTL------- 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~--~~~~~~~~~D~~~~~~l~~~~~~------- 92 (303)
.+++||||||+|+||++++++|+ +.|++|++++|+..... .. ..++.++.+|++|.++++++++.
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGA-ALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA 83 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHH-HCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 45899999999999999999999 68999999999754321 11 23577799999999999888775
Q ss_pred cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhh
Q 042242 93 LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILP 132 (303)
Q Consensus 93 ~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~ 132 (303)
+|.|+|+++.... ..+..+....+++|+.++.++++++..
T Consensus 84 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 127 (287)
T PRK06194 84 VHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTP 127 (287)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHH
Confidence 4679999776432 223344556789999999998777543
No 130
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.60 E-value=1.5e-13 Score=116.20 Aligned_cols=224 Identities=13% Similarity=0.085 Sum_probs=134.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc------ccCCCeEEEEecCCCHHHHHHHHhc-------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA------IQSSSYCFISCDLLNPLDIKRKLTL------- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~D~~~~~~l~~~~~~------- 92 (303)
+++++++||||+|.||++++++|+ +.|++|++++|+++... ....++.++.+|+++.+++.++++.
T Consensus 5 l~~~~ilItGasggiG~~la~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLA-EEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGR 83 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHH-HcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 456899999999999999999999 68999999999876431 1134678899999999988887764
Q ss_pred cCceeEEeecccc---cCChHHHHHHHHHHHHHHHHHHHHHhhc-cCCccEEEEeecccccccccCCCcccccCCcCcCC
Q 042242 93 LEDVTHIFWVTWA---SQFASDMHKCCEQNKAMMCNALNAILPR-AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC 168 (303)
Q Consensus 93 ~~~V~~~~~~~~~---~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~ 168 (303)
+|.|+|+++.... .....+..+.++.|+.++..+.+.+... .....++++.++...+.+.
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~---------------- 147 (258)
T PRK08628 84 IDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQ---------------- 147 (258)
T ss_pred CCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCC----------------
Confidence 4668888764211 1122344457899999999988887653 1112345555442221000
Q ss_pred CCCCCCccchHHHHHHHHH-----Hh---cCC-cceEEecCCceeecCCCCccc-hhhHHHHHHHHhhhCCCceeeCCch
Q 042242 169 PRVSKSNNFYYVLEDLLKE-----KL---AGK-VAWSVHRPGLLLGSSHRSLYN-FLGCLCVYGAVCKHLNLPFVFGGTR 238 (303)
Q Consensus 169 ~~~p~~~~~~y~~~k~~~e-----~~---~~~-~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~ 238 (303)
.+... |+.+|...+ .. ... ++++.++|+.++++....... ..........+.+ ..+ ..
T Consensus 148 --~~~~~---Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~--~~--- 215 (258)
T PRK08628 148 --GGTSG---YAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITA--KIP--LG--- 215 (258)
T ss_pred --CCCch---hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHh--cCC--cc---
Confidence 00122 666655443 11 122 999999999999852111000 0000000000000 001 00
Q ss_pred hhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHh
Q 042242 239 EIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKE 287 (303)
Q Consensus 239 ~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e 287 (303)
..+.+++|+|.++++++...... ..|+.|.+.++ ...+++
T Consensus 216 -------~~~~~~~dva~~~~~l~~~~~~~-~~g~~~~~~gg-~~~~~~ 255 (258)
T PRK08628 216 -------HRMTTAEEIADTAVFLLSERSSH-TTGQWLFVDGG-YVHLDR 255 (258)
T ss_pred -------ccCCCHHHHHHHHHHHhChhhcc-ccCceEEecCC-cccccc
Confidence 12568899999999988765322 33577777655 334443
No 131
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.60 E-value=2.3e-13 Score=114.71 Aligned_cols=213 Identities=13% Similarity=0.110 Sum_probs=132.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHhc-------cCc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLTL-------LED 95 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~~-------~~~ 95 (303)
.+++|+||||+|+||++++++|+ +.|++|++++|++.... .....+.++.+|+.+.+++.++++. .|.
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~-~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFA-AKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 46899999999999999999999 68999999999765321 1123566889999999988877764 466
Q ss_pred eeEEeeccccc----CChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCC
Q 042242 96 VTHIFWVTWAS----QFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECP 169 (303)
Q Consensus 96 V~~~~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~ 169 (303)
++|+++..... ....+..+.+++|+.++.++++++... .....+++.+++...+.+ ...
T Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~------------~~~--- 157 (255)
T PRK06841 93 LVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVA------------LER--- 157 (255)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccC------------CCC---
Confidence 88887653221 223344457899999999999998754 112334554443211100 000
Q ss_pred CCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchh
Q 042242 170 RVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTRE 239 (303)
Q Consensus 170 ~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 239 (303)
..+ |+.+|...+ +. .+ +++..++|+.+..+....... ... . ..... ..|
T Consensus 158 ---~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~pg~v~t~~~~~~~~--~~~-~-~~~~~--~~~-------- 216 (255)
T PRK06841 158 ---HVA---YCASKAGVVGMTKVLALEWGPYG-ITVNAISPTVVLTELGKKAWA--GEK-G-ERAKK--LIP-------- 216 (255)
T ss_pred ---Cch---HHHHHHHHHHHHHHHHHHHHhhC-eEEEEEEeCcCcCcccccccc--hhH-H-HHHHh--cCC--------
Confidence 112 666555432 12 23 999999999888742211100 000 0 00110 111
Q ss_pred hhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 240 IWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 240 ~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
...+.+++|+|+++++++..+... ..|+.+.+.++..
T Consensus 217 -----~~~~~~~~~va~~~~~l~~~~~~~-~~G~~i~~dgg~~ 253 (255)
T PRK06841 217 -----AGRFAYPEEIAAAALFLASDAAAM-ITGENLVIDGGYT 253 (255)
T ss_pred -----CCCCcCHHHHHHHHHHHcCccccC-ccCCEEEECCCcc
Confidence 112568899999999988665332 3468888877653
No 132
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.60 E-value=1.9e-13 Score=114.83 Aligned_cols=213 Identities=15% Similarity=0.061 Sum_probs=131.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHhc-------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLTL------- 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~------- 92 (303)
.+++++||||+|+||++++++|+ +.|++|++++|++.+.. . ...++.++.+|+.|.++++++++.
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALA-EAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG 84 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 35899999999999999999999 68999999998865422 1 123578899999999988877753
Q ss_pred cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc-C-CccEEEEeecccccccccCCCcccccCCcCc
Q 042242 93 LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA-K-ALKHVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 93 ~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~-~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
+|.|+|+++.... ..+.....+.++.|+.++.++++++.... . +-.+++++++...+.+. .
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~- 151 (250)
T PRK12939 85 LDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGA------------P- 151 (250)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCC------------C-
Confidence 5668888765322 22233444578899999999999887541 1 12245554442222110 0
Q ss_pred CCCCCCCCccchHHHHHHHHH-----Hh---cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCc
Q 042242 167 ECPRVSKSNNFYYVLEDLLKE-----KL---AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGT 237 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~e-----~~---~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 237 (303)
.... |..+|...+ .. ... ++++.++|+.+..+....... ..+ ...... .
T Consensus 152 -----~~~~---y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~--~~~--~~~~~~--~-------- 209 (250)
T PRK12939 152 -----KLGA---YVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA--DER--HAYYLK--G-------- 209 (250)
T ss_pred -----Ccch---HHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC--hHH--HHHHHh--c--------
Confidence 0112 555444333 11 112 899999999887643221100 000 000100 1
Q ss_pred hhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 238 REIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 238 ~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
.....+.+++|+|.+++.++..+... ..|+.+.+.++.
T Consensus 210 -----~~~~~~~~~~dva~~~~~l~~~~~~~-~~G~~i~~~gg~ 247 (250)
T PRK12939 210 -----RALERLQVPDDVAGAVLFLLSDAARF-VTGQLLPVNGGF 247 (250)
T ss_pred -----CCCCCCCCHHHHHHHHHHHhCccccC-ccCcEEEECCCc
Confidence 11122567899999999988764321 345888888764
No 133
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.60 E-value=9e-14 Score=116.54 Aligned_cols=212 Identities=12% Similarity=0.062 Sum_probs=130.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEE-ecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHh------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGI-ARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLT------ 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~------ 91 (303)
+|+++++||||+|+||++++++|+ +.|++|+++ +|++.... ....++.++.+|++|.+++.++++
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~-~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLA-KEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF 81 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 466899999999999999999998 689999988 88754421 012357889999999998877776
Q ss_pred -ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCc
Q 042242 92 -LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 92 -~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
.+|.|+|.++.... ..+.....+.+++|+.++.++++.+... ..+..+++.+++...+.+. +
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~----------~- 150 (247)
T PRK05565 82 GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGA----------S- 150 (247)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCC----------C-
Confidence 46678888665321 1223344557899999998888887754 1122344444432222110 0
Q ss_pred CcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
. ..+ |+.+|...+ .. .+ ++++.+||+.+..+...... ... ...+.. .
T Consensus 151 -----~--~~~---y~~sK~a~~~~~~~~~~~~~~~g-i~~~~v~pg~v~t~~~~~~~---~~~--~~~~~~------~- 207 (247)
T PRK05565 151 -----C--EVL---YSASKGAVNAFTKALAKELAPSG-IRVNAVAPGAIDTEMWSSFS---EED--KEGLAE------E- 207 (247)
T ss_pred -----C--ccH---HHHHHHHHHHHHHHHHHHHHHcC-eEEEEEEECCccCccccccC---hHH--HHHHHh------c-
Confidence 0 112 555443222 11 23 99999999998763222110 110 000100 0
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
.....+...++++..+++++...... ..|+.+++.++.
T Consensus 208 --------~~~~~~~~~~~va~~~~~l~~~~~~~-~~g~~~~~~~~~ 245 (247)
T PRK05565 208 --------IPLGRLGKPEEIAKVVLFLASDDASY-ITGQIITVDGGW 245 (247)
T ss_pred --------CCCCCCCCHHHHHHHHHHHcCCccCC-ccCcEEEecCCc
Confidence 01112457789999998888665432 456888887764
No 134
>PRK06398 aldose dehydrogenase; Validated
Probab=99.59 E-value=2.9e-13 Score=114.41 Aligned_cols=217 Identities=10% Similarity=0.024 Sum_probs=129.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhc-------cCceeE
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTL-------LEDVTH 98 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~-------~~~V~~ 98 (303)
+++|++|||||+|+||++++++|+ +.|++|++++|+.... ..+.++++|+.|++++.++++. +|.++|
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~-~~G~~Vi~~~r~~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~ 78 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLK-EEGSNVINFDIKEPSY----NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVN 78 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-HCCCeEEEEeCCcccc----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 356899999999999999999999 6899999999986542 3678899999999988777763 456888
Q ss_pred Eeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCCcCcCCCCCC
Q 042242 99 IFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVS 172 (303)
Q Consensus 99 ~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p 172 (303)
.++... ......+..+.+++|+.++..+++++.+.. ....+++.+++...+... .+
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------------~~ 140 (258)
T PRK06398 79 NAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVT------------------RN 140 (258)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCC------------------CC
Confidence 765432 122334445678999999999988876541 222345554442222100 00
Q ss_pred CCccchHHHHHHHHH---------HhcCCcceEEecCCceeecCCCCccchh--hHHHHHHHHhhhCCCceeeCCchhhh
Q 042242 173 KSNNFYYVLEDLLKE---------KLAGKVAWSVHRPGLLLGSSHRSLYNFL--GCLCVYGAVCKHLNLPFVFGGTREIW 241 (303)
Q Consensus 173 ~~~~~~y~~~k~~~e---------~~~~~~~~~ilRp~~v~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~ 241 (303)
... |+.+|...+ +... +++..++|+.+-.+-........ .....+......... .
T Consensus 141 ~~~---Y~~sKaal~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------- 206 (258)
T PRK06398 141 AAA---YVTSKHAVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGE--M-------- 206 (258)
T ss_pred Cch---hhhhHHHHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhh--c--------
Confidence 222 555554433 2223 88999999988653111000000 000000000000000 0
Q ss_pred hhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 242 EEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 242 ~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
..+..+.+++++|.++++++...... ..|+.+.+.++.
T Consensus 207 -~~~~~~~~p~eva~~~~~l~s~~~~~-~~G~~i~~dgg~ 244 (258)
T PRK06398 207 -HPMKRVGKPEEVAYVVAFLASDLASF-ITGECVTVDGGL 244 (258)
T ss_pred -CCcCCCcCHHHHHHHHHHHcCcccCC-CCCcEEEECCcc
Confidence 11122567899999999887644321 345778777765
No 135
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.59 E-value=1.8e-13 Score=110.27 Aligned_cols=195 Identities=19% Similarity=0.202 Sum_probs=127.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc---cC--CCeEEEEecCCCHHHHHHHHh-------ccC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI---QS--SSYCFISCDLLNPLDIKRKLT-------LLE 94 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~---~~--~~~~~~~~D~~~~~~l~~~~~-------~~~ 94 (303)
.+|.|+|||||..||.++++.|. ..|++|++..|+.+.... +. ..+..+..|++|.+++..+++ .+|
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~-~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD 83 (246)
T COG4221 5 KGKVALITGASSGIGEATARALA-EAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRID 83 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHH-HCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence 35789999999999999999999 799999999999876431 11 357888999999988555443 345
Q ss_pred ceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc-----cCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 95 DVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR-----AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 95 ~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~-----~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
.++|-|+.... .....++..++++|+.|+.+...+.... ...++.+++++|...|.+.
T Consensus 84 iLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~------------- 150 (246)
T COG4221 84 ILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGG------------- 150 (246)
T ss_pred EEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCC-------------
Confidence 45555544322 2234556679999999999998887765 2345555555554454211
Q ss_pred cCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGG 236 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 236 (303)
.- |..+|.... ...+. ++++.+-|+.+-..--. . +.+.|
T Consensus 151 --------~v---Y~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s-~--------------------v~~~g 198 (246)
T COG4221 151 --------AV---YGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFS-T--------------------VRFEG 198 (246)
T ss_pred --------cc---chhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecc-c--------------------ccCCc
Confidence 11 555544333 33344 99999999988552110 1 11111
Q ss_pred chhhhhh--hcccCccHHHHHHHHHHHhcCcCC
Q 042242 237 TREIWEE--YCLDGSDSRLVAEQHIWVATNDDI 267 (303)
Q Consensus 237 ~~~~~~~--~~~~~~~~~d~a~a~~~~~~~~~~ 267 (303)
+...... ......+++|+|+++++++..|..
T Consensus 199 ~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P~~ 231 (246)
T COG4221 199 DDERADKVYKGGTALTPEDIAEAVLFAATQPQH 231 (246)
T ss_pred hhhhHHHHhccCCCCCHHHHHHHHHHHHhCCCc
Confidence 1111101 123467889999999999998864
No 136
>PRK08324 short chain dehydrogenase; Validated
Probab=99.59 E-value=7.3e-14 Score=133.27 Aligned_cols=228 Identities=14% Similarity=0.053 Sum_probs=136.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc----cC--CCeEEEEecCCCHHHHHHHHh-------
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI----QS--SSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~----~~--~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
..++++|+||||+|+||+.++++|+ ..|++|++++|++..... .. .++.++.+|++|.+++.++++
T Consensus 419 ~l~gk~vLVTGasggIG~~la~~L~-~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g 497 (681)
T PRK08324 419 PLAGKVALVTGAAGGIGKATAKRLA-AEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFG 497 (681)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHH-HCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4457899999999999999999999 689999999998755321 11 367889999999998887776
Q ss_pred ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhccC--Cc-cEEEEeecccccccccCCCcccccCCc
Q 042242 92 LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRAK--AL-KHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 92 ~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~--~~-~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
++|.|+|+++.... ..+.......+++|+.++..+++++..... .. .+++++++...+...
T Consensus 498 ~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~------------ 565 (681)
T PRK08324 498 GVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG------------ 565 (681)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC------------
Confidence 35668888764322 223344455889999999999887765411 11 344444432121000
Q ss_pred CcCCCCCCCCccchHHHHHHHHH-----Hh---cCC-cceEEecCCcee-ecCCCCccchhhHHHHHHHHhhhCCCcee-
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE-----KL---AGK-VAWSVHRPGLLL-GSSHRSLYNFLGCLCVYGAVCKHLNLPFV- 233 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e-----~~---~~~-~~~~ilRp~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 233 (303)
....+ |+.+|...+ +. ... +++.+++|+.+| +.+.... .+........ +.+..
T Consensus 566 ------~~~~~---Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~-----~~~~~~~~~~--g~~~~~ 629 (681)
T PRK08324 566 ------PNFGA---YGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTG-----EWIEARAAAY--GLSEEE 629 (681)
T ss_pred ------CCcHH---HHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccc-----hhhhhhhhhc--cCChHH
Confidence 00223 777665544 11 122 999999999998 5321111 0000000000 11100
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF 283 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~ 283 (303)
........ ..+..+++++|+|.++++++...... ..|.+|++.++...
T Consensus 630 ~~~~~~~~-~~l~~~v~~~DvA~a~~~l~s~~~~~-~tG~~i~vdgG~~~ 677 (681)
T PRK08324 630 LEEFYRAR-NLLKREVTPEDVAEAVVFLASGLLSK-TTGAIITVDGGNAA 677 (681)
T ss_pred HHHHHHhc-CCcCCccCHHHHHHHHHHHhCccccC-CcCCEEEECCCchh
Confidence 00000000 23345788999999999987422111 34589999988643
No 137
>PRK12743 oxidoreductase; Provisional
Probab=99.59 E-value=3.4e-13 Score=113.82 Aligned_cols=212 Identities=13% Similarity=0.030 Sum_probs=128.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------ccCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------IQSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
|+++|+||||+|+||++++++|+ +.|++|+++.|+..... .....+.++.+|+++.++++++++.
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLA-QQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLG 79 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999 68999988876543211 1123578899999999988776654
Q ss_pred -cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc-C--CccEEEEeecccccccccCCCcccccCCc
Q 042242 93 -LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA-K--ALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 93 -~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~--~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
.|.++|+++.... .....+..+.+++|+.++..+++++.... . +-.+++.+++... ..
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~------------~~-- 145 (256)
T PRK12743 80 RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHE------------HT-- 145 (256)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccc------------cC--
Confidence 4568887654221 22334455688999999999999877641 1 1123444433111 00
Q ss_pred CcCCCCCCCCccchHHHHHHHHH-----Hh-----cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE-----KL-----AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e-----~~-----~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
+..+... |+.+|...+ .. .+ ++++.++|+.+.++...... .... .... ...+
T Consensus 146 ----~~~~~~~---Y~~sK~a~~~l~~~la~~~~~~~-i~v~~v~Pg~~~t~~~~~~~---~~~~--~~~~--~~~~--- 207 (256)
T PRK12743 146 ----PLPGASA---YTAAKHALGGLTKAMALELVEHG-ILVNAVAPGAIATPMNGMDD---SDVK--PDSR--PGIP--- 207 (256)
T ss_pred ----CCCCcch---hHHHHHHHHHHHHHHHHHhhhhC-eEEEEEEeCCccCccccccC---hHHH--HHHH--hcCC---
Confidence 1111122 565554432 11 23 99999999999985322110 0100 0000 0111
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
...+.+++|+|.++++++...... ..|..+.+.++..
T Consensus 208 ----------~~~~~~~~dva~~~~~l~~~~~~~-~~G~~~~~dgg~~ 244 (256)
T PRK12743 208 ----------LGRPGDTHEIASLVAWLCSEGASY-TTGQSLIVDGGFM 244 (256)
T ss_pred ----------CCCCCCHHHHHHHHHHHhCccccC-cCCcEEEECCCcc
Confidence 111457789999988887554322 3457888877754
No 138
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.59 E-value=4.1e-13 Score=112.43 Aligned_cols=212 Identities=11% Similarity=0.122 Sum_probs=128.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------ccCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------IQSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
|.|+++||||+|+||+++++.|. ..|++|++++|+..... ....++.++.+|+.|.+++.++++.
T Consensus 1 ~~k~vlItG~s~~iG~~la~~l~-~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 79 (245)
T PRK12824 1 MKKIALVTGAKRGIGSAIARELL-NDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEG 79 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-HcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 45799999999999999999999 57899999999853210 1123588899999999988877764
Q ss_pred -cCceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 93 -LEDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 93 -~~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
.|.++|.++... .........+.++.|+.++.++..++.+. .....+++.+++...+.+.
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~------------- 146 (245)
T PRK12824 80 PVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQ------------- 146 (245)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCC-------------
Confidence 456888865432 22234455568899999988886665432 1123355555442222110
Q ss_pred cCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
+. ... |..+|...+ .. .+ +++++++|+.+.++...... ... ...... ..+
T Consensus 147 ---~~--~~~---Y~~sK~a~~~~~~~l~~~~~~~~-i~v~~v~pg~~~t~~~~~~~---~~~--~~~~~~--~~~---- 206 (245)
T PRK12824 147 ---FG--QTN---YSAAKAGMIGFTKALASEGARYG-ITVNCIAPGYIATPMVEQMG---PEV--LQSIVN--QIP---- 206 (245)
T ss_pred ---CC--ChH---HHHHHHHHHHHHHHHHHHHHHhC-eEEEEEEEcccCCcchhhcC---HHH--HHHHHh--cCC----
Confidence 00 112 666654222 11 23 89999999999874322110 110 001111 111
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
+....+++++++++..++..... ...|+.+++.++..
T Consensus 207 ---------~~~~~~~~~va~~~~~l~~~~~~-~~~G~~~~~~~g~~ 243 (245)
T PRK12824 207 ---------MKRLGTPEEIAAAVAFLVSEAAG-FITGETISINGGLY 243 (245)
T ss_pred ---------CCCCCCHHHHHHHHHHHcCcccc-CccCcEEEECCCee
Confidence 11244678889888877754322 14568999988754
No 139
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.58 E-value=4e-13 Score=112.84 Aligned_cols=214 Identities=14% Similarity=0.104 Sum_probs=128.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----ccCCCeEEEEecCCCHHHHHHHHhc-------c
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----IQSSSYCFISCDLLNPLDIKRKLTL-------L 93 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~D~~~~~~l~~~~~~-------~ 93 (303)
+++|+|+||||+|+||++++++|+ +.|++|++++|+..... ....++.++.+|+++.+++.++++. .
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~-~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLA-EAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 457899999999999999999999 68999999999753211 1123578899999999988776653 4
Q ss_pred CceeEEeeccccc----CChHHHHHHHHHHHHHHHHHHHHHhhc--cCC-ccEEEEeecccccccccCCCcccccCCcCc
Q 042242 94 EDVTHIFWVTWAS----QFASDMHKCCEQNKAMMCNALNAILPR--AKA-LKHVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 94 ~~V~~~~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~-~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
|.++|+++..... .......+.++.|+.++..+++++... ... ..+++.+++...|...
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-------------- 147 (248)
T TIGR01832 82 DILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG-------------- 147 (248)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC--------------
Confidence 5588886543221 123344457899999999999988654 111 2345554443333111
Q ss_pred CCCCCCCCccchHHHHHHHHH-----H---hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCc
Q 042242 167 ECPRVSKSNNFYYVLEDLLKE-----K---LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGT 237 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~e-----~---~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 237 (303)
+. ... |..+|...+ . .... +++++++|+.+..+....... .... .....+ ..|
T Consensus 148 --~~--~~~---Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~--~~~~~~--~~~------ 209 (248)
T TIGR01832 148 --IR--VPS---YTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRA-DEDR--NAAILE--RIP------ 209 (248)
T ss_pred --CC--Cch---hHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhcccc-ChHH--HHHHHh--cCC------
Confidence 00 112 555554333 1 1122 999999999998742211100 0000 000100 111
Q ss_pred hhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 238 REIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 238 ~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
...+.+++|+|+++++++...... ..|..+.+.++
T Consensus 210 -------~~~~~~~~dva~~~~~l~s~~~~~-~~G~~i~~dgg 244 (248)
T TIGR01832 210 -------AGRWGTPDDIGGPAVFLASSASDY-VNGYTLAVDGG 244 (248)
T ss_pred -------CCCCcCHHHHHHHHHHHcCccccC-cCCcEEEeCCC
Confidence 112667899999999988654322 23466655554
No 140
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.58 E-value=2.3e-13 Score=113.41 Aligned_cols=204 Identities=14% Similarity=0.118 Sum_probs=127.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c-cCCCeEEEEecCCCHHHHHHHHh-------cc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I-QSSSYCFISCDLLNPLDIKRKLT-------LL 93 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~-~~~~~~~~~~D~~~~~~l~~~~~-------~~ 93 (303)
++++|+||||+|+||++++++|+ ..|++|++++|++.+.. . ...+++++++|+.+.+++.+.++ .+
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~-~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALL-AEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL 83 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHH-HCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 45899999999999999999999 57999999999875432 1 11468889999999998888776 45
Q ss_pred CceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc-CCccEEEEeecccccccccCCCcccccCCcCcCC
Q 042242 94 EDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA-KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC 168 (303)
Q Consensus 94 ~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~ 168 (303)
|.|+|+++.... ........+.++.|+.++..+++++.+.. ....+++++++...+. +.
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~------------~~---- 147 (237)
T PRK07326 84 DVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTN------------FF---- 147 (237)
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhcc------------CC----
Confidence 668888654322 12333444678999999999988876542 2223455544321110 00
Q ss_pred CCCCCCccchHHHHHHHHH-----H---hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchh
Q 042242 169 PRVSKSNNFYYVLEDLLKE-----K---LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTRE 239 (303)
Q Consensus 169 ~~~p~~~~~~y~~~k~~~e-----~---~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 239 (303)
..... |..+|...+ . .... ++++++||+.+.++..... + ....
T Consensus 148 --~~~~~---y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~-------------------~----~~~~ 199 (237)
T PRK07326 148 --AGGAA---YNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHT-------------------P----SEKD 199 (237)
T ss_pred --CCCch---HHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccc-------------------c----chhh
Confidence 00122 555543222 1 1122 9999999998876321100 0 0000
Q ss_pred hhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc
Q 042242 240 IWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF 283 (303)
Q Consensus 240 ~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~ 283 (303)
.+ .++.+|++..++.++..+...- +....+..+.+.
T Consensus 200 ~~------~~~~~d~a~~~~~~l~~~~~~~--~~~~~~~~~~~~ 235 (237)
T PRK07326 200 AW------KIQPEDIAQLVLDLLKMPPRTL--PSKIEVRPSRPP 235 (237)
T ss_pred hc------cCCHHHHHHHHHHHHhCCcccc--ccceEEecCCCC
Confidence 11 3678999999999887765421 245556655543
No 141
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.58 E-value=4.7e-13 Score=111.47 Aligned_cols=211 Identities=14% Similarity=0.145 Sum_probs=127.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCH-HHHHHHHhccCceeEEeecc-
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNP-LDIKRKLTLLEDVTHIFWVT- 103 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~-~~l~~~~~~~~~V~~~~~~~- 103 (303)
.++|+++||||+|+||+++++.|+ +.|++|++++|++... ...++.++.+|+.+. +.+.+.+..+|.++|.++..
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~-~~G~~v~~~~r~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~~ 79 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFL-AQGAQVYGVDKQDKPD--LSGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGILD 79 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHH-HCCCEEEEEeCCcccc--cCCcEEEEECChHHHHHHHHHhhCCCCEEEECCCCCC
Confidence 356899999999999999999999 6899999999986542 234678889999987 44444445567788886532
Q ss_pred ----cccCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccc
Q 042242 104 ----WASQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNF 177 (303)
Q Consensus 104 ----~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~ 177 (303)
.......+..+.+++|+.++.++++++.... .+..+++++++...+.+. +. ...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------------~~--~~~-- 139 (235)
T PRK06550 80 DYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAG----------------GG--GAA-- 139 (235)
T ss_pred CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC----------------CC--Ccc--
Confidence 1222344455689999999999999887541 122345554442222110 00 112
Q ss_pred hHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhccc
Q 042242 178 YYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLD 247 (303)
Q Consensus 178 ~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 247 (303)
|+.+|...+ +. .+ +++++++|+.+.++.....+. .. .......+ ..| ...
T Consensus 140 -Y~~sK~a~~~~~~~la~~~~~~g-i~v~~v~pg~v~t~~~~~~~~--~~-~~~~~~~~--~~~-------------~~~ 199 (235)
T PRK06550 140 -YTASKHALAGFTKQLALDYAKDG-IQVFGIAPGAVKTPMTAADFE--PG-GLADWVAR--ETP-------------IKR 199 (235)
T ss_pred -cHHHHHHHHHHHHHHHHHhhhcC-eEEEEEeeCCccCcccccccC--ch-HHHHHHhc--cCC-------------cCC
Confidence 444443322 21 23 999999999998753221110 01 00000111 111 112
Q ss_pred CccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 248 GSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 248 ~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
+...+++|.++++++...... ..|..+.+.++
T Consensus 200 ~~~~~~~a~~~~~l~s~~~~~-~~g~~~~~~gg 231 (235)
T PRK06550 200 WAEPEEVAELTLFLASGKADY-MQGTIVPIDGG 231 (235)
T ss_pred CCCHHHHHHHHHHHcChhhcc-CCCcEEEECCc
Confidence 457789999999987544321 34577777665
No 142
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.58 E-value=1.6e-13 Score=116.23 Aligned_cols=196 Identities=17% Similarity=0.120 Sum_probs=122.9
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHhc-------cC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLTL-------LE 94 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~~-------~~ 94 (303)
++||||||+|+||+++++.|+ ..|++|++++|++.+.. ....++.++.+|+.|.+++..+++. .|
T Consensus 2 ~~vlVtGasg~iG~~la~~l~-~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLA-RAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 689999999999999999999 68999999999865421 1123577889999999988887763 46
Q ss_pred ceeEEeecccccC-----ChHHHHHHHHHHHHHHHHHHHHHhhc-cCCccEEEEeecccccccccCCCcccccCCcCcCC
Q 042242 95 DVTHIFWVTWASQ-----FASDMHKCCEQNKAMMCNALNAILPR-AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC 168 (303)
Q Consensus 95 ~V~~~~~~~~~~~-----~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~ 168 (303)
.|+|+++...... ..+...+.++.|+.++.++++.+... .....+++.+++...|.+.
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------- 144 (263)
T PRK06181 81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGV---------------- 144 (263)
T ss_pred EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCC----------------
Confidence 6888876533221 22233457899999999999998653 1112344444432222110
Q ss_pred CCCCCCccchHHHHHHHHH-----H---hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchh
Q 042242 169 PRVSKSNNFYYVLEDLLKE-----K---LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTRE 239 (303)
Q Consensus 169 ~~~p~~~~~~y~~~k~~~e-----~---~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 239 (303)
.+..+ |+.+|...+ + .... +++++++|+.+..+...... .. .+.+....+
T Consensus 145 --~~~~~---Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~---~~----------~~~~~~~~~--- 203 (263)
T PRK06181 145 --PTRSG---YAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRAL---DG----------DGKPLGKSP--- 203 (263)
T ss_pred --CCccH---HHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhc---cc----------ccccccccc---
Confidence 01223 777666443 1 1122 99999999988763211110 00 011111111
Q ss_pred hhhhhcccCccHHHHHHHHHHHhcCc
Q 042242 240 IWEEYCLDGSDSRLVAEQHIWVATND 265 (303)
Q Consensus 240 ~~~~~~~~~~~~~d~a~a~~~~~~~~ 265 (303)
.....+.+++|+|++++.++..+
T Consensus 204 ---~~~~~~~~~~dva~~i~~~~~~~ 226 (263)
T PRK06181 204 ---MQESKIMSAEECAEAILPAIARR 226 (263)
T ss_pred ---ccccCCCCHHHHHHHHHHHhhCC
Confidence 11124788999999999988754
No 143
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.58 E-value=2.3e-13 Score=114.94 Aligned_cols=216 Identities=12% Similarity=0.043 Sum_probs=127.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---------c--cCCCeEEEEecCCCHHHHHHHHhc---
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---------I--QSSSYCFISCDLLNPLDIKRKLTL--- 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---------~--~~~~~~~~~~D~~~~~~l~~~~~~--- 92 (303)
++|+++||||+|+||+++++.|+ +.|++|++++++..... . ...++.++++|+++.++++++++.
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~-~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 85 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLA-AQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA 85 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHH-HCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence 46899999999999999999999 68999777776543210 0 123577889999999998877764
Q ss_pred ----cCceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEe-ecc-cccccccCCCcccccC
Q 042242 93 ----LEDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQ-TGM-KHYVSLQGLPEEKQVR 162 (303)
Q Consensus 93 ----~~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~-s~~-~~y~~~~~~~g~~~~~ 162 (303)
+|.++|.++... ...+..+..+.+++|+.++..+++++......-.+++.+ ++. ..+.
T Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~------------ 153 (257)
T PRK12744 86 AFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT------------ 153 (257)
T ss_pred hhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC------------
Confidence 456888876522 223344555689999999999999887642111122221 111 1110
Q ss_pred CcCcCCCCCCCCccchHHHHHHHHH-----Hh---cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCcee
Q 042242 163 FYDEECPRVSKSNNFYYVLEDLLKE-----KL---AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 163 ~~~e~~~~~p~~~~~~y~~~k~~~e-----~~---~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
+. ... |+.+|...+ ++ ... +++++++|+.+.++....... .....+. .......+
T Consensus 154 ------~~--~~~---Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~--~~~~~~~-~~~~~~~~-- 217 (257)
T PRK12744 154 ------PF--YSA---YAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEG--AEAVAYH-KTAAALSP-- 217 (257)
T ss_pred ------CC--ccc---chhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccc--cchhhcc-cccccccc--
Confidence 00 122 555554443 21 122 899999999997642111100 0000000 00000011
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
.....+.+++|+|.++.+++..... ..|+++++.++..
T Consensus 218 ---------~~~~~~~~~~dva~~~~~l~~~~~~--~~g~~~~~~gg~~ 255 (257)
T PRK12744 218 ---------FSKTGLTDIEDIVPFIRFLVTDGWW--ITGQTILINGGYT 255 (257)
T ss_pred ---------cccCCCCCHHHHHHHHHHhhcccce--eecceEeecCCcc
Confidence 0011366889999999998874321 2358898887744
No 144
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.57 E-value=1.1e-13 Score=120.80 Aligned_cols=106 Identities=21% Similarity=0.190 Sum_probs=81.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHhc-------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLTL------- 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~------- 92 (303)
++|+|+||||+|+||.+++++|+ ..|++|++++|+..+.. . ....+.++.+|+.|.++++++++.
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 83 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALA-KRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP 83 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 46899999999999999999999 68999999999765431 1 123578889999999998887765
Q ss_pred cCceeEEeecccc-----cCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 93 LEDVTHIFWVTWA-----SQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 93 ~~~V~~~~~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
+|.++|.|+.... ..+.......+++|+.++..+++++...
T Consensus 84 iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 129 (322)
T PRK07453 84 LDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLED 129 (322)
T ss_pred ccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 5668888764221 2233445568899999999998887754
No 145
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.57 E-value=4.1e-13 Score=113.72 Aligned_cols=216 Identities=16% Similarity=0.133 Sum_probs=129.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHhc-------cCc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLTL-------LED 95 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~~-------~~~ 95 (303)
++|+++||||+|.||++++++|+ +.|++|++++|+..+.. ....++.++++|+.|.+++.++++. +|.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 83 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALV-AAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI 83 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 46899999999999999999999 68999999999865422 1124578899999999988777764 455
Q ss_pred eeEEeeccc---ccCChHHHHHHHHHHHHHHHHHHHHHhhcc-CCccEEEEeecccccccccCCCcccccCCcCcCCCCC
Q 042242 96 VTHIFWVTW---ASQFASDMHKCCEQNKAMMCNALNAILPRA-KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRV 171 (303)
Q Consensus 96 V~~~~~~~~---~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~ 171 (303)
++|.++... ......+..+.+++|+.++..+++++.... .+-.+++.+++...+.+. +.
T Consensus 84 lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~----------------~~- 146 (261)
T PRK08265 84 LVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQ----------------TG- 146 (261)
T ss_pred EEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC----------------CC-
Confidence 778765421 122344455688999999999988876542 222344444432111000 00
Q ss_pred CCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhh
Q 042242 172 SKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWE 242 (303)
Q Consensus 172 p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 242 (303)
... |..+|...+ ..... +++..++|+.+..+........ .......+ ... .
T Consensus 147 -~~~---Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~--~~~~~~~~----~~~-~--------- 206 (261)
T PRK08265 147 -RWL---YPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGG--DRAKADRV----AAP-F--------- 206 (261)
T ss_pred -Cch---hHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhccc--chhHHHHh----hcc-c---------
Confidence 112 555544332 11122 9999999998766321100000 00000000 000 0
Q ss_pred hhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 243 EYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 243 ~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
..+-.+...+|+|.++++++...... ..|+.+.+.++.
T Consensus 207 ~p~~r~~~p~dva~~~~~l~s~~~~~-~tG~~i~vdgg~ 244 (261)
T PRK08265 207 HLLGRVGDPEEVAQVVAFLCSDAASF-VTGADYAVDGGY 244 (261)
T ss_pred CCCCCccCHHHHHHHHHHHcCccccC-ccCcEEEECCCe
Confidence 11112457889999999988654322 445788787764
No 146
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.57 E-value=6.4e-13 Score=111.29 Aligned_cols=212 Identities=13% Similarity=0.072 Sum_probs=127.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------ccCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------IQSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
++++|+||||+|+||+++++.|+ +.|++|+++.|+..... ....++.++.+|+.+.+++.++++.
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLA-ADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999 68999888877643210 1134578899999999988888774
Q ss_pred -cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcC
Q 042242 93 -LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEE 167 (303)
Q Consensus 93 -~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~ 167 (303)
+|.++|+++.... ........+.++.|+.++.++++++.+....-.+++.+++...+. +.
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~------------~~--- 147 (245)
T PRK12937 83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIAL------------PL--- 147 (245)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccC------------CC---
Confidence 5668888764321 223334445789999999999988876422112344433321110 00
Q ss_pred CCCCCCCccchHHHHHHHHH-----Hh---cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCch
Q 042242 168 CPRVSKSNNFYYVLEDLLKE-----KL---AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTR 238 (303)
Q Consensus 168 ~~~~p~~~~~~y~~~k~~~e-----~~---~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 238 (303)
.+..+ |+.+|...+ .. ... +++++++|+.+-.+....... ... ...+.+ ..|
T Consensus 148 ---~~~~~---Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~--~~~--~~~~~~--~~~------- 208 (245)
T PRK12937 148 ---PGYGP---YAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKS--AEQ--IDQLAG--LAP------- 208 (245)
T ss_pred ---CCCch---hHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCC--HHH--HHHHHh--cCC-------
Confidence 00222 666555443 11 112 899999998877632111100 010 000111 111
Q ss_pred hhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 239 EIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 239 ~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
+....+.+|+|..+++++..+... ..|+.+++.++
T Consensus 209 ------~~~~~~~~d~a~~~~~l~~~~~~~-~~g~~~~~~~g 243 (245)
T PRK12937 209 ------LERLGTPEEIAAAVAFLAGPDGAW-VNGQVLRVNGG 243 (245)
T ss_pred ------CCCCCCHHHHHHHHHHHcCccccC-ccccEEEeCCC
Confidence 112447789999988888654321 34578888764
No 147
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.57 E-value=5.9e-13 Score=112.31 Aligned_cols=217 Identities=15% Similarity=0.077 Sum_probs=127.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--ccCCCeEEEEecCCCHHHHHHHHhc-------cCcee
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--IQSSSYCFISCDLLNPLDIKRKLTL-------LEDVT 97 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~D~~~~~~l~~~~~~-------~~~V~ 97 (303)
++|+++||||+|+||++++++|. +.|++|+++.|+..... ....++.++.+|+.|.+++.++++. .|.++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~-~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFL-REGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 46899999999999999999999 68999988877654321 2223578899999999988887764 45688
Q ss_pred EEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCCcCcCCCCC
Q 042242 98 HIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRV 171 (303)
Q Consensus 98 ~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~ 171 (303)
|+++... ...........+++|+.++..+...+.+.. .+..+++.+++...+... . +
T Consensus 85 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~-----------~-~----- 147 (255)
T PRK06463 85 NNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTA-----------A-E----- 147 (255)
T ss_pred ECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCC-----------C-C-----
Confidence 8865432 122334455688999999766655554431 122345555443222110 0 0
Q ss_pred CCCccchHHHHHHHHH-----Hh---cCC-cceEEecCCceeecCCCCccchhhHHHHHHH-HhhhCCCceeeCCchhhh
Q 042242 172 SKSNNFYYVLEDLLKE-----KL---AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGA-VCKHLNLPFVFGGTREIW 241 (303)
Q Consensus 172 p~~~~~~y~~~k~~~e-----~~---~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~ 241 (303)
.... |+.+|...+ .. ... +++..++|+.+-.+-....... ........ ... ..+
T Consensus 148 ~~~~---Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~--~~~---------- 211 (255)
T PRK06463 148 GTTF---YAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQ-EEAEKLRELFRN--KTV---------- 211 (255)
T ss_pred CccH---hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCc-cchHHHHHHHHh--CCC----------
Confidence 0122 666554443 11 112 9999999998855321100000 00000000 000 111
Q ss_pred hhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 242 EEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 242 ~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+..+.+++++|.++++++..+... ..|..+.+.++.
T Consensus 212 ---~~~~~~~~~va~~~~~l~s~~~~~-~~G~~~~~dgg~ 247 (255)
T PRK06463 212 ---LKTTGKPEDIANIVLFLASDDARY-ITGQVIVADGGR 247 (255)
T ss_pred ---cCCCcCHHHHHHHHHHHcChhhcC-CCCCEEEECCCe
Confidence 112457889999999987654322 345888887765
No 148
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.57 E-value=7.3e-13 Score=111.51 Aligned_cols=213 Identities=13% Similarity=0.101 Sum_probs=129.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc-c----ccCCCeEEEEecCCCHHHHHHHHhc--------c
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT-A----IQSSSYCFISCDLLNPLDIKRKLTL--------L 93 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-~----~~~~~~~~~~~D~~~~~~l~~~~~~--------~ 93 (303)
++|+++||||+|+||+++++.|+ +.|++|+++.++.... . ....++.++++|+.|++++.++++. +
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~-~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~i 82 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFA-REGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPI 82 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHH-HCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 35799999999999999999998 6899988876654321 1 1124678899999999988887764 5
Q ss_pred CceeEEeeccc----------ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCccccc
Q 042242 94 EDVTHIFWVTW----------ASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQV 161 (303)
Q Consensus 94 ~~V~~~~~~~~----------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~ 161 (303)
|.++|.++... ...+.....+.++.|+.++..+++++... .....+++.+++... .
T Consensus 83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~------------~ 150 (253)
T PRK08642 83 TTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLF------------Q 150 (253)
T ss_pred eEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccc------------c
Confidence 66888865321 12233444567999999999999998754 112234444433111 0
Q ss_pred CCcCcCCCCCCCCccchHHHHHHHHH-----Hh---cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCce
Q 042242 162 RFYDEECPRVSKSNNFYYVLEDLLKE-----KL---AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPF 232 (303)
Q Consensus 162 ~~~~e~~~~~p~~~~~~y~~~k~~~e-----~~---~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (303)
.+..|..+ |+.+|...+ ++ ... +++..++||.+..+..... . .. ..+..+.. ..|
T Consensus 151 ------~~~~~~~~---Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~--~-~~-~~~~~~~~--~~~- 214 (253)
T PRK08642 151 ------NPVVPYHD---YTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAA--T-PD-EVFDLIAA--TTP- 214 (253)
T ss_pred ------CCCCCccc---hHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhcc--C-CH-HHHHHHHh--cCC-
Confidence 01111223 777666554 21 122 8999999998876321110 0 01 00111111 111
Q ss_pred eeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 233 VFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 233 ~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+..+.+++|+|.++++++..+... ..|+.+.+.++.
T Consensus 215 ------------~~~~~~~~~va~~~~~l~~~~~~~-~~G~~~~vdgg~ 250 (253)
T PRK08642 215 ------------LRKVTTPQEFADAVLFFASPWARA-VTGQNLVVDGGL 250 (253)
T ss_pred ------------cCCCCCHHHHHHHHHHHcCchhcC-ccCCEEEeCCCe
Confidence 112678899999999988754322 446788777663
No 149
>PRK12742 oxidoreductase; Provisional
Probab=99.57 E-value=6.3e-13 Score=110.78 Aligned_cols=212 Identities=11% Similarity=0.063 Sum_probs=125.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc-c--ccCCCeEEEEecCCCHHHHHHHHhc---cCceeEE
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT-A--IQSSSYCFISCDLLNPLDIKRKLTL---LEDVTHI 99 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-~--~~~~~~~~~~~D~~~~~~l~~~~~~---~~~V~~~ 99 (303)
+++|+|+||||+|+||++++++|+ +.|++|+++.|+.... . ....++.++.+|+.|.+++.+.++. .|.++|.
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~-~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ 82 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFV-TDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVN 82 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHH-HCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEEC
Confidence 456899999999999999999999 6899998887653321 1 1122467888999999888777764 4558888
Q ss_pred eecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCc
Q 042242 100 FWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSN 175 (303)
Q Consensus 100 ~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~ 175 (303)
++.... ..+..+..+.+++|+.++..++..+......-.+++.+++.... .. +..+..+
T Consensus 83 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~-----------~~------~~~~~~~ 145 (237)
T PRK12742 83 AGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGD-----------RM------PVAGMAA 145 (237)
T ss_pred CCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccc-----------cC------CCCCCcc
Confidence 654321 22334455689999999998877766542112344444331110 00 1111223
Q ss_pred cchHHHHHHHHH-----H---hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcc
Q 042242 176 NFYYVLEDLLKE-----K---LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCL 246 (303)
Q Consensus 176 ~~~y~~~k~~~e-----~---~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 246 (303)
|+.+|...+ . .... +++++++|+.+..+..... ... ...... ..+ +.
T Consensus 146 ---Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~----~~~--~~~~~~--~~~-------------~~ 201 (237)
T PRK12742 146 ---YAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPAN----GPM--KDMMHS--FMA-------------IK 201 (237)
T ss_pred ---hHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccc----cHH--HHHHHh--cCC-------------CC
Confidence 666555443 1 1122 9999999999976321111 010 000111 111 11
Q ss_pred cCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 247 DGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 247 ~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
.+.+.++++.++.+++..... ...|..+.+.++
T Consensus 202 ~~~~p~~~a~~~~~l~s~~~~-~~~G~~~~~dgg 234 (237)
T PRK12742 202 RHGRPEEVAGMVAWLAGPEAS-FVTGAMHTIDGA 234 (237)
T ss_pred CCCCHHHHHHHHHHHcCcccC-cccCCEEEeCCC
Confidence 145778999998888755432 134577777655
No 150
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.56 E-value=5.4e-13 Score=113.11 Aligned_cols=214 Identities=17% Similarity=0.078 Sum_probs=130.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHh-------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
+.+++++||||+|+||.+++++|+ +.|++|++++|++.+.. . ...++.++.+|+++.+++.++++
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~-~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 86 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFA-EAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFG 86 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 456899999999999999999999 68999999999865422 0 12357888999999998877766
Q ss_pred ccCceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhcc---CCccEEEEeecccccccccCCCcccccCCc
Q 042242 92 LLEDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPRA---KALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 92 ~~~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~---~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
.+|.|+|+++... ......+..+.+++|+.++.++++++.... ....+++.+++...+ .+
T Consensus 87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~------------~~- 153 (263)
T PRK07814 87 RLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGR------------LA- 153 (263)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEcccccc------------CC-
Confidence 3466888876422 122334455688999999999999987531 122344444431111 00
Q ss_pred CcCCCCCCCCccchHHHHHHHHH---------HhcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE---------KLAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e---------~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
..+..+ |+.+|...+ .... ++++.++|+.+..+......+ ...+. ..+.. ..+
T Consensus 154 -----~~~~~~---Y~~sK~a~~~~~~~~~~e~~~~-i~v~~i~Pg~v~t~~~~~~~~-~~~~~--~~~~~--~~~---- 215 (263)
T PRK07814 154 -----GRGFAA---YGTAKAALAHYTRLAALDLCPR-IRVNAIAPGSILTSALEVVAA-NDELR--APMEK--ATP---- 215 (263)
T ss_pred -----CCCCch---hHHHHHHHHHHHHHHHHHHCCC-ceEEEEEeCCCcCchhhhccC-CHHHH--HHHHh--cCC----
Confidence 001233 777665543 1122 788999998886532111000 00100 00000 011
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+..+.+++|+|+++++++..... ...|..+.+.++.
T Consensus 216 ---------~~~~~~~~~va~~~~~l~~~~~~-~~~g~~~~~~~~~ 251 (263)
T PRK07814 216 ---------LRRLGDPEDIAAAAVYLASPAGS-YLTGKTLEVDGGL 251 (263)
T ss_pred ---------CCCCcCHHHHHHHHHHHcCcccc-CcCCCEEEECCCc
Confidence 11245788999999998754322 1345777776553
No 151
>PRK08017 oxidoreductase; Provisional
Probab=99.56 E-value=2.8e-13 Score=114.28 Aligned_cols=200 Identities=16% Similarity=0.132 Sum_probs=117.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhcc--------Ccee
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLL--------EDVT 97 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~--------~~V~ 97 (303)
|.++|+||||+|+||+++++.|+ +.|++|++++|++.+.. ....+++.+++|+.|.+++.+.++.+ +.++
T Consensus 1 m~k~vlVtGasg~IG~~la~~l~-~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii 79 (256)
T PRK08017 1 MQKSVLITGCSSGIGLEAALELK-RRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLF 79 (256)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence 45789999999999999999999 67999999999875432 22346788999999998877666443 3366
Q ss_pred EEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCCCC
Q 042242 98 HIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRV 171 (303)
Q Consensus 98 ~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~ 171 (303)
|.++.... ..+.....+.++.|+.++.++...+.+. .....+++..++...+ . +. +
T Consensus 80 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~--~----------~~----~-- 141 (256)
T PRK08017 80 NNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGL--I----------ST----P-- 141 (256)
T ss_pred ECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccc--c----------CC----C--
Confidence 66543221 1133344468899999888764444332 1112344444432111 0 00 0
Q ss_pred CCCccchHHHHHHHHHH--------hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhh
Q 042242 172 SKSNNFYYVLEDLLKEK--------LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWE 242 (303)
Q Consensus 172 p~~~~~~y~~~k~~~e~--------~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 242 (303)
...+ |+.+|...+. .... ++++++||+.+........ ... ....+...++
T Consensus 142 ~~~~---Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~----~~~--------~~~~~~~~~~------ 200 (256)
T PRK08017 142 GRGA---YAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNV----NQT--------QSDKPVENPG------ 200 (256)
T ss_pred CccH---HHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcc----cch--------hhccchhhhH------
Confidence 0223 6766654441 1222 9999999987754211110 000 0011111122
Q ss_pred hhcccCccHHHHHHHHHHHhcCcC
Q 042242 243 EYCLDGSDSRLVAEQHIWVATNDD 266 (303)
Q Consensus 243 ~~~~~~~~~~d~a~a~~~~~~~~~ 266 (303)
.....+++++|++++++.++..+.
T Consensus 201 ~~~~~~~~~~d~a~~~~~~~~~~~ 224 (256)
T PRK08017 201 IAARFTLGPEAVVPKLRHALESPK 224 (256)
T ss_pred HHhhcCCCHHHHHHHHHHHHhCCC
Confidence 111235788999999999887664
No 152
>PRK08643 acetoin reductase; Validated
Probab=99.56 E-value=8.9e-13 Score=111.26 Aligned_cols=106 Identities=16% Similarity=0.145 Sum_probs=79.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHhc-------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLTL------- 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~------- 92 (303)
|+|+++||||+|+||++++++|+ +.|++|++++|++.... . ...++.++++|+.+++++.++++.
T Consensus 1 ~~k~~lItGas~giG~~la~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 1 MSKVALVTGAGQGIGFAIAKRLV-EDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGD 79 (256)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999 68999999999865421 1 123577889999999988777764
Q ss_pred cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 93 LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 93 ~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
+|.++|+++.... ........+.+++|+.++..+++++...
T Consensus 80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 124 (256)
T PRK08643 80 LNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEA 124 (256)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4668888754321 1123344457899999988877777654
No 153
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.56 E-value=6.9e-13 Score=112.01 Aligned_cols=107 Identities=17% Similarity=0.118 Sum_probs=81.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHhc-----
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLTL----- 92 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~~----- 92 (303)
.+.+++|+||||+|+||++++++|+ +.|++|++++|++.... ....++.++.+|+.+.+++.+.++.
T Consensus 6 ~~~~k~ilItGasg~IG~~~a~~l~-~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (258)
T PRK06949 6 NLEGKVALVTGASSGLGARFAQVLA-QAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA 84 (258)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 4567999999999999999999999 68999999999875532 1123678899999999988887764
Q ss_pred --cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhh
Q 042242 93 --LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILP 132 (303)
Q Consensus 93 --~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~ 132 (303)
+|.++|+++.... ..........++.|+.++..+++++..
T Consensus 85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 130 (258)
T PRK06949 85 GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAK 130 (258)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHH
Confidence 5668888664321 122344556789999999988887764
No 154
>PRK08264 short chain dehydrogenase; Validated
Probab=99.56 E-value=2.1e-13 Score=113.74 Aligned_cols=158 Identities=15% Similarity=0.117 Sum_probs=107.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhc---cCceeEEeec
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTL---LEDVTHIFWV 102 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~---~~~V~~~~~~ 102 (303)
++++|+||||+|+||+++++.|+ +.|+ +|++++|++.+......++.++.+|+.|.+++.++++. +|.|+|.++.
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~-~~G~~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 83 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLL-ARGAAKVYAAARDPESVTDLGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAGI 83 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCcccEEEEecChhhhhhcCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 45799999999999999999999 6898 89999998765332235688999999999999888875 4568888765
Q ss_pred cc-----ccCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCc
Q 042242 103 TW-----ASQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSN 175 (303)
Q Consensus 103 ~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~ 175 (303)
.. .........+.++.|+.++..+++++.+.. ....+++.+++...|.+. .+..+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~------------------~~~~~ 145 (238)
T PRK08264 84 FRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNF------------------PNLGT 145 (238)
T ss_pred CCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCC------------------CCchH
Confidence 21 222344555678999999999999876531 122344444443222110 00222
Q ss_pred cchHHHHHHHHH--------HhcCC-cceEEecCCceeec
Q 042242 176 NFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGS 206 (303)
Q Consensus 176 ~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~ 206 (303)
|+.+|...+ ..... ++++++||+.+.++
T Consensus 146 ---y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~ 182 (238)
T PRK08264 146 ---YSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTD 182 (238)
T ss_pred ---hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccc
Confidence 666555443 11112 99999999988763
No 155
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.56 E-value=9.5e-13 Score=111.25 Aligned_cols=214 Identities=11% Similarity=0.074 Sum_probs=130.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----c--cCCCeEEEEecCCCHHHHHHHHhc-------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----I--QSSSYCFISCDLLNPLDIKRKLTL------- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~--~~~~~~~~~~D~~~~~~l~~~~~~------- 92 (303)
+++|+||||||+|+||..++++|+ +.|++|++++|+..... . ...++.++.+|+.+.+++.++++.
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALA-KAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 457899999999999999999999 68999999998732111 1 123578899999999988887763
Q ss_pred cCceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCc
Q 042242 93 LEDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 93 ~~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
+|.++|+++... ......+..+.++.|+.++..+++++... .....+++.+++...+.+.
T Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------------- 157 (258)
T PRK06935 92 IDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGG-------------- 157 (258)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCC--------------
Confidence 466888866432 12233344568899999988888777654 1223345555543222111
Q ss_pred CCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCC
Q 042242 167 ECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGG 236 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 236 (303)
+. ..+ |+.+|...+ +. .+ ++++.++|+.+..+....... ... ....+.. ..|
T Consensus 158 --~~--~~~---Y~asK~a~~~~~~~la~e~~~~g-i~v~~i~PG~v~t~~~~~~~~-~~~--~~~~~~~--~~~----- 219 (258)
T PRK06935 158 --KF--VPA---YTASKHGVAGLTKAFANELAAYN-IQVNAIAPGYIKTANTAPIRA-DKN--RNDEILK--RIP----- 219 (258)
T ss_pred --CC--chh---hHHHHHHHHHHHHHHHHHhhhhC-eEEEEEEeccccccchhhccc-ChH--HHHHHHh--cCC-----
Confidence 00 112 666555443 11 23 999999999987642211100 000 0001111 111
Q ss_pred chhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 237 TREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
...+.+++|+|.++++++..... ...|.++.+.++.
T Consensus 220 --------~~~~~~~~dva~~~~~l~s~~~~-~~~G~~i~~dgg~ 255 (258)
T PRK06935 220 --------AGRWGEPDDLMGAAVFLASRASD-YVNGHILAVDGGW 255 (258)
T ss_pred --------CCCCCCHHHHHHHHHHHcChhhc-CCCCCEEEECCCe
Confidence 11255778899999888764432 2446788777764
No 156
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.56 E-value=5.9e-13 Score=111.19 Aligned_cols=106 Identities=16% Similarity=0.125 Sum_probs=80.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHh-------c
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLT-------L 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~-------~ 92 (303)
.+++++||||+|+||++++++|+ ..|++|++++|++.+.. . ...++.++.+|+.+.+++.++++ .
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~-~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALA-KEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 35799999999999999999999 68999999999865421 1 12357788999999999888876 4
Q ss_pred cCceeEEeeccccc----CChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 93 LEDVTHIFWVTWAS----QFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 93 ~~~V~~~~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
+|.|+|+++..... .......+.++.|+.++.++++++...
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 129 (239)
T PRK07666 85 IDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPS 129 (239)
T ss_pred ccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 56688887654321 223334457899999999998888753
No 157
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.56 E-value=1.1e-13 Score=118.27 Aligned_cols=156 Identities=17% Similarity=0.188 Sum_probs=102.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhc--------cCcee
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTL--------LEDVT 97 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~--------~~~V~ 97 (303)
|+++|+||||+|+||+++++.|. +.|++|++++|++.... ....+++++.+|++|.++++++++. +|.++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~-~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQ-SDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 56899999999999999999998 68999999999876532 2234688899999999988777654 34577
Q ss_pred EEeecccc----cCChHHHHHHHHHHHHHHHH----HHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCC
Q 042242 98 HIFWVTWA----SQFASDMHKCCEQNKAMMCN----ALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECP 169 (303)
Q Consensus 98 ~~~~~~~~----~~~~~~~~~~~~~n~~~~~~----ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~ 169 (303)
|.++.... ..+..+..+.+++|+.++.. ++..+++. ...+++.+|+...+..
T Consensus 82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~--~~g~iv~isS~~~~~~------------------ 141 (277)
T PRK05993 82 NNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ--GQGRIVQCSSILGLVP------------------ 141 (277)
T ss_pred ECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc--CCCEEEEECChhhcCC------------------
Confidence 77654322 12234445688999999554 44444443 2234555544222100
Q ss_pred CCCCCccchHHHHHHHHHH--------hcCC-cceEEecCCceeec
Q 042242 170 RVSKSNNFYYVLEDLLKEK--------LAGK-VAWSVHRPGLLLGS 206 (303)
Q Consensus 170 ~~p~~~~~~y~~~k~~~e~--------~~~~-~~~~ilRp~~v~G~ 206 (303)
..+..+ |+.+|...+. .... +++++++||.+-.+
T Consensus 142 ~~~~~~---Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~ 184 (277)
T PRK05993 142 MKYRGA---YNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR 184 (277)
T ss_pred CCccch---HHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence 001223 7776665541 1122 99999999988763
No 158
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.56 E-value=8.3e-13 Score=111.65 Aligned_cols=215 Identities=16% Similarity=0.121 Sum_probs=128.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHhc-------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLTL------- 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~------- 92 (303)
++|++|||||+|+||+++++.|+ +.|++|++++|+..+.. . ...++.++.+|++|+++++++++.
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALG-EAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 46899999999999999999999 68999999999765421 0 123567899999999988766653
Q ss_pred cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc---cCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 93 LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR---AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 93 ~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
.|.|+|+++.... ........+.++.|+.++.++++++... .....+++.+++...+.+.. +.
T Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~---------~~- 159 (259)
T PRK08213 90 VDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNP---------PE- 159 (259)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCC---------cc-
Confidence 4668898764321 1223344457889999999999987653 12233555555432221110 00
Q ss_pred cCCCCCCCCccchHHHHHHHHH-----Hh---cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE-----KL---AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGG 236 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e-----~~---~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 236 (303)
..+..+ |..+|...+ ++ ... +++..++|+.+-.+.... ....+. ..+.. ..++.
T Consensus 160 ----~~~~~~---Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~---~~~~~~--~~~~~--~~~~~--- 222 (259)
T PRK08213 160 ----VMDTIA---YNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRG---TLERLG--EDLLA--HTPLG--- 222 (259)
T ss_pred ----ccCcch---HHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhh---hhHHHH--HHHHh--cCCCC---
Confidence 001233 666655443 11 112 889999998876532111 111110 00111 12211
Q ss_pred chhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 237 TREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
.+.+.+++|....+++...... ..|..+++.++
T Consensus 223 ----------~~~~~~~va~~~~~l~~~~~~~-~~G~~~~~~~~ 255 (259)
T PRK08213 223 ----------RLGDDEDLKGAALLLASDASKH-ITGQILAVDGG 255 (259)
T ss_pred ----------CCcCHHHHHHHHHHHhCccccC-ccCCEEEECCC
Confidence 1346778888777776544321 34677877765
No 159
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.56 E-value=1.1e-13 Score=116.88 Aligned_cols=158 Identities=12% Similarity=0.081 Sum_probs=103.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----cc-CCCeEEEEecCCCHHHHHHHHhc-------c
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----IQ-SSSYCFISCDLLNPLDIKRKLTL-------L 93 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~-~~~~~~~~~D~~~~~~l~~~~~~-------~ 93 (303)
|+++|+||||+|+||+++++.|+ +.|++|++++|++.... .. ..++.++.+|++|.+++.++++. .
T Consensus 1 ~~~~vlItGas~gIG~~la~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 1 MPLKVFITGASSGIGQALAREYA-RQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLP 79 (257)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 45799999999999999999999 68999999999865432 11 11678899999999988877664 4
Q ss_pred CceeEEeeccccc-----CChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCc
Q 042242 94 EDVTHIFWVTWAS-----QFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 94 ~~V~~~~~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
|.++|.++..... .+.....+.+++|+.++..+++.+... ..+..+++.+++...+.+ .
T Consensus 80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~------------~-- 145 (257)
T PRK07024 80 DVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRG------------L-- 145 (257)
T ss_pred CEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC------------C--
Confidence 6688886643211 233445568999999999988755432 112234444443212100 0
Q ss_pred CCCCCCCCccchHHHHHHHHH-----H---hcCC-cceEEecCCceeec
Q 042242 167 ECPRVSKSNNFYYVLEDLLKE-----K---LAGK-VAWSVHRPGLLLGS 206 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~e-----~---~~~~-~~~~ilRp~~v~G~ 206 (303)
+. ... |+.+|...+ + .... ++++++||+.+.++
T Consensus 146 --~~--~~~---Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~ 187 (257)
T PRK07024 146 --PG--AGA---YSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTP 187 (257)
T ss_pred --CC--Ccc---hHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCc
Confidence 00 122 666555443 1 1222 99999999999873
No 160
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.56 E-value=1.8e-13 Score=115.49 Aligned_cols=118 Identities=14% Similarity=0.066 Sum_probs=83.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHh-ccCceeE
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLT-LLEDVTH 98 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~-~~~~V~~ 98 (303)
|+++||||||+|+||++++++|+ ..|++|++++|++.+.. ....++.++.+|+.|.+++.+++. .+|.|+|
T Consensus 1 m~~~vlVtGasg~iG~~ia~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~ 79 (257)
T PRK09291 1 MSKTILITGAGSGFGREVALRLA-RKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLN 79 (257)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEE
Confidence 46799999999999999999999 68999999999765421 112357889999999999988886 6777888
Q ss_pred Eeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeec
Q 042242 99 IFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTG 145 (303)
Q Consensus 99 ~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~ 145 (303)
+++.... ..+.......+++|+.++..+.+.+... .....+++.+|+
T Consensus 80 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS 132 (257)
T PRK09291 80 NAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSS 132 (257)
T ss_pred CCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcC
Confidence 8764321 1223333447888998887776655432 112245555544
No 161
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.55 E-value=4.7e-13 Score=111.93 Aligned_cols=190 Identities=16% Similarity=0.111 Sum_probs=121.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc-------cCCCeEEEEecCCCHHHHHHHHhc-------c
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI-------QSSSYCFISCDLLNPLDIKRKLTL-------L 93 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~~~l~~~~~~-------~ 93 (303)
+|+++||||+|+||+.++++|+ +.|++|++++|++.+... ...++.++.+|++|.+++..+++. +
T Consensus 6 ~k~vlItG~sg~iG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (241)
T PRK07454 6 MPRALITGASSGIGKATALAFA-KAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP 84 (241)
T ss_pred CCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4799999999999999999999 689999999998654320 123678899999999988777764 5
Q ss_pred CceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcC
Q 042242 94 EDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEE 167 (303)
Q Consensus 94 ~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~ 167 (303)
|.++|.++.... ........+.+++|+.++.++++.+... ..+..+++.+++...|...
T Consensus 85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~--------------- 149 (241)
T PRK07454 85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAF--------------- 149 (241)
T ss_pred CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCC---------------
Confidence 668888654321 1223344557899999988888777543 1223455555543233111
Q ss_pred CCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCc
Q 042242 168 CPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGT 237 (303)
Q Consensus 168 ~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 237 (303)
.+..+ |+.+|...+ .. .+ ++++++||+.+-.+..... . ... ....
T Consensus 150 ---~~~~~---Y~~sK~~~~~~~~~~a~e~~~~g-i~v~~i~pg~i~t~~~~~~-----~-----------~~~-~~~~- 204 (241)
T PRK07454 150 ---PQWGA---YCVSKAALAAFTKCLAEEERSHG-IRVCTITLGAVNTPLWDTE-----T-----------VQA-DFDR- 204 (241)
T ss_pred ---CCccH---HHHHHHHHHHHHHHHHHHhhhhC-CEEEEEecCcccCCccccc-----c-----------ccc-cccc-
Confidence 00223 666555433 11 23 9999999999876321100 0 000 0000
Q ss_pred hhhhhhhcccCccHHHHHHHHHHHhcCcC
Q 042242 238 REIWEEYCLDGSDSRLVAEQHIWVATNDD 266 (303)
Q Consensus 238 ~~~~~~~~~~~~~~~d~a~a~~~~~~~~~ 266 (303)
....+.+++|+++++++..+.
T Consensus 205 --------~~~~~~~~va~~~~~l~~~~~ 225 (241)
T PRK07454 205 --------SAMLSPEQVAQTILHLAQLPP 225 (241)
T ss_pred --------ccCCCHHHHHHHHHHHHcCCc
Confidence 114678999999999987764
No 162
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.55 E-value=2.6e-13 Score=113.66 Aligned_cols=211 Identities=15% Similarity=0.097 Sum_probs=126.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHhc-------cCc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLTL-------LED 95 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~~-------~~~ 95 (303)
++++++||||+|+||+++++.|+ +.|+.|++.+|+..+.. ....++.++.+|+.+.+++.++++. +|.
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLH-AQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 46899999999999999999999 68899988888765432 1123578889999999988776643 566
Q ss_pred eeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCC
Q 042242 96 VTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECP 169 (303)
Q Consensus 96 V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~ 169 (303)
|+|+++.... .....+..+.++.|+.++.++++++.+. .....+++++++...+.+. +
T Consensus 84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~------ 147 (245)
T PRK12936 84 LVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGN----------P------ 147 (245)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCC----------C------
Confidence 8888765321 1233444568899999999888887543 1122344554432121010 0
Q ss_pred CCCCCccchHHHHHH--------HHHHh--cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchh
Q 042242 170 RVSKSNNFYYVLEDL--------LKEKL--AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTRE 239 (303)
Q Consensus 170 ~~p~~~~~~y~~~k~--------~~e~~--~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 239 (303)
. ... |+.+|. +.... .+ +++++++|+.+..+..... .... ...... ..
T Consensus 148 ~--~~~---Y~~sk~a~~~~~~~la~~~~~~~-i~v~~i~pg~~~t~~~~~~----~~~~-~~~~~~--~~--------- 205 (245)
T PRK12936 148 G--QAN---YCASKAGMIGFSKSLAQEIATRN-VTVNCVAPGFIESAMTGKL----NDKQ-KEAIMG--AI--------- 205 (245)
T ss_pred C--Ccc---hHHHHHHHHHHHHHHHHHhhHhC-eEEEEEEECcCcCchhccc----ChHH-HHHHhc--CC---------
Confidence 0 112 444443 22111 23 9999999997765321110 0000 000000 01
Q ss_pred hhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 240 IWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 240 ~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
.+..+.++++++.++++++..+... ..|+.+++.++.
T Consensus 206 ----~~~~~~~~~~ia~~~~~l~~~~~~~-~~G~~~~~~~g~ 242 (245)
T PRK12936 206 ----PMKRMGTGAEVASAVAYLASSEAAY-VTGQTIHVNGGM 242 (245)
T ss_pred ----CCCCCcCHHHHHHHHHHHcCccccC-cCCCEEEECCCc
Confidence 1112457889999998877544321 345889888763
No 163
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.55 E-value=8.2e-13 Score=110.14 Aligned_cols=205 Identities=15% Similarity=0.135 Sum_probs=125.1
Q ss_pred EEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc-c-----cc--CCCeEEEEecCCCHHHHHHHHhcc-------Cc
Q 042242 31 AVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT-A-----IQ--SSSYCFISCDLLNPLDIKRKLTLL-------ED 95 (303)
Q Consensus 31 vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-~-----~~--~~~~~~~~~D~~~~~~l~~~~~~~-------~~ 95 (303)
|+|||++|+||++++++|+ +.|++|++++|+.... . .. ...++++.+|++|.+++.++++.+ |.
T Consensus 1 vlItG~~g~iG~~la~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 79 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLA-KEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDI 79 (239)
T ss_pred CEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 5899999999999999999 6899999999876321 1 11 124778999999999888877653 66
Q ss_pred eeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeeccc-ccccccCCCcccccCCcCcCC
Q 042242 96 VTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMK-HYVSLQGLPEEKQVRFYDEEC 168 (303)
Q Consensus 96 V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~-~y~~~~~~~g~~~~~~~~e~~ 168 (303)
|+|.++.... ........+.++.|+.++..+++.+.... ....+++++++.. .|+.+
T Consensus 80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~---------------- 143 (239)
T TIGR01830 80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNA---------------- 143 (239)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCC----------------
Confidence 8888765321 22334455688999999999999887641 2223455544421 22111
Q ss_pred CCCCCCccchHHHHHHHHH---------H-hcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCch
Q 042242 169 PRVSKSNNFYYVLEDLLKE---------K-LAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTR 238 (303)
Q Consensus 169 ~~~p~~~~~~y~~~k~~~e---------~-~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 238 (303)
+... |+..|...+ . ..+ ++++++||+.+.++... ... .. ....+.. ..+
T Consensus 144 ---~~~~---y~~~k~a~~~~~~~l~~~~~~~g-~~~~~i~pg~~~~~~~~-~~~--~~--~~~~~~~--~~~------- 202 (239)
T TIGR01830 144 ---GQAN---YAASKAGVIGFTKSLAKELASRN-ITVNAVAPGFIDTDMTD-KLS--EK--VKKKILS--QIP------- 202 (239)
T ss_pred ---CCch---hHHHHHHHHHHHHHHHHHHhhcC-eEEEEEEECCCCChhhh-hcC--hH--HHHHHHh--cCC-------
Confidence 0112 555543222 1 123 89999999887663211 110 00 0001111 111
Q ss_pred hhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 239 EIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 239 ~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
+.-..+++|+|.++++++...... ..|++||+.++
T Consensus 203 ------~~~~~~~~~~a~~~~~~~~~~~~~-~~g~~~~~~~g 237 (239)
T TIGR01830 203 ------LGRFGTPEEVANAVAFLASDEASY-ITGQVIHVDGG 237 (239)
T ss_pred ------cCCCcCHHHHHHHHHHHhCcccCC-cCCCEEEeCCC
Confidence 111447789999888877543221 34589998765
No 164
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.55 E-value=7.9e-13 Score=109.46 Aligned_cols=195 Identities=15% Similarity=0.148 Sum_probs=126.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----cc---CCCeEEEEecCCCHHHHHHHHhc----
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----IQ---SSSYCFISCDLLNPLDIKRKLTL---- 92 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~---~~~~~~~~~D~~~~~~l~~~~~~---- 92 (303)
.+++++++|||||+.||..+++.|. .+||+|+++.|+.++.. .+ .-.++++.+|+++++++..+.+.
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA-~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~ 81 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLA-RRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER 81 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence 4567899999999999999999999 79999999999987643 11 12467899999999988776653
Q ss_pred ---cCceeEEeecc----cccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCC
Q 042242 93 ---LEDVTHIFWVT----WASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRF 163 (303)
Q Consensus 93 ---~~~V~~~~~~~----~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~ 163 (303)
+|.+++.|+.. +...+..+..+++++|+.++..+-.++... ..+--+++-++|...|..
T Consensus 82 ~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p------------ 149 (265)
T COG0300 82 GGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIP------------ 149 (265)
T ss_pred CCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCC------------
Confidence 45566665543 234456666789999999988888777654 222334444444323211
Q ss_pred cCcCCCCCCCCc-cchHHHHHHH--------HHHhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCcee
Q 042242 164 YDEECPRVSKSN-NFYYVLEDLL--------KEKLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 164 ~~e~~~~~p~~~-~~~y~~~k~~--------~e~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
.| ...|+.+|.. .+...+. ++++.+.||.+...... . .. ......
T Consensus 150 ----------~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-~----~~----------~~~~~~ 204 (265)
T COG0300 150 ----------TPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD-A----KG----------SDVYLL 204 (265)
T ss_pred ----------CcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc-c----cc----------cccccc
Confidence 11 1226665543 3334444 99999999988873221 0 00 000111
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcC
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDD 266 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~ 266 (303)
.+ .. .+.+++++|+..+..+...+
T Consensus 205 ~~---~~------~~~~~~~va~~~~~~l~~~k 228 (265)
T COG0300 205 SP---GE------LVLSPEDVAEAALKALEKGK 228 (265)
T ss_pred cc---hh------hccCHHHHHHHHHHHHhcCC
Confidence 11 11 25678889999998887754
No 165
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.55 E-value=6.9e-13 Score=112.20 Aligned_cols=219 Identities=13% Similarity=0.137 Sum_probs=130.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c----cCCCeEEEEecCCCHHHHHHHHhc-----
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I----QSSSYCFISCDLLNPLDIKRKLTL----- 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~----~~~~~~~~~~D~~~~~~l~~~~~~----- 92 (303)
.+|+|+||||+|+||+++++.|+ +.|++|++++|+++... . ...++.++++|++|.+++.++++.
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~-~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFA-REGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999999 68999999999765432 1 123577899999999988877763
Q ss_pred --cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCCc
Q 042242 93 --LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 93 --~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
+|.++|.++.... ..+..+..+.+++|+.++..+++++.... ....+++.+++...+...
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 152 (260)
T PRK07063 85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKII------------ 152 (260)
T ss_pred CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCC------------
Confidence 5668888764321 12234445688999999999988876541 122344444442121000
Q ss_pred CcCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccch-hhHHHHHHHHhhhCCCceee
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNF-LGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 234 (303)
+ ...+ |+.+|...+ ..... +++..++|+.+-.+........ ............ ..|
T Consensus 153 ----~--~~~~---Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~--- 218 (260)
T PRK07063 153 ----P--GCFP---YPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLA--LQP--- 218 (260)
T ss_pred ----C--CchH---HHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHh--cCC---
Confidence 0 0122 666555433 11222 9999999998865321100000 000000000000 111
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF 283 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~ 283 (303)
+..+.+++|+|.++++++...... ..|+...+.++...
T Consensus 219 ----------~~r~~~~~~va~~~~fl~s~~~~~-itG~~i~vdgg~~~ 256 (260)
T PRK07063 219 ----------MKRIGRPEEVAMTAVFLASDEAPF-INATCITIDGGRSV 256 (260)
T ss_pred ----------CCCCCCHHHHHHHHHHHcCccccc-cCCcEEEECCCeee
Confidence 112557889999999987654322 34577777766543
No 166
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.55 E-value=1.2e-12 Score=110.30 Aligned_cols=213 Identities=9% Similarity=0.027 Sum_probs=129.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHhc-------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLTL------- 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~------- 92 (303)
.+|++|||||+|+||++++++|+ +.|++|++++|++.+.. . ...++..+.+|+.|.+++.+.++.
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~-~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLA-EYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP 86 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-HcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 46899999999999999999999 68999999999865432 1 123567788999999988877654
Q ss_pred cCceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCCcCc
Q 042242 93 LEDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 93 ~~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
.|.|+|.++... ......+..+.+++|+.++..+++++.... ....+++.+++.... . +.
T Consensus 87 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~------~------~~-- 152 (254)
T PRK08085 87 IDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSE------L------GR-- 152 (254)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhc------c------CC--
Confidence 466888876432 122334455689999999998888877641 222344444432111 0 00
Q ss_pred CCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCC
Q 042242 167 ECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGG 236 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 236 (303)
.+..+ |+.+|...+ +. .+ +++..++|+.+..+........ .. +..... ...|
T Consensus 153 ----~~~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~pG~~~t~~~~~~~~~-~~---~~~~~~-~~~p----- 214 (254)
T PRK08085 153 ----DTITP---YAASKGAVKMLTRGMCVELARHN-IQVNGIAPGYFKTEMTKALVED-EA---FTAWLC-KRTP----- 214 (254)
T ss_pred ----CCCcc---hHHHHHHHHHHHHHHHHHHHhhC-eEEEEEEeCCCCCcchhhhccC-HH---HHHHHH-hcCC-----
Confidence 00122 555554333 12 23 9999999999987532111000 01 001000 0112
Q ss_pred chhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 237 TREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+..+.+.+|+|.++++++...... ..|+...+.++.
T Consensus 215 --------~~~~~~~~~va~~~~~l~~~~~~~-i~G~~i~~dgg~ 250 (254)
T PRK08085 215 --------AARWGDPQELIGAAVFLSSKASDF-VNGHLLFVDGGM 250 (254)
T ss_pred --------CCCCcCHHHHHHHHHHHhCccccC-CcCCEEEECCCe
Confidence 112457789999888887643321 345666666654
No 167
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.55 E-value=1.7e-12 Score=109.28 Aligned_cols=213 Identities=12% Similarity=0.078 Sum_probs=125.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEec-CCcccc-------ccCCCeEEEEecCCCHHHHHHHHh-------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIAR-KPEITA-------IQSSSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r-~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
++|+++||||+|+||++++++|+ +.|++|+++.+ +..... .....+..+.+|+.+.+++...++
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLA-NDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-HCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 36899999999999999999999 68999988754 333211 112346678899999876654442
Q ss_pred ------ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCccccc
Q 042242 92 ------LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQV 161 (303)
Q Consensus 92 ------~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~ 161 (303)
.+|.++|.++.... ........+.+++|+.++..+++++......-.+++.+++...+.
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~----------- 150 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI----------- 150 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccccc-----------
Confidence 35668888764321 122333445789999999999988776522223444444322210
Q ss_pred CCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCc
Q 042242 162 RFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLP 231 (303)
Q Consensus 162 ~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (303)
+.. ...+ |+.+|...+ +. .+ +++..+.|+.|.++....... ... .....+ ..
T Consensus 151 -~~~------~~~~---Y~~sKaa~~~~~~~la~e~~~~g-irvn~v~Pg~v~t~~~~~~~~--~~~--~~~~~~-~~-- 212 (252)
T PRK12747 151 -SLP------DFIA---YSMTKGAINTMTFTLAKQLGARG-ITVNAILPGFIKTDMNAELLS--DPM--MKQYAT-TI-- 212 (252)
T ss_pred -CCC------Cchh---HHHHHHHHHHHHHHHHHHHhHcC-CEEEEEecCCccCchhhhccc--CHH--HHHHHH-hc--
Confidence 000 0123 776665543 11 23 999999999998742211100 000 000000 00
Q ss_pred eeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 232 FVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 232 ~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
.....+.+++|+|.++++++..... ...|+.+.+.++.
T Consensus 213 -----------~~~~~~~~~~dva~~~~~l~s~~~~-~~~G~~i~vdgg~ 250 (252)
T PRK12747 213 -----------SAFNRLGEVEDIADTAAFLASPDSR-WVTGQLIDVSGGS 250 (252)
T ss_pred -----------CcccCCCCHHHHHHHHHHHcCcccc-CcCCcEEEecCCc
Confidence 0111256889999999888754322 1345778777653
No 168
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.54 E-value=1.6e-12 Score=109.58 Aligned_cols=214 Identities=14% Similarity=0.056 Sum_probs=127.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHh-------c
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLT-------L 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~-------~ 92 (303)
++|+++||||+|.||.+++++|+ +.|++|++++|++.+.. . ...++.++.+|+.+.+++.++++ .
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFA-REGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG 83 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 45899999999999999999999 68999999999865432 1 12357788999999998877766 3
Q ss_pred cCceeEEeeccc-----ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 93 LEDVTHIFWVTW-----ASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 93 ~~~V~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
+|.++|.++... ...+..+..+.+++|+.++..+++++... .....+++.+++...+.. +.
T Consensus 84 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~-----------~~- 151 (254)
T PRK07478 84 LDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTA-----------GF- 151 (254)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhcc-----------CC-
Confidence 456888766421 12223444568899999888777665543 111223444443222200 00
Q ss_pred cCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
+ .... |+.+|...+ +. .+ +++.+++|+.+-.+....... ..... ..+.. ..+
T Consensus 152 ---~--~~~~---Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~PG~v~t~~~~~~~~-~~~~~--~~~~~--~~~---- 213 (254)
T PRK07478 152 ---P--GMAA---YAASKAGLIGLTQVLAAEYGAQG-IRVNALLPGGTDTPMGRAMGD-TPEAL--AFVAG--LHA---- 213 (254)
T ss_pred ---C--Ccch---hHHHHHHHHHHHHHHHHHHhhcC-EEEEEEeeCcccCcccccccC-CHHHH--HHHHh--cCC----
Confidence 0 0122 666665443 11 13 899999999987632111100 00100 00100 011
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+..+..++++|.++++++..+... ..|+.+.+.++.
T Consensus 214 ---------~~~~~~~~~va~~~~~l~s~~~~~-~~G~~~~~dgg~ 249 (254)
T PRK07478 214 ---------LKRMAQPEEIAQAALFLASDAASF-VTGTALLVDGGV 249 (254)
T ss_pred ---------CCCCcCHHHHHHHHHHHcCchhcC-CCCCeEEeCCch
Confidence 112457889999999988654322 345777776654
No 169
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.54 E-value=8.7e-13 Score=111.27 Aligned_cols=214 Identities=16% Similarity=0.087 Sum_probs=126.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--ccCCCeEEEEecCCCHHHHHHHHhc-------cCce
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--IQSSSYCFISCDLLNPLDIKRKLTL-------LEDV 96 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~D~~~~~~l~~~~~~-------~~~V 96 (303)
+++++|+||||+|+||.+++++|+ +.|++|++++|++.... ....+..++++|+.+.+++++.++. +|.|
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 83 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLA-AEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIA 83 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 456899999999999999999999 68999999999865432 1112236788999999998887764 3568
Q ss_pred eEEeecccc------cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeeccc-ccccccCCCcccccCCcCcC
Q 042242 97 THIFWVTWA------SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMK-HYVSLQGLPEEKQVRFYDEE 167 (303)
Q Consensus 97 ~~~~~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~-~y~~~~~~~g~~~~~~~~e~ 167 (303)
+|+++.... ..+.....+.+++|+.++..+++.+... .....+++.+++.. .++..
T Consensus 84 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~--------------- 148 (255)
T PRK06057 84 FNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSA--------------- 148 (255)
T ss_pred EECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCC---------------
Confidence 888654321 1223344568899999998888776542 11122444443321 12110
Q ss_pred CCCCCCCccchHHHHHHH-----HH----Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCc
Q 042242 168 CPRVSKSNNFYYVLEDLL-----KE----KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGT 237 (303)
Q Consensus 168 ~~~~p~~~~~~y~~~k~~-----~e----~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 237 (303)
.+... |+.+|.. .. +. .+ +++++++|+.+.++....... ..... ..+... ..+
T Consensus 149 ---~~~~~---Y~~sKaal~~~~~~l~~~~~~~g-i~v~~i~pg~v~t~~~~~~~~--~~~~~---~~~~~~---~~~-- 211 (255)
T PRK06057 149 ---TSQIS---YTASKGGVLAMSRELGVQFARQG-IRVNALCPGPVNTPLLQELFA--KDPER---AARRLV---HVP-- 211 (255)
T ss_pred ---CCCcc---hHHHHHHHHHHHHHHHHHHHhhC-cEEEEEeeCCcCCchhhhhcc--CCHHH---HHHHHh---cCC--
Confidence 00122 6665532 21 22 23 999999999998753221100 00000 000000 011
Q ss_pred hhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 238 REIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 238 ~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
...+.+++++++++.+++...... ..|+.+.+.++
T Consensus 212 -------~~~~~~~~~~a~~~~~l~~~~~~~-~~g~~~~~~~g 246 (255)
T PRK06057 212 -------MGRFAEPEEIAAAVAFLASDDASF-ITASTFLVDGG 246 (255)
T ss_pred -------CCCCcCHHHHHHHHHHHhCccccC-ccCcEEEECCC
Confidence 113578899999988777654332 33567777655
No 170
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.54 E-value=1.3e-12 Score=109.45 Aligned_cols=210 Identities=14% Similarity=0.156 Sum_probs=123.4
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEe-cCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHhcc-------
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIA-RKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLTLL------- 93 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~-r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~~------- 93 (303)
++++||||+|+||++++++|+ +.|++|+++. |++.... . ...++.++.+|+.|.+++.++++.+
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i 80 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLA-QEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL 80 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence 689999999999999999999 6899988754 4433211 1 1235778999999999998887764
Q ss_pred CceeEEeecccc-----cCChHHHHHHHHHHHHHHHHHHHHHhhc-cC----CccEEEEeecccccccccCCCcccccCC
Q 042242 94 EDVTHIFWVTWA-----SQFASDMHKCCEQNKAMMCNALNAILPR-AK----ALKHVSLQTGMKHYVSLQGLPEEKQVRF 163 (303)
Q Consensus 94 ~~V~~~~~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~----~~~~~~~~s~~~~y~~~~~~~g~~~~~~ 163 (303)
|.|+|.++.... .....+....++.|+.++..+++++... .. .-.+++.+++...+.+. |
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~----------~ 150 (247)
T PRK09730 81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA----------P 150 (247)
T ss_pred CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC----------C
Confidence 458888664321 1123334457899999998888776543 11 11234554442222110 0
Q ss_pred cCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCcee
Q 042242 164 YDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 164 ~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
.. ..+ |+.+|...+ +. .+ ++++++||+.++++....... ... ...... ..|+.
T Consensus 151 ------~~-~~~---Y~~sK~~~~~~~~~l~~~~~~~~-i~v~~i~pg~~~~~~~~~~~~--~~~--~~~~~~--~~~~~ 213 (247)
T PRK09730 151 ------GE-YVD---YAASKGAIDTLTTGLSLEVAAQG-IRVNCVRPGFIYTEMHASGGE--PGR--VDRVKS--NIPMQ 213 (247)
T ss_pred ------Cc-ccc---hHhHHHHHHHHHHHHHHHHHHhC-eEEEEEEeCCCcCcccccCCC--HHH--HHHHHh--cCCCC
Confidence 00 012 454443322 11 23 999999999999964321110 110 111111 11211
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
-..+.+|+|.++++++..+... ..|+.|++.++
T Consensus 214 -------------~~~~~~dva~~~~~~~~~~~~~-~~g~~~~~~g~ 246 (247)
T PRK09730 214 -------------RGGQPEEVAQAIVWLLSDKASY-VTGSFIDLAGG 246 (247)
T ss_pred -------------CCcCHHHHHHHHHhhcChhhcC-ccCcEEecCCC
Confidence 1236788999998887654332 34577777664
No 171
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.54 E-value=3.3e-13 Score=112.79 Aligned_cols=156 Identities=19% Similarity=0.196 Sum_probs=102.9
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---ccCCCeEEEEecCCCHHHHHHHHhcc----CceeEEee
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---IQSSSYCFISCDLLNPLDIKRKLTLL----EDVTHIFW 101 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~D~~~~~~l~~~~~~~----~~V~~~~~ 101 (303)
++++||||+|+||++++++|+ ..|++|++++|++.... ....++.++++|++|.++++++++.. ++++|.++
T Consensus 2 ~~vlItGas~giG~~la~~L~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag 80 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYA-KQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAG 80 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHH-hCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCc
Confidence 689999999999999999999 68999999999865432 11246888999999999999998875 33555543
Q ss_pred cc-ccc---CChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccc
Q 042242 102 VT-WAS---QFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNF 177 (303)
Q Consensus 102 ~~-~~~---~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~ 177 (303)
.. ... .......+.+++|+.++.++++++.....+-.+++.+++.... + +. + ...+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~------~------~~----~--~~~~-- 140 (240)
T PRK06101 81 DCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASE------L------AL----P--RAEA-- 140 (240)
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhc------c------CC----C--CCch--
Confidence 22 111 2233344589999999999999988642111233333331111 0 00 0 0123
Q ss_pred hHHHHHHHHHH--------hcCC-cceEEecCCceeec
Q 042242 178 YYVLEDLLKEK--------LAGK-VAWSVHRPGLLLGS 206 (303)
Q Consensus 178 ~y~~~k~~~e~--------~~~~-~~~~ilRp~~v~G~ 206 (303)
|+.+|...+. .... ++++++||+.++++
T Consensus 141 -Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~ 177 (240)
T PRK06101 141 -YGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATP 177 (240)
T ss_pred -hhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCC
Confidence 6665554431 1222 99999999999884
No 172
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.54 E-value=1.5e-12 Score=108.49 Aligned_cols=208 Identities=12% Similarity=0.014 Sum_probs=125.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--ccCCCeEEEEecCCCHHHHHHHHhc-------cCcee
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--IQSSSYCFISCDLLNPLDIKRKLTL-------LEDVT 97 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~D~~~~~~l~~~~~~-------~~~V~ 97 (303)
|+|++|||||+|.||++++++|+ ..|++|++++|++.+.. ....+++++.+|+.|.+++.+.++. .|.++
T Consensus 1 ~~k~vlItGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv 79 (236)
T PRK06483 1 MPAPILITGAGQRIGLALAWHLL-AQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAII 79 (236)
T ss_pred CCceEEEECCCChHHHHHHHHHH-HCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEE
Confidence 56899999999999999999999 68999999999875422 1223577889999999888776654 45578
Q ss_pred EEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc--CC--ccEEEEeecccccccccCCCcccccCCcCcCCC
Q 042242 98 HIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA--KA--LKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECP 169 (303)
Q Consensus 98 ~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~--~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~ 169 (303)
|.++.... .....+..+.+++|+.++..+...+.... .. ...++.+++.... .+. +
T Consensus 80 ~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~------------~~~----~ 143 (236)
T PRK06483 80 HNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVE------------KGS----D 143 (236)
T ss_pred ECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhc------------cCC----C
Confidence 87654211 11234445688999999888777766541 11 1234443321110 000 0
Q ss_pred CCCCCccchHHHHHHHHH---------HhcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhh
Q 042242 170 RVSKSNNFYYVLEDLLKE---------KLAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREI 240 (303)
Q Consensus 170 ~~p~~~~~~y~~~k~~~e---------~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 240 (303)
. ... |+.+|...+ +..+ +++..++|+.+.-.. ... .... ..... ..++.
T Consensus 144 ~--~~~---Y~asKaal~~l~~~~a~e~~~~-irvn~v~Pg~~~~~~-~~~----~~~~--~~~~~--~~~~~------- 201 (236)
T PRK06483 144 K--HIA---YAASKAALDNMTLSFAAKLAPE-VKVNSIAPALILFNE-GDD----AAYR--QKALA--KSLLK------- 201 (236)
T ss_pred C--Ccc---HHHHHHHHHHHHHHHHHHHCCC-cEEEEEccCceecCC-CCC----HHHH--HHHhc--cCccc-------
Confidence 0 122 777666554 2223 899999999885321 111 0100 00110 11211
Q ss_pred hhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 241 WEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 241 ~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
-....+|+|.++.+++.... ..|+.+.+.++..
T Consensus 202 ------~~~~~~~va~~~~~l~~~~~---~~G~~i~vdgg~~ 234 (236)
T PRK06483 202 ------IEPGEEEIIDLVDYLLTSCY---VTGRSLPVDGGRH 234 (236)
T ss_pred ------cCCCHHHHHHHHHHHhcCCC---cCCcEEEeCcccc
Confidence 13467889999988886433 3458887877643
No 173
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.54 E-value=6.8e-13 Score=113.10 Aligned_cols=189 Identities=15% Similarity=0.076 Sum_probs=118.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---ccCCCeEEEEecCCCHHHHHHHHhc-------cCce
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---IQSSSYCFISCDLLNPLDIKRKLTL-------LEDV 96 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~D~~~~~~l~~~~~~-------~~~V 96 (303)
++++|+||||||.||+.+++.|+ +.|++|++++|++.+.. .....+.++.+|+.|++++.++++. +|.+
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 82 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALA-ALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVL 82 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 46799999999999999999999 68999999999875432 1112478899999999987776654 3457
Q ss_pred eEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCCC
Q 042242 97 THIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPR 170 (303)
Q Consensus 97 ~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~ 170 (303)
+|.++.... ........+.+++|+.++..+++.+... ..+..+++.+|+...+.+. +
T Consensus 83 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~- 145 (273)
T PRK07825 83 VNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPV----------------P- 145 (273)
T ss_pred EECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCC----------------C-
Confidence 777654321 2233344568899999998888877654 1223355555442222100 0
Q ss_pred CCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhh
Q 042242 171 VSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIW 241 (303)
Q Consensus 171 ~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 241 (303)
.... |..+|...+ ..... +++++++|+.+-.+... +.+ +
T Consensus 146 -~~~~---Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~-------------------~~~----~----- 193 (273)
T PRK07825 146 -GMAT---YCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIA-------------------GTG----G----- 193 (273)
T ss_pred -CCcc---hHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhc-------------------ccc----c-----
Confidence 0122 555554222 11122 99999999887542100 000 0
Q ss_pred hhhcccCccHHHHHHHHHHHhcCcC
Q 042242 242 EEYCLDGSDSRLVAEQHIWVATNDD 266 (303)
Q Consensus 242 ~~~~~~~~~~~d~a~a~~~~~~~~~ 266 (303)
.....+++++++|+.++.++.++.
T Consensus 194 -~~~~~~~~~~~va~~~~~~l~~~~ 217 (273)
T PRK07825 194 -AKGFKNVEPEDVAAAIVGTVAKPR 217 (273)
T ss_pred -ccCCCCCCHHHHHHHHHHHHhCCC
Confidence 011125688999999998887654
No 174
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.54 E-value=2.1e-12 Score=108.75 Aligned_cols=213 Identities=13% Similarity=0.069 Sum_probs=128.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
+++|+|+||||+|+||.+++++|+ +.|++|++++|++.... . ....+.++++|+.+.+++.++++.
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~-~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLA-QQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHG 84 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 456899999999999999999999 68999999999765421 0 123467889999999888776654
Q ss_pred -cCceeEEeeccc-----ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCc
Q 042242 93 -LEDVTHIFWVTW-----ASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 93 -~~~V~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
+|.++|.++... ...........++.|+.++..+++++.+. .....+++.+++...+ .+.
T Consensus 85 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~------------~~~ 152 (252)
T PRK07035 85 RLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGV------------SPG 152 (252)
T ss_pred CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhc------------CCC
Confidence 455777765321 12233444458899999999888887554 1223344444432111 000
Q ss_pred CcCCCCCCCCccchHHHHHHHHH-----H----h-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE-----K----L-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e-----~----~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
.+..+ |+.+|...+ + . .+ ++++.+.|+.+..+...... .....+..... ..|
T Consensus 153 ------~~~~~---Y~~sK~al~~~~~~l~~e~~~~g-i~v~~i~PG~v~t~~~~~~~---~~~~~~~~~~~--~~~--- 214 (252)
T PRK07035 153 ------DFQGI---YSITKAAVISMTKAFAKECAPFG-IRVNALLPGLTDTKFASALF---KNDAILKQALA--HIP--- 214 (252)
T ss_pred ------CCCcc---hHHHHHHHHHHHHHHHHHHhhcC-EEEEEEeeccccCccccccc---CCHHHHHHHHc--cCC---
Confidence 01223 666655544 1 1 23 99999999888653211110 00001111110 111
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
...+.+.+++|+++++++...... ..|+.+++.++
T Consensus 215 ----------~~~~~~~~~va~~~~~l~~~~~~~-~~g~~~~~dgg 249 (252)
T PRK07035 215 ----------LRRHAEPSEMAGAVLYLASDASSY-TTGECLNVDGG 249 (252)
T ss_pred ----------CCCcCCHHHHHHHHHHHhCccccC-ccCCEEEeCCC
Confidence 112457789999998887655332 34577777655
No 175
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.53 E-value=2.3e-12 Score=108.60 Aligned_cols=215 Identities=12% Similarity=0.032 Sum_probs=128.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc-c-----c--cCCCeEEEEecCCCHHHHHHHHhc-----
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT-A-----I--QSSSYCFISCDLLNPLDIKRKLTL----- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-~-----~--~~~~~~~~~~D~~~~~~l~~~~~~----- 92 (303)
+.+|+++||||+|+||++++++|+ +.|++|++++|+.+.. . . ...++.++.+|+.|.+++.++++.
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~-~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 84 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLA-QAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAEL 84 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 346899999999999999999999 6899999999976432 1 1 123577889999999988877765
Q ss_pred --cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCc
Q 042242 93 --LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 93 --~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
.|.++|+++.... .....+..+.+++|+.++..+++++... ..+..+++.+++...+.+. +
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~- 153 (254)
T PRK06114 85 GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVN----------R- 153 (254)
T ss_pred CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCC----------C-
Confidence 3568888664321 1223444568899999998888876543 1122244444432121100 0
Q ss_pred CcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
..+... |..+|...+ .. .+ +++.+++|+.+.++..... .. .. ......+ ..|
T Consensus 154 -----~~~~~~---Y~~sKaa~~~l~~~la~e~~~~g-i~v~~v~PG~i~t~~~~~~-~~-~~--~~~~~~~--~~p--- 215 (254)
T PRK06114 154 -----GLLQAH---YNASKAGVIHLSKSLAMEWVGRG-IRVNSISPGYTATPMNTRP-EM-VH--QTKLFEE--QTP--- 215 (254)
T ss_pred -----CCCcch---HHHHHHHHHHHHHHHHHHHhhcC-eEEEEEeecCccCcccccc-cc-hH--HHHHHHh--cCC---
Confidence 000122 666555322 11 23 9999999999977422111 00 00 0001111 112
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+..+.+++|+|.++++++..... ...|+++.+.++.
T Consensus 216 ----------~~r~~~~~dva~~~~~l~s~~~~-~~tG~~i~~dgg~ 251 (254)
T PRK06114 216 ----------MQRMAKVDEMVGPAVFLLSDAAS-FCTGVDLLVDGGF 251 (254)
T ss_pred ----------CCCCcCHHHHHHHHHHHcCcccc-CcCCceEEECcCE
Confidence 11255788999999988754332 2456778777653
No 176
>PRK06196 oxidoreductase; Provisional
Probab=99.53 E-value=2.3e-13 Score=118.44 Aligned_cols=172 Identities=16% Similarity=0.070 Sum_probs=106.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc---cCCCeEEEEecCCCHHHHHHHHhc-------cCc
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI---QSSSYCFISCDLLNPLDIKRKLTL-------LED 95 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~l~~~~~~-------~~~ 95 (303)
+++|+|+||||+|+||++++++|+ ..|++|++++|++.+... ...++.++.+|++|.++++++++. +|.
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~-~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~ 102 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALA-QAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDI 102 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCE
Confidence 356899999999999999999999 689999999998654321 123478899999999988777653 456
Q ss_pred eeEEeeccccc--CChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCCCCC
Q 042242 96 VTHIFWVTWAS--QFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRV 171 (303)
Q Consensus 96 V~~~~~~~~~~--~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~ 171 (303)
++|.++..... .........+++|+.++..+++.+... .....+++.+|+...+... .+..+.....
T Consensus 103 li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~---------~~~~~~~~~~ 173 (315)
T PRK06196 103 LINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSP---------IRWDDPHFTR 173 (315)
T ss_pred EEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCC---------CCccccCccC
Confidence 88887643211 112223347899999977777765543 1112345555443222111 0011100001
Q ss_pred CCCccchHHHHHHHHHH--------hcCC-cceEEecCCceeecC
Q 042242 172 SKSNNFYYVLEDLLKEK--------LAGK-VAWSVHRPGLLLGSS 207 (303)
Q Consensus 172 p~~~~~~y~~~k~~~e~--------~~~~-~~~~ilRp~~v~G~~ 207 (303)
+..+...|+.+|...+. .... +++++++||.+.++.
T Consensus 174 ~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~ 218 (315)
T PRK06196 174 GYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPL 218 (315)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCc
Confidence 11112237877775541 1223 999999999999853
No 177
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.53 E-value=2.8e-12 Score=108.18 Aligned_cols=216 Identities=14% Similarity=0.121 Sum_probs=130.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
+++|+|+||||+|+||++++++|+ ..|++|++++|+..... . ...++.++.+|++|.+++.++++.
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~-~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 87 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFA-TAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLG 87 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHH-HCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 357899999999999999999999 68999999998765421 0 123577889999999988776654
Q ss_pred -cCceeEEeecccc---cCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCCcCc
Q 042242 93 -LEDVTHIFWVTWA---SQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 93 -~~~V~~~~~~~~~---~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
.|.++|+++.... ........+.+++|+.++.++++++.... ....+++.+++...+.
T Consensus 88 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~---------------- 151 (255)
T PRK06113 88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN---------------- 151 (255)
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccC----------------
Confidence 3568888664221 22334444578999999999999987531 1112344443321110
Q ss_pred CCCCCCCCccchHHHHHHHHH-----Hh---cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCc
Q 042242 167 ECPRVSKSNNFYYVLEDLLKE-----KL---AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGT 237 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~e-----~~---~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 237 (303)
+..+..+ |+.+|...+ .. ... +++.++.|+.+..+..... .... ......+ ..+
T Consensus 152 --~~~~~~~---Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~---~~~~-~~~~~~~--~~~------ 214 (255)
T PRK06113 152 --KNINMTS---YASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV---ITPE-IEQKMLQ--HTP------ 214 (255)
T ss_pred --CCCCcch---hHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccc---cCHH-HHHHHHh--cCC------
Confidence 0001122 666555443 11 112 8899999998876321110 0010 0001111 111
Q ss_pred hhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCc
Q 042242 238 REIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPRF 283 (303)
Q Consensus 238 ~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~ 283 (303)
+..+..++|++.++++++..... ...|+.+++.++...
T Consensus 215 -------~~~~~~~~d~a~~~~~l~~~~~~-~~~G~~i~~~gg~~~ 252 (255)
T PRK06113 215 -------IRRLGQPQDIANAALFLCSPAAS-WVSGQILTVSGGGVQ 252 (255)
T ss_pred -------CCCCcCHHHHHHHHHHHcCcccc-CccCCEEEECCCccc
Confidence 11245778899999988754422 245688999887543
No 178
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.53 E-value=1.5e-12 Score=109.67 Aligned_cols=215 Identities=14% Similarity=0.085 Sum_probs=129.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHhcc------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLTLL------ 93 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~~~------ 93 (303)
.+|+|+||||+|+||++++++|+ +.|++|++++|++.+.. ....++.++.+|+.|.+++.++++.+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 84 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFA-REGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR 84 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 46899999999999999999999 68999999999865421 11235788999999999888877654
Q ss_pred -CceeEEeeccc-----ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 94 -EDVTHIFWVTW-----ASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 94 -~~V~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
|.|+|.++... ......+..+.+++|+.++..+++++... .....+++..++...+... .
T Consensus 85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~------------~ 152 (253)
T PRK06172 85 LDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAA------------P 152 (253)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC------------C
Confidence 66888866432 12234455567899999998777765432 1112344554443222110 0
Q ss_pred cCCCCCCCCccchHHHHHHHHH-----H---hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE-----K---LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGG 236 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e-----~---~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 236 (303)
.... |+.+|...+ + .... +++..+.|+.+-.+............ ...... ..|
T Consensus 153 ------~~~~---Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~--~~~~~~--~~~----- 214 (253)
T PRK06172 153 ------KMSI---YAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRK--AEFAAA--MHP----- 214 (253)
T ss_pred ------CCch---hHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHH--HHHHhc--cCC-----
Confidence 0122 665555333 1 1122 99999999988653211100000000 000000 111
Q ss_pred chhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 237 TREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
...+.+.++++..+++++...... ..|+.+++.++.
T Consensus 215 --------~~~~~~p~~ia~~~~~l~~~~~~~-~~G~~i~~dgg~ 250 (253)
T PRK06172 215 --------VGRIGKVEEVASAVLYLCSDGASF-TTGHALMVDGGA 250 (253)
T ss_pred --------CCCccCHHHHHHHHHHHhCccccC-cCCcEEEECCCc
Confidence 112557899999999988765332 446788887764
No 179
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.53 E-value=1.4e-12 Score=109.77 Aligned_cols=208 Identities=12% Similarity=0.082 Sum_probs=126.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHhc-------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLTL------- 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~~------- 92 (303)
.+++++|||++|+||..+++.|+ +.|++|++++|++.+.. ....++..+++|+.+.+++.++++.
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~-~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLA-QKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999 68999999999865421 1123577889999999887776654
Q ss_pred cCceeEEeeccc-------------ccCChHHHHHHHHHHHHHHHHHHHHHhhcc---CCccEEEEeecccccccccCCC
Q 042242 93 LEDVTHIFWVTW-------------ASQFASDMHKCCEQNKAMMCNALNAILPRA---KALKHVSLQTGMKHYVSLQGLP 156 (303)
Q Consensus 93 ~~~V~~~~~~~~-------------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~---~~~~~~~~~s~~~~y~~~~~~~ 156 (303)
.|.|+|+++... ...+.......++.|+.++..+..++.... ..-..++.+++...|+..
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~---- 158 (253)
T PRK08217 83 LNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNM---- 158 (253)
T ss_pred CCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCC----
Confidence 356888865422 111233444578899999987776555431 111233333332222110
Q ss_pred cccccCCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhh
Q 042242 157 EEKQVRFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCK 226 (303)
Q Consensus 157 g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~ 226 (303)
+..+ |+.+|...+ .. .+ ++++.++|+.+.++..... ..... .....
T Consensus 159 ---------------~~~~---Y~~sK~a~~~l~~~la~~~~~~~-i~v~~v~pg~v~t~~~~~~---~~~~~--~~~~~ 214 (253)
T PRK08217 159 ---------------GQTN---YSASKAGVAAMTVTWAKELARYG-IRVAAIAPGVIETEMTAAM---KPEAL--ERLEK 214 (253)
T ss_pred ---------------CCch---hHHHHHHHHHHHHHHHHHHHHcC-cEEEEEeeCCCcCcccccc---CHHHH--HHHHh
Confidence 1223 666654333 11 23 9999999999987432111 01110 00100
Q ss_pred hCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 227 HLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 227 ~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
..+ +..+.+++++|+++.+++.... ..|++|++.++.
T Consensus 215 --~~~-------------~~~~~~~~~~a~~~~~l~~~~~---~~g~~~~~~gg~ 251 (253)
T PRK08217 215 --MIP-------------VGRLGEPEEIAHTVRFIIENDY---VTGRVLEIDGGL 251 (253)
T ss_pred --cCC-------------cCCCcCHHHHHHHHHHHHcCCC---cCCcEEEeCCCc
Confidence 111 1124577899999999886543 345899998864
No 180
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.53 E-value=2.6e-12 Score=109.29 Aligned_cols=156 Identities=15% Similarity=0.120 Sum_probs=101.8
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHh-------ccC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLT-------LLE 94 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~-------~~~ 94 (303)
|+|+||||+|+||+.++++|+ +.|++|++++|+..+.. ....++.++++|+.|.+++.++++ ..|
T Consensus 1 ~~vlVtGasggIG~~la~~l~-~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 79 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWA-REGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGID 79 (270)
T ss_pred CEEEEecCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 479999999999999999999 68999999999865422 113467889999999998877775 356
Q ss_pred ceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcCC
Q 042242 95 DVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC 168 (303)
Q Consensus 95 ~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~ 168 (303)
.++|.++.... .....+..+.+++|+.++..+.+.+... .....+++.+++...+... .
T Consensus 80 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------~--- 144 (270)
T PRK05650 80 VIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQG------------P--- 144 (270)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCC------------C---
Confidence 68888665322 1223344457889988888777765433 1123355555443222110 0
Q ss_pred CCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeec
Q 042242 169 PRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGS 206 (303)
Q Consensus 169 ~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~ 206 (303)
.... |+.+|...+ ..... +++++++|+.+..+
T Consensus 145 ---~~~~---Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~ 185 (270)
T PRK05650 145 ---AMSS---YNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTN 185 (270)
T ss_pred ---CchH---HHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccC
Confidence 0122 666555322 11122 89999999999874
No 181
>PRK09242 tropinone reductase; Provisional
Probab=99.53 E-value=1.9e-12 Score=109.27 Aligned_cols=213 Identities=14% Similarity=0.074 Sum_probs=128.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--c--CCCeEEEEecCCCHHHHHHHHhc----
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--Q--SSSYCFISCDLLNPLDIKRKLTL---- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~--~~~~~~~~~D~~~~~~l~~~~~~---- 92 (303)
+.+|+++||||+|.||+.+++.|. +.|++|++++|+.+... . . ..++.++.+|+.+.+++.++++.
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~-~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFL-GLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH 85 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 356899999999999999999999 68999999999865421 0 1 23577889999999887666653
Q ss_pred ---cCceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCC
Q 042242 93 ---LEDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRF 163 (303)
Q Consensus 93 ---~~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~ 163 (303)
+|.|+|+++... ......+....+.+|+.++..+++++... .....+++.+++...+...
T Consensus 86 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~----------- 154 (257)
T PRK09242 86 WDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHV----------- 154 (257)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCC-----------
Confidence 455888876421 12234455568899999999998887653 1122344454442222110
Q ss_pred cCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCcee
Q 042242 164 YDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 164 ~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
. +... |+.+|...+ .. .+ ++++.++|+.+.++........ .. ....... ..|
T Consensus 155 -~------~~~~---Y~~sK~a~~~~~~~la~e~~~~~-i~v~~i~Pg~i~t~~~~~~~~~-~~--~~~~~~~--~~~-- 216 (257)
T PRK09242 155 -R------SGAP---YGMTKAALLQMTRNLAVEWAEDG-IRVNAVAPWYIRTPLTSGPLSD-PD--YYEQVIE--RTP-- 216 (257)
T ss_pred -C------CCcc---hHHHHHHHHHHHHHHHHHHHHhC-eEEEEEEECCCCCcccccccCC-hH--HHHHHHh--cCC--
Confidence 0 0122 555443332 11 23 9999999999987532211110 00 0000000 111
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
+..+.+.++++.++.+++...... ..|+.+.+.++
T Consensus 217 -----------~~~~~~~~~va~~~~~l~~~~~~~-~~g~~i~~~gg 251 (257)
T PRK09242 217 -----------MRRVGEPEEVAAAVAFLCMPAASY-ITGQCIAVDGG 251 (257)
T ss_pred -----------CCCCcCHHHHHHHHHHHhCccccc-ccCCEEEECCC
Confidence 122457788899988887543221 23577777654
No 182
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.53 E-value=4.2e-13 Score=113.55 Aligned_cols=104 Identities=13% Similarity=0.086 Sum_probs=80.5
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----ccCCCeEEEEecCCCHHHHHHHHhcc--------Cc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----IQSSSYCFISCDLLNPLDIKRKLTLL--------ED 95 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~D~~~~~~l~~~~~~~--------~~ 95 (303)
|+++||||+|+||+.++++|+ +.|++|++++|++.... ....+++++++|+.|.+++.+.++.+ |.
T Consensus 2 k~vlItGasg~iG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFA-AEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHH-HCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 689999999999999999999 68999999999876432 11246889999999999888776543 56
Q ss_pred eeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 96 VTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 96 V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
|+|+++.... ..+..+..+.+++|+.++..+++++...
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 122 (260)
T PRK08267 81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPY 122 (260)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 8888765321 2233445568999999999999888653
No 183
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.52 E-value=2.7e-12 Score=108.12 Aligned_cols=214 Identities=11% Similarity=0.046 Sum_probs=127.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHhc-------c
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLTL-------L 93 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~-------~ 93 (303)
+|+++||||+|.||+++++.|+ +.|++|++++|+..... . ...++.++++|++|+++++++++. .
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~-~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFA-EEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 3789999999999999999999 68999999999865432 1 124678899999999988776654 4
Q ss_pred CceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhc--c-CCccEEEEeecccccccccCCCcccccCCcCc
Q 042242 94 EDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPR--A-KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 94 ~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~-~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
|.++|+++... ...+.....+.+++|+.++.++++++.+. . ....+++.+++...+...
T Consensus 80 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~-------------- 145 (252)
T PRK07677 80 DALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAG-------------- 145 (252)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCC--------------
Confidence 55888865422 12234444568999999999999998653 1 112345555442111000
Q ss_pred CCCCCCCCccchHHHHHHHHH---------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCC
Q 042242 167 ECPRVSKSNNFYYVLEDLLKE---------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGG 236 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~e---------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 236 (303)
+. ..+ |+.+|...+ +.... +++..++||.+.+... .......-.....+.+ ..+
T Consensus 146 --~~--~~~---Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~--~~~~~~~~~~~~~~~~--~~~----- 209 (252)
T PRK07677 146 --PG--VIH---SAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGG--ADKLWESEEAAKRTIQ--SVP----- 209 (252)
T ss_pred --CC--Ccc---hHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccc--cccccCCHHHHHHHhc--cCC-----
Confidence 00 112 454443322 22222 9999999999985211 1000000000011111 111
Q ss_pred chhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 237 TREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+..+.+.+|+|.++.+++..... ...|+.+.+.++.
T Consensus 210 --------~~~~~~~~~va~~~~~l~~~~~~-~~~g~~~~~~gg~ 245 (252)
T PRK07677 210 --------LGRLGTPEEIAGLAYFLLSDEAA-YINGTCITMDGGQ 245 (252)
T ss_pred --------CCCCCCHHHHHHHHHHHcCcccc-ccCCCEEEECCCe
Confidence 11255778889888887654322 1445777777654
No 184
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.52 E-value=2.9e-12 Score=108.11 Aligned_cols=213 Identities=12% Similarity=0.064 Sum_probs=127.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHhcc-----
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLTLL----- 93 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~~~----- 93 (303)
..+|+|+||||+|+||++++++|+ +.|++|++++|++.... ....++.++.+|+.+.+++.++++.+
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 87 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALA-GAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHG 87 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-HcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 457899999999999999999999 68999999999865421 11235788999999999888777643
Q ss_pred --CceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 94 --EDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 94 --~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
|.++|.++.... .....+..+.+++|+.++..+.+.+.+. .....+++.+++...+.. ..
T Consensus 88 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~------------~~ 155 (256)
T PRK06124 88 RLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVA------------RA 155 (256)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccC------------CC
Confidence 457777654321 2223344457899999999998777653 112233444333211100 00
Q ss_pred cCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
. ..+ |+.+|...+ .. .+ +++..++|+.+.++....... ..... ..+.+ ..+
T Consensus 156 ~------~~~---Y~~sK~a~~~~~~~la~e~~~~~-i~v~~i~pg~v~t~~~~~~~~-~~~~~--~~~~~--~~~---- 216 (256)
T PRK06124 156 G------DAV---YPAAKQGLTGLMRALAAEFGPHG-ITSNAIAPGYFATETNAAMAA-DPAVG--PWLAQ--RTP---- 216 (256)
T ss_pred C------ccH---hHHHHHHHHHHHHHHHHHHHHhC-cEEEEEEECCccCcchhhhcc-ChHHH--HHHHh--cCC----
Confidence 0 112 444433322 22 23 999999999999853111100 00100 00111 111
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
...+.++++++.++++++..+... ..|+.+.+.++
T Consensus 217 ---------~~~~~~~~~~a~~~~~l~~~~~~~-~~G~~i~~dgg 251 (256)
T PRK06124 217 ---------LGRWGRPEEIAGAAVFLASPAASY-VNGHVLAVDGG 251 (256)
T ss_pred ---------CCCCCCHHHHHHHHHHHcCcccCC-cCCCEEEECCC
Confidence 112567889999999988765322 34566666554
No 185
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.52 E-value=3.6e-13 Score=114.89 Aligned_cols=104 Identities=19% Similarity=0.234 Sum_probs=80.1
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhc-------cCceeEEe
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTL-------LEDVTHIF 100 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~-------~~~V~~~~ 100 (303)
|+++||||+|+||++++++|+ ..|++|++++|+..+.. ....+++++.+|+.+.+++.++++. +|.|+|.+
T Consensus 2 k~vlItGasggiG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFK-AAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CEEEEecCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 689999999999999999998 68999999999865432 2224577889999999988777653 46688887
Q ss_pred eccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 101 WVTW----ASQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 101 ~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
+... ...+..+..+.+++|+.++..+++++...
T Consensus 81 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 117 (274)
T PRK05693 81 GYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPL 117 (274)
T ss_pred CCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 6432 22234455568899999999999887653
No 186
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.51 E-value=2.4e-12 Score=109.15 Aligned_cols=215 Identities=13% Similarity=0.100 Sum_probs=127.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
.++++++||||+|+||+++++.|+ ..|++|++++|++.... . ...++.++.+|+++.+++.++++.
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~ 85 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFA-RAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFG 85 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 346899999999999999999999 68999999999865421 1 123567889999999988887765
Q ss_pred -cCceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhcc-CCccEEEEeecccccccccCCCcccccCCcCc
Q 042242 93 -LEDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPRA-KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 93 -~~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
+|.++|+++... ...+..+..+.+++|+.++.++++++.... .+-.+++.+++...+. +.
T Consensus 86 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~------------~~-- 151 (264)
T PRK07576 86 PIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFV------------PM-- 151 (264)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhcc------------CC--
Confidence 355778764321 222334444578899999999999887541 1112444444321110 00
Q ss_pred CCCCCCCCccchHHHHHHHHH-----H----h-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCC
Q 042242 167 ECPRVSKSNNFYYVLEDLLKE-----K----L-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGG 236 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~e-----~----~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 236 (303)
+. ... |..+|...+ . . .+ ++++.++|+.+.+... .. ...... .+..... ...|
T Consensus 152 --~~--~~~---Y~asK~a~~~l~~~la~e~~~~g-i~v~~v~pg~~~~t~~-~~-~~~~~~-~~~~~~~-~~~~----- 214 (264)
T PRK07576 152 --PM--QAH---VCAAKAGVDMLTRTLALEWGPEG-IRVNSIVPGPIAGTEG-MA-RLAPSP-ELQAAVA-QSVP----- 214 (264)
T ss_pred --CC--ccH---HHHHHHHHHHHHHHHHHHhhhcC-eEEEEEecccccCcHH-Hh-hcccCH-HHHHHHH-hcCC-----
Confidence 00 122 666554433 1 1 23 8999999998875210 00 000000 0000000 0111
Q ss_pred chhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 237 TREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+....+.+|+|..+++++..+... ..|..+.+.++.
T Consensus 215 --------~~~~~~~~dva~~~~~l~~~~~~~-~~G~~~~~~gg~ 250 (264)
T PRK07576 215 --------LKRNGTKQDIANAALFLASDMASY-ITGVVLPVDGGW 250 (264)
T ss_pred --------CCCCCCHHHHHHHHHHHcChhhcC-ccCCEEEECCCc
Confidence 112456789999999888654321 345666666653
No 187
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.51 E-value=1.9e-12 Score=108.68 Aligned_cols=158 Identities=14% Similarity=0.075 Sum_probs=102.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------c--cCCCeEEEEecCCCHHHHHHHHhc-----
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------I--QSSSYCFISCDLLNPLDIKRKLTL----- 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~--~~~~~~~~~~D~~~~~~l~~~~~~----- 92 (303)
|+++++||||+|+||++++++|+ +.|++|++++|++.... . ...+++++++|++|.+++.++++.
T Consensus 1 ~~k~vlItGas~giG~~la~~l~-~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK08251 1 TRQKILITGASSGLGAGMAREFA-AKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDEL 79 (248)
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46799999999999999999999 67899999999875432 0 123578899999999988776653
Q ss_pred --cCceeEEeeccccc----CChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCc
Q 042242 93 --LEDVTHIFWVTWAS----QFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 93 --~~~V~~~~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
+|.++|.++..... .......+.+++|+.+...+++++... ..+..+++.+++...+.+. +
T Consensus 80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~- 148 (248)
T PRK08251 80 GGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGL----------P- 148 (248)
T ss_pred CCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCC----------C-
Confidence 45577776543221 123334457899999999888887543 1123344444432121000 0
Q ss_pred CcCCCCCCCCccchHHHHHHHHH-----Hh---cCC-cceEEecCCceee
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE-----KL---AGK-VAWSVHRPGLLLG 205 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e-----~~---~~~-~~~~ilRp~~v~G 205 (303)
.+... |+.+|...+ +. ... +++++++|+.+.+
T Consensus 149 ------~~~~~---Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t 189 (248)
T PRK08251 149 ------GVKAA---YAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRS 189 (248)
T ss_pred ------CCccc---HHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcc
Confidence 00123 676665433 11 122 8999999998876
No 188
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.51 E-value=1.8e-12 Score=113.55 Aligned_cols=195 Identities=17% Similarity=0.134 Sum_probs=120.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHh-------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
+.+++|+||||+|+||++++++|+ +.|++|++++|++.... . ...++.++.+|++|.++++++++
T Consensus 6 l~~k~vlITGas~gIG~~la~~la-~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g 84 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFA-RRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELG 84 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence 346899999999999999999999 68999999999865432 1 12357788999999998887765
Q ss_pred ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCCcC
Q 042242 92 LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 92 ~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
.+|.++|.++.... .....+....+++|+.+...+...+.... ....+++.+++...|...
T Consensus 85 ~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~------------- 151 (334)
T PRK07109 85 PIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSI------------- 151 (334)
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCC-------------
Confidence 35667887654321 22334445678899888777666655431 112344444443233110
Q ss_pred cCCCCCCCCccchHHHHHHHHH---------Hhc-CC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE---------KLA-GK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e---------~~~-~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
+. ..+ |..+|...+ ... +. +++++++|+.+..+..... .. ... ..+
T Consensus 152 ---~~--~~~---Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~----~~-----~~~---~~~--- 208 (334)
T PRK07109 152 ---PL--QSA---YCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWA----RS-----RLP---VEP--- 208 (334)
T ss_pred ---Cc--chH---HHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhh----hh-----hcc---ccc---
Confidence 00 223 666665432 222 23 9999999998876311100 00 000 000
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCc
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATND 265 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~ 265 (303)
.....+.+.+++|+++++++.++
T Consensus 209 --------~~~~~~~~pe~vA~~i~~~~~~~ 231 (334)
T PRK07109 209 --------QPVPPIYQPEVVADAILYAAEHP 231 (334)
T ss_pred --------cCCCCCCCHHHHHHHHHHHHhCC
Confidence 11122568899999999998775
No 189
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.51 E-value=3.2e-12 Score=109.24 Aligned_cols=216 Identities=15% Similarity=0.138 Sum_probs=126.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHh-------c
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLT-------L 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~-------~ 92 (303)
.+|+++||||+|+||++++++|+ +.|++|++++|+..... . ...++.++++|+.|.+++..+++ .
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 87 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELA-RAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP 87 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999 68999999999864321 1 12357788999999988877665 3
Q ss_pred cCceeEEeecccc-------------------cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeeccccccc
Q 042242 93 LEDVTHIFWVTWA-------------------SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVS 151 (303)
Q Consensus 93 ~~~V~~~~~~~~~-------------------~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~ 151 (303)
+|.++|+++.... .....+..+.+++|+.++..++.++... ..+..+++.+++...|..
T Consensus 88 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~ 167 (278)
T PRK08277 88 CDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTP 167 (278)
T ss_pred CCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCC
Confidence 5668888663221 1123344557899999988776665543 111234444443222211
Q ss_pred ccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHH-----H---hcCC-cceEEecCCceeecCCCCccchh-hHHHHH
Q 042242 152 LQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE-----K---LAGK-VAWSVHRPGLLLGSSHRSLYNFL-GCLCVY 221 (303)
Q Consensus 152 ~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e-----~---~~~~-~~~~ilRp~~v~G~~~~~~~~~~-~~~~~~ 221 (303)
. .+... |+.+|...+ + .... +++..++|+.+..+......... ......
T Consensus 168 ------------~------~~~~~---Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~ 226 (278)
T PRK08277 168 ------------L------TKVPA---YSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTER 226 (278)
T ss_pred ------------C------CCCch---hHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhH
Confidence 0 00122 666555433 1 1122 99999999999885321100000 000000
Q ss_pred -HHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcC-cCCcCCCCceEEeecC
Q 042242 222 -GAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATN-DDISSTKGQAFNAING 280 (303)
Q Consensus 222 -~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~-~~~~~~~g~~yni~~~ 280 (303)
..+.. ..| ...+.+.+|+|.++++++.. ... ...|+.+.+.++
T Consensus 227 ~~~~~~--~~p-------------~~r~~~~~dva~~~~~l~s~~~~~-~~tG~~i~vdgG 271 (278)
T PRK08277 227 ANKILA--HTP-------------MGRFGKPEELLGTLLWLADEKASS-FVTGVVLPVDGG 271 (278)
T ss_pred HHHHhc--cCC-------------ccCCCCHHHHHHHHHHHcCccccC-CcCCCEEEECCC
Confidence 00000 111 11255788999999998765 322 234577777666
No 190
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.51 E-value=2e-12 Score=109.28 Aligned_cols=219 Identities=13% Similarity=0.054 Sum_probs=131.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCe-EEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHhc-----
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWK-VYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLTL----- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~----- 92 (303)
+++|+|+||||+|+||+.++++|+ ..|++ |++++|++.+.. . ...++.++.+|+.+.+++.++++.
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~-~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFA-ERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF 82 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHH-HCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 456899999999999999999999 68899 999999764322 1 123567789999999988877764
Q ss_pred --cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc-C--CccEEEEeecccccccccCCCcccccCC
Q 042242 93 --LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA-K--ALKHVSLQTGMKHYVSLQGLPEEKQVRF 163 (303)
Q Consensus 93 --~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~--~~~~~~~~s~~~~y~~~~~~~g~~~~~~ 163 (303)
+|.++|+++.... ..........++.|+.++.++++++.+.. . ...+++.+++...|++.
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~----------- 151 (260)
T PRK06198 83 GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ----------- 151 (260)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC-----------
Confidence 4668888765321 22333344578999999999988886541 1 12345554443233111
Q ss_pred cCcCCCCCCCCccchHHHHHHHHH-----Hh---cCC-cceEEecCCceeecCCCCc-cchhhHHHHHHHHhhhCCCcee
Q 042242 164 YDEECPRVSKSNNFYYVLEDLLKE-----KL---AGK-VAWSVHRPGLLLGSSHRSL-YNFLGCLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 164 ~~e~~~~~p~~~~~~y~~~k~~~e-----~~---~~~-~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
+. ..+ |+.+|...+ .. ... ++++.++|+.++++..... ..+......+..... ..
T Consensus 152 -----~~--~~~---Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~-~~---- 216 (260)
T PRK06198 152 -----PF--LAA---YCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAA-AT---- 216 (260)
T ss_pred -----CC--cch---hHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHh-cc----
Confidence 00 223 666555443 11 122 8999999999988532110 000000000000000 00
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
..+..+.+++++++++++++..... ...|+.|++.++.
T Consensus 217 ---------~~~~~~~~~~~~a~~~~~l~~~~~~-~~~G~~~~~~~~~ 254 (260)
T PRK06198 217 ---------QPFGRLLDPDEVARAVAFLLSDESG-LMTGSVIDFDQSV 254 (260)
T ss_pred ---------CCccCCcCHHHHHHHHHHHcChhhC-CccCceEeECCcc
Confidence 1112256889999999988754432 1345788777653
No 191
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.51 E-value=1.2e-12 Score=109.80 Aligned_cols=213 Identities=15% Similarity=0.141 Sum_probs=122.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc-cc-----c--cCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI-TA-----I--QSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
|+|+|+||||+|+||+.+++.|+ +.|++|+++.++... .. . ...++..+++|+.+.+++.++++.
T Consensus 1 m~k~ilItGas~giG~~la~~l~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06947 1 MRKVVLITGASRGIGRATAVLAA-ARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFG 79 (248)
T ss_pred CCcEEEEeCCCCcHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 56899999999999999999999 689998776644322 11 1 123678899999999888776653
Q ss_pred -cCceeEEeecccc-----cCChHHHHHHHHHHHHHHHHHHHHHhhc-c-CC---ccEEEEeecccccccccCCCccccc
Q 042242 93 -LEDVTHIFWVTWA-----SQFASDMHKCCEQNKAMMCNALNAILPR-A-KA---LKHVSLQTGMKHYVSLQGLPEEKQV 161 (303)
Q Consensus 93 -~~~V~~~~~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~-~~---~~~~~~~s~~~~y~~~~~~~g~~~~ 161 (303)
+|.++|+++.... .....+....+++|+.++..++..+... . .+ -.+++.+++...+.+.
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~--------- 150 (248)
T PRK06947 80 RLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGS--------- 150 (248)
T ss_pred CCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCC---------
Confidence 4568888764321 1223333457899999988887655443 1 11 1234444432111000
Q ss_pred CCcCcCCCCCCCCccchHHHHHHHHH-----H---hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCce
Q 042242 162 RFYDEECPRVSKSNNFYYVLEDLLKE-----K---LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPF 232 (303)
Q Consensus 162 ~~~~e~~~~~p~~~~~~y~~~k~~~e-----~---~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (303)
+ .. ..+ |+.+|...+ . .... ++++++||+.+..+....... ... ..... ...|
T Consensus 151 -~-----~~--~~~---Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~--~~~--~~~~~--~~~~- 212 (248)
T PRK06947 151 -P-----NE--YVD---YAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQ--PGR--AARLG--AQTP- 212 (248)
T ss_pred -C-----CC--Ccc---cHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCC--HHH--HHHHh--hcCC-
Confidence 0 00 112 555554433 1 1112 999999999998753211000 010 00000 0111
Q ss_pred eeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 233 VFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 233 ~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
. ....+++++|..+++++..+... ..|+.+.+.++
T Consensus 213 ---~---------~~~~~~e~va~~~~~l~~~~~~~-~~G~~~~~~gg 247 (248)
T PRK06947 213 ---L---------GRAGEADEVAETIVWLLSDAASY-VTGALLDVGGG 247 (248)
T ss_pred ---C---------CCCcCHHHHHHHHHHHcCccccC-cCCceEeeCCC
Confidence 1 11457899999999987765422 34576766554
No 192
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.51 E-value=3.4e-12 Score=107.55 Aligned_cols=213 Identities=14% Similarity=0.079 Sum_probs=128.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHh-------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLT------- 91 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~------- 91 (303)
+.+|+++||||+|.||++++++|+ +.|++|++++|+..... ....++..+.+|+.|.+++.++++
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYV-EAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELG 85 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 356899999999999999999999 68999999999765421 112357788999999998877765
Q ss_pred ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc-CC--ccEEEEeecccccccccCCCcccccCCc
Q 042242 92 LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA-KA--LKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 92 ~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~--~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
.+|.++|.++.... ........+.+++|+.++..+++++.... .+ -..++.+++...+.. . .
T Consensus 86 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---------~--~ 154 (253)
T PRK05867 86 GIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHII---------N--V 154 (253)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCC---------C--C
Confidence 45568888654322 12233444578999999999998876541 11 123333332111100 0 0
Q ss_pred CcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
+. .... |+.+|...+ +. .+ +++..++||.+-.+..... ... .....+ ..|.
T Consensus 155 ----~~-~~~~---Y~asKaal~~~~~~la~e~~~~g-I~vn~i~PG~v~t~~~~~~----~~~--~~~~~~--~~~~-- 215 (253)
T PRK05867 155 ----PQ-QVSH---YCASKAAVIHLTKAMAVELAPHK-IRVNSVSPGYILTELVEPY----TEY--QPLWEP--KIPL-- 215 (253)
T ss_pred ----CC-Cccc---hHHHHHHHHHHHHHHHHHHhHhC-eEEEEeecCCCCCcccccc----hHH--HHHHHh--cCCC--
Confidence 00 0112 666554333 22 23 9999999999866321110 110 001111 1121
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+ .+..++++|.++++++..... ...|+.+.+.++.
T Consensus 216 -~----------r~~~p~~va~~~~~L~s~~~~-~~tG~~i~vdgG~ 250 (253)
T PRK05867 216 -G----------RLGRPEELAGLYLYLASEASS-YMTGSDIVIDGGY 250 (253)
T ss_pred -C----------CCcCHHHHHHHHHHHcCcccC-CcCCCeEEECCCc
Confidence 1 255788999999988764332 2446788777764
No 193
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.51 E-value=3.7e-12 Score=107.19 Aligned_cols=213 Identities=14% Similarity=0.124 Sum_probs=128.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----ccCCCeEEEEecCCCHHHHHHHHhc-------c
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----IQSSSYCFISCDLLNPLDIKRKLTL-------L 93 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~D~~~~~~l~~~~~~-------~ 93 (303)
+.+|+++||||+|.||++++++|+ +.|++|++++|+..... ....++.++.+|++|.++++++++. .
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~-~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLA-KAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHI 84 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence 346899999999999999999999 68999999988653211 1124578899999999988887764 4
Q ss_pred CceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc---CCccEEEEeecccccccccCCCcccccCCcCc
Q 042242 94 EDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA---KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 94 ~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~---~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
|.++|.++.... .....+..+.+++|+.++..+++++.... ..-.+++.+++...+.+.
T Consensus 85 D~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~-------------- 150 (251)
T PRK12481 85 DILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGG-------------- 150 (251)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCC--------------
Confidence 567787654321 12334455688999999988888876541 111344444443222110
Q ss_pred CCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCC
Q 042242 167 ECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGG 236 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 236 (303)
+. ... |+.+|...+ .. .+ +++..++||.+-.+....... ... ....+.. ..| .
T Consensus 151 --~~--~~~---Y~asK~a~~~l~~~la~e~~~~g-irvn~v~PG~v~t~~~~~~~~-~~~--~~~~~~~--~~p----~ 213 (251)
T PRK12481 151 --IR--VPS---YTASKSAVMGLTRALATELSQYN-INVNAIAPGYMATDNTAALRA-DTA--RNEAILE--RIP----A 213 (251)
T ss_pred --CC--Ccc---hHHHHHHHHHHHHHHHHHHhhcC-eEEEEEecCCCccCchhhccc-ChH--HHHHHHh--cCC----C
Confidence 00 112 666554433 11 23 999999999886632111000 000 0000110 111 1
Q ss_pred chhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 237 TREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
-.+..++|+|.++++++...... ..|+.+.+.++
T Consensus 214 ---------~~~~~peeva~~~~~L~s~~~~~-~~G~~i~vdgg 247 (251)
T PRK12481 214 ---------SRWGTPDDLAGPAIFLSSSASDY-VTGYTLAVDGG 247 (251)
T ss_pred ---------CCCcCHHHHHHHHHHHhCccccC-cCCceEEECCC
Confidence 12457889999999987643322 34577767665
No 194
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.50 E-value=2.9e-12 Score=108.77 Aligned_cols=218 Identities=12% Similarity=0.097 Sum_probs=130.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
+.+|+++||||+|.||++++++|+ ..|++|++++|++.+.. . ...++.++++|++|.++++++++.
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~-~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 86 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYA-KAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVG 86 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-HCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 346899999999999999999999 68999999998765431 1 123578899999999998887764
Q ss_pred -cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 93 -LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 93 -~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
.|.++|+++.... ........+.+++|+.++..++.++... .....+++.+++.... ++ .
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~------~~------~- 153 (265)
T PRK07097 87 VIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSE------LG------R- 153 (265)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCcccc------CC------C-
Confidence 4568888765322 2234455567889999988888877653 1122334443331110 00 0
Q ss_pred cCCCCCCCCccchHHHHHHHHH-----H---hcCC-cceEEecCCceeecCCCCccchh--hHHHHHHH-HhhhCCCcee
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE-----K---LAGK-VAWSVHRPGLLLGSSHRSLYNFL--GCLCVYGA-VCKHLNLPFV 233 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e-----~---~~~~-~~~~ilRp~~v~G~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~ 233 (303)
.+..+ |+.+|...+ + .... ++++.++|+.+..+......... .....+.. +.. ..|
T Consensus 154 -----~~~~~---Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~-- 221 (265)
T PRK07097 154 -----ETVSA---YAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIA--KTP-- 221 (265)
T ss_pred -----CCCcc---HHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHh--cCC--
Confidence 00222 666555433 1 1122 99999999999875321110000 00000000 000 011
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
...+.+.+|+|..+++++...... ..|+.+.+.++.
T Consensus 222 -----------~~~~~~~~dva~~~~~l~~~~~~~-~~g~~~~~~gg~ 257 (265)
T PRK07097 222 -----------AARWGDPEDLAGPAVFLASDASNF-VNGHILYVDGGI 257 (265)
T ss_pred -----------ccCCcCHHHHHHHHHHHhCcccCC-CCCCEEEECCCc
Confidence 112557789999999988764321 345777777664
No 195
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.49 E-value=2.9e-12 Score=108.15 Aligned_cols=209 Identities=15% Similarity=0.061 Sum_probs=125.8
Q ss_pred CCCCEEEEEcCCC--hhHHHHHHHHhhcCCCeEEEEecCCccc---------------c---ccCCCeEEEEecCCCHHH
Q 042242 26 DAKNVAVIFGVTG--LVGKELARRLISTANWKVYGIARKPEIT---------------A---IQSSSYCFISCDLLNPLD 85 (303)
Q Consensus 26 ~~~~~vlVtGatG--~iG~~l~~~L~~~~g~~V~~~~r~~~~~---------------~---~~~~~~~~~~~D~~~~~~ 85 (303)
+++|+||||||+| .||..++++|+ ..|++|++++|++.+. . ....+++++.+|+++.++
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~-~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 81 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLA-AKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA 81 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHH-HcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 3568999999996 69999999999 6899999999873211 0 012357889999999998
Q ss_pred HHHHHhc-------cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc-c-CCccEEEEeecccccccc
Q 042242 86 IKRKLTL-------LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR-A-KALKHVSLQTGMKHYVSL 152 (303)
Q Consensus 86 l~~~~~~-------~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~-~~~~~~~~~s~~~~y~~~ 152 (303)
+...++. .|.|+|+++.... .....+..+.+++|+.++..+++++... . ....+++.+++...+.
T Consensus 82 ~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~-- 159 (256)
T PRK12748 82 PNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG-- 159 (256)
T ss_pred HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC--
Confidence 8776654 3558888654211 1233445567899999999999988654 1 1123455544422221
Q ss_pred cCCCcccccCCcCcCCCCCCCCccchHHHHHHHHHH---------h-cCCcceEEecCCceeecCCCCccchhhHHHHHH
Q 042242 153 QGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKEK---------L-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYG 222 (303)
Q Consensus 153 ~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e~---------~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~ 222 (303)
|... ... |+.+|...+. . .+ ++++.++|+.+..+.. . .....
T Consensus 160 ----------~~~~------~~~---Y~~sK~a~~~~~~~la~e~~~~~-i~v~~i~Pg~~~t~~~--~----~~~~~-- 211 (256)
T PRK12748 160 ----------PMPD------ELA---YAATKGAIEAFTKSLAPELAEKG-ITVNAVNPGPTDTGWI--T----EELKH-- 211 (256)
T ss_pred ----------CCCC------chH---HHHHHHHHHHHHHHHHHHHHHhC-eEEEEEEeCcccCCCC--C----hhHHH--
Confidence 1100 122 6666554441 1 23 9999999988765311 1 01000
Q ss_pred HHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 223 AVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 223 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
... . ..+. ..+...+++|.++.+++..... +..|..+++.++.
T Consensus 212 ~~~-----~-~~~~---------~~~~~~~~~a~~~~~l~~~~~~-~~~g~~~~~d~g~ 254 (256)
T PRK12748 212 HLV-----P-KFPQ---------GRVGEPVDAARLIAFLVSEEAK-WITGQVIHSEGGF 254 (256)
T ss_pred hhh-----c-cCCC---------CCCcCHHHHHHHHHHHhCcccc-cccCCEEEecCCc
Confidence 000 0 0111 1134568889888877655322 1345788887653
No 196
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.49 E-value=3.7e-12 Score=106.42 Aligned_cols=209 Identities=11% Similarity=0.124 Sum_probs=123.0
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc-c-------ccCCCeEEEEecCCCHHHHHHHHhc-------c
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT-A-------IQSSSYCFISCDLLNPLDIKRKLTL-------L 93 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-~-------~~~~~~~~~~~D~~~~~~l~~~~~~-------~ 93 (303)
|++|||||+|+||++++++|+ +.|++|+++.|+.... . ....++.++.+|+.|.+++.++++. +
T Consensus 1 k~~lItG~sg~iG~~la~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLA-KDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPI 79 (242)
T ss_pred CEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 589999999999999999999 6899999998843221 1 1123678899999999888776653 4
Q ss_pred CceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCcC
Q 042242 94 EDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEE 167 (303)
Q Consensus 94 ~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~ 167 (303)
|.|+|+++... ......+..+.++.|+.++..+++.+... .....+++.+++...+.+ ..
T Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~------------~~-- 145 (242)
T TIGR01829 80 DVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKG------------QF-- 145 (242)
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCC------------CC--
Confidence 56888865432 12233444567899999988876665443 112234444443211100 00
Q ss_pred CCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCc
Q 042242 168 CPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGT 237 (303)
Q Consensus 168 ~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 237 (303)
.... |..+|...+ .. .+ ++++.++|+.+.++..... ..... ..... ..+
T Consensus 146 ----~~~~---y~~sk~a~~~~~~~la~~~~~~~-i~v~~i~pg~~~t~~~~~~---~~~~~--~~~~~--~~~------ 204 (242)
T TIGR01829 146 ----GQTN---YSAAKAGMIGFTKALAQEGATKG-VTVNTISPGYIATDMVMAM---REDVL--NSIVA--QIP------ 204 (242)
T ss_pred ----Ccch---hHHHHHHHHHHHHHHHHHhhhhC-eEEEEEeeCCCcCcccccc---chHHH--HHHHh--cCC------
Confidence 0112 555554221 11 23 9999999999987432211 01110 00111 111
Q ss_pred hhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 238 REIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 238 ~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+..+...++++.++.+++.++.. ...|+.+.+.++.
T Consensus 205 -------~~~~~~~~~~a~~~~~l~~~~~~-~~~G~~~~~~gg~ 240 (242)
T TIGR01829 205 -------VGRLGRPEEIAAAVAFLASEEAG-YITGATLSINGGL 240 (242)
T ss_pred -------CCCCcCHHHHHHHHHHHcCchhc-CccCCEEEecCCc
Confidence 11234667888888777655432 1346888888774
No 197
>PRK08589 short chain dehydrogenase; Validated
Probab=99.49 E-value=3.2e-12 Score=108.90 Aligned_cols=219 Identities=14% Similarity=0.042 Sum_probs=127.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
+++|++|||||+|+||++++++|+ +.|++|++++|+ .... . ...++.++.+|+.+.+++..+++.
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~-~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALA-QEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFG 81 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 346899999999999999999999 689999999998 3321 1 123578899999999888776654
Q ss_pred -cCceeEEeecccc-----cCChHHHHHHHHHHHHHHHHHHHHHhhc-cCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 93 -LEDVTHIFWVTWA-----SQFASDMHKCCEQNKAMMCNALNAILPR-AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 93 -~~~V~~~~~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
+|.++|.++.... ........+.+++|+.++..+++++... ..+-.+++.+++...+...
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------- 148 (272)
T PRK08589 82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAAD------------- 148 (272)
T ss_pred CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCC-------------
Confidence 4567888654321 1122334457889999988888876654 1111344444432222100
Q ss_pred cCCCCCCCCccchHHHHHHHHH-----H---hcCC-cceEEecCCceeecCCCCccchhhHHHHHHH-HhhhCCCceeeC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE-----K---LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGA-VCKHLNLPFVFG 235 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e-----~---~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 235 (303)
+. ... |+.+|...+ + .... +++..+.|+.|..+........... .... ...... ...+
T Consensus 149 ---~~--~~~---Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~--~~~~~~~~~~~--~~~~ 216 (272)
T PRK08589 149 ---LY--RSG---YNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSED--EAGKTFRENQK--WMTP 216 (272)
T ss_pred ---CC--Cch---HHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchh--hHHHHHhhhhh--ccCC
Confidence 00 122 666655443 1 1122 9999999999876421110000000 0000 000000 0001
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+-.+.+++++|.++++++...... ..|+.+.+.++.
T Consensus 217 ---------~~~~~~~~~va~~~~~l~s~~~~~-~~G~~i~vdgg~ 252 (272)
T PRK08589 217 ---------LGRLGKPEEVAKLVVFLASDDSSF-ITGETIRIDGGV 252 (272)
T ss_pred ---------CCCCcCHHHHHHHHHHHcCchhcC-cCCCEEEECCCc
Confidence 112457899999998887654322 345777776664
No 198
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.49 E-value=8e-12 Score=108.31 Aligned_cols=106 Identities=16% Similarity=0.105 Sum_probs=75.4
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c----cCCCeEEEEecCCCHHHHHHHHhc---
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I----QSSSYCFISCDLLNPLDIKRKLTL--- 92 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~----~~~~~~~~~~D~~~~~~l~~~~~~--- 92 (303)
.+++|+|+||||+|+||++++++|+ ..|++|++++|+..+.. . ....+.++.+|+.|.++++++++.
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~-~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 91 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALA-AKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA 91 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 3457899999999999999999999 68999999999765421 1 123577889999999988877653
Q ss_pred ----cCceeEEeecccccC--ChHHHHHHHHHHHHHHHHHHHHHh
Q 042242 93 ----LEDVTHIFWVTWASQ--FASDMHKCCEQNKAMMCNALNAIL 131 (303)
Q Consensus 93 ----~~~V~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~ll~~~~ 131 (303)
+|.++|.++...... ........+++|+.+...+...+.
T Consensus 92 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll 136 (306)
T PRK06197 92 AYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLL 136 (306)
T ss_pred hCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHH
Confidence 466888876532221 122223478999999554444443
No 199
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.49 E-value=1.9e-12 Score=123.13 Aligned_cols=230 Identities=14% Similarity=0.051 Sum_probs=130.9
Q ss_pred cCCCCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c----cCCCeEEEEecCCCHHHHHHHHhc
Q 042242 22 GREVDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I----QSSSYCFISCDLLNPLDIKRKLTL 92 (303)
Q Consensus 22 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~----~~~~~~~~~~D~~~~~~l~~~~~~ 92 (303)
...++++|+||||||+|+||++++++|+ +.|++|++++|+..... . ....+..+++|++|.+++.++++.
T Consensus 408 ~~~~l~gkvvLVTGasggIG~aiA~~La-~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~ 486 (676)
T TIGR02632 408 KEKTLARRVAFVTGGAGGIGRETARRLA-AEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFAD 486 (676)
T ss_pred CCcCCCCCEEEEeCCCcHHHHHHHHHHH-hCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHH
Confidence 3445567999999999999999999999 68999999999865432 0 112466889999999998888763
Q ss_pred -------cCceeEEeeccccc----CChHHHHHHHHHHHHHHHHHHHHHhhcc---CCccEEEEeecccccccccCCCcc
Q 042242 93 -------LEDVTHIFWVTWAS----QFASDMHKCCEQNKAMMCNALNAILPRA---KALKHVSLQTGMKHYVSLQGLPEE 158 (303)
Q Consensus 93 -------~~~V~~~~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~---~~~~~~~~~s~~~~y~~~~~~~g~ 158 (303)
+|.++|.++..... .........+++|+.+...+...+.... ..-.+++++++...+ +
T Consensus 487 i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~------~-- 558 (676)
T TIGR02632 487 VALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAV------Y-- 558 (676)
T ss_pred HHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhc------C--
Confidence 56688887653321 1223344577888888777665544321 111234444432111 0
Q ss_pred cccCCcCcCCCCCCCCccchHHHHHHHHH-----Hh---cCC-cceEEecCCcee-ecCCCCccchhhHHHHHHHHhhhC
Q 042242 159 KQVRFYDEECPRVSKSNNFYYVLEDLLKE-----KL---AGK-VAWSVHRPGLLL-GSSHRSLYNFLGCLCVYGAVCKHL 228 (303)
Q Consensus 159 ~~~~~~~e~~~~~p~~~~~~y~~~k~~~e-----~~---~~~-~~~~ilRp~~v~-G~~~~~~~~~~~~~~~~~~~~~~~ 228 (303)
..+ ...+ |+.+|...+ +. ... +++..++|+.|+ |.+.... .+... .....
T Consensus 559 --~~~--------~~~a---Y~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~-~~~~~----~~~~~-- 618 (676)
T TIGR02632 559 --AGK--------NASA---YSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDG-EWREE----RAAAY-- 618 (676)
T ss_pred --CCC--------CCHH---HHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccc-cchhh----hhhcc--
Confidence 000 0223 777766554 11 112 999999999887 3211110 00000 00000
Q ss_pred CCceeeCCc-hhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 229 NLPFVFGGT-REIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 229 ~~~~~~~g~-~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
+.+...... .... ..+...++++|+|+++++++...... ..|..+++.++..
T Consensus 619 ~~~~~~~~~~~~~r-~~l~r~v~peDVA~av~~L~s~~~~~-~TG~~i~vDGG~~ 671 (676)
T TIGR02632 619 GIPADELEEHYAKR-TLLKRHIFPADIAEAVFFLASSKSEK-TTGCIITVDGGVP 671 (676)
T ss_pred cCChHHHHHHHHhc-CCcCCCcCHHHHHHHHHHHhCCcccC-CcCcEEEECCCch
Confidence 000000000 0000 11223578899999999887544322 3458898887753
No 200
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.48 E-value=1.1e-11 Score=103.83 Aligned_cols=210 Identities=12% Similarity=0.135 Sum_probs=122.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCc-ccc-----c--cCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPE-ITA-----I--QSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~-~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
++|+++||||+|+||++++++|+ +.|++|+++.++.. ... . ....+..+.+|+.|.+++.+++++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~-~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLH-KDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG 80 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-HcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 35899999999999999999999 68999887654322 211 0 122466778999999988777653
Q ss_pred -cCceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 93 -LEDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 93 -~~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
+|.|+|+++... ......+..+.+++|+.++..+.+++... .....+++.+++.... . +.
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~------~------~~- 147 (246)
T PRK12938 81 EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQ------K------GQ- 147 (246)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhcc------C------CC-
Confidence 566888876432 12233445568899999988877776553 1122344444432111 0 00
Q ss_pred cCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
....+ |+.+|...+ +. .+ +++..++|+.+.++..... .... ...+.. ..+
T Consensus 148 -----~~~~~---y~~sK~a~~~~~~~l~~~~~~~g-i~v~~i~pg~~~t~~~~~~---~~~~--~~~~~~--~~~---- 207 (246)
T PRK12938 148 -----FGQTN---YSTAKAGIHGFTMSLAQEVATKG-VTVNTVSPGYIGTDMVKAI---RPDV--LEKIVA--TIP---- 207 (246)
T ss_pred -----CCChh---HHHHHHHHHHHHHHHHHHhhhhC-eEEEEEEecccCCchhhhc---ChHH--HHHHHh--cCC----
Confidence 00122 666555322 11 23 9999999999887422111 0110 001111 111
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
...+.+.++++.++.+++..+... ..|+.+.+.++
T Consensus 208 ---------~~~~~~~~~v~~~~~~l~~~~~~~-~~g~~~~~~~g 242 (246)
T PRK12938 208 ---------VRRLGSPDEIGSIVAWLASEESGF-STGADFSLNGG 242 (246)
T ss_pred ---------ccCCcCHHHHHHHHHHHcCcccCC-ccCcEEEECCc
Confidence 112456788888888877554321 34577877665
No 201
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.48 E-value=5.5e-12 Score=106.26 Aligned_cols=187 Identities=14% Similarity=0.058 Sum_probs=111.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc-cc-----cc---CCCeEEEEecCCCHHHHHHHHh------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI-TA-----IQ---SSSYCFISCDLLNPLDIKRKLT------ 91 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-~~-----~~---~~~~~~~~~D~~~~~~l~~~~~------ 91 (303)
..++|+||||+|.||++++++|++..|++|++++|++++ .. .. ..+++++++|+.|.+++.+.++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g 86 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG 86 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence 457999999999999999999984346999999998764 11 11 1268899999999887665554
Q ss_pred ccCceeEEeeccccc-C---ChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 92 LLEDVTHIFWVTWAS-Q---FASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 92 ~~~~V~~~~~~~~~~-~---~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
..|.++|.++..... . ......+.+++|+.++..+...+.+. ..+..+++.+++...+.+ .
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~------------~- 153 (253)
T PRK07904 87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERV------------R- 153 (253)
T ss_pred CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCC------------C-
Confidence 345466655432111 1 11112246899999887754443332 112234444443211100 0
Q ss_pred cCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGG 236 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 236 (303)
+ +... |+.+|.... ..... +++++++|+.+..+.. . . ...+ +
T Consensus 154 ---~--~~~~---Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~--~-----~----------~~~~---~- 204 (253)
T PRK07904 154 ---R--SNFV---YGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMS--A-----H----------AKEA---P- 204 (253)
T ss_pred ---C--CCcc---hHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchh--c-----c----------CCCC---C-
Confidence 0 0122 666554332 11222 9999999999986211 0 0 0000 0
Q ss_pred chhhhhhhcccCccHHHHHHHHHHHhcCc
Q 042242 237 TREIWEEYCLDGSDSRLVAEQHIWVATND 265 (303)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~a~a~~~~~~~~ 265 (303)
...+.+++|+.++..+.++
T Consensus 205 ----------~~~~~~~~A~~i~~~~~~~ 223 (253)
T PRK07904 205 ----------LTVDKEDVAKLAVTAVAKG 223 (253)
T ss_pred ----------CCCCHHHHHHHHHHHHHcC
Confidence 1357889999999988765
No 202
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.48 E-value=4.6e-12 Score=105.63 Aligned_cols=206 Identities=16% Similarity=0.111 Sum_probs=121.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc------cCCCeEEEEecCCCHHHHHHHHhcc-------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI------QSSSYCFISCDLLNPLDIKRKLTLL------- 93 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~D~~~~~~l~~~~~~~------- 93 (303)
++++|+||||+|+||+++++.|+ +.|++|++++|++..... ...+++++.+|+.+.+++.++++.+
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFAL-KEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999999998 689999999998764321 1135788999999999887776543
Q ss_pred CceeEEeeccccc--CChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCC
Q 042242 94 EDVTHIFWVTWAS--QFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRV 171 (303)
Q Consensus 94 ~~V~~~~~~~~~~--~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~ 171 (303)
|.++|.++..... .........++.|+.+...+++.+.....+-.+++..++.... + .+. +
T Consensus 83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~------~-----~~~----~-- 145 (238)
T PRK05786 83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGI------Y-----KAS----P-- 145 (238)
T ss_pred CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhc------c-----cCC----C--
Confidence 5466665432111 1112233467899998888888776642111233333321110 0 000 0
Q ss_pred CCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhh
Q 042242 172 SKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIW 241 (303)
Q Consensus 172 p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 241 (303)
+... |..+|...+ +. .+ ++++++||+.++++- ... ..+ + ... ...
T Consensus 146 ~~~~---Y~~sK~~~~~~~~~~~~~~~~~g-i~v~~i~pg~v~~~~--~~~---~~~-------~--~~~-~~~------ 200 (238)
T PRK05786 146 DQLS---YAVAKAGLAKAVEILASELLGRG-IRVNGIAPTTISGDF--EPE---RNW-------K--KLR-KLG------ 200 (238)
T ss_pred CchH---HHHHHHHHHHHHHHHHHHHhhcC-eEEEEEecCccCCCC--Cch---hhh-------h--hhc-ccc------
Confidence 0122 665554332 11 23 999999999999842 110 010 0 000 000
Q ss_pred hhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 242 EEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 242 ~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
......+++++++++++..+... ..|..+.+.++
T Consensus 201 ----~~~~~~~~va~~~~~~~~~~~~~-~~g~~~~~~~~ 234 (238)
T PRK05786 201 ----DDMAPPEDFAKVIIWLLTDEADW-VDGVVIPVDGG 234 (238)
T ss_pred ----CCCCCHHHHHHHHHHHhcccccC-ccCCEEEECCc
Confidence 11456788999999988654321 23466666543
No 203
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.48 E-value=4.7e-12 Score=110.56 Aligned_cols=195 Identities=13% Similarity=0.048 Sum_probs=121.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHh-------c
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLT-------L 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~-------~ 92 (303)
.+++|+||||+|.||++++++|+ ..|++|++++|++.... . ...++.++.+|++|.++++++++ .
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la-~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFA-RRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR 84 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 46899999999999999999999 68999999999875432 1 12356788999999998887764 3
Q ss_pred cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcCc
Q 042242 93 LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 93 ~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
+|.++|.++.... +....+..+.+++|+.++.++..++... ......++.+++...|... |
T Consensus 85 iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~----------p--- 151 (330)
T PRK06139 85 IDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQ----------P--- 151 (330)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCC----------C---
Confidence 4668888664322 2233444568999999999888876543 1112234443332222110 0
Q ss_pred CCCCCCCCccchHHHHHHHHH---------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCC
Q 042242 167 ECPRVSKSNNFYYVLEDLLKE---------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGG 236 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~e---------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 236 (303)
. ... |..+|.... ..... ++++.+.|+.+.++......+.. +...
T Consensus 152 ---~--~~~---Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~-------------~~~~---- 206 (330)
T PRK06139 152 ---Y--AAA---YSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYT-------------GRRL---- 206 (330)
T ss_pred ---C--chh---HHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccccc-------------cccc----
Confidence 0 122 666665322 22222 99999999999875322110000 0000
Q ss_pred chhhhhhhcccCccHHHHHHHHHHHhcCcC
Q 042242 237 TREIWEEYCLDGSDSRLVAEQHIWVATNDD 266 (303)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~ 266 (303)
.....+.+.+++|++++.++..+.
T Consensus 207 ------~~~~~~~~pe~vA~~il~~~~~~~ 230 (330)
T PRK06139 207 ------TPPPPVYDPRRVAKAVVRLADRPR 230 (330)
T ss_pred ------cCCCCCCCHHHHHHHHHHHHhCCC
Confidence 001124578889999988887653
No 204
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.47 E-value=9e-12 Score=105.58 Aligned_cols=107 Identities=17% Similarity=0.073 Sum_probs=78.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c---cCCCeEEEEecCCCHHHHHHHHhc-----
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I---QSSSYCFISCDLLNPLDIKRKLTL----- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~---~~~~~~~~~~D~~~~~~l~~~~~~----- 92 (303)
+++|+++||||+|.||++++++|+ +.|++|++++|++.+.. . ...++.++.+|++|.++++++++.
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g 84 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLA-RAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIG 84 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhC
Confidence 356899999999999999999999 68999999999865432 1 023578899999999988887764
Q ss_pred -cCceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 93 -LEDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 93 -~~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
.|.++|.++... .+.+..+..+.+++|+.+...+++++...
T Consensus 85 ~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~ 130 (263)
T PRK08339 85 EPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPA 130 (263)
T ss_pred CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 455777765422 12234455568899988877777666543
No 205
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.47 E-value=2.6e-12 Score=108.86 Aligned_cols=106 Identities=17% Similarity=0.201 Sum_probs=79.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----c--cCCCeEEEEecCCCHHHHHHHHhc-------c
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----I--QSSSYCFISCDLLNPLDIKRKLTL-------L 93 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~--~~~~~~~~~~D~~~~~~l~~~~~~-------~ 93 (303)
++++++||||+|+||++++++|+ +.|++|++++|+..... . ...++.++.+|+.+.+++.++++. .
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~-~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 83 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFA-RHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI 83 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-HCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999 68999999999764211 1 123577889999999988887764 3
Q ss_pred CceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 94 EDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 94 ~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
|.++|.++.... ........+.++.|+.++..+++++...
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 127 (263)
T PRK08226 84 DILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPE 127 (263)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 558888664221 2223344457899999999999887653
No 206
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.47 E-value=2e-12 Score=112.27 Aligned_cols=171 Identities=16% Similarity=0.038 Sum_probs=107.3
Q ss_pred CCCCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--c--CCCeEEEEecCCCHHHHHHHHhc-
Q 042242 23 REVDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--Q--SSSYCFISCDLLNPLDIKRKLTL- 92 (303)
Q Consensus 23 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~--~~~~~~~~~D~~~~~~l~~~~~~- 92 (303)
...+++|+++||||+++||.+++++|+ ..|++|++++|+..+.. . . ...+.++.+|+.|.++++++++.
T Consensus 9 ~~~l~gk~~lITGas~GIG~~~a~~La-~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~ 87 (313)
T PRK05854 9 VPDLSGKRAVVTGASDGLGLGLARRLA-AAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQL 87 (313)
T ss_pred CcccCCCEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHH
Confidence 344567999999999999999999999 68999999999865431 1 1 13578899999999988877654
Q ss_pred ------cCceeEEeeccccc---CChHHHHHHHHHHHHHHHHHHHHHhhc----cCCccEEEEeecccccccccCCCccc
Q 042242 93 ------LEDVTHIFWVTWAS---QFASDMHKCCEQNKAMMCNALNAILPR----AKALKHVSLQTGMKHYVSLQGLPEEK 159 (303)
Q Consensus 93 ------~~~V~~~~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~~~~~s~~~~y~~~~~~~g~~ 159 (303)
+|.++|.|+..... ......+..+.+|+.+...+...+... ..+++.+++.+ .+.+...
T Consensus 88 ~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~---~~~~~~~----- 159 (313)
T PRK05854 88 RAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIA---ARRGAIN----- 159 (313)
T ss_pred HHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechh---hcCCCcC-----
Confidence 45577776643221 122333457899999988777776643 23333333322 2211100
Q ss_pred ccCCcCcCCCCCCCCccchHHHHHHHHH-----Hh----c-CC-cceEEecCCceeec
Q 042242 160 QVRFYDEECPRVSKSNNFYYVLEDLLKE-----KL----A-GK-VAWSVHRPGLLLGS 206 (303)
Q Consensus 160 ~~~~~~e~~~~~p~~~~~~y~~~k~~~e-----~~----~-~~-~~~~ilRp~~v~G~ 206 (303)
..+..++.+..+.. .|+.+|.... ++ . +. +.+..+.||.+-..
T Consensus 160 -~~~~~~~~~~~~~~---~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~ 213 (313)
T PRK05854 160 -WDDLNWERSYAGMR---AYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN 213 (313)
T ss_pred -cccccccccCcchh---hhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence 11122222222122 3787776544 21 1 22 89999999988653
No 207
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.47 E-value=3.9e-12 Score=107.80 Aligned_cols=106 Identities=17% Similarity=0.182 Sum_probs=80.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-c-----cCCCeEEEEecCCCHHHHHHHHhc------cC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-I-----QSSSYCFISCDLLNPLDIKRKLTL------LE 94 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~-----~~~~~~~~~~D~~~~~~l~~~~~~------~~ 94 (303)
++++++||||+|+||+.++++|+ +.|++|++++|++.... . ...++.++.+|+.|.+++.+.++. .|
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id 82 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALA-AAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN 82 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 45799999999999999999999 68999999999865432 1 123678899999999988776653 46
Q ss_pred ceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 95 DVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 95 ~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
.++|+++.... ..+.....+.+++|+.++.++++.+...
T Consensus 83 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~ 125 (263)
T PRK09072 83 VLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPL 125 (263)
T ss_pred EEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 68888664321 1233444568899999999999988764
No 208
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.47 E-value=4.6e-12 Score=105.11 Aligned_cols=208 Identities=14% Similarity=0.044 Sum_probs=125.5
Q ss_pred EEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc------cCCCeEEEEecCCCHHHHHHHHhcc---CceeEEeec
Q 042242 32 VIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI------QSSSYCFISCDLLNPLDIKRKLTLL---EDVTHIFWV 102 (303)
Q Consensus 32 lVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~D~~~~~~l~~~~~~~---~~V~~~~~~ 102 (303)
+||||+|+||+.++++|+ +.|++|++++|++..... ...+++++.+|++|.+++.++++.. |.++|.++.
T Consensus 1 lItGas~~iG~~~a~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~ 79 (230)
T PRK07041 1 LVVGGSSGIGLALARAFA-AEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAAD 79 (230)
T ss_pred CeecCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCC
Confidence 699999999999999999 689999999998644221 1246788999999999999988764 557777654
Q ss_pred ccc----cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccch
Q 042242 103 TWA----SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFY 178 (303)
Q Consensus 103 ~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~ 178 (303)
... ........+.++.|+.+...++++.... ...+++..++...|... .+..+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~g~iv~~ss~~~~~~~------------------~~~~~--- 136 (230)
T PRK07041 80 TPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIA--PGGSLTFVSGFAAVRPS------------------ASGVL--- 136 (230)
T ss_pred CCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhc--CCeEEEEECchhhcCCC------------------CcchH---
Confidence 221 1233445568899999999998854432 23455554443222110 00223
Q ss_pred HHHHHHHHH-----HhcC--CcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccH
Q 042242 179 YVLEDLLKE-----KLAG--KVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDS 251 (303)
Q Consensus 179 y~~~k~~~e-----~~~~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 251 (303)
|+.+|...+ .... .++++.++|+.+-.+.......- ........... ..+. ....+.
T Consensus 137 Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~-~~~~~~~~~~~--~~~~-------------~~~~~~ 200 (230)
T PRK07041 137 QGAINAALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGD-AREAMFAAAAE--RLPA-------------RRVGQP 200 (230)
T ss_pred HHHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhcc-chHHHHHHHHh--cCCC-------------CCCcCH
Confidence 666655544 1111 17788888887755211000000 00000000110 1110 013467
Q ss_pred HHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 252 RLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 252 ~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
+|+|++++.++.++.. .|+.|++.++.+
T Consensus 201 ~dva~~~~~l~~~~~~---~G~~~~v~gg~~ 228 (230)
T PRK07041 201 EDVANAILFLAANGFT---TGSTVLVDGGHA 228 (230)
T ss_pred HHHHHHHHHHhcCCCc---CCcEEEeCCCee
Confidence 8999999998876533 358999988754
No 209
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.47 E-value=6.8e-12 Score=105.67 Aligned_cols=104 Identities=15% Similarity=0.113 Sum_probs=77.5
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHhc-------cC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLTL-------LE 94 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~-------~~ 94 (303)
|+++||||+|+||.+++++|+ +.|++|++++|++.... . ...++.++.+|+.|.+++.++++. +|
T Consensus 1 k~~lItG~sg~iG~~la~~l~-~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id 79 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLA-KDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFD 79 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 589999999999999999999 68999999999754321 1 123577889999999988877654 36
Q ss_pred ceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 95 DVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 95 ~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
.|+|.++.... ..+..+..+.+++|+.++..+++++...
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 122 (254)
T TIGR02415 80 VMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQ 122 (254)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 68888765322 2233444568899999988887776543
No 210
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.46 E-value=1.3e-11 Score=104.41 Aligned_cols=215 Identities=9% Similarity=0.002 Sum_probs=121.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc-c-----c---cCCCeEEEEecCCCHHHHHHHHhc---
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT-A-----I---QSSSYCFISCDLLNPLDIKRKLTL--- 92 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-~-----~---~~~~~~~~~~D~~~~~~l~~~~~~--- 92 (303)
.+++|+++||||++.||++++++|+ +.|++|+++.|+.... . . ...++.++++|++|.++++++++.
T Consensus 5 ~l~~k~vlItGas~gIG~~ia~~l~-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (260)
T PRK08416 5 EMKGKTLVISGGTRGIGKAIVYEFA-QSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE 83 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 3457899999999999999999999 6899998887654321 1 1 123578899999999988877764
Q ss_pred ----cCceeEEeeccc----------ccCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCC
Q 042242 93 ----LEDVTHIFWVTW----------ASQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLP 156 (303)
Q Consensus 93 ----~~~V~~~~~~~~----------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~ 156 (303)
+|.++|.++... ...+.....+.+++|+.+...+...+.... ....+++.+++...+.
T Consensus 84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------ 157 (260)
T PRK08416 84 DFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLV------ 157 (260)
T ss_pred hcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecccccc------
Confidence 345777764311 111233444577888888776666554431 1122444444321110
Q ss_pred cccccCCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhh
Q 042242 157 EEKQVRFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCK 226 (303)
Q Consensus 157 g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~ 226 (303)
+. +. ... |+.+|...+ +. .+ +++..+.|+.+-.+......+. ... .....+
T Consensus 158 ------~~----~~--~~~---Y~asK~a~~~~~~~la~el~~~g-i~v~~v~PG~i~T~~~~~~~~~-~~~--~~~~~~ 218 (260)
T PRK08416 158 ------YI----EN--YAG---HGTSKAAVETMVKYAATELGEKN-IRVNAVSGGPIDTDALKAFTNY-EEV--KAKTEE 218 (260)
T ss_pred ------CC----CC--ccc---chhhHHHHHHHHHHHHHHhhhhC-eEEEEEeeCcccChhhhhccCC-HHH--HHHHHh
Confidence 00 00 112 555544433 11 23 9999999988755311100000 000 000000
Q ss_pred hCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 227 HLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 227 ~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
..| ...+.+++|+|.++++++...... ..|+.+.+.++.
T Consensus 219 --~~~-------------~~r~~~p~~va~~~~~l~~~~~~~-~~G~~i~vdgg~ 257 (260)
T PRK08416 219 --LSP-------------LNRMGQPEDLAGACLFLCSEKASW-LTGQTIVVDGGT 257 (260)
T ss_pred --cCC-------------CCCCCCHHHHHHHHHHHcChhhhc-ccCcEEEEcCCe
Confidence 111 112567889999999987654321 345777776653
No 211
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.46 E-value=7.1e-12 Score=105.59 Aligned_cols=213 Identities=13% Similarity=0.055 Sum_probs=127.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---c--cCCCeEEEEecCCCHHHHHHHHhc-------c
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---I--QSSSYCFISCDLLNPLDIKRKLTL-------L 93 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---~--~~~~~~~~~~D~~~~~~l~~~~~~-------~ 93 (303)
+.+|+++||||+|.||++++++|+ +.|++|++++|...... . ...++..+++|+.|.+++.++++. .
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~-~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 86 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLA-EAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHI 86 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 456899999999999999999999 68999998887643211 1 123577889999999988877764 4
Q ss_pred CceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhcc-C--CccEEEEeecccccccccCCCcccccCCcCc
Q 042242 94 EDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPRA-K--ALKHVSLQTGMKHYVSLQGLPEEKQVRFYDE 166 (303)
Q Consensus 94 ~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~--~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e 166 (303)
|.++|+++... .+....+..+.+++|+.++..+++++.... . .-..++.+++...+.+.
T Consensus 87 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------------- 152 (253)
T PRK08993 87 DILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGG-------------- 152 (253)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCC--------------
Confidence 66888876432 122344555689999999999998876541 1 11234444443232111
Q ss_pred CCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCC
Q 042242 167 ECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGG 236 (303)
Q Consensus 167 ~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 236 (303)
+. ... |+.+|...+ .. .+ +++..++|+.+-.+..... .........+.. ..| .
T Consensus 153 --~~--~~~---Y~~sKaa~~~~~~~la~e~~~~g-i~v~~v~pG~v~T~~~~~~---~~~~~~~~~~~~--~~p----~ 215 (253)
T PRK08993 153 --IR--VPS---YTASKSGVMGVTRLMANEWAKHN-INVNAIAPGYMATNNTQQL---RADEQRSAEILD--RIP----A 215 (253)
T ss_pred --CC--Ccc---hHHHHHHHHHHHHHHHHHhhhhC-eEEEEEeeCcccCcchhhh---ccchHHHHHHHh--cCC----C
Confidence 00 112 565554433 11 23 9999999999976321100 000000000100 111 1
Q ss_pred chhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 237 TREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
..+...+++|..+++++...... ..|..+.+.++
T Consensus 216 ---------~r~~~p~eva~~~~~l~s~~~~~-~~G~~~~~dgg 249 (253)
T PRK08993 216 ---------GRWGLPSDLMGPVVFLASSASDY-INGYTIAVDGG 249 (253)
T ss_pred ---------CCCcCHHHHHHHHHHHhCccccC-ccCcEEEECCC
Confidence 11456789999999988654332 34566666554
No 212
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.46 E-value=4.6e-12 Score=109.06 Aligned_cols=160 Identities=12% Similarity=0.076 Sum_probs=103.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHh------
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLT------ 91 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~------ 91 (303)
.+.+++|+||||+|+||+++++.|+ +.|++|++++|+.+... . ...++.++++|+.|.+++.++++
T Consensus 37 ~~~~k~vlItGasggIG~~la~~La-~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 115 (293)
T PRK05866 37 DLTGKRILLTGASSGIGEAAAEQFA-RRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRI 115 (293)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3346899999999999999999999 68999999999865421 0 12346788999999998888777
Q ss_pred -ccCceeEEeecccccC------ChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccC
Q 042242 92 -LLEDVTHIFWVTWASQ------FASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVR 162 (303)
Q Consensus 92 -~~~~V~~~~~~~~~~~------~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~ 162 (303)
.+|.++|+++...... ...+....+++|+.+...+++++... .....+++.+++...+..
T Consensus 116 g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------- 184 (293)
T PRK05866 116 GGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSE----------- 184 (293)
T ss_pred CCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC-----------
Confidence 4566888876543211 12333457899999988888876543 112234444443212110
Q ss_pred CcCcCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceee
Q 042242 163 FYDEECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLG 205 (303)
Q Consensus 163 ~~~e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G 205 (303)
..+. ... |+.+|...+ ..... +++++++|+.+-.
T Consensus 185 ----~~p~--~~~---Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T 227 (293)
T PRK05866 185 ----ASPL--FSV---YNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVAT 227 (293)
T ss_pred ----CCCC--cch---HHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccC
Confidence 0010 223 676665443 11222 9999999987665
No 213
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.45 E-value=4.2e-12 Score=107.81 Aligned_cols=105 Identities=10% Similarity=0.134 Sum_probs=81.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhc-------cCceeE
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTL-------LEDVTH 98 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~-------~~~V~~ 98 (303)
+++|+++||||+|+||++++++|+ +.|++|++++|++.... ..++.++++|++|.++++++++. +|.++|
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~-~~G~~v~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~ 83 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELL-ANGANVVNADIHGGDGQ--HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVN 83 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCccccc--cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 457899999999999999999999 68999999999875432 34678899999999988877764 466888
Q ss_pred Eeecccc-------------cCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 99 IFWVTWA-------------SQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 99 ~~~~~~~-------------~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
+++.... ..+..+..+.+++|+.++..+++++...
T Consensus 84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 131 (266)
T PRK06171 84 NAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQ 131 (266)
T ss_pred CCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHH
Confidence 8764221 1233444558899999999999888764
No 214
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.45 E-value=2.6e-11 Score=102.67 Aligned_cols=213 Identities=15% Similarity=0.066 Sum_probs=122.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc------c--cCCCeEEEEecCCCHHHHHHHHhc-----
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA------I--QSSSYCFISCDLLNPLDIKRKLTL----- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~------~--~~~~~~~~~~D~~~~~~l~~~~~~----- 92 (303)
.++|+++||||+|.||++++++|+ +.|++|+++.|+..+.. . ...++.++.+|++|.+++.+.++.
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~-~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~ 83 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFG-KEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF 83 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 457899999999999999999999 68999988888543211 1 123567889999999988777654
Q ss_pred --cCceeEEeeccccc----CChHHHHHHHHHHHHHHHHHHHHHhhc---cCCccEEEEeecccccccccCCCcccccCC
Q 042242 93 --LEDVTHIFWVTWAS----QFASDMHKCCEQNKAMMCNALNAILPR---AKALKHVSLQTGMKHYVSLQGLPEEKQVRF 163 (303)
Q Consensus 93 --~~~V~~~~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~ 163 (303)
+|.++|.++..... .......+.+++|+.++..++..+... ...-.+++.+++...+
T Consensus 84 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~-------------- 149 (261)
T PRK08936 84 GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ-------------- 149 (261)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc--------------
Confidence 45688887653221 223344457899988877665554332 1111234443331111
Q ss_pred cCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCcee
Q 042242 164 YDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 164 ~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
.+..+..+ |+.+|...+ +. .+ +++++++|+.+..+........ ... ...+.. ..|
T Consensus 150 ----~~~~~~~~---Y~~sKaa~~~~~~~la~e~~~~g-i~v~~v~pg~v~t~~~~~~~~~-~~~--~~~~~~--~~~-- 214 (261)
T PRK08936 150 ----IPWPLFVH---YAASKGGVKLMTETLAMEYAPKG-IRVNNIGPGAINTPINAEKFAD-PKQ--RADVES--MIP-- 214 (261)
T ss_pred ----CCCCCCcc---cHHHHHHHHHHHHHHHHHHhhcC-eEEEEEEECcCCCCccccccCC-HHH--HHHHHh--cCC--
Confidence 01111223 666553222 22 23 9999999999987532211100 010 000100 111
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
+..+.+.++++..+++++..+... ..|..+.+.++
T Consensus 215 -----------~~~~~~~~~va~~~~~l~s~~~~~-~~G~~i~~d~g 249 (261)
T PRK08936 215 -----------MGYIGKPEEIAAVAAWLASSEASY-VTGITLFADGG 249 (261)
T ss_pred -----------CCCCcCHHHHHHHHHHHcCcccCC-ccCcEEEECCC
Confidence 112567788999998887654322 33466656554
No 215
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.45 E-value=3.1e-12 Score=107.11 Aligned_cols=104 Identities=18% Similarity=0.074 Sum_probs=79.0
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc--------cCCCeEEEEecCCCHHHHHHHHhcc----Cce
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI--------QSSSYCFISCDLLNPLDIKRKLTLL----EDV 96 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~~D~~~~~~l~~~~~~~----~~V 96 (303)
|+|+||||+|+||++++++|+ +.|++|++++|++++... ...+++++++|+.|.+++++.++.+ |.+
T Consensus 2 ~~vlItGas~giG~~~a~~l~-~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v 80 (243)
T PRK07102 2 KKILIIGATSDIARACARRYA-AAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV 80 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence 689999999999999999999 689999999998754321 1236889999999999888877653 557
Q ss_pred eEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 97 THIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 97 ~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
+|.++... ...+..+..+.++.|+.++..+++++...
T Consensus 81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 121 (243)
T PRK07102 81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANR 121 (243)
T ss_pred EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 77654321 12233444467899999999999887754
No 216
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.45 E-value=1.7e-11 Score=103.95 Aligned_cols=107 Identities=20% Similarity=0.127 Sum_probs=77.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------cc--CCCeEEEEecCCCHHHHHHHHhc----
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQ--SSSYCFISCDLLNPLDIKRKLTL---- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~--~~~~~~~~~D~~~~~~l~~~~~~---- 92 (303)
.++|+++||||+|+||++++++|+ ..|++|++++|++.+.. .. ..++.++.+|++|.+++.++++.
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLL-EAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR 84 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHH-HCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 457899999999999999999999 68999999999875432 01 12567889999999988776654
Q ss_pred ---cCceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 93 ---LEDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 93 ---~~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
+|.++|.++... ......+..+.+++|+.+...+++.+...
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 132 (265)
T PRK07062 85 FGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPL 132 (265)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 355788766422 12223344457888988877777766543
No 217
>PRK06484 short chain dehydrogenase; Validated
Probab=99.44 E-value=1.2e-11 Score=114.98 Aligned_cols=215 Identities=15% Similarity=0.149 Sum_probs=131.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHhc-------cCc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLTL-------LED 95 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~~-------~~~ 95 (303)
.+|+++||||+|.||++++++|+ +.|++|++++|++.... ....++..+.+|++|.+++.++++. +|.
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 346 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFA-AAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV 346 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 46899999999999999999999 68999999999865432 1123566789999999988877754 456
Q ss_pred eeEEeeccc-----ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCC
Q 042242 96 VTHIFWVTW-----ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPR 170 (303)
Q Consensus 96 V~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~ 170 (303)
++|.++... ...+..+..+.+++|+.++..+++++.....+-.+++.+++...+... +
T Consensus 347 li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~- 409 (520)
T PRK06484 347 LVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLAL----------------P- 409 (520)
T ss_pred EEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCC----------------C-
Confidence 888866431 122334445689999999999999887652222344444432121000 0
Q ss_pred CCCCccchHHHHHHHHH-----H---hcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhh
Q 042242 171 VSKSNNFYYVLEDLLKE-----K---LAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIW 241 (303)
Q Consensus 171 ~p~~~~~~y~~~k~~~e-----~---~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 241 (303)
+... |+.+|...+ . .... +++..++|+.+..+........ .. ..+..+.+ ..|
T Consensus 410 -~~~~---Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~-~~-~~~~~~~~--~~~---------- 471 (520)
T PRK06484 410 -PRNA---YCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKAS-GR-ADFDSIRR--RIP---------- 471 (520)
T ss_pred -CCch---hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccc-cH-HHHHHHHh--cCC----------
Confidence 0122 666555443 1 1122 9999999999987422111000 00 00011111 111
Q ss_pred hhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 242 EEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 242 ~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+-.+.+++|+|.++++++...... ..|+.+.+.++.
T Consensus 472 ---~~~~~~~~dia~~~~~l~s~~~~~-~~G~~i~vdgg~ 507 (520)
T PRK06484 472 ---LGRLGDPEEVAEAIAFLASPAASY-VNGATLTVDGGW 507 (520)
T ss_pred ---CCCCcCHHHHHHHHHHHhCccccC-ccCcEEEECCCc
Confidence 112457899999999987654321 345788887664
No 218
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.44 E-value=1.1e-11 Score=105.11 Aligned_cols=217 Identities=13% Similarity=0.026 Sum_probs=127.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHhc-------cCc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLTL-------LED 95 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~~-------~~~ 95 (303)
++|+++||||+|+||++++++|+ +.|++|++++|++.+.. ....++.++++|+.|.+++..+++. +|.
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 83 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFL-AEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC 83 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 46899999999999999999999 68999999999865432 1123577899999999888777654 456
Q ss_pred eeEEeecccc-----cCChHH----HHHHHHHHHHHHHHHHHHHhhcc-CCccEEEEeecccccccccCCCcccccCCcC
Q 042242 96 VTHIFWVTWA-----SQFASD----MHKCCEQNKAMMCNALNAILPRA-KALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 96 V~~~~~~~~~-----~~~~~~----~~~~~~~n~~~~~~ll~~~~~~~-~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
++|.++.... ...... ..+.+++|+.++..+++++.... ..-..++.+++...+...
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------------- 150 (263)
T PRK06200 84 FVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPG------------- 150 (263)
T ss_pred EEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCC-------------
Confidence 8888664211 111111 23467899999998888887541 111234444432222100
Q ss_pred cCCCCCCCCccchHHHHHHHHH---------HhcCCcceEEecCCceeecCCCCc-cc----hhhHHH-HHHHHhhhCCC
Q 042242 166 EECPRVSKSNNFYYVLEDLLKE---------KLAGKVAWSVHRPGLLLGSSHRSL-YN----FLGCLC-VYGAVCKHLNL 230 (303)
Q Consensus 166 e~~~~~p~~~~~~y~~~k~~~e---------~~~~~~~~~ilRp~~v~G~~~~~~-~~----~~~~~~-~~~~~~~~~~~ 230 (303)
.+... |+.+|...+ +... +++..+.|+.+..+-.... .. ...... ....+.. .
T Consensus 151 -----~~~~~---Y~~sK~a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~- 218 (263)
T PRK06200 151 -----GGGPL---YTASKHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAA--I- 218 (263)
T ss_pred -----CCCch---hHHHHHHHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhc--C-
Confidence 00112 666555433 2234 8999999998865321100 00 000000 0000000 1
Q ss_pred ceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 231 PFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 231 ~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
..+..+...+++|.++++++.........|+.+.+.++.
T Consensus 219 ------------~p~~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG~ 257 (263)
T PRK06200 219 ------------TPLQFAPQPEDHTGPYVLLASRRNSRALTGVVINADGGL 257 (263)
T ss_pred ------------CCCCCCCCHHHHhhhhhheecccccCcccceEEEEcCce
Confidence 111235677899999998876441212345778777663
No 219
>PRK07069 short chain dehydrogenase; Validated
Probab=99.44 E-value=5.2e-12 Score=106.16 Aligned_cols=211 Identities=15% Similarity=0.109 Sum_probs=118.8
Q ss_pred EEEEEcCCChhHHHHHHHHhhcCCCeEEEEecC-Ccccc-----cc----CCCeEEEEecCCCHHHHHHHHhc-------
Q 042242 30 VAVIFGVTGLVGKELARRLISTANWKVYGIARK-PEITA-----IQ----SSSYCFISCDLLNPLDIKRKLTL------- 92 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~-~~~~~-----~~----~~~~~~~~~D~~~~~~l~~~~~~------- 92 (303)
+|+||||+|+||+++++.|+ +.|++|++++|+ .+... .. ...+.++++|+.|.+++.++++.
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMA-EQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGG 79 (251)
T ss_pred CEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 48999999999999999999 689999999998 33211 00 11234578999999988777654
Q ss_pred cCceeEEeeccccc----CChHHHHHHHHHHHH----HHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCc
Q 042242 93 LEDVTHIFWVTWAS----QFASDMHKCCEQNKA----MMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 93 ~~~V~~~~~~~~~~----~~~~~~~~~~~~n~~----~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
+|.|+|+++..... ....+....+++|+. ++..++..+++. +..+++.+++...+.+.
T Consensus 80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~ii~~ss~~~~~~~------------ 145 (251)
T PRK07069 80 LSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS--QPASIVNISSVAAFKAE------------ 145 (251)
T ss_pred ccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc--CCcEEEEecChhhccCC------------
Confidence 45688887643221 122333457788888 556666666543 23355555443232111
Q ss_pred CcCCCCCCCCccchHHHHHHHHH---------Hh-cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCcee
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE---------KL-AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
+. ... |+.+|...+ +. .+. ++++.++|+.+.++..............+..+.+ +.+
T Consensus 146 ----~~--~~~---Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~-- 212 (251)
T PRK07069 146 ----PD--YTA---YNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLAR--GVP-- 212 (251)
T ss_pred ----CC--Cch---hHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhc--cCC--
Confidence 00 112 665554433 11 222 8889999998887432111000000000000100 111
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
...+.+++|+|.++++++..+... ..|+.+.+.++
T Consensus 213 -----------~~~~~~~~~va~~~~~l~~~~~~~-~~g~~i~~~~g 247 (251)
T PRK07069 213 -----------LGRLGEPDDVAHAVLYLASDESRF-VTGAELVIDGG 247 (251)
T ss_pred -----------CCCCcCHHHHHHHHHHHcCccccC-ccCCEEEECCC
Confidence 112457899999998876554322 34466655544
No 220
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.43 E-value=2.2e-11 Score=105.07 Aligned_cols=158 Identities=16% Similarity=0.098 Sum_probs=104.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c-cCCCeEEEEecCCCHHHHHHHHhc-------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I-QSSSYCFISCDLLNPLDIKRKLTL------- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~-~~~~~~~~~~D~~~~~~l~~~~~~------- 92 (303)
..+++|+||||+|.||..+++.|. +.|++|++++|++.... . ....+..+.+|++|.+++.++++.
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLH-ARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGG 85 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 456899999999999999999998 68999999999865432 1 112455667999999988776653
Q ss_pred cCceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhc-cCCccEEEEeecccccccccCCCcccccCCcCcC
Q 042242 93 LEDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPR-AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEE 167 (303)
Q Consensus 93 ~~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~ 167 (303)
+|.|+|.++... ...+.....+.+++|+.++.++++++... ..+-.+++.+++...+... +
T Consensus 86 id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~----------~---- 151 (296)
T PRK05872 86 IDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAA----------P---- 151 (296)
T ss_pred CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCC----------C----
Confidence 456888766432 12233444568899999999999988754 1122345555543222110 0
Q ss_pred CCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeec
Q 042242 168 CPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGS 206 (303)
Q Consensus 168 ~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~ 206 (303)
. ... |+.+|...+ .. .+ +.+.++.|+.+..+
T Consensus 152 --~--~~~---Y~asKaal~~~~~~l~~e~~~~g-i~v~~v~Pg~v~T~ 192 (296)
T PRK05872 152 --G--MAA---YCASKAGVEAFANALRLEVAHHG-VTVGSAYLSWIDTD 192 (296)
T ss_pred --C--chH---HHHHHHHHHHHHHHHHHHHHHHC-cEEEEEecCcccch
Confidence 0 122 776665443 11 23 89999999888764
No 221
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.42 E-value=2.7e-11 Score=103.35 Aligned_cols=101 Identities=18% Similarity=0.109 Sum_probs=76.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----cc--CCCeEEEEecCCCHHHHHHHHhc------c
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----IQ--SSSYCFISCDLLNPLDIKRKLTL------L 93 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~--~~~~~~~~~D~~~~~~l~~~~~~------~ 93 (303)
|+|+++|||+ |+||++++++|. .|++|++++|++.+.. .. ..++.++++|++|.+++.++++. +
T Consensus 1 ~~k~~lItGa-~gIG~~la~~l~--~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~i 77 (275)
T PRK06940 1 MKEVVVVIGA-GGIGQAIARRVG--AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPV 77 (275)
T ss_pred CCCEEEEECC-ChHHHHHHHHHh--CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCC
Confidence 6789999997 799999999995 5899999999865432 11 13577889999999988877754 4
Q ss_pred CceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 94 EDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 94 ~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
|.++|.++... ...+..+.+++|+.++.++++++...
T Consensus 78 d~li~nAG~~~---~~~~~~~~~~vN~~g~~~l~~~~~~~ 114 (275)
T PRK06940 78 TGLVHTAGVSP---SQASPEAILKVDLYGTALVLEEFGKV 114 (275)
T ss_pred CEEEECCCcCC---chhhHHHHHHHhhHHHHHHHHHHHHH
Confidence 55788776432 22334458999999999999988765
No 222
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.42 E-value=4.9e-11 Score=101.01 Aligned_cols=212 Identities=10% Similarity=0.058 Sum_probs=126.4
Q ss_pred CCCCEEEEEcCCC-hhHHHHHHHHhhcCCCeEEEEecCCcccc-----cc----CCCeEEEEecCCCHHHHHHHHhc---
Q 042242 26 DAKNVAVIFGVTG-LVGKELARRLISTANWKVYGIARKPEITA-----IQ----SSSYCFISCDLLNPLDIKRKLTL--- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG-~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~----~~~~~~~~~D~~~~~~l~~~~~~--- 92 (303)
+.+++++||||+| .||+.+++.|+ ..|++|++++|+..+.. .. ..++.++++|+.+.+++.++++.
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRAL-EEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 3468999999998 69999999999 68999999998765422 10 13577889999999888877754
Q ss_pred ----cCceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhcc--CC-ccEEEEeecccccccccCCCccccc
Q 042242 93 ----LEDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPRA--KA-LKHVSLQTGMKHYVSLQGLPEEKQV 161 (303)
Q Consensus 93 ----~~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~-~~~~~~~s~~~~y~~~~~~~g~~~~ 161 (303)
+|.++|+++... ...+..+..+.++.|+.++..+++++.... .. ...++.+++...+ .
T Consensus 94 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~--~--------- 162 (262)
T PRK07831 94 RLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGW--R--------- 162 (262)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhc--C---------
Confidence 456888876422 122234445578899999999888876541 11 2233333321111 0
Q ss_pred CCcCcCCCCCCCCccchHHHHHHHHH-----Hh---cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCce
Q 042242 162 RFYDEECPRVSKSNNFYYVLEDLLKE-----KL---AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPF 232 (303)
Q Consensus 162 ~~~~e~~~~~p~~~~~~y~~~k~~~e-----~~---~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (303)
+. .+... |+.+|...+ ++ ... +++..++|+.+..+...... .. ..+..+.. ..+
T Consensus 163 -~~------~~~~~---Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~---~~-~~~~~~~~--~~~- 225 (262)
T PRK07831 163 -AQ------HGQAH---YAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVT---SA-ELLDELAA--REA- 225 (262)
T ss_pred -CC------CCCcc---hHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccccc---CH-HHHHHHHh--cCC-
Confidence 00 00122 666555443 11 122 99999999999874221110 00 00111111 112
Q ss_pred eeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeec
Q 042242 233 VFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAIN 279 (303)
Q Consensus 233 ~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~ 279 (303)
+..+...+|+|.++++++...... ..|+.+.+..
T Consensus 226 ------------~~r~~~p~~va~~~~~l~s~~~~~-itG~~i~v~~ 259 (262)
T PRK07831 226 ------------FGRAAEPWEVANVIAFLASDYSSY-LTGEVVSVSS 259 (262)
T ss_pred ------------CCCCcCHHHHHHHHHHHcCchhcC-cCCceEEeCC
Confidence 112457789999999987654321 3456666654
No 223
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.42 E-value=7.1e-12 Score=103.68 Aligned_cols=104 Identities=16% Similarity=0.211 Sum_probs=79.1
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--ccCCCeEEEEecCCCHHHHHHHHhc-----cCceeEEee
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--IQSSSYCFISCDLLNPLDIKRKLTL-----LEDVTHIFW 101 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~D~~~~~~l~~~~~~-----~~~V~~~~~ 101 (303)
++|+||||+|+||++++++|+ +.|++|++++|++.... ....++.++.+|+.|.++++++++. +|.|+|.++
T Consensus 2 k~vlItG~sg~iG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLL-ERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHH-hCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 689999999999999999999 68999999999876532 1234677889999999988877764 456888865
Q ss_pred cccc------cCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 102 VTWA------SQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 102 ~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
.... .....+....+++|+.++..+++++...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 118 (225)
T PRK08177 81 ISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQ 118 (225)
T ss_pred ccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHh
Confidence 4311 1123344457789999999998887754
No 224
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.41 E-value=6.3e-11 Score=99.79 Aligned_cols=214 Identities=11% Similarity=0.065 Sum_probs=124.5
Q ss_pred CCCCEEEEEcCC--ChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHhc-------
Q 042242 26 DAKNVAVIFGVT--GLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLTL------- 92 (303)
Q Consensus 26 ~~~~~vlVtGat--G~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~~------- 92 (303)
+++|+++||||+ +.||+.++++|+ +.|++|++++|+..... .....+.++++|++|+++++++++.
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la-~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 83 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIK-DQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGK 83 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHH-HCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 346899999999 799999999999 68999999998732111 1123577899999999888776643
Q ss_pred cCceeEEeeccc--------ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCc
Q 042242 93 LEDVTHIFWVTW--------ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFY 164 (303)
Q Consensus 93 ~~~V~~~~~~~~--------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~ 164 (303)
.|.++|.++... ...+.++....+++|+.++..++.++.....+-.+++.+++.... .+.
T Consensus 84 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~------------~~~ 151 (252)
T PRK06079 84 IDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSE------------RAI 151 (252)
T ss_pred CCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcc------------ccC
Confidence 355677655321 122334445578999999988888877652111233333321110 000
Q ss_pred CcCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeC
Q 042242 165 DEECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFG 235 (303)
Q Consensus 165 ~e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
+. ... |+.+|...+ ..... +++..+.||.|-.+......+. ... ...... ..|
T Consensus 152 ----~~--~~~---Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~-~~~--~~~~~~--~~p---- 213 (252)
T PRK06079 152 ----PN--YNV---MGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGH-KDL--LKESDS--RTV---- 213 (252)
T ss_pred ----Cc--chh---hHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCCh-HHH--HHHHHh--cCc----
Confidence 00 112 665555433 11122 9999999999876321111000 010 001111 112
Q ss_pred CchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 236 GTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
...+.+++|+|.++++++...... ..|+++.+.++
T Consensus 214 ---------~~r~~~pedva~~~~~l~s~~~~~-itG~~i~vdgg 248 (252)
T PRK06079 214 ---------DGVGVTIEEVGNTAAFLLSDLSTG-VTGDIIYVDKG 248 (252)
T ss_pred ---------ccCCCCHHHHHHHHHHHhCccccc-ccccEEEeCCc
Confidence 112557789999999988654322 34577766655
No 225
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.41 E-value=7.1e-12 Score=104.90 Aligned_cols=155 Identities=15% Similarity=0.070 Sum_probs=100.1
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc--cCCCeEEEEecCCCHHHHHHHHhc-----------cCc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI--QSSSYCFISCDLLNPLDIKRKLTL-----------LED 95 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~D~~~~~~l~~~~~~-----------~~~ 95 (303)
++++||||+|+||++++++|+ +.|++|++++|+..+... ...++.++++|+.|.+++++++.. .+.
T Consensus 2 ~~vlItGasggiG~~ia~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLL-QPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL 80 (243)
T ss_pred ceEEEecCCcchHHHHHHHHH-hCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence 489999999999999999999 689999999997653221 123578899999999988875543 234
Q ss_pred eeEEeecccc-----cCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccccCCCcccccCCcCcCC
Q 042242 96 VTHIFWVTWA-----SQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC 168 (303)
Q Consensus 96 V~~~~~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~ 168 (303)
++|.++.... ..+.....+.+++|+.++..+.+.+.+.. ....+++++|+...+...
T Consensus 81 ~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------- 144 (243)
T PRK07023 81 LINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAY---------------- 144 (243)
T ss_pred EEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCC----------------
Confidence 7777654321 11234445678999999887777766541 122345555442222110
Q ss_pred CCCCCCccchHHHHHHHHH-----Hh--cCC-cceEEecCCceee
Q 042242 169 PRVSKSNNFYYVLEDLLKE-----KL--AGK-VAWSVHRPGLLLG 205 (303)
Q Consensus 169 ~~~p~~~~~~y~~~k~~~e-----~~--~~~-~~~~ilRp~~v~G 205 (303)
.+... |+.+|...+ +. ... +++..++|+.+-.
T Consensus 145 --~~~~~---Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t 184 (243)
T PRK07023 145 --AGWSV---YCATKAALDHHARAVALDANRALRIVSLAPGVVDT 184 (243)
T ss_pred --CCchH---HHHHHHHHHHHHHHHHhcCCCCcEEEEecCCcccc
Confidence 00222 777666544 11 122 8999999988754
No 226
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.41 E-value=1.4e-10 Score=100.54 Aligned_cols=107 Identities=13% Similarity=0.011 Sum_probs=79.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc------c--cCCCeEEEEecCCCHHHHHHHHhc----
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA------I--QSSSYCFISCDLLNPLDIKRKLTL---- 92 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~------~--~~~~~~~~~~D~~~~~~l~~~~~~---- 92 (303)
...+|+++||||+|+||++++++|+ +.|++|++++|+..... . ...++.++.+|+.|.+++.++++.
T Consensus 9 ~l~~k~~lVTGas~gIG~~ia~~L~-~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~ 87 (306)
T PRK07792 9 DLSGKVAVVTGAAAGLGRAEALGLA-RLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGL 87 (306)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHH-HCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 3457899999999999999999999 68999999987543211 1 123577889999999888777654
Q ss_pred --cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhh
Q 042242 93 --LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILP 132 (303)
Q Consensus 93 --~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~ 132 (303)
+|.++|.++.... ..+..+....+++|+.++..+++++..
T Consensus 88 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~ 133 (306)
T PRK07792 88 GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAA 133 (306)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 5668888665322 223444556889999999999988754
No 227
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.40 E-value=1.2e-11 Score=103.94 Aligned_cols=104 Identities=13% Similarity=0.140 Sum_probs=73.5
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc-c----ccCCCeEEEEecCCCHHHHHHHHhccC---------
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT-A----IQSSSYCFISCDLLNPLDIKRKLTLLE--------- 94 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-~----~~~~~~~~~~~D~~~~~~l~~~~~~~~--------- 94 (303)
|+|+||||+|+||+.++++|+ +.|++|++++|++.+. . ....+++++++|++|.++++..++.+.
T Consensus 2 k~vlItGasggiG~~ia~~l~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~ 80 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLL-EKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVS 80 (251)
T ss_pred cEEEEecCCchHHHHHHHHHH-hcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCC
Confidence 689999999999999999999 6899999999986321 1 112467889999999999888776542
Q ss_pred --ceeEEeeccc-----ccCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 95 --DVTHIFWVTW-----ASQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 95 --~V~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
.++|.++... ...+.....+.+++|+.+...++..+...
T Consensus 81 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 126 (251)
T PRK06924 81 SIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKH 126 (251)
T ss_pred ceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHH
Confidence 1334333211 12234445567888998877776665543
No 228
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.38 E-value=3e-11 Score=100.90 Aligned_cols=107 Identities=15% Similarity=0.139 Sum_probs=75.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc--------cCCCeEEEEecCCC--HHHHHHHH-----
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI--------QSSSYCFISCDLLN--PLDIKRKL----- 90 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~~D~~~--~~~l~~~~----- 90 (303)
+++++|+||||+|+||++++++|+ +.|++|++++|++..... ....+.++.+|+.+ .+++.+++
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~-~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~ 82 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYA-AAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE 82 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHH-HcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence 346899999999999999999999 689999999998754320 12346678899875 33333332
Q ss_pred ---hccCceeEEeeccc-----ccCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 91 ---TLLEDVTHIFWVTW-----ASQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 91 ---~~~~~V~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
..+|.|+|+++... ...+..+..+.+++|+.++..+++++...
T Consensus 83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~ 133 (239)
T PRK08703 83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPL 133 (239)
T ss_pred HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 23466888876422 22233445567899999999998888664
No 229
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.38 E-value=3e-11 Score=99.74 Aligned_cols=104 Identities=19% Similarity=0.244 Sum_probs=79.3
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhc-----cCceeEEeec
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTL-----LEDVTHIFWV 102 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~-----~~~V~~~~~~ 102 (303)
++++||||+|+||++++++|+ ..|++|++++|++.... ....+++++.+|+.+.+.+++++.. .|.|+|+++.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYR-ADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHH-hCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 689999999999999999998 68999999999865432 2223567889999999988876532 4558887654
Q ss_pred ccc------cCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 103 TWA------SQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 103 ~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
... ..+..+....++.|+.++.++++++...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 117 (222)
T PRK06953 81 YGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPL 117 (222)
T ss_pred ccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHh
Confidence 311 1134455568999999999999988764
No 230
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.37 E-value=4.5e-11 Score=101.88 Aligned_cols=106 Identities=11% Similarity=0.010 Sum_probs=80.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------------ccCCCeEEEEecCCCHHHHHHHHhc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------------IQSSSYCFISCDLLNPLDIKRKLTL 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------------~~~~~~~~~~~D~~~~~~l~~~~~~ 92 (303)
++|+++||||+|+||++++++|+ +.|++|++++|+..... ....++.++.+|+++.+++.++++.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~ 83 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAA-RDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK 83 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 45899999999999999999999 68999999999764311 0113577889999999988877763
Q ss_pred -------cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 93 -------LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 93 -------~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
.|.++|.++.... ..+..+....+++|+.++.++++++...
T Consensus 84 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~ 135 (273)
T PRK08278 84 AVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPH 135 (273)
T ss_pred HHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 4568888764322 1223344457889999999999998764
No 231
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.36 E-value=1e-10 Score=97.58 Aligned_cols=99 Identities=14% Similarity=0.158 Sum_probs=72.9
Q ss_pred EEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc-c-----c--cCCCeEEEEecCCCHHHHHHHHhc-------cCc
Q 042242 31 AVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT-A-----I--QSSSYCFISCDLLNPLDIKRKLTL-------LED 95 (303)
Q Consensus 31 vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-~-----~--~~~~~~~~~~D~~~~~~l~~~~~~-------~~~ 95 (303)
|+||||+|+||.+++++|+ +.|++|++++|+.... . . ...++.++++|+.|.+++..+++. .|.
T Consensus 1 vlItGas~giG~~~a~~l~-~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~ 79 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLA-ADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYG 79 (239)
T ss_pred CEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 6899999999999999999 6899999998764321 1 1 124588899999999988777654 244
Q ss_pred eeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHH
Q 042242 96 VTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAI 130 (303)
Q Consensus 96 V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~ 130 (303)
++|.++... ...+..+....++.|+.++.++++++
T Consensus 80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 118 (239)
T TIGR01831 80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPC 118 (239)
T ss_pred EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 666654321 12234455568999999999998875
No 232
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.36 E-value=1.2e-10 Score=98.35 Aligned_cols=107 Identities=9% Similarity=0.022 Sum_probs=77.2
Q ss_pred CCCCEEEEEcCC--ChhHHHHHHHHhhcCCCeEEEEecCCccc---c---ccCCCeEEEEecCCCHHHHHHHHhc-----
Q 042242 26 DAKNVAVIFGVT--GLVGKELARRLISTANWKVYGIARKPEIT---A---IQSSSYCFISCDLLNPLDIKRKLTL----- 92 (303)
Q Consensus 26 ~~~~~vlVtGat--G~iG~~l~~~L~~~~g~~V~~~~r~~~~~---~---~~~~~~~~~~~D~~~~~~l~~~~~~----- 92 (303)
+.+|+++||||+ +.||++++++|+ +.|++|++++|+.... . .+.....++++|++|.++++++++.
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la-~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 86 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFR-ALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEW 86 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHH-HcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHc
Confidence 457899999998 599999999999 6899999999875321 1 1113356789999999988776644
Q ss_pred --cCceeEEeeccc--------ccCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 93 --LEDVTHIFWVTW--------ASQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 93 --~~~V~~~~~~~~--------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
.|.++|.++... .+.+..+..+.+++|+.++..+++.+...
T Consensus 87 g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~ 137 (258)
T PRK07533 87 GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPL 137 (258)
T ss_pred CCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 355777765421 11233445568999999999999887654
No 233
>PRK07578 short chain dehydrogenase; Provisional
Probab=99.36 E-value=8.4e-11 Score=95.36 Aligned_cols=93 Identities=13% Similarity=0.132 Sum_probs=72.0
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhc---cCceeEEeecccc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTL---LEDVTHIFWVTWA 105 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~---~~~V~~~~~~~~~ 105 (303)
++++||||+|.||++++++|. +. ++|++++|++. .+++|+.|.++++++++. +|.++|.++....
T Consensus 1 ~~vlItGas~giG~~la~~l~-~~-~~vi~~~r~~~----------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~ 68 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELS-KR-HEVITAGRSSG----------DVQVDITDPASIRALFEKVGKVDAVVSAAGKVHF 68 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHH-hc-CcEEEEecCCC----------ceEecCCChHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 379999999999999999998 45 89999999753 357999999999888874 4557777654321
Q ss_pred ----cCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 106 ----SQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 106 ----~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
.....+..+.+++|+.++.++++++...
T Consensus 69 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 100 (199)
T PRK07578 69 APLAEMTDEDFNVGLQSKLMGQVNLVLIGQHY 100 (199)
T ss_pred CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1233444567899999999999988764
No 234
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.34 E-value=5.2e-11 Score=101.47 Aligned_cols=103 Identities=12% Similarity=0.094 Sum_probs=76.0
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----cc---CCCeEEEEecCCCHHHHHHHHhc-------c
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----IQ---SSSYCFISCDLLNPLDIKRKLTL-------L 93 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~---~~~~~~~~~D~~~~~~l~~~~~~-------~ 93 (303)
|+++||||+|.||.++++.|+ +.|++|++++|++.... .. ...+.++++|+.|.+++.+++.. +
T Consensus 1 k~vlItGas~giG~~la~~la-~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLA-AQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSM 79 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 479999999999999999999 68999999998764421 01 11244578999999887766654 4
Q ss_pred CceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhh
Q 042242 94 EDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILP 132 (303)
Q Consensus 94 ~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~ 132 (303)
|.++|+++... ...+..+....+++|+.++..+++++..
T Consensus 80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 122 (272)
T PRK07832 80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVP 122 (272)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 66888865422 1223444456899999999999998764
No 235
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=99.34 E-value=2.1e-10 Score=97.48 Aligned_cols=104 Identities=14% Similarity=0.133 Sum_probs=71.1
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc-cc-----cc---CCCeEEEEecCCCHHHH----HHHHh----
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI-TA-----IQ---SSSYCFISCDLLNPLDI----KRKLT---- 91 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-~~-----~~---~~~~~~~~~D~~~~~~l----~~~~~---- 91 (303)
++++||||+|+||++++++|+ +.|++|++++|+... .. .. ...+.++.+|++|.+++ ++.++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~-~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~ 80 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALH-QEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFR 80 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHH-hCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence 589999999999999999999 689999998765422 11 11 12456788999998754 33332
Q ss_pred ---ccCceeEEeeccccc----CCh-----------HHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 92 ---LLEDVTHIFWVTWAS----QFA-----------SDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 92 ---~~~~V~~~~~~~~~~----~~~-----------~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
.+|.++|.++..... ... ....+.+++|+.++..+++++...
T Consensus 81 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 140 (267)
T TIGR02685 81 AFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQR 140 (267)
T ss_pred ccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 356688887542211 111 123357899999999998876654
No 236
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.34 E-value=2.4e-11 Score=102.88 Aligned_cols=106 Identities=12% Similarity=0.079 Sum_probs=78.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-c---cCCCeEEEEecCCCHHHHHHHHhc-------cCc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-I---QSSSYCFISCDLLNPLDIKRKLTL-------LED 95 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~---~~~~~~~~~~D~~~~~~l~~~~~~-------~~~ 95 (303)
++|+++||||+|+||++++++|+ +.|++|++++|+..... . ...++.++.+|+.|.+++.++++. +|.
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 82 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFV-AEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC 82 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 46899999999999999999999 68999999999865432 1 123577889999999887776653 456
Q ss_pred eeEEeecccc-----cCCh----HHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 96 VTHIFWVTWA-----SQFA----SDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 96 V~~~~~~~~~-----~~~~----~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
++|+++.... .... ....+.+++|+.++..+++++...
T Consensus 83 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 129 (262)
T TIGR03325 83 LIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPA 129 (262)
T ss_pred EEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHH
Confidence 8888753211 1111 123457899999999999998764
No 237
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.34 E-value=1.8e-10 Score=97.99 Aligned_cols=214 Identities=10% Similarity=0.061 Sum_probs=122.1
Q ss_pred CCCEEEEEcCCC--hhHHHHHHHHhhcCCCeEEEEecCCccc---c-c-c-CCCeEEEEecCCCHHHHHHHHhc------
Q 042242 27 AKNVAVIFGVTG--LVGKELARRLISTANWKVYGIARKPEIT---A-I-Q-SSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 27 ~~~~vlVtGatG--~iG~~l~~~L~~~~g~~V~~~~r~~~~~---~-~-~-~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
++|++|||||++ .||+.++++|+ +.|++|++++|+.... . . . ......+++|++|.++++++++.
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la-~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLA-AQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG 84 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHH-hCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 468999999997 99999999999 6899999998864211 0 1 1 12234678999999988776654
Q ss_pred -cCceeEEeeccc--------ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCC
Q 042242 93 -LEDVTHIFWVTW--------ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRF 163 (303)
Q Consensus 93 -~~~V~~~~~~~~--------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~ 163 (303)
+|.++|.++... ...+..+....+++|+.++..+++++......-..++.+++.... .+
T Consensus 85 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~------------~~ 152 (271)
T PRK06505 85 KLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGST------------RV 152 (271)
T ss_pred CCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCcc------------cc
Confidence 345777665422 122334445678999999998888776542111233333321110 00
Q ss_pred cCcCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee
Q 042242 164 YDEECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 164 ~~e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
. +. ..+ |..+|.... ..... +++..+.||.+-.+... ... ..........+ ..|+
T Consensus 153 ~----~~--~~~---Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~-~~~--~~~~~~~~~~~--~~p~-- 216 (271)
T PRK06505 153 M----PN--YNV---MGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGA-GIG--DARAIFSYQQR--NSPL-- 216 (271)
T ss_pred C----Cc--cch---hhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccc-cCc--chHHHHHHHhh--cCCc--
Confidence 0 00 112 555544332 11122 99999999998763211 100 00000000100 1121
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+ .+..++|+|.++++++...... ..|+.+.+.++.
T Consensus 217 -~----------r~~~peeva~~~~fL~s~~~~~-itG~~i~vdgG~ 251 (271)
T PRK06505 217 -R----------RTVTIDEVGGSALYLLSDLSSG-VTGEIHFVDSGY 251 (271)
T ss_pred -c----------ccCCHHHHHHHHHHHhCccccc-cCceEEeecCCc
Confidence 1 1446789999999987643321 345777777764
No 238
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.33 E-value=1.9e-10 Score=105.04 Aligned_cols=107 Identities=18% Similarity=0.076 Sum_probs=79.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHhc-------cC
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLTL-------LE 94 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~~-------~~ 94 (303)
..+++++||||+|.||..++++|. ..|++|++++|+..... ....+..++.+|++|.++++++++. +|
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~-~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 286 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLA-RDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLD 286 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHH-HCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCC
Confidence 356899999999999999999998 68999999998543211 1122456788999999988776653 46
Q ss_pred ceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 95 DVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 95 ~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
.|+|.++.... ..+.......+++|+.++.++++++...
T Consensus 287 ~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~ 329 (450)
T PRK08261 287 IVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAA 329 (450)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHh
Confidence 68888764321 1233444458899999999999998763
No 239
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.33 E-value=5.5e-11 Score=113.79 Aligned_cols=159 Identities=17% Similarity=0.207 Sum_probs=107.4
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-------ccCCCeEEEEecCCCHHHHHHHHhc-----
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-------IQSSSYCFISCDLLNPLDIKRKLTL----- 92 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~~----- 92 (303)
.+++|+++||||+|+||++++++|+ ..|++|++++|++.... ....++.++.+|+.|.++++++++.
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 446 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVA-EAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH 446 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 3457899999999999999999999 68999999999875432 1124578899999999998887763
Q ss_pred --cCceeEEeecccccC------ChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccC
Q 042242 93 --LEDVTHIFWVTWASQ------FASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVR 162 (303)
Q Consensus 93 --~~~V~~~~~~~~~~~------~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~ 162 (303)
+|.++|.++...... ...+....+++|+.++.+++.++... .....+++.+++...|...
T Consensus 447 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 516 (657)
T PRK07201 447 GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNA---------- 516 (657)
T ss_pred CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC----------
Confidence 566888876432111 12344568899999998887776543 1123355555543333111
Q ss_pred CcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeec
Q 042242 163 FYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGS 206 (303)
Q Consensus 163 ~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~ 206 (303)
+. ..+ |+.+|...+ +. .+ +++++++|+.|..+
T Consensus 517 ------~~--~~~---Y~~sK~a~~~~~~~la~e~~~~~-i~v~~v~pg~v~T~ 558 (657)
T PRK07201 517 ------PR--FSA---YVASKAALDAFSDVAASETLSDG-ITFTTIHMPLVRTP 558 (657)
T ss_pred ------CC--cch---HHHHHHHHHHHHHHHHHHHHhhC-CcEEEEECCcCccc
Confidence 00 123 676665544 11 23 99999999998764
No 240
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=99.32 E-value=6.1e-10 Score=92.69 Aligned_cols=104 Identities=15% Similarity=0.127 Sum_probs=73.5
Q ss_pred CEEEEEcCCChhHHHHHHHHhhc-CCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHh---ccCceeEEeeccc
Q 042242 29 NVAVIFGVTGLVGKELARRLIST-ANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLT---LLEDVTHIFWVTW 104 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~---~~~~V~~~~~~~~ 104 (303)
|+|+||||+|+||++++++|++. .++.|....|+.... ....++.++++|+++.++++++.+ +.|.++|+++...
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~~~ 79 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD-FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGMLH 79 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc-cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCcccc
Confidence 48999999999999999999843 246676666654332 223567889999999988776544 4566888876542
Q ss_pred cc----------CChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 105 AS----------QFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 105 ~~----------~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
.. .+.......+++|+.+...+.+.+...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~ 118 (235)
T PRK09009 80 TQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPK 118 (235)
T ss_pred ccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhh
Confidence 11 112233357899999998888887764
No 241
>PRK05855 short chain dehydrogenase; Validated
Probab=99.32 E-value=5.4e-11 Score=112.10 Aligned_cols=159 Identities=13% Similarity=0.064 Sum_probs=107.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHhc-----
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLTL----- 92 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~----- 92 (303)
.+..++++||||+|+||++++++|. ..|++|++++|+..+.. . ...++.++.+|++|.+++.++++.
T Consensus 312 ~~~~~~~lv~G~s~giG~~~a~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 312 PFSGKLVVVTGAGSGIGRETALAFA-REGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH 390 (582)
T ss_pred cCCCCEEEEECCcCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 4456899999999999999999999 68999999999865432 1 123578899999999998887765
Q ss_pred --cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc-c--CCccEEEEeecccccccccCCCcccccCC
Q 042242 93 --LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR-A--KALKHVSLQTGMKHYVSLQGLPEEKQVRF 163 (303)
Q Consensus 93 --~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~--~~~~~~~~~s~~~~y~~~~~~~g~~~~~~ 163 (303)
+|.++|.++.... ..+..+....+++|+.++.++++++... . ..-.+++.+|+...|....
T Consensus 391 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------- 460 (582)
T PRK05855 391 GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSR---------- 460 (582)
T ss_pred CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC----------
Confidence 4568888765322 2234455568899999999988876554 1 1112455555433332110
Q ss_pred cCcCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceee
Q 042242 164 YDEECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLG 205 (303)
Q Consensus 164 ~~e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G 205 (303)
...+ |+.+|...+ ..... +++++++||.|-.
T Consensus 461 --------~~~~---Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t 500 (582)
T PRK05855 461 --------SLPA---YATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDT 500 (582)
T ss_pred --------CCcH---HHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcc
Confidence 0223 777666443 11122 9999999998865
No 242
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.32 E-value=1.8e-10 Score=98.85 Aligned_cols=105 Identities=10% Similarity=0.002 Sum_probs=76.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCC---------cccc-----c--cCCCeEEEEecCCCHHHHHHHH
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKP---------EITA-----I--QSSSYCFISCDLLNPLDIKRKL 90 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~---------~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~ 90 (303)
++|+++||||++.||+.++++|+ +.|++|++++|+. .... . ...++.++.+|++|.+++.+++
T Consensus 5 ~~k~~lITGas~GIG~aia~~la-~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 5 DGRVVIVTGAGGGIGRAHALAFA-AEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 46899999999999999999999 6899999988764 1111 1 1234678899999998887766
Q ss_pred hc-------cCceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhh
Q 042242 91 TL-------LEDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILP 132 (303)
Q Consensus 91 ~~-------~~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~ 132 (303)
+. +|.++|.++... ......+..+.+++|+.++..+++++..
T Consensus 84 ~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 136 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAA 136 (286)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHH
Confidence 43 345777765432 1223444556899999999888887754
No 243
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=99.32 E-value=2.5e-10 Score=96.49 Aligned_cols=215 Identities=13% Similarity=0.090 Sum_probs=123.4
Q ss_pred CCCCEEEEEcCC--ChhHHHHHHHHhhcCCCeEEEEecCCccc------c-c--cCCCeEEEEecCCCHHHHHHHHhc--
Q 042242 26 DAKNVAVIFGVT--GLVGKELARRLISTANWKVYGIARKPEIT------A-I--QSSSYCFISCDLLNPLDIKRKLTL-- 92 (303)
Q Consensus 26 ~~~~~vlVtGat--G~iG~~l~~~L~~~~g~~V~~~~r~~~~~------~-~--~~~~~~~~~~D~~~~~~l~~~~~~-- 92 (303)
+++|+++||||+ +.||++++++|+ +.|++|++..|+.... . . ....+.++++|++|.++++++++.
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 82 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLH-AAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIK 82 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHH-HCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHH
Confidence 356899999986 799999999999 6899998887643321 0 1 112456789999999988776654
Q ss_pred -----cCceeEEeeccc--------ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCccc
Q 042242 93 -----LEDVTHIFWVTW--------ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEK 159 (303)
Q Consensus 93 -----~~~V~~~~~~~~--------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~ 159 (303)
.|.++|.++... ...+..+..+.+++|+.++..+++++...-..-.+++.+++....
T Consensus 83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~---------- 152 (258)
T PRK07370 83 QKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGV---------- 152 (258)
T ss_pred HHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccc----------
Confidence 345777765321 112234445688999999999888876542111344444331110
Q ss_pred ccCCcCcCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCC
Q 042242 160 QVRFYDEECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNL 230 (303)
Q Consensus 160 ~~~~~~e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (303)
.+. +. ... |+.+|...+ ..... +++..+.||.+-.+........ ... ...+.. ..
T Consensus 153 --~~~----~~--~~~---Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~-~~~--~~~~~~--~~ 216 (258)
T PRK07370 153 --RAI----PN--YNV---MGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGI-LDM--IHHVEE--KA 216 (258)
T ss_pred --cCC----cc--cch---hhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccc-hhh--hhhhhh--cC
Confidence 000 00 112 666555443 11223 9999999998876321100000 000 000000 11
Q ss_pred ceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 231 PFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 231 ~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
| +..+...+|+|.++++++..+... ..|+.+.+.++.
T Consensus 217 p-------------~~r~~~~~dva~~~~fl~s~~~~~-~tG~~i~vdgg~ 253 (258)
T PRK07370 217 P-------------LRRTVTQTEVGNTAAFLLSDLASG-ITGQTIYVDAGY 253 (258)
T ss_pred C-------------cCcCCCHHHHHHHHHHHhChhhcc-ccCcEEEECCcc
Confidence 1 112556789999998887644322 345777676653
No 244
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.32 E-value=5.7e-11 Score=98.16 Aligned_cols=103 Identities=13% Similarity=0.191 Sum_probs=78.2
Q ss_pred EEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--ccCCCeEEEEecCCCHHHHHHHHhc----cCceeEEeecc
Q 042242 30 VAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--IQSSSYCFISCDLLNPLDIKRKLTL----LEDVTHIFWVT 103 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~D~~~~~~l~~~~~~----~~~V~~~~~~~ 103 (303)
+++||||+|.||+++++.|+ +.|++|++++|+..+.. ....+++++++|+.|.++++++++. .|.++|+++..
T Consensus 2 ~vlItGas~giG~~ia~~l~-~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~~ 80 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFR-NDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAPS 80 (223)
T ss_pred eEEEEeCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCcc
Confidence 69999999999999999999 68999999999865432 1122467889999999998887763 56688876532
Q ss_pred cc---------cCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 104 WA---------SQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 104 ~~---------~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
+. .....+..+.+++|+.++..+++++...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 119 (223)
T PRK05884 81 WDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDH 119 (223)
T ss_pred ccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 0123344568999999999999998765
No 245
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.31 E-value=3.5e-10 Score=95.64 Aligned_cols=100 Identities=13% Similarity=0.035 Sum_probs=70.0
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c-cCCCeEEEEecCCCHHHHHHHHhc-------cCc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I-QSSSYCFISCDLLNPLDIKRKLTL-------LED 95 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~-~~~~~~~~~~D~~~~~~l~~~~~~-------~~~ 95 (303)
++++||||+|.||+.++++|+ +.|++|++++|++.... . ...++.++++|++|.++++++++. +|.
T Consensus 1 m~vlItGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~ 79 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELL-KKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDA 79 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 479999999999999999999 68999999999865421 1 123577899999999988877753 455
Q ss_pred eeEEeeccc------ccCChHHHHHHHHHHHHHHHHHHHH
Q 042242 96 VTHIFWVTW------ASQFASDMHKCCEQNKAMMCNALNA 129 (303)
Q Consensus 96 V~~~~~~~~------~~~~~~~~~~~~~~n~~~~~~ll~~ 129 (303)
++|.++... ......+..+.+.+|+.+...+...
T Consensus 80 li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 119 (259)
T PRK08340 80 LVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTL 119 (259)
T ss_pred EEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHH
Confidence 777765421 1122233334567777766555444
No 246
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.31 E-value=2.8e-10 Score=96.18 Aligned_cols=106 Identities=12% Similarity=0.061 Sum_probs=79.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----cc---CCCeEEEEecCCCHHHHHHHHhc---cCc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----IQ---SSSYCFISCDLLNPLDIKRKLTL---LED 95 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~---~~~~~~~~~D~~~~~~l~~~~~~---~~~ 95 (303)
.+|+++|||++|.||+.+++.|+ ..|++|++++|++.+.. .. ..++.++.+|++|.+++.++++. +|.
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~ 84 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFA-AEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDI 84 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCE
Confidence 46899999999999999999999 68999999999865432 11 23577889999999998887764 445
Q ss_pred eeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 96 VTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 96 V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
++|+++... ......+....+++|+.+...+++++...
T Consensus 85 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 126 (259)
T PRK06125 85 LVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPR 126 (259)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 777765421 12233444557899999998888887544
No 247
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.31 E-value=8.5e-11 Score=98.64 Aligned_cols=107 Identities=20% Similarity=0.169 Sum_probs=75.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c---cCCCeEEEEecCC--CHHHHHHHH----
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I---QSSSYCFISCDLL--NPLDIKRKL---- 90 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~---~~~~~~~~~~D~~--~~~~l~~~~---- 90 (303)
...+++|+||||+|+||.+++++|+ +.|++|++++|+..+.. . ...++.++.+|++ +.+++.+++
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~-~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYA-RHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE 87 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHH-HCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence 3457899999999999999999999 58999999999865421 1 1235667778886 455444433
Q ss_pred ---hccCceeEEeeccc-----ccCChHHHHHHHHHHHHHHHHHHHHHhh
Q 042242 91 ---TLLEDVTHIFWVTW-----ASQFASDMHKCCEQNKAMMCNALNAILP 132 (303)
Q Consensus 91 ---~~~~~V~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~ 132 (303)
..+|.|+|.++... .........+.+++|+.++.++++++..
T Consensus 88 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~ 137 (247)
T PRK08945 88 EQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLP 137 (247)
T ss_pred HHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHH
Confidence 24566888865421 1223444556899999999888888764
No 248
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=99.31 E-value=2.1e-11 Score=96.94 Aligned_cols=244 Identities=14% Similarity=0.073 Sum_probs=140.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCe-EEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhc--cCceeEEe-ec
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWK-VYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTL--LEDVTHIF-WV 102 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~--~~~V~~~~-~~ 102 (303)
...+|||||+-|.+|..++..|...-|-+ |+..+-.++.... ...-.++-.|+.|...+++.+-. +|..+|.. ..
T Consensus 43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V-~~~GPyIy~DILD~K~L~eIVVn~RIdWL~HfSALL 121 (366)
T KOG2774|consen 43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANV-TDVGPYIYLDILDQKSLEEIVVNKRIDWLVHFSALL 121 (366)
T ss_pred CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhh-cccCCchhhhhhccccHHHhhcccccceeeeHHHHH
Confidence 35699999999999999999997445555 7777655443221 12223566899998888887743 34467762 11
Q ss_pred ccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHH
Q 042242 103 TWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLE 182 (303)
Q Consensus 103 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~ 182 (303)
+...+..-.. +.++|+.|..|+++.++++.-++..-|++ | .| |. ..|.....-..-..|...|+.+
T Consensus 122 SAvGE~NVpL--A~~VNI~GvHNil~vAa~~kL~iFVPSTI-G--AF-------GP--tSPRNPTPdltIQRPRTIYGVS 187 (366)
T KOG2774|consen 122 SAVGETNVPL--ALQVNIRGVHNILQVAAKHKLKVFVPSTI-G--AF-------GP--TSPRNPTPDLTIQRPRTIYGVS 187 (366)
T ss_pred HHhcccCCce--eeeecchhhhHHHHHHHHcCeeEeecccc-c--cc-------CC--CCCCCCCCCeeeecCceeechh
Confidence 1122221122 57899999999999999873222111221 1 22 11 1111111111113456779998
Q ss_pred HHHHH----Hhc-CC-cceEEecCCceeecCCCC--ccchhhHHHHHHH-HhhhCCCceeeCCchhhhhhhcccCccHHH
Q 042242 183 DLLKE----KLA-GK-VAWSVHRPGLLLGSSHRS--LYNFLGCLCVYGA-VCKHLNLPFVFGGTREIWEEYCLDGSDSRL 253 (303)
Q Consensus 183 k~~~e----~~~-~~-~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 253 (303)
|.-+| +.. .. +.+.++|.+.++...+-. ..++ ..+.+.. +.+ |+- .++-.+ ...+.+-...|
T Consensus 188 KVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdy--a~A~f~~Al~~--gk~-tCylrp----dtrlpmmy~~d 258 (366)
T KOG2774|consen 188 KVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDY--AIAIFYDALQK--GKH-TCYLRP----DTRLPMMYDTD 258 (366)
T ss_pred HHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchh--HHHHHHHHHHc--CCc-ccccCC----CccCceeehHH
Confidence 76555 332 33 889999998888742211 1122 2222222 322 211 111111 33344556667
Q ss_pred HHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHh
Q 042242 254 VAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKF 296 (303)
Q Consensus 254 ~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~ 296 (303)
+-++++..+..+... -..++||+++ -..|-.|++..+.+.+
T Consensus 259 c~~~~~~~~~a~~~~-lkrr~ynvt~-~sftpee~~~~~~~~~ 299 (366)
T KOG2774|consen 259 CMASVIQLLAADSQS-LKRRTYNVTG-FSFTPEEIADAIRRVM 299 (366)
T ss_pred HHHHHHHHHhCCHHH-hhhheeeece-eccCHHHHHHHHHhhC
Confidence 777888776555432 2237999987 5678999999998865
No 249
>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]
Probab=99.31 E-value=3.1e-11 Score=95.39 Aligned_cols=239 Identities=13% Similarity=0.079 Sum_probs=141.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHH-----HHhhcCC----CeEEEEecCCccccccCCCeEEEEecCCCHH-HHHHHHhccC
Q 042242 25 VDAKNVAVIFGVTGLVGKELAR-----RLISTAN----WKVYGIARKPEITAIQSSSYCFISCDLLNPL-DIKRKLTLLE 94 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~-----~L~~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~-~l~~~~~~~~ 94 (303)
+.|+++.++-+.+|+|+..|.. ++- +.+ |+|++++|.+.+.. +++-..|..-.. ++.+.. +
T Consensus 9 ~~~sr~a~~~~~~g~i~~nl~~~~~~~H~t-~~~~a~~h~vtv~sR~pg~~r-----itw~el~~~Gip~sc~a~v---n 79 (315)
T KOG3019|consen 9 SGKSRDAVSNWSNGIIRENLGSETSCCHDT-NVHSADNHAVTVLSRSPGKAR-----ITWPELDFPGIPISCVAGV---N 79 (315)
T ss_pred CCccccCCCCccccchhccccCcccccccC-CCCcccccceEEEecCCCCcc-----cccchhcCCCCceehHHHH---h
Confidence 4466778888999999988876 443 333 89999999987643 111111111100 111111 1
Q ss_pred ceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCC
Q 042242 95 DVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKS 174 (303)
Q Consensus 95 ~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~ 174 (303)
.+.+.+.......+..-..+.....+..+..+.+++..+-...+-++..+|..+|..+. ..-++|+++.. ..
T Consensus 80 a~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~-------s~eY~e~~~~q-gf 151 (315)
T KOG3019|consen 80 AVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSE-------SQEYSEKIVHQ-GF 151 (315)
T ss_pred hhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEecccc-------ccccccccccC-Ch
Confidence 11111111111112222223444455567888888887633334556667777885442 23366766543 22
Q ss_pred ccchHHH---HHHHHHHh-cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCc
Q 042242 175 NNFYYVL---EDLLKEKL-AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGS 249 (303)
Q Consensus 175 ~~~~y~~---~k~~~e~~-~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 249 (303)
. |.. .++..... .++ .+.+++|.|.|.|.+.+....++..+ . -+.|-| .-.| .++..++
T Consensus 152 d---~~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF---~---~g~GGP-lGsG------~Q~fpWI 215 (315)
T KOG3019|consen 152 D---ILSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPF---Q---MGAGGP-LGSG------QQWFPWI 215 (315)
T ss_pred H---HHHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhh---h---hccCCc-CCCC------Ceeeeee
Confidence 2 332 13333222 233 99999999999997655322222221 1 112445 2233 6778889
Q ss_pred cHHHHHHHHHHHhcCcCCcCCCCceEEeecCCCccHHhhHHHHHHHhcccC
Q 042242 250 DSRLVAEQHIWVATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKV 300 (303)
Q Consensus 250 ~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~~s~~e~~~~i~~~~g~~~ 300 (303)
|++|++..+.++++++... ++.|-+.+++.+..|+.+.++++++++.
T Consensus 216 Hv~DL~~li~~ale~~~v~----GViNgvAP~~~~n~Ef~q~lg~aL~Rp~ 262 (315)
T KOG3019|consen 216 HVDDLVNLIYEALENPSVK----GVINGVAPNPVRNGEFCQQLGSALSRPS 262 (315)
T ss_pred ehHHHHHHHHHHHhcCCCC----ceecccCCCccchHHHHHHHHHHhCCCc
Confidence 9999999999999998765 4899999999999999999999999874
No 250
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.30 E-value=5.1e-10 Score=94.69 Aligned_cols=215 Identities=8% Similarity=0.043 Sum_probs=121.1
Q ss_pred CCCCEEEEEcCCC--hhHHHHHHHHhhcCCCeEEEEecCCccc---c-c-cC-CCeEEEEecCCCHHHHHHHHhc-----
Q 042242 26 DAKNVAVIFGVTG--LVGKELARRLISTANWKVYGIARKPEIT---A-I-QS-SSYCFISCDLLNPLDIKRKLTL----- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG--~iG~~l~~~L~~~~g~~V~~~~r~~~~~---~-~-~~-~~~~~~~~D~~~~~~l~~~~~~----- 92 (303)
+++|+++||||++ .||+++++.|+ +.|++|++.+|+.... . . .. ....++++|++|.++++++++.
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la-~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAK-KHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKW 84 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHH-HcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHc
Confidence 3468999999997 89999999998 6899999888863211 1 1 11 2234578999999988777753
Q ss_pred --cCceeEEeeccc--------ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccC
Q 042242 93 --LEDVTHIFWVTW--------ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVR 162 (303)
Q Consensus 93 --~~~V~~~~~~~~--------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~ 162 (303)
+|.++|.++... .+.+..+..+.+++|+.++..+++++.....+-.+++.+++.... .
T Consensus 85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~------------~ 152 (260)
T PRK06603 85 GSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAE------------K 152 (260)
T ss_pred CCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccc------------c
Confidence 344566544321 122344555688999999999888765442111233333321110 0
Q ss_pred CcCcCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCcee
Q 042242 163 FYDEECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 163 ~~~e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
+. +. ... |+.+|...+ ..... +++..+.||.+-.+........ .. ....... ..|
T Consensus 153 ~~----~~--~~~---Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~-~~--~~~~~~~--~~p-- 216 (260)
T PRK06603 153 VI----PN--YNV---MGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDF-ST--MLKSHAA--TAP-- 216 (260)
T ss_pred CC----Cc--ccc---hhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCc-HH--HHHHHHh--cCC--
Confidence 00 00 112 555544332 11222 9999999998865311100000 00 0000111 112
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+-.+...+|+|.++++++...... ..|+.+.+.++.
T Consensus 217 -----------~~r~~~pedva~~~~~L~s~~~~~-itG~~i~vdgG~ 252 (260)
T PRK06603 217 -----------LKRNTTQEDVGGAAVYLFSELSKG-VTGEIHYVDCGY 252 (260)
T ss_pred -----------cCCCCCHHHHHHHHHHHhCccccc-CcceEEEeCCcc
Confidence 112457789999999988653321 345777776664
No 251
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.30 E-value=4.3e-10 Score=95.76 Aligned_cols=215 Identities=11% Similarity=0.045 Sum_probs=123.7
Q ss_pred CCCEEEEEcCC--ChhHHHHHHHHhhcCCCeEEEEecCCcc---cc---ccCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 27 AKNVAVIFGVT--GLVGKELARRLISTANWKVYGIARKPEI---TA---IQSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 27 ~~~~vlVtGat--G~iG~~l~~~L~~~~g~~V~~~~r~~~~---~~---~~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
.+|+++||||+ +.||.++++.|+ +.|++|+++.|+... .. ........+++|++|.++++++++.
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la-~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 87 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACR-AAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG 87 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHH-HCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence 46899999997 899999999999 689999888876321 11 1112355789999999988877654
Q ss_pred -cCceeEEeeccc--------ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCC
Q 042242 93 -LEDVTHIFWVTW--------ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRF 163 (303)
Q Consensus 93 -~~~V~~~~~~~~--------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~ 163 (303)
.|.++|.++... ...+..+....+++|+.++..+++++...-.+-..++.+++...+ .+
T Consensus 88 ~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~------------~~ 155 (272)
T PRK08159 88 KLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAE------------KV 155 (272)
T ss_pred CCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccc------------cC
Confidence 344667665432 122334455688999999999998877652111233333321010 00
Q ss_pred cCcCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceee
Q 042242 164 YDEECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVF 234 (303)
Q Consensus 164 ~~e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
. |. ... |+.+|.... ..... +++..+.||.+..+... ... .......... ...|
T Consensus 156 ~----p~--~~~---Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~-~~~---~~~~~~~~~~-~~~p--- 218 (272)
T PRK08159 156 M----PH--YNV---MGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAAS-GIG---DFRYILKWNE-YNAP--- 218 (272)
T ss_pred C----Cc--chh---hhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHh-cCC---cchHHHHHHH-hCCc---
Confidence 0 00 112 555554332 11223 99999999988652110 000 0000000000 0112
Q ss_pred CCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 235 GGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
+..+..++|+|.++++++...... ..|..+.+.++..
T Consensus 219 ----------~~r~~~peevA~~~~~L~s~~~~~-itG~~i~vdgG~~ 255 (272)
T PRK08159 219 ----------LRRTVTIEEVGDSALYLLSDLSRG-VTGEVHHVDSGYH 255 (272)
T ss_pred ----------ccccCCHHHHHHHHHHHhCccccC-ccceEEEECCCce
Confidence 112457789999999988654322 4457787777743
No 252
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.30 E-value=5.2e-10 Score=94.70 Aligned_cols=214 Identities=10% Similarity=0.062 Sum_probs=121.3
Q ss_pred CCCEEEEEcCCC--hhHHHHHHHHhhcCCCeEEEEecCCcc---cc---ccCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 27 AKNVAVIFGVTG--LVGKELARRLISTANWKVYGIARKPEI---TA---IQSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 27 ~~~~vlVtGatG--~iG~~l~~~L~~~~g~~V~~~~r~~~~---~~---~~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
++|+++||||++ .||+++++.|+ +.|++|++++|+... .. ...+...++.+|++|.++++.+++.
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la-~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 83 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMH-REGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP 83 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHH-HCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence 468999999985 89999999999 689999988886321 11 1123456788999999988877754
Q ss_pred -cCceeEEeecccc---------cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccC
Q 042242 93 -LEDVTHIFWVTWA---------SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVR 162 (303)
Q Consensus 93 -~~~V~~~~~~~~~---------~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~ 162 (303)
+|.++|.++.... ..+..+....+++|+.++..+.+++.....+-..++.+++...+ .
T Consensus 84 ~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~------------~ 151 (262)
T PRK07984 84 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE------------R 151 (262)
T ss_pred CCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCC------------C
Confidence 3457777654221 11233344578899999888888765431111233333321110 0
Q ss_pred CcCcCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCcee
Q 042242 163 FYDEECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFV 233 (303)
Q Consensus 163 ~~~e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
+. +. ... |+.+|...+ ..... +++..+.|+.+..+........ .. ....... ..|
T Consensus 152 ~~----~~--~~~---Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~-~~--~~~~~~~--~~p-- 215 (262)
T PRK07984 152 AI----PN--YNV---MGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDF-RK--MLAHCEA--VTP-- 215 (262)
T ss_pred CC----CC--cch---hHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCch-HH--HHHHHHH--cCC--
Confidence 00 00 112 666555443 11222 9999999988865311100000 00 0000110 111
Q ss_pred eCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 234 FGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
...+.+++|+|.++++++...... ..|..+.+.++.
T Consensus 216 -----------~~r~~~pedva~~~~~L~s~~~~~-itG~~i~vdgg~ 251 (262)
T PRK07984 216 -----------IRRTVTIEDVGNSAAFLCSDLSAG-ISGEVVHVDGGF 251 (262)
T ss_pred -----------CcCCCCHHHHHHHHHHHcCccccc-ccCcEEEECCCc
Confidence 112567789999999987654322 345777776653
No 253
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.30 E-value=2.9e-10 Score=96.89 Aligned_cols=106 Identities=13% Similarity=0.073 Sum_probs=75.6
Q ss_pred CCCEEEEEcCC--ChhHHHHHHHHhhcCCCeEEEEecCCc---ccc-c--cCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 27 AKNVAVIFGVT--GLVGKELARRLISTANWKVYGIARKPE---ITA-I--QSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 27 ~~~~vlVtGat--G~iG~~l~~~L~~~~g~~V~~~~r~~~---~~~-~--~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
.+|+++||||+ +.||+.+++.|+ +.|++|++++|+.. ... . +...-.++++|++|.++++++++.
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la-~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g 82 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACF-EQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLG 82 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHH-HCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 46899999997 799999999999 68999999988742 111 1 111115788999999988776654
Q ss_pred -cCceeEEeeccc--------ccCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 93 -LEDVTHIFWVTW--------ASQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 93 -~~~V~~~~~~~~--------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
+|.++|.++... ...+..+....+++|+.++..+.+++...
T Consensus 83 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~ 132 (274)
T PRK08415 83 KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPL 132 (274)
T ss_pred CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 345677765421 12233445568999999999988887765
No 254
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.30 E-value=9.2e-10 Score=92.96 Aligned_cols=214 Identities=11% Similarity=0.091 Sum_probs=121.6
Q ss_pred CCCCEEEEEcCC--ChhHHHHHHHHhhcCCCeEEEEecCCccc---c-----ccCCCeEEEEecCCCHHHHHHHHhc---
Q 042242 26 DAKNVAVIFGVT--GLVGKELARRLISTANWKVYGIARKPEIT---A-----IQSSSYCFISCDLLNPLDIKRKLTL--- 92 (303)
Q Consensus 26 ~~~~~vlVtGat--G~iG~~l~~~L~~~~g~~V~~~~r~~~~~---~-----~~~~~~~~~~~D~~~~~~l~~~~~~--- 92 (303)
+.+|+++||||+ +.||++++++|+ +.|++|++++|+.... . ....++.++++|++|.++++++++.
T Consensus 5 ~~~k~~lItGa~~s~GIG~aia~~la-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 83 (257)
T PRK08594 5 LEGKTYVVMGVANKRSIAWGIARSLH-NAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKE 83 (257)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHH-HCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence 356899999997 899999999999 6899999988753211 1 1123577889999999988776653
Q ss_pred ----cCceeEEeeccc--------ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccc
Q 042242 93 ----LEDVTHIFWVTW--------ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQ 160 (303)
Q Consensus 93 ----~~~V~~~~~~~~--------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~ 160 (303)
+|.++|.++... ...+.......+++|+.++..+++++...-.+--+++.+++....
T Consensus 84 ~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~----------- 152 (257)
T PRK08594 84 EVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGE----------- 152 (257)
T ss_pred hCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCc-----------
Confidence 344666654321 112233344577899999888887776542111234433321110
Q ss_pred cCCcCcCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCc
Q 042242 161 VRFYDEECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLP 231 (303)
Q Consensus 161 ~~~~~e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (303)
.+. +. ... |+.+|...+ ..... +++..+.|+.+-.+........ ... ...... ..|
T Consensus 153 -~~~----~~--~~~---Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~-~~~--~~~~~~--~~p 217 (257)
T PRK08594 153 -RVV----QN--YNV---MGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGF-NSI--LKEIEE--RAP 217 (257)
T ss_pred -cCC----CC--Cch---hHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccc-cHH--HHHHhh--cCC
Confidence 000 00 122 666555443 11122 9999999988876311000000 000 000000 111
Q ss_pred eeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 232 FVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 232 ~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
+..+.+++++|.++++++...... ..|..+.+.++
T Consensus 218 -------------~~r~~~p~~va~~~~~l~s~~~~~-~tG~~~~~dgg 252 (257)
T PRK08594 218 -------------LRRTTTQEEVGDTAAFLFSDLSRG-VTGENIHVDSG 252 (257)
T ss_pred -------------ccccCCHHHHHHHHHHHcCccccc-ccceEEEECCc
Confidence 112457789999999887654321 34577766655
No 255
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.29 E-value=1.6e-10 Score=100.49 Aligned_cols=106 Identities=18% Similarity=0.169 Sum_probs=77.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCC-CeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTAN-WKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
|+++++||||++.||.+++++|+ ..| ++|++++|+..+.. . ....+.++.+|++|.++++++++.
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~-~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 80 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALA-ATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGR 80 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-HcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 67899999999999999999999 688 99999999765431 1 123567889999999988776643
Q ss_pred -cCceeEEeecccc-----cCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 93 -LEDVTHIFWVTWA-----SQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 93 -~~~V~~~~~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
+|.++|.++.... ..+.......+++|+.++..++..+...
T Consensus 81 ~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~ 127 (314)
T TIGR01289 81 PLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDD 127 (314)
T ss_pred CCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 4557777654211 1123344557899999988887776553
No 256
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.26 E-value=1.9e-09 Score=90.94 Aligned_cols=209 Identities=13% Similarity=0.022 Sum_probs=119.2
Q ss_pred CCCCEEEEEcCCC--hhHHHHHHHHhhcCCCeEEEEecCCc-----------cc-c----cc--CCCeEEEEecCCCHHH
Q 042242 26 DAKNVAVIFGVTG--LVGKELARRLISTANWKVYGIARKPE-----------IT-A----IQ--SSSYCFISCDLLNPLD 85 (303)
Q Consensus 26 ~~~~~vlVtGatG--~iG~~l~~~L~~~~g~~V~~~~r~~~-----------~~-~----~~--~~~~~~~~~D~~~~~~ 85 (303)
.++|+|+||||+| .||++++++|+ ..|++|++++|... .. . .. ..++.++++|++|.++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~-~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~ 82 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELA-EAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA 82 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHH-HCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 3568999999995 89999999999 68999888754210 00 0 01 1256788999999998
Q ss_pred HHHHHhc-------cCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhcc--CCccEEEEeecccccccc
Q 042242 86 IKRKLTL-------LEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRA--KALKHVSLQTGMKHYVSL 152 (303)
Q Consensus 86 l~~~~~~-------~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~ 152 (303)
+.++++. .|.++|.++.... ..+.....+.+++|+.+...+...+.... ..-.+++.+++...+
T Consensus 83 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~--- 159 (256)
T PRK12859 83 PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQ--- 159 (256)
T ss_pred HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccC---
Confidence 8777754 3457777654321 22333445678999999888866554331 112244444432111
Q ss_pred cCCCcccccCCcCcCCCCCCCCccchHHHHHHHHH-----Hh---cCC-cceEEecCCceeecCCCCccchhhHHHHHHH
Q 042242 153 QGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE-----KL---AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGA 223 (303)
Q Consensus 153 ~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e-----~~---~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~ 223 (303)
.+. .+... |+.+|...+ .. ... ++++.++|+.+-.+. .. ... ...
T Consensus 160 ---------~~~------~~~~~---Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~--~~----~~~--~~~ 213 (256)
T PRK12859 160 ---------GPM------VGELA---YAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGW--MT----EEI--KQG 213 (256)
T ss_pred ---------CCC------CCchH---HHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCC--CC----HHH--HHH
Confidence 000 00122 666555443 11 122 999999999886521 11 010 000
Q ss_pred HhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 224 VCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 224 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
+.. ..| +-.+...+|+|+++++++...... ..|+.+.+.++
T Consensus 214 ~~~--~~~-------------~~~~~~~~d~a~~~~~l~s~~~~~-~~G~~i~~dgg 254 (256)
T PRK12859 214 LLP--MFP-------------FGRIGEPKDAARLIKFLASEEAEW-ITGQIIHSEGG 254 (256)
T ss_pred HHh--cCC-------------CCCCcCHHHHHHHHHHHhCccccC-ccCcEEEeCCC
Confidence 100 111 112456789999998887554321 34566666554
No 257
>PRK06484 short chain dehydrogenase; Validated
Probab=99.26 E-value=4.2e-10 Score=104.77 Aligned_cols=106 Identities=14% Similarity=0.107 Sum_probs=80.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHhc-------cCc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLTL-------LED 95 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~~-------~~~ 95 (303)
++|+++||||++.||..++++|. +.|++|++++|+..... ....++.++++|++|+++++++++. +|.
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFA-RAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 46899999999999999999999 68999999999866532 1123567789999999988777754 455
Q ss_pred eeEEeecc------cccCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 96 VTHIFWVT------WASQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 96 V~~~~~~~------~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
++|.++.. ....+..+..+.+++|+.++..+++++...
T Consensus 83 li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 126 (520)
T PRK06484 83 LVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRL 126 (520)
T ss_pred EEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 77776541 122334455568999999999999888765
No 258
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.25 E-value=1.3e-09 Score=92.27 Aligned_cols=215 Identities=13% Similarity=0.077 Sum_probs=122.2
Q ss_pred CCCCEEEEEcC--CChhHHHHHHHHhhcCCCeEEEEecCC---cccc---ccCCCeEEEEecCCCHHHHHHHHhc-----
Q 042242 26 DAKNVAVIFGV--TGLVGKELARRLISTANWKVYGIARKP---EITA---IQSSSYCFISCDLLNPLDIKRKLTL----- 92 (303)
Q Consensus 26 ~~~~~vlVtGa--tG~iG~~l~~~L~~~~g~~V~~~~r~~---~~~~---~~~~~~~~~~~D~~~~~~l~~~~~~----- 92 (303)
+++|+++|||| ++.||.+++++|+ +.|++|+++.|.. +... .......++.+|++|+++++++++.
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 82 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACK-REGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHW 82 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHH-HCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHh
Confidence 34689999996 6799999999999 6899998886542 1111 1112334688999999988777654
Q ss_pred --cCceeEEeecccc---------cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCccccc
Q 042242 93 --LEDVTHIFWVTWA---------SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQV 161 (303)
Q Consensus 93 --~~~V~~~~~~~~~---------~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~ 161 (303)
.|.++|.++.... ..+..+..+.+++|+.++..+.+++...-.+-.+++.+++....
T Consensus 83 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~------------ 150 (260)
T PRK06997 83 DGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAE------------ 150 (260)
T ss_pred CCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccc------------
Confidence 4457777654211 12233444578999999998988877652111234443321110
Q ss_pred CCcCcCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCce
Q 042242 162 RFYDEECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPF 232 (303)
Q Consensus 162 ~~~~e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (303)
.+. +. ... |+.+|.... ..... +++..+.|+.+-.+........ .. ....+.. ..|+
T Consensus 151 ~~~----~~--~~~---Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~-~~--~~~~~~~--~~p~ 216 (260)
T PRK06997 151 RVV----PN--YNT---MGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDF-GK--ILDFVES--NAPL 216 (260)
T ss_pred cCC----CC--cch---HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccch-hh--HHHHHHh--cCcc
Confidence 000 00 112 666555433 11222 9999999998865311100000 00 0001111 1121
Q ss_pred eeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 233 VFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 233 ~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
-.+..++|+|.++++++..+... ..|+++.+.++.
T Consensus 217 -------------~r~~~pedva~~~~~l~s~~~~~-itG~~i~vdgg~ 251 (260)
T PRK06997 217 -------------RRNVTIEEVGNVAAFLLSDLASG-VTGEITHVDSGF 251 (260)
T ss_pred -------------cccCCHHHHHHHHHHHhCccccC-cceeEEEEcCCh
Confidence 12457789999999987654322 345777776653
No 259
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.25 E-value=9.1e-10 Score=93.21 Aligned_cols=215 Identities=12% Similarity=0.077 Sum_probs=119.6
Q ss_pred CCCCEEEEEcC--CChhHHHHHHHHhhcCCCeEEEEecCCcccc----c--cCCCeEEEEecCCCHHHHHHHHhc-----
Q 042242 26 DAKNVAVIFGV--TGLVGKELARRLISTANWKVYGIARKPEITA----I--QSSSYCFISCDLLNPLDIKRKLTL----- 92 (303)
Q Consensus 26 ~~~~~vlVtGa--tG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~--~~~~~~~~~~D~~~~~~l~~~~~~----- 92 (303)
+++|+++|||| ++.||++++++|+ +.|++|++..|...... . .......+++|+.|.++++++++.
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 82 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACR-EQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW 82 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHH-HCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence 35689999997 6799999999999 68999998876532111 1 112345789999999988777643
Q ss_pred --cCceeEEeecccc---------cCChHHHHHHHHHHHHHHHHHHHHHhhc-cCCccEEEEeecccccccccCCCcccc
Q 042242 93 --LEDVTHIFWVTWA---------SQFASDMHKCCEQNKAMMCNALNAILPR-AKALKHVSLQTGMKHYVSLQGLPEEKQ 160 (303)
Q Consensus 93 --~~~V~~~~~~~~~---------~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~~~~~~s~~~~y~~~~~~~g~~~ 160 (303)
+|.++|.++.... ..........+++|+.++..+.+.+... ..+-.+++.+++...+
T Consensus 83 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~----------- 151 (261)
T PRK08690 83 DGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAV----------- 151 (261)
T ss_pred CCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccc-----------
Confidence 4557777654321 1112233346788998888877766543 1111233333321111
Q ss_pred cCCcCcCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCc
Q 042242 161 VRFYDEECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLP 231 (303)
Q Consensus 161 ~~~~~e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (303)
.+. +. ... |+.+|...+ ..... +++..+.||.+-.+........ .. ....+.. ..|
T Consensus 152 -~~~----~~--~~~---Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~-~~--~~~~~~~--~~p 216 (261)
T PRK08690 152 -RAI----PN--YNV---MGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADF-GK--LLGHVAA--HNP 216 (261)
T ss_pred -cCC----CC--ccc---chhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCch-HH--HHHHHhh--cCC
Confidence 000 10 112 555444332 11122 9999999998876311100000 00 0000110 112
Q ss_pred eeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCC
Q 042242 232 FVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGP 281 (303)
Q Consensus 232 ~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~ 281 (303)
+..+..++|+|.++++++...... ..|+.+-+.++.
T Consensus 217 -------------~~r~~~peevA~~v~~l~s~~~~~-~tG~~i~vdgG~ 252 (261)
T PRK08690 217 -------------LRRNVTIEEVGNTAAFLLSDLSSG-ITGEITYVDGGY 252 (261)
T ss_pred -------------CCCCCCHHHHHHHHHHHhCcccCC-cceeEEEEcCCc
Confidence 112567889999999988754332 345777666654
No 260
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.25 E-value=7.6e-11 Score=98.69 Aligned_cols=106 Identities=17% Similarity=0.139 Sum_probs=82.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--ccCCCeEEEEecCCCHHHHHHHHhccCceeEEeeccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTW 104 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~ 104 (303)
++++++||||+|+||++++++|+ ..|++|++++|++.... ........+.+|++|.+++.+.+..+|.++|.++...
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~-~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~~ 91 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFR-AKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGINP 91 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHH-HCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCccCC
Confidence 56899999999999999999999 68999999999762211 1111235678999999999998888888888876532
Q ss_pred c-cCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 105 A-SQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 105 ~-~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
. ..+..+..+.+++|+.++..+++++...
T Consensus 92 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 121 (245)
T PRK12367 92 GGRQDPENINKALEINALSSWRLLELFEDI 121 (245)
T ss_pred cCCCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 2 2334555668999999999999987764
No 261
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.23 E-value=3.5e-09 Score=89.37 Aligned_cols=106 Identities=13% Similarity=0.029 Sum_probs=76.1
Q ss_pred CCCEEEEEcC--CChhHHHHHHHHhhcCCCeEEEEecCCc-cc-c----ccCCCeEEEEecCCCHHHHHHHHhc------
Q 042242 27 AKNVAVIFGV--TGLVGKELARRLISTANWKVYGIARKPE-IT-A----IQSSSYCFISCDLLNPLDIKRKLTL------ 92 (303)
Q Consensus 27 ~~~~vlVtGa--tG~iG~~l~~~L~~~~g~~V~~~~r~~~-~~-~----~~~~~~~~~~~D~~~~~~l~~~~~~------ 92 (303)
.+|+++|||| ++.||.+++++|+ +.|++|++++|+.. .. . .....+.++++|+.|.++++++++.
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la-~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g 84 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQ-EQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVD 84 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHH-HCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 4689999999 8999999999999 68999999987642 11 1 1123567899999999988776643
Q ss_pred -cCceeEEeeccc--------ccCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 93 -LEDVTHIFWVTW--------ASQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 93 -~~~V~~~~~~~~--------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
+|.++|.++... ...+.++..+.+++|+.++..+.+.+...
T Consensus 85 ~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~ 134 (256)
T PRK07889 85 GLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPL 134 (256)
T ss_pred CCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHh
Confidence 445677665431 12233444457899999998888887654
No 262
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.22 E-value=2.3e-10 Score=90.51 Aligned_cols=114 Identities=17% Similarity=0.113 Sum_probs=80.3
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCccccc----------cCCCeEEEEecCCCHHHHHHHHhcc----
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITAI----------QSSSYCFISCDLLNPLDIKRKLTLL---- 93 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~----------~~~~~~~~~~D~~~~~~l~~~~~~~---- 93 (303)
++++|+||+|+||.+++++|+ ..|+ .|+++.|++..... ...++.++.+|+.+.+++++.++..
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~-~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLA-ERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARL 79 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHH-HhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 579999999999999999998 5665 68888887543210 1235677899999998887776543
Q ss_pred ---CceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeec
Q 042242 94 ---EDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTG 145 (303)
Q Consensus 94 ---~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~ 145 (303)
|.++|.++.... .....+....++.|+.++..++++++.. +..+++.+++
T Consensus 80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~ii~~ss 136 (180)
T smart00822 80 GPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL--PLDFFVLFSS 136 (180)
T ss_pred CCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC--CcceEEEEcc
Confidence 568888764321 2223444567899999999999999754 2334444443
No 263
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.22 E-value=4.9e-10 Score=97.57 Aligned_cols=159 Identities=15% Similarity=0.117 Sum_probs=100.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--c--CCCeEEEEecCCC--HHH---HHHHHhc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--Q--SSSYCFISCDLLN--PLD---IKRKLTL 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~--~~~~~~~~~D~~~--~~~---l~~~~~~ 92 (303)
.+++++||||||.||++++++|+ +.|++|++++|++++.. . . ..++..+.+|+.+ .+. +.+.+.+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La-~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLA-RKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHH-HCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 46899999999999999999999 68999999999876532 1 1 1246677899985 233 3334444
Q ss_pred cC--ceeEEeecccc------cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccC
Q 042242 93 LE--DVTHIFWVTWA------SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVR 162 (303)
Q Consensus 93 ~~--~V~~~~~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~ 162 (303)
.| .++|.++.... +.+..+..+.+++|+.++..+.+++... ..+-.+++.+++...+..+ .
T Consensus 131 ~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~--------~- 201 (320)
T PLN02780 131 LDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP--------S- 201 (320)
T ss_pred CCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC--------C-
Confidence 44 47777664321 2233444568999999999998887653 1222345555443222100 0
Q ss_pred CcCcCCCCCCCCccchHHHHHHHHH--------HhcCC-cceEEecCCceee
Q 042242 163 FYDEECPRVSKSNNFYYVLEDLLKE--------KLAGK-VAWSVHRPGLLLG 205 (303)
Q Consensus 163 ~~~e~~~~~p~~~~~~y~~~k~~~e--------~~~~~-~~~~ilRp~~v~G 205 (303)
.|. ... |+.+|...+ ..... ++++.++||.+-.
T Consensus 202 -----~p~--~~~---Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T 243 (320)
T PLN02780 202 -----DPL--YAV---YAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVAT 243 (320)
T ss_pred -----Ccc--chH---HHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceec
Confidence 000 123 777666544 11222 9999999998876
No 264
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.21 E-value=1.9e-10 Score=102.28 Aligned_cols=108 Identities=10% Similarity=0.119 Sum_probs=84.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc----cCCCeEEEEecCCCHHHHHHHHhccCceeEEe
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI----QSSSYCFISCDLLNPLDIKRKLTLLEDVTHIF 100 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~ 100 (303)
+.++|+|+||||+|+||++++++|. +.|++|++++|++.+... ...++..+.+|+.|.+++.+.+.++|.++|.+
T Consensus 175 sl~gK~VLITGASgGIG~aLA~~La-~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnA 253 (406)
T PRK07424 175 SLKGKTVAVTGASGTLGQALLKELH-QQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINH 253 (406)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECC
Confidence 4457899999999999999999998 689999999998654321 12246678899999999999999888888876
Q ss_pred eccc-ccCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 101 WVTW-ASQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 101 ~~~~-~~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
+... ...+.++..+.+++|+.++.++++++...
T Consensus 254 Gi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~ 287 (406)
T PRK07424 254 GINVHGERTPEAINKSYEVNTFSAWRLMELFFTT 287 (406)
T ss_pred CcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5432 23344445568999999999999998764
No 265
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.17 E-value=1.2e-09 Score=91.34 Aligned_cols=121 Identities=17% Similarity=0.171 Sum_probs=82.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------ccCC-CeEEEEecCCCHHHHHHHHh----
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------IQSS-SYCFISCDLLNPLDIKRKLT---- 91 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------~~~~-~~~~~~~D~~~~~~l~~~~~---- 91 (303)
...+|.|+|||||..||.+++..|. +.|..++.+.|+..... .... ++.++++|++|.+++.+.++
T Consensus 9 ~~~~kvVvITGASsGIG~~lA~~la-~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~ 87 (282)
T KOG1205|consen 9 RLAGKVVLITGASSGIGEALAYELA-KRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR 87 (282)
T ss_pred HhCCCEEEEeCCCcHHHHHHHHHHH-hCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH
Confidence 3457899999999999999999999 78988888877654431 1122 59999999999998886653
Q ss_pred ---ccCceeEEeecccc----cCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecc
Q 042242 92 ---LLEDVTHIFWVTWA----SQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGM 146 (303)
Q Consensus 92 ---~~~~V~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~ 146 (303)
++|+++|-|+.... .....+..+.+++|+.|+..+.+++... ..+--|++.+++.
T Consensus 88 ~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSi 151 (282)
T KOG1205|consen 88 HFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSI 151 (282)
T ss_pred hcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecc
Confidence 33444444444321 1123344458999999998888887765 1122455555543
No 266
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.12 E-value=4.3e-09 Score=87.14 Aligned_cols=105 Identities=4% Similarity=-0.017 Sum_probs=73.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHh--------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLT-------- 91 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~-------- 91 (303)
++|+++||||++.||+.++++|+ +.|++|+++.|+..+.. . ...++..+.+|+.|.++++++++
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la-~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFA-RLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 46899999999999999999999 68999999999876432 1 12346678899999998876654
Q ss_pred ccCceeEEeeccc-----ccCChHHHHHHHHHHHHHHHHHHHHHhh
Q 042242 92 LLEDVTHIFWVTW-----ASQFASDMHKCCEQNKAMMCNALNAILP 132 (303)
Q Consensus 92 ~~~~V~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~ 132 (303)
.+|.++|.++... .+.+..+..+.+++|+.++..++..+..
T Consensus 83 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (227)
T PRK08862 83 APDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAE 128 (227)
T ss_pred CCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3455777764211 1122233334667788877766665543
No 267
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=99.11 E-value=1.5e-09 Score=82.66 Aligned_cols=155 Identities=18% Similarity=0.183 Sum_probs=96.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCe-EEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEeecccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWK-VYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWA 105 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~ 105 (303)
.++.++|.||||..|+.+++.++....++ |+++.|++..-......+.....|....+++...+++.|+.+++.++.-.
T Consensus 17 q~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLgTTRg 96 (238)
T KOG4039|consen 17 QNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPATDKVVAQVEVDFSKLSQLATNEQGPDVLFCALGTTRG 96 (238)
T ss_pred hccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccccceeeeEEechHHHHHHHhhhcCCceEEEeeccccc
Confidence 45789999999999999999999666777 99999996432233445666778988888888899998866666443221
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHH----
Q 042242 106 SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVL---- 181 (303)
Q Consensus 106 ~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~---- 181 (303)
... .+- .+++.-.-...+.+++++. ..+++...|+... +.++ +|.|.+
T Consensus 97 kaG-adg--fykvDhDyvl~~A~~AKe~--Gck~fvLvSS~GA----------------d~sS-------rFlY~k~KGE 148 (238)
T KOG4039|consen 97 KAG-ADG--FYKVDHDYVLQLAQAAKEK--GCKTFVLVSSAGA----------------DPSS-------RFLYMKMKGE 148 (238)
T ss_pred ccc-cCc--eEeechHHHHHHHHHHHhC--CCeEEEEEeccCC----------------Cccc-------ceeeeeccch
Confidence 111 111 3333334444566666654 3455555553211 1111 222443
Q ss_pred -HHHHHHHhcCCcceEEecCCceeecCCCCc
Q 042242 182 -EDLLKEKLAGKVAWSVHRPGLLLGSSHRSL 211 (303)
Q Consensus 182 -~k~~~e~~~~~~~~~ilRp~~v~G~~~~~~ 211 (303)
|+-+.|..- -+++|+|||.+.|..+.+.
T Consensus 149 vE~~v~eL~F--~~~~i~RPG~ll~~R~esr 177 (238)
T KOG4039|consen 149 VERDVIELDF--KHIIILRPGPLLGERTESR 177 (238)
T ss_pred hhhhhhhccc--cEEEEecCcceeccccccc
Confidence 333333321 4789999999999766543
No 268
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.08 E-value=7.2e-09 Score=89.66 Aligned_cols=107 Identities=16% Similarity=0.067 Sum_probs=74.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc----------cc-----cc--CCCeEEEEecCCCHHHHHH
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI----------TA-----IQ--SSSYCFISCDLLNPLDIKR 88 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~----------~~-----~~--~~~~~~~~~D~~~~~~l~~ 88 (303)
+.+|+++||||++.||.+++++|+ ..|++|++++|+..+ .. .. ...+.++++|+.|.+++++
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la-~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~ 84 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELG-AAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRA 84 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence 346899999999999999999999 689999999997421 10 01 1246778999999998877
Q ss_pred HHhc-------cCceeEEe-eccc--------ccCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 89 KLTL-------LEDVTHIF-WVTW--------ASQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 89 ~~~~-------~~~V~~~~-~~~~--------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
+++. +|.++|.+ +... ......+..+.+++|+.+...+++++...
T Consensus 85 ~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~ 145 (305)
T PRK08303 85 LVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPL 145 (305)
T ss_pred HHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 6654 34466665 3210 01122333457889999988888777654
No 269
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=99.08 E-value=3.4e-09 Score=89.43 Aligned_cols=104 Identities=16% Similarity=0.095 Sum_probs=73.7
Q ss_pred EEEEEcCCChhHHHHHHHHhh---cCCCeEEEEecCCcccc-----cc----CCCeEEEEecCCCHHHHHHHHhcc----
Q 042242 30 VAVIFGVTGLVGKELARRLIS---TANWKVYGIARKPEITA-----IQ----SSSYCFISCDLLNPLDIKRKLTLL---- 93 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~---~~g~~V~~~~r~~~~~~-----~~----~~~~~~~~~D~~~~~~l~~~~~~~---- 93 (303)
.++||||++.||.+++++|++ ..|++|++++|+..... .. ..++.++.+|+.|.++++++++.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 689999999999999999983 26999999999865422 11 125778899999999887776543
Q ss_pred -------CceeEEeecccc-----c--CChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 94 -------EDVTHIFWVTWA-----S--QFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 94 -------~~V~~~~~~~~~-----~--~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
+.++|.++.... . .......+.+++|+.++..+.+.+...
T Consensus 82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~ 135 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKA 135 (256)
T ss_pred ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 236666543211 0 112344468999999988888776654
No 270
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=99.07 E-value=5.5e-09 Score=91.46 Aligned_cols=114 Identities=17% Similarity=0.213 Sum_probs=70.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-c-----cCCCeEEEEecCCCHHH-HHHHHhccC--cee
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-I-----QSSSYCFISCDLLNPLD-IKRKLTLLE--DVT 97 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~-----~~~~~~~~~~D~~~~~~-l~~~~~~~~--~V~ 97 (303)
...+|+|+||||.+|+.+++.|+ +.|+.|+++.|+..+.. . ...+...+..|.....+ +......+. .++
T Consensus 78 ~~~~VlVvGatG~vG~~iv~~ll-krgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~ 156 (411)
T KOG1203|consen 78 KPTTVLVVGATGKVGRRIVKILL-KRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVVI 156 (411)
T ss_pred CCCeEEEecCCCchhHHHHHHHH-HCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhcccccee
Confidence 45699999999999999999999 78999999999987643 1 13345555565554433 333333321 122
Q ss_pred EEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEee
Q 042242 98 HIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQT 144 (303)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s 144 (303)
...+........ +-.....+...|+.+++++|+.++ +.|++..+
T Consensus 157 v~~~~ggrp~~e-d~~~p~~VD~~g~knlvdA~~~aG--vk~~vlv~ 200 (411)
T KOG1203|consen 157 VIKGAGGRPEEE-DIVTPEKVDYEGTKNLVDACKKAG--VKRVVLVG 200 (411)
T ss_pred EEecccCCCCcc-cCCCcceecHHHHHHHHHHHHHhC--CceEEEEE
Confidence 222221122111 111134678899999999998773 44554443
No 271
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.06 E-value=6.7e-09 Score=81.30 Aligned_cols=166 Identities=16% Similarity=0.110 Sum_probs=106.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---ccCCCeEEEEecCCCHHHHHHHHhc----c---Cce
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---IQSSSYCFISCDLLNPLDIKRKLTL----L---EDV 96 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~D~~~~~~l~~~~~~----~---~~V 96 (303)
.+.+||||||+..||..+++++. ..|.+|++..|+..... ..-+.+....+|+.|.+++++.+.. . +++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~-elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl 82 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFL-ELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVL 82 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHH-HhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhee
Confidence 46799999999999999999999 68889999999987643 3457888899999998866554432 2 347
Q ss_pred eEEeeccc------ccCChHHHHHHHHHHHHHHHHHHHHHhhc-cCC-ccEEEEeecccccccccCCCcccccCCcCcCC
Q 042242 97 THIFWVTW------ASQFASDMHKCCEQNKAMMCNALNAILPR-AKA-LKHVSLQTGMKHYVSLQGLPEEKQVRFYDEEC 168 (303)
Q Consensus 97 ~~~~~~~~------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~-~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~ 168 (303)
++.|+.-. ......+..+.+++|+.++..+..++..+ ..+ -..++-.||.-.+. -.+..
T Consensus 83 iNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafv-------------Pm~~~ 149 (245)
T COG3967 83 INNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFV-------------PMAST 149 (245)
T ss_pred eecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccC-------------ccccc
Confidence 77766522 11122334567899999999999988877 222 12222223211110 01111
Q ss_pred CCCCCCccchHHHHHHHHHHhcCC-cceEEecCCceeec
Q 042242 169 PRVSKSNNFYYVLEDLLKEKLAGK-VAWSVHRPGLLLGS 206 (303)
Q Consensus 169 ~~~p~~~~~~y~~~k~~~e~~~~~-~~~~ilRp~~v~G~ 206 (303)
|.+...-......+..++++.+.. +++.-+-|+.|-..
T Consensus 150 PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 150 PVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred ccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 111011111123366677777665 88888899988874
No 272
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=99.01 E-value=6.4e-08 Score=75.18 Aligned_cols=217 Identities=15% Similarity=0.141 Sum_probs=125.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----ccC-CCeEEEEecCCCHHHHHHHHhcc------
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----IQS-SSYCFISCDLLNPLDIKRKLTLL------ 93 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~~-~~~~~~~~D~~~~~~l~~~~~~~------ 93 (303)
.|++.++||||+..||+++++.|. ..|++|.+.+++..... +.. .+-..+.+|+.+..+++..|++.
T Consensus 12 ~~sk~~~vtGg~sGIGrAia~~la-~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ 90 (256)
T KOG1200|consen 12 LMSKVAAVTGGSSGIGRAIAQLLA-KKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGT 90 (256)
T ss_pred HhcceeEEecCCchHHHHHHHHHH-hcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCC
Confidence 367899999999999999999998 79999999998866432 111 23446789999988766655432
Q ss_pred -CceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhc-----cC--CccEEEEeecccccccccCCCccccc
Q 042242 94 -EDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPR-----AK--ALKHVSLQTGMKHYVSLQGLPEEKQV 161 (303)
Q Consensus 94 -~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-----~~--~~~~~~~~s~~~~y~~~~~~~g~~~~ 161 (303)
++++++|+..- ...+.+++.+.+.+|+.+...+..++.+. +. .++.++++-|-. +. ...
T Consensus 91 psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGki---GN------~GQ 161 (256)
T KOG1200|consen 91 PSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKI---GN------FGQ 161 (256)
T ss_pred CcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccc---cc------ccc
Confidence 34777766532 23345555568999999988777776554 11 344444332210 10 001
Q ss_pred CCcCcCCCCCCCCccchHHHHHHH-HHHhcCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhh
Q 042242 162 RFYDEECPRVSKSNNFYYVLEDLL-KEKLAGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREI 240 (303)
Q Consensus 162 ~~~~e~~~~~p~~~~~~y~~~k~~-~e~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 240 (303)
..|.....-. -+-+|.+ +|..+..+++..+.|+.|-.|-+..- + +.. ...+.. ..|+-
T Consensus 162 tnYAAsK~Gv-------IgftktaArEla~knIrvN~VlPGFI~tpMT~~m-p--~~v--~~ki~~--~iPmg------- 220 (256)
T KOG1200|consen 162 TNYAASKGGV-------IGFTKTAARELARKNIRVNVVLPGFIATPMTEAM-P--PKV--LDKILG--MIPMG------- 220 (256)
T ss_pred hhhhhhcCce-------eeeeHHHHHHHhhcCceEeEeccccccChhhhhc-C--HHH--HHHHHc--cCCcc-------
Confidence 1111000000 1112333 33333339999999998887433211 0 111 111221 23322
Q ss_pred hhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 241 WEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 241 ~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
.+-+++++|...++++ ++......|..+.++++
T Consensus 221 ------r~G~~EevA~~V~fLA-S~~ssYiTG~t~evtGG 253 (256)
T KOG1200|consen 221 ------RLGEAEEVANLVLFLA-SDASSYITGTTLEVTGG 253 (256)
T ss_pred ------ccCCHHHHHHHHHHHh-ccccccccceeEEEecc
Confidence 2457889998888887 44333244567877776
No 273
>PRK05599 hypothetical protein; Provisional
Probab=99.01 E-value=2.2e-08 Score=84.03 Aligned_cols=100 Identities=16% Similarity=0.124 Sum_probs=67.7
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----cc---CCCeEEEEecCCCHHHHHHHHhc-------c
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----IQ---SSSYCFISCDLLNPLDIKRKLTL-------L 93 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~---~~~~~~~~~D~~~~~~l~~~~~~-------~ 93 (303)
|+++||||++.||..++++|. + |++|++++|++.+.. .. ...+.++++|+.|.++++++++. .
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~-g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 78 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-H-GEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEI 78 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence 579999999999999999997 5 899999999865432 11 12477889999999888776543 3
Q ss_pred CceeEEeeccccc----CChHHHHHHHHHHHHHHHHHHHHH
Q 042242 94 EDVTHIFWVTWAS----QFASDMHKCCEQNKAMMCNALNAI 130 (303)
Q Consensus 94 ~~V~~~~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~ 130 (303)
|.++|.++..... .......+..++|+.+...++..+
T Consensus 79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 119 (246)
T PRK05599 79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVL 119 (246)
T ss_pred CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHH
Confidence 4466665432111 112222245677887777665554
No 274
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.99 E-value=1.1e-08 Score=85.03 Aligned_cols=127 Identities=12% Similarity=0.071 Sum_probs=89.8
Q ss_pred cCCCCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc-----c-CCCeEEEEecCCCHHHHHHHHhcc--
Q 042242 22 GREVDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI-----Q-SSSYCFISCDLLNPLDIKRKLTLL-- 93 (303)
Q Consensus 22 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~-----~-~~~~~~~~~D~~~~~~l~~~~~~~-- 93 (303)
...+..++.||||||++.+|+.++.+++ +.|..+.+.+.++..... . ...+..+.+|+++.+.+.+..+.+
T Consensus 32 ~~k~v~g~~vLITGgg~GlGr~ialefa-~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~ 110 (300)
T KOG1201|consen 32 PLKSVSGEIVLITGGGSGLGRLIALEFA-KRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKK 110 (300)
T ss_pred chhhccCCEEEEeCCCchHHHHHHHHHH-HhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHH
Confidence 3444567899999999999999999999 688888888887665421 1 125788999999999877666543
Q ss_pred -----CceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeeccccc
Q 042242 94 -----EDVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHY 149 (303)
Q Consensus 94 -----~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y 149 (303)
+.+++-|+... .+.++++-...+++|+.+.....++.... ..+--|++.+++...+
T Consensus 111 e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~ 177 (300)
T KOG1201|consen 111 EVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGL 177 (300)
T ss_pred hcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcc
Confidence 22444444432 23345566678999999998888887765 3455677777664444
No 275
>PLN00015 protochlorophyllide reductase
Probab=98.97 E-value=2e-08 Score=87.16 Aligned_cols=101 Identities=17% Similarity=0.135 Sum_probs=73.3
Q ss_pred EEEcCCChhHHHHHHHHhhcCC-CeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHhc-------cCce
Q 042242 32 VIFGVTGLVGKELARRLISTAN-WKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLTL-------LEDV 96 (303)
Q Consensus 32 lVtGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~-------~~~V 96 (303)
+||||++.||.+++++|+ ..| ++|++++|+..... . ....+.++.+|+.|.++++++++. +|.+
T Consensus 1 lITGas~GIG~aia~~l~-~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l 79 (308)
T PLN00015 1 IITGASSGLGLATAKALA-ETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVL 79 (308)
T ss_pred CEeCCCChHHHHHHHHHH-HCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEE
Confidence 699999999999999999 678 99999999765431 1 123577889999999988776653 3557
Q ss_pred eEEeecccc-----cCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 97 THIFWVTWA-----SQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 97 ~~~~~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
+|.++.... ..+.......+++|+.++..+++.+...
T Consensus 80 InnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~ 121 (308)
T PLN00015 80 VCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDD 121 (308)
T ss_pred EECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 777654211 1133444568999999988887776554
No 276
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=98.96 E-value=1.2e-08 Score=80.19 Aligned_cols=115 Identities=18% Similarity=0.205 Sum_probs=81.3
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecC--Ccccc-------ccCCCeEEEEecCCCHHHHHHHHhcc------
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARK--PEITA-------IQSSSYCFISCDLLNPLDIKRKLTLL------ 93 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~--~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~~~------ 93 (303)
|+|+||||++.||..++++|++..++.|+++.|+ .+... ....++.++++|+++.++++++++.+
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 5899999999999999999995446678888888 22111 12357889999999999888777654
Q ss_pred -CceeEEeeccccc----CChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeec
Q 042242 94 -EDVTHIFWVTWAS----QFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTG 145 (303)
Q Consensus 94 -~~V~~~~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~ 145 (303)
|.++|+++..... ...+...+.++.|+.+...+.+++... .-.+++.+++
T Consensus 81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~g~iv~~sS 135 (167)
T PF00106_consen 81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQ--GGGKIVNISS 135 (167)
T ss_dssp ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHH--TTEEEEEEEE
T ss_pred ccccccccccccccccccccchhhhhccccccceeeeeeehheec--cccceEEecc
Confidence 3477776553311 123444568999999999999998872 2344444443
No 277
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=98.90 E-value=2.7e-08 Score=83.14 Aligned_cols=204 Identities=16% Similarity=0.107 Sum_probs=119.5
Q ss_pred cCC--ChhHHHHHHHHhhcCCCeEEEEecCCcccc------ccCCCeEEEEecCCCHHHHHHHHhc--------cCceeE
Q 042242 35 GVT--GLVGKELARRLISTANWKVYGIARKPEITA------IQSSSYCFISCDLLNPLDIKRKLTL--------LEDVTH 98 (303)
Q Consensus 35 Gat--G~iG~~l~~~L~~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~D~~~~~~l~~~~~~--------~~~V~~ 98 (303)
|++ +.||+.+++.|+ +.|++|++++|+..+.. ....+..++.+|+.+.++++++++. +|.++|
T Consensus 1 g~~~s~GiG~aia~~l~-~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~ 79 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALA-EEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVN 79 (241)
T ss_dssp STSSTSHHHHHHHHHHH-HTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEE
T ss_pred CCCCCCChHHHHHHHHH-HCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEe
Confidence 566 999999999999 78999999999987621 1122355799999999987776543 345677
Q ss_pred Eeecccc--------cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCC
Q 042242 99 IFWVTWA--------SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPR 170 (303)
Q Consensus 99 ~~~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~ 170 (303)
.++.... +.+..+....++.|+.++..+++++.+...+-..++.+++.... .+
T Consensus 80 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~------------~~------- 140 (241)
T PF13561_consen 80 NAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQ------------RP------- 140 (241)
T ss_dssp EEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGT------------SB-------
T ss_pred cccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhc------------cc-------
Confidence 6554432 11234445688999999999998886651111233333321110 00
Q ss_pred CCCCccchHHHHHHHHH---------Hhc-CCcceEEecCCceeecCCCCccchhhHHHHHHH-HhhhCCCceeeCCchh
Q 042242 171 VSKSNNFYYVLEDLLKE---------KLA-GKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGA-VCKHLNLPFVFGGTRE 239 (303)
Q Consensus 171 ~p~~~~~~y~~~k~~~e---------~~~-~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~ 239 (303)
.|.+. .|+..|...+ +.. ..+++..+.||.+..+... .......... ..+ ..|
T Consensus 141 ~~~~~--~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~----~~~~~~~~~~~~~~--~~p-------- 204 (241)
T PF13561_consen 141 MPGYS--AYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTE----RIPGNEEFLEELKK--RIP-------- 204 (241)
T ss_dssp STTTH--HHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHH----HHHTHHHHHHHHHH--HST--------
T ss_pred Cccch--hhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchh----ccccccchhhhhhh--hhc--------
Confidence 00111 2665444333 333 2299999999988863211 0010000111 111 112
Q ss_pred hhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 240 IWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 240 ~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
+-.+..++|+|.++++++..... ...|+.+.+.+|
T Consensus 205 -----l~r~~~~~evA~~v~fL~s~~a~-~itG~~i~vDGG 239 (241)
T PF13561_consen 205 -----LGRLGTPEEVANAVLFLASDAAS-YITGQVIPVDGG 239 (241)
T ss_dssp -----TSSHBEHHHHHHHHHHHHSGGGT-TGTSEEEEESTT
T ss_pred -----cCCCcCHHHHHHHHHHHhCcccc-CccCCeEEECCC
Confidence 11245788999999988865522 245688877765
No 278
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=98.90 E-value=2.1e-07 Score=80.20 Aligned_cols=215 Identities=12% Similarity=0.024 Sum_probs=116.7
Q ss_pred CCCCEEEEEcC--CChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c----------cC-----CCeEEEEecC--C
Q 042242 26 DAKNVAVIFGV--TGLVGKELARRLISTANWKVYGIARKPEITA-----I----------QS-----SSYCFISCDL--L 81 (303)
Q Consensus 26 ~~~~~vlVtGa--tG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~----------~~-----~~~~~~~~D~--~ 81 (303)
+++|++||||| +..||.++++.|. ..|.+|++ .|+..... . .. .....+.+|+ .
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la-~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 84 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALA-AAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFD 84 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHH-HCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecC
Confidence 57899999999 7999999999999 68999887 54322110 0 00 1135677888 3
Q ss_pred CH------------------HHHHHHHhc-------cCceeEEeecc------cccCChHHHHHHHHHHHHHHHHHHHHH
Q 042242 82 NP------------------LDIKRKLTL-------LEDVTHIFWVT------WASQFASDMHKCCEQNKAMMCNALNAI 130 (303)
Q Consensus 82 ~~------------------~~l~~~~~~-------~~~V~~~~~~~------~~~~~~~~~~~~~~~n~~~~~~ll~~~ 130 (303)
++ ++++++++. +|.++|.++.. ....+..+..+.+++|+.++..+++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~ 164 (303)
T PLN02730 85 TPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHF 164 (303)
T ss_pred ccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 22 245444432 45677776321 122334455568999999999998887
Q ss_pred hhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHHH---------HhcCC-cceEEecC
Q 042242 131 LPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKE---------KLAGK-VAWSVHRP 200 (303)
Q Consensus 131 ~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~~~~-~~~~ilRp 200 (303)
...-..--+++.+++..... +. +.. ... |..+|...+ +.... +++..+.|
T Consensus 165 ~p~m~~~G~II~isS~a~~~------------~~----p~~-~~~---Y~asKaAl~~l~~~la~El~~~~gIrVn~V~P 224 (303)
T PLN02730 165 GPIMNPGGASISLTYIASER------------II----PGY-GGG---MSSAKAALESDTRVLAFEAGRKYKIRVNTISA 224 (303)
T ss_pred HHHHhcCCEEEEEechhhcC------------CC----CCC-chh---hHHHHHHHHHHHHHHHHHhCcCCCeEEEEEee
Confidence 76521113344443311110 00 000 012 666555443 22213 99999999
Q ss_pred CceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecC
Q 042242 201 GLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 201 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~ 280 (303)
|.+-.+-... ...... ....... ..| +..+...++++.++++++...... ..|+.+.+.++
T Consensus 225 G~v~T~~~~~-~~~~~~--~~~~~~~--~~p-------------l~r~~~peevA~~~~fLaS~~a~~-itG~~l~vdGG 285 (303)
T PLN02730 225 GPLGSRAAKA-IGFIDD--MIEYSYA--NAP-------------LQKELTADEVGNAAAFLASPLASA-ITGATIYVDNG 285 (303)
T ss_pred CCccCchhhc-ccccHH--HHHHHHh--cCC-------------CCCCcCHHHHHHHHHHHhCccccC-ccCCEEEECCC
Confidence 8886632111 000000 0000000 111 011457789999999988644321 34566766655
Q ss_pred C
Q 042242 281 P 281 (303)
Q Consensus 281 ~ 281 (303)
.
T Consensus 286 ~ 286 (303)
T PLN02730 286 L 286 (303)
T ss_pred c
Confidence 3
No 279
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=98.87 E-value=1.2e-07 Score=75.59 Aligned_cols=105 Identities=18% Similarity=0.130 Sum_probs=71.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEe-cCCcccc-------ccCCCeEEEEecCCCHHHHHHHHhccC----
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIA-RKPEITA-------IQSSSYCFISCDLLNPLDIKRKLTLLE---- 94 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~-r~~~~~~-------~~~~~~~~~~~D~~~~~~l~~~~~~~~---- 94 (303)
.+++|+||||+..||.-|+++|++..|.++++-. |+++++. ...+++++++.|+++.+++...++++.
T Consensus 2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg 81 (249)
T KOG1611|consen 2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVG 81 (249)
T ss_pred CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence 3567999999999999999999977888855555 4455522 136799999999999999888776543
Q ss_pred -----ceeEEeecc--c---ccCChHHHHHHHHHHHHHHHHHHHHHh
Q 042242 95 -----DVTHIFWVT--W---ASQFASDMHKCCEQNKAMMCNALNAIL 131 (303)
Q Consensus 95 -----~V~~~~~~~--~---~~~~~~~~~~~~~~n~~~~~~ll~~~~ 131 (303)
.+++-++.. + ...++....+.+++|..++.-+..++.
T Consensus 82 ~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~l 128 (249)
T KOG1611|consen 82 SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFL 128 (249)
T ss_pred cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHH
Confidence 133333321 1 122233445688999988665555443
No 280
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=98.86 E-value=5.2e-07 Score=76.37 Aligned_cols=222 Identities=17% Similarity=0.053 Sum_probs=124.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c-----cCCCeEEEEecCCCHHHHHHHH----
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I-----QSSSYCFISCDLLNPLDIKRKL---- 90 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~-----~~~~~~~~~~D~~~~~~l~~~~---- 90 (303)
...+|+++|||++..||++++..|. +.|.+|++.+|+.+... + ....+..+.+|+.+.+..++.+
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la-~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~ 83 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLA-KAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV 83 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence 4567999999999999999999999 78999999999877531 1 1235778999999876544433
Q ss_pred hc----cCceeEEeeccc-----ccCChHHHHHHHHHHHHH-HHHHHHHHhhcc--CCccEEEEeecccccccccCCCcc
Q 042242 91 TL----LEDVTHIFWVTW-----ASQFASDMHKCCEQNKAM-MCNALNAILPRA--KALKHVSLQTGMKHYVSLQGLPEE 158 (303)
Q Consensus 91 ~~----~~~V~~~~~~~~-----~~~~~~~~~~~~~~n~~~-~~~ll~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~g~ 158 (303)
+. .|.+++-++... .+.+.+.....+++|+.| ...+..++..+. .+--.+..+++...+...
T Consensus 84 ~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~------ 157 (270)
T KOG0725|consen 84 EKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPG------ 157 (270)
T ss_pred HHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCC------
Confidence 32 454555544433 223344555688999994 666666666551 122233333322121000
Q ss_pred cccCCcCcCCCCCCCCccchHHHHHHHHH---------Hh-cCCcceEEecCCceeecCCCCccchhhHHHHHHHHhhhC
Q 042242 159 KQVRFYDEECPRVSKSNNFYYVLEDLLKE---------KL-AGKVAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHL 228 (303)
Q Consensus 159 ~~~~~~~e~~~~~p~~~~~~y~~~k~~~e---------~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 228 (303)
. ..+ ..|+.+|.... .. .+ +++..+-|+.|..+........ ..... ..+..
T Consensus 158 ------------~-~~~-~~Y~~sK~al~~ltr~lA~El~~~g-IRvN~v~PG~i~T~~~~~~~~~-~~~~~---~~~~~ 218 (270)
T KOG0725|consen 158 ------------P-GSG-VAYGVSKAALLQLTRSLAKELAKHG-IRVNSVSPGLVKTSLRAAGLDD-GEMEE---FKEAT 218 (270)
T ss_pred ------------C-CCc-ccchhHHHHHHHHHHHHHHHHhhcC-cEEEEeecCcEeCCcccccccc-chhhH---Hhhhh
Confidence 0 110 12666554333 22 23 9999999999988531111000 00000 11100
Q ss_pred CCceeeCCchhhhhhhcccCccHHHHHHHHHHHhcCcCCcCCCCceEEeecCCC
Q 042242 229 NLPFVFGGTREIWEEYCLDGSDSRLVAEQHIWVATNDDISSTKGQAFNAINGPR 282 (303)
Q Consensus 229 ~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~~~~~~~~~~~~~g~~yni~~~~~ 282 (303)
..... ...-.+..++++|.+...++..... ...|+.+.+.++..
T Consensus 219 ~~~~~---------~p~gr~g~~~eva~~~~fla~~~as-yitG~~i~vdgG~~ 262 (270)
T KOG0725|consen 219 DSKGA---------VPLGRVGTPEEVAEAAAFLASDDAS-YITGQTIIVDGGFT 262 (270)
T ss_pred ccccc---------cccCCccCHHHHHHhHHhhcCcccc-cccCCEEEEeCCEE
Confidence 00001 0111245667888888887766543 24456666665543
No 281
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.82 E-value=6.9e-08 Score=76.08 Aligned_cols=106 Identities=16% Similarity=0.171 Sum_probs=76.9
Q ss_pred CCCEEEEEcC-CChhHHHHHHHHhhcCCCeEEEEecCCcccc-c-cCCCeEEEEecCCCHHHHHHHHhccCc-----eeE
Q 042242 27 AKNVAVIFGV-TGLVGKELARRLISTANWKVYGIARKPEITA-I-QSSSYCFISCDLLNPLDIKRKLTLLED-----VTH 98 (303)
Q Consensus 27 ~~~~vlVtGa-tG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~-~~~~~~~~~~D~~~~~~l~~~~~~~~~-----V~~ 98 (303)
..|+|||||+ +|.||.+|++.+. +.||.|++..|+-+.-. + ...++...+.|+.+++.+..+..+..+ +..
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~-~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFA-RNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHH-hCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 3578998875 5999999999998 79999999999876543 2 256789999999999988776654321 222
Q ss_pred E---eecc--c--ccCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 99 I---FWVT--W--ASQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 99 ~---~~~~--~--~~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
+ |+.+ + .+......++.+++|+.|..++.+++...
T Consensus 85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~ 126 (289)
T KOG1209|consen 85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHF 126 (289)
T ss_pred EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHH
Confidence 2 3221 1 23334455578999999988888877643
No 282
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=98.81 E-value=2.4e-07 Score=77.58 Aligned_cols=121 Identities=17% Similarity=0.185 Sum_probs=86.6
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----cc-CCCeEEEEecCCCHHHHHHHHhccC----
Q 042242 24 EVDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQ-SSSYCFISCDLLNPLDIKRKLTLLE---- 94 (303)
Q Consensus 24 ~~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~-~~~~~~~~~D~~~~~~l~~~~~~~~---- 94 (303)
.+..+|-|||||+--..|+.++.+|. +.|+.|++-+..++... .. .++...++.|++++++++++.+-+.
T Consensus 25 ~~~~~k~VlITGCDSGfG~~LA~~L~-~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~ 103 (322)
T KOG1610|consen 25 DSLSDKAVLITGCDSGFGRLLAKKLD-KKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLG 103 (322)
T ss_pred cccCCcEEEEecCCcHHHHHHHHHHH-hcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcc
Confidence 34467889999999999999999998 79999999997665532 22 6788999999999999988775321
Q ss_pred -----ceeEEeecc-cccCC----hHHHHHHHHHHHHHHHHHHHHHhhc----cCCccEEEEeec
Q 042242 95 -----DVTHIFWVT-WASQF----ASDMHKCCEQNKAMMCNALNAILPR----AKALKHVSLQTG 145 (303)
Q Consensus 95 -----~V~~~~~~~-~~~~~----~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~~~~~~s~ 145 (303)
.++|.|+.. ..... .++.+..+++|+.|+.++..++... -.+++.+++.+|
T Consensus 104 ~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G 168 (322)
T KOG1610|consen 104 EDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG 168 (322)
T ss_pred cccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc
Confidence 166666532 22221 2344468899999988887776655 345555555443
No 283
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.79 E-value=2.3e-07 Score=79.87 Aligned_cols=170 Identities=16% Similarity=0.071 Sum_probs=104.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---------ccCCCeEEEEecCCCHHHHHHHHhcc---
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---------IQSSSYCFISCDLLNPLDIKRKLTLL--- 93 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---------~~~~~~~~~~~D~~~~~~l~~~~~~~--- 93 (303)
..+++++|||||..||.++++.|. ..|.+|+..+|+..... .....+.++++|+.+..++++..+..
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La-~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~ 111 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELA-LRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKK 111 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHH-hCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhc
Confidence 346899999999999999999999 68899999999974431 12346778999999999887766543
Q ss_pred ----CceeEEeecccccC--ChHHHHHHHHHHHHHHHHHHHHHhhc--cCCccEEEEeecccccccccCCCcccccCCcC
Q 042242 94 ----EDVTHIFWVTWASQ--FASDMHKCCEQNKAMMCNALNAILPR--AKALKHVSLQTGMKHYVSLQGLPEEKQVRFYD 165 (303)
Q Consensus 94 ----~~V~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~ 165 (303)
|+.|+-|+...... ..+.-+..+.+|..|...+.+.+... .....+++..|+..+ +.... + .....
T Consensus 112 ~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~-~----~~l~~ 185 (314)
T KOG1208|consen 112 EGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKID-L----KDLSG 185 (314)
T ss_pred CCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccc-h----hhccc
Confidence 22333233322222 22223447899999988887777665 111145555555333 11000 0 00011
Q ss_pred cCCCCCCCCccc-hHHHHHHHHH-----H----hcCCcceEEecCCceeec
Q 042242 166 EECPRVSKSNNF-YYVLEDLLKE-----K----LAGKVAWSVHRPGLLLGS 206 (303)
Q Consensus 166 e~~~~~p~~~~~-~y~~~k~~~e-----~----~~~~~~~~ilRp~~v~G~ 206 (303)
+.... +... -|+.+|+... . ..+ +.+..+.||.+...
T Consensus 186 ~~~~~---~~~~~~Y~~SKla~~l~~~eL~k~l~~~-V~~~~~hPG~v~t~ 232 (314)
T KOG1208|consen 186 EKAKL---YSSDAAYALSKLANVLLANELAKRLKKG-VTTYSVHPGVVKTT 232 (314)
T ss_pred hhccC---ccchhHHHHhHHHHHHHHHHHHHHhhcC-ceEEEECCCccccc
Confidence 11110 1111 2777776553 1 123 88999999999884
No 284
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.78 E-value=2.2e-07 Score=77.69 Aligned_cols=205 Identities=16% Similarity=0.119 Sum_probs=113.7
Q ss_pred HHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhc----cCceeEEeecccccCChHHHHHHHHHH
Q 042242 44 LARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTL----LEDVTHIFWVTWASQFASDMHKCCEQN 119 (303)
Q Consensus 44 l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~----~~~V~~~~~~~~~~~~~~~~~~~~~~n 119 (303)
+++.|+ +.|++|++++|++.+.. ..+++++|+.|.++++++++. +|.++|.++... ... ....+++|
T Consensus 1 ~a~~l~-~~G~~Vv~~~r~~~~~~----~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~--~~~--~~~~~~vN 71 (241)
T PRK12428 1 TARLLR-FLGARVIGVDRREPGMT----LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG--TAP--VELVARVN 71 (241)
T ss_pred ChHHHH-hCCCEEEEEeCCcchhh----hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC--CCC--HHHhhhhc
Confidence 467788 68999999999876531 235678999999999888875 566888876532 122 23479999
Q ss_pred HHHHHHHHHHHhhccCCccEEEEeecccccccccCCCccc----ccCCcCc------CCCCCCCCccchHHHHHHHHH--
Q 042242 120 KAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEK----QVRFYDE------ECPRVSKSNNFYYVLEDLLKE-- 187 (303)
Q Consensus 120 ~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~----~~~~~~e------~~~~~p~~~~~~y~~~k~~~e-- 187 (303)
+.++..+++.+.....+-.+++.+++...|+.+.. ++.. ......+ ..+..+..+ |+.+|...+
T Consensus 72 ~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---Y~~sK~a~~~~ 147 (241)
T PRK12428 72 FLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQR-LELHKALAATASFDEGAAWLAAHPVALATG---YQLSKEALILW 147 (241)
T ss_pred hHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccc-hHHHHhhhccchHHHHHHhhhccCCCcccH---HHHHHHHHHHH
Confidence 99999999998765222245555555444432110 0000 0000000 011111233 777775443
Q ss_pred ---Hh----cCC-cceEEecCCceeecCCCCccchhhHHHHHHHHhhhCCCceeeCCchhhhhhhcccCccHHHHHHHHH
Q 042242 188 ---KL----AGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCLDGSDSRLVAEQHI 259 (303)
Q Consensus 188 ---~~----~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~a~a~~ 259 (303)
.+ ... +++.+++||.+.++-..... ..... ....+ . . ..+..+...+++|.+++
T Consensus 148 ~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~---~~~~~-~~~~~----~-~---------~~~~~~~~pe~va~~~~ 209 (241)
T PRK12428 148 TMRQAQPWFGARGIRVNCVAPGPVFTPILGDFR---SMLGQ-ERVDS----D-A---------KRMGRPATADEQAAVLV 209 (241)
T ss_pred HHHHHHHhhhccCeEEEEeecCCccCcccccch---hhhhh-Hhhhh----c-c---------cccCCCCCHHHHHHHHH
Confidence 12 222 99999999999874221110 00000 00000 0 0 11112457889999999
Q ss_pred HHhcCcCCcCCCCceEEeecC
Q 042242 260 WVATNDDISSTKGQAFNAING 280 (303)
Q Consensus 260 ~~~~~~~~~~~~g~~yni~~~ 280 (303)
+++..+.. ...|+...+.++
T Consensus 210 ~l~s~~~~-~~~G~~i~vdgg 229 (241)
T PRK12428 210 FLCSDAAR-WINGVNLPVDGG 229 (241)
T ss_pred HHcChhhc-CccCcEEEecCc
Confidence 98754322 133466655554
No 285
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=98.77 E-value=2.2e-07 Score=74.09 Aligned_cols=114 Identities=20% Similarity=0.258 Sum_probs=75.6
Q ss_pred EEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCc-ccc-------c--cCCCeEEEEecCCCHHHHHHHHhccC-----
Q 042242 30 VAVIFGVTGLVGKELARRLISTANWKVYGIARKPE-ITA-------I--QSSSYCFISCDLLNPLDIKRKLTLLE----- 94 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~-~~~-------~--~~~~~~~~~~D~~~~~~l~~~~~~~~----- 94 (303)
+++|||++|.||..++++|......+|+++.|++. ... . ....+.++++|++|++++.+++..+.
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 68999999999999999999544556999999832 211 1 12467888999999999999987652
Q ss_pred --ceeEEeeccc----ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeec
Q 042242 95 --DVTHIFWVTW----ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTG 145 (303)
Q Consensus 95 --~V~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~ 145 (303)
.|||+++... ...+..+....+..-+.++.++.+++... .+.+++..|+
T Consensus 82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~--~l~~~i~~SS 136 (181)
T PF08659_consen 82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR--PLDFFILFSS 136 (181)
T ss_dssp EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT--TTSEEEEEEE
T ss_pred cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC--CCCeEEEECC
Confidence 3999976532 23334444457788889999999988764 4455555554
No 286
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=98.75 E-value=3.2e-07 Score=77.03 Aligned_cols=118 Identities=16% Similarity=0.154 Sum_probs=80.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc-----c-ccC----CCeEEEEecCCC-HHHHHHHHhc--
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT-----A-IQS----SSYCFISCDLLN-PLDIKRKLTL-- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-----~-~~~----~~~~~~~~D~~~-~~~l~~~~~~-- 92 (303)
+++++|+||||++.||..+++.|. ..|+.|+++.|+.... . ... ..+.+..+|+++ .++++.+++.
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~ 81 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALA-REGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE 81 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-HCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence 356899999999999999999999 7999988888876531 1 112 256677899998 7776655543
Q ss_pred -----cCceeEEeecc-----cccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeec
Q 042242 93 -----LEDVTHIFWVT-----WASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTG 145 (303)
Q Consensus 93 -----~~~V~~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~ 145 (303)
+|.+++.++.. ..........+.+++|+.+...+.+.+......- +++.+++
T Consensus 82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~Iv~isS 143 (251)
T COG1028 82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ-RIVNISS 143 (251)
T ss_pred HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC-eEEEECC
Confidence 44455555542 2233345556789999999888888655542211 5555544
No 287
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.74 E-value=8.5e-07 Score=76.32 Aligned_cols=108 Identities=14% Similarity=0.083 Sum_probs=65.8
Q ss_pred CCCCCEEEEEcCC--ChhHHHHHHHHhhcCCCeEEEEecCC---------ccccc-----cCC-------CeEEEEecCC
Q 042242 25 VDAKNVAVIFGVT--GLVGKELARRLISTANWKVYGIARKP---------EITAI-----QSS-------SYCFISCDLL 81 (303)
Q Consensus 25 ~~~~~~vlVtGat--G~iG~~l~~~L~~~~g~~V~~~~r~~---------~~~~~-----~~~-------~~~~~~~D~~ 81 (303)
..++|+++||||+ ..||+++++.|. ..|++|++.+|.+ ..... ... ++..+..|+.
T Consensus 5 ~~~gk~alITGa~~~~GIG~a~A~~la-~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~ 83 (299)
T PRK06300 5 DLTGKIAFIAGIGDDQGYGWGIAKALA-EAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFD 83 (299)
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHH-HCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcC
Confidence 3467899999995 899999999999 7899998876532 00000 000 0111223333
Q ss_pred CHH------------------HHHHHHh-------ccCceeEEeecc------cccCChHHHHHHHHHHHHHHHHHHHHH
Q 042242 82 NPL------------------DIKRKLT-------LLEDVTHIFWVT------WASQFASDMHKCCEQNKAMMCNALNAI 130 (303)
Q Consensus 82 ~~~------------------~l~~~~~-------~~~~V~~~~~~~------~~~~~~~~~~~~~~~n~~~~~~ll~~~ 130 (303)
+.+ +++++++ ..|.++|.++.. ....+..+..+.+++|+.+..++++++
T Consensus 84 ~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~ 163 (299)
T PRK06300 84 TPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHF 163 (299)
T ss_pred CCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 332 2333332 345567765421 122334455568899999999999988
Q ss_pred hhc
Q 042242 131 LPR 133 (303)
Q Consensus 131 ~~~ 133 (303)
...
T Consensus 164 ~p~ 166 (299)
T PRK06300 164 GPI 166 (299)
T ss_pred HHH
Confidence 765
No 288
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.68 E-value=2.2e-07 Score=80.77 Aligned_cols=109 Identities=10% Similarity=0.041 Sum_probs=74.1
Q ss_pred CEEEEEcCCChhHHHHHHHHhhc------CCCeEEEEecCCccccccCCCeE------EEEecCCCHHHHHHHHhccCce
Q 042242 29 NVAVIFGVTGLVGKELARRLIST------ANWKVYGIARKPEITAIQSSSYC------FISCDLLNPLDIKRKLTLLEDV 96 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~------~g~~V~~~~r~~~~~~~~~~~~~------~~~~D~~~~~~l~~~~~~~~~V 96 (303)
.+|+||||+|+||++++..|+.. .+++|+++++++........... ....|+....++.+.++++|.|
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDiV 82 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDVA 82 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCCEE
Confidence 57999999999999999999831 23589999996642111110011 1122433345677889999999
Q ss_pred eEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhcc-CCccE
Q 042242 97 THIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRA-KALKH 139 (303)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~ 139 (303)
+|+|+..... ..+..+.++.|+.-...+...+.+.+ +..+.
T Consensus 83 I~tAG~~~~~--~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~ii 124 (325)
T cd01336 83 ILVGAMPRKE--GMERKDLLKANVKIFKEQGEALDKYAKKNVKV 124 (325)
T ss_pred EEeCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Confidence 9998764332 23334589999999999999998874 34433
No 289
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.65 E-value=5.6e-07 Score=95.74 Aligned_cols=107 Identities=14% Similarity=0.070 Sum_probs=80.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc----c-----------------------------------
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT----A----------------------------------- 67 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~----~----------------------------------- 67 (303)
+++++|||||++.||..++++|.+..|++|++++|++... +
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 4689999999999999999999954578999999982100 0
Q ss_pred -------------c--cCCCeEEEEecCCCHHHHHHHHhc------cCceeEEeeccc----ccCChHHHHHHHHHHHHH
Q 042242 68 -------------I--QSSSYCFISCDLLNPLDIKRKLTL------LEDVTHIFWVTW----ASQFASDMHKCCEQNKAM 122 (303)
Q Consensus 68 -------------~--~~~~~~~~~~D~~~~~~l~~~~~~------~~~V~~~~~~~~----~~~~~~~~~~~~~~n~~~ 122 (303)
. ....+.++.+|++|.++++++++. +|.|+|.++... ......+....+++|+.|
T Consensus 2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence 0 012467889999999988877764 456888876532 233455555689999999
Q ss_pred HHHHHHHHhhc
Q 042242 123 MCNALNAILPR 133 (303)
Q Consensus 123 ~~~ll~~~~~~ 133 (303)
+.++++++...
T Consensus 2156 ~~~Ll~al~~~ 2166 (2582)
T TIGR02813 2156 LLSLLAALNAE 2166 (2582)
T ss_pred HHHHHHHHHHh
Confidence 99999998764
No 290
>KOG4288 consensus Predicted oxidoreductase [General function prediction only]
Probab=98.62 E-value=3.5e-07 Score=72.95 Aligned_cols=202 Identities=14% Similarity=0.091 Sum_probs=119.5
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc--cCCCeEEEEecCCCHHHHHHHHhccCceeEEeeccccc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI--QSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVTWAS 106 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~~~~ 106 (303)
-..++.|+.||.|+++++... +.+++|-.+.|+..+..+ ....+....+|......+...+.+...++-++..
T Consensus 53 e~tlvlggnpfsgs~vlk~A~-~vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~gg---- 127 (283)
T KOG4288|consen 53 EWTLVLGGNPFSGSEVLKNAT-NVVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGG---- 127 (283)
T ss_pred HHHhhhcCCCcchHHHHHHHH-hhceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcccHHHhcC----
Confidence 468999999999999999998 789999999998654321 1235666778877666666666665544444322
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEEeecccccccccCCCcccccCCcCcCCCCCCCCccchHHHHHHHH
Q 042242 107 QFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSLQTGMKHYVSLQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLK 186 (303)
Q Consensus 107 ~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~~s~~~~y~~~~~~~g~~~~~~~~e~~~~~p~~~~~~y~~~k~~~ 186 (303)
..+...+.+.|-....+-++++.+. .+.+++++|.. .|+.+ +..|. . |-..|...
T Consensus 128 --fgn~~~m~~ing~ani~a~kaa~~~--gv~~fvyISa~-d~~~~----------------~~i~r-G---Y~~gKR~A 182 (283)
T KOG4288|consen 128 --FGNIILMDRINGTANINAVKAAAKA--GVPRFVYISAH-DFGLP----------------PLIPR-G---YIEGKREA 182 (283)
T ss_pred --ccchHHHHHhccHhhHHHHHHHHHc--CCceEEEEEhh-hcCCC----------------Cccch-h---hhccchHH
Confidence 1112225677777777777777766 34556665532 11111 11111 1 44444444
Q ss_pred H--HhcCC-cceEEecCCceeecCCCCccchhhHHHHH----HHHhhhCCCc---eeeCCchhhhhhhcccCccHHHHHH
Q 042242 187 E--KLAGK-VAWSVHRPGLLLGSSHRSLYNFLGCLCVY----GAVCKHLNLP---FVFGGTREIWEEYCLDGSDSRLVAE 256 (303)
Q Consensus 187 e--~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~----~~~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~a~ 256 (303)
| ..... ++-+++|||.+||...-..+. ..+... ....+...+| +.+-| ..+...+.++++|.
T Consensus 183 E~Ell~~~~~rgiilRPGFiyg~R~v~g~~--~pL~~vg~pl~~~~~~a~k~~~kLp~lg------~l~~ppvnve~VA~ 254 (283)
T KOG4288|consen 183 EAELLKKFRFRGIILRPGFIYGTRNVGGIK--SPLHTVGEPLEMVLKFALKPLNKLPLLG------PLLAPPVNVESVAL 254 (283)
T ss_pred HHHHHHhcCCCceeeccceeecccccCccc--ccHHhhhhhHHHHHHhhhchhhcCcccc------cccCCCcCHHHHHH
Confidence 4 23222 788999999999963322211 111111 1112211111 22233 45566889999999
Q ss_pred HHHHHhcCcCCc
Q 042242 257 QHIWVATNDDIS 268 (303)
Q Consensus 257 a~~~~~~~~~~~ 268 (303)
+.+.++.+|+-.
T Consensus 255 aal~ai~dp~f~ 266 (283)
T KOG4288|consen 255 AALKAIEDPDFK 266 (283)
T ss_pred HHHHhccCCCcC
Confidence 999999988653
No 291
>PRK08309 short chain dehydrogenase; Provisional
Probab=98.62 E-value=9.1e-08 Score=75.66 Aligned_cols=63 Identities=19% Similarity=0.185 Sum_probs=50.0
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc------cCCCeEEEEecCCCHHHHHHHHhcc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI------QSSSYCFISCDLLNPLDIKRKLTLL 93 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~D~~~~~~l~~~~~~~ 93 (303)
++++|||||||+|. +++.|. ..||+|++++|++..... ....+.++.+|+.|.+++.++++.+
T Consensus 1 m~vlVtGGtG~gg~-la~~L~-~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~ 69 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLC-EKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKST 69 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHH-HCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 47999999998876 999998 689999999998654321 1235778889999999988877654
No 292
>PTZ00325 malate dehydrogenase; Provisional
Probab=98.59 E-value=7.2e-07 Score=77.05 Aligned_cols=110 Identities=10% Similarity=-0.055 Sum_probs=76.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhh-cCCCeEEEEecCCcccc-cc--CCCeEEEEecCCCHHHHHHHHhccCceeEEe
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLIS-TANWKVYGIARKPEITA-IQ--SSSYCFISCDLLNPLDIKRKLTLLEDVTHIF 100 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~-~~g~~V~~~~r~~~~~~-~~--~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~ 100 (303)
..+++||.|+|++|.||+.++..|.. ...+++.++++...... .+ +-...+...+.+|+.++.+.++++|.|++++
T Consensus 5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVita 84 (321)
T PTZ00325 5 ALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICA 84 (321)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECC
Confidence 33457999999999999999999872 23357999998432221 11 1111233456666555678999999888887
Q ss_pred ecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 042242 101 WVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKA 136 (303)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~ 136 (303)
+...... .+..+.+..|+..+.++++++++++++
T Consensus 85 G~~~~~~--~tR~dll~~N~~i~~~i~~~i~~~~~~ 118 (321)
T PTZ00325 85 GVPRKPG--MTRDDLFNTNAPIVRDLVAAVASSAPK 118 (321)
T ss_pred CCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 7643322 223348999999999999999998543
No 293
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=98.53 E-value=1.3e-06 Score=69.75 Aligned_cols=102 Identities=20% Similarity=0.160 Sum_probs=71.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--------ccCCCeEEEEecCCCHHHHHHHHhcc-----
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--------IQSSSYCFISCDLLNPLDIKRKLTLL----- 93 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~~D~~~~~~l~~~~~~~----- 93 (303)
.+|++++||+.|.||+.++++|+ .+|..+.++.-+.+... .+...+.++++|+++..++++.++.+
T Consensus 4 tGKna~vtggagGIGl~~sk~Ll-~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg 82 (261)
T KOG4169|consen 4 TGKNALVTGGAGGIGLATSKALL-EKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG 82 (261)
T ss_pred cCceEEEecCCchhhHHHHHHHH-HcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence 47899999999999999999999 68888777665544421 23457889999999998888877654
Q ss_pred --CceeEEeecccccCChHHHHHHHHHHHHH----HHHHHHHHhhc
Q 042242 94 --EDVTHIFWVTWASQFASDMHKCCEQNKAM----MCNALNAILPR 133 (303)
Q Consensus 94 --~~V~~~~~~~~~~~~~~~~~~~~~~n~~~----~~~ll~~~~~~ 133 (303)
|++++-|+. .....++. .+.+|+-| +...+.++.+.
T Consensus 83 ~iDIlINgAGi--~~dkd~e~--Ti~vNLtgvin~T~~alpyMdk~ 124 (261)
T KOG4169|consen 83 TIDILINGAGI--LDDKDWER--TINVNLTGVINGTQLALPYMDKK 124 (261)
T ss_pred ceEEEEccccc--ccchhHHH--hhccchhhhhhhhhhhhhhhhhh
Confidence 334444443 22233333 78888754 55566666554
No 294
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.53 E-value=4.9e-07 Score=79.24 Aligned_cols=73 Identities=16% Similarity=0.103 Sum_probs=61.7
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHhccCceeEEeec
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWV 102 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~ 102 (303)
++|+|+|+ |+||+.++..|+++..++|++.+|+..+.. ...++++.+++|+.|.+.+.+++++.|.|++++..
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~ 78 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPP 78 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCc
Confidence 68999997 999999999998444489999999977654 12347999999999999999999999888888543
No 295
>PLN00106 malate dehydrogenase
Probab=98.52 E-value=1.2e-06 Score=75.84 Aligned_cols=111 Identities=9% Similarity=-0.064 Sum_probs=76.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcC-CCeEEEEecCCcccc-cc--CCCeEEEEecCCCHHHHHHHHhccCceeEEeecc
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTA-NWKVYGIARKPEITA-IQ--SSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVT 103 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~-~~--~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~~ 103 (303)
++||.|+|++|.||+.++..|.... ..++.++++.+.... .+ +-.......++.+.+++.+.++++|.|+|+++..
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~~ 97 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGVP 97 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCCC
Confidence 4699999999999999999997222 236999998773221 11 1111223335444455778999999999997765
Q ss_pred cccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEE
Q 042242 104 WASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHV 140 (303)
Q Consensus 104 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~ 140 (303)
..+. ....+.+..|...+.++.+.++++++.-+.+
T Consensus 98 ~~~g--~~R~dll~~N~~i~~~i~~~i~~~~p~aivi 132 (323)
T PLN00106 98 RKPG--MTRDDLFNINAGIVKTLCEAVAKHCPNALVN 132 (323)
T ss_pred CCCC--CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEE
Confidence 4322 2234489999999999999999986544333
No 296
>PRK06720 hypothetical protein; Provisional
Probab=98.50 E-value=6.8e-07 Score=70.26 Aligned_cols=77 Identities=21% Similarity=0.122 Sum_probs=58.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c--cCCCeEEEEecCCCHHHHHHHHh-------c
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I--QSSSYCFISCDLLNPLDIKRKLT-------L 92 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~-------~ 92 (303)
++++++||||+|.||+.++..|. ..|++|++++|+..... . ......++.+|+++.+++.+.++ .
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~-~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~ 93 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLA-KQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR 93 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999 68999999998765321 1 12346678999999988776543 3
Q ss_pred cCceeEEeeccc
Q 042242 93 LEDVTHIFWVTW 104 (303)
Q Consensus 93 ~~~V~~~~~~~~ 104 (303)
+|.++|.++...
T Consensus 94 iDilVnnAG~~~ 105 (169)
T PRK06720 94 IDMLFQNAGLYK 105 (169)
T ss_pred CCEEEECCCcCC
Confidence 555777766543
No 297
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.46 E-value=8.6e-07 Score=67.74 Aligned_cols=104 Identities=15% Similarity=0.049 Sum_probs=72.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---ccCC-CeEEEEecCCCHHHHHHHHhccC---cee
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---IQSS-SYCFISCDLLNPLDIKRKLTLLE---DVT 97 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---~~~~-~~~~~~~D~~~~~~l~~~~~~~~---~V~ 97 (303)
...++.|++||+.-.||+.++++|. +.|.+|+++.|++.... .+.+ -++.+.+|+.+.+.+.+.+-..- -.+
T Consensus 4 ~laG~~vlvTgagaGIG~~~v~~La-~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLV 82 (245)
T KOG1207|consen 4 SLAGVIVLVTGAGAGIGKEIVLSLA-KAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLV 82 (245)
T ss_pred cccceEEEeecccccccHHHHHHHH-hcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhh
Confidence 3457899999999999999999998 78999999999987643 1233 38889999999998888876543 233
Q ss_pred EEeecccccC----ChHHHHHHHHHHHHHHHHHHHH
Q 042242 98 HIFWVTWASQ----FASDMHKCCEQNKAMMCNALNA 129 (303)
Q Consensus 98 ~~~~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~ 129 (303)
+-|+.+.... ..++-...+++|+.+..++...
T Consensus 83 NNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~ 118 (245)
T KOG1207|consen 83 NNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQL 118 (245)
T ss_pred ccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHH
Confidence 3333322221 1222223577888776655554
No 298
>PRK09620 hypothetical protein; Provisional
Probab=98.46 E-value=4.7e-07 Score=74.51 Aligned_cols=77 Identities=13% Similarity=-0.021 Sum_probs=53.4
Q ss_pred CCCEEEEEcCC----------------ChhHHHHHHHHhhcCCCeEEEEecCCccccc-cCCC--eEEEEecCCCHHHHH
Q 042242 27 AKNVAVIFGVT----------------GLVGKELARRLISTANWKVYGIARKPEITAI-QSSS--YCFISCDLLNPLDIK 87 (303)
Q Consensus 27 ~~~~vlVtGat----------------G~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~-~~~~--~~~~~~D~~~~~~l~ 87 (303)
.+|+||||+|. ||+|++|+++|+ ..|++|+++++.....+. ...+ +..+.+|....+.+.
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~-~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~ 80 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELI-SKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMK 80 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHH-HCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHH
Confidence 46899999886 999999999999 699999999874331111 1112 334455334446777
Q ss_pred HHHh--ccCceeEEeeccc
Q 042242 88 RKLT--LLEDVTHIFWVTW 104 (303)
Q Consensus 88 ~~~~--~~~~V~~~~~~~~ 104 (303)
++++ .+|.|+|+|+.+.
T Consensus 81 ~~~~~~~~D~VIH~AAvsD 99 (229)
T PRK09620 81 SIITHEKVDAVIMAAAGSD 99 (229)
T ss_pred HHhcccCCCEEEECccccc
Confidence 8885 4677999977643
No 299
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=98.38 E-value=2e-06 Score=71.06 Aligned_cols=68 Identities=16% Similarity=0.205 Sum_probs=48.6
Q ss_pred cCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCC--HHHHHHHHhccCceeEEeecc
Q 042242 35 GVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLN--PLDIKRKLTLLEDVTHIFWVT 103 (303)
Q Consensus 35 GatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~--~~~l~~~~~~~~~V~~~~~~~ 103 (303)
.+||++|++|+++|+ ..|++|++++|+.........+++++.++..+ .+.+.+.++.+|.|+|+|+.+
T Consensus 23 ~SSG~iG~aLA~~L~-~~G~~V~li~r~~~~~~~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvs 92 (229)
T PRK06732 23 HSTGQLGKIIAETFL-AAGHEVTLVTTKTAVKPEPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVS 92 (229)
T ss_pred ccchHHHHHHHHHHH-hCCCEEEEEECcccccCCCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccC
Confidence 568999999999999 68999999998643222123467776654433 245666677788899998764
No 300
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.35 E-value=1.6e-05 Score=66.72 Aligned_cols=116 Identities=16% Similarity=0.084 Sum_probs=85.4
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c----cCCCeEEEEecCCCHHHHHHHHhcc------
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I----QSSSYCFISCDLLNPLDIKRKLTLL------ 93 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~----~~~~~~~~~~D~~~~~~l~~~~~~~------ 93 (303)
++|+|||++-.||..++..+. ..|.+|+++.|+..+.. + ...++.+..+|+.|-++...++++.
T Consensus 34 ~hi~itggS~glgl~la~e~~-~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~ 112 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECK-REGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGP 112 (331)
T ss_pred ceEEEecCcchhhHHHHHHHH-HccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCC
Confidence 699999999999999999998 68999999999877642 1 1123668899999999888888776
Q ss_pred -CceeEEeeccccc----CChHHHHHHHHHHHHHHHHHHHHHhhccCCcc---EEEEeec
Q 042242 94 -EDVTHIFWVTWAS----QFASDMHKCCEQNKAMMCNALNAILPRAKALK---HVSLQTG 145 (303)
Q Consensus 94 -~~V~~~~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~---~~~~~s~ 145 (303)
|.++++|+.+... .+...-....++|..++.+++.++....+... +++++++
T Consensus 113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS 172 (331)
T KOG1210|consen 113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSS 172 (331)
T ss_pred cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehh
Confidence 2377776655433 33444456789999999999988776522222 5555543
No 301
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=98.34 E-value=6e-06 Score=67.03 Aligned_cols=124 Identities=15% Similarity=0.131 Sum_probs=78.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCC----CeEEEEecCCcccc---------cc--CCCeEEEEecCCCHHHHHHHH
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTAN----WKVYGIARKPEITA---------IQ--SSSYCFISCDLLNPLDIKRKL 90 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g----~~V~~~~r~~~~~~---------~~--~~~~~~~~~D~~~~~~l~~~~ 90 (303)
+|.|.++|||++..||..|+.+|+...+ ..+.+.+|+.++.. .. .-+++++++|+++.+++.++.
T Consensus 1 ~~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~ 80 (341)
T KOG1478|consen 1 MMRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRAS 80 (341)
T ss_pred CCceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHH
Confidence 4678899999999999999999993322 23666778776642 11 226788999999998877666
Q ss_pred hccC------ceeEE-eecc-ccc------------------------------CChHHHHHHHHHHHHHHHHHHHHHhh
Q 042242 91 TLLE------DVTHI-FWVT-WAS------------------------------QFASDMHKCCEQNKAMMCNALNAILP 132 (303)
Q Consensus 91 ~~~~------~V~~~-~~~~-~~~------------------------------~~~~~~~~~~~~n~~~~~~ll~~~~~ 132 (303)
+++. +-+.+ |+.- ... .+..+..+.+++|+.|...+++.+..
T Consensus 81 ~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~p 160 (341)
T KOG1478|consen 81 KDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEP 160 (341)
T ss_pred HHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhh
Confidence 5432 12222 1110 000 01223336899999999988888776
Q ss_pred c-----cCCccEEEEeeccccc
Q 042242 133 R-----AKALKHVSLQTGMKHY 149 (303)
Q Consensus 133 ~-----~~~~~~~~~~s~~~~y 149 (303)
. .+.++.+|+..+.+-|
T Consensus 161 ll~~~~~~~lvwtSS~~a~kk~ 182 (341)
T KOG1478|consen 161 LLCHSDNPQLVWTSSRMARKKN 182 (341)
T ss_pred HhhcCCCCeEEEEeeccccccc
Confidence 5 2344455544444443
No 302
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=98.25 E-value=3.7e-06 Score=75.34 Aligned_cols=71 Identities=21% Similarity=0.255 Sum_probs=56.3
Q ss_pred EEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCcccc--c---cCCCeEEEEecCCCHHHHHHHHhccCceeEEeec
Q 042242 31 AVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITA--I---QSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWV 102 (303)
Q Consensus 31 vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~--~---~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~ 102 (303)
|+|+|+ |++|+.+++.|++...+ +|++.+|+..+.. . ...++..+++|+.|.+++.+.++++|.|++++..
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp 77 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGP 77 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCcc
Confidence 799999 99999999999955556 7999999987643 1 3568999999999999999999999989998654
No 303
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=98.25 E-value=5.1e-06 Score=69.72 Aligned_cols=106 Identities=21% Similarity=0.216 Sum_probs=74.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc------ccCC--CeEEEEecCCCHHH----HHHHHhccC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA------IQSS--SYCFISCDLLNPLD----IKRKLTLLE 94 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~------~~~~--~~~~~~~D~~~~~~----l~~~~~~~~ 94 (303)
+++=++|||||..||+..+++|. ++|++|.+++|+.++.. .+.. .+.++.+|.++.+. +++.+.+.|
T Consensus 48 ~g~WAVVTGaTDGIGKayA~eLA-krG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~ 126 (312)
T KOG1014|consen 48 LGSWAVVTGATDGIGKAYARELA-KRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLD 126 (312)
T ss_pred cCCEEEEECCCCcchHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCc
Confidence 34679999999999999999999 69999999999988753 1122 46678899988664 677777777
Q ss_pred c--eeEEeeccccc-CC-----hHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 95 D--VTHIFWVTWAS-QF-----ASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 95 ~--V~~~~~~~~~~-~~-----~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
+ +++.++..+.. .+ .....+.+.+|..++..+.+.....
T Consensus 127 VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~ 173 (312)
T KOG1014|consen 127 VGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPG 173 (312)
T ss_pred eEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhh
Confidence 4 66665554421 11 1122346678888877666665543
No 304
>PRK05086 malate dehydrogenase; Provisional
Probab=98.23 E-value=1.4e-05 Score=69.22 Aligned_cols=105 Identities=15% Similarity=0.088 Sum_probs=69.8
Q ss_pred CEEEEEcCCChhHHHHHHHHhh--cCCCeEEEEecCCccc----cccC-CCeEEEEecCCCHHHHHHHHhccCceeEEee
Q 042242 29 NVAVIFGVTGLVGKELARRLIS--TANWKVYGIARKPEIT----AIQS-SSYCFISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~--~~g~~V~~~~r~~~~~----~~~~-~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
+||+|+||||.||++++..|.. ..++++++++|++... ...+ +....+.+ .+.+++.+.++++|.|+.+++
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIitaG 78 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDPTPALEGADVVLISAG 78 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEE--eCCCCHHHHcCCCCEEEEcCC
Confidence 5899999999999999988852 2356788888875421 1111 11122333 222345567788887777766
Q ss_pred cccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCc
Q 042242 102 VTWASQFASDMHKCCEQNKAMMCNALNAILPRAKAL 137 (303)
Q Consensus 102 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~ 137 (303)
..... .....+.+..|...+.++++.+.+++++-
T Consensus 79 ~~~~~--~~~R~dll~~N~~i~~~ii~~i~~~~~~~ 112 (312)
T PRK05086 79 VARKP--GMDRSDLFNVNAGIVKNLVEKVAKTCPKA 112 (312)
T ss_pred CCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 54332 22334489999999999999999885443
No 305
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.21 E-value=1.7e-05 Score=68.89 Aligned_cols=104 Identities=12% Similarity=0.058 Sum_probs=73.3
Q ss_pred EEEEEcCCChhHHHHHHHHhhcCC-------CeEEEEecCCccccccCCCeEEEEecCCCH-----------HHHHHHHh
Q 042242 30 VAVIFGVTGLVGKELARRLISTAN-------WKVYGIARKPEITAIQSSSYCFISCDLLNP-----------LDIKRKLT 91 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~-----------~~l~~~~~ 91 (303)
||.|+||+|.||+.++..|. ..+ +++.++++++.. +..+-...|+.|. ....+.++
T Consensus 2 KV~IiGAaG~VG~~~a~~L~-~~~~~~~~~~~~l~L~Di~~~~-----~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~ 75 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIA-SGELFGDDQPVILHLLDIPPAM-----KALEGVVMELQDCAFPLLKGVVITTDPEEAFK 75 (323)
T ss_pred EEEEECCCcHHHHHHHHHHH-hCCccCCCCceEEEEEecCCcc-----CccceeeeehhhhcccccCCcEEecChHHHhC
Confidence 79999999999999999988 333 369999987621 1122223344443 24567899
Q ss_pred ccCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhcc-CCccEEE
Q 042242 92 LLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRA-KALKHVS 141 (303)
Q Consensus 92 ~~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~~~ 141 (303)
++|.|+|+|+.+.. ...+..+.+..|..-...+...+.+.+ +..+.++
T Consensus 76 ~aDiVVitAG~~~~--~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiiv 124 (323)
T cd00704 76 DVDVAILVGAFPRK--PGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLV 124 (323)
T ss_pred CCCEEEEeCCCCCC--cCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEE
Confidence 99989999876433 233444589999999999999999884 6554443
No 306
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=98.19 E-value=1.5e-05 Score=66.68 Aligned_cols=95 Identities=12% Similarity=0.068 Sum_probs=66.6
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccC--ceeEEeecccc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLE--DVTHIFWVTWA 105 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~--~V~~~~~~~~~ 105 (303)
++|||+||||. |+.|++.|. ..||+|++..+++.... ....+...+..+..|.+++.+.++..+ .|++..+.
T Consensus 1 m~ILvlGGT~e-gr~la~~L~-~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHP--- 75 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLI-AQGIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATHP--- 75 (256)
T ss_pred CeEEEEechHH-HHHHHHHHH-hCCCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCH---
Confidence 47999999999 999999998 68999999999886543 222334455567778888989998754 46666432
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEE
Q 042242 106 SQFASDMHKCCEQNKAMMCNALNAILPRAKALKHV 140 (303)
Q Consensus 106 ~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~ 140 (303)
+.. ..+.++.++|++.+....++
T Consensus 76 ----------fA~--~is~~a~~a~~~~~ipylR~ 98 (256)
T TIGR00715 76 ----------FAA--QITTNATAVCKELGIPYVRF 98 (256)
T ss_pred ----------HHH--HHHHHHHHHHHHhCCcEEEE
Confidence 111 34556788888875444443
No 307
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.16 E-value=6.7e-06 Score=66.32 Aligned_cols=73 Identities=18% Similarity=0.084 Sum_probs=57.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-----c-cCCCeEEEEecCCCHHHHHHHHhccCceeEE
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-----I-QSSSYCFISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~-~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
..+++++|+||+|.+|+.+++.|. ..|++|+++.|+..+.. . ...+..+..+|..+.+.+.+.++++|.|++.
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~-~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~a 104 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLA-REGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAA 104 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEEC
Confidence 356899999999999999999998 57889999999865432 1 0124556678899999999999998866655
No 308
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=98.10 E-value=3.3e-05 Score=67.15 Aligned_cols=103 Identities=14% Similarity=0.073 Sum_probs=71.6
Q ss_pred EEEEEcCCChhHHHHHHHHhhcCC-------CeEEEEecCCccccccCCCeEEEEecCCCHH-----------HHHHHHh
Q 042242 30 VAVIFGVTGLVGKELARRLISTAN-------WKVYGIARKPEITAIQSSSYCFISCDLLNPL-----------DIKRKLT 91 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~-----------~l~~~~~ 91 (303)
+|.|+||+|.||+.++..|. ..+ ++++++++.+... ..+-...|+.|.. ...+.++
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~-~~~~~~~~~e~el~LiD~~~~~~-----~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~ 74 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIA-RGRMLGKDQPIILHLLDIPPAMK-----VLEGVVMELMDCAFPLLDGVVPTHDPAVAFT 74 (324)
T ss_pred CEEEECCCcHHHHHHHHHHH-hccccCCCCccEEEEEecCCccc-----ccceeEeehhcccchhcCceeccCChHHHhC
Confidence 58999999999999999998 322 3699999865431 1222334444433 3457888
Q ss_pred ccCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhcc-CCccEE
Q 042242 92 LLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRA-KALKHV 140 (303)
Q Consensus 92 ~~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~~~ 140 (303)
++|.|+++++..... ..+..+.+..|+.-...+...+.+++ +..+.+
T Consensus 75 ~aDiVVitAG~~~~~--~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iii 122 (324)
T TIGR01758 75 DVDVAILVGAFPRKE--GMERRDLLSKNVKIFKEQGRALDKLAKKDCKVL 122 (324)
T ss_pred CCCEEEEcCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEE
Confidence 899888887764332 22234589999999999999999884 544433
No 309
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.96 E-value=1.2e-05 Score=69.70 Aligned_cols=72 Identities=18% Similarity=0.194 Sum_probs=50.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCC-CeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEeec
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTAN-WKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWV 102 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~ 102 (303)
..+++|+||||+|+||+.++++|+...+ .+++++.|+..+...... ++..+++. .+.+.+.++|.|+|+++.
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~--el~~~~i~---~l~~~l~~aDiVv~~ts~ 225 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQA--ELGGGKIL---SLEEALPEADIVVWVASM 225 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHH--HhccccHH---hHHHHHccCCEEEECCcC
Confidence 4568999999999999999999973334 579999987654331111 11123433 466888899988888665
No 310
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=97.82 E-value=7.6e-05 Score=66.61 Aligned_cols=74 Identities=14% Similarity=0.043 Sum_probs=55.6
Q ss_pred CCCCCEEEEEcC----------------CChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHH
Q 042242 25 VDAKNVAVIFGV----------------TGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKR 88 (303)
Q Consensus 25 ~~~~~~vlVtGa----------------tG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~ 88 (303)
.+.+++|+|||| +|.+|.+++++|. ..|++|++++++... .. ..+ +..+|+.+.+++.+
T Consensus 185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~-~~Ga~V~~v~~~~~~-~~-~~~--~~~~dv~~~~~~~~ 259 (399)
T PRK05579 185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAA-RRGADVTLVSGPVNL-PT-PAG--VKRIDVESAQEMLD 259 (399)
T ss_pred ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHH-HCCCEEEEeCCCccc-cC-CCC--cEEEccCCHHHHHH
Confidence 356799999999 9999999999999 789999999987532 11 122 34579999888776
Q ss_pred HHh----ccCceeEEeecc
Q 042242 89 KLT----LLEDVTHIFWVT 103 (303)
Q Consensus 89 ~~~----~~~~V~~~~~~~ 103 (303)
.+. .+|.++|.|+.+
T Consensus 260 ~v~~~~~~~DilI~~Aav~ 278 (399)
T PRK05579 260 AVLAALPQADIFIMAAAVA 278 (399)
T ss_pred HHHHhcCCCCEEEEccccc
Confidence 664 356677776653
No 311
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=97.78 E-value=0.0002 Score=54.47 Aligned_cols=104 Identities=15% Similarity=-0.000 Sum_probs=68.0
Q ss_pred CEEEEEcCCChhHHHHHHHHhhc-CCCeEEEEecCCcccc-----c----cCCCeEEEEecCCCHHHHHHHHhccCceeE
Q 042242 29 NVAVIFGVTGLVGKELARRLIST-ANWKVYGIARKPEITA-----I----QSSSYCFISCDLLNPLDIKRKLTLLEDVTH 98 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~-----~----~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~ 98 (303)
+||.|+|++|.+|++++..|... -..++.++++++.... + ........... .+ .+.++++|.|+.
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~----~~~~~~aDivvi 75 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS-GD----YEALKDADIVVI 75 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE-SS----GGGGTTESEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc-cc----ccccccccEEEE
Confidence 48999999999999999999832 2346999999865432 0 01112211111 22 246778886666
Q ss_pred EeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccE
Q 042242 99 IFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKH 139 (303)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~ 139 (303)
+++... ....+..+.++.|..-...+.+.+.+.++.-+.
T Consensus 76 tag~~~--~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~v 114 (141)
T PF00056_consen 76 TAGVPR--KPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIV 114 (141)
T ss_dssp TTSTSS--STTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEE
T ss_pred eccccc--cccccHHHHHHHhHhHHHHHHHHHHHhCCccEE
Confidence 655432 222334458999999999999999988755443
No 312
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=97.67 E-value=0.00027 Score=61.22 Aligned_cols=103 Identities=17% Similarity=0.046 Sum_probs=65.6
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCC--eEEEEecCC--ccccccC---------CCeEEEEecCCCHHHHHHHHhccCc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANW--KVYGIARKP--EITAIQS---------SSYCFISCDLLNPLDIKRKLTLLED 95 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r~~--~~~~~~~---------~~~~~~~~D~~~~~~l~~~~~~~~~ 95 (303)
++|.|+|+||++|..++..|+ ..|+ +|++++|.+ ....... .+... ..... .+. +.++++|.
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~-~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~-~i~~~--~d~-~~l~~aDi 75 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLA-KEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA-EIKIS--SDL-SDVAGSDI 75 (309)
T ss_pred CEEEEECCCChHHHHHHHHHH-hCCCCCEEEEEECcccccccccccchhhhchhccCCCc-EEEEC--CCH-HHhCCCCE
Confidence 489999999999999999998 5565 499999954 2221000 01110 11111 112 35888887
Q ss_pred eeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCcc
Q 042242 96 VTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALK 138 (303)
Q Consensus 96 V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~ 138 (303)
|+.+++.+.. ...+..+.+..|..-...+.+.+.+.++..+
T Consensus 76 Viitag~p~~--~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~ 116 (309)
T cd05294 76 VIITAGVPRK--EGMSRLDLAKKNAKIVKKYAKQIAEFAPDTK 116 (309)
T ss_pred EEEecCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeE
Confidence 6666554322 2222334789999999999999888765443
No 313
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.67 E-value=0.00067 Score=59.00 Aligned_cols=106 Identities=9% Similarity=-0.002 Sum_probs=68.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCC-------eEEEEecCCcc--cc---ccCCCeE-EEE--ecCCCHHHHHHHHhc
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANW-------KVYGIARKPEI--TA---IQSSSYC-FIS--CDLLNPLDIKRKLTL 92 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~-------~V~~~~r~~~~--~~---~~~~~~~-~~~--~D~~~~~~l~~~~~~ 92 (303)
.+||.|+|++|.||..++..|. ..+. ++.+++..+.. .. ....+.. ... ..+. ....+.+++
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~-~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~~~~~~d 78 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIA-SGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT--DDPNVAFKD 78 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHH-hccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe--cCcHHHhCC
Confidence 4699999999999999999998 4554 79999985433 11 0000000 000 0011 112467888
Q ss_pred cCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccC-Ccc
Q 042242 93 LEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAK-ALK 138 (303)
Q Consensus 93 ~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~ 138 (303)
+|.|+.+++.+.. ...+..+.+..|..-...+...+.++++ ..+
T Consensus 79 aDivvitaG~~~k--~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~i 123 (322)
T cd01338 79 ADWALLVGAKPRG--PGMERADLLKANGKIFTAQGKALNDVASRDVK 123 (322)
T ss_pred CCEEEEeCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeE
Confidence 8877777665322 2334445899999999999999998873 444
No 314
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=97.53 E-value=0.00029 Score=60.41 Aligned_cols=72 Identities=13% Similarity=0.080 Sum_probs=54.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCe-EEEEecCC---cccc-----c--cCCCeEEEEecCCCHHHHHHHHhccC
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWK-VYGIARKP---EITA-----I--QSSSYCFISCDLLNPLDIKRKLTLLE 94 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~-V~~~~r~~---~~~~-----~--~~~~~~~~~~D~~~~~~l~~~~~~~~ 94 (303)
.++++++|+|| |.+|++++..|. ..|++ |+++.|+. .+.. + ...++.+..+|+.+.+++.+.++.+|
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La-~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~D 201 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCA-LDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSD 201 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHH-HCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCC
Confidence 34689999997 899999999998 67886 99999986 2221 1 11234556789888888888888888
Q ss_pred ceeEE
Q 042242 95 DVTHI 99 (303)
Q Consensus 95 ~V~~~ 99 (303)
.|+++
T Consensus 202 ilINa 206 (289)
T PRK12548 202 ILVNA 206 (289)
T ss_pred EEEEe
Confidence 77776
No 315
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=97.50 E-value=0.00015 Score=61.90 Aligned_cols=72 Identities=18% Similarity=0.176 Sum_probs=57.0
Q ss_pred EEEEEcCCChhHHHHHHHHhh---cCCCeEEEEecCCcccc------------ccCCCeEEEEecCCCHHHHHHHHhccC
Q 042242 30 VAVIFGVTGLVGKELARRLIS---TANWKVYGIARKPEITA------------IQSSSYCFISCDLLNPLDIKRKLTLLE 94 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~---~~g~~V~~~~r~~~~~~------------~~~~~~~~~~~D~~~~~~l~~~~~~~~ 94 (303)
-++|.|||||-|.++++.+.+ ..+.++-+-.|++.+.. .....+ ++.+|.+|++++.+..+.+.
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak~~~ 85 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAKQAR 85 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccce-EEEecCCCHHHHHHHHhhhE
Confidence 589999999999999999983 16777777788876542 112234 88899999999999999999
Q ss_pred ceeEEeec
Q 042242 95 DVTHIFWV 102 (303)
Q Consensus 95 ~V~~~~~~ 102 (303)
+|+|++++
T Consensus 86 vivN~vGP 93 (423)
T KOG2733|consen 86 VIVNCVGP 93 (423)
T ss_pred EEEecccc
Confidence 88888553
No 316
>PRK05442 malate dehydrogenase; Provisional
Probab=97.48 E-value=0.0018 Score=56.30 Aligned_cols=99 Identities=14% Similarity=0.055 Sum_probs=65.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCC-------eEEEEecCCccccccCCCeEEEEecCCCH-----------HHHHHH
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANW-------KVYGIARKPEITAIQSSSYCFISCDLLNP-----------LDIKRK 89 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~D~~~~-----------~~l~~~ 89 (303)
++||.|+|++|.+|+.++..|. ..+. ++.++++.+..... .-...|+.|. ....+.
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~-~~~~~~~~~~~el~LiDi~~~~~~~-----~g~a~Dl~~~~~~~~~~~~i~~~~y~~ 77 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIA-SGDMLGKDQPVILQLLEIPPALKAL-----EGVVMELDDCAFPLLAGVVITDDPNVA 77 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHH-hhhhcCCCCccEEEEEecCCccccc-----ceeehhhhhhhhhhcCCcEEecChHHH
Confidence 4699999999999999999887 3343 78999986532100 0000111111 122467
Q ss_pred HhccCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhcc
Q 042242 90 LTLLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRA 134 (303)
Q Consensus 90 ~~~~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~ 134 (303)
++++|.|+.+++.+ .....+..+.+..|..-...+...+.++.
T Consensus 78 ~~daDiVVitaG~~--~k~g~tR~dll~~Na~i~~~i~~~i~~~~ 120 (326)
T PRK05442 78 FKDADVALLVGARP--RGPGMERKDLLEANGAIFTAQGKALNEVA 120 (326)
T ss_pred hCCCCEEEEeCCCC--CCCCCcHHHHHHHHHHHHHHHHHHHHHhC
Confidence 88888666666543 22334445589999999999999999864
No 317
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=97.48 E-value=0.00014 Score=64.62 Aligned_cols=39 Identities=18% Similarity=0.396 Sum_probs=33.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI 65 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 65 (303)
+.++|.|.||||++|..|++.|+....++|+.+.++...
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~sa 75 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKA 75 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhc
Confidence 557999999999999999999985568899999886443
No 318
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=97.44 E-value=0.0014 Score=57.07 Aligned_cols=105 Identities=10% Similarity=0.091 Sum_probs=67.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCC-------eEEEEecCCcc--cc---ccCCCeE-EEEecCCCHHHHHHHHhccC
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANW-------KVYGIARKPEI--TA---IQSSSYC-FISCDLLNPLDIKRKLTLLE 94 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~-------~V~~~~r~~~~--~~---~~~~~~~-~~~~D~~~~~~l~~~~~~~~ 94 (303)
.-||.|+||+|.+|+.++..|+ ..+. ++.+++..+.. .. ....+.. ....+..-...-.+.++++|
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~-~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daD 81 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIA-SGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATTDPEEAFKDVD 81 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHH-hCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEecChHHHhCCCC
Confidence 3589999999999999999998 4553 79999986522 21 0000000 00001000012346788888
Q ss_pred ceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccC
Q 042242 95 DVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAK 135 (303)
Q Consensus 95 ~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~ 135 (303)
.|+..|+.+ .+...+..+.+..|..-...+...+.+.++
T Consensus 82 vVVitAG~~--~k~g~tR~dll~~Na~i~~~i~~~i~~~~~ 120 (323)
T TIGR01759 82 AALLVGAFP--RKPGMERADLLSKNGKIFKEQGKALNKVAK 120 (323)
T ss_pred EEEEeCCCC--CCCCCcHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 777776653 233344455899999999999999998865
No 319
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=97.42 E-value=0.0004 Score=57.26 Aligned_cols=67 Identities=21% Similarity=0.211 Sum_probs=54.8
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc-c--CCCeEEEEecCCCHHHHHHH-HhccCcee
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI-Q--SSSYCFISCDLLNPLDIKRK-LTLLEDVT 97 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~-~--~~~~~~~~~D~~~~~~l~~~-~~~~~~V~ 97 (303)
|+++|.| .|-+|+.+++.|. +.|++|+++++++..... . ....+.+.+|-++++.|+++ +..+|.++
T Consensus 1 m~iiIiG-~G~vG~~va~~L~-~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vv 71 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELS-EEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVV 71 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHH-hCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEE
Confidence 5789999 6999999999998 789999999999877442 2 36788999999999988887 66666433
No 320
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.41 E-value=0.0011 Score=57.27 Aligned_cols=109 Identities=11% Similarity=0.026 Sum_probs=70.3
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCC--CeEEEEecCCcccc---ccC--CCeEEEEecCCCHHHHHHHHhccCceeEEee
Q 042242 29 NVAVIFGVTGLVGKELARRLISTAN--WKVYGIARKPEITA---IQS--SSYCFISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~---~~~--~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
+||.|+|++|.+|+.++..|. ..+ .++.+++.+..... +.+ ....+.... ..+++.+.++++|.|+..++
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~-~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~~--~~~~~y~~~~daDivvitaG 77 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLK-LNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYL--GPEELKKALKGADVVVIPAG 77 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHH-hCCCCcEEEEEecCccceeehHhHhCCCcceEEEec--CCCchHHhcCCCCEEEEeCC
Confidence 489999999999999999997 455 46999988721111 111 111111110 11234568888887666666
Q ss_pred cccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEE
Q 042242 102 VTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSL 142 (303)
Q Consensus 102 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~ 142 (303)
.+. ....+..+.++.|..-...+.+.+.++++..+.+..
T Consensus 78 ~~~--k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivv 116 (310)
T cd01337 78 VPR--KPGMTRDDLFNINAGIVRDLATAVAKACPKALILII 116 (310)
T ss_pred CCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEc
Confidence 532 223344458999999999999999988765544443
No 321
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.41 E-value=0.00016 Score=55.39 Aligned_cols=104 Identities=17% Similarity=0.145 Sum_probs=76.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc----ccCCCeEEEEecCCCHHHHHHHHhcc-------Cc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA----IQSSSYCFISCDLLNPLDIKRKLTLL-------ED 95 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~D~~~~~~l~~~~~~~-------~~ 95 (303)
++-..+|||+...+|+..+++|. ..|.+|.+++-..++.. ....++.+...|+++..+++.+|..+ |.
T Consensus 8 kglvalvtggasglg~ataerla-kqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~ 86 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLA-KQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA 86 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHH-hcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence 34578999999999999999999 78999999998766542 23456788899999999988887654 34
Q ss_pred eeEEeecccccCC----------hHHHHHHHHHHHHHHHHHHHHHh
Q 042242 96 VTHIFWVTWASQF----------ASDMHKCCEQNKAMMCNALNAIL 131 (303)
Q Consensus 96 V~~~~~~~~~~~~----------~~~~~~~~~~n~~~~~~ll~~~~ 131 (303)
.++|++.+...+. -++-...+++|+.|+.|+++...
T Consensus 87 ~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~a 132 (260)
T KOG1199|consen 87 LVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGA 132 (260)
T ss_pred eeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehh
Confidence 6777665543221 22223456789999988877543
No 322
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=97.34 E-value=0.0042 Score=53.95 Aligned_cols=101 Identities=14% Similarity=0.058 Sum_probs=68.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCC--eEEEEecCCcccc-----cc-----CCCeEEEEecCCCHHHHHHHHhccCc
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANW--KVYGIARKPEITA-----IQ-----SSSYCFISCDLLNPLDIKRKLTLLED 95 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~-----~~-----~~~~~~~~~D~~~~~~l~~~~~~~~~ 95 (303)
++||.|+|+ |.+|+.++..|+ ..+. ++.+++++..... +. ..++.+. . .+ .+.++++|.
T Consensus 6 ~~ki~iiGa-G~vG~~~a~~l~-~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~----~~~~~~adi 76 (315)
T PRK00066 6 HNKVVLVGD-GAVGSSYAYALV-NQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GD----YSDCKDADL 76 (315)
T ss_pred CCEEEEECC-CHHHHHHHHHHH-hcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CC----HHHhCCCCE
Confidence 469999997 999999999998 4565 7999999776532 00 0122222 1 12 245788887
Q ss_pred eeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccE
Q 042242 96 VTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKH 139 (303)
Q Consensus 96 V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~ 139 (303)
|+..++.+.. ...+..+.+..|..-...+++.+.+.++....
T Consensus 77 vIitag~~~k--~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~v 118 (315)
T PRK00066 77 VVITAGAPQK--PGETRLDLVEKNLKIFKSIVGEVMASGFDGIF 118 (315)
T ss_pred EEEecCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 7777665332 22333458999999999999999987654433
No 323
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=97.34 E-value=0.0014 Score=56.68 Aligned_cols=108 Identities=9% Similarity=0.039 Sum_probs=70.2
Q ss_pred EEEEEcCCChhHHHHHHHHhhcCCC--eEEEEecCCcccc-c--cC--CCeEEEEecCCCHHHHHHHHhccCceeEEeec
Q 042242 30 VAVIFGVTGLVGKELARRLISTANW--KVYGIARKPEITA-I--QS--SSYCFISCDLLNPLDIKRKLTLLEDVTHIFWV 102 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~-~--~~--~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~ 102 (303)
||.|+|++|.||+.++..|. ..+. ++.++++++.... . .+ ....+.... +.+++.+.++++|.|+..++.
T Consensus 1 KV~IiGaaG~VG~~~a~~l~-~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~--~~~~~~~~~~daDivvitaG~ 77 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLK-LQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFS--GEEGLENALKGADVVVIPAGV 77 (312)
T ss_pred CEEEECCCCHHHHHHHHHHH-hCCCCcEEEEecCCCCcEEEchhhcCCcCceEEEec--CCCchHHHcCCCCEEEEeCCC
Confidence 58999999999999999998 4454 6999998763221 1 11 011111101 112245688999977777665
Q ss_pred ccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEE
Q 042242 103 TWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSL 142 (303)
Q Consensus 103 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~ 142 (303)
.. ....+..+.+..|..-...+.+.+.+.++.-+.++.
T Consensus 78 ~~--~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivv 115 (312)
T TIGR01772 78 PR--KPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVI 115 (312)
T ss_pred CC--CCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEe
Confidence 32 223344458999999999999999988765554443
No 324
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=97.32 E-value=0.00094 Score=66.16 Aligned_cols=74 Identities=14% Similarity=0.077 Sum_probs=57.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCe-------------EEEEecCCcccc---ccCCCeEEEEecCCCHHHHHHHH
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWK-------------VYGIARKPEITA---IQSSSYCFISCDLLNPLDIKRKL 90 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~-------------V~~~~r~~~~~~---~~~~~~~~~~~D~~~~~~l~~~~ 90 (303)
.+++|+|+|| |+||+.+++.|.+..+++ |++.++...... ...++++.++.|+.|.+++.+.+
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v 646 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYV 646 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhh
Confidence 3579999995 999999999998555555 777777665433 12346788999999999999999
Q ss_pred hccCceeEEee
Q 042242 91 TLLEDVTHIFW 101 (303)
Q Consensus 91 ~~~~~V~~~~~ 101 (303)
+++|.|+.+..
T Consensus 647 ~~~DaVIsalP 657 (1042)
T PLN02819 647 SQVDVVISLLP 657 (1042)
T ss_pred cCCCEEEECCC
Confidence 99887777643
No 325
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=97.27 E-value=0.0012 Score=52.48 Aligned_cols=75 Identities=15% Similarity=0.054 Sum_probs=44.8
Q ss_pred CCCEEEEEcC----------------CChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCC--HHHHHH
Q 042242 27 AKNVAVIFGV----------------TGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLN--PLDIKR 88 (303)
Q Consensus 27 ~~~~vlVtGa----------------tG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~--~~~l~~ 88 (303)
.+|+||||+| ||-.|..|++.++ ..|++|+.+.....- . ..+++.++.+.-.+ .+.+.+
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~-~~Ga~V~li~g~~~~-~-~p~~~~~i~v~sa~em~~~~~~ 78 (185)
T PF04127_consen 2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAA-RRGAEVTLIHGPSSL-P-PPPGVKVIRVESAEEMLEAVKE 78 (185)
T ss_dssp TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHH-HTT-EEEEEE-TTS------TTEEEEE-SSHHHHHHHHHH
T ss_pred CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHH-HCCCEEEEEecCccc-c-ccccceEEEecchhhhhhhhcc
Confidence 3567777765 7999999999999 799999999988421 1 13466666544322 134455
Q ss_pred HHhccCceeEEeeccc
Q 042242 89 KLTLLEDVTHIFWVTW 104 (303)
Q Consensus 89 ~~~~~~~V~~~~~~~~ 104 (303)
.++.+|.++++|+.+.
T Consensus 79 ~~~~~Di~I~aAAVsD 94 (185)
T PF04127_consen 79 LLPSADIIIMAAAVSD 94 (185)
T ss_dssp HGGGGSEEEE-SB--S
T ss_pred ccCcceeEEEecchhh
Confidence 5666777888866543
No 326
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=97.25 E-value=0.0019 Score=56.94 Aligned_cols=75 Identities=12% Similarity=0.069 Sum_probs=52.4
Q ss_pred CCCEEEEEcCCChhHHH--HHHHHhhcCCCeEEEEecCCc--cc-------------c--ccC--CCeEEEEecCCCHHH
Q 042242 27 AKNVAVIFGVTGLVGKE--LARRLISTANWKVYGIARKPE--IT-------------A--IQS--SSYCFISCDLLNPLD 85 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~--l~~~L~~~~g~~V~~~~r~~~--~~-------------~--~~~--~~~~~~~~D~~~~~~ 85 (303)
.+|++||||+++.+|.+ +++.| ..|.+|+++++... .. . ... ..+..+.+|+.+.++
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al--~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF--GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH--HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 46899999999999999 88888 37889888885321 10 0 111 235678999999988
Q ss_pred HHHHHhc-------cCceeEEeecc
Q 042242 86 IKRKLTL-------LEDVTHIFWVT 103 (303)
Q Consensus 86 l~~~~~~-------~~~V~~~~~~~ 103 (303)
+.++++. +|.++|.++.+
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccC
Confidence 7766643 44467775443
No 327
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.25 E-value=0.00062 Score=62.43 Aligned_cols=69 Identities=19% Similarity=0.107 Sum_probs=54.7
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc--cCCCeEEEEecCCCHHHHHHH-HhccCceeEE
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI--QSSSYCFISCDLLNPLDIKRK-LTLLEDVTHI 99 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~D~~~~~~l~~~-~~~~~~V~~~ 99 (303)
|+|+|+|+ |.+|+.+++.|. ..|++|+++++++..... ...++.++.+|..+...+.++ +++++.|+.+
T Consensus 1 m~viIiG~-G~ig~~~a~~L~-~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~ 72 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLS-GENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAV 72 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHH-hCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEe
Confidence 47999996 999999999998 689999999998765432 125688999999998888877 6777644443
No 328
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=97.22 E-value=0.0036 Score=54.24 Aligned_cols=99 Identities=16% Similarity=0.022 Sum_probs=67.7
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCC--CeEEEEecCCcccccc-----------CCCeEEEEecCCCHHHHHHHHhccCc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTAN--WKVYGIARKPEITAIQ-----------SSSYCFISCDLLNPLDIKRKLTLLED 95 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~~-----------~~~~~~~~~D~~~~~~l~~~~~~~~~ 95 (303)
++|.|+| +|.+|+.++..|+ ..| ++|.+++|++...... .....+. . .+. +.++++|.
T Consensus 1 ~kI~IIG-aG~vG~~~a~~l~-~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~----~~l~~aDI 71 (306)
T cd05291 1 RKVVIIG-AGHVGSSFAYSLV-NQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDY----SDCKDADI 71 (306)
T ss_pred CEEEEEC-CCHHHHHHHHHHH-hcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCH----HHhCCCCE
Confidence 4799999 5999999999998 566 5899999987654211 1111221 1 222 34678887
Q ss_pred eeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCcc
Q 042242 96 VTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALK 138 (303)
Q Consensus 96 V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~ 138 (303)
|+.+++.+.. ...+..+.+..|..-...+.+.+++.++.-+
T Consensus 72 VIitag~~~~--~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~ 112 (306)
T cd05291 72 VVITAGAPQK--PGETRLDLLEKNAKIMKSIVPKIKASGFDGI 112 (306)
T ss_pred EEEccCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 7777654322 2333445899999999999999998866544
No 329
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=97.20 E-value=0.0014 Score=58.34 Aligned_cols=103 Identities=10% Similarity=-0.039 Sum_probs=65.6
Q ss_pred CCCCEEEEEcC----------------CChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHH-HH
Q 042242 26 DAKNVAVIFGV----------------TGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDI-KR 88 (303)
Q Consensus 26 ~~~~~vlVtGa----------------tG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l-~~ 88 (303)
+.+++|+|||| ||.+|..+++.|. ..|++|+.+.++..... ... +..+|+.+.+++ +.
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~-~~Ga~V~~~~g~~~~~~--~~~--~~~~~v~~~~~~~~~ 257 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAY-KRGADVTLITGPVSLLT--PPG--VKSIKVSTAEEMLEA 257 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHH-HCCCEEEEeCCCCccCC--CCC--cEEEEeccHHHHHHH
Confidence 56899999998 4789999999999 78999999987754321 122 345788888777 54
Q ss_pred HH----hccCceeEEeecccccCCh--H----HHHHHHHHHHHHHHHHHHHHhhc
Q 042242 89 KL----TLLEDVTHIFWVTWASQFA--S----DMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 89 ~~----~~~~~V~~~~~~~~~~~~~--~----~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
++ ..+|.+++.|+.+...... . ...+.+..|+.-+..+++.+++.
T Consensus 258 ~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~ 312 (390)
T TIGR00521 258 ALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKI 312 (390)
T ss_pred HHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhh
Confidence 44 2355577776654321110 0 00012345556666677666654
No 330
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.11 E-value=0.001 Score=49.14 Aligned_cols=35 Identities=29% Similarity=0.524 Sum_probs=28.6
Q ss_pred EEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCc
Q 042242 30 VAVIFGVTGLVGKELARRLISTANWKVYGIARKPE 64 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~ 64 (303)
||.|+||||++|+.|++.|.+...+++..+..+..
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~ 35 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSR 35 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTT
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeecc
Confidence 69999999999999999999777888555554443
No 331
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=97.07 E-value=0.0013 Score=54.34 Aligned_cols=63 Identities=17% Similarity=0.158 Sum_probs=42.4
Q ss_pred cCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHh-------ccCceeEEeecc
Q 042242 35 GVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLT-------LLEDVTHIFWVT 103 (303)
Q Consensus 35 GatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~-------~~~~V~~~~~~~ 103 (303)
.++|.||++++++|+ ..|++|++++|.... .. .+ ...+|+.+.+++.+.++ .+|.++|.|+..
T Consensus 22 ~SSGgIG~AIA~~la-~~Ga~Vvlv~~~~~l-~~-~~---~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv~ 91 (227)
T TIGR02114 22 HSTGHLGKIITETFL-SAGHEVTLVTTKRAL-KP-EP---HPNLSIREIETTKDLLITLKELVQEHDILIHSMAVS 91 (227)
T ss_pred CcccHHHHHHHHHHH-HCCCEEEEEcChhhc-cc-cc---CCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEec
Confidence 348999999999999 689999998864221 10 01 23478888766655432 356688887643
No 332
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=97.06 E-value=0.0011 Score=58.32 Aligned_cols=36 Identities=22% Similarity=0.376 Sum_probs=30.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCC
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKP 63 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 63 (303)
+++|.|+||||++|+.+++.|....+++++++.++.
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~ 37 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRS 37 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECcc
Confidence 479999999999999999999855688987777643
No 333
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=97.04 E-value=0.0092 Score=53.92 Aligned_cols=105 Identities=11% Similarity=0.050 Sum_probs=70.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcC-------CC--eEEEEecCCcccc-----cc------CCCeEEEEecCCCHHHHH
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTA-------NW--KVYGIARKPEITA-----IQ------SSSYCFISCDLLNPLDIK 87 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~-------g~--~V~~~~r~~~~~~-----~~------~~~~~~~~~D~~~~~~l~ 87 (303)
.-+|.|+|++|.||.+++..|+ .. +. ++..+++++.... +. ..++.+.. .+ .
T Consensus 100 ~~KV~IIGAaG~VG~~~A~~L~-~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~---~~----y 171 (444)
T PLN00112 100 LINVAVSGAAGMISNHLLFKLA-SGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGI---DP----Y 171 (444)
T ss_pred CeEEEEECCCcHHHHHHHHHHH-hcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEec---CC----H
Confidence 4599999999999999999998 45 44 6888898876642 00 01121111 12 3
Q ss_pred HHHhccCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhh-ccCCccEEEE
Q 042242 88 RKLTLLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILP-RAKALKHVSL 142 (303)
Q Consensus 88 ~~~~~~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~-~~~~~~~~~~ 142 (303)
+.++++|.|+..++.. .....+..+.++.|..-+..+...+.+ +.+..+.++.
T Consensus 172 e~~kdaDiVVitAG~p--rkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVV 225 (444)
T PLN00112 172 EVFQDAEWALLIGAKP--RGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVV 225 (444)
T ss_pred HHhCcCCEEEECCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEc
Confidence 5788888666665543 223334455899999999999999998 4655544433
No 334
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=97.02 E-value=0.00098 Score=48.72 Aligned_cols=62 Identities=27% Similarity=0.414 Sum_probs=47.6
Q ss_pred EEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHH-HhccC
Q 042242 31 AVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRK-LTLLE 94 (303)
Q Consensus 31 vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~-~~~~~ 94 (303)
|+|+| .|-+|..+++.|. +.+++|+++++++.... ....++.++.+|.++++.++++ ++.++
T Consensus 1 vvI~G-~g~~~~~i~~~L~-~~~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~ 64 (116)
T PF02254_consen 1 VVIIG-YGRIGREIAEQLK-EGGIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGIEKAD 64 (116)
T ss_dssp EEEES--SHHHHHHHHHHH-HTTSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGCES
T ss_pred eEEEc-CCHHHHHHHHHHH-hCCCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhcCccccC
Confidence 68889 5899999999999 57779999999986643 3345689999999999988764 33444
No 335
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.01 E-value=0.00012 Score=55.29 Aligned_cols=72 Identities=15% Similarity=0.112 Sum_probs=49.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCe-EEEEecCCccccc---cCCCeEEEEecCCCHHHHHHHHhccCceeEEe
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWK-VYGIARKPEITAI---QSSSYCFISCDLLNPLDIKRKLTLLEDVTHIF 100 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~ 100 (303)
...+++|+|.|+ |..|+.++..|. ..|.+ |+++.|+..+... ...+..+-..++.+ +.+.+..+|.|+++.
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~-~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~---~~~~~~~~DivI~aT 83 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALA-ALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED---LEEALQEADIVINAT 83 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHH-HTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG---HCHHHHTESEEEE-S
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHH-HcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH---HHHHHhhCCeEEEec
Confidence 346789999995 999999999999 56877 9999998766431 11122222334433 447788888777774
Q ss_pred e
Q 042242 101 W 101 (303)
Q Consensus 101 ~ 101 (303)
.
T Consensus 84 ~ 84 (135)
T PF01488_consen 84 P 84 (135)
T ss_dssp S
T ss_pred C
Confidence 3
No 336
>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.95 E-value=0.0034 Score=50.64 Aligned_cols=103 Identities=14% Similarity=0.092 Sum_probs=60.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCe--EEEEecCCccccccCCCeEEEE--------ecCCCHHHHHHHHhc---
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWK--VYGIARKPEITAIQSSSYCFIS--------CDLLNPLDIKRKLTL--- 92 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~--V~~~~r~~~~~~~~~~~~~~~~--------~D~~~~~~l~~~~~~--- 92 (303)
.|.+.+||||++-.||..++..+. ..+-+ +.+..|.... ..++.+.. +|+.....+.+..+.
T Consensus 4 ~~r~villTGaSrgiG~~~v~~i~-aed~e~~r~g~~r~~a~----~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~ 78 (253)
T KOG1204|consen 4 NMRKVILLTGASRGIGTGSVATIL-AEDDEALRYGVARLLAE----LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRK 78 (253)
T ss_pred ccceEEEEecCCCCccHHHHHHHH-hcchHHHHHhhhccccc----ccceEEEecCCcceechHHHHHHHHHHHHhhhhh
Confidence 366889999999999999999888 45545 4444444322 23333333 444444433333321
Q ss_pred ----cCceeEEeecccc-------cCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 93 ----LEDVTHIFWVTWA-------SQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 93 ----~~~V~~~~~~~~~-------~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
.+.|||-|+.... ..+...+..+++.|+-+...+...+...
T Consensus 79 k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~ 130 (253)
T KOG1204|consen 79 KGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPK 130 (253)
T ss_pred cCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHH
Confidence 1237776654322 1223344558999999888777766654
No 337
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=96.93 E-value=0.0026 Score=55.75 Aligned_cols=35 Identities=29% Similarity=0.391 Sum_probs=28.7
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCC---eEEEEecCCc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANW---KVYGIARKPE 64 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~---~V~~~~r~~~ 64 (303)
++|+|.||||++|+.|++.|. +.+| ++..+.++..
T Consensus 2 ~~V~IvGAtG~vG~~l~~lL~-~~~hp~~~l~~l~s~~~ 39 (334)
T PRK14874 2 YNVAVVGATGAVGREMLNILE-ERNFPVDKLRLLASARS 39 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHH-hCCCCcceEEEEEcccc
Confidence 589999999999999999998 5554 5688877644
No 338
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=96.84 E-value=0.006 Score=51.43 Aligned_cols=35 Identities=17% Similarity=0.317 Sum_probs=28.2
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEe-cCC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIA-RKP 63 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~-r~~ 63 (303)
.+|.|+|++|.+|+.+++.+.+..++++.++. +++
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~ 37 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPG 37 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC
Confidence 58999999999999999988755678966644 444
No 339
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=96.84 E-value=0.0074 Score=51.77 Aligned_cols=104 Identities=19% Similarity=0.101 Sum_probs=69.0
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCC--CeEEEEecCCcccc---cc--------CCCeEEEEecCCCHHHHHHHHhccCc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTAN--WKVYGIARKPEITA---IQ--------SSSYCFISCDLLNPLDIKRKLTLLED 95 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~---~~--------~~~~~~~~~D~~~~~~l~~~~~~~~~ 95 (303)
+||.|+|| |+||+.++..|+ ..+ -++.+++....... .+ .... .+.+| .+ .+.++++|.
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~-~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~-~i~~~-~~----y~~~~~aDi 72 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLL-LQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDV-KITGD-GD----YEDLKGADI 72 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHh-cccccceEEEEEcccccccchhcchhhcchhccCce-EEecC-CC----hhhhcCCCE
Confidence 48999998 999999999997 333 37999999844332 10 0111 12222 11 357788886
Q ss_pred eeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEE
Q 042242 96 VTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSL 142 (303)
Q Consensus 96 V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~ 142 (303)
|+..++. +.+...+..+.++.|..-...+.+.+.+.++..+.++.
T Consensus 73 VvitAG~--prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVv 117 (313)
T COG0039 73 VVITAGV--PRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVV 117 (313)
T ss_pred EEEeCCC--CCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEe
Confidence 6666543 33444445558999999999999999988765555444
No 340
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=96.81 E-value=0.0062 Score=51.58 Aligned_cols=109 Identities=12% Similarity=-0.049 Sum_probs=69.0
Q ss_pred EEEEcCCChhHHHHHHHHhhcCC----CeEEEEecCCccccc---cCCCe-EE-EEecCCCHHHHHHHHhccCceeEEee
Q 042242 31 AVIFGVTGLVGKELARRLISTAN----WKVYGIARKPEITAI---QSSSY-CF-ISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 31 vlVtGatG~iG~~l~~~L~~~~g----~~V~~~~r~~~~~~~---~~~~~-~~-~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
|.|+||+|.+|..++..|+ ..+ .+|.++++++.+... +..+. .. ....+.-..++.+.++++|.|+..+.
T Consensus 1 I~IIGagG~vG~~ia~~l~-~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~ 79 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLA-DGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAG 79 (263)
T ss_pred CEEECCCChHHHHHHHHHH-hCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCC
Confidence 5799998999999999998 456 689999988755320 00000 00 01111112234578889986666654
Q ss_pred cccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEE
Q 042242 102 VTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSL 142 (303)
Q Consensus 102 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~ 142 (303)
..... .....+....|......+.+.+.+.++.-..+..
T Consensus 80 ~~~~~--g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~ 118 (263)
T cd00650 80 VGRKP--GMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVV 118 (263)
T ss_pred CCCCc--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 43222 2223347889999999999999988766554443
No 341
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.80 E-value=0.024 Score=49.02 Aligned_cols=103 Identities=11% Similarity=0.066 Sum_probs=67.7
Q ss_pred EEEEEcCCChhHHHHHHHHhhcCCC--eEEEEecCCcccc-----c------cC-CCeEEEEecCCCHHHHHHHHhccCc
Q 042242 30 VAVIFGVTGLVGKELARRLISTANW--KVYGIARKPEITA-----I------QS-SSYCFISCDLLNPLDIKRKLTLLED 95 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~-----~------~~-~~~~~~~~D~~~~~~l~~~~~~~~~ 95 (303)
||.|+|+ |.||+.++..|+ ..+. ++.+++..+.... + .. ..+.+..+| .+.++++|.
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~-~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~aDi 71 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYAL-ALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCADADI 71 (307)
T ss_pred CEEEECC-CHHHHHHHHHHH-hcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCCCCE
Confidence 5889997 999999999998 3443 5999998765432 1 11 123333322 357888886
Q ss_pred eeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEE
Q 042242 96 VTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVS 141 (303)
Q Consensus 96 V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~ 141 (303)
|+..++....+....+..+.+..|..-...+...+.+.++.-+.++
T Consensus 72 vvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~iv 117 (307)
T cd05290 72 IVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIIL 117 (307)
T ss_pred EEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 6666554322211111345899999999999999998876554433
No 342
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=96.79 E-value=0.019 Score=47.87 Aligned_cols=96 Identities=14% Similarity=-0.033 Sum_probs=65.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccC--ceeEEeeccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLE--DVTHIFWVTW 104 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~--~V~~~~~~~~ 104 (303)
|+++|||+|||+= |+.|++.|. +.|+.|++..-..... .....+.++.+-+.+.+.+.+.++..+ .|+...++
T Consensus 1 ~~~~IlvlgGT~e-gr~la~~L~-~~g~~v~~Svat~~g~-~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATHP-- 75 (248)
T PRK08057 1 MMPRILLLGGTSE-ARALARALA-AAGVDIVLSLAGRTGG-PADLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATHP-- 75 (248)
T ss_pred CCceEEEEechHH-HHHHHHHHH-hCCCeEEEEEccCCCC-cccCCceEEECCCCCHHHHHHHHHHCCCCEEEECCCc--
Confidence 4578999998765 999999998 6789977766555333 334577888889889999999998655 35555221
Q ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEE
Q 042242 105 ASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHV 140 (303)
Q Consensus 105 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~ 140 (303)
... ..+.++.++|++.+....++
T Consensus 76 ---fA~----------~is~~a~~ac~~~~ipyiR~ 98 (248)
T PRK08057 76 ---YAA----------QISANAAAACRALGIPYLRL 98 (248)
T ss_pred ---cHH----------HHHHHHHHHHHHhCCcEEEE
Confidence 111 22456778888775444443
No 343
>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]
Probab=96.78 E-value=0.0022 Score=55.60 Aligned_cols=72 Identities=17% Similarity=0.259 Sum_probs=59.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--ccCCCeEEEEecCCCHH-HHHHHHhccCceeEE
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--IQSSSYCFISCDLLNPL-DIKRKLTLLEDVTHI 99 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~D~~~~~-~l~~~~~~~~~V~~~ 99 (303)
++++||++| +||+...++..|.++...+|++-+|.-.+.. .....++-+..|+.+.+ .++..++..|.++-+
T Consensus 1 ~~~~vlllg-sg~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~~~~~~av~ldv~~~~~~L~~~v~~~D~viSL 75 (445)
T KOG0172|consen 1 TKKGVLLLG-SGFVSRPVADFLSRKKDVNVTVASRTLKDAEALVKGINIKAVSLDVADEELALRKEVKPLDLVISL 75 (445)
T ss_pred CCcceEEec-CccccchHHHHHhhcCCceEEEehhhHHHHHHHhcCCCccceEEEccchHHHHHhhhcccceeeee
Confidence 357899999 7999999999998667788999998765543 23345888999999988 899999999876666
No 344
>PTZ00117 malate dehydrogenase; Provisional
Probab=96.76 E-value=0.011 Score=51.46 Aligned_cols=105 Identities=10% Similarity=0.032 Sum_probs=67.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCC-CeEEEEecCCcccc---c--cC----CCeE-EEEecCCCHHHHHHHHhccCc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTAN-WKVYGIARKPEITA---I--QS----SSYC-FISCDLLNPLDIKRKLTLLED 95 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~---~--~~----~~~~-~~~~D~~~~~~l~~~~~~~~~ 95 (303)
..+||.|+|| |.+|+.++..|. ..+ .+|.++++++.... . .. .+.. .+.+ ..+.+ .++++|.
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~-~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~----~~d~~-~l~~ADi 76 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLIL-QKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG----TNNYE-DIKDSDV 76 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHH-HCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe----CCCHH-HhCCCCE
Confidence 4579999996 999999999887 456 67999998775431 0 00 0110 1111 11234 7788886
Q ss_pred eeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEE
Q 042242 96 VTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHV 140 (303)
Q Consensus 96 V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~ 140 (303)
|+..++..... ..+..+.+..|..-...+.+.+.+.++.-..+
T Consensus 77 VVitag~~~~~--g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vi 119 (319)
T PTZ00117 77 VVITAGVQRKE--EMTREDLLTINGKIMKSVAESVKKYCPNAFVI 119 (319)
T ss_pred EEECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEE
Confidence 66665543222 22334478899999999999998887655333
No 345
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=96.72 E-value=0.24 Score=40.33 Aligned_cols=107 Identities=12% Similarity=0.091 Sum_probs=66.7
Q ss_pred CCCCEEEEEcCC--ChhHHHHHHHHhhcCCCeEEEEecCCcccc------ccCCCeEEEEecCCCHHHHHHHHhcc----
Q 042242 26 DAKNVAVIFGVT--GLVGKELARRLISTANWKVYGIARKPEITA------IQSSSYCFISCDLLNPLDIKRKLTLL---- 93 (303)
Q Consensus 26 ~~~~~vlVtGat--G~iG~~l~~~L~~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~D~~~~~~l~~~~~~~---- 93 (303)
+.+|++||+|-. --|++.|++.|. +.|.++......+.-.. .+...-.+++||+.+.+++...|..+
T Consensus 4 L~GK~~lI~Gvan~rSIAwGIAk~l~-~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~ 82 (259)
T COG0623 4 LEGKRILIMGVANNRSIAWGIAKALA-EQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKW 82 (259)
T ss_pred cCCceEEEEEecccccHHHHHHHHHH-HcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhh
Confidence 357999999975 569999999998 78989777766542111 11123357899999999888877643
Q ss_pred ---CceeEEeeccc--------ccCChHHHHHHHHHHHHHHHHHHHHHhhc
Q 042242 94 ---EDVTHIFWVTW--------ASQFASDMHKCCEQNKAMMCNALNAILPR 133 (303)
Q Consensus 94 ---~~V~~~~~~~~--------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~ 133 (303)
|.++|+.+-+. .+.+.+.-....++..-++..+.++++..
T Consensus 83 g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~l 133 (259)
T COG0623 83 GKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPL 133 (259)
T ss_pred CcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHh
Confidence 44888843222 11112222123344445556666666655
No 346
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=96.71 E-value=0.0027 Score=56.03 Aligned_cols=38 Identities=26% Similarity=0.361 Sum_probs=31.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCC
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKP 63 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 63 (303)
+|+.+|.|+||||++|+.+++.|......+++++.++.
T Consensus 1 ~~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~ 38 (349)
T PRK08664 1 MMKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASE 38 (349)
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence 35689999999999999999999855566888885544
No 347
>PRK06223 malate dehydrogenase; Reviewed
Probab=96.71 E-value=0.0093 Score=51.73 Aligned_cols=104 Identities=15% Similarity=0.060 Sum_probs=64.1
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCcccc---cc--CC-CeEEEEecCCCHHHHHHHHhccCceeEEee
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITA---IQ--SS-SYCFISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~---~~--~~-~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
+||.|+|+ |.+|+.++..|. ..|. +|+++++++.... .. .. ........+....+. +.++++|.|+.+++
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la-~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~~ 79 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLA-LKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITAG 79 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHH-hCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECCC
Confidence 69999997 999999999998 4554 8999999765432 00 00 000000011101112 35788886666654
Q ss_pred cccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCc
Q 042242 102 VTWASQFASDMHKCCEQNKAMMCNALNAILPRAKAL 137 (303)
Q Consensus 102 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~ 137 (303)
.+.. ......+.+..|..-...+++.+.+.++.-
T Consensus 80 ~p~~--~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~ 113 (307)
T PRK06223 80 VPRK--PGMSRDDLLGINAKIMKDVAEGIKKYAPDA 113 (307)
T ss_pred CCCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 4332 222333478899999999999888876543
No 348
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.65 E-value=0.0097 Score=51.59 Aligned_cols=98 Identities=13% Similarity=0.059 Sum_probs=65.0
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCC--CeEEEEecCCcccc-----ccC-----CCeEEEEecCCCHHHHHHHHhccCce
Q 042242 29 NVAVIFGVTGLVGKELARRLISTAN--WKVYGIARKPEITA-----IQS-----SSYCFISCDLLNPLDIKRKLTLLEDV 96 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~-----~~~-----~~~~~~~~D~~~~~~l~~~~~~~~~V 96 (303)
++|.|.|+ |.+|..++..|+ ..| .+|.++++++.... +.. ....+.. .+ . +.++++|.|
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~-~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d---~-~~l~~aDiV 71 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALL-LRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GD---Y-ADCKGADVV 71 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHH-HcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CC---H-HHhCCCCEE
Confidence 37999996 999999999998 566 57999999875432 110 1111111 22 2 357888866
Q ss_pred eEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCc
Q 042242 97 THIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKAL 137 (303)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~ 137 (303)
+.++....... .+..+....|......+++.+.+.++.-
T Consensus 72 iita~~~~~~~--~~r~dl~~~n~~i~~~~~~~l~~~~~~g 110 (308)
T cd05292 72 VITAGANQKPG--ETRLDLLKRNVAIFKEIIPQILKYAPDA 110 (308)
T ss_pred EEccCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 66655443322 2233478999999999999998876543
No 349
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=96.63 E-value=0.012 Score=50.97 Aligned_cols=105 Identities=11% Similarity=0.037 Sum_probs=64.0
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCcccc---c--cCCCe-EEEEecCCCHHHHHHHHhccCceeEEee
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITA---I--QSSSY-CFISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~---~--~~~~~-~~~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
++|.|+|+ |++|..++..|+ ..|+ +|+++++.+.... . ..+.. ......+.-..++.+ ++++|.|+.+++
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la-~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-~~~aDiVIitag 78 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLA-EKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-TANSDIVVITAG 78 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHH-HcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-hCCCCEEEEcCC
Confidence 58999995 999999999998 5565 8999998654321 0 00000 000011111112333 677776666655
Q ss_pred cccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCcc
Q 042242 102 VTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALK 138 (303)
Q Consensus 102 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~ 138 (303)
.+.. ...+..+.+..|......+++.+.+..+..+
T Consensus 79 ~p~~--~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~ 113 (305)
T TIGR01763 79 LPRK--PGMSREDLLSMNAGIVREVTGRIMEHSPNPI 113 (305)
T ss_pred CCCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeE
Confidence 4322 2223344789999999999999988765443
No 350
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.61 E-value=0.043 Score=47.61 Aligned_cols=105 Identities=10% Similarity=0.008 Sum_probs=67.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCC--CeEEEEecCCcccc-----cc-----CCCeEEEEecCCCHHHHHHHHhccCc
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTAN--WKVYGIARKPEITA-----IQ-----SSSYCFISCDLLNPLDIKRKLTLLED 95 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~-----~~-----~~~~~~~~~D~~~~~~l~~~~~~~~~ 95 (303)
..||.|+|+ |.||+.++..|+ ..+ -++.+++.++.... +. .....+... .| .+ .++++|.
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~-~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~d---y~-~~~~adi 74 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISIL-AKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KD---YS-VTANSKV 74 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHH-hcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CC---HH-HhCCCCE
Confidence 359999995 999999999997 334 35999998765432 00 011122211 12 22 4788886
Q ss_pred eeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEE
Q 042242 96 VTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSL 142 (303)
Q Consensus 96 V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~ 142 (303)
|+..++.... ...+..+.+..|..-...+.+.+.+.+++-..++.
T Consensus 75 vvitaG~~~k--~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivv 119 (312)
T cd05293 75 VIVTAGARQN--EGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVV 119 (312)
T ss_pred EEECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEc
Confidence 6665655332 22334458999999999999999988665544433
No 351
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.56 E-value=0.0095 Score=46.61 Aligned_cols=55 Identities=25% Similarity=0.210 Sum_probs=43.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEe
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIF 100 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~ 100 (303)
...+++|+|+|+++.+|..+++.|. ..|.+|+++.|+. +.+.+.++++|.||.+.
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~-~~g~~V~v~~r~~--------------------~~l~~~l~~aDiVIsat 95 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLL-NRNATVTVCHSKT--------------------KNLKEHTKQADIVIVAV 95 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHh-hCCCEEEEEECCc--------------------hhHHHHHhhCCEEEEcC
Confidence 3467999999986678999999998 6788898888763 34667888888666553
No 352
>PRK04148 hypothetical protein; Provisional
Probab=96.56 E-value=0.0043 Score=46.27 Aligned_cols=62 Identities=18% Similarity=0.158 Sum_probs=48.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccC
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLE 94 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~ 94 (303)
+++|++.| .| -|..++..|. +.|++|++++.++.... .....++++..|+.++.. ++-+++|
T Consensus 17 ~~kileIG-~G-fG~~vA~~L~-~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~--~~y~~a~ 79 (134)
T PRK04148 17 NKKIVELG-IG-FYFKVAKKLK-ESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNL--EIYKNAK 79 (134)
T ss_pred CCEEEEEE-ec-CCHHHHHHHH-HCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCH--HHHhcCC
Confidence 46899999 67 8999999998 68999999999987533 234567899999998764 3445555
No 353
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.51 E-value=0.0052 Score=56.33 Aligned_cols=68 Identities=16% Similarity=0.013 Sum_probs=48.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc------ccCCCeEEEEecCCCHHHHHHHHhccCceeEEe
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA------IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIF 100 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~ 100 (303)
++|+|+|+|+++ +|..+++.|+ +.|++|++.++...... ....++.++.+|..+ +.+.+.|.|++.+
T Consensus 4 ~~k~v~iiG~g~-~G~~~A~~l~-~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv~~~ 76 (450)
T PRK14106 4 KGKKVLVVGAGV-SGLALAKFLK-KLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-----EFLEGVDLVVVSP 76 (450)
T ss_pred CCCEEEEECCCH-HHHHHHHHHH-HCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEEECC
Confidence 468999999766 9999999999 79999999999753211 123367777777766 2345566566554
Q ss_pred e
Q 042242 101 W 101 (303)
Q Consensus 101 ~ 101 (303)
+
T Consensus 77 g 77 (450)
T PRK14106 77 G 77 (450)
T ss_pred C
Confidence 3
No 354
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=96.49 E-value=0.029 Score=46.76 Aligned_cols=110 Identities=12% Similarity=-0.040 Sum_probs=65.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCe-EEEEecCCccc-cccCCCe--EEEEecCCCHHHHHHHHhccCceeEEeec
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWK-VYGIARKPEIT-AIQSSSY--CFISCDLLNPLDIKRKLTLLEDVTHIFWV 102 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~-~~~~~~~--~~~~~D~~~~~~l~~~~~~~~~V~~~~~~ 102 (303)
.+-||.|+||+|.||+.|...|..+.... ..+.+-...+. ......+ .-......-.+.++..++++|.|+.-|+.
T Consensus 27 ~~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIPAGV 106 (345)
T KOG1494|consen 27 RGLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVIPAGV 106 (345)
T ss_pred CcceEEEEecCCccCccHHHHHhcCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEecCCC
Confidence 35699999999999999988775222222 22222221110 0000000 01112334346899999999965544444
Q ss_pred ccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCcc
Q 042242 103 TWASQFASDMHKCCEQNKAMMCNALNAILPRAKALK 138 (303)
Q Consensus 103 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~ 138 (303)
+.+......+.+++|..-...+..++.+.|++..
T Consensus 107 --PRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~ 140 (345)
T KOG1494|consen 107 --PRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNAL 140 (345)
T ss_pred --CCCCCCcHHHhhhcchHHHHHHHHHHHhhCccce
Confidence 2333233334899999999999999998877643
No 355
>PLN02602 lactate dehydrogenase
Probab=96.48 E-value=0.0088 Score=52.60 Aligned_cols=104 Identities=11% Similarity=0.060 Sum_probs=68.2
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCC--eEEEEecCCcccc-----cc-----CCCeEEEEecCCCHHHHHHHHhccCce
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANW--KVYGIARKPEITA-----IQ-----SSSYCFISCDLLNPLDIKRKLTLLEDV 96 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~-----~~-----~~~~~~~~~D~~~~~~l~~~~~~~~~V 96 (303)
+||.|+|+ |.||+.++..|+ ..+. ++.+++.++.... +. .....+ .++ .+ . +.++++|.|
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~-~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i-~~~-~d---y-~~~~daDiV 109 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTIL-TQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKI-LAS-TD---Y-AVTAGSDLC 109 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHH-hCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEE-EeC-CC---H-HHhCCCCEE
Confidence 59999995 999999999998 3443 6999998775432 00 111222 211 12 2 348888866
Q ss_pred eEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEEEE
Q 042242 97 THIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHVSL 142 (303)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~~~ 142 (303)
+.+++.+.. ...+..+.+..|..-...+.+.+.+.++.-+.++.
T Consensus 110 VitAG~~~k--~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivv 153 (350)
T PLN02602 110 IVTAGARQI--PGESRLNLLQRNVALFRKIIPELAKYSPDTILLIV 153 (350)
T ss_pred EECCCCCCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 666655322 22334458999999999999999988766544433
No 356
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.46 E-value=0.042 Score=49.77 Aligned_cols=98 Identities=11% Similarity=-0.026 Sum_probs=63.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcC---C----CeEEEEecC--Ccccc-----------ccCCCeEEEEecCCCHHHHH
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTA---N----WKVYGIARK--PEITA-----------IQSSSYCFISCDLLNPLDIK 87 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~---g----~~V~~~~r~--~~~~~-----------~~~~~~~~~~~D~~~~~~l~ 87 (303)
.-+|+||||+|.||.+|+-.|. ++ | ..+.+++.. ..... ....++.+. .| -.
T Consensus 123 p~~V~vtgAag~i~Y~l~~~ia-~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~~------~~ 194 (452)
T cd05295 123 PLQVCITNASAPLCYHLIPSLA-SGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-TD------LD 194 (452)
T ss_pred ceEEEEecCcHHHHHHHHHHHh-CCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-EC------CH
Confidence 4689999999999999999998 32 2 235555553 21110 011123222 11 13
Q ss_pred HHHhccCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccC
Q 042242 88 RKLTLLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAK 135 (303)
Q Consensus 88 ~~~~~~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~ 135 (303)
+.|+++|+|+.+++.+ .....+..+.++.|..-+..+..++.+..+
T Consensus 195 ea~~daDvvIitag~p--rk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~ 240 (452)
T cd05295 195 VAFKDAHVIVLLDDFL--IKEGEDLEGCIRSRVAICQLYGPLIEKNAK 240 (452)
T ss_pred HHhCCCCEEEECCCCC--CCcCCCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 6888888666665543 333334455899999999999999998755
No 357
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=96.36 E-value=0.0077 Score=55.23 Aligned_cols=68 Identities=19% Similarity=0.198 Sum_probs=52.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---ccCCCeEEEEecCCCHHHHHHH-HhccCce
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---IQSSSYCFISCDLLNPLDIKRK-LTLLEDV 96 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~D~~~~~~l~~~-~~~~~~V 96 (303)
..++|+|+|+ |.+|+.+++.|. ..|++|+++++++.... ....++.++.+|..+.+.++++ ++.++.|
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~-~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~v 301 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLE-KEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAF 301 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-hCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEE
Confidence 4589999995 999999999998 68999999999876532 1224678899999999887554 3444433
No 358
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=96.36 E-value=0.0054 Score=54.03 Aligned_cols=35 Identities=23% Similarity=0.376 Sum_probs=28.6
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEE-ecCC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGI-ARKP 63 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~-~r~~ 63 (303)
++|.|+||||++|..+++.|.+..+++++.+ +++.
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~ 36 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRE 36 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccch
Confidence 4799999999999999999996568887754 5443
No 359
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=96.35 E-value=0.048 Score=48.54 Aligned_cols=97 Identities=10% Similarity=-0.020 Sum_probs=62.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCC-------eEEEE--ecCCcccc-----c------cCCCeEEEEecCCCHHHHH
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANW-------KVYGI--ARKPEITA-----I------QSSSYCFISCDLLNPLDIK 87 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~-------~V~~~--~r~~~~~~-----~------~~~~~~~~~~D~~~~~~l~ 87 (303)
.-||.|+||+|.+|..++-.|. ..+. .++++ +++.+... + ...++.+... + .
T Consensus 44 p~KV~IIGAaG~VG~~~A~~l~-~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~---~----y 115 (387)
T TIGR01757 44 TVNVAVSGAAGMISNHLLFMLA-SGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGID---P----Y 115 (387)
T ss_pred CeEEEEECCCcHHHHHHHHHHH-hccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecC---C----H
Confidence 4699999999999999999998 3332 23333 66554432 0 0112211111 1 3
Q ss_pred HHHhccCceeEEeecccccCChHHHHHHHHHHHHHHHHHHHHHhhcc
Q 042242 88 RKLTLLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRA 134 (303)
Q Consensus 88 ~~~~~~~~V~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~ 134 (303)
+.++++|.|+..++.+ .....+..+.+..|..-+..+...+.++.
T Consensus 116 ~~~kdaDIVVitAG~p--rkpg~tR~dll~~N~~I~k~i~~~I~~~a 160 (387)
T TIGR01757 116 EVFEDADWALLIGAKP--RGPGMERADLLDINGQIFADQGKALNAVA 160 (387)
T ss_pred HHhCCCCEEEECCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5788888666666543 22333445589999999999999999864
No 360
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=96.34 E-value=0.073 Score=46.39 Aligned_cols=102 Identities=15% Similarity=0.070 Sum_probs=66.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCcccc---c--------cCCCeEEEEecCCCHHHHHHHHhccCc
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITA---I--------QSSSYCFISCDLLNPLDIKRKLTLLED 95 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~---~--------~~~~~~~~~~D~~~~~~l~~~~~~~~~ 95 (303)
.+||.|+| +|.+|+.++..++ ..|. +|.++++++.... . .....++.. ..| . +.++++|.
T Consensus 6 ~~KI~IIG-aG~vG~~ia~~la-~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d---~-~~l~~aDi 77 (321)
T PTZ00082 6 RRKISLIG-SGNIGGVMAYLIV-LKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNN---Y-EDIAGSDV 77 (321)
T ss_pred CCEEEEEC-CCHHHHHHHHHHH-hCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCC---H-HHhCCCCE
Confidence 36999999 6999999999887 5675 7999999876431 0 011122221 122 2 36788887
Q ss_pred eeEEeecccccCC---hHHHHHHHHHHHHHHHHHHHHHhhccCCc
Q 042242 96 VTHIFWVTWASQF---ASDMHKCCEQNKAMMCNALNAILPRAKAL 137 (303)
Q Consensus 96 V~~~~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~~~~~~~~~~ 137 (303)
|+..+........ ..+..+.+..|..-...+++.+.+.++.-
T Consensus 78 VI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a 122 (321)
T PTZ00082 78 VIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNA 122 (321)
T ss_pred EEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 7777654322111 01334578889999999999998887654
No 361
>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed
Probab=96.28 E-value=0.02 Score=51.10 Aligned_cols=65 Identities=20% Similarity=0.192 Sum_probs=50.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCc
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLED 95 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~ 95 (303)
+++|+|+|+ |.+|+.+++.+. +.|++|++++..+........ -..+.+|..|.+.+.+..+.+|.
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~-~lG~~v~~~d~~~~~pa~~~a-d~~~~~~~~D~~~l~~~a~~~dv 66 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAA-PLGYKVIVLDPDPDSPAAQVA-DEVIVADYDDVAALRELAEQCDV 66 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHH-HcCCEEEEEeCCCCCchhHhC-ceEEecCCCCHHHHHHHHhcCCE
Confidence 368999995 899999999998 689999999987654221111 13556899999999999988874
No 362
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=96.27 E-value=0.0072 Score=56.97 Aligned_cols=61 Identities=18% Similarity=0.172 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHH
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRK 89 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~ 89 (303)
+..+|+|+| .|-+|+.+++.|. +.|++|+++++++++.. ....+..++.+|.+|++.++++
T Consensus 416 ~~~hiiI~G-~G~~G~~la~~L~-~~g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a 477 (558)
T PRK10669 416 ICNHALLVG-YGRVGSLLGEKLL-AAGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLA 477 (558)
T ss_pred cCCCEEEEC-CChHHHHHHHHHH-HCCCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhc
Confidence 356899999 7999999999998 68999999999887643 3346888999999998877653
No 363
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=96.25 E-value=0.0066 Score=49.90 Aligned_cols=37 Identities=35% Similarity=0.276 Sum_probs=32.4
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
++|.|+||+|.+|+.++..|. +.|++|++.+|++++.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~-~~G~~V~v~~r~~~~~ 37 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLA-KAGNKIIIGSRDLEKA 37 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHH-hCCCEEEEEEcCHHHH
Confidence 379999999999999999998 6789999999987553
No 364
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=96.24 E-value=0.0088 Score=52.53 Aligned_cols=33 Identities=30% Similarity=0.438 Sum_probs=25.4
Q ss_pred EEEEEcCCChhHHHHHHHHhhcCCCeE---EEEecCC
Q 042242 30 VAVIFGVTGLVGKELARRLISTANWKV---YGIARKP 63 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~g~~V---~~~~r~~ 63 (303)
+|.|.||||++|..|++.|. +.+|.+ ..+.+..
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~-~~~hp~~~l~~~as~~ 36 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILE-ERNFPIDKLVLLASDR 36 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHH-hCCCChhhEEEEeccc
Confidence 58999999999999999997 556663 3444543
No 365
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=96.24 E-value=0.011 Score=51.66 Aligned_cols=33 Identities=24% Similarity=0.328 Sum_probs=25.5
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCC---eEEEEecC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANW---KVYGIARK 62 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~---~V~~~~r~ 62 (303)
.+|.|+||||++|..+++.|. +.+| ++..+...
T Consensus 5 ~~IaIvGATG~vG~eLlrlL~-~~~hP~~~l~~v~s~ 40 (336)
T PRK05671 5 LDIAVVGATGTVGEALVQILE-ERDFPVGTLHLLASS 40 (336)
T ss_pred CEEEEEccCCHHHHHHHHHHh-hCCCCceEEEEEECc
Confidence 689999999999999999998 3343 44455443
No 366
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=96.23 E-value=0.0093 Score=44.21 Aligned_cols=69 Identities=17% Similarity=0.283 Sum_probs=41.5
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCe-EEEEecCCccccccCCCeE-EE---EecCCCHHHHHHHHhccCceeEE
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWK-VYGIARKPEITAIQSSSYC-FI---SCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~~~~~~~~~-~~---~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
++|.|.|++|.+|+.+++.+.+..+++ |-+++|+++... ..++- +. ...+.-.+++++.++.+|+++..
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~--g~d~g~~~~~~~~~~~v~~~l~~~~~~~DVvIDf 74 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKV--GKDVGELAGIGPLGVPVTDDLEELLEEADVVIDF 74 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTT--TSBCHHHCTSST-SSBEBS-HHHHTTH-SEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccc--cchhhhhhCcCCcccccchhHHHhcccCCEEEEc
Confidence 379999999999999999999668999 555666652211 00000 00 01111124567788888866555
No 367
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=96.23 E-value=0.018 Score=50.69 Aligned_cols=77 Identities=13% Similarity=0.053 Sum_probs=50.1
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHhhcCC-CeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHh----ccCceeE
Q 042242 24 EVDAKNVAVIFGVTGLVGKELARRLISTAN-WKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLT----LLEDVTH 98 (303)
Q Consensus 24 ~~~~~~~vlVtGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~----~~~~V~~ 98 (303)
....+++|||.||+|.+|+..++-.. ..+ ..|++.++.+........+.. ...|+.+.+..++..+ +.|.|+.
T Consensus 154 ~~~~g~~vLv~ggsggVG~~aiQlAk-~~~~~~v~t~~s~e~~~l~k~lGAd-~vvdy~~~~~~e~~kk~~~~~~DvVlD 231 (347)
T KOG1198|consen 154 KLSKGKSVLVLGGSGGVGTAAIQLAK-HAGAIKVVTACSKEKLELVKKLGAD-EVVDYKDENVVELIKKYTGKGVDVVLD 231 (347)
T ss_pred ccCCCCeEEEEeCCcHHHHHHHHHHH-hcCCcEEEEEcccchHHHHHHcCCc-EeecCCCHHHHHHHHhhcCCCccEEEE
Confidence 34456799999999999999998887 567 445555554433222333433 2378888766666655 3566777
Q ss_pred Eeec
Q 042242 99 IFWV 102 (303)
Q Consensus 99 ~~~~ 102 (303)
+.+.
T Consensus 232 ~vg~ 235 (347)
T KOG1198|consen 232 CVGG 235 (347)
T ss_pred CCCC
Confidence 7554
No 368
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.22 E-value=0.0096 Score=47.21 Aligned_cols=63 Identities=22% Similarity=0.276 Sum_probs=44.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCcee
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLEDVT 97 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~ 97 (303)
...+++|.|+| .|-||+.+++.|. .-|.+|++.+|...... .....+. ..+++++++.+|.|+
T Consensus 33 ~l~g~tvgIiG-~G~IG~~vA~~l~-~fG~~V~~~d~~~~~~~~~~~~~~~--------~~~l~ell~~aDiv~ 96 (178)
T PF02826_consen 33 ELRGKTVGIIG-YGRIGRAVARRLK-AFGMRVIGYDRSPKPEEGADEFGVE--------YVSLDELLAQADIVS 96 (178)
T ss_dssp -STTSEEEEES-TSHHHHHHHHHHH-HTT-EEEEEESSCHHHHHHHHTTEE--------ESSHHHHHHH-SEEE
T ss_pred ccCCCEEEEEE-EcCCcCeEeeeee-cCCceeEEecccCChhhhcccccce--------eeehhhhcchhhhhh
Confidence 44689999999 7999999999998 78999999999886532 1111121 124667888888533
No 369
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=96.17 E-value=0.015 Score=51.94 Aligned_cols=36 Identities=22% Similarity=0.337 Sum_probs=32.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKP 63 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 63 (303)
..++|.|.||.|.+|..++..|. ..|++|++.+|++
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~-~~G~~V~~~d~~~ 132 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLT-LSGYQVRILEQDD 132 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHH-HCCCeEEEeCCCc
Confidence 34789999999999999999998 6899999999863
No 370
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=96.11 E-value=0.0069 Score=51.66 Aligned_cols=75 Identities=16% Similarity=0.049 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--ccCCCeEEEEecCCCHHHHHHHHhccCceeEEeec
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWV 102 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~ 102 (303)
+...++|-|||||.|..++++|+ ..|..-.+-.|+..+.. -...+.++-..++-+++.+++.+...++|+|++++
T Consensus 5 ~e~d~iiYGAtGy~G~lvae~l~-~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVlncvGP 81 (382)
T COG3268 5 REYDIIIYGATGYAGGLVAEYLA-REGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVLNCVGP 81 (382)
T ss_pred cceeEEEEccccchhHHHHHHHH-HcCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEEecccc
Confidence 34689999999999999999999 67777766677765543 11122233333444588899999999999999654
No 371
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.09 E-value=0.0054 Score=47.29 Aligned_cols=69 Identities=16% Similarity=0.086 Sum_probs=43.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcC-CCeEEEEecCCccccc--cCCCeEEEEecCCCHHHHHHHHhccCceeEEe
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTA-NWKVYGIARKPEITAI--QSSSYCFISCDLLNPLDIKRKLTLLEDVTHIF 100 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~~--~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~ 100 (303)
.+++|+|+|+ |.+|..+++.|. .. +++|++.+|++.+... ...+...+..+..+.+ +.++++|.|+.+.
T Consensus 18 ~~~~i~iiG~-G~~g~~~a~~l~-~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dvvi~~~ 89 (155)
T cd01065 18 KGKKVLILGA-GGAARAVAYALA-ELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDLE---ELLAEADLIINTT 89 (155)
T ss_pred CCCEEEEECC-cHHHHHHHHHHH-HCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecchh---hccccCCEEEeCc
Confidence 4579999996 999999999998 45 4789999998655321 1111111123344433 3467777666553
No 372
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=96.08 E-value=0.015 Score=49.73 Aligned_cols=68 Identities=18% Similarity=0.169 Sum_probs=47.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCceeEE
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
...+++|+|+| .|.+|+.+++.|. ..|++|++.+|++.+.. ....+...+ ..+.+.+.++++|.|+++
T Consensus 148 ~l~gk~v~IiG-~G~iG~avA~~L~-~~G~~V~v~~R~~~~~~~~~~~g~~~~-----~~~~l~~~l~~aDiVint 216 (287)
T TIGR02853 148 TIHGSNVMVLG-FGRTGMTIARTFS-ALGARVFVGARSSADLARITEMGLIPF-----PLNKLEEKVAEIDIVINT 216 (287)
T ss_pred CCCCCEEEEEc-ChHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHCCCeee-----cHHHHHHHhccCCEEEEC
Confidence 33578999999 5999999999998 67899999999875422 111122221 234567788888866665
No 373
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=96.07 E-value=0.016 Score=49.99 Aligned_cols=100 Identities=11% Similarity=0.065 Sum_probs=66.3
Q ss_pred EEEEcCCChhHHHHHHHHhhcCC--CeEEEEecCCcccc---cc-----C--CCeEEEEecCCCHHHHHHHHhccCceeE
Q 042242 31 AVIFGVTGLVGKELARRLISTAN--WKVYGIARKPEITA---IQ-----S--SSYCFISCDLLNPLDIKRKLTLLEDVTH 98 (303)
Q Consensus 31 vlVtGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~---~~-----~--~~~~~~~~D~~~~~~l~~~~~~~~~V~~ 98 (303)
|.|.|+ |.+|+.++..|+ ..| .+++++++++.... .. . ...++... .+ .+.++++|.|+.
T Consensus 1 i~iiGa-G~VG~~~a~~l~-~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~aDiVIi 72 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALI-AKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD----YADAADADIVVI 72 (300)
T ss_pred CEEECC-CHHHHHHHHHHH-hcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC----HHHhCCCCEEEE
Confidence 468895 899999999998 456 57999999876542 00 0 11122211 12 348888887777
Q ss_pred EeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEE
Q 042242 99 IFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHV 140 (303)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~ 140 (303)
+++.+... ..+..+.+..|..-...+.+.+++.++.-..+
T Consensus 73 tag~p~~~--~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~vi 112 (300)
T cd00300 73 TAGAPRKP--GETRLDLINRNAPILRSVITNLKKYGPDAIIL 112 (300)
T ss_pred cCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 76654322 22334478999999999999999887555443
No 374
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=96.07 E-value=0.015 Score=50.13 Aligned_cols=37 Identities=24% Similarity=0.278 Sum_probs=30.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKP 63 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 63 (303)
|+.||.|.||+|+.|..|++.|......+++..+.+.
T Consensus 1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~ 37 (349)
T COG0002 1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISSRE 37 (349)
T ss_pred CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechh
Confidence 3579999999999999999999966778866666544
No 375
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated
Probab=96.05 E-value=0.034 Score=50.01 Aligned_cols=68 Identities=18% Similarity=0.242 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHh--ccCcee
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLT--LLEDVT 97 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~--~~~~V~ 97 (303)
..|+|+|+| +|..|+.++..+. +.|++|++++..+........+ .++.+|..|.+.+.+.++ .+|.|+
T Consensus 11 ~~~~ilIiG-~g~~~~~~~~a~~-~~G~~v~~~~~~~~~~~~~~ad-~~~~~~~~d~~~l~~~~~~~~id~vi 80 (395)
T PRK09288 11 SATRVMLLG-SGELGKEVAIEAQ-RLGVEVIAVDRYANAPAMQVAH-RSHVIDMLDGDALRAVIEREKPDYIV 80 (395)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-HCCCEEEEEeCCCCCchHHhhh-heEECCCCCHHHHHHHHHHhCCCEEE
Confidence 457999999 5899999999988 6899999999876542211111 245678889988888887 455333
No 376
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=95.99 E-value=0.011 Score=47.30 Aligned_cols=35 Identities=31% Similarity=0.346 Sum_probs=29.4
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI 65 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 65 (303)
|++.|.| +|.||+.|+.+|. ..||+|++-.|+.++
T Consensus 2 ~~~~i~G-tGniG~alA~~~a-~ag~eV~igs~r~~~ 36 (211)
T COG2085 2 MIIAIIG-TGNIGSALALRLA-KAGHEVIIGSSRGPK 36 (211)
T ss_pred cEEEEec-cChHHHHHHHHHH-hCCCeEEEecCCChh
Confidence 4666666 9999999999999 689999888777665
No 377
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.99 E-value=0.022 Score=48.60 Aligned_cols=54 Identities=20% Similarity=0.219 Sum_probs=41.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEe
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIF 100 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~ 100 (303)
..+|+|+|+|++|.+|+.++..|+ ..|..|+++.|+. ..+.+.++.+|.|+++.
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~-~~gatVtv~~~~t--------------------~~L~~~~~~aDIvI~At 210 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLL-NANATVTICHSRT--------------------QNLPELVKQADIIVGAV 210 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHH-hCCCEEEEEeCCc--------------------hhHHHHhccCCEEEEcc
Confidence 357899999999999999999998 5777888877632 23556667888677664
No 378
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=95.91 E-value=0.022 Score=49.11 Aligned_cols=66 Identities=20% Similarity=0.187 Sum_probs=48.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCceeEE
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
.+++|+|+| .|.+|+.+++.|. ..|.+|++.+|++.... ....+.+++ ..+.+.+.++++|.||++
T Consensus 151 ~g~kvlViG-~G~iG~~~a~~L~-~~Ga~V~v~~r~~~~~~~~~~~G~~~~-----~~~~l~~~l~~aDiVI~t 217 (296)
T PRK08306 151 HGSNVLVLG-FGRTGMTLARTLK-ALGANVTVGARKSAHLARITEMGLSPF-----HLSELAEEVGKIDIIFNT 217 (296)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHcCCeee-----cHHHHHHHhCCCCEEEEC
Confidence 468999999 5889999999998 67889999999865432 122233332 234567788888877775
No 379
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.86 E-value=0.078 Score=46.57 Aligned_cols=36 Identities=28% Similarity=0.309 Sum_probs=30.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCC
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKP 63 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~ 63 (303)
.+.++|+|.|+ |.+|++++..|. ..|. +|++++++.
T Consensus 22 L~~~~VlVvG~-GglGs~va~~La-~aGvg~i~lvD~D~ 58 (339)
T PRK07688 22 LREKHVLIIGA-GALGTANAEMLV-RAGVGKVTIVDRDY 58 (339)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHH-HcCCCeEEEEeCCc
Confidence 35679999995 999999999998 5787 699999864
No 380
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.82 E-value=0.031 Score=47.51 Aligned_cols=55 Identities=18% Similarity=0.203 Sum_probs=43.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEee
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
..+++|+|+|+++.+|+.++..|+ ..|..|+.+.++. ..+.+.++.+|.|+...+
T Consensus 156 l~Gk~vvVIGrs~~VG~pla~lL~-~~gatVtv~~s~t--------------------~~l~~~~~~ADIVIsAvg 210 (286)
T PRK14175 156 LEGKNAVVIGRSHIVGQPVSKLLL-QKNASVTILHSRS--------------------KDMASYLKDADVIVSAVG 210 (286)
T ss_pred CCCCEEEEECCCchhHHHHHHHHH-HCCCeEEEEeCCc--------------------hhHHHHHhhCCEEEECCC
Confidence 467899999999999999999998 6788999887653 136678888886655543
No 381
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=95.78 E-value=0.018 Score=54.80 Aligned_cols=65 Identities=17% Similarity=0.213 Sum_probs=52.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHH-HhccC
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRK-LTLLE 94 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~-~~~~~ 94 (303)
..+|+|+| .|-+|+.+++.|. +.|++++++++++.... ....+..++.+|.++++.++++ +++++
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~-~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~ 466 (601)
T PRK03659 400 KPQVIIVG-FGRFGQVIGRLLM-ANKMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAE 466 (601)
T ss_pred cCCEEEec-CchHHHHHHHHHH-hCCCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCC
Confidence 46899999 7999999999998 68999999999987643 3346788999999999987764 34444
No 382
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=95.73 E-value=0.0062 Score=51.98 Aligned_cols=39 Identities=15% Similarity=0.158 Sum_probs=33.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCC-CeEEEEecCCccc
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTAN-WKVYGIARKPEIT 66 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~ 66 (303)
..+++|+|+|+ |.+|+.++..|. ..| .+|+++.|+..+.
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~-~~g~~~V~v~~R~~~~a 160 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLL-DLGVAEITIVNRTVERA 160 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHH-HcCCCEEEEEeCCHHHH
Confidence 35689999995 999999999998 577 6799999987654
No 383
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.64 E-value=0.016 Score=45.17 Aligned_cols=62 Identities=19% Similarity=0.180 Sum_probs=42.2
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCceeEE
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
++|-++| .|-+|+.+++.|+ +.||+|++.+|++.+.. +...+++. + ++..++++.+|.|+-+
T Consensus 2 ~~Ig~IG-lG~mG~~~a~~L~-~~g~~v~~~d~~~~~~~~~~~~g~~~--~-----~s~~e~~~~~dvvi~~ 64 (163)
T PF03446_consen 2 MKIGFIG-LGNMGSAMARNLA-KAGYEVTVYDRSPEKAEALAEAGAEV--A-----DSPAEAAEQADVVILC 64 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHH-HTTTEEEEEESSHHHHHHHHHTTEEE--E-----SSHHHHHHHBSEEEE-
T ss_pred CEEEEEc-hHHHHHHHHHHHH-hcCCeEEeeccchhhhhhhHHhhhhh--h-----hhhhhHhhcccceEee
Confidence 6899999 6999999999999 68999999999876643 22223222 2 2355677777744443
No 384
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=95.59 E-value=0.043 Score=48.26 Aligned_cols=27 Identities=33% Similarity=0.509 Sum_probs=23.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANW 54 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~ 54 (303)
+..+|.|.||||++|..|++.|. ..+|
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~-~~~h 32 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLT-DRDF 32 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHH-hCCC
Confidence 34689999999999999999997 5555
No 385
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=95.59 E-value=0.055 Score=46.78 Aligned_cols=98 Identities=14% Similarity=0.052 Sum_probs=62.5
Q ss_pred EEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCcccc---c--cC------CCeEEEEecCCCHHHHHHHHhccCceeE
Q 042242 31 AVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITA---I--QS------SSYCFISCDLLNPLDIKRKLTLLEDVTH 98 (303)
Q Consensus 31 vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~---~--~~------~~~~~~~~D~~~~~~l~~~~~~~~~V~~ 98 (303)
|.|+|+ |.+|..++..|. ..+. +|+++++++.... . .. ....+ ... .| . +.++++|.|+.
T Consensus 1 I~IIGa-G~vG~~ia~~la-~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I-~~t-~d---~-~~l~dADiVIi 72 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLA-LKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKV-TGT-ND---Y-EDIAGSDVVVI 72 (300)
T ss_pred CEEECC-CHHHHHHHHHHH-hCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEE-EEc-CC---H-HHhCCCCEEEE
Confidence 568996 999999999887 4565 9999999875431 0 00 01111 111 12 2 35788887776
Q ss_pred EeecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCcc
Q 042242 99 IFWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALK 138 (303)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~ 138 (303)
++..+.. ......+.+..|+.-...+++.+.+.++.-.
T Consensus 73 t~g~p~~--~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~ 110 (300)
T cd01339 73 TAGIPRK--PGMSRDDLLGTNAKIVKEVAENIKKYAPNAI 110 (300)
T ss_pred ecCCCCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeE
Confidence 6654322 2233334678899999999998888765443
No 386
>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2. This enzyme is an alternative to PurN (TIGR00639)
Probab=95.57 E-value=0.048 Score=48.76 Aligned_cols=65 Identities=17% Similarity=0.243 Sum_probs=48.7
Q ss_pred EEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhc--cCcee
Q 042242 30 VAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTL--LEDVT 97 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~--~~~V~ 97 (303)
||+|+| +|..|..+++.+. +.|++|++++.++........+ ..+.+|..|.+.+.+.++. +|.|+
T Consensus 1 kililG-~g~~~~~l~~aa~-~~G~~v~~~d~~~~~~~~~~ad-~~~~~~~~d~~~l~~~~~~~~id~v~ 67 (380)
T TIGR01142 1 RVLLLG-SGELGKEVAIEAQ-RLGVEVIAVDRYANAPAMQVAH-RSYVINMLDGDALRAVIEREKPDYIV 67 (380)
T ss_pred CEEEEC-CCHHHHHHHHHHH-HcCCEEEEEeCCCCCchhhhCc-eEEEcCCCCHHHHHHHHHHhCCCEEE
Confidence 589999 6999999999998 6899999999976543221112 3456788999999888874 55343
No 387
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.56 E-value=0.054 Score=47.01 Aligned_cols=63 Identities=14% Similarity=0.125 Sum_probs=46.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCcee
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVT 97 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~ 97 (303)
...+++|.|.| .|-||+.+++.|. .-|++|++.+|.+... +++... ...+++.++++++|.|+
T Consensus 133 ~l~g~tvgIvG-~G~IG~~vA~~l~-afG~~V~~~~~~~~~~----~~~~~~----~~~~~l~e~l~~aDvvv 195 (312)
T PRK15469 133 HREDFTIGILG-AGVLGSKVAQSLQ-TWGFPLRCWSRSRKSW----PGVQSF----AGREELSAFLSQTRVLI 195 (312)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHH-HCCCEEEEEeCCCCCC----CCceee----cccccHHHHHhcCCEEE
Confidence 34678999999 8999999999998 6899999999865431 122211 12456889999999533
No 388
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.55 E-value=0.023 Score=49.84 Aligned_cols=65 Identities=17% Similarity=0.125 Sum_probs=45.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCc-eeEE
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLED-VTHI 99 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~-V~~~ 99 (303)
...+|+|.|.| .|.||+.+++.|. .-|.+|++.+|.+........++ . ..++.++++.+|. ++|+
T Consensus 147 ~L~gktvgIiG-~G~IG~~vA~~l~-~~G~~V~~~d~~~~~~~~~~~~~-----~---~~~l~ell~~aDiV~l~l 212 (333)
T PRK13243 147 DVYGKTIGIIG-FGRIGQAVARRAK-GFGMRILYYSRTRKPEAEKELGA-----E---YRPLEELLRESDFVSLHV 212 (333)
T ss_pred CCCCCEEEEEC-cCHHHHHHHHHHH-HCCCEEEEECCCCChhhHHHcCC-----E---ecCHHHHHhhCCEEEEeC
Confidence 44689999999 6999999999998 68999999998754321111111 1 1246778888885 4444
No 389
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=95.53 E-value=0.039 Score=47.88 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=31.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCc
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPE 64 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~ 64 (303)
.++|.|.| +|.+|+.+++.|. ..||+|++.+|++.
T Consensus 4 ~m~I~iiG-~G~~G~~lA~~l~-~~G~~V~~~~r~~~ 38 (308)
T PRK14619 4 PKTIAILG-AGAWGSTLAGLAS-ANGHRVRVWSRRSG 38 (308)
T ss_pred CCEEEEEC-ccHHHHHHHHHHH-HCCCEEEEEeCCCC
Confidence 46899999 7999999999998 68999999999764
No 390
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=95.52 E-value=0.036 Score=37.40 Aligned_cols=34 Identities=32% Similarity=0.447 Sum_probs=30.3
Q ss_pred EEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc
Q 042242 30 VAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI 65 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 65 (303)
+|+|.| +|++|-.++..|. ..|.+|+++.|.+.-
T Consensus 1 ~vvViG-gG~ig~E~A~~l~-~~g~~vtli~~~~~~ 34 (80)
T PF00070_consen 1 RVVVIG-GGFIGIELAEALA-ELGKEVTLIERSDRL 34 (80)
T ss_dssp EEEEES-SSHHHHHHHHHHH-HTTSEEEEEESSSSS
T ss_pred CEEEEC-cCHHHHHHHHHHH-HhCcEEEEEeccchh
Confidence 588999 6999999999998 689999999998754
No 391
>PLN02948 phosphoribosylaminoimidazole carboxylase
Probab=95.49 E-value=0.084 Score=49.87 Aligned_cols=68 Identities=12% Similarity=0.124 Sum_probs=51.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCce
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDV 96 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V 96 (303)
.++|+|+|+| +|.+|+.+++.+. +.|++|++++.++.......-+ ..+.++..|.+.+.++.+.+|.|
T Consensus 20 ~~~k~IgIIG-gGqlg~mla~aA~-~lG~~Vi~ld~~~~apa~~~AD-~~~v~~~~D~~~l~~~a~~~dvI 87 (577)
T PLN02948 20 VSETVVGVLG-GGQLGRMLCQAAS-QMGIKVKVLDPLEDCPASSVAA-RHVVGSFDDRAAVREFAKRCDVL 87 (577)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHH-HCCCEEEEEeCCCCCchhhhCc-eeeeCCCCCHHHHHHHHHHCCEE
Confidence 4678999999 6899999999998 6899999999876532211111 24458899999988888887743
No 392
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=95.49 E-value=0.035 Score=49.41 Aligned_cols=72 Identities=14% Similarity=0.028 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccccc-CCCeEEEEecCCCHHHHHHHHhccCceeEEe
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQ-SSSYCFISCDLLNPLDIKRKLTLLEDVTHIF 100 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~ 100 (303)
..++|+|+|+ |-+|...++.|. ..|.+|++++|++.+.... ...-..+..+..+.+.+.+.++++|.|+.+.
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~-~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~ 238 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMAN-GLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAV 238 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHH-HCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEcc
Confidence 3568999995 999999999998 6788999999986543211 1111123345667788888999888777664
No 393
>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]
Probab=95.49 E-value=0.073 Score=46.40 Aligned_cols=64 Identities=17% Similarity=0.172 Sum_probs=51.0
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLED 95 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~ 95 (303)
++|.|+| +|++|+-++..-. .-|++|++++-.+......- --.++..+.+|.+.+++..+.+|+
T Consensus 2 ~tvgIlG-GGQLgrMm~~aa~-~lG~~v~vLdp~~~~PA~~v-a~~~i~~~~dD~~al~ela~~~DV 65 (375)
T COG0026 2 KTVGILG-GGQLGRMMALAAA-RLGIKVIVLDPDADAPAAQV-ADRVIVAAYDDPEALRELAAKCDV 65 (375)
T ss_pred CeEEEEc-CcHHHHHHHHHHH-hcCCEEEEecCCCCCchhhc-ccceeecCCCCHHHHHHHHhhCCE
Confidence 6899999 6999999999998 78999999998766533110 113566788899999999999985
No 394
>PLN02928 oxidoreductase family protein
Probab=95.48 E-value=0.035 Score=48.91 Aligned_cols=69 Identities=19% Similarity=0.066 Sum_probs=46.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccccc-----CCCeEEEEecCCCHHHHHHHHhccCc
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQ-----SSSYCFISCDLLNPLDIKRKLTLLED 95 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~D~~~~~~l~~~~~~~~~ 95 (303)
...+|+|.|.| .|-||+.+++.|. .-|.+|++.+|........ ...+..+........++.++++.+|.
T Consensus 156 ~l~gktvGIiG-~G~IG~~vA~~l~-afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDi 229 (347)
T PLN02928 156 TLFGKTVFILG-YGAIGIELAKRLR-PFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADI 229 (347)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHh-hCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCE
Confidence 45689999999 7999999999998 7899999999864321100 00111110011134568899999995
No 395
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=95.42 E-value=0.051 Score=49.19 Aligned_cols=35 Identities=29% Similarity=0.360 Sum_probs=31.4
Q ss_pred EEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 30 VAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
+|.|+| .|++|..++..|. +.||+|++.++++.+.
T Consensus 2 kI~vIG-lG~~G~~lA~~La-~~G~~V~~~d~~~~~v 36 (411)
T TIGR03026 2 KIAVIG-LGYVGLPLAALLA-DLGHEVTGVDIDQEKV 36 (411)
T ss_pred EEEEEC-CCchhHHHHHHHH-hcCCeEEEEECCHHHH
Confidence 799999 7999999999998 6899999999987654
No 396
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.42 E-value=0.22 Score=37.35 Aligned_cols=34 Identities=26% Similarity=0.385 Sum_probs=27.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCC
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKP 63 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~ 63 (303)
.++|+|.| .|-+|+.++..|. ..|. ++++++.+.
T Consensus 2 ~~~v~iiG-~G~vGs~va~~L~-~~Gv~~i~lvD~d~ 36 (135)
T PF00899_consen 2 NKRVLIIG-AGGVGSEVAKNLA-RSGVGKITLVDDDI 36 (135)
T ss_dssp T-EEEEES-TSHHHHHHHHHHH-HHTTSEEEEEESSB
T ss_pred CCEEEEEC-cCHHHHHHHHHHH-HhCCCceeecCCcc
Confidence 46999999 6999999999998 5676 499998753
No 397
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=95.41 E-value=0.028 Score=41.40 Aligned_cols=31 Identities=39% Similarity=0.616 Sum_probs=26.8
Q ss_pred EEEEEcCCChhHHHHHHHHhhcCCCeEEEEe
Q 042242 30 VAVIFGVTGLVGKELARRLISTANWKVYGIA 60 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~ 60 (303)
++.|+|++|.+|..++..|....++++.++.
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~ 31 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALA 31 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEE
Confidence 5889999999999999999855789988873
No 398
>PRK08818 prephenate dehydrogenase; Provisional
Probab=95.40 E-value=0.042 Score=48.71 Aligned_cols=35 Identities=31% Similarity=0.356 Sum_probs=30.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecC
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARK 62 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~ 62 (303)
.++|.|.|.+|.||..+++.|.+..+++|++.++.
T Consensus 4 ~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~ 38 (370)
T PRK08818 4 QPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPA 38 (370)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCC
Confidence 57999999999999999999984358899999885
No 399
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=95.38 E-value=0.032 Score=39.11 Aligned_cols=62 Identities=24% Similarity=0.237 Sum_probs=40.0
Q ss_pred EEEEEcCCChhHHHHHHHHhhcCC---CeEEEE-ecCCccccc--cCCCeEEEEecCCCHHHHHHHHhccCceeEE
Q 042242 30 VAVIFGVTGLVGKELARRLISTAN---WKVYGI-ARKPEITAI--QSSSYCFISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~g---~~V~~~-~r~~~~~~~--~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
||.|+| +|.+|..|++.|+ ..| ++|+.. .|++.+... ..-++.+... +..++++.+|.|+.+
T Consensus 1 kI~iIG-~G~mg~al~~~l~-~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~------~~~~~~~~advvila 68 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLL-ASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD------DNEEAAQEADVVILA 68 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHH-HTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE------EHHHHHHHTSEEEE-
T ss_pred CEEEEC-CCHHHHHHHHHHH-HCCCCceeEEeeccCcHHHHHHHHHhhccccccC------ChHHhhccCCEEEEE
Confidence 578887 8999999999999 678 899966 777765431 1122232221 244577777754444
No 400
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=95.37 E-value=0.046 Score=48.26 Aligned_cols=34 Identities=18% Similarity=0.333 Sum_probs=27.4
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCe---EEEEecC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWK---VYGIARK 62 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~---V~~~~r~ 62 (303)
.+|.|.||||++|+.+++.|+.+..+. ++.++..
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~ 38 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTS 38 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecch
Confidence 589999999999999999666577776 6665553
No 401
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.34 E-value=0.047 Score=46.70 Aligned_cols=39 Identities=26% Similarity=0.330 Sum_probs=34.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCc
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPE 64 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~ 64 (303)
...+|+|.|+|.+|.+|+.++..|+ +.|+.|++..|+..
T Consensus 156 ~l~Gk~V~vIG~s~ivG~PmA~~L~-~~gatVtv~~~~t~ 194 (301)
T PRK14194 156 DLTGKHAVVIGRSNIVGKPMAALLL-QAHCSVTVVHSRST 194 (301)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHH-HCCCEEEEECCCCC
Confidence 3468999999999999999999999 68999999977653
No 402
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.33 E-value=0.16 Score=44.61 Aligned_cols=37 Identities=24% Similarity=0.247 Sum_probs=30.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCC
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKP 63 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~ 63 (303)
..+.++|+|+| .|.+|+++++.|. ..|+ ++++++++.
T Consensus 21 ~L~~~~VlIiG-~GglGs~va~~La-~aGvg~i~lvD~D~ 58 (338)
T PRK12475 21 KIREKHVLIVG-AGALGAANAEALV-RAGIGKLTIADRDY 58 (338)
T ss_pred hhcCCcEEEEC-CCHHHHHHHHHHH-HcCCCEEEEEcCCc
Confidence 33567999999 5889999999999 6787 599999875
No 403
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=95.32 E-value=0.026 Score=53.87 Aligned_cols=65 Identities=15% Similarity=0.166 Sum_probs=52.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHH-HhccC
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRK-LTLLE 94 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~-~~~~~ 94 (303)
.++|+|+| .|-+|+.+++.|. +.|+++++++.++.... ....+..++.+|.++++.++++ +++++
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~-~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~ 466 (621)
T PRK03562 400 QPRVIIAG-FGRFGQIVGRLLL-SSGVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAE 466 (621)
T ss_pred cCcEEEEe-cChHHHHHHHHHH-hCCCCEEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCC
Confidence 46899999 7999999999998 68999999999987654 3345788999999999977653 33444
No 404
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=95.31 E-value=0.092 Score=41.77 Aligned_cols=76 Identities=14% Similarity=0.019 Sum_probs=47.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCC-HHHHHHHHhccCceeEEee
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLN-PLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~-~~~l~~~~~~~~~V~~~~~ 101 (303)
...+|+|+|.|.+..+|+.|+..|+ +.|..|+.++.+.........+.........| ...+.+.++.+|.|+-..+
T Consensus 59 ~l~GK~vvVIGrS~iVGkPla~lL~-~~~AtVti~~~~~~~~~~~~~~~~hs~t~~~~~~~~l~~~~~~ADIVIsAvG 135 (197)
T cd01079 59 RLYGKTITIINRSEVVGRPLAALLA-NDGARVYSVDINGIQVFTRGESIRHEKHHVTDEEAMTLDCLSQSDVVITGVP 135 (197)
T ss_pred CCCCCEEEEECCCccchHHHHHHHH-HCCCEEEEEecCcccccccccccccccccccchhhHHHHHhhhCCEEEEccC
Confidence 4568999999999999999999998 68889998865432210000000011111122 2246778888885554433
No 405
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=95.30 E-value=0.095 Score=39.65 Aligned_cols=54 Identities=20% Similarity=0.185 Sum_probs=41.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEE
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
+..+|+|+|.|.+.-+|..++..|. +.|..|+.+.++.. ++++.++.+|.|+-.
T Consensus 25 ~~~gk~v~VvGrs~~vG~pla~lL~-~~gatV~~~~~~t~--------------------~l~~~v~~ADIVvsA 78 (140)
T cd05212 25 RLDGKKVLVVGRSGIVGAPLQCLLQ-RDGATVYSCDWKTI--------------------QLQSKVHDADVVVVG 78 (140)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEeCCCCc--------------------CHHHHHhhCCEEEEe
Confidence 4467999999999999999999998 67888888765432 255677778744444
No 406
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=95.29 E-value=0.037 Score=47.82 Aligned_cols=37 Identities=22% Similarity=0.323 Sum_probs=30.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKP 63 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 63 (303)
|+.+|.|.||||++|..|++.|......++..+..+.
T Consensus 1 ~~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~ 37 (313)
T PRK11863 1 MKPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAK 37 (313)
T ss_pred CCcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 4579999999999999999999855666777776554
No 407
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=95.23 E-value=0.098 Score=40.51 Aligned_cols=55 Identities=20% Similarity=0.164 Sum_probs=37.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEe
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIF 100 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~ 100 (303)
+..+|+|+|.|.++.+|+.|+..|. +.|..|+....+.. .+++.++.+|.|+-..
T Consensus 33 ~l~Gk~v~VvGrs~~VG~Pla~lL~-~~~atVt~~h~~T~--------------------~l~~~~~~ADIVVsa~ 87 (160)
T PF02882_consen 33 DLEGKKVVVVGRSNIVGKPLAMLLL-NKGATVTICHSKTK--------------------NLQEITRRADIVVSAV 87 (160)
T ss_dssp STTT-EEEEE-TTTTTHHHHHHHHH-HTT-EEEEE-TTSS--------------------SHHHHHTTSSEEEE-S
T ss_pred CCCCCEEEEECCcCCCChHHHHHHH-hCCCeEEeccCCCC--------------------cccceeeeccEEeeee
Confidence 3468999999999999999999998 67777776554432 2556777777544443
No 408
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=95.21 E-value=0.02 Score=49.73 Aligned_cols=67 Identities=13% Similarity=0.072 Sum_probs=45.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--ccCCCeEEEEecCCCHHHHHHHHhccCceeEE
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
.+++|+|+|+ |-+|..+++.|...++.+|++++|++.+.. ...-+..+ .+.+.+.+.+..+|.|+.+
T Consensus 177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~-----~~~~~~~~~l~~aDvVi~a 245 (311)
T cd05213 177 KGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNA-----VPLDELLELLNEADVVISA 245 (311)
T ss_pred cCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeE-----EeHHHHHHHHhcCCEEEEC
Confidence 4689999995 999999999998434467999999876532 11112222 2334566778888755555
No 409
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=95.21 E-value=0.019 Score=45.80 Aligned_cols=36 Identities=28% Similarity=0.362 Sum_probs=28.0
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
|+|.|.| .||+|..++..|. ..||+|++++.++...
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA-~~G~~V~g~D~~~~~v 36 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALA-EKGHQVIGVDIDEEKV 36 (185)
T ss_dssp -EEEEE---STTHHHHHHHHH-HTTSEEEEE-S-HHHH
T ss_pred CEEEEEC-CCcchHHHHHHHH-hCCCEEEEEeCChHHH
Confidence 5899998 8999999999998 7899999999887653
No 410
>TIGR01771 L-LDH-NAD L-lactate dehydrogenase. This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.
Probab=95.19 E-value=0.23 Score=42.88 Aligned_cols=97 Identities=12% Similarity=0.023 Sum_probs=63.3
Q ss_pred EEcCCChhHHHHHHHHhhcCCC--eEEEEecCCcccc-----c------cCCCeEEEEecCCCHHHHHHHHhccCceeEE
Q 042242 33 IFGVTGLVGKELARRLISTANW--KVYGIARKPEITA-----I------QSSSYCFISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 33 VtGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~-----~------~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
|.| +|.||+.++..|+ ..+. ++.++++.+.... + ....+.+.. .+ .+.++++|.|+..
T Consensus 1 iIG-aG~VG~~~a~~l~-~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~----~~~~~daDivVit 71 (299)
T TIGR01771 1 IIG-AGNVGSSTAFALL-NQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRS---GD----YSDCKDADLVVIT 71 (299)
T ss_pred CCC-cCHHHHHHHHHHH-hcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEec---CC----HHHHCCCCEEEEC
Confidence 467 5999999999998 3443 5999998765432 0 111222221 22 3578888866666
Q ss_pred eecccccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccEE
Q 042242 100 FWVTWASQFASDMHKCCEQNKAMMCNALNAILPRAKALKHV 140 (303)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~~ 140 (303)
++.+.. ...+..+.+..|..-...+.+.+.++++.-+.+
T Consensus 72 ag~~rk--~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vi 110 (299)
T TIGR01771 72 AGAPQK--PGETRLELVGRNVRIMKSIVPEVVKSGFDGIFL 110 (299)
T ss_pred CCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 654322 223344589999999999999999886654433
No 411
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=95.18 E-value=0.019 Score=51.71 Aligned_cols=73 Identities=14% Similarity=0.120 Sum_probs=49.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEeec
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWV 102 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~~ 102 (303)
..+++|+|+| +|-+|+.++..|. ..|. +|++..|+..+.......+. .+.....+.+.+.+..+|.||++...
T Consensus 179 l~~kkvlviG-aG~~a~~va~~L~-~~g~~~I~V~nRt~~ra~~La~~~~--~~~~~~~~~l~~~l~~aDiVI~aT~a 252 (414)
T PRK13940 179 ISSKNVLIIG-AGQTGELLFRHVT-ALAPKQIMLANRTIEKAQKITSAFR--NASAHYLSELPQLIKKADIIIAAVNV 252 (414)
T ss_pred ccCCEEEEEc-CcHHHHHHHHHHH-HcCCCEEEEECCCHHHHHHHHHHhc--CCeEecHHHHHHHhccCCEEEECcCC
Confidence 3568999999 5999999999998 5675 59999998765431111110 01223345667888889877777443
No 412
>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP.
Probab=95.17 E-value=0.065 Score=47.46 Aligned_cols=63 Identities=19% Similarity=0.219 Sum_probs=48.0
Q ss_pred EEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCc
Q 042242 30 VAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLED 95 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~ 95 (303)
+|+|+|+ |.+|+.+++.+. +.|++|++++.++........+ +.+.+|..|.+.+.+..+.+|+
T Consensus 1 ~igiiG~-gql~~~l~~aa~-~lG~~v~~~d~~~~~p~~~~ad-~~~~~~~~d~~~i~~~a~~~dv 63 (352)
T TIGR01161 1 TVGILGG-GQLGRMLALAAR-PLGIKVHVLDPDANSPAVQVAD-HVVLAPFFDPAAIRELAESCDV 63 (352)
T ss_pred CEEEECC-CHHHHHHHHHHH-HcCCEEEEECCCCCCChhHhCc-eeEeCCCCCHHHHHHHHhhCCE
Confidence 4899995 899999999998 6899999999876443211112 2346789999999998888873
No 413
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=95.11 E-value=0.094 Score=47.93 Aligned_cols=74 Identities=15% Similarity=0.034 Sum_probs=50.3
Q ss_pred CCCCCEEEEEcC----------------CChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHH
Q 042242 25 VDAKNVAVIFGV----------------TGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKR 88 (303)
Q Consensus 25 ~~~~~~vlVtGa----------------tG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~ 88 (303)
...+++||||+| ||-.|.+|++.+. ..|.+|+.+.-.-. .. ...+++++.++ ..+++.+
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~-~~GA~VtlI~Gp~~-~~-~p~~v~~i~V~--ta~eM~~ 327 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAA-AAGAEVTLISGPVD-LA-DPQGVKVIHVE--SARQMLA 327 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHH-HCCCcEEEEeCCcC-CC-CCCCceEEEec--CHHHHHH
Confidence 367899999986 7999999999999 79999999984322 11 23456666544 4444444
Q ss_pred HHhc---cCceeEEeecc
Q 042242 89 KLTL---LEDVTHIFWVT 103 (303)
Q Consensus 89 ~~~~---~~~V~~~~~~~ 103 (303)
++.. .|.+|+.|+.+
T Consensus 328 av~~~~~~Di~I~aAAVa 345 (475)
T PRK13982 328 AVEAALPADIAIFAAAVA 345 (475)
T ss_pred HHHhhCCCCEEEEecccc
Confidence 4432 45577776554
No 414
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=95.05 E-value=0.063 Score=46.76 Aligned_cols=66 Identities=20% Similarity=0.214 Sum_probs=46.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCc-eeEE
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLED-VTHI 99 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~-V~~~ 99 (303)
..++|+|-|.| .|-||+.+++.|. .-|.+|++.++..+.......+ ..-.+++.++|+.+|. ++|+
T Consensus 139 el~gkTvGIiG-~G~IG~~va~~l~-afgm~v~~~d~~~~~~~~~~~~-------~~~~~~Ld~lL~~sDiv~lh~ 205 (324)
T COG0111 139 ELAGKTVGIIG-LGRIGRAVAKRLK-AFGMKVIGYDPYSPRERAGVDG-------VVGVDSLDELLAEADILTLHL 205 (324)
T ss_pred cccCCEEEEEC-CCHHHHHHHHHHH-hCCCeEEEECCCCchhhhcccc-------ceecccHHHHHhhCCEEEEcC
Confidence 44689999999 7999999999998 7899999999944332211111 1122457789999985 4454
No 415
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=94.98 E-value=0.04 Score=47.46 Aligned_cols=37 Identities=24% Similarity=0.478 Sum_probs=32.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI 65 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 65 (303)
|.++|.|+| .|.+|..+++.|. ..|++|++.+|++.+
T Consensus 1 ~~~~IgviG-~G~mG~~~a~~l~-~~g~~v~~~d~~~~~ 37 (296)
T PRK11559 1 MTMKVGFIG-LGIMGKPMSKNLL-KAGYSLVVYDRNPEA 37 (296)
T ss_pred CCceEEEEc-cCHHHHHHHHHHH-HCCCeEEEEcCCHHH
Confidence 346899999 7999999999998 689999999988754
No 416
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=94.94 E-value=0.052 Score=47.50 Aligned_cols=59 Identities=15% Similarity=0.144 Sum_probs=43.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCc
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLED 95 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~ 95 (303)
...+++|.|+| .|.||+.+++.|. ..|++|++.+|.+.... . .. .-..++.++++.+|.
T Consensus 143 ~l~g~~VgIIG-~G~IG~~vA~~L~-~~G~~V~~~d~~~~~~~----~--~~----~~~~~l~ell~~aDi 201 (330)
T PRK12480 143 PVKNMTVAIIG-TGRIGAATAKIYA-GFGATITAYDAYPNKDL----D--FL----TYKDSVKEAIKDADI 201 (330)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHH-hCCCEEEEEeCChhHhh----h--hh----hccCCHHHHHhcCCE
Confidence 44678999999 7999999999998 68999999998764311 0 00 111247788999884
No 417
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=94.88 E-value=0.06 Score=43.52 Aligned_cols=39 Identities=23% Similarity=0.249 Sum_probs=33.4
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI 65 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 65 (303)
+..+|+|+|+|. |.+|+++++.|. +.|++|++.++++..
T Consensus 25 ~l~gk~v~I~G~-G~vG~~~A~~L~-~~G~~Vvv~D~~~~~ 63 (200)
T cd01075 25 SLEGKTVAVQGL-GKVGYKLAEHLL-EEGAKLIVADINEEA 63 (200)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHH-HCCCEEEEEcCCHHH
Confidence 446789999995 899999999998 689999998887654
No 418
>PRK10537 voltage-gated potassium channel; Provisional
Probab=94.87 E-value=0.082 Score=47.35 Aligned_cols=67 Identities=13% Similarity=-0.010 Sum_probs=49.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHH-HhccCcee
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRK-LTLLEDVT 97 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~-~~~~~~V~ 97 (303)
+.+++|+| .|-+|+.+++.|. +.|++|++++.+... .....+..++.+|.+|.+.++++ ++.++.|+
T Consensus 240 k~HvII~G-~g~lg~~v~~~L~-~~g~~vvVId~d~~~-~~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI 307 (393)
T PRK10537 240 KDHFIICG-HSPLAINTYLGLR-QRGQAVTVIVPLGLE-HRLPDDADLIPGDSSDSAVLKKAGAARARAIL 307 (393)
T ss_pred CCeEEEEC-CChHHHHHHHHHH-HCCCCEEEEECchhh-hhccCCCcEEEeCCCCHHHHHhcCcccCCEEE
Confidence 46899999 6999999999998 678898888865332 22335788999999998877654 34444333
No 419
>PRK06487 glycerate dehydrogenase; Provisional
Probab=94.83 E-value=0.069 Score=46.48 Aligned_cols=60 Identities=15% Similarity=0.092 Sum_probs=44.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCc-eeEE
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLED-VTHI 99 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~-V~~~ 99 (303)
...+|+|.|.| .|-||+.+++.|. .-|.+|++.+|..... .. ...++.++++.+|. ++|+
T Consensus 145 ~l~gktvgIiG-~G~IG~~vA~~l~-~fgm~V~~~~~~~~~~-----~~--------~~~~l~ell~~sDiv~l~l 205 (317)
T PRK06487 145 ELEGKTLGLLG-HGELGGAVARLAE-AFGMRVLIGQLPGRPA-----RP--------DRLPLDELLPQVDALTLHC 205 (317)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHh-hCCCEEEEECCCCCcc-----cc--------cccCHHHHHHhCCEEEECC
Confidence 45689999999 7999999999997 6889999988753211 11 12258889999994 4444
No 420
>PRK06436 glycerate dehydrogenase; Provisional
Probab=94.83 E-value=0.069 Score=46.10 Aligned_cols=58 Identities=14% Similarity=0.104 Sum_probs=43.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCc
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLED 95 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~ 95 (303)
...+|+|.|.| .|.||+.+++.|. .-|++|++.+|+... .++... ..+++++++.+|.
T Consensus 119 ~L~gktvgIiG-~G~IG~~vA~~l~-afG~~V~~~~r~~~~-----~~~~~~------~~~l~ell~~aDi 176 (303)
T PRK06436 119 LLYNKSLGILG-YGGIGRRVALLAK-AFGMNIYAYTRSYVN-----DGISSI------YMEPEDIMKKSDF 176 (303)
T ss_pred CCCCCEEEEEC-cCHHHHHHHHHHH-HCCCEEEEECCCCcc-----cCcccc------cCCHHHHHhhCCE
Confidence 45689999999 8999999999876 679999999987432 122110 1247788888885
No 421
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=94.81 E-value=0.065 Score=46.07 Aligned_cols=34 Identities=24% Similarity=0.326 Sum_probs=28.4
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARK 62 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~ 62 (303)
-+|.|.|||||.|..|++.|......++..++-+
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~ 35 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPD 35 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecc
Confidence 3799999999999999999996677786666543
No 422
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=94.80 E-value=0.31 Score=40.75 Aligned_cols=93 Identities=18% Similarity=0.074 Sum_probs=59.9
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc---ccCCCeEEEEecCCCHHHHHHHHhccC--ceeEEeecc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA---IQSSSYCFISCDLLNPLDIKRKLTLLE--DVTHIFWVT 103 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~D~~~~~~l~~~~~~~~--~V~~~~~~~ 103 (303)
|+|||+|||+= |+.|+..|. ..|+ |++..-.+-... ...+...++.+-+.+.+.+.+.++... .|+...++
T Consensus 1 m~ILvlgGTtE-~r~la~~L~-~~g~-v~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATHP- 76 (249)
T PF02571_consen 1 MKILVLGGTTE-GRKLAERLA-EAGY-VIVSVATSYGGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATHP- 76 (249)
T ss_pred CEEEEEechHH-HHHHHHHHH-hcCC-EEEEEEhhhhHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCCc-
Confidence 58999998765 999999998 6787 554433222211 122466788888889999999998665 35554221
Q ss_pred cccCChHHHHHHHHHHHHHHHHHHHHHhhccCCccE
Q 042242 104 WASQFASDMHKCCEQNKAMMCNALNAILPRAKALKH 139 (303)
Q Consensus 104 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~~ 139 (303)
... ..+.++.++|++.+....+
T Consensus 77 ----fA~----------~is~na~~a~~~~~ipylR 98 (249)
T PF02571_consen 77 ----FAA----------EISQNAIEACRELGIPYLR 98 (249)
T ss_pred ----hHH----------HHHHHHHHHHhhcCcceEE
Confidence 111 2345688888877544433
No 423
>PRK07574 formate dehydrogenase; Provisional
Probab=94.79 E-value=0.052 Score=48.43 Aligned_cols=66 Identities=17% Similarity=0.132 Sum_probs=46.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc-cCCCeEEEEecCCCHHHHHHHHhccCc-eeEE
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI-QSSSYCFISCDLLNPLDIKRKLTLLED-VTHI 99 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~D~~~~~~l~~~~~~~~~-V~~~ 99 (303)
...+++|.|+| .|-||+.+++.|. .-|.+|++.+|....... ...++ .-..+++++++.+|+ ++|+
T Consensus 189 ~L~gktVGIvG-~G~IG~~vA~~l~-~fG~~V~~~dr~~~~~~~~~~~g~-------~~~~~l~ell~~aDvV~l~l 256 (385)
T PRK07574 189 DLEGMTVGIVG-AGRIGLAVLRRLK-PFDVKLHYTDRHRLPEEVEQELGL-------TYHVSFDSLVSVCDVVTIHC 256 (385)
T ss_pred ecCCCEEEEEC-CCHHHHHHHHHHH-hCCCEEEEECCCCCchhhHhhcCc-------eecCCHHHHhhcCCEEEEcC
Confidence 34678999999 7999999999998 689999999987532111 11122 112357788999985 3344
No 424
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=94.75 E-value=0.035 Score=48.16 Aligned_cols=35 Identities=26% Similarity=0.364 Sum_probs=31.4
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI 65 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 65 (303)
++|.|+| .|.+|..++..|+ ..|++|++.+|++..
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la-~~G~~V~v~d~~~~~ 37 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFA-RAGHEVRLWDADPAA 37 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHH-HCCCeeEEEeCCHHH
Confidence 4799999 8999999999999 689999999998753
No 425
>PRK08655 prephenate dehydrogenase; Provisional
Probab=94.74 E-value=0.042 Score=50.09 Aligned_cols=36 Identities=33% Similarity=0.356 Sum_probs=32.3
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI 65 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 65 (303)
++|.|+||+|.+|..++..|. ..|++|++.+|++..
T Consensus 1 MkI~IIGG~G~mG~slA~~L~-~~G~~V~v~~r~~~~ 36 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLK-EKGFEVIVTGRDPKK 36 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHH-HCCCEEEEEECChHH
Confidence 379999999999999999998 688999999998754
No 426
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.71 E-value=0.085 Score=45.19 Aligned_cols=37 Identities=35% Similarity=0.342 Sum_probs=32.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEe-cCC
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIA-RKP 63 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~-r~~ 63 (303)
..+|+|+|.|.+|.+|+.++..|+ +.|+.|++.. |++
T Consensus 156 ~~Gk~V~viGrs~~mG~PmA~~L~-~~g~tVtv~~~rT~ 193 (296)
T PRK14188 156 LSGLNAVVIGRSNLVGKPMAQLLL-AANATVTIAHSRTR 193 (296)
T ss_pred CCCCEEEEEcCCcchHHHHHHHHH-hCCCEEEEECCCCC
Confidence 468999999999999999999999 6899999984 543
No 427
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=94.71 E-value=0.082 Score=47.00 Aligned_cols=62 Identities=18% Similarity=0.075 Sum_probs=44.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCc-eeEE
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLED-VTHI 99 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~-V~~~ 99 (303)
...+++|.|.| .|.||+.+++.|. .-|++|++.++.... .+ +.....+++++++.+|+ ++|+
T Consensus 113 ~L~gktvGIIG-~G~IG~~vA~~l~-a~G~~V~~~dp~~~~-----~~------~~~~~~~L~ell~~sDiI~lh~ 175 (378)
T PRK15438 113 SLHDRTVGIVG-VGNVGRRLQARLE-ALGIKTLLCDPPRAD-----RG------DEGDFRSLDELVQEADILTFHT 175 (378)
T ss_pred CcCCCEEEEEC-cCHHHHHHHHHHH-HCCCEEEEECCcccc-----cc------cccccCCHHHHHhhCCEEEEeC
Confidence 34689999999 7999999999998 789999998753221 00 11122357788988884 4455
No 428
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=94.63 E-value=0.055 Score=47.66 Aligned_cols=34 Identities=21% Similarity=0.433 Sum_probs=27.6
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARK 62 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~ 62 (303)
++|.|+|+||++|++|++.|.....++|..+..+
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~ 34 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVAS 34 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEC
Confidence 3799999999999999998874455788877443
No 429
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=94.62 E-value=0.088 Score=45.71 Aligned_cols=62 Identities=18% Similarity=0.121 Sum_probs=45.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCc-eeEE
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLED-VTHI 99 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~-V~~~ 99 (303)
...+|+|.|.| .|-||+.+++.+. .-|.+|++.+|..... ...+. ..++.++++.+|. ++|+
T Consensus 142 ~L~gktvGIiG-~G~IG~~vA~~~~-~fgm~V~~~d~~~~~~---~~~~~--------~~~l~ell~~sDvv~lh~ 204 (311)
T PRK08410 142 EIKGKKWGIIG-LGTIGKRVAKIAQ-AFGAKVVYYSTSGKNK---NEEYE--------RVSLEELLKTSDIISIHA 204 (311)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHh-hcCCEEEEECCCcccc---ccCce--------eecHHHHhhcCCEEEEeC
Confidence 45789999999 8999999999997 6888999998864221 11111 2357889999994 5555
No 430
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.62 E-value=0.12 Score=43.87 Aligned_cols=55 Identities=24% Similarity=0.165 Sum_probs=41.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEee
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
..+++|+|.|.++.+|+.++..|+ ..|..|+++.++. ..+.+.++.+|.|+-..+
T Consensus 156 l~Gk~vvViGrs~iVGkPla~lL~-~~~atVt~~hs~t--------------------~~l~~~~~~ADIVV~avG 210 (285)
T PRK14189 156 LRGAHAVVIGRSNIVGKPMAMLLL-QAGATVTICHSKT--------------------RDLAAHTRQADIVVAAVG 210 (285)
T ss_pred CCCCEEEEECCCCccHHHHHHHHH-HCCCEEEEecCCC--------------------CCHHHHhhhCCEEEEcCC
Confidence 367899999999999999999998 6788888754332 125577888885554433
No 431
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=94.60 E-value=0.047 Score=48.04 Aligned_cols=35 Identities=29% Similarity=0.311 Sum_probs=31.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKP 63 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 63 (303)
|.++|.|.| +|.+|..++..|. ..|++|++++|++
T Consensus 1 ~~mkI~IiG-~G~mG~~~A~~L~-~~G~~V~~~~r~~ 35 (341)
T PRK08229 1 MMARICVLG-AGSIGCYLGGRLA-AAGADVTLIGRAR 35 (341)
T ss_pred CCceEEEEC-CCHHHHHHHHHHH-hcCCcEEEEecHH
Confidence 446899999 7999999999998 6799999999965
No 432
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.59 E-value=0.14 Score=43.75 Aligned_cols=72 Identities=14% Similarity=0.082 Sum_probs=54.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--ccCCCeEEEEecCCCHHHHHHHHhccCceeEEe
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIF 100 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~ 100 (303)
.+++|.|+|+.| +|.--++.-. .-|++|+++++...+.. ....+.+.+..-..|++.++++.+..|-++|..
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AK-AMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v 254 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAK-AMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTV 254 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHH-HhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceee
Confidence 578999999988 9988887776 78999999999864432 344567766555558888888887777666664
No 433
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=94.56 E-value=0.041 Score=49.96 Aligned_cols=67 Identities=15% Similarity=0.159 Sum_probs=46.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCcccc-c-cCCCeEEEEecCCCHHHHHHHHhccCceeEE
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITA-I-QSSSYCFISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~-~-~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
..+++|+|+| +|-+|..+++.|. ..|. +|++.+|++.+.. . ..-+. +..+.+.+.+.+.++|.|+.+
T Consensus 180 ~~~~~vlViG-aG~iG~~~a~~L~-~~G~~~V~v~~r~~~ra~~la~~~g~-----~~~~~~~~~~~l~~aDvVI~a 249 (423)
T PRK00045 180 LSGKKVLVIG-AGEMGELVAKHLA-EKGVRKITVANRTLERAEELAEEFGG-----EAIPLDELPEALAEADIVISS 249 (423)
T ss_pred ccCCEEEEEC-chHHHHHHHHHHH-HCCCCeEEEEeCCHHHHHHHHHHcCC-----cEeeHHHHHHHhccCCEEEEC
Confidence 3568999999 5999999999998 5787 6999999876532 1 11111 222335566777888866655
No 434
>PRK06849 hypothetical protein; Provisional
Probab=94.50 E-value=0.069 Score=47.98 Aligned_cols=37 Identities=24% Similarity=0.164 Sum_probs=33.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPE 64 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~ 64 (303)
++|+|||||++..+|..+++.|. +.|++|++++..+.
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~-~~G~~Vi~~d~~~~ 39 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFH-NAGHTVILADSLKY 39 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCch
Confidence 35899999999999999999998 68999999998764
No 435
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=94.48 E-value=0.14 Score=45.25 Aligned_cols=73 Identities=14% Similarity=0.048 Sum_probs=47.9
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc--------cCCCeEE-EEec-----CCCHHHHHHHHhccC
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI--------QSSSYCF-ISCD-----LLNPLDIKRKLTLLE 94 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~--------~~~~~~~-~~~D-----~~~~~~l~~~~~~~~ 94 (303)
|+|.|.| +||+|......|. +.||+|++++.++.+... -.++++- ++-+ +.-..+.+.+++..|
T Consensus 1 MkI~viG-tGYVGLv~g~~lA-~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~ad 78 (414)
T COG1004 1 MKITVIG-TGYVGLVTGACLA-ELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAVKDAD 78 (414)
T ss_pred CceEEEC-CchHHHHHHHHHH-HcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHHhcCC
Confidence 5799999 8999999999998 789999999988766431 1122211 1111 222234667888888
Q ss_pred ceeEEeecc
Q 042242 95 DVTHIFWVT 103 (303)
Q Consensus 95 ~V~~~~~~~ 103 (303)
.+|.+.+++
T Consensus 79 v~fIavgTP 87 (414)
T COG1004 79 VVFIAVGTP 87 (414)
T ss_pred EEEEEcCCC
Confidence 655554443
No 436
>PLN00203 glutamyl-tRNA reductase
Probab=94.47 E-value=0.045 Score=50.78 Aligned_cols=69 Identities=19% Similarity=0.172 Sum_probs=46.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCccccc---cCCCeEEEEecCCCHHHHHHHHhccCceeEE
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITAI---QSSSYCFISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
..+++|+|+|+ |-+|..+++.|. ..|+ +|+++.|+..+... ..++..+.. ...+++.+.+.++|.||.+
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~-~~G~~~V~V~nRs~era~~La~~~~g~~i~~---~~~~dl~~al~~aDVVIsA 336 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLV-SKGCTKMVVVNRSEERVAALREEFPDVEIIY---KPLDEMLACAAEADVVFTS 336 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHH-hCCCCeEEEEeCCHHHHHHHHHHhCCCceEe---ecHhhHHHHHhcCCEEEEc
Confidence 44689999995 999999999998 5776 59999998766431 112222222 2233456778888855544
No 437
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=94.44 E-value=0.11 Score=46.42 Aligned_cols=62 Identities=23% Similarity=0.229 Sum_probs=44.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCc-eeEE
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLED-VTHI 99 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~-V~~~ 99 (303)
...+++|.|.| .|.||+.+++.|. .-|++|++.++..... ... ....++.++++.+|. ++|+
T Consensus 113 ~l~gktvGIIG-~G~IG~~va~~l~-a~G~~V~~~Dp~~~~~---~~~--------~~~~~l~ell~~aDiV~lh~ 175 (381)
T PRK00257 113 DLAERTYGVVG-AGHVGGRLVRVLR-GLGWKVLVCDPPRQEA---EGD--------GDFVSLERILEECDVISLHT 175 (381)
T ss_pred CcCcCEEEEEC-CCHHHHHHHHHHH-HCCCEEEEECCccccc---ccC--------ccccCHHHHHhhCCEEEEeC
Confidence 34678999999 7999999999998 6899999988643211 000 112347788888884 5555
No 438
>PRK06932 glycerate dehydrogenase; Provisional
Probab=94.44 E-value=0.096 Score=45.52 Aligned_cols=61 Identities=18% Similarity=0.122 Sum_probs=44.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCc-eeEE
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLED-VTHI 99 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~-V~~~ 99 (303)
...+|+|.|.| .|-||+.+++.|. .-|.+|++.+|..... . + ....++.++++.+|. ++|+
T Consensus 144 ~l~gktvgIiG-~G~IG~~va~~l~-~fg~~V~~~~~~~~~~------~-----~-~~~~~l~ell~~sDiv~l~~ 205 (314)
T PRK06932 144 DVRGSTLGVFG-KGCLGTEVGRLAQ-ALGMKVLYAEHKGASV------C-----R-EGYTPFEEVLKQADIVTLHC 205 (314)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHh-cCCCEEEEECCCcccc------c-----c-cccCCHHHHHHhCCEEEEcC
Confidence 45689999999 7999999999997 6889999887653210 0 0 012358889999994 4454
No 439
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=94.44 E-value=0.097 Score=45.19 Aligned_cols=64 Identities=13% Similarity=0.140 Sum_probs=45.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCceeE
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLEDVTH 98 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~ 98 (303)
...+|+|.|+| -|-||+.+++.|. ..|++|++..|...... ....++++ .++.++++.+|.|+.
T Consensus 13 ~LkgKtVGIIG-~GsIG~amA~nL~-d~G~~ViV~~r~~~s~~~A~~~G~~v--------~sl~Eaak~ADVV~l 77 (335)
T PRK13403 13 LLQGKTVAVIG-YGSQGHAQAQNLR-DSGVEVVVGVRPGKSFEVAKADGFEV--------MSVSEAVRTAQVVQM 77 (335)
T ss_pred hhCcCEEEEEe-EcHHHHHHHHHHH-HCcCEEEEEECcchhhHHHHHcCCEE--------CCHHHHHhcCCEEEE
Confidence 44679999999 8999999999998 68999998877533211 11223432 147789999985333
No 440
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=94.38 E-value=0.16 Score=44.64 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=28.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCe---EEEEecC
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWK---VYGIARK 62 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~---V~~~~r~ 62 (303)
+.+|.|.||||++|+.+++.|.....++ +..+...
T Consensus 5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~ 42 (347)
T PRK06728 5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSK 42 (347)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECc
Confidence 4689999999999999999998457777 5555543
No 441
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=94.35 E-value=0.05 Score=43.16 Aligned_cols=34 Identities=26% Similarity=0.467 Sum_probs=29.0
Q ss_pred EEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc
Q 042242 30 VAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI 65 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 65 (303)
+|.|.|+ |.+|+.++..++ ..|++|++.++++..
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a-~~G~~V~l~d~~~~~ 34 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFA-RAGYEVTLYDRSPEA 34 (180)
T ss_dssp EEEEES--SHHHHHHHHHHH-HTTSEEEEE-SSHHH
T ss_pred CEEEEcC-CHHHHHHHHHHH-hCCCcEEEEECChHH
Confidence 6899995 999999999999 689999999998764
No 442
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=94.33 E-value=0.057 Score=48.90 Aligned_cols=38 Identities=16% Similarity=0.258 Sum_probs=33.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA 67 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~ 67 (303)
.++|.|+| .|++|..++..|. +.||+|++.++++.+..
T Consensus 3 ~~kI~VIG-lG~~G~~~A~~La-~~G~~V~~~D~~~~~v~ 40 (415)
T PRK11064 3 FETISVIG-LGYIGLPTAAAFA-SRQKQVIGVDINQHAVD 40 (415)
T ss_pred ccEEEEEC-cchhhHHHHHHHH-hCCCEEEEEeCCHHHHH
Confidence 36899999 7999999999998 68999999999876543
No 443
>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein. Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein.
Probab=94.29 E-value=0.4 Score=44.90 Aligned_cols=72 Identities=15% Similarity=0.142 Sum_probs=53.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCe-EEEEecCCcccc------------ccCCCeEEEEecCCCHHHHHHHHhcc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWK-VYGIARKPEITA------------IQSSSYCFISCDLLNPLDIKRKLTLL 93 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~~------------~~~~~~~~~~~D~~~~~~l~~~~~~~ 93 (303)
...+|+|+| .|.+|++++..|+ ..|.. +++++-+..... .-.+++.+-..|....+++.+++++.
T Consensus 128 R~akVlVlG-~Gg~~s~lv~sL~-~sG~~~I~~vd~D~v~SNlnRIgEl~e~A~~~n~~v~v~~i~~~~~~dl~ev~~~~ 205 (637)
T TIGR03693 128 RNAKILAAG-SGDFLTKLVRSLI-DSGFPRFHAIVTDAEEHALDRIHELAEIAEETDDALLVQEIDFAEDQHLHEAFEPA 205 (637)
T ss_pred hcccEEEEe-cCchHHHHHHHHH-hcCCCcEEEEeccccchhhhHHHHHHHHHHHhCCCCceEeccCCcchhHHHhhcCC
Confidence 456999999 7889999999999 57766 877754433210 11346666667778888999999999
Q ss_pred CceeEEe
Q 042242 94 EDVTHIF 100 (303)
Q Consensus 94 ~~V~~~~ 100 (303)
|.|++++
T Consensus 206 DiVi~vs 212 (637)
T TIGR03693 206 DWVLYVS 212 (637)
T ss_pred cEEEEEC
Confidence 9777774
No 444
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=94.26 E-value=0.05 Score=46.09 Aligned_cols=37 Identities=14% Similarity=0.159 Sum_probs=31.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCC---CeEEEEecCCcc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTAN---WKVYGIARKPEI 65 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g---~~V~~~~r~~~~ 65 (303)
|+++|.|+| .|.+|..+++.|. +.| ++|++.+|++.+
T Consensus 1 ~mm~I~iIG-~G~mG~~la~~l~-~~g~~~~~v~v~~r~~~~ 40 (267)
T PRK11880 1 MMKKIGFIG-GGNMASAIIGGLL-ASGVPAKDIIVSDPSPEK 40 (267)
T ss_pred CCCEEEEEe-chHHHHHHHHHHH-hCCCCcceEEEEcCCHHH
Confidence 346899999 6999999999998 566 689999998654
No 445
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=94.26 E-value=0.088 Score=45.80 Aligned_cols=36 Identities=25% Similarity=0.228 Sum_probs=31.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPE 64 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~ 64 (303)
+.++|+|.| +|-||..++..|. +.|++|+++.|++.
T Consensus 4 ~~m~I~IiG-~GaiG~~lA~~L~-~~g~~V~~~~r~~~ 39 (313)
T PRK06249 4 ETPRIGIIG-TGAIGGFYGAMLA-RAGFDVHFLLRSDY 39 (313)
T ss_pred cCcEEEEEC-CCHHHHHHHHHHH-HCCCeEEEEEeCCH
Confidence 346899998 7999999999998 68999999999763
No 446
>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=94.26 E-value=0.095 Score=47.33 Aligned_cols=63 Identities=14% Similarity=0.113 Sum_probs=45.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCc-eeEE
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLED-VTHI 99 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~-V~~~ 99 (303)
...+|+|.|.| .|-||+.+++.+. .-|.+|++.+|.+... ..++. ...+++++++.+|. ++|+
T Consensus 148 ~L~gktvGIiG-~G~IG~~vA~~~~-~fGm~V~~~d~~~~~~---~~~~~-------~~~~l~ell~~sDiVslh~ 211 (409)
T PRK11790 148 EVRGKTLGIVG-YGHIGTQLSVLAE-SLGMRVYFYDIEDKLP---LGNAR-------QVGSLEELLAQSDVVSLHV 211 (409)
T ss_pred cCCCCEEEEEC-CCHHHHHHHHHHH-HCCCEEEEECCCcccc---cCCce-------ecCCHHHHHhhCCEEEEcC
Confidence 45789999999 8999999999998 7899999999764211 01111 12257789999984 4554
No 447
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=94.20 E-value=0.048 Score=47.61 Aligned_cols=35 Identities=31% Similarity=0.319 Sum_probs=30.9
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI 65 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 65 (303)
++|.|+| .|.+|+.++..|. ..|++|++.+|++..
T Consensus 2 mkI~iiG-~G~mG~~~a~~L~-~~g~~V~~~~r~~~~ 36 (325)
T PRK00094 2 MKIAVLG-AGSWGTALAIVLA-RNGHDVTLWARDPEQ 36 (325)
T ss_pred CEEEEEC-CCHHHHHHHHHHH-hCCCEEEEEECCHHH
Confidence 4799999 6999999999998 689999999997654
No 448
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=94.18 E-value=0.053 Score=46.39 Aligned_cols=69 Identities=13% Similarity=0.023 Sum_probs=44.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCccccccCCC----eEEEEecCCCHHHHHHHHhccCceeEE
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITAIQSSS----YCFISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~----~~~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
.+++|+|+| +|..|+.++..|. ..|. +|+++.|+..+....... ..+. .+...+.+...+..+|.||++
T Consensus 124 ~~k~vlvlG-aGGaarai~~aL~-~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~--~~~~~~~~~~~~~~~DiVIna 197 (282)
T TIGR01809 124 AGFRGLVIG-AGGTSRAAVYALA-SLGVTDITVINRNPDKLSRLVDLGVQVGVIT--RLEGDSGGLAIEKAAEVLVST 197 (282)
T ss_pred CCceEEEEc-CcHHHHHHHHHHH-HcCCCeEEEEeCCHHHHHHHHHHhhhcCcce--eccchhhhhhcccCCCEEEEC
Confidence 467999999 5999999999998 5776 499999987654311111 1111 122223344555667767777
No 449
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.16 E-value=0.16 Score=43.20 Aligned_cols=33 Identities=30% Similarity=0.338 Sum_probs=30.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEE
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGI 59 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~ 59 (303)
..+|+|.|.|.+|.+|+.++..|+ +.|+.|++.
T Consensus 156 l~Gk~v~vIG~S~ivG~Pla~lL~-~~gatVtv~ 188 (284)
T PRK14179 156 LEGKHAVVIGRSNIVGKPMAQLLL-DKNATVTLT 188 (284)
T ss_pred CCCCEEEEECCCCcCcHHHHHHHH-HCCCEEEEE
Confidence 368999999999999999999999 689999876
No 450
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=94.14 E-value=0.55 Score=38.77 Aligned_cols=35 Identities=17% Similarity=0.172 Sum_probs=29.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCe-EEEEecCC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWK-VYGIARKP 63 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~-V~~~~r~~ 63 (303)
+.++|+|.| .|.+|+++++.|. ..|.. +++++.+.
T Consensus 20 ~~~~VlivG-~GglGs~va~~La-~~Gvg~i~lvD~D~ 55 (228)
T cd00757 20 KNARVLVVG-AGGLGSPAAEYLA-AAGVGKLGLVDDDV 55 (228)
T ss_pred hCCcEEEEC-CCHHHHHHHHHHH-HcCCCEEEEEcCCE
Confidence 567999999 7999999999998 56765 88887653
No 451
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=94.14 E-value=0.092 Score=45.34 Aligned_cols=35 Identities=20% Similarity=0.369 Sum_probs=31.2
Q ss_pred EEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 30 VAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
+|.|+| .|.+|..+++.|. +.|++|++.+|++.+.
T Consensus 2 ~Ig~IG-lG~mG~~la~~L~-~~g~~V~~~dr~~~~~ 36 (298)
T TIGR00872 2 QLGLIG-LGRMGANIVRRLA-KRGHDCVGYDHDQDAV 36 (298)
T ss_pred EEEEEc-chHHHHHHHHHHH-HCCCEEEEEECCHHHH
Confidence 799999 7999999999998 6899999999987654
No 452
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.13 E-value=0.18 Score=42.86 Aligned_cols=55 Identities=16% Similarity=0.200 Sum_probs=42.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEee
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
..+|+|+|+|.+..+|+.++..|+ ..+..|+...++.. .+.+.++.+|.|+...+
T Consensus 157 l~Gk~vvViGrs~iVG~Pla~lL~-~~~atVtv~hs~T~--------------------~l~~~~~~ADIvi~avG 211 (285)
T PRK10792 157 TYGLNAVVVGASNIVGRPMSLELL-LAGCTVTVCHRFTK--------------------NLRHHVRNADLLVVAVG 211 (285)
T ss_pred CCCCEEEEECCCcccHHHHHHHHH-HCCCeEEEEECCCC--------------------CHHHHHhhCCEEEEcCC
Confidence 357999999999999999999998 67888888765421 25677788886555543
No 453
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=94.13 E-value=0.09 Score=40.59 Aligned_cols=62 Identities=21% Similarity=0.227 Sum_probs=41.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCceeEE
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
.+|+++|+| -|.+|+-+++.|. ..|.+|++...+|.... ....++++. .++++++..| ||..
T Consensus 22 ~Gk~vvV~G-YG~vG~g~A~~lr-~~Ga~V~V~e~DPi~alqA~~dGf~v~--------~~~~a~~~ad-i~vt 84 (162)
T PF00670_consen 22 AGKRVVVIG-YGKVGKGIARALR-GLGARVTVTEIDPIRALQAAMDGFEVM--------TLEEALRDAD-IFVT 84 (162)
T ss_dssp TTSEEEEE---SHHHHHHHHHHH-HTT-EEEEE-SSHHHHHHHHHTT-EEE---------HHHHTTT-S-EEEE
T ss_pred CCCEEEEeC-CCcccHHHHHHHh-hCCCEEEEEECChHHHHHhhhcCcEec--------CHHHHHhhCC-EEEE
Confidence 478999999 8999999999998 68999999999886542 122455543 2567787777 4443
No 454
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=94.12 E-value=0.11 Score=48.51 Aligned_cols=66 Identities=15% Similarity=0.073 Sum_probs=45.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCc-eeEE
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLED-VTHI 99 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~-V~~~ 99 (303)
...+|+|.|.| .|.||+.+++.|. .-|++|++.+|..........++.. .++++++++.+|. ++|+
T Consensus 135 ~l~gktvgIiG-~G~IG~~vA~~l~-~fG~~V~~~d~~~~~~~~~~~g~~~-------~~~l~ell~~aDvV~l~l 201 (525)
T TIGR01327 135 ELYGKTLGVIG-LGRIGSIVAKRAK-AFGMKVLAYDPYISPERAEQLGVEL-------VDDLDELLARADFITVHT 201 (525)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHH-hCCCEEEEECCCCChhHHHhcCCEE-------cCCHHHHHhhCCEEEEcc
Confidence 45679999999 7999999999998 6899999999853321111112221 1247788888884 4444
No 455
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=94.08 E-value=0.07 Score=48.38 Aligned_cols=67 Identities=18% Similarity=0.157 Sum_probs=46.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCC-CeEEEEecCCcccc-c-cCCCeEEEEecCCCHHHHHHHHhccCceeEE
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTAN-WKVYGIARKPEITA-I-QSSSYCFISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~-~-~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
..+++|+|+|+ |-+|..+++.|. ..| .+|++++|+..+.. . ..-+...+ +.+++.+.+.++|.|+.+
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~-~~G~~~V~v~~rs~~ra~~la~~~g~~~i-----~~~~l~~~l~~aDvVi~a 247 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLL-RKGVGKILIANRTYERAEDLAKELGGEAV-----KFEDLEEYLAEADIVISS 247 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHH-HCCCCEEEEEeCCHHHHHHHHHHcCCeEe-----eHHHHHHHHhhCCEEEEC
Confidence 35689999995 999999999998 567 67999999876532 1 11111222 234567788888865555
No 456
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=94.08 E-value=0.47 Score=36.44 Aligned_cols=37 Identities=16% Similarity=0.274 Sum_probs=32.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI 65 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 65 (303)
..+|+|-|+-|-+|+++++.+. .++|-|.-++-.+..
T Consensus 3 agrVivYGGkGALGSacv~~Fk-annywV~siDl~eNe 39 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFK-ANNYWVLSIDLSENE 39 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHH-hcCeEEEEEeecccc
Confidence 4689999999999999999998 789988888876543
No 457
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=94.07 E-value=0.13 Score=46.40 Aligned_cols=62 Identities=23% Similarity=0.217 Sum_probs=43.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc-cCCCeEEEEecCCCHHHHHHHHhccCceeE
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI-QSSSYCFISCDLLNPLDIKRKLTLLEDVTH 98 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~ 98 (303)
.+++|+|+| .|.||+.+++.|. ..|.+|+++++++.+... ...++++. + +.++++++|.|+.
T Consensus 211 ~Gk~VlViG-~G~IG~~vA~~lr-~~Ga~ViV~d~dp~ra~~A~~~G~~v~-----~---l~eal~~aDVVI~ 273 (425)
T PRK05476 211 AGKVVVVAG-YGDVGKGCAQRLR-GLGARVIVTEVDPICALQAAMDGFRVM-----T---MEEAAELGDIFVT 273 (425)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-hCCCEEEEEcCCchhhHHHHhcCCEec-----C---HHHHHhCCCEEEE
Confidence 578999999 6999999999998 678899999988765321 11233321 2 4566777875543
No 458
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=94.07 E-value=1.1 Score=36.06 Aligned_cols=36 Identities=19% Similarity=0.337 Sum_probs=29.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCe-EEEEecCCc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWK-VYGIARKPE 64 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~ 64 (303)
+..+|+|.|++| +|+++++.|. ..|.. +++++.+.-
T Consensus 18 ~~s~VlviG~gg-lGsevak~L~-~~GVg~i~lvD~d~v 54 (198)
T cd01485 18 RSAKVLIIGAGA-LGAEIAKNLV-LAGIDSITIVDHRLV 54 (198)
T ss_pred hhCcEEEECCCH-HHHHHHHHHH-HcCCCEEEEEECCcC
Confidence 467999999655 9999999999 56766 999987643
No 459
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=94.07 E-value=0.15 Score=46.47 Aligned_cols=63 Identities=19% Similarity=0.169 Sum_probs=44.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCcee
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLEDVT 97 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~ 97 (303)
...+++|+|+| .|.||+.+++.|. ..|.+|++..+++.... ....++++. .+.++++.+|.|+
T Consensus 251 ~LaGKtVgVIG-~G~IGr~vA~rL~-a~Ga~ViV~e~dp~~a~~A~~~G~~~~--------~leell~~ADIVI 314 (476)
T PTZ00075 251 MIAGKTVVVCG-YGDVGKGCAQALR-GFGARVVVTEIDPICALQAAMEGYQVV--------TLEDVVETADIFV 314 (476)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHH-HCCCEEEEEeCCchhHHHHHhcCceec--------cHHHHHhcCCEEE
Confidence 44689999999 7899999999998 68899999988765431 111233322 2556788888543
No 460
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=94.06 E-value=0.14 Score=47.92 Aligned_cols=65 Identities=17% Similarity=0.115 Sum_probs=45.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCc-eeEE
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLED-VTHI 99 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~-V~~~ 99 (303)
...+|+|.|.| .|.||+.+++.|. .-|.+|++.+|..........++... ++.++++.+|. ++|+
T Consensus 137 ~l~gktvgIiG-~G~IG~~vA~~l~-~fG~~V~~~d~~~~~~~~~~~g~~~~--------~l~ell~~aDiV~l~l 202 (526)
T PRK13581 137 ELYGKTLGIIG-LGRIGSEVAKRAK-AFGMKVIAYDPYISPERAAQLGVELV--------SLDELLARADFITLHT 202 (526)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHH-hCCCEEEEECCCCChhHHHhcCCEEE--------cHHHHHhhCCEEEEcc
Confidence 34689999999 7999999999998 78999999998643222111233221 36678888884 4444
No 461
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=94.00 E-value=0.037 Score=47.58 Aligned_cols=35 Identities=20% Similarity=0.390 Sum_probs=30.4
Q ss_pred EEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 30 VAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 30 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
+|.|+| .|.+|..+++.|+ ..|++|++.+|++.+.
T Consensus 1 ~IgvIG-~G~mG~~iA~~l~-~~G~~V~~~dr~~~~~ 35 (291)
T TIGR01505 1 KVGFIG-LGIMGSPMSINLA-KAGYQLHVTTIGPEVA 35 (291)
T ss_pred CEEEEE-ecHHHHHHHHHHH-HCCCeEEEEcCCHHHH
Confidence 478898 7999999999999 6899999999987553
No 462
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=93.95 E-value=0.11 Score=46.42 Aligned_cols=69 Identities=14% Similarity=0.137 Sum_probs=51.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEE
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
..+++|||+| .|-+|.-+++.|. ..|. +|++..|+..+.......+. ++....+.+...+..+|+||-.
T Consensus 176 L~~~~vlvIG-AGem~~lva~~L~-~~g~~~i~IaNRT~erA~~La~~~~---~~~~~l~el~~~l~~~DvViss 245 (414)
T COG0373 176 LKDKKVLVIG-AGEMGELVAKHLA-EKGVKKITIANRTLERAEELAKKLG---AEAVALEELLEALAEADVVISS 245 (414)
T ss_pred cccCeEEEEc-ccHHHHHHHHHHH-hCCCCEEEEEcCCHHHHHHHHHHhC---CeeecHHHHHHhhhhCCEEEEe
Confidence 4678999999 5999999999999 5674 58888898777542222222 5566667788899999966655
No 463
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=93.94 E-value=0.28 Score=40.84 Aligned_cols=66 Identities=15% Similarity=0.230 Sum_probs=45.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCe-EEEEecCCcccc---------ccCCCeE------------EEEecCCCHHH
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWK-VYGIARKPEITA---------IQSSSYC------------FISCDLLNPLD 85 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~~---------~~~~~~~------------~~~~D~~~~~~ 85 (303)
+.+|.|.|++|-+|+.+++.+....+++ +-+++|.++... ....++. -+..|.+.|+.
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~~~~g~d~ge~~g~~~~gv~v~~~~~~~~~~~DV~IDFT~P~~ 81 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGSLSLGSDAGELAGLGLLGVPVTDDLLLVKADADVLIDFTTPEA 81 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCccccccchhhhccccccCceeecchhhcccCCCEEEECCCchh
Confidence 4689999999999999999998667788 667777765321 0011111 24578888887
Q ss_pred HHHHHhcc
Q 042242 86 IKRKLTLL 93 (303)
Q Consensus 86 l~~~~~~~ 93 (303)
..+.++-+
T Consensus 82 ~~~~l~~~ 89 (266)
T COG0289 82 TLENLEFA 89 (266)
T ss_pred hHHHHHHH
Confidence 66655543
No 464
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.89 E-value=0.24 Score=42.16 Aligned_cols=54 Identities=17% Similarity=0.161 Sum_probs=41.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEe
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIF 100 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~ 100 (303)
..+|+|+|.|.|..+|+.++..|+ ..+..|+.+..+. ..+.+.++.+|.|+-..
T Consensus 156 l~Gk~vvViGrS~iVG~Pla~lL~-~~~atVt~chs~t--------------------~~l~~~~~~ADIvI~Av 209 (284)
T PRK14190 156 ISGKHVVVVGRSNIVGKPVGQLLL-NENATVTYCHSKT--------------------KNLAELTKQADILIVAV 209 (284)
T ss_pred CCCCEEEEECCCCccHHHHHHHHH-HCCCEEEEEeCCc--------------------hhHHHHHHhCCEEEEec
Confidence 368999999999999999999998 6777888754321 23667888888555544
No 465
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.87 E-value=0.22 Score=42.34 Aligned_cols=55 Identities=22% Similarity=0.176 Sum_probs=40.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEee
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
..+|+|+|.|.|..+|+.++..|+ +.+..|+...++.. .+.+..+.+|.|+-.++
T Consensus 153 l~Gk~vvViGrS~iVGkPla~lL~-~~~aTVtichs~T~--------------------~l~~~~~~ADIvIsAvG 207 (287)
T PRK14173 153 LAGKEVVVVGRSNIVGKPLAALLL-REDATVTLAHSKTQ--------------------DLPAVTRRADVLVVAVG 207 (287)
T ss_pred CCCCEEEEECCCCccHHHHHHHHH-HCCCEEEEeCCCCC--------------------CHHHHHhhCCEEEEecC
Confidence 367999999999999999999998 67778886654431 15567777885554433
No 466
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=93.86 E-value=0.2 Score=38.72 Aligned_cols=34 Identities=24% Similarity=0.171 Sum_probs=29.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEec
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIAR 61 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r 61 (303)
..+++|+|.| .|-+|...++.|+ +.|++|++++.
T Consensus 11 l~~~~vlVvG-GG~va~rka~~Ll-~~ga~V~VIsp 44 (157)
T PRK06719 11 LHNKVVVIIG-GGKIAYRKASGLK-DTGAFVTVVSP 44 (157)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHH-hCCCEEEEEcC
Confidence 3578999999 6999999999999 68999998854
No 467
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=93.84 E-value=0.63 Score=41.24 Aligned_cols=36 Identities=17% Similarity=0.089 Sum_probs=30.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCe-EEEEecCC
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWK-VYGIARKP 63 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~-V~~~~r~~ 63 (303)
.+.++|+|.| .|.+|+++++.|. ..|.. +++++.+.
T Consensus 26 L~~~~VlivG-~GGlGs~~a~~La-~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 26 LFDAKVAVIG-AGGLGSPALLYLA-GAGVGHITIIDDDT 62 (355)
T ss_pred HhCCeEEEEC-CCHHHHHHHHHHH-HcCCCeEEEEeCCE
Confidence 3567999999 5999999999998 67776 99998764
No 468
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=93.83 E-value=0.22 Score=43.39 Aligned_cols=65 Identities=23% Similarity=0.237 Sum_probs=46.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCc-eeEE
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLED-VTHI 99 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~-V~~~ 99 (303)
...+|++.|+| .|-||+.+++.+. .-|.+|...+|++.+......+..++ + +.++++.+|. ++|+
T Consensus 143 ~l~gktvGIiG-~GrIG~avA~r~~-~Fgm~v~y~~~~~~~~~~~~~~~~y~-----~---l~ell~~sDii~l~~ 208 (324)
T COG1052 143 DLRGKTLGIIG-LGRIGQAVARRLK-GFGMKVLYYDRSPNPEAEKELGARYV-----D---LDELLAESDIISLHC 208 (324)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHh-cCCCEEEEECCCCChHHHhhcCceec-----c---HHHHHHhCCEEEEeC
Confidence 44689999999 8999999999998 67888999999875211111122222 2 6688999984 4444
No 469
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=93.83 E-value=0.034 Score=47.59 Aligned_cols=38 Identities=21% Similarity=0.268 Sum_probs=32.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCccc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPEIT 66 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~ 66 (303)
..++|+|+| +|..|++++..|. ..|. +|++++|+..+.
T Consensus 126 ~~k~vlIlG-aGGaaraia~aL~-~~G~~~I~I~nR~~~ka 164 (284)
T PRK12549 126 SLERVVQLG-AGGAGAAVAHALL-TLGVERLTIFDVDPARA 164 (284)
T ss_pred cCCEEEEEC-CcHHHHHHHHHHH-HcCCCEEEEECCCHHHH
Confidence 457999999 5889999999998 5777 599999987654
No 470
>PLN03139 formate dehydrogenase; Provisional
Probab=93.83 E-value=0.1 Score=46.57 Aligned_cols=62 Identities=16% Similarity=0.086 Sum_probs=44.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc-cCCCeEEEEecCCCHHHHHHHHhccCc
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI-QSSSYCFISCDLLNPLDIKRKLTLLED 95 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~D~~~~~~l~~~~~~~~~ 95 (303)
...+|+|.|+| .|-||+.+++.|. .-|.+|++.+|....... ...++. -.++++++++.+|+
T Consensus 196 ~L~gktVGIVG-~G~IG~~vA~~L~-afG~~V~~~d~~~~~~~~~~~~g~~-------~~~~l~ell~~sDv 258 (386)
T PLN03139 196 DLEGKTVGTVG-AGRIGRLLLQRLK-PFNCNLLYHDRLKMDPELEKETGAK-------FEEDLDAMLPKCDV 258 (386)
T ss_pred CCCCCEEEEEe-ecHHHHHHHHHHH-HCCCEEEEECCCCcchhhHhhcCce-------ecCCHHHHHhhCCE
Confidence 45689999999 7999999999998 689999998886432111 111111 12357788888885
No 471
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=93.78 E-value=0.091 Score=45.97 Aligned_cols=37 Identities=16% Similarity=0.204 Sum_probs=29.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI 65 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 65 (303)
+.+|||+||+|.+|+..++.+. ..|+.+++++.++.+
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk-~~G~~~v~~~~s~~k 179 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAK-ALGATVVAVVSSSEK 179 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHH-HcCCcEEEEecCHHH
Confidence 6799999999999999999887 677676666655443
No 472
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=93.78 E-value=0.4 Score=38.81 Aligned_cols=35 Identities=20% Similarity=0.209 Sum_probs=30.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKP 63 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~ 63 (303)
..++|+|.| .|.+|+.+++.|. ..|. ++++++++.
T Consensus 20 ~~~~VlviG-~GglGs~ia~~La-~~Gv~~i~lvD~d~ 55 (202)
T TIGR02356 20 LNSHVLIIG-AGGLGSPAALYLA-GAGVGTIVIVDDDH 55 (202)
T ss_pred cCCCEEEEC-CCHHHHHHHHHHH-HcCCCeEEEecCCE
Confidence 567999999 7999999999998 5776 599999873
No 473
>PRK08605 D-lactate dehydrogenase; Validated
Probab=93.77 E-value=0.12 Score=45.36 Aligned_cols=63 Identities=19% Similarity=0.158 Sum_probs=43.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCcee
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVT 97 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~ 97 (303)
...+++|.|+| .|.||+.+++.|.+..|.+|++.+|...... ... +. -..++.++++.+|.|+
T Consensus 143 ~l~g~~VgIIG-~G~IG~~vA~~L~~~~g~~V~~~d~~~~~~~--~~~-----~~--~~~~l~ell~~aDvIv 205 (332)
T PRK08605 143 SIKDLKVAVIG-TGRIGLAVAKIFAKGYGSDVVAYDPFPNAKA--ATY-----VD--YKDTIEEAVEGADIVT 205 (332)
T ss_pred eeCCCEEEEEC-CCHHHHHHHHHHHhcCCCEEEEECCCccHhH--Hhh-----cc--ccCCHHHHHHhCCEEE
Confidence 44678999999 7999999999995246888998887654321 011 11 1124678888888533
No 474
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=93.68 E-value=0.15 Score=44.49 Aligned_cols=64 Identities=14% Similarity=0.100 Sum_probs=44.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc--ccCCCeEEEEecCCCHHHHHHHHhccCceeEE
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA--IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
..+++|.|+| .|.+|.++++.|. ..|++|++..|+..+.. ....++.. . ++.++++.+|.|+.+
T Consensus 15 L~gktIgIIG-~GsmG~AlA~~L~-~sG~~Vvv~~r~~~~s~~~A~~~G~~~-----~---s~~eaa~~ADVVvLa 80 (330)
T PRK05479 15 IKGKKVAIIG-YGSQGHAHALNLR-DSGVDVVVGLREGSKSWKKAEADGFEV-----L---TVAEAAKWADVIMIL 80 (330)
T ss_pred hCCCEEEEEe-eHHHHHHHHHHHH-HCCCEEEEEECCchhhHHHHHHCCCee-----C---CHHHHHhcCCEEEEc
Confidence 4568999999 7999999999998 68999988777654432 11223322 1 355678888844433
No 475
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.63 E-value=0.26 Score=41.74 Aligned_cols=37 Identities=27% Similarity=0.271 Sum_probs=30.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecC
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARK 62 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~ 62 (303)
+..+|+|+|.|.+..+|+.++..|+ ..+..|+...++
T Consensus 155 ~l~Gk~vvViGrS~~VGkPla~lL~-~~~AtVt~chs~ 191 (278)
T PRK14172 155 DIEGKEVVVIGRSNIVGKPVAQLLL-NENATVTICHSK 191 (278)
T ss_pred CCCCCEEEEECCCccchHHHHHHHH-HCCCEEEEeCCC
Confidence 3468999999999999999999998 677778776543
No 476
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=93.60 E-value=0.18 Score=46.33 Aligned_cols=36 Identities=14% Similarity=0.085 Sum_probs=31.0
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcC--CCeEEEEecCCccc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTA--NWKVYGIARKPEIT 66 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~--g~~V~~~~r~~~~~ 66 (303)
++|.|.| .|++|..++..|. .. |++|++++.++.+.
T Consensus 2 m~I~ViG-~GyvGl~~A~~lA-~~g~g~~V~gvD~~~~~v 39 (473)
T PLN02353 2 VKICCIG-AGYVGGPTMAVIA-LKCPDIEVVVVDISVPRI 39 (473)
T ss_pred CEEEEEC-CCHHHHHHHHHHH-hcCCCCeEEEEECCHHHH
Confidence 5799998 8999999999998 44 68899999887664
No 477
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=93.59 E-value=0.15 Score=44.59 Aligned_cols=36 Identities=25% Similarity=0.342 Sum_probs=28.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhh--cCCCeEEEEecC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLIS--TANWKVYGIARK 62 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~--~~g~~V~~~~r~ 62 (303)
+..+|.|.||||++|..+++.|.. ....++..++.+
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~ 40 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASE 40 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEcc
Confidence 356999999999999999999983 245567766654
No 478
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.58 E-value=0.26 Score=41.86 Aligned_cols=36 Identities=28% Similarity=0.360 Sum_probs=30.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecC
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARK 62 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~ 62 (303)
..+|+|+|.|.+..+|+.++..|+ +++..|+.+.++
T Consensus 156 l~Gk~vvViGrS~~VGkPla~lL~-~~~ATVt~chs~ 191 (282)
T PRK14180 156 TEGAYAVVVGASNVVGKPVSQLLL-NAKATVTTCHRF 191 (282)
T ss_pred CCCCEEEEECCCCcchHHHHHHHH-HCCCEEEEEcCC
Confidence 368999999999999999999998 677788776544
No 479
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=93.55 E-value=0.098 Score=45.10 Aligned_cols=36 Identities=17% Similarity=0.345 Sum_probs=31.8
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
++|.|+| .|.+|..+++.|+ +.|++|++.+|++.+.
T Consensus 2 ~~Ig~IG-lG~mG~~mA~~l~-~~G~~V~v~d~~~~~~ 37 (296)
T PRK15461 2 AAIAFIG-LGQMGSPMASNLL-KQGHQLQVFDVNPQAV 37 (296)
T ss_pred CeEEEEe-eCHHHHHHHHHHH-HCCCeEEEEcCCHHHH
Confidence 4799999 8999999999999 6899999999987654
No 480
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.48 E-value=0.29 Score=41.67 Aligned_cols=55 Identities=24% Similarity=0.144 Sum_probs=40.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEee
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
..+++|+|+|.+..+|+.++..|+ ..+..|+....+.. .+.+..+.+|.|+...+
T Consensus 162 l~Gk~vvViGrs~iVGkPla~lL~-~~~atVtv~hs~T~--------------------~l~~~~~~ADIvv~AvG 216 (287)
T PRK14176 162 IEGKNAVIVGHSNVVGKPMAAMLL-NRNATVSVCHVFTD--------------------DLKKYTLDADILVVATG 216 (287)
T ss_pred CCCCEEEEECCCcccHHHHHHHHH-HCCCEEEEEeccCC--------------------CHHHHHhhCCEEEEccC
Confidence 357899999999999999999998 67878877664321 25567777775555433
No 481
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.47 E-value=0.29 Score=41.61 Aligned_cols=54 Identities=22% Similarity=0.095 Sum_probs=40.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEe
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIF 100 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~ 100 (303)
..+|+|+|.|.+..+|+.++..|+ ..|..|+++..+. ..+.+.++.+|.|+-..
T Consensus 155 l~Gk~vvVvGrs~~VG~Pla~lL~-~~gAtVtv~hs~t--------------------~~l~~~~~~ADIvV~Av 208 (285)
T PRK14191 155 IKGKDVVIIGASNIVGKPLAMLML-NAGASVSVCHILT--------------------KDLSFYTQNADIVCVGV 208 (285)
T ss_pred CCCCEEEEECCCchhHHHHHHHHH-HCCCEEEEEeCCc--------------------HHHHHHHHhCCEEEEec
Confidence 357999999999999999999998 6788887753221 23567888888554443
No 482
>PLN02494 adenosylhomocysteinase
Probab=93.47 E-value=0.21 Score=45.48 Aligned_cols=62 Identities=24% Similarity=0.229 Sum_probs=44.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCceeE
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLEDVTH 98 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~ 98 (303)
.+++|+|+| .|.||+.+++.+. ..|.+|+++.+++.+.. ....++.+. .+.++++.+|.|+.
T Consensus 253 aGKtVvViG-yG~IGr~vA~~ak-a~Ga~VIV~e~dp~r~~eA~~~G~~vv--------~leEal~~ADVVI~ 315 (477)
T PLN02494 253 AGKVAVICG-YGDVGKGCAAAMK-AAGARVIVTEIDPICALQALMEGYQVL--------TLEDVVSEADIFVT 315 (477)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-HCCCEEEEEeCCchhhHHHHhcCCeec--------cHHHHHhhCCEEEE
Confidence 578999999 7999999999998 67899999988875422 112334332 24567777775443
No 483
>KOG4288 consensus Predicted oxidoreductase [General function prediction only]
Probab=93.47 E-value=0.1 Score=42.39 Aligned_cols=71 Identities=18% Similarity=0.272 Sum_probs=45.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccccc----CCCeE--EEEecCCCHHHHHHHHhccCceeEE
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQ----SSSYC--FISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~----~~~~~--~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
.++..++|++||+|..+++.+. ..||+|.-+.|+....+.. ..+++ ....+.-|+.+...+++.+..+.|-
T Consensus 2 i~k~~vfgg~gflg~~ic~~a~-~sgy~vvsvsrsgas~~snkid~~~dve~e~tlvlggnpfsgs~vlk~A~~vv~s 78 (283)
T KOG4288|consen 2 IPKLIVFGGNGFLGKRICQEAV-TSGYQVVSVSRSGASPHSNKIDDKQDVEVEWTLVLGGNPFSGSEVLKNATNVVHS 78 (283)
T ss_pred CccceeecccccchhhhhHHHH-hcCceEEEeccccCCCcCCCCcchhhhhHHHHhhhcCCCcchHHHHHHHHhhcee
Confidence 4578899999999999999999 5799999999987653311 11122 1223334444555566555444444
No 484
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=93.45 E-value=0.054 Score=49.96 Aligned_cols=38 Identities=21% Similarity=0.185 Sum_probs=32.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI 65 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 65 (303)
..+++++|+| +|.+|+.++..|. ..|++|++.+|+..+
T Consensus 330 ~~~k~vlIiG-aGgiG~aia~~L~-~~G~~V~i~~R~~~~ 367 (477)
T PRK09310 330 LNNQHVAIVG-AGGAAKAIATTLA-RAGAELLIFNRTKAH 367 (477)
T ss_pred cCCCEEEEEc-CcHHHHHHHHHHH-HCCCEEEEEeCCHHH
Confidence 3467999999 5899999999999 688899998887654
No 485
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.45 E-value=0.3 Score=41.50 Aligned_cols=36 Identities=28% Similarity=0.233 Sum_probs=30.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecC
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARK 62 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~ 62 (303)
..+|+|+|.|.+..+|+.++..|+ ..+..|+....+
T Consensus 157 l~Gk~vvViGrS~iVGkPla~lL~-~~~atVt~chs~ 192 (284)
T PRK14177 157 VTGKNAVVVGRSPILGKPMAMLLT-EMNATVTLCHSK 192 (284)
T ss_pred CCCCEEEEECCCCcchHHHHHHHH-HCCCEEEEeCCC
Confidence 467999999999999999999998 677778776543
No 486
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=93.45 E-value=0.11 Score=44.11 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=31.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI 65 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 65 (303)
..++++|+|+ |.+|+.++..|. ..|++|++++|++.+
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~-~~g~~v~v~~R~~~~ 152 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLL-KADCNVIIANRTVSK 152 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHH-HCCCEEEEEeCCHHH
Confidence 3579999996 899999999998 578899999988654
No 487
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.39 E-value=0.29 Score=41.86 Aligned_cols=56 Identities=27% Similarity=0.153 Sum_probs=40.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEee
Q 042242 25 VDAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 25 ~~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
+..+|+|+|.|.|..+|+.++..|+ .++..|+.+..+.. .+.+..+.+|.|+-.++
T Consensus 155 ~l~Gk~vvVIGrS~iVGkPla~lL~-~~~atVtv~hs~T~--------------------~l~~~~~~ADIvIsAvG 210 (297)
T PRK14186 155 DIAGKKAVVVGRSILVGKPLALMLL-AANATVTIAHSRTQ--------------------DLASITREADILVAAAG 210 (297)
T ss_pred CCCCCEEEEECCCccchHHHHHHHH-HCCCEEEEeCCCCC--------------------CHHHHHhhCCEEEEccC
Confidence 3467999999999999999999998 67778877643321 25567777885544433
No 488
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.38 E-value=0.3 Score=41.48 Aligned_cols=55 Identities=20% Similarity=0.180 Sum_probs=40.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEee
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
..+|+|+|.|.+..+|+.++..|+ +.+..|+....+.. .+.+.++.+|.|+-.++
T Consensus 155 l~Gk~vvVvGrS~iVGkPla~lL~-~~~atVtichs~T~--------------------~l~~~~~~ADIvI~AvG 209 (284)
T PRK14170 155 IEGKRAVVIGRSNIVGKPVAQLLL-NENATVTIAHSRTK--------------------DLPQVAKEADILVVATG 209 (284)
T ss_pred CCCCEEEEECCCCcchHHHHHHHH-HCCCEEEEeCCCCC--------------------CHHHHHhhCCEEEEecC
Confidence 468999999999999999999998 67778876543321 15567777875544433
No 489
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=93.30 E-value=0.23 Score=44.76 Aligned_cols=63 Identities=22% Similarity=0.197 Sum_probs=44.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcccc-ccCCCeEEEEecCCCHHHHHHHHhccCceeEE
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITA-IQSSSYCFISCDLLNPLDIKRKLTLLEDVTHI 99 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~ 99 (303)
.+++|+|+| .|.||..+++.+. ..|.+|+++++++.+.. ....++.++ + +.+.++++|.|+.+
T Consensus 201 ~GktVvViG-~G~IG~~va~~ak-~~Ga~ViV~d~d~~R~~~A~~~G~~~~-----~---~~e~v~~aDVVI~a 264 (413)
T cd00401 201 AGKVAVVAG-YGDVGKGCAQSLR-GQGARVIVTEVDPICALQAAMEGYEVM-----T---MEEAVKEGDIFVTT 264 (413)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-HCCCEEEEEECChhhHHHHHhcCCEEc-----c---HHHHHcCCCEEEEC
Confidence 578999999 6999999999998 67889999988876532 122344332 1 23566777755543
No 490
>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]
Probab=93.29 E-value=0.39 Score=40.95 Aligned_cols=64 Identities=17% Similarity=0.236 Sum_probs=48.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccc-cCCCeEEEEecCCCHHHHHHHHhccC
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAI-QSSSYCFISCDLLNPLDIKRKLTLLE 94 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~D~~~~~~l~~~~~~~~ 94 (303)
...||+++| +|=+|+.++-.+. .-|.+|++++|=...... -..+ -..+|..|.+.++.+++..+
T Consensus 11 ~a~kvmLLG-SGELGKEvaIe~Q-RLG~eViAVDrY~~APAmqVAhr--s~Vi~MlD~~al~avv~rek 75 (394)
T COG0027 11 QATKVMLLG-SGELGKEVAIEAQ-RLGVEVIAVDRYANAPAMQVAHR--SYVIDMLDGDALRAVVEREK 75 (394)
T ss_pred CCeEEEEec-CCccchHHHHHHH-hcCCEEEEecCcCCChhhhhhhh--eeeeeccCHHHHHHHHHhhC
Confidence 346899999 8999999999997 789999999996544321 1111 23479999999998887654
No 491
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.28 E-value=0.097 Score=44.93 Aligned_cols=36 Identities=19% Similarity=0.344 Sum_probs=31.8
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEIT 66 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 66 (303)
++|.|+| .|.+|..++..|+ ..|++|++.++++...
T Consensus 2 ~~V~VIG-~G~mG~~iA~~la-~~G~~V~~~d~~~~~~ 37 (288)
T PRK09260 2 EKLVVVG-AGVMGRGIAYVFA-VSGFQTTLVDIKQEQL 37 (288)
T ss_pred cEEEEEC-ccHHHHHHHHHHH-hCCCcEEEEeCCHHHH
Confidence 5899999 5999999999998 6899999999987653
No 492
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=93.28 E-value=0.18 Score=40.82 Aligned_cols=36 Identities=22% Similarity=0.158 Sum_probs=31.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCC
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKP 63 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 63 (303)
..+++|+|+|| |-+|...++.|+ +.|++|+++++..
T Consensus 8 l~~k~vLVIGg-G~va~~ka~~Ll-~~ga~V~VIs~~~ 43 (202)
T PRK06718 8 LSNKRVVIVGG-GKVAGRRAITLL-KYGAHIVVISPEL 43 (202)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHH-HCCCeEEEEcCCC
Confidence 45789999994 999999999999 6788999998754
No 493
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=93.27 E-value=0.2 Score=44.19 Aligned_cols=27 Identities=22% Similarity=0.444 Sum_probs=22.8
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCe
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWK 55 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~ 55 (303)
++|.|.||||.+|+.+++.|..++.+.
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp 27 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFD 27 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCc
Confidence 479999999999999999998445654
No 494
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=93.23 E-value=0.24 Score=44.53 Aligned_cols=38 Identities=26% Similarity=0.215 Sum_probs=33.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI 65 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 65 (303)
..+++|+|+| .|.||+.+++.+. ..|.+|+++++++.+
T Consensus 193 l~Gk~VvViG-~G~IG~~vA~~ak-~~Ga~ViV~d~dp~r 230 (406)
T TIGR00936 193 IAGKTVVVAG-YGWCGKGIAMRAR-GMGARVIVTEVDPIR 230 (406)
T ss_pred CCcCEEEEEC-CCHHHHHHHHHHh-hCcCEEEEEeCChhh
Confidence 4578999999 7999999999998 688999999988755
No 495
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.23 E-value=0.33 Score=41.22 Aligned_cols=35 Identities=26% Similarity=0.278 Sum_probs=29.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEec
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIAR 61 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r 61 (303)
..+|+|+|.|.|..+|+.++..|+ +.+..|+....
T Consensus 154 l~Gk~vvViGrS~iVGkPla~lL~-~~~atVtichs 188 (282)
T PRK14169 154 VAGKRVVIVGRSNIVGRPLAGLMV-NHDATVTIAHS 188 (282)
T ss_pred CCCCEEEEECCCccchHHHHHHHH-HCCCEEEEECC
Confidence 367999999999999999999998 67878876643
No 496
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=93.21 E-value=0.13 Score=44.38 Aligned_cols=35 Identities=26% Similarity=0.316 Sum_probs=30.5
Q ss_pred CEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc
Q 042242 29 NVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI 65 (303)
Q Consensus 29 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 65 (303)
++|.|.| +|-+|..++..|. ..|++|++++|++..
T Consensus 1 m~I~IiG-~G~~G~~~a~~L~-~~g~~V~~~~r~~~~ 35 (304)
T PRK06522 1 MKIAILG-AGAIGGLFGAALA-QAGHDVTLVARRGAH 35 (304)
T ss_pred CEEEEEC-CCHHHHHHHHHHH-hCCCeEEEEECChHH
Confidence 3799999 5999999999998 678999999996544
No 497
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.19 E-value=0.32 Score=41.31 Aligned_cols=55 Identities=22% Similarity=0.163 Sum_probs=40.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCccccccCCCeEEEEecCCCHHHHHHHHhccCceeEEee
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFW 101 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~V~~~~~ 101 (303)
..+|+|+|.|.+..+|+.++..|+ +.+..|+.+.++.. .+.+..+.+|.|+-.++
T Consensus 155 l~Gk~vvVvGrS~iVGkPla~lL~-~~~atVt~chs~T~--------------------nl~~~~~~ADIvIsAvG 209 (282)
T PRK14166 155 LEGKDAVIIGASNIVGRPMATMLL-NAGATVSVCHIKTK--------------------DLSLYTRQADLIIVAAG 209 (282)
T ss_pred CCCCEEEEECCCCcchHHHHHHHH-HCCCEEEEeCCCCC--------------------CHHHHHhhCCEEEEcCC
Confidence 368999999999999999999998 67778886554431 15567777775444433
No 498
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.17 E-value=0.13 Score=44.30 Aligned_cols=36 Identities=17% Similarity=0.192 Sum_probs=32.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHhhcCCCeEEEEecCCcc
Q 042242 28 KNVAVIFGVTGLVGKELARRLISTANWKVYGIARKPEI 65 (303)
Q Consensus 28 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 65 (303)
.++|.|+| +|.+|..++..|+ ..|++|++.+|++..
T Consensus 4 ~~kI~vIG-aG~mG~~iA~~la-~~G~~V~l~d~~~~~ 39 (292)
T PRK07530 4 IKKVGVIG-AGQMGNGIAHVCA-LAGYDVLLNDVSADR 39 (292)
T ss_pred CCEEEEEC-CcHHHHHHHHHHH-HCCCeEEEEeCCHHH
Confidence 47899999 6999999999999 689999999998654
No 499
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=93.17 E-value=0.16 Score=43.54 Aligned_cols=36 Identities=14% Similarity=0.217 Sum_probs=29.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHhhcCCC-eEEEEecCCc
Q 042242 27 AKNVAVIFGVTGLVGKELARRLISTANW-KVYGIARKPE 64 (303)
Q Consensus 27 ~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~ 64 (303)
.+++++|+|+ |..+++++..|. ..|. +|+++.|++.
T Consensus 123 ~~k~vlvlGa-GGaarAi~~~l~-~~g~~~i~i~nRt~~ 159 (288)
T PRK12749 123 KGKTMVLLGA-GGASTAIGAQGA-IEGLKEIKLFNRRDE 159 (288)
T ss_pred CCCEEEEECC-cHHHHHHHHHHH-HCCCCEEEEEeCCcc
Confidence 4679999995 666999999998 5665 5999999853
No 500
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=93.09 E-value=0.77 Score=41.06 Aligned_cols=35 Identities=17% Similarity=0.136 Sum_probs=29.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHhhcCCCe-EEEEecC
Q 042242 26 DAKNVAVIFGVTGLVGKELARRLISTANWK-VYGIARK 62 (303)
Q Consensus 26 ~~~~~vlVtGatG~iG~~l~~~L~~~~g~~-V~~~~r~ 62 (303)
.+.++|+|.| .|.+|++++..|. ..|.. +++++++
T Consensus 133 l~~~~VlvvG-~GG~Gs~ia~~La-~~Gvg~i~lvD~d 168 (376)
T PRK08762 133 LLEARVLLIG-AGGLGSPAALYLA-AAGVGTLGIVDHD 168 (376)
T ss_pred HhcCcEEEEC-CCHHHHHHHHHHH-HcCCCeEEEEeCC
Confidence 3567999998 5889999999998 57775 9999987
Done!